Query 047355
Match_columns 312
No_of_seqs 241 out of 2191
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 18:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047355.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047355hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 5.8E-56 2E-60 374.9 40.8 299 5-303 1-302 (304)
2 1vyh_C Platelet-activating fac 100.0 2.2E-52 7.6E-57 367.2 38.8 289 11-301 102-408 (410)
3 3ow8_A WD repeat-containing pr 100.0 1.6E-50 5.5E-55 344.1 39.8 287 11-301 26-318 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 6.2E-50 2.1E-54 343.2 42.6 289 7-300 45-339 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 1.9E-49 6.4E-54 342.0 41.9 290 8-300 55-353 (354)
6 3frx_A Guanine nucleotide-bind 100.0 9.9E-49 3.4E-53 332.8 40.0 297 1-303 1-316 (319)
7 3iz6_a 40S ribosomal protein R 100.0 5.3E-50 1.8E-54 348.7 32.3 295 6-303 55-374 (380)
8 4gqb_B Methylosome protein 50; 100.0 8.4E-49 2.9E-53 336.3 36.2 285 15-304 28-331 (344)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-47 7.4E-52 328.0 38.0 295 7-304 5-335 (345)
10 4ery_A WD repeat-containing pr 100.0 5E-47 1.7E-51 321.0 39.7 291 9-303 15-311 (312)
11 4g56_B MGC81050 protein; prote 100.0 7.1E-48 2.4E-52 332.5 34.4 288 13-305 38-344 (357)
12 2hes_X YDR267CP; beta-propelle 100.0 3.9E-47 1.3E-51 324.5 35.9 292 8-303 5-327 (330)
13 2xzm_R RACK1; ribosome, transl 100.0 1.1E-46 3.8E-51 323.3 38.1 294 5-303 9-339 (343)
14 1erj_A Transcriptional repress 100.0 3.6E-46 1.2E-50 326.0 40.0 284 15-303 62-388 (393)
15 1nr0_A Actin interacting prote 100.0 7.1E-46 2.4E-50 341.6 40.8 290 11-304 141-567 (611)
16 4aow_A Guanine nucleotide-bind 100.0 8.7E-45 3E-49 310.1 40.1 294 6-303 27-336 (340)
17 1nr0_A Actin interacting prote 100.0 9.7E-45 3.3E-49 334.0 37.2 284 16-305 17-356 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 3.3E-44 1.1E-48 328.0 40.1 280 11-300 297-576 (577)
19 3mkq_A Coatomer beta'-subunit; 100.0 4.7E-44 1.6E-48 339.4 39.1 298 5-302 1-301 (814)
20 3dm0_A Maltose-binding peripla 100.0 8.5E-44 2.9E-48 332.5 39.7 288 11-302 376-691 (694)
21 3ow8_A WD repeat-containing pr 100.0 8.5E-44 2.9E-48 302.6 35.0 248 10-261 73-320 (321)
22 1sq9_A Antiviral protein SKI8; 100.0 8E-44 2.7E-48 310.7 35.7 290 7-303 6-394 (397)
23 3zwl_B Eukaryotic translation 100.0 7.9E-43 2.7E-47 300.7 40.2 289 11-304 26-346 (369)
24 4gqb_B Methylosome protein 50; 100.0 1.7E-43 5.9E-48 303.3 35.3 246 15-265 80-334 (344)
25 1vyh_C Platelet-activating fac 100.0 4.4E-44 1.5E-48 314.4 32.3 248 10-260 143-409 (410)
26 3k26_A Polycomb protein EED; W 100.0 7.8E-44 2.7E-48 306.9 32.4 284 13-302 14-364 (366)
27 3odt_A Protein DOA1; ubiquitin 100.0 8.2E-43 2.8E-47 294.3 37.3 286 7-305 8-297 (313)
28 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-42 6.2E-47 299.3 36.7 286 14-303 5-360 (372)
29 1gxr_A ESG1, transducin-like e 100.0 1E-41 3.5E-46 290.4 39.7 281 13-301 47-334 (337)
30 2pm9_A Protein WEB1, protein t 100.0 8.6E-44 2.9E-48 312.2 27.2 286 15-303 65-413 (416)
31 2ynn_A Coatomer subunit beta'; 100.0 3E-42 1E-46 291.0 35.5 252 50-305 4-260 (304)
32 2ymu_A WD-40 repeat protein; u 100.0 6.8E-42 2.3E-46 312.7 40.7 282 11-302 256-537 (577)
33 3i2n_A WD repeat-containing pr 100.0 5.2E-43 1.8E-47 300.9 31.0 290 12-305 13-354 (357)
34 1r5m_A SIR4-interacting protei 100.0 4.2E-42 1.4E-46 301.7 37.4 283 15-302 43-423 (425)
35 3ei3_B DNA damage-binding prot 100.0 2.2E-42 7.4E-47 300.7 34.0 285 10-303 66-381 (383)
36 2pm7_B Protein transport prote 100.0 6.4E-42 2.2E-46 288.0 34.0 248 12-261 4-284 (297)
37 3gre_A Serine/threonine-protei 100.0 3.9E-42 1.3E-46 304.2 33.6 287 11-301 56-437 (437)
38 1got_B GT-beta; complex (GTP-b 100.0 2.9E-41 9.8E-46 289.3 36.6 243 12-259 92-340 (340)
39 4g56_B MGC81050 protein; prote 100.0 4.8E-42 1.7E-46 296.0 31.8 248 12-263 89-344 (357)
40 2pm9_A Protein WEB1, protein t 100.0 1E-42 3.5E-47 305.4 25.9 289 16-307 11-340 (416)
41 2j04_B YDR362CP, TAU91; beta p 100.0 7E-43 2.4E-47 314.2 25.2 285 16-304 132-517 (524)
42 3dw8_B Serine/threonine-protei 100.0 1.7E-41 5.9E-46 300.4 33.0 280 15-298 26-441 (447)
43 4e54_B DNA damage-binding prot 100.0 5.8E-42 2E-46 303.2 29.9 288 12-304 114-430 (435)
44 3vl1_A 26S proteasome regulato 100.0 1.9E-41 6.6E-46 297.9 32.2 282 19-304 58-365 (420)
45 3dwl_C Actin-related protein 2 100.0 6E-43 2.1E-47 303.4 21.0 281 15-300 9-375 (377)
46 1yfq_A Cell cycle arrest prote 100.0 5.2E-41 1.8E-45 287.0 32.5 274 13-296 7-315 (342)
47 3bg1_A Protein SEC13 homolog; 100.0 9.4E-42 3.2E-46 289.4 27.0 250 10-261 6-292 (316)
48 4ery_A WD repeat-containing pr 100.0 2E-40 7E-45 280.4 34.7 251 10-261 58-311 (312)
49 2pm7_B Protein transport prote 100.0 1.2E-40 4.2E-45 280.1 33.0 250 54-303 4-284 (297)
50 2pbi_B Guanine nucleotide-bind 100.0 2.9E-40 9.8E-45 284.7 36.0 254 50-304 55-315 (354)
51 4gga_A P55CDC, cell division c 100.0 1E-39 3.5E-44 287.5 40.1 278 19-303 107-394 (420)
52 3iz6_a 40S ribosomal protein R 100.0 5.8E-42 2E-46 298.0 24.9 265 38-303 45-328 (380)
53 4aez_A CDC20, WD repeat-contai 100.0 1.7E-40 5.9E-45 290.7 34.4 279 20-306 96-382 (401)
54 1p22_A F-BOX/WD-repeat protein 100.0 2.9E-40 9.9E-45 292.3 35.0 273 15-304 131-414 (435)
55 3v7d_B Cell division control p 100.0 1.5E-39 5.1E-44 289.7 38.8 282 12-305 116-422 (464)
56 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.9E-40 1.3E-44 282.9 33.4 251 14-267 58-340 (345)
57 4ggc_A P55CDC, cell division c 100.0 5.5E-39 1.9E-43 271.6 39.9 278 20-303 28-314 (318)
58 2hes_X YDR267CP; beta-propelle 100.0 3.6E-40 1.2E-44 281.4 31.9 244 16-262 57-328 (330)
59 3mmy_A MRNA export factor; mRN 100.0 1.2E-39 4E-44 280.8 35.1 282 9-296 31-338 (368)
60 3vl1_A 26S proteasome regulato 100.0 5.4E-40 1.9E-44 288.7 33.6 281 18-303 98-418 (420)
61 1erj_A Transcriptional repress 100.0 1.4E-39 4.8E-44 284.2 35.7 239 19-262 125-389 (393)
62 1gxr_A ESG1, transducin-like e 100.0 1.4E-39 4.7E-44 277.2 34.7 283 16-304 8-296 (337)
63 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-39 5.2E-44 321.4 39.7 289 12-304 610-1034(1249)
64 3frx_A Guanine nucleotide-bind 100.0 2.8E-39 9.5E-44 274.6 35.7 246 51-301 9-264 (319)
65 3v7d_B Cell division control p 100.0 6.8E-39 2.3E-43 285.5 39.5 283 10-304 155-463 (464)
66 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.3E-39 1.8E-43 284.9 38.1 271 10-296 152-430 (445)
67 1pgu_A Actin interacting prote 100.0 9.3E-39 3.2E-43 293.6 39.5 288 11-303 154-613 (615)
68 3f3f_A Nucleoporin SEH1; struc 100.0 3.6E-39 1.2E-43 275.2 33.2 257 9-267 3-342 (351)
69 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.4E-38 4.8E-43 282.2 37.7 276 12-304 113-391 (445)
70 4h5i_A Guanine nucleotide-exch 100.0 2.4E-39 8.3E-44 279.9 31.6 278 17-302 14-341 (365)
71 3bg1_A Protein SEC13 homolog; 100.0 4E-40 1.4E-44 279.4 26.2 250 54-303 8-292 (316)
72 3jrp_A Fusion protein of prote 100.0 4.5E-39 1.5E-43 278.4 32.4 252 9-262 3-287 (379)
73 2xzm_R RACK1; ribosome, transl 100.0 5.6E-39 1.9E-43 275.4 32.6 247 11-263 70-341 (343)
74 4a11_B DNA excision repair pro 100.0 1.7E-38 5.8E-43 277.4 36.2 290 12-305 38-366 (408)
75 1pgu_A Actin interacting prote 100.0 2.7E-38 9.4E-43 290.4 36.5 281 15-303 16-327 (615)
76 2oaj_A Protein SNI1; WD40 repe 100.0 2.6E-38 8.7E-43 302.0 37.0 204 14-223 14-245 (902)
77 2oaj_A Protein SNI1; WD40 repe 100.0 3E-38 1E-42 301.6 34.1 287 16-304 97-605 (902)
78 4gga_A P55CDC, cell division c 100.0 5.7E-37 2E-41 270.0 35.4 255 13-272 143-405 (420)
79 3k26_A Polycomb protein EED; W 100.0 4.9E-38 1.7E-42 270.6 27.9 244 16-262 68-366 (366)
80 3jrp_A Fusion protein of prote 100.0 3.6E-37 1.2E-41 266.4 32.1 253 51-303 3-286 (379)
81 3sfz_A APAF-1, apoptotic pepti 100.0 6.2E-38 2.1E-42 309.9 30.1 291 11-306 737-1160(1249)
82 4gq1_A NUP37; propeller, trans 100.0 8.2E-38 2.8E-42 273.0 27.2 286 17-304 15-390 (393)
83 4aez_A CDC20, WD repeat-contai 100.0 9.5E-37 3.3E-41 267.0 34.0 248 16-269 133-387 (401)
84 1sq9_A Antiviral protein SKI8; 100.0 2.9E-37 9.8E-42 269.2 30.5 250 9-263 54-396 (397)
85 3dwl_C Actin-related protein 2 100.0 2.4E-38 8.3E-43 274.4 23.5 245 54-302 6-280 (377)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-37 5.1E-42 272.1 27.4 283 19-307 36-345 (402)
87 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-36 5E-41 259.0 32.4 252 53-304 5-337 (351)
88 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-36 6.2E-41 261.0 32.9 277 12-303 14-335 (355)
89 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-36 8.4E-41 286.5 36.6 288 11-302 49-384 (814)
90 3dm0_A Maltose-binding peripla 100.0 2.2E-36 7.4E-41 282.4 34.6 246 11-262 424-693 (694)
91 3i2n_A WD repeat-containing pr 100.0 1.1E-36 3.7E-41 261.4 28.7 246 15-264 63-355 (357)
92 3zwl_B Eukaryotic translation 100.0 7.3E-36 2.5E-40 257.1 33.9 252 10-266 67-350 (369)
93 4aow_A Guanine nucleotide-bind 100.0 9.8E-36 3.3E-40 254.0 34.1 251 50-304 29-286 (340)
94 2xyi_A Probable histone-bindin 100.0 7E-36 2.4E-40 263.9 34.2 283 19-303 47-409 (430)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.9E-36 3.4E-40 264.4 35.3 270 18-292 5-373 (450)
96 1k8k_C P40, ARP2/3 complex 41 100.0 1E-35 3.5E-40 256.9 33.0 246 55-304 4-274 (372)
97 3jro_A Fusion protein of prote 100.0 6E-37 2E-41 288.3 27.2 251 10-262 2-285 (753)
98 3gre_A Serine/threonine-protei 100.0 4E-37 1.4E-41 272.0 24.4 272 24-307 34-362 (437)
99 3lrv_A PRE-mRNA-splicing facto 100.0 8.6E-37 2.9E-41 261.8 25.7 267 24-304 43-333 (343)
100 4h5i_A Guanine nucleotide-exch 100.0 1.5E-36 5.2E-41 262.4 25.9 243 13-262 69-343 (365)
101 2j04_B YDR362CP, TAU91; beta p 100.0 6.3E-37 2.2E-41 275.5 24.1 229 73-303 175-427 (524)
102 2xyi_A Probable histone-bindin 100.0 6.5E-36 2.2E-40 264.0 30.2 250 12-263 123-411 (430)
103 3odt_A Protein DOA1; ubiquitin 100.0 3.7E-35 1.3E-39 247.4 33.3 246 11-269 53-303 (313)
104 1r5m_A SIR4-interacting protei 100.0 5.9E-36 2E-40 262.5 29.2 245 11-261 143-424 (425)
105 4ggc_A P55CDC, cell division c 100.0 7.7E-35 2.6E-39 246.1 34.9 246 13-263 63-316 (318)
106 2j04_A TAU60, YPL007P, hypothe 100.0 1.8E-36 6.2E-41 268.0 24.6 259 17-303 15-296 (588)
107 4a11_B DNA excision repair pro 100.0 4.4E-35 1.5E-39 255.8 33.2 280 15-301 97-402 (408)
108 3ei3_B DNA damage-binding prot 100.0 4.8E-35 1.6E-39 254.4 29.1 251 46-305 60-340 (383)
109 1p22_A F-BOX/WD-repeat protein 100.0 4.7E-35 1.6E-39 258.9 26.8 240 10-265 166-417 (435)
110 4e54_B DNA damage-binding prot 100.0 2.3E-35 7.9E-40 260.9 24.5 252 12-266 159-434 (435)
111 3jro_A Fusion protein of prote 100.0 4.1E-35 1.4E-39 275.8 27.2 252 53-304 3-285 (753)
112 2j04_A TAU60, YPL007P, hypothe 100.0 6.2E-35 2.1E-39 258.2 25.0 260 12-293 47-350 (588)
113 3dw8_B Serine/threonine-protei 100.0 2E-34 7E-39 255.0 27.3 243 58-305 27-374 (447)
114 1yfq_A Cell cycle arrest prote 100.0 9.3E-34 3.2E-38 242.0 29.1 241 56-305 8-283 (342)
115 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-34 5.9E-39 252.6 24.5 249 11-265 75-345 (402)
116 4gq1_A NUP37; propeller, trans 100.0 1.1E-34 3.8E-39 253.2 22.6 242 19-261 91-388 (393)
117 3bws_A Protein LP49; two-domai 100.0 1.5E-32 5.2E-37 242.2 35.9 279 17-303 122-431 (433)
118 1l0q_A Surface layer protein; 100.0 4.6E-31 1.6E-35 229.6 37.3 266 30-304 3-275 (391)
119 3vu4_A KMHSV2; beta-propeller 100.0 5.2E-32 1.8E-36 233.1 30.3 246 43-303 3-270 (355)
120 2w18_A PALB2, fancn, partner a 100.0 6.7E-32 2.3E-36 225.3 29.7 276 19-301 41-354 (356)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-31 4E-36 238.2 32.7 242 15-261 100-390 (450)
122 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-32 6E-37 235.0 24.2 227 68-302 45-290 (343)
123 3mmy_A MRNA export factor; mRN 100.0 1.1E-31 3.6E-36 231.0 27.1 244 11-260 80-344 (368)
124 2w18_A PALB2, fancn, partner a 100.0 1.2E-31 4.1E-36 223.7 25.4 208 17-260 111-355 (356)
125 1l0q_A Surface layer protein; 100.0 1.6E-29 5.6E-34 219.9 38.1 249 17-273 31-286 (391)
126 3bws_A Protein LP49; two-domai 100.0 7.3E-29 2.5E-33 218.6 33.7 280 17-303 60-389 (433)
127 1nir_A Nitrite reductase; hemo 100.0 3.4E-28 1.2E-32 220.1 33.7 281 20-304 181-514 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.4E-28 2.2E-32 211.8 26.6 274 18-301 63-384 (415)
129 1nir_A Nitrite reductase; hemo 100.0 8.8E-27 3E-31 210.9 33.1 277 24-307 144-461 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.1E-26 3.7E-31 204.0 28.9 263 13-286 113-410 (415)
131 2ecf_A Dipeptidyl peptidase IV 100.0 1.2E-26 4.2E-31 217.9 29.9 279 17-303 36-412 (741)
132 3vgz_A Uncharacterized protein 100.0 1.1E-24 3.7E-29 186.5 36.2 270 17-294 40-334 (353)
133 2ojh_A Uncharacterized protein 100.0 2.8E-26 9.5E-31 191.0 25.3 256 35-295 18-293 (297)
134 3u4y_A Uncharacterized protein 99.9 9.8E-25 3.4E-29 185.4 32.1 275 23-303 3-303 (331)
135 1xfd_A DIP, dipeptidyl aminope 99.9 1.8E-25 6.1E-30 209.5 26.1 280 18-303 17-392 (723)
136 1ri6_A Putative isomerase YBHE 99.9 8.2E-24 2.8E-28 180.1 31.9 270 28-303 3-307 (343)
137 1ri6_A Putative isomerase YBHE 99.9 7.1E-24 2.4E-28 180.5 29.9 267 15-287 35-336 (343)
138 1k32_A Tricorn protease; prote 99.9 1.9E-24 6.6E-29 210.2 29.3 275 13-300 199-498 (1045)
139 2ecf_A Dipeptidyl peptidase IV 99.9 2.1E-24 7E-29 202.8 28.0 267 19-294 110-445 (741)
140 2z3z_A Dipeptidyl aminopeptida 99.9 1.1E-23 3.7E-28 196.9 31.9 277 18-303 82-434 (706)
141 3o4h_A Acylamino-acid-releasin 99.9 6.7E-24 2.3E-28 194.1 27.1 270 17-303 21-312 (582)
142 1k32_A Tricorn protease; prote 99.9 1.2E-23 4.1E-28 204.6 30.2 284 11-303 46-460 (1045)
143 2ojh_A Uncharacterized protein 99.9 2.2E-24 7.5E-29 179.5 21.4 236 12-253 36-293 (297)
144 1pby_B Quinohemoprotein amine 99.9 4.1E-23 1.4E-27 175.4 29.1 262 30-304 2-310 (337)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-23 8.6E-28 183.4 23.0 214 39-263 23-279 (434)
146 3u4y_A Uncharacterized protein 99.9 8.3E-22 2.9E-26 167.3 31.3 244 16-264 39-306 (331)
147 3hfq_A Uncharacterized protein 99.9 1.6E-21 5.5E-26 166.8 31.6 249 15-266 37-323 (347)
148 3hfq_A Uncharacterized protein 99.9 5.9E-21 2E-25 163.3 33.9 263 37-303 14-316 (347)
149 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-22 4.7E-27 189.9 24.9 269 19-293 62-429 (723)
150 2z3z_A Dipeptidyl aminopeptida 99.9 2.4E-22 8.1E-27 187.9 25.4 265 19-295 27-377 (706)
151 1z68_A Fibroblast activation p 99.9 9.2E-23 3.1E-27 191.1 21.2 273 21-303 19-390 (719)
152 1pby_B Quinohemoprotein amine 99.9 1.6E-21 5.3E-26 165.6 26.8 242 19-272 35-320 (337)
153 3scy_A Hypothetical bacterial 99.9 2.9E-20 9.9E-25 159.9 34.1 271 28-303 12-336 (361)
154 3scy_A Hypothetical bacterial 99.9 3.1E-20 1.1E-24 159.7 33.0 261 16-282 48-360 (361)
155 1jmx_B Amine dehydrogenase; ox 99.9 9.1E-21 3.1E-25 161.7 28.8 273 22-304 4-325 (349)
156 3o4h_A Acylamino-acid-releasin 99.9 5.2E-22 1.8E-26 181.6 21.5 233 59-302 21-274 (582)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 4.3E-21 1.5E-25 169.1 25.5 237 17-259 36-330 (434)
158 3vgz_A Uncharacterized protein 99.9 3.9E-20 1.3E-24 158.1 30.0 231 17-253 88-335 (353)
159 3pe7_A Oligogalacturonate lyas 99.9 2.4E-21 8.2E-26 168.1 22.3 285 12-302 25-380 (388)
160 2oiz_A Aromatic amine dehydrog 99.9 3E-19 1E-23 153.7 30.7 252 27-286 13-360 (361)
161 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.2E-18 4.2E-23 150.1 29.2 269 31-303 4-340 (365)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.3E-19 1.8E-23 152.4 25.5 243 18-263 40-342 (365)
163 4a5s_A Dipeptidyl peptidase 4 99.8 2.1E-19 7.3E-24 168.8 24.7 269 17-294 16-383 (740)
164 3azo_A Aminopeptidase; POP fam 99.8 8.5E-19 2.9E-23 162.6 28.4 286 11-302 17-365 (662)
165 1z68_A Fibroblast activation p 99.8 7.1E-20 2.4E-24 171.5 20.6 266 19-291 61-427 (719)
166 3fvz_A Peptidyl-glycine alpha- 99.8 5.8E-18 2E-22 143.9 30.1 241 60-304 24-322 (329)
167 3c5m_A Oligogalacturonate lyas 99.8 1.4E-19 4.7E-24 157.1 19.8 274 20-302 38-380 (396)
168 3fvz_A Peptidyl-glycine alpha- 99.8 8.5E-18 2.9E-22 142.8 27.8 241 17-262 23-322 (329)
169 1jmx_B Amine dehydrogenase; ox 99.8 4E-18 1.4E-22 145.2 25.9 233 19-270 44-333 (349)
170 1q7f_A NHL, brain tumor CG1071 99.8 7E-17 2.4E-21 134.2 32.7 237 16-262 28-280 (286)
171 2dg1_A DRP35, lactonase; beta 99.8 2.7E-17 9.1E-22 139.7 26.9 268 17-294 5-300 (333)
172 2gop_A Trilobed protease; beta 99.8 3.8E-17 1.3E-21 139.5 28.0 257 18-302 15-329 (347)
173 2z2n_A Virginiamycin B lyase; 99.8 4.2E-15 1.5E-19 123.7 37.7 277 15-301 12-293 (299)
174 3azo_A Aminopeptidase; POP fam 99.8 2.2E-17 7.4E-22 153.2 24.2 238 22-266 81-373 (662)
175 1q7f_A NHL, brain tumor CG1071 99.8 9.7E-16 3.3E-20 127.2 31.0 234 61-304 31-280 (286)
176 2xdw_A Prolyl endopeptidase; a 99.8 1.7E-16 5.9E-21 148.4 28.7 242 18-264 125-416 (710)
177 1qks_A Cytochrome CD1 nitrite 99.8 4E-15 1.4E-19 134.7 34.6 280 18-299 197-533 (567)
178 3pe7_A Oligogalacturonate lyas 99.8 1.3E-16 4.6E-21 138.1 23.9 254 44-303 15-328 (388)
179 4a5s_A Dipeptidyl peptidase 4 99.8 3.7E-17 1.3E-21 153.6 20.9 233 61-301 18-348 (740)
180 2bkl_A Prolyl endopeptidase; m 99.8 7.8E-17 2.7E-21 150.4 20.5 242 17-265 120-400 (695)
181 2gop_A Trilobed protease; beta 99.7 1.8E-15 6.1E-20 129.0 27.2 223 18-261 59-330 (347)
182 3e5z_A Putative gluconolactona 99.7 2.6E-15 8.9E-20 125.4 27.3 236 54-301 22-284 (296)
183 3e5z_A Putative gluconolactona 99.7 4.2E-15 1.4E-19 124.1 27.5 240 15-267 25-291 (296)
184 2xdw_A Prolyl endopeptidase; a 99.7 6.2E-15 2.1E-19 137.9 31.2 271 27-302 81-412 (710)
185 2qc5_A Streptogramin B lactona 99.7 1.3E-13 4.4E-18 114.7 35.8 267 16-292 18-290 (300)
186 1rwi_B Serine/threonine-protei 99.7 3.3E-15 1.1E-19 122.8 25.6 240 19-264 25-266 (270)
187 1rwi_B Serine/threonine-protei 99.7 1.2E-14 4E-19 119.5 27.1 237 61-303 25-263 (270)
188 3dsm_A Uncharacterized protein 99.7 2.9E-14 9.9E-19 120.9 29.6 257 37-303 15-301 (328)
189 2bkl_A Prolyl endopeptidase; m 99.7 2E-15 7E-20 140.8 24.6 269 26-302 76-395 (695)
190 2dg1_A DRP35, lactonase; beta 99.7 7.5E-14 2.6E-18 118.3 32.0 232 15-252 42-300 (333)
191 3c5m_A Oligogalacturonate lyas 99.7 1.1E-15 3.8E-20 132.4 20.0 242 43-292 14-301 (396)
192 2oiz_A Aromatic amine dehydrog 99.7 1.8E-14 6.3E-19 123.8 27.1 216 22-244 54-360 (361)
193 1qks_A Cytochrome CD1 nitrite 99.7 1.4E-13 4.8E-18 124.6 33.4 260 27-292 165-458 (567)
194 3no2_A Uncharacterized protein 99.7 6E-14 2.1E-18 115.9 28.5 213 70-292 4-231 (276)
195 2mad_H Methylamine dehydrogena 99.7 4.5E-13 1.6E-17 115.4 34.2 267 24-302 27-348 (373)
196 3no2_A Uncharacterized protein 99.7 1.2E-13 4E-18 114.2 27.5 234 28-271 4-261 (276)
197 3sjl_D Methylamine dehydrogena 99.7 5E-14 1.7E-18 120.4 25.5 270 22-301 37-360 (386)
198 1yr2_A Prolyl oligopeptidase; 99.7 2.2E-14 7.4E-19 134.8 24.7 239 19-264 164-443 (741)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.5E-13 5.3E-18 115.2 26.9 240 15-262 15-299 (314)
200 1yr2_A Prolyl oligopeptidase; 99.7 9.7E-14 3.3E-18 130.4 27.5 269 26-301 115-438 (741)
201 3dsm_A Uncharacterized protein 99.6 1E-12 3.4E-17 111.4 28.8 252 18-282 44-320 (328)
202 2z2n_A Virginiamycin B lyase; 99.6 7.7E-12 2.6E-16 103.8 32.2 237 17-264 56-297 (299)
203 3hrp_A Uncharacterized protein 99.6 1.6E-12 5.5E-17 113.5 29.1 236 18-260 131-408 (409)
204 3sjl_D Methylamine dehydrogena 99.6 1E-12 3.6E-17 112.3 27.1 255 22-284 82-384 (386)
205 2mad_H Methylamine dehydrogena 99.6 9.6E-12 3.3E-16 107.1 33.2 238 22-269 70-357 (373)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-11 4.3E-16 103.5 31.3 235 61-303 19-298 (314)
207 3c75_H MADH, methylamine dehyd 99.6 1.1E-12 3.6E-17 114.1 24.3 266 27-302 82-400 (426)
208 1xip_A Nucleoporin NUP159; bet 99.6 1.3E-13 4.4E-18 118.3 17.2 171 103-290 39-230 (388)
209 3iuj_A Prolyl endopeptidase; h 99.6 1.2E-12 4.2E-17 121.9 24.0 243 16-265 127-408 (693)
210 3hrp_A Uncharacterized protein 99.5 2.5E-11 8.5E-16 105.9 30.6 231 61-299 132-405 (409)
211 2qc5_A Streptogramin B lactona 99.5 1.8E-10 6E-15 95.6 32.7 233 60-300 20-256 (300)
212 3g4e_A Regucalcin; six bladed 99.5 4.1E-11 1.4E-15 99.9 28.6 225 19-250 14-260 (297)
213 3g4e_A Regucalcin; six bladed 99.5 2.2E-10 7.5E-15 95.5 32.9 225 62-293 15-261 (297)
214 1xip_A Nucleoporin NUP159; bet 99.5 2.1E-12 7.2E-17 110.8 19.4 173 61-250 39-232 (388)
215 2ghs_A AGR_C_1268P; regucalcin 99.5 3.4E-10 1.2E-14 95.7 30.5 222 19-251 50-291 (326)
216 3c75_H MADH, methylamine dehyd 99.5 5.1E-11 1.7E-15 103.6 25.1 239 22-269 122-409 (426)
217 1mda_H Methylamine dehydrogena 99.4 3.1E-11 1.1E-15 103.2 21.7 244 28-283 30-366 (368)
218 3dr2_A Exported gluconolactona 99.4 3.4E-10 1.2E-14 94.7 26.7 233 58-301 43-304 (305)
219 2qe8_A Uncharacterized protein 99.4 1.3E-11 4.5E-16 105.1 17.8 259 18-295 17-312 (343)
220 2ghs_A AGR_C_1268P; regucalcin 99.4 3E-09 1E-13 89.8 31.6 220 63-293 52-291 (326)
221 3iuj_A Prolyl endopeptidase; h 99.4 1.6E-10 5.6E-15 107.6 24.8 233 61-300 130-401 (693)
222 2hz6_A Endoplasmic reticulum t 99.4 3.6E-13 1.2E-17 116.0 5.7 188 70-270 8-200 (369)
223 3dr2_A Exported gluconolactona 99.3 2.6E-09 8.7E-14 89.3 25.7 225 18-256 45-301 (305)
224 3q7m_A Lipoprotein YFGL, BAMB; 99.3 8.3E-09 2.8E-13 88.8 29.6 258 28-301 52-334 (376)
225 2hz6_A Endoplasmic reticulum t 99.3 3.1E-12 1E-16 110.2 7.7 221 28-264 8-238 (369)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1E-08 3.6E-13 88.1 29.7 259 28-300 102-374 (376)
227 1kb0_A Quinohemoprotein alcoho 99.3 1.1E-09 3.8E-14 101.5 23.8 267 29-303 77-506 (677)
228 1kb0_A Quinohemoprotein alcoho 99.3 3.6E-09 1.2E-13 98.1 26.1 257 28-291 127-537 (677)
229 1yiq_A Quinohemoprotein alcoho 99.3 3.2E-09 1.1E-13 98.7 25.6 266 29-302 70-503 (689)
230 1npe_A Nidogen, entactin; glyc 99.3 1.3E-07 4.5E-12 77.2 32.6 252 29-286 1-263 (267)
231 1yiq_A Quinohemoprotein alcoho 99.3 6.8E-09 2.3E-13 96.4 27.6 257 29-290 121-534 (689)
232 3hxj_A Pyrrolo-quinoline quino 99.2 9.1E-10 3.1E-14 92.8 19.2 265 18-304 60-324 (330)
233 2qe8_A Uncharacterized protein 99.2 4.1E-09 1.4E-13 89.7 20.8 226 16-259 65-318 (343)
234 2ece_A 462AA long hypothetical 99.1 1.5E-07 5.1E-12 81.4 25.8 221 69-292 93-399 (462)
235 3hxj_A Pyrrolo-quinoline quino 99.1 3.1E-09 1.1E-13 89.4 14.4 256 22-299 24-279 (330)
236 2ece_A 462AA long hypothetical 99.1 1.5E-07 5E-12 81.4 24.6 222 27-250 93-399 (462)
237 1npe_A Nidogen, entactin; glyc 99.0 1.7E-06 5.8E-11 70.5 29.7 221 18-243 36-262 (267)
238 2iwa_A Glutamine cyclotransfer 99.0 5.7E-07 1.9E-11 72.9 25.3 190 103-301 22-234 (266)
239 1mda_H Methylamine dehydrogena 99.0 6.7E-08 2.3E-12 82.6 18.8 213 82-303 47-345 (368)
240 1fwx_A Nitrous oxide reductase 99.0 1.6E-08 5.3E-13 90.4 15.1 241 27-293 99-407 (595)
241 3nol_A Glutamine cyclotransfer 99.0 8.9E-07 3E-11 71.1 23.8 190 93-293 33-244 (262)
242 1k3i_A Galactose oxidase precu 98.9 6E-07 2.1E-11 83.1 26.0 268 22-293 190-530 (656)
243 3v64_C Agrin; beta propeller, 98.9 1.1E-05 3.7E-10 68.6 31.9 259 16-281 32-294 (349)
244 1kv9_A Type II quinohemoprotei 98.9 3.6E-07 1.2E-11 84.6 23.4 266 29-303 66-487 (668)
245 4a2l_A BT_4663, two-component 98.9 4.3E-05 1.5E-09 72.3 37.6 268 20-299 175-476 (795)
246 3v65_B Low-density lipoprotein 98.9 8E-06 2.7E-10 70.5 29.6 257 20-282 79-338 (386)
247 1kv9_A Type II quinohemoprotei 98.9 8.6E-07 2.9E-11 82.1 24.7 256 29-289 117-516 (668)
248 4a2l_A BT_4663, two-component 98.9 4.6E-05 1.6E-09 72.1 36.8 270 17-299 214-522 (795)
249 2fp8_A Strictosidine synthase; 98.9 4.5E-06 1.5E-10 70.0 26.4 235 19-262 20-313 (322)
250 3nok_A Glutaminyl cyclase; bet 98.8 2.7E-06 9.2E-11 68.3 22.6 181 103-293 56-254 (268)
251 3mbr_X Glutamine cyclotransfer 98.8 7.5E-06 2.6E-10 65.1 24.7 198 93-301 11-233 (243)
252 2p4o_A Hypothetical protein; p 98.8 9.4E-06 3.2E-10 67.6 25.8 228 18-253 32-279 (306)
253 2iwa_A Glutamine cyclotransfer 98.8 9.2E-06 3.2E-10 65.8 24.6 193 19-220 22-237 (266)
254 2ad6_A Methanol dehydrogenase 98.8 7.2E-06 2.4E-10 74.5 26.5 256 29-291 115-524 (571)
255 2ad6_A Methanol dehydrogenase 98.8 6.9E-06 2.3E-10 74.6 25.7 266 29-301 62-491 (571)
256 2p4o_A Hypothetical protein; p 98.8 5.3E-05 1.8E-09 63.0 29.8 224 61-294 33-278 (306)
257 3nol_A Glutamine cyclotransfer 98.7 2E-05 7E-10 63.2 23.9 179 62-251 45-244 (262)
258 1w6s_A Methanol dehydrogenase 98.7 1.2E-05 4.2E-10 73.1 25.4 252 32-289 124-531 (599)
259 1w6s_A Methanol dehydrogenase 98.7 2.1E-05 7.2E-10 71.6 26.8 195 29-228 62-350 (599)
260 3nok_A Glutaminyl cyclase; bet 98.7 3.8E-05 1.3E-09 61.7 24.7 176 63-250 58-253 (268)
261 1flg_A Protein (quinoprotein e 98.7 5.6E-05 1.9E-09 68.7 29.0 80 210-290 465-545 (582)
262 3tc9_A Hypothetical hydrolase; 98.6 0.00012 4E-09 64.1 28.5 240 19-261 138-429 (430)
263 3v9f_A Two-component system se 98.6 0.00038 1.3E-08 65.7 34.1 269 17-299 312-607 (781)
264 3v9f_A Two-component system se 98.6 0.00024 8.1E-09 67.1 32.4 268 18-298 211-519 (781)
265 1flg_A Protein (quinoprotein e 98.6 0.00012 4.1E-09 66.5 28.6 196 29-228 68-363 (582)
266 1ijq_A LDL receptor, low-densi 98.6 0.00018 6.2E-09 60.1 31.5 245 31-281 3-257 (316)
267 1fwx_A Nitrous oxide reductase 98.6 1E-05 3.5E-10 72.4 20.0 208 70-303 100-360 (595)
268 3p5b_L Low density lipoprotein 98.6 0.00028 9.6E-09 61.0 28.9 219 17-239 111-339 (400)
269 2fp8_A Strictosidine synthase; 98.5 0.00017 5.8E-09 60.3 26.4 231 63-302 22-311 (322)
270 3v65_B Low-density lipoprotein 98.5 0.00034 1.2E-08 60.2 27.9 223 71-299 87-313 (386)
271 2xe4_A Oligopeptidase B; hydro 98.5 6.7E-05 2.3E-09 70.5 25.0 241 19-264 175-460 (751)
272 3v64_C Agrin; beta propeller, 98.5 0.00039 1.3E-08 59.0 30.1 220 73-298 46-269 (349)
273 1ijq_A LDL receptor, low-densi 98.5 0.00035 1.2E-08 58.3 29.0 207 17-227 29-245 (316)
274 3p5b_L Low density lipoprotein 98.5 0.00047 1.6E-08 59.6 33.4 248 30-282 84-340 (400)
275 3sov_A LRP-6, low-density lipo 98.5 0.00041 1.4E-08 58.0 29.5 247 30-281 5-257 (318)
276 3sov_A LRP-6, low-density lipo 98.4 0.00049 1.7E-08 57.5 26.7 218 80-300 12-234 (318)
277 2xzh_A Clathrin heavy chain 1; 98.4 0.00045 1.5E-08 57.0 28.9 234 26-265 75-335 (365)
278 3mbr_X Glutamine cyclotransfer 98.4 0.00034 1.2E-08 55.6 28.1 180 62-251 23-223 (243)
279 4hw6_A Hypothetical protein, I 98.4 0.00077 2.6E-08 58.9 28.0 238 19-261 140-432 (433)
280 3qqz_A Putative uncharacterize 98.4 0.00049 1.7E-08 55.3 25.5 202 11-217 20-250 (255)
281 3tc9_A Hypothetical hydrolase; 98.4 0.00048 1.7E-08 60.1 26.0 233 63-300 140-426 (430)
282 2xbg_A YCF48-like protein; pho 98.4 0.00071 2.4E-08 56.7 32.7 266 17-298 35-316 (327)
283 4hw6_A Hypothetical protein, I 98.3 0.00065 2.2E-08 59.4 25.4 233 63-300 142-429 (433)
284 3m0c_C LDL receptor, low-densi 98.3 0.0027 9.3E-08 59.6 31.1 246 31-281 397-651 (791)
285 3m0c_C LDL receptor, low-densi 98.3 0.0012 4.1E-08 62.0 27.7 207 17-227 423-639 (791)
286 1k3i_A Galactose oxidase precu 98.2 4E-05 1.4E-09 70.8 16.9 227 22-251 247-530 (656)
287 1bpo_A Protein (clathrin); cla 98.2 0.002 6.8E-08 55.3 30.2 235 25-265 73-334 (494)
288 2xe4_A Oligopeptidase B; hydro 98.2 0.00039 1.3E-08 65.3 22.4 196 103-303 175-397 (751)
289 1n7d_A LDL receptor, low-densi 98.2 2.4E-05 8.2E-10 72.7 13.9 243 38-285 385-637 (699)
290 3amr_A 3-phytase; beta-propell 98.1 0.0018 6.1E-08 54.3 22.5 194 71-270 40-272 (355)
291 3s94_A LRP-6, low-density lipo 98.1 0.004 1.4E-07 57.0 27.0 240 37-280 16-261 (619)
292 1n7d_A LDL receptor, low-densi 98.1 2.4E-05 8.3E-10 72.7 11.9 219 18-240 406-634 (699)
293 3kya_A Putative phosphatase; s 98.0 0.0072 2.5E-07 53.3 27.1 241 19-262 140-475 (496)
294 2vpj_A Kelch-like protein 12; 98.0 0.0048 1.6E-07 50.8 22.7 225 28-263 14-279 (301)
295 2ism_A Putative oxidoreductase 97.9 0.007 2.4E-07 51.2 25.3 225 17-250 30-333 (352)
296 4a0p_A LRP6, LRP-6, low-densit 97.9 0.013 4.3E-07 53.8 27.4 199 18-222 37-239 (628)
297 2xzh_A Clathrin heavy chain 1; 97.9 0.0084 2.9E-07 49.5 31.3 253 38-298 48-326 (365)
298 2xn4_A Kelch-like protein 2; s 97.8 0.0085 2.9E-07 49.3 22.2 224 29-263 16-277 (302)
299 3amr_A 3-phytase; beta-propell 97.8 0.0097 3.3E-07 49.9 24.7 201 22-227 30-271 (355)
300 4a0p_A LRP6, LRP-6, low-densit 97.8 0.018 6.1E-07 52.8 32.6 236 30-272 7-247 (628)
301 2xbg_A YCF48-like protein; pho 97.8 0.011 3.9E-07 49.3 28.3 230 17-260 79-320 (327)
302 2p9w_A MAL S 1 allergenic prot 97.8 0.011 3.7E-07 49.1 25.3 198 101-299 12-260 (334)
303 3qqz_A Putative uncharacterize 97.7 0.013 4.4E-07 47.0 25.1 198 96-300 21-249 (255)
304 3s94_A LRP-6, low-density lipo 97.7 0.032 1.1E-06 51.0 35.4 154 146-300 350-506 (619)
305 3ii7_A Kelch-like protein 7; p 97.7 0.016 5.6E-07 47.6 23.3 222 31-263 14-273 (306)
306 1bpo_A Protein (clathrin); cla 97.6 0.024 8.2E-07 48.8 33.3 253 38-298 47-325 (494)
307 3a9g_A Putative uncharacterize 97.6 0.024 8.2E-07 48.0 24.4 231 17-250 28-330 (354)
308 3kya_A Putative phosphatase; s 97.6 0.032 1.1E-06 49.2 27.3 237 63-304 142-475 (496)
309 1zgk_A Kelch-like ECH-associat 97.6 0.023 8E-07 46.8 21.2 227 26-263 22-288 (308)
310 2vpj_A Kelch-like protein 12; 97.5 0.025 8.6E-07 46.3 21.1 202 81-295 31-264 (301)
311 1xi4_A Clathrin heavy chain; a 97.4 0.014 4.9E-07 57.5 18.5 231 26-262 74-331 (1630)
312 1xi4_A Clathrin heavy chain; a 97.3 0.053 1.8E-06 53.6 22.0 254 37-298 46-325 (1630)
313 2ism_A Putative oxidoreductase 97.3 0.069 2.4E-06 45.0 25.1 225 62-293 33-334 (352)
314 2xn4_A Kelch-like protein 2; s 97.2 0.071 2.4E-06 43.6 20.8 201 81-295 30-262 (302)
315 1zgk_A Kelch-like ECH-associat 97.1 0.087 3E-06 43.3 19.2 213 70-295 24-273 (308)
316 2p9w_A MAL S 1 allergenic prot 96.9 0.13 4.5E-06 42.7 22.6 198 21-221 16-266 (334)
317 3ii7_A Kelch-like protein 7; p 96.9 0.13 4.4E-06 42.1 21.2 209 73-294 14-257 (306)
318 4asc_A Kelch repeat and BTB do 96.8 0.15 5.2E-06 41.9 22.2 218 32-263 8-278 (315)
319 2g8s_A Glucose/sorbosone dehyd 96.6 0.25 8.7E-06 41.6 24.8 231 17-249 17-340 (353)
320 3sre_A PON1, serum paraoxonase 96.6 0.28 9.4E-06 41.4 21.0 183 104-292 52-285 (355)
321 2uvk_A YJHT; unknown function, 96.5 0.3 1E-05 40.9 19.2 94 28-122 19-128 (357)
322 1tl2_A L10, protein (tachylect 96.5 0.21 7.3E-06 38.8 16.9 150 146-307 42-213 (236)
323 3sre_A PON1, serum paraoxonase 96.3 0.42 1.4E-05 40.3 22.1 152 21-176 53-252 (355)
324 2zwa_A Leucine carboxyl methyl 96.3 0.73 2.5E-05 42.7 20.3 196 27-224 396-639 (695)
325 2woz_A Kelch repeat and BTB do 96.1 0.47 1.6E-05 39.0 21.8 218 32-263 19-288 (318)
326 4asc_A Kelch repeat and BTB do 96.0 0.51 1.8E-05 38.7 21.6 208 74-294 8-253 (315)
327 3a9g_A Putative uncharacterize 96.0 0.6 2E-05 39.3 28.6 226 61-292 30-330 (354)
328 3ei3_A DNA damage-binding prot 95.7 1.7 6E-05 42.7 36.7 73 17-89 553-635 (1158)
329 2be1_A Serine/threonine-protei 95.7 0.66 2.3E-05 38.7 15.7 191 30-225 11-236 (339)
330 3pbp_A Nucleoporin NUP82; beta 95.7 0.94 3.2E-05 39.0 18.4 143 70-216 31-208 (452)
331 3das_A Putative oxidoreductase 95.5 0.93 3.2E-05 38.0 27.8 233 13-250 27-326 (347)
332 2woz_A Kelch repeat and BTB do 95.3 0.99 3.4E-05 37.0 21.0 208 74-294 19-263 (318)
333 3pbp_A Nucleoporin NUP82; beta 95.2 1.4 4.7E-05 38.0 18.1 143 27-172 30-208 (452)
334 2uvk_A YJHT; unknown function, 94.8 1.5 5.2E-05 36.5 17.3 124 167-295 168-327 (357)
335 1tl2_A L10, protein (tachylect 94.4 0.34 1.1E-05 37.7 9.3 96 196-298 47-157 (236)
336 2be1_A Serine/threonine-protei 94.2 0.13 4.3E-06 43.1 7.2 115 158-272 11-140 (339)
337 3ott_A Two-component system se 94.1 3.7 0.00013 38.3 32.8 261 17-295 21-299 (758)
338 3qhy_B Beta-lactamase inhibito 93.8 2.2 7.5E-05 34.5 22.4 224 18-263 24-247 (282)
339 1cru_A Protein (soluble quinop 93.6 3.4 0.00012 36.0 27.8 105 17-121 26-163 (454)
340 2zwa_A Leucine carboxyl methyl 93.4 4.8 0.00016 37.2 21.9 191 69-264 396-637 (695)
341 3s25_A Hypothetical 7-bladed b 93.0 3.2 0.00011 34.0 27.3 242 27-298 23-287 (302)
342 2g8s_A Glucose/sorbosone dehyd 92.9 3.7 0.00013 34.4 25.5 65 233-297 272-347 (353)
343 3b7f_A Glycosyl hydrolase, BNR 91.2 6.3 0.00021 33.3 23.8 47 235-282 344-391 (394)
344 3qhy_B Beta-lactamase inhibito 90.6 5.8 0.0002 32.0 21.4 206 80-304 41-246 (282)
345 3ei3_A DNA damage-binding prot 90.1 15 0.00053 36.2 35.5 138 82-223 493-641 (1158)
346 3das_A Putative oxidoreductase 88.6 9.7 0.00033 31.8 30.4 225 61-292 33-326 (347)
347 3ott_A Two-component system se 88.6 15 0.00053 34.0 34.0 266 17-299 62-348 (758)
348 3sbq_A Nitrous-oxide reductase 87.9 2.5 8.6E-05 37.8 8.7 107 13-120 318-453 (638)
349 3s25_A Hypothetical 7-bladed b 85.3 14 0.00047 30.1 21.9 200 67-293 21-242 (302)
350 1cru_A Protein (soluble quinop 85.0 19 0.00063 31.3 18.8 62 103-164 28-99 (454)
351 3sbq_A Nitrous-oxide reductase 79.7 35 0.0012 30.7 20.0 264 32-302 73-406 (638)
352 3b7f_A Glycosyl hydrolase, BNR 76.9 32 0.0011 28.8 26.7 141 30-172 23-204 (394)
353 2wg3_C Hedgehog-interacting pr 67.2 63 0.0022 28.1 25.7 106 17-122 13-159 (463)
354 4gq2_M Nucleoporin NUP120; bet 67.0 8.3 0.00028 37.2 5.9 36 233-268 237-272 (950)
355 4gq2_M Nucleoporin NUP120; bet 66.7 9.9 0.00034 36.6 6.4 39 18-56 236-274 (950)
356 4hvt_A Ritya.17583.B, post-pro 61.7 1E+02 0.0035 28.5 22.1 236 19-261 130-429 (711)
357 4fhn_B Nucleoporin NUP120; pro 53.3 11 0.00037 37.1 4.1 39 19-57 239-277 (1139)
358 4fhn_B Nucleoporin NUP120; pro 52.4 11 0.00036 37.2 3.9 36 233-268 239-274 (1139)
359 4a9v_A PHOX; hydrolase, beta-p 51.4 76 0.0026 28.5 8.7 59 233-291 477-548 (592)
360 4a9v_A PHOX; hydrolase, beta-p 49.7 74 0.0025 28.6 8.4 39 212-250 510-549 (592)
361 3f7f_A Nucleoporin NUP120; nuc 48.7 34 0.0012 31.6 6.2 37 19-57 223-259 (729)
362 1suu_A DNA gyrase subunit A; t 48.0 1.1E+02 0.0038 24.8 27.9 231 68-303 5-283 (312)
363 3f7f_A Nucleoporin NUP120; nuc 46.6 27 0.00093 32.3 5.3 34 233-268 223-256 (729)
364 1q47_A Semaphorin 3A; beta pro 44.5 1.2E+02 0.0039 26.7 8.8 67 19-85 405-487 (495)
365 3q6k_A 43.2 kDa salivary prote 43.6 1.5E+02 0.005 25.0 18.6 135 168-303 124-305 (381)
366 3zwu_A Alkaline phosphatase PH 43.3 1.1E+02 0.0036 27.7 8.5 38 212-249 510-548 (592)
367 3zwu_A Alkaline phosphatase PH 42.0 98 0.0033 27.9 8.1 59 233-291 477-548 (592)
368 3kci_A Probable E3 ubiquitin-p 41.5 1.5E+02 0.0053 24.6 31.6 226 71-305 62-346 (389)
369 3a0f_A Xyloglucanase; beta-pro 38.6 2.5E+02 0.0084 26.1 15.0 152 13-167 16-203 (763)
370 1sqj_A OXG-RCBH, oligoxylogluc 33.8 3E+02 0.01 25.7 26.2 147 17-166 14-190 (789)
371 3uc1_A DNA gyrase subunit A; D 32.9 2E+02 0.0069 23.5 23.7 227 71-301 3-277 (327)
372 3al9_A Plexin-A2; beta-propell 30.8 1.1E+02 0.0036 27.3 6.5 68 18-85 400-476 (539)
373 3nvq_A Semaphorin-7A; beta-pro 29.5 2.2E+02 0.0076 25.6 8.2 68 18-85 362-444 (590)
374 3al9_A Plexin-A2; beta-propell 28.1 1.9E+02 0.0065 25.7 7.6 59 199-257 411-476 (539)
375 1q47_A Semaphorin 3A; beta pro 24.3 3.6E+02 0.012 23.6 10.0 56 202-257 422-487 (495)
376 3oky_B Putative uncharacterize 23.8 3.9E+02 0.013 23.9 8.7 67 19-85 404-495 (565)
377 3nvq_A Semaphorin-7A; beta-pro 20.4 3.1E+02 0.011 24.7 7.4 57 72-128 381-445 (590)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.8e-56 Score=374.92 Aligned_cols=299 Identities=55% Similarity=1.027 Sum_probs=276.0
Q ss_pred chhhhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEE
Q 047355 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84 (312)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~ 84 (312)
|++.+.+.|.+|.+.|.+++|+|++++|++++.||+|++||+++.+....+..+..++.++.|++++++|++|+.|++|+
T Consensus 1 ~~l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CcceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 35677888999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred EEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe
Q 047355 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS 164 (312)
Q Consensus 85 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 164 (312)
+||+.+++.+..+++|.+.|.+++|+|+++++++|+.|++|++||++........+.+|...+..+.|+|.+...+++++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999998765666788999999999999997788999999
Q ss_pred CCCeEEEEEcCCCcceeeec-ccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCC
Q 047355 165 LDGTIQIWNMDSSAAKFTLD-AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243 (312)
Q Consensus 165 ~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~ 243 (312)
.|++|++||+++......+. .|...+..+.+.+.+++.++++|+.|+.|++||+++++++..+.+|...|++++|+|++
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCC
Confidence 99999999998877665554 55678888888777788999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCC--eEEEEecCCeEEEEecc
Q 047355 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN--QVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~g~i~v~~~~ 303 (312)
++|++|+.||+|++||..++++..++..+.+.+++++|+|++. +|++|+++|.+.+.+.+
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9999999999999999999999999999999999999999885 58999999988887765
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-52 Score=367.24 Aligned_cols=289 Identities=27% Similarity=0.473 Sum_probs=270.2
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
..+.+|.++|++++|+|++++|++|+.||+|++||+.+++....+..|...|.+++|++++++|++|+.|++|++||+.+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 34668899999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
.+.+..+.+|...|.+++|+|++.++++|+.|++|++||+... .+...+.+|...+..+.++| ++.++++++.|++|+
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-YCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVR 259 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEE
Confidence 9999999999999999999999999999999999999999866 56678899999999999998 568999999999999
Q ss_pred EEEcCCCcceeeecccccceeEEEEEEcC------------------CceEEEEEeCCCeEEEEeCCCCeEEEEeccccc
Q 047355 171 IWNMDSSAAKFTLDAHEKGINCIDYFITS------------------DKVYLITGSDDFTVKVWDYETKTCVQILEGHTN 232 (312)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~------------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 232 (312)
+||+++......+.+|...+.++.|.+.. ++.++++|+.|+.|++||+++++++..+.+|..
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 339 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC
Confidence 99999999888999999999999874321 167899999999999999999999999999999
Q ss_pred CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
.|++++|+|++++|++|+.|+.|++||+.+++...++..|...|++++|+|+++.|++|+.||+|+||-
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999984
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-50 Score=344.07 Aligned_cols=287 Identities=20% Similarity=0.348 Sum_probs=263.0
Q ss_pred hhhhcccCcEEEEEEcCC----CCeEEEEecCCeEEEEeccCCce--eeeEEecCCceeEEEEeeCCcEEEEecCCCeEE
Q 047355 11 KEFIQKSDRVKSVDFHPT----QPWVLASLYSGTVCIWNYHSQTT--EKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~----~~~l~~~~~dg~v~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~ 84 (312)
+++.+|.+.|++++|+|+ +.+|++|+.|++|++|++...+. ...+..|...|.++.|++++..+++|+.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 456689999999999975 56899999999999999876643 335678889999999999999999999999999
Q ss_pred EEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe
Q 047355 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS 164 (312)
Q Consensus 85 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 164 (312)
+||+.+++.+..+..|...+.+++|+|+++++++++.|+.+++||+... .....+..|...+..+.|+| ++.++++++
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-~~~~~~~~~~~~v~~~~~sp-dg~~lasg~ 183 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-KKEYSLDTRGKFILSIAYSP-DGKYLASGA 183 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-SEEEEEECSSSCEEEEEECT-TSSEEEEEE
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-ceeEEecCCCceEEEEEECC-CCCEEEEEc
Confidence 9999999999999999999999999999999999999999999999866 44556778888999999998 468999999
Q ss_pred CCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCc
Q 047355 165 LDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244 (312)
Q Consensus 165 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~ 244 (312)
.|+.|++||+++++....+.+|..++.+++| +|++.+|++|+.|+.|++||+++++....+.+|...|.+++|+|+++
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCCCEEEE--CTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCeEEEEECCCCcEEEEEcccCCceeEEEE--cCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence 9999999999999999999999999999875 78899999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 245 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
+|++++.|++|++||+.+++.+.++..|...|++++|+|+++.|++++.||+|+||-
T Consensus 262 ~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999999999999999999999999999999999999999999984
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.2e-50 Score=343.18 Aligned_cols=289 Identities=21% Similarity=0.386 Sum_probs=263.5
Q ss_pred hhhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEE
Q 047355 7 LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVF 86 (312)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 86 (312)
+...+.+.+|.+.|++++|+|++++|++|+.||+|++||+.+.+....+..+...+.+++|+|++++|++|+.|+.+++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34456788999999999999999999999999999999999888888888899999999999999999999999999999
Q ss_pred EccCc----eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEE
Q 047355 87 DYNTM----ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 87 d~~~~----~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 162 (312)
++.+. .....+.+|...|.++.|++++. +++++.|+.|++||+... .....+.+|...+..+.|+| ++.++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAP-DTRLFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC-cEEEEEcCCCCceEEEEECC-CCCEEEE
Confidence 99764 34567789999999999998765 889999999999999866 55677889999999999998 4589999
Q ss_pred EeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc--cccCeEEEEEe
Q 047355 163 ASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG--HTNNVTAVCFH 240 (312)
Q Consensus 163 ~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~i~~l~~~ 240 (312)
++.|++|++||+++......+.+|...+.++++ +|++.+|++|+.||.|++||+++++.+..+.. +...|++++|+
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~--~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICF--FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE--cCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence 999999999999999999999999999999875 68899999999999999999999887776652 33579999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 241 PELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 241 ~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
|++++|++|+.|+.|++||..+.+....+.+|...|.+++|+|+++.|++|+.||+|+||
T Consensus 280 ~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 999999999999999999999999999999999999999999999999999999999998
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-49 Score=342.03 Aligned_cols=290 Identities=23% Similarity=0.344 Sum_probs=263.4
Q ss_pred hhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEE
Q 047355 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 8 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd 87 (312)
...+++.+|.+.|++++|+|++++|++|+.||+|++||..+.+....+..+...+.+++|+|++..+++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34566889999999999999999999999999999999988888888888888999999999999999999999999999
Q ss_pred ccCc------eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCC-CCCEE
Q 047355 88 YNTM------ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK-DLNTF 160 (312)
Q Consensus 88 ~~~~------~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~ 160 (312)
+... .....+..|...|.+++|+|++..+++++.|++|++||++.. .....+.+|...+..+.++|. +++.|
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-QLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 8542 234567789999999999999999999999999999999865 566788999999999999875 35799
Q ss_pred EEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc--ccCeEEEE
Q 047355 161 ASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH--TNNVTAVC 238 (312)
Q Consensus 161 ~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~~~i~~l~ 238 (312)
++++.||+|++||+++++....+.+|...+.++++ +|++.++++|+.|++|++||+++.+.+..+..+ ...+.+++
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~--~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY--YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE--eCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 99999999999999999999999999999999885 678899999999999999999988877766543 34789999
Q ss_pred EeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 239 FHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 239 ~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
|+|++++|++|+.|+.|++||+.+++....+..|...|.+++|+|++++|++|+.||+|+||
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 99999999999999999999999999888999999999999999999999999999999998
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.9e-49 Score=332.82 Aligned_cols=297 Identities=20% Similarity=0.317 Sum_probs=259.3
Q ss_pred CCCcchhhhhhhhhcccCcEEEEEEcCCC-CeEEEEecCCeEEEEeccCC-----ceeeeEEecCCceeEEEEeeCCcEE
Q 047355 1 METPLELQIEKEFIQKSDRVKSVDFHPTQ-PWVLASLYSGTVCIWNYHSQ-----TTEKSVKVTDSPVRTAKFVAREHWI 74 (312)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l 74 (312)
|+.+..+.+..++.+|.+.|.+++|+|++ ++|++|+.|++|++|++... .....+..|...|..+.|++++++|
T Consensus 1 ~~~~~~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 80 (319)
T 3frx_A 1 MASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA 80 (319)
T ss_dssp ---CEEEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CCcceEEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEE
Confidence 45556677778899999999999999965 79999999999999998642 2356778899999999999999999
Q ss_pred EEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCC
Q 047355 75 VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154 (312)
Q Consensus 75 ~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 154 (312)
++|+.|++|++||+.+++....+.+|...|.+++++|++.++++|+.|++|++||++. .....+.+|...+..+.+.|
T Consensus 81 ~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~ 158 (319)
T 3frx_A 81 LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVP 158 (319)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECC
T ss_pred EEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999864 45667889999999999988
Q ss_pred CC-----CCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc
Q 047355 155 KD-----LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG 229 (312)
Q Consensus 155 ~~-----~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 229 (312)
.. ...+++++.|++|++||+++.+....+.+|...+.++++ +|++.+|++|+.||.|++||+++++++..+..
T Consensus 159 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~--sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 159 NEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTA--SPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp C------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEE--CTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 52 348999999999999999998888889999999999875 78999999999999999999999999888875
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecc--------cCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS--------SGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
...|.+++|+|++.+|++++.+ .+++|++........+. .+...+.+++|+|||++|++|+.||+|+||-
T Consensus 237 -~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 237 -QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp -CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 4679999999999999988855 59999998766554443 2345689999999999999999999999986
Q ss_pred cc
Q 047355 302 GN 303 (312)
Q Consensus 302 ~~ 303 (312)
..
T Consensus 315 ~~ 316 (319)
T 3frx_A 315 VM 316 (319)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.3e-50 Score=348.73 Aligned_cols=295 Identities=24% Similarity=0.401 Sum_probs=260.1
Q ss_pred hhhhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEE
Q 047355 6 ELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRV 85 (312)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~i 85 (312)
++...+.+.+|.+.|++++|+|++++|++|+.||+|++||+.+.+....+..|...|..++|+|++++|++|+.|+.+++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 34445668899999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EEccCce-------eeeeecccccceeEEEEecCC-CEEEEEeCCCcEEEEeCCCCceeeeEe-----cCCccceEEEEe
Q 047355 86 FDYNTMA-------SVKEFEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQTF-----EGHSHYVMQSAF 152 (312)
Q Consensus 86 wd~~~~~-------~~~~~~~h~~~i~~~~~~~~~-~~l~t~s~d~~v~iwd~~~~~~~~~~~-----~~~~~~v~~~~~ 152 (312)
|++.+.. ....+.+|.+.|.++.|.|++ ..+++|+.|++|++||+.... ....+ .+|...+..+.+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-RISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-EEEEECCCSSSSCCSCEEEEEE
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-EEEEeecccCCCCccCeEEEEe
Confidence 9986532 345678999999999999864 569999999999999998763 33334 578899999999
Q ss_pred CCCCCCEEEEEeCCCeEEEEEcC-CCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccc
Q 047355 153 NPKDLNTFASASLDGTIQIWNMD-SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT 231 (312)
Q Consensus 153 ~~~~~~~~~s~s~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~ 231 (312)
+|.+.+++++|+.|++|++||++ .......+.+|...|.+++| +|++.+|++|+.|++|++||+++++.+..+..+.
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 291 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKF--FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREP 291 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEE--CTTSSEEEEECSSSCEEEEETTTTEEEEEECCCC
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEE--ecCCCeEEEEcCCCeEEEEECCCCcEEEEecccc
Confidence 98788999999999999999998 45677788999999999885 6889999999999999999999999888876543
Q ss_pred c-------CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeec----ccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 232 N-------NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL----SSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 232 ~-------~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
. .|++++|+|++++|++|+.||.|++||..+.+....+ ..|...|.+++|+|+|+.|++|+.||+|+||
T Consensus 292 ~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred cccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 2 4899999999999999999999999999888776665 5688899999999999999999999999999
Q ss_pred ecc
Q 047355 301 IGN 303 (312)
Q Consensus 301 ~~~ 303 (312)
-..
T Consensus 372 ~~~ 374 (380)
T 3iz6_a 372 AFS 374 (380)
T ss_dssp ECC
T ss_pred ecC
Confidence 754
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.4e-49 Score=336.28 Aligned_cols=285 Identities=15% Similarity=0.221 Sum_probs=236.5
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccC-----------CceeeeEEecCCceeEEEEeeCCcEEEEecCCCeE
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-----------QTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i 83 (312)
.+...|.+++|+|||++|++++ |+++++||... .........++.+|.+++|++++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4567899999999999888766 77778876311 11112233456789999999985 68899999999
Q ss_pred EEEEccCceeeee----ecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCE
Q 047355 84 RVFDYNTMASVKE----FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159 (312)
Q Consensus 84 ~iwd~~~~~~~~~----~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 159 (312)
++||+++++.... ..+|.+.|++++|+|++++|++|+.|++|++||+.+. .....+.+|...|..+.|+|.+..+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~-~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ-VVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCcCCceEEEEecCCCCCc
Confidence 9999988765433 3589999999999999999999999999999999876 6678899999999999999987788
Q ss_pred EEEEeCCCeEEEEEcCCCcceeeecc--cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEE
Q 047355 160 FASASLDGTIQIWNMDSSAAKFTLDA--HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237 (312)
Q Consensus 160 ~~s~s~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l 237 (312)
|++++.|++|++||+++.+....+.. +...+.++++. ..++.++++|+.||.|++||+++++++..+.+|...|+++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH-PQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGL 263 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC-SSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeec-CCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 99999999999999999888776643 44456777653 2356789999999999999999999999999999999999
Q ss_pred EEeCCC-cEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCC-eEEEEecCCeEEEEeccC
Q 047355 238 CFHPEL-RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN-QVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 238 ~~~~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~v~~~~~ 304 (312)
+|+|++ ++|++|+.|++|+|||+.++++. .+.+|...|.+++|+|+++ +|++++.||+|++|.-..
T Consensus 264 ~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 999997 57999999999999999988765 4678999999999999986 567899999999997653
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-47 Score=328.03 Aligned_cols=295 Identities=19% Similarity=0.302 Sum_probs=250.9
Q ss_pred hhhhhhhhcccC-cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeee---EEecCCceeEEEEeeCCcEEEEecCCCe
Q 047355 7 LQIEKEFIQKSD-RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKS---VKVTDSPVRTAKFVAREHWIVCGSDDKF 82 (312)
Q Consensus 7 ~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~g~~dg~ 82 (312)
+.+..++.+|.+ .|++++|+|++++|++|+.|++|+|||+........ ...|...|.+++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 345667778887 999999999999999999999999999987653322 2457889999999999999999999999
Q ss_pred EEEEEccCc--eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc--eeeeEecCCccceEEEEeCCCCCC
Q 047355 83 IRVFDYNTM--ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW--ECTQTFEGHSHYVMQSAFNPKDLN 158 (312)
Q Consensus 83 i~iwd~~~~--~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~ 158 (312)
+++|++.+. +....+.+|..+|.+++|+|++++|++|+.|+.|++||+.... .....+.+|...+..+.|+|. +.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS-QE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS-SS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC-CC
Confidence 999998765 4567889999999999999999999999999999999987542 345677889999999999995 57
Q ss_pred EEEEEeCCCeEEEEEcCCCc--ceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCC---------------C
Q 047355 159 TFASASLDGTIQIWNMDSSA--AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET---------------K 221 (312)
Q Consensus 159 ~~~s~s~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~---------------~ 221 (312)
++++++.|++|++||.++.. ....+.+|...|.+++| +|++.+|++|+.|++|++||... .
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~--sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF--DPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE--CCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 99999999999999998764 34678899999999875 78899999999999999998632 1
Q ss_pred eEEEEecc-cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcc---------eeeecccCccceEEEEEecCC-CeEEE
Q 047355 222 TCVQILEG-HTNNVTAVCFHPELRIIITASEDGTILIWNATTFR---------LQNTLSSGLERVWSIGYKKGS-NQVAF 290 (312)
Q Consensus 222 ~~~~~~~~-h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~---------~~~~~~~~~~~v~~~~~~~~~-~~l~~ 290 (312)
+++..+.+ |...|++++|+|++..|++++.|+.|++|+..... ..+....|...|.+++|+|++ ..|++
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 34455555 88899999999999999999999999999976532 122345788899999999998 59999
Q ss_pred EecCCeEEEEeccC
Q 047355 291 GCDNGTLIVKIGNS 304 (312)
Q Consensus 291 ~~~~g~i~v~~~~~ 304 (312)
|+.||+|++|-...
T Consensus 322 ~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 322 CSDDGEVAFWKYQR 335 (345)
T ss_dssp EETTSCEEEEEECC
T ss_pred cCCCCcEEEEEecC
Confidence 99999999998764
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5e-47 Score=321.03 Aligned_cols=291 Identities=23% Similarity=0.431 Sum_probs=260.8
Q ss_pred hhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEc
Q 047355 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDY 88 (312)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 88 (312)
+...+.+|.+.|.+++|+|++++|++++.||.|++|++...+....+..|...|..++|++++++|++|+.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 44567889999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred cCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 89 NTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 89 ~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
++.+.+..+.+|...|.+++|+|+++++++|+.|+.|++||++.. .....+..|...+..+.|+| ++..+++++.|+.
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 172 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGL 172 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-EEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCCc
Confidence 999999999999999999999999999999999999999999765 55677888999999999998 4579999999999
Q ss_pred EEEEEcCCCcceeeec-ccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEE--EEEe-CCCc
Q 047355 169 IQIWNMDSSAAKFTLD-AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA--VCFH-PELR 244 (312)
Q Consensus 169 v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~--l~~~-~~~~ 244 (312)
|++||+++.+....+. .+...+.++. +++++.++++++.|+.|++||+++++++..+.+|...+.+ ..++ +++.
T Consensus 173 i~~wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 173 CRIWDTASGQCLKTLIDDDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp EEEEETTTCCEEEEECCSSCCCEEEEE--ECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred EEEEECCCCceeeEEeccCCCceEEEE--ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 9999999887766553 4455677766 4788999999999999999999999999999888765433 2344 6788
Q ss_pred EEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEe--cCCeEEEEecc
Q 047355 245 IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC--DNGTLIVKIGN 303 (312)
Q Consensus 245 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~g~i~v~~~~ 303 (312)
+|++|+.||.|++||+.+.++..++..|...|.+++|+|+++.|++++ .||+|++|-.+
T Consensus 251 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999999999999999999999999999987 69999999653
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.1e-48 Score=332.51 Aligned_cols=288 Identities=16% Similarity=0.231 Sum_probs=238.4
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEec------CCeEEEEeccCCce----eeeEEecCCceeEEEEeeCCcEEEEecCCCe
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLY------SGTVCIWNYHSQTT----EKSVKVTDSPVRTAKFVAREHWIVCGSDDKF 82 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~------dg~v~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~ 82 (312)
...|...|++++|+|||++|++|+. |+.|++|+..+... ......+...|.+++|++++. +++++.||+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence 3468899999999999999999987 78899998765433 233456778899999999875 566788999
Q ss_pred EEEEEccCceeee----eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCC
Q 047355 83 IRVFDYNTMASVK----EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158 (312)
Q Consensus 83 i~iwd~~~~~~~~----~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 158 (312)
|++||+.+++... ...+|...|++++|+|++++|++|+.|+.|++||+++. .....+.+|...+..+.|+|.+..
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~-~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK-AVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCc
Confidence 9999998765432 33579999999999999999999999999999998865 667788999999999999997777
Q ss_pred EEEEEeCCCeEEEEEcCCCcceeeec--ccccceeEEEEEEcCC-ceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeE
Q 047355 159 TFASASLDGTIQIWNMDSSAAKFTLD--AHEKGINCIDYFITSD-KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVT 235 (312)
Q Consensus 159 ~~~s~s~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~ 235 (312)
.+++++.|++|++||+++.+....+. .+...+.++++ +|+ +.++++|+.|+.|++||+++++++..+.+|...|+
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~--sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW--HPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE--CTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhh--hhcccceEEEeecccceeEEECCCCcEeEEEeccceeEE
Confidence 89999999999999999887665543 45566777775 454 56899999999999999999999999999999999
Q ss_pred EEEEeCCC-cEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEec-CCCeEEEEecCCeEEEEeccCC
Q 047355 236 AVCFHPEL-RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 236 ~l~~~~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
+++|+|++ ++||+|+.|++|+|||++++++...+ +|...|.+++|+| ++++|++++.||+|++|-..+.
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999987 57999999999999999998877655 6889999999998 8999999999999999976543
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-47 Score=324.48 Aligned_cols=292 Identities=21% Similarity=0.328 Sum_probs=237.5
Q ss_pred hhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCC--ceeeeE-Ee-cCCceeEEEEeeCCcEEEEecCCCeE
Q 047355 8 QIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ--TTEKSV-KV-TDSPVRTAKFVAREHWIVCGSDDKFI 83 (312)
Q Consensus 8 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~g~~dg~i 83 (312)
++.+.+.+|.++|++++|+|+ +|++|+.|++|++||+... +....+ .. |..+|.+++|+|++++|++|+.|++|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 445678899999999999988 9999999999999999764 333344 23 77899999999999999999999999
Q ss_pred EEEEccC-------ceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCC---ceeeeEecCCccceEEEEeC
Q 047355 84 RVFDYNT-------MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN---WECTQTFEGHSHYVMQSAFN 153 (312)
Q Consensus 84 ~iwd~~~-------~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~---~~~~~~~~~~~~~v~~~~~~ 153 (312)
++||++. ......+.+|...|.+++|+|++++|++|+.|++|++||+... .++...+.+|...+..+.|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9999853 3456778899999999999999999999999999999998532 24566788999999999999
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCC--cceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCC--------eE
Q 047355 154 PKDLNTFASASLDGTIQIWNMDSS--AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK--------TC 223 (312)
Q Consensus 154 ~~~~~~~~s~s~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~ 223 (312)
|. +.+|++++.|++|++||..+. ++...+.+|...|.++++.+..++.++++|+.|++|++||++++ .+
T Consensus 163 p~-~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 163 PS-EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp SS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred CC-CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence 94 589999999999999998765 56678889999999998644333778999999999999998653 44
Q ss_pred EEEecc-cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcc--eee-ecccCcc-ceEEEEEec--CCCeEEEEecCCe
Q 047355 224 VQILEG-HTNNVTAVCFHPELRIIITASEDGTILIWNATTFR--LQN-TLSSGLE-RVWSIGYKK--GSNQVAFGCDNGT 296 (312)
Q Consensus 224 ~~~~~~-h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~--~~~-~~~~~~~-~v~~~~~~~--~~~~l~~~~~~g~ 296 (312)
...+.+ |...|++++|++++ +|++++.||.|++||..+++ ... ....|.. .|.+++|+| +++.|++|+.||+
T Consensus 242 ~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 242 EAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp EEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred eeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc
Confidence 555655 89999999999765 79999999999999987653 232 3345665 899999999 7899999999999
Q ss_pred EEEEecc
Q 047355 297 LIVKIGN 303 (312)
Q Consensus 297 i~v~~~~ 303 (312)
|+||-.+
T Consensus 321 v~~W~~~ 327 (330)
T 2hes_X 321 VNFWSLE 327 (330)
T ss_dssp EEEEEC-
T ss_pred EEEEEec
Confidence 9999654
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-46 Score=323.34 Aligned_cols=294 Identities=21% Similarity=0.350 Sum_probs=244.6
Q ss_pred chhhhhhhhhcccCcEEEEEE-----cC-CCCeEEEEecCCeEEEEeccCC-------ceeeeEEecCCceeEEEEeeCC
Q 047355 5 LELQIEKEFIQKSDRVKSVDF-----HP-TQPWVLASLYSGTVCIWNYHSQ-------TTEKSVKVTDSPVRTAKFVARE 71 (312)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~-----~~-~~~~l~~~~~dg~v~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~ 71 (312)
.++.....+.+|.+.|++++| +| ++++|++|+.|++|++||+... .....+..|...|.+++|++++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 334455678899999999999 76 8999999999999999998643 2345677888999999999999
Q ss_pred cEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceee-eEecCCccceEEE
Q 047355 72 HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT-QTFEGHSHYVMQS 150 (312)
Q Consensus 72 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~-~~~~~~~~~v~~~ 150 (312)
.++++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||+....... .....|...+..+
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence 999999999999999999999999999999999999999999999999999999999987431111 1123688889999
Q ss_pred EeCCCC---------CCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCC-
Q 047355 151 AFNPKD---------LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET- 220 (312)
Q Consensus 151 ~~~~~~---------~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~- 220 (312)
.|+|.. ..++++++.|++|++||. .......+.+|...+.+++| ++++.+|++|+.|+.|++||+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~--s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSI--SPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEE--CTTSSEEEEEETTCEEEEEESSCC
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEE--CCCCCEEEEEcCCCeEEEEECCCC
Confidence 999864 268999999999999994 45566678899999998875 78999999999999999999943
Q ss_pred CeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceee--ecc-----------cCccceEEEEEecCCCe
Q 047355 221 KTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN--TLS-----------SGLERVWSIGYKKGSNQ 287 (312)
Q Consensus 221 ~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~--~~~-----------~~~~~v~~~~~~~~~~~ 287 (312)
......+ .+...|++++|+|++++++++ .|+.|++||+.+.+... .+. .|...+.+++|+|+|+.
T Consensus 246 ~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 323 (343)
T 2xzm_R 246 TYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK 323 (343)
T ss_dssp SSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC
T ss_pred cccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe
Confidence 3333333 255679999999999877655 58889999998765433 332 46677999999999999
Q ss_pred EEEEecCCeEEEEecc
Q 047355 288 VAFGCDNGTLIVKIGN 303 (312)
Q Consensus 288 l~~~~~~g~i~v~~~~ 303 (312)
|++|+.||+|++|-.+
T Consensus 324 l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 324 LFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEEETTSEEEEEEEE
T ss_pred EEEecCCceEEEEEEE
Confidence 9999999999998654
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.6e-46 Score=325.97 Aligned_cols=284 Identities=21% Similarity=0.355 Sum_probs=248.3
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecC------------------CceeEEEEeeCCcEEEE
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD------------------SPVRTAKFVAREHWIVC 76 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~ 76 (312)
+|.+.|.+++|+|+|++|++|+ ++++++|++.+++....+..+. ..|.+++|++++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6889999999999999999876 7899999998887766554332 23889999999999999
Q ss_pred ecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCC
Q 047355 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD 156 (312)
Q Consensus 77 g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 156 (312)
|+.|+.|++||+.+.+....+.+|...|.+++|+|++++|++++.|++|++||++.. .....+. +...+..+.++|.+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-QCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEE-CSSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC-eeEEEEE-cCCCcEEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999865 3333343 45678889999977
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcceeee-------cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCC--------
Q 047355 157 LNTFASASLDGTIQIWNMDSSAAKFTL-------DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK-------- 221 (312)
Q Consensus 157 ~~~~~s~s~dg~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-------- 221 (312)
+.++++++.|++|++||++++.....+ .+|...+.++.| ++++.+|++|+.|+.|++||+++.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF--TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE--CTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEE--CCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 889999999999999999988766555 578888998875 788999999999999999998653
Q ss_pred ----eEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEec------CCCeEEEE
Q 047355 222 ----TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK------GSNQVAFG 291 (312)
Q Consensus 222 ----~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~ 291 (312)
.+...+.+|...|.+++|+|++++|++|+.|+.|++||..+++....+.+|...|.+++|++ +++.|++|
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sg 376 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG 376 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEE
Confidence 34567788999999999999999999999999999999999999999999999999999876 68999999
Q ss_pred ecCCeEEEEecc
Q 047355 292 CDNGTLIVKIGN 303 (312)
Q Consensus 292 ~~~g~i~v~~~~ 303 (312)
+.||+|+||-.+
T Consensus 377 s~Dg~i~iW~~~ 388 (393)
T 1erj_A 377 SGDCKARIWKYK 388 (393)
T ss_dssp ETTSEEEEEEEE
T ss_pred CCCCcEEECccc
Confidence 999999999754
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.1e-46 Score=341.59 Aligned_cols=290 Identities=20% Similarity=0.325 Sum_probs=246.3
Q ss_pred hhhhcccCcEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 11 KEFIQKSDRVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
..+.+|.+.|++++|+|+++ +|++|+.|++|++||..+.+....+..|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 35678999999999999997 59999999999999998888888888999999999999999999999999999999999
Q ss_pred Cceeeeeec-------ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce---------------------------
Q 047355 90 TMASVKEFE-------AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE--------------------------- 135 (312)
Q Consensus 90 ~~~~~~~~~-------~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~--------------------------- 135 (312)
+++....+. +|.+.|.+++|+|++++|++++.|++|++||+.....
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 888777774 7999999999999999999999999999999875421
Q ss_pred ---------------eeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeee-ccc-------------
Q 047355 136 ---------------CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DAH------------- 186 (312)
Q Consensus 136 ---------------~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~-~~~------------- 186 (312)
....+.+|...+..+.|+| ++..+++++.|++|++||+.+......+ .+|
T Consensus 301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 1123457889999999998 5689999999999999998765432221 111
Q ss_pred --------------------------------------------------------------------ccceeEEEEEEc
Q 047355 187 --------------------------------------------------------------------EKGINCIDYFIT 198 (312)
Q Consensus 187 --------------------------------------------------------------------~~~v~~~~~~~~ 198 (312)
...+.+++ ++
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va--~s 457 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVA--LS 457 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEE--EC
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEE--Ee
Confidence 11233343 57
Q ss_pred CCceEEEEEeCCCeEEEEeCCCCeE--EEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC-cceeee--cccCc
Q 047355 199 SDKVYLITGSDDFTVKVWDYETKTC--VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT-FRLQNT--LSSGL 273 (312)
Q Consensus 199 ~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~-~~~~~~--~~~~~ 273 (312)
|++.++++|+.|+.|++||+.++.. ... .+|...|++++|+|++++|++++.|++|++|++.+ +++... ...|.
T Consensus 458 pdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~ 536 (611)
T 1nr0_A 458 NDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT 536 (611)
T ss_dssp TTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS
T ss_pred CCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecc
Confidence 8999999999999999999987653 233 67999999999999999999999999999999987 665544 33488
Q ss_pred cceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 274 ERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 274 ~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
..|++++|+|||++|++|+.|++|+||-.+.
T Consensus 537 ~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 537 AKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred cceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 9999999999999999999999999998764
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.7e-45 Score=310.09 Aligned_cols=294 Identities=19% Similarity=0.327 Sum_probs=256.4
Q ss_pred hhhhhhhhhcccCcEEEEEEcCC-CCeEEEEecCCeEEEEeccCCc-----eeeeEEecCCceeEEEEeeCCcEEEEecC
Q 047355 6 ELQIEKEFIQKSDRVKSVDFHPT-QPWVLASLYSGTVCIWNYHSQT-----TEKSVKVTDSPVRTAKFVAREHWIVCGSD 79 (312)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~ 79 (312)
++.+..+|.+|.+.|++|+|+|+ +++|++|+.||+|++||+...+ ....+..|...|.++.|++++++|++|+.
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 44455678899999999999998 5799999999999999987543 34566778899999999999999999999
Q ss_pred CCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCC-C
Q 047355 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL-N 158 (312)
Q Consensus 80 dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 158 (312)
|+.|++|+............+...+..+.+++.+.++++++.|+.+++||............+|...+..+.|.+... .
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 999999999998888888888889999999999999999999999999998776565666778899999999987543 4
Q ss_pred EEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEE
Q 047355 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238 (312)
Q Consensus 159 ~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~ 238 (312)
.+++++.|++|++||+++.+....+.+|...|.++++ +|++.+|++|+.|+.|++||+++.+.+..+.. ...|.+++
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~ 263 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTV--SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALC 263 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--CTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEE--CCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeee
Confidence 6789999999999999999999999999999999875 78899999999999999999999999888874 46799999
Q ss_pred EeCCCcEEEEEeCCCcEEEEeCCCcceeeecc---------cCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 239 FHPELRIIITASEDGTILIWNATTFRLQNTLS---------SGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 239 ~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
|+|++. +++++.|+.|++||+++......+. .|...|.+++|+|++++|++|+.||+|+||-..
T Consensus 264 ~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 264 FSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp ECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 999876 5566679999999998876554433 566789999999999999999999999999654
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.7e-45 Score=334.04 Aligned_cols=284 Identities=15% Similarity=0.174 Sum_probs=250.5
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce--e
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA--S 93 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~ 93 (312)
+.+.+.+++|+|+|++|++++ ++.|++|++...+....+..|...|.+++|+|++++|++|+.|++|++||+.+.+ .
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~ 95 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 95 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred ccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCccee
Confidence 456889999999999999887 5799999998888888899999999999999999999999999999999986543 4
Q ss_pred eeeecccccceeEEEEecCCCEEEEEeCC----CcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDD----KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 94 ~~~~~~h~~~i~~~~~~~~~~~l~t~s~d----~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
...+.+|.++|.+++|+|+++.|++++.+ +.|++||.. .....+.+|...|..+.|+|.+...+++++.|++|
T Consensus 96 ~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~---~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v 172 (611)
T 1nr0_A 96 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG---TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 172 (611)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC---CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred eEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC---CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeE
Confidence 45678999999999999999999988865 478888743 33456789999999999999765679999999999
Q ss_pred EEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec-------ccccCeEEEEEeCC
Q 047355 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-------GHTNNVTAVCFHPE 242 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-------~h~~~i~~l~~~~~ 242 (312)
++||..+.+....+.+|...|.+++| +|++.+|++|+.|++|++||..++++...+. +|.+.|++++|+|+
T Consensus 173 ~lwd~~~~~~~~~l~~H~~~V~~v~f--spdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 173 AIFEGPPFKFKSTFGEHTKFVHSVRY--NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp EEEETTTBEEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred EEEECCCCeEeeeeccccCceEEEEE--CCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence 99999988888889999999999985 7899999999999999999999999888874 79999999999999
Q ss_pred CcEEEEEeCCCcEEEEeCCCcceeee-------------------------------------------cccCccceEEE
Q 047355 243 LRIIITASEDGTILIWNATTFRLQNT-------------------------------------------LSSGLERVWSI 279 (312)
Q Consensus 243 ~~~l~s~s~dg~v~iwd~~~~~~~~~-------------------------------------------~~~~~~~v~~~ 279 (312)
+++|++++.|++|++||+.+++...+ +.+|...|.++
T Consensus 251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 99999999999999999987654432 34577789999
Q ss_pred EEecCCCeEEEEecCCeEEEEeccCC
Q 047355 280 GYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 280 ~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
+|+|+++.|++++.||+|++|-....
T Consensus 331 ~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 331 SSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 99999999999999999999976543
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-44 Score=328.01 Aligned_cols=280 Identities=29% Similarity=0.468 Sum_probs=253.8
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
+.+.+|...|.+++|+|+++++++++.||+|++||.... ....+..+...+.+++|+|++++|++|+.|+.|++||..
T Consensus 297 ~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~- 374 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN- 374 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-
T ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-
Confidence 446678899999999999999999999999999998654 455677788899999999999999999999999999964
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
.+.+..+.+|...|.+++|+|++++|++++.|+.|++||... +....+.+|...+..+.|+|. ...+++++.|++|+
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 375 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPD-DQTIASASDDKTVK 451 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCC-CCEEEEEcCCCEEE
Confidence 567788899999999999999999999999999999999643 456778899999999999984 58999999999999
Q ss_pred EEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEe
Q 047355 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
+||. +.+....+.+|...+.++++ +|++.+|++++.|+.|++||. ++++++.+.+|...|++++|+|++++|++++
T Consensus 452 ~w~~-~~~~~~~~~~~~~~v~~~~~--spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 452 LWNR-NGQLLQTLTGHSSSVRGVAF--SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp EEET-TSCEEEEEECCSSCEEEEEE--CTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEC-CCCEEEEEcCCCCCEEEEEE--cCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 9996 45667788899999998875 789999999999999999995 6788899999999999999999999999999
Q ss_pred CCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 251 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
.|+.|++||. +++.+.++.+|...|++++|+||+++|++++.||+|++|
T Consensus 528 ~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 528 DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 9999999996 578888999999999999999999999999999999998
No 19
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.7e-44 Score=339.39 Aligned_cols=298 Identities=55% Similarity=1.023 Sum_probs=271.1
Q ss_pred chhhhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEE
Q 047355 5 LELQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84 (312)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~ 84 (312)
|++.+.+.+.+|.+.|.+++|+|++++|++++.||.|++||+.+++....+..|..+|.++.|++++++|++|+.||.|+
T Consensus 1 m~l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CCcccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 35567788999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred EEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe
Q 047355 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS 164 (312)
Q Consensus 85 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 164 (312)
+||+.+++....+.+|...|.+++|+|+++++++++.||.|++||+.........+.+|...+..+.|+|.++..+++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999998765667788899999999999996678999999
Q ss_pred CCCeEEEEEcCCCcceeeecccc-cceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCC
Q 047355 165 LDGTIQIWNMDSSAAKFTLDAHE-KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243 (312)
Q Consensus 165 ~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~ 243 (312)
.||+|++||+++......+..+. ..+.++++.+.+++.++++|+.||.|++||.++++.+..+.+|...|++++|+|++
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 99999999998887777766554 78888887655589999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCC--eEEEEecCCeEEEEec
Q 047355 244 RIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN--QVAFGCDNGTLIVKIG 302 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~g~i~v~~~ 302 (312)
+++++++.||.|++||..+++....+..+...+++++|+|++. .++++++++.+.+...
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 9999999999999999999999999999999999999999987 4666666665555543
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.5e-44 Score=332.45 Aligned_cols=288 Identities=21% Similarity=0.340 Sum_probs=249.0
Q ss_pred hhhhcccCcEEEEEEcCCC-CeEEEEecCCeEEEEeccCC-----ceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEE
Q 047355 11 KEFIQKSDRVKSVDFHPTQ-PWVLASLYSGTVCIWNYHSQ-----TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIR 84 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~ 84 (312)
..+.+|.+.|++++|+|++ ++|++|+.|++|++|++... .....+..|...|.+++|++++++|++|+.||+|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3577899999999999875 68999999999999998753 23456788999999999999999999999999999
Q ss_pred EEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceee--eEecCCccceEEEEeCCCC-CCEEE
Q 047355 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT--QTFEGHSHYVMQSAFNPKD-LNTFA 161 (312)
Q Consensus 85 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~~~~~ 161 (312)
+||+.++.....+.+|...|.+++|+|++++|++++.|++|++||........ ....+|...+.++.|+|.. ...++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 99999999999999999999999999999999999999999999976432211 1124688899999999865 35899
Q ss_pred EEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeC
Q 047355 162 SASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241 (312)
Q Consensus 162 s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~ 241 (312)
+++.|++|++||+++.+....+.+|...|.++++ ++++.+|++|+.||.|++||+++++.+..+. +...|++++|+|
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~--spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 612 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV--SPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSP 612 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECS
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE--eCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcC
Confidence 9999999999999999988899999999999875 7889999999999999999999999888776 456799999999
Q ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeecccCc-------------------cceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 242 ELRIIITASEDGTILIWNATTFRLQNTLSSGL-------------------ERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 242 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
++.++++++ |+.|++||+.+.+....+..+. ..+.+++|+|+|+.|++|+.||+|+||-.
T Consensus 613 ~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 613 NRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 998877766 5669999999887766554321 12688999999999999999999999954
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.5e-44 Score=302.63 Aligned_cols=248 Identities=23% Similarity=0.378 Sum_probs=231.9
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
...+.+|...|.+++|+|+++++++++.|++|++||+.+++....+..+...+..++|+|++++|++|+.||.|++|+++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 34577899999999999999999999999999999999998888888888889999999999999999999999999999
Q ss_pred CceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 90 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
+.+....+..|...|.+++|+|++++|++|+.|+.|++||+... +....+.+|...+..+.|+| ++.+|++++.|++|
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i 230 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYI 230 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCE
T ss_pred CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeE
Confidence 99888888999999999999999999999999999999999865 56678889999999999998 45899999999999
Q ss_pred EEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEE
Q 047355 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 249 (312)
++||+++......+.+|...+.+++| +|++.+|++|+.|+.|++||+++++++..+.+|.+.|++++|+|++++|+++
T Consensus 231 ~iwd~~~~~~~~~~~~h~~~v~~~~~--sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 231 KIYDVQHANLAGTLSGHASWVLNVAF--CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCcceeEEEcCCCCceEEEEE--CCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 99999999888899999999998875 7889999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEeCC
Q 047355 250 SEDGTILIWNAT 261 (312)
Q Consensus 250 s~dg~v~iwd~~ 261 (312)
+.|++|++||++
T Consensus 309 ~~d~~i~vwd~p 320 (321)
T 3ow8_A 309 GDDQEIHIYDCP 320 (321)
T ss_dssp ETTCCEEEEECC
T ss_pred eCCCeEEEEeCC
Confidence 999999999974
No 22
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8e-44 Score=310.72 Aligned_cols=290 Identities=12% Similarity=0.178 Sum_probs=257.5
Q ss_pred hhhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc------eeeeEEecCCceeEEEEeeC----C---cE
Q 047355 7 LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT------TEKSVKVTDSPVRTAKFVAR----E---HW 73 (312)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~ 73 (312)
+...+.+.+|.+.|++++|+| ++|++|+.||.|++|++...+ ....+..|..+|.++.|+++ + .+
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 445567889999999999999 899999999999999998877 67788889999999999999 9 99
Q ss_pred EEEecCCCeEEEEEccCcee-----eeeeccc-----ccceeEEEEe----cCCCE-EEEEeCCCcEEEEeCCC------
Q 047355 74 IVCGSDDKFIRVFDYNTMAS-----VKEFEAH-----EDYIRSLAVH----PTFPF-VLTASDDKLIKLWDWEK------ 132 (312)
Q Consensus 74 l~~g~~dg~i~iwd~~~~~~-----~~~~~~h-----~~~i~~~~~~----~~~~~-l~t~s~d~~v~iwd~~~------ 132 (312)
|++++.||.|++||+.+.+. ...+..| ...|.+++|+ |++++ +++++.||.|++||+..
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999988776 7888888 5899999999 99999 99999999999999876
Q ss_pred Cceeee-----Ee-------cCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecc---c---ccceeEEE
Q 047355 133 NWECTQ-----TF-------EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDA---H---EKGINCID 194 (312)
Q Consensus 133 ~~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~---~---~~~v~~~~ 194 (312)
. .... .+ ..|...+..+.|+|.+ .+++++.|+.|++||+++.+....+.. | ...+.++.
T Consensus 164 ~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 164 S-LTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp H-TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred c-ceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 3 2222 44 4478889999999954 999999999999999999988888888 8 88899887
Q ss_pred EEEcCCceEEEEEeCC---CeEEEEeCCCCeEEEEecc-------------cccCeEEEEEeCCCcEEEEEeCCCcEEEE
Q 047355 195 YFITSDKVYLITGSDD---FTVKVWDYETKTCVQILEG-------------HTNNVTAVCFHPELRIIITASEDGTILIW 258 (312)
Q Consensus 195 ~~~~~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~-------------h~~~i~~l~~~~~~~~l~s~s~dg~v~iw 258 (312)
+ ++++.+|++++.| +.|++||+++++.+..+.+ |...|++++|+|++++|++++.||.|++|
T Consensus 241 ~--~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 241 F--SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp E--CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred E--CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 5 6788999999999 9999999999999999998 99999999999999999999999999999
Q ss_pred eCCCcceeeecc------cC---------------ccceEEEEEecCC----------CeEEEEecCCeEEEEecc
Q 047355 259 NATTFRLQNTLS------SG---------------LERVWSIGYKKGS----------NQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 259 d~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~~~~~~g~i~v~~~~ 303 (312)
|+.+++....+. .+ ...|.+++|+|++ +.|++++.||.|+||-.+
T Consensus 319 d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 319 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 999999888888 77 8899999999999 799999999999998654
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-43 Score=300.73 Aligned_cols=289 Identities=13% Similarity=0.197 Sum_probs=261.2
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
.++.+|.+.|.+++|+|++++|++++.||.|++||+.+.+....+..|...|.+++|++++++|++++.||.|++||+.+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 45778999999999999999999999999999999999998899998999999999999999999999999999999999
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCC-----CcEEEEeCCCCce----------eeeEecCCcc--ceEEEEeC
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDD-----KLIKLWDWEKNWE----------CTQTFEGHSH--YVMQSAFN 153 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d-----~~v~iwd~~~~~~----------~~~~~~~~~~--~v~~~~~~ 153 (312)
++....+. |...|.+++|+|+++++++++.+ +.+++||+..... ....+..|.. .+..+.|+
T Consensus 106 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 106 GQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 88887777 88899999999999999999999 9999999754321 2234445555 88999999
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCC-CcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccccc
Q 047355 154 PKDLNTFASASLDGTIQIWNMDS-SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTN 232 (312)
Q Consensus 154 ~~~~~~~~s~s~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 232 (312)
| ++..+++++.||.|++||+++ ......+..|...+.++.+ ++++.+|++++.|+.|++||+++++.+..+. +..
T Consensus 185 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~ 260 (369)
T 3zwl_B 185 T-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQF--SPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDC 260 (369)
T ss_dssp G-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS
T ss_pred C-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEE--CCCCCEEEEecCCceEEEEECCCCceeeeec-CCC
Confidence 8 567999999999999999998 6777788889999998875 6789999999999999999999999888887 788
Q ss_pred CeEEEEEeCCCcEEEEEeCCC--------------cEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 233 NVTAVCFHPELRIIITASEDG--------------TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg--------------~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
.+.+++|+|+++++++++.++ .+++||..+.+....+..|...|.+++|+|++++|++++.||+|+
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 899999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred EEeccC
Q 047355 299 VKIGNS 304 (312)
Q Consensus 299 v~~~~~ 304 (312)
||-.+.
T Consensus 341 iw~~~~ 346 (369)
T 3zwl_B 341 LHHFEK 346 (369)
T ss_dssp EEEECH
T ss_pred EEECcc
Confidence 997653
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=303.28 Aligned_cols=246 Identities=20% Similarity=0.285 Sum_probs=210.3
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeee----EEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKS----VKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
++...|.+++|+|++ .|++|+.||+|+|||+.+++.... ...|...|.+++|++++++|++|+.|++|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 345789999999985 688999999999999987765443 346888999999999999999999999999999999
Q ss_pred ceeeeeecccccceeEEEEecCCC-EEEEEeCCCcEEEEeCCCCceeeeEe--cCCccceEEEEeCCCCCCEEEEEeCCC
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTF--EGHSHYVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s~s~dg 167 (312)
++.+..+.+|...|.+++|+|++. ++++++.|++|++||++.... ...+ ..+...+..+.|+|.+..++++|+.||
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce-eeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 999999999999999999999875 688999999999999986533 3333 345567889999998888999999999
Q ss_pred eEEEEEcCCCcceeeecccccceeEEEEEEcCCc-eEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCc-E
Q 047355 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK-VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR-I 245 (312)
Q Consensus 168 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~-~ 245 (312)
+|++||+++.+.+..+.+|...|.+++| +|++ .+|++|+.|++|++||++++++.. +.+|.+.|++++|+|+++ +
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~f--sp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVF--SPHSVPFLASLSEDCSLAVLDSSLSELFR-SQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEE--CSSSSCCEEEEETTSCEEEECTTCCEEEE-ECCCSSCEEEEEECSSSTTE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEE--ccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcCCCCCEEEEEEeCCCCeE
Confidence 9999999999999999999999999885 6666 679999999999999999887654 678999999999999876 6
Q ss_pred EEEEeCCCcEEEEeCCCcce
Q 047355 246 IITASEDGTILIWNATTFRL 265 (312)
Q Consensus 246 l~s~s~dg~v~iwd~~~~~~ 265 (312)
|++||.|++|++|++.+..+
T Consensus 315 las~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEEETTSCEEEEECCC---
T ss_pred EEEEcCCCeEEEEECCCCCC
Confidence 77999999999999987543
No 25
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-44 Score=314.41 Aligned_cols=248 Identities=24% Similarity=0.485 Sum_probs=231.4
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
.+.+.+|.+.|.+++|+|++++|++|+.|++|++||+.+.+....+..|...|.++.|+|++++|++|+.|++|++||+.
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~ 222 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 222 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45677899999999999999999999999999999999988888898999999999999999999999999999999999
Q ss_pred CceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCC-------------
Q 047355 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKD------------- 156 (312)
Q Consensus 90 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~------------- 156 (312)
++..++.+.+|...|.++.++|++.++++|+.|+.|++||+... .....+.+|...+..+.|+|..
T Consensus 223 ~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence 99999999999999999999999999999999999999998765 5566788999999999999852
Q ss_pred ------CCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc
Q 047355 157 ------LNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH 230 (312)
Q Consensus 157 ------~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 230 (312)
+.++++|+.|++|++||++++.....+.+|...|.++.+ ++++.+|++|+.|+.|++||+.+++++..+.+|
T Consensus 302 ~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~--~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp ------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--CSSSSCEEEEETTTEEEEECCTTSCCCEEEECC
T ss_pred cccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 468999999999999999999999999999999998875 788999999999999999999999999999999
Q ss_pred ccCeEEEEEeCCCcEEEEEeCCCcEEEEeC
Q 047355 231 TNNVTAVCFHPELRIIITASEDGTILIWNA 260 (312)
Q Consensus 231 ~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~ 260 (312)
...|++++|+|++++|++|+.|++|++|++
T Consensus 380 ~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999999999999999986
No 26
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.8e-44 Score=306.86 Aligned_cols=284 Identities=17% Similarity=0.346 Sum_probs=245.9
Q ss_pred hhcccCcEEEEEEcCC----CCeEEEEecCCeEEEEeccCCceeeeEEe-----cCCceeEEEEeeC----CcEEEEecC
Q 047355 13 FIQKSDRVKSVDFHPT----QPWVLASLYSGTVCIWNYHSQTTEKSVKV-----TDSPVRTAKFVAR----EHWIVCGSD 79 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~----~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~g~~ 79 (312)
..+|.++|.+++|+|+ ...+++++.++.|++|++.+.+....+.. +...+.+++|+++ +.+|++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3478999999999984 56788888889999999987776666654 3467999999998 679999999
Q ss_pred CCeEEEEEccCceeeeeecccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeeeEe---cCCccceEEEEeCCC
Q 047355 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNWECTQTF---EGHSHYVMQSAFNPK 155 (312)
Q Consensus 80 dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~ 155 (312)
||.|++||+.+.+.+..+.+|...|.+++|+| ++.++++++.||.|++||++.. .....+ ..|...+..+.|+|
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~- 171 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD-TLVAIFGGVEGHRDEVLSADYDL- 171 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT-EEEEEECSTTSCSSCEEEEEECT-
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC-eEEEEecccccccCceeEEEECC-
Confidence 99999999999999999999999999999999 8999999999999999999865 444555 68999999999998
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcceeeec----------------------------ccccceeEEEEEEcCCceEEEEE
Q 047355 156 DLNTFASASLDGTIQIWNMDSSAAKFTLD----------------------------AHEKGINCIDYFITSDKVYLITG 207 (312)
Q Consensus 156 ~~~~~~s~s~dg~v~iwd~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~~~l~sg 207 (312)
++..+++++.||.|++||+++.+....+. .|...+.++.+. +.+++++
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~ 247 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL----GDLILSK 247 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE----TTEEEEE
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc----CCEEEEE
Confidence 56899999999999999998765443333 388889999874 5689999
Q ss_pred eCCCeEEEEeCCCC--------------eEEEEecccccCeEEEEEeCC--CcEEEEEeCCCcEEEEeCCCccee----e
Q 047355 208 SDDFTVKVWDYETK--------------TCVQILEGHTNNVTAVCFHPE--LRIIITASEDGTILIWNATTFRLQ----N 267 (312)
Q Consensus 208 ~~dg~i~vwd~~~~--------------~~~~~~~~h~~~i~~l~~~~~--~~~l~s~s~dg~v~iwd~~~~~~~----~ 267 (312)
+.|+.|++||+.+. ..+..+..|...|++++|+|+ +++|++|+.||.|++||+.+++.. .
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 327 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT 327 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence 99999999998765 347788899999999999999 999999999999999999987543 3
Q ss_pred ecccC--ccceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 268 TLSSG--LERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 268 ~~~~~--~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
.+..+ ...|.+++|+|+++.|++++.||.|++|-.
T Consensus 328 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 328 TLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 66666 688999999999999999999999999854
No 27
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-43 Score=294.31 Aligned_cols=286 Identities=20% Similarity=0.290 Sum_probs=253.9
Q ss_pred hhhhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEE
Q 047355 7 LQIEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVF 86 (312)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 86 (312)
+.+.+.+.+|.+.|.+++| |++++|++++.||.|++||+.+.+....+..+...+.+++|++++++|++|+.||.|++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3556778899999999999 999999999999999999999888888888899999999999999999999999999999
Q ss_pred EccCc---eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEE
Q 047355 87 DYNTM---ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA 163 (312)
Q Consensus 87 d~~~~---~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 163 (312)
++... +....+..|...|.++++ +++++++++.|+.+++|| .......+..|...+..+.+.|.+.+.++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 98654 456778899999999999 467899999999999999 2355667888999999999998777899999
Q ss_pred eCCCeEEEEEcCCCcceeeecc-cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCC
Q 047355 164 SLDGTIQIWNMDSSAAKFTLDA-HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPE 242 (312)
Q Consensus 164 s~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~ 242 (312)
+.|+.|++||. ......+.. |...+.++.+. +++. +++++.||.|++||+++++.+..+.+|...|++++|+|+
T Consensus 162 ~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~--~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 162 SADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVV--DDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp ETTSCEEEEET--TEEEEEECSSCSSCEEEEEEE--ETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred ECCCCEEEEec--CceEEEEeccCcccEEEEEEc--CCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 99999999993 444555555 88889988864 5566 899999999999999999999999999999999999999
Q ss_pred CcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccCC
Q 047355 243 LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 243 ~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
+ .|++++.||.|++||+.+++....+..+...+.+++|+|+++ +++++.||.|++|-.+..
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 8 599999999999999999999999999999999999999998 667999999999987654
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-42 Score=299.27 Aligned_cols=286 Identities=15% Similarity=0.127 Sum_probs=247.8
Q ss_pred hcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc--eeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 14 IQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT--TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
..|.++|.+++|+|++++|++++.|+.|++||+.+.+ ....+..|...|.+++|++++++|++++.||.|++||+++.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 3478899999999999999999999999999998876 77788889999999999999999999999999999999887
Q ss_pred eeee--eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce---eeeEecCCccceEEEEeCCCCCCEEEEEeCC
Q 047355 92 ASVK--EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE---CTQTFEGHSHYVMQSAFNPKDLNTFASASLD 166 (312)
Q Consensus 92 ~~~~--~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d 166 (312)
+... .+..|...|.+++|+|+++++++++.|+.+++||+..... .......|...+..+.|+| +...+++++.|
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d 163 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCD 163 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEETT
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEEEcCC
Confidence 6443 3467899999999999999999999999999999876532 2233467889999999998 45899999999
Q ss_pred CeEEEEEcC------------------CCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec
Q 047355 167 GTIQIWNMD------------------SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE 228 (312)
Q Consensus 167 g~v~iwd~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 228 (312)
+.|++||++ ..+....+..|...+.++.+ ++++.++++++.|+.|++||+++++++..+.
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF--SANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE--CSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE--CCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 999999964 45667777888889998875 6788899999999999999999999999999
Q ss_pred ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC--cc--ee------------------------------------ee
Q 047355 229 GHTNNVTAVCFHPELRIIITASEDGTILIWNATT--FR--LQ------------------------------------NT 268 (312)
Q Consensus 229 ~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~--~~--~~------------------------------------~~ 268 (312)
.|..+|++++|+|+++++++| .|+.|++|++.+ ++ .. ..
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence 999999999999999988887 899999999877 31 10 22
Q ss_pred c-ccCccceEEEEEe-cCC---CeEEEEecCCeEEEEecc
Q 047355 269 L-SSGLERVWSIGYK-KGS---NQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 269 ~-~~~~~~v~~~~~~-~~~---~~l~~~~~~g~i~v~~~~ 303 (312)
+ .+|...|.+++|. ++| ++|++|+.||+|+||-.+
T Consensus 321 ~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 321 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 3 3788899999976 666 999999999999999754
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-41 Score=290.38 Aligned_cols=281 Identities=16% Similarity=0.238 Sum_probs=245.3
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceee---eEE--ecCCceeEEEEeeCCcEEEEecCCCeEEEEE
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEK---SVK--VTDSPVRTAKFVAREHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~---~~~--~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd 87 (312)
..+|.+.|.+++|+|++++|++++ ||.|++|++....... .+. .+...+.++.|++++++|++++.|+.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 347889999999999999999998 9999999998654332 233 5778999999999999999999999999999
Q ss_pred ccCce--eeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 88 YNTMA--SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 88 ~~~~~--~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
+++.+ ....+..|...|.+++++|+++++++++.|+.|++||++.. .....+..|...+..+.|+| ++..+++++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 203 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISN-DGTKLWTGGL 203 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-ceeeeeecccCceEEEEECC-CCCEEEEEec
Confidence 98876 56677889999999999999999999999999999998865 55677888999999999998 4589999999
Q ss_pred CCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcE
Q 047355 166 DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 245 (312)
|+.|++||+++.+....+ .+...+.++.+ ++++.++++++.|+.|++||+++.+.. .+..|...|++++|+|++++
T Consensus 204 dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~--s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQH-DFTSQIFSLGY--CPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp TSEEEEEETTTTEEEEEE-ECSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSE
T ss_pred CCcEEEEECCCCceEeee-cCCCceEEEEE--CCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCE
Confidence 999999999988776655 45667777764 788999999999999999999887754 56779999999999999999
Q ss_pred EEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 246 IITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 246 l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
|++++.||.|++||+.+++.... ..+...+.+++|+|+++.|++++.||.+++|-
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 99999999999999998877644 34677899999999999999999999999884
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-44 Score=312.24 Aligned_cols=286 Identities=19% Similarity=0.274 Sum_probs=247.9
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccC----CceeeeEEecCCceeEEEEeeC-CcEEEEecCCCeEEEEEcc
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS----QTTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~ 89 (312)
.|...|.+++|+|++++|++++.||.|++|++.. .+....+..|...|.+++|+++ +.+|++|+.|+.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5788999999999999999999999999999987 3466777888999999999998 8999999999999999998
Q ss_pred Cce------ee---eeecccccceeEEEEecC-CCEEEEEeCCCcEEEEeCCCCceeeeEecCC------ccceEEEEeC
Q 047355 90 TMA------SV---KEFEAHEDYIRSLAVHPT-FPFVLTASDDKLIKLWDWEKNWECTQTFEGH------SHYVMQSAFN 153 (312)
Q Consensus 90 ~~~------~~---~~~~~h~~~i~~~~~~~~-~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~------~~~v~~~~~~ 153 (312)
+.. .. .....|...|.+++|+|+ +.++++++.|+.|++||++.. .....+..+ ...+..+.|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-KEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-EEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-CcceEEeccccccccCCceEEEEEC
Confidence 775 22 234679999999999998 789999999999999999875 445555555 7889999999
Q ss_pred CCCCCEEEEEeCCC---eEEEEEcCCC-cceeeec-ccccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEe
Q 047355 154 PKDLNTFASASLDG---TIQIWNMDSS-AAKFTLD-AHEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQIL 227 (312)
Q Consensus 154 ~~~~~~~~s~s~dg---~v~iwd~~~~-~~~~~~~-~~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 227 (312)
|.+..++++++.|+ .|++||+++. .....+. +|...+.++.| ++ ++.+|++++.|+.|++||+++++++..+
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDW--CHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEE--CSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEe--CCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 97667999999999 9999999986 5666777 89999999885 56 7889999999999999999999999999
Q ss_pred cccccCeEEEEEeCCC-cEEEEEeCCCcEEEEeCCCcceeeeccc-----------------------------------
Q 047355 228 EGHTNNVTAVCFHPEL-RIIITASEDGTILIWNATTFRLQNTLSS----------------------------------- 271 (312)
Q Consensus 228 ~~h~~~i~~l~~~~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~----------------------------------- 271 (312)
.+|...|++++|+|++ .+|++++.|+.|++||+.+.+.......
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTW 381 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCST
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcc
Confidence 9999999999999998 8999999999999999987654333211
Q ss_pred CccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 272 GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 272 ~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
+...+.+++|+|+|++|++++.||+|+||-..
T Consensus 382 ~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 382 YGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp TCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred ccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 45567799999999999999999999988654
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3e-42 Score=290.95 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=226.5
Q ss_pred ceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEe
Q 047355 50 TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129 (312)
Q Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd 129 (312)
+..+++..|...|.+++|+|++++|++|+.||.|++||++++..+..+..|..+|.+++|+|++++|++|+.|+.|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 34667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC-cceeeecccccceeEEEEEEcC-CceEEEEE
Q 047355 130 WEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS-AAKFTLDAHEKGINCIDYFITS-DKVYLITG 207 (312)
Q Consensus 130 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg 207 (312)
+.+. +....+.+|...|..+.|+|. ..++++++.|++|++||+++. .....+.+|...+.+++| +| ++.++++|
T Consensus 84 ~~~~-~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~l~sg 159 (304)
T 2ynn_A 84 YNTG-EKVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF--NPKDPSTFASG 159 (304)
T ss_dssp TTTC-CEEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEE--CTTCTTEEEEE
T ss_pred CCCC-cEEEEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEE--CCCCCCEEEEE
Confidence 8876 556778999999999999985 579999999999999999876 445678899999999986 45 57889999
Q ss_pred eCCCeEEEEeCCCCeEEEEe-cccccCeEEEEEeC--CCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecC
Q 047355 208 SDDFTVKVWDYETKTCVQIL-EGHTNNVTAVCFHP--ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284 (312)
Q Consensus 208 ~~dg~i~vwd~~~~~~~~~~-~~h~~~i~~l~~~~--~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 284 (312)
+.|+.|++||+++......+ .+|...+..++|+| ++++|++|+.|++|++||+.+++...++..|...|.+++|+|+
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence 99999999999876654444 45668899999987 7789999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCeEEEEeccCC
Q 047355 285 SNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 285 ~~~l~~~~~~g~i~v~~~~~~ 305 (312)
++.|++|+.||+|+||-.+.-
T Consensus 240 ~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 240 LPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp SSEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEECCCC
Confidence 999999999999999987643
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.8e-42 Score=312.67 Aligned_cols=282 Identities=29% Similarity=0.444 Sum_probs=253.9
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
..+.+|...|.+++|+|+++.|++++.|+.|++|+.. .+....+..|...+..++|+|+++.|++++.|+.|++||...
T Consensus 256 ~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~ 334 (577)
T 2ymu_A 256 QTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG 334 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 4466788999999999999999999999999999975 456677788889999999999999999999999999999876
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
. .+..+.+|...|.+++++|+++++++++.|+.+++||... .....+.+|...+..+.|+| ++.++++++.|+.|+
T Consensus 335 ~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 335 Q-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVK 410 (577)
T ss_dssp C-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC--CEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEE
T ss_pred C-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC--CEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEE
Confidence 4 4567889999999999999999999999999999999643 45677889999999999998 457899999999999
Q ss_pred EEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEe
Q 047355 171 IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
+||. +.+....+.+|...+.++++ +|++.++++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~--s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAF--SPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEE--CTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEE--CCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 9996 45667778899999998874 789999999999999999996 5677888899999999999999999999999
Q ss_pred CCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 251 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
.|+.|++||. +++...++..|...|.+++|+|++++|++++.||+|+||-.
T Consensus 487 ~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 487 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp TTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 9999999995 67888899999999999999999999999999999999853
No 33
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.2e-43 Score=300.87 Aligned_cols=290 Identities=15% Similarity=0.230 Sum_probs=240.7
Q ss_pred hhhcccCcEEEEEEcCCCCeEE-EEec---CCeEEEEeccCCceeeeE-EecCCceeEEEEeeC---CcEEEEecCCCeE
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVL-ASLY---SGTVCIWNYHSQTTEKSV-KVTDSPVRTAKFVAR---EHWIVCGSDDKFI 83 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~-~~~~---dg~v~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~g~~dg~i 83 (312)
.+.+|.+.|.+++|+|+++.++ +|+. ||.|++||+.+.+..... ..+..+|.+++|+++ +.+|++|+.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 4567999999999999997665 4554 999999999887665443 367789999999998 6999999999999
Q ss_pred EEEEccCce-eeeeecccccceeEEEE------ecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc----ceEEEE-
Q 047355 84 RVFDYNTMA-SVKEFEAHEDYIRSLAV------HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH----YVMQSA- 151 (312)
Q Consensus 84 ~iwd~~~~~-~~~~~~~h~~~i~~~~~------~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~----~v~~~~- 151 (312)
++||+.+.+ ....+.+|...|.++.+ +|+++++++++.|+.|++||+.........+..|.. .+..+.
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEE
Confidence 999999887 78889999999999955 678999999999999999999876545566655443 677777
Q ss_pred ---eCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcC---CceEEEEEeCCCeEEEEeCCCCeEEE
Q 047355 152 ---FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS---DKVYLITGSDDFTVKVWDYETKTCVQ 225 (312)
Q Consensus 152 ---~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~ 225 (312)
|+| +...+++++.|+.|++||+++.+.. ....|...+.++.+ ++ ++.++++|+.||.|++||+++++...
T Consensus 173 ~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 173 GNAYNQ-EERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSLEF--DRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp ECCCC--CCCEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEE--SCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EeccCC-CCCEEEEEccCCeEEEEECccCcee-eecCCCCceEEEEc--CCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 555 5689999999999999999987764 34667788888875 56 78899999999999999987654433
Q ss_pred -----EecccccCeEEEEEeCCCc-EEEEEeCCCcEEEEeCCCc-------------------ceeeecccCccceEEEE
Q 047355 226 -----ILEGHTNNVTAVCFHPELR-IIITASEDGTILIWNATTF-------------------RLQNTLSSGLERVWSIG 280 (312)
Q Consensus 226 -----~~~~h~~~i~~l~~~~~~~-~l~s~s~dg~v~iwd~~~~-------------------~~~~~~~~~~~~v~~~~ 280 (312)
.+.+|...|++++|+|+++ +|++++.||.|++||+.+. +.+..+..|...|.+++
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~ 328 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD 328 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence 3348999999999999998 8999999999999998753 35667778888999999
Q ss_pred EecCCCeEE-EEecCCeEEEEeccCC
Q 047355 281 YKKGSNQVA-FGCDNGTLIVKIGNSS 305 (312)
Q Consensus 281 ~~~~~~~l~-~~~~~g~i~v~~~~~~ 305 (312)
|+|+++.|+ +++.||.|+||-....
T Consensus 329 ~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 329 WSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999999 7999999999976543
No 34
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-42 Score=301.67 Aligned_cols=283 Identities=17% Similarity=0.213 Sum_probs=247.2
Q ss_pred cccCcEEEEEEcCCCC-eEEEEecCCeEEEEec----cCCc------eeeeEEe----------cCCceeEEEEeeCCcE
Q 047355 15 QKSDRVKSVDFHPTQP-WVLASLYSGTVCIWNY----HSQT------TEKSVKV----------TDSPVRTAKFVAREHW 73 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~~ 73 (312)
.|.+.|.+++|+|+++ +|++|+.||.|++|++ .+++ ....+.. +...|.+++|++++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 3458999999999999 9999999999999999 7766 3444443 5668999999999999
Q ss_pred EEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee-----------------
Q 047355 74 IVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC----------------- 136 (312)
Q Consensus 74 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~----------------- 136 (312)
|++|+.||.|++|| .++.....+..|...|.+++|+|+++++++++.|+.+++||+......
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 99999999999999 556778888999999999999999999999999999999998643211
Q ss_pred --------------------------------------eeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCc
Q 047355 137 --------------------------------------TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178 (312)
Q Consensus 137 --------------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~ 178 (312)
...+..|...+..+.|+|. ...+++++.|+.|++||+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT-NKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp ----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT-TTEEEEEETTSCEEEECSSSBS
T ss_pred ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCc
Confidence 1234467778899999984 5799999999999999999998
Q ss_pred ceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEE
Q 047355 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258 (312)
Q Consensus 179 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iw 258 (312)
....+..|...+.++.+ ++++ ++++++.|+.|++||+++++.+..+..|...|++++|+|++++|++++.||.|++|
T Consensus 281 ~~~~~~~~~~~i~~~~~--~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 281 SQNCFYGHSQSIVSASW--VGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp CSEEECCCSSCEEEEEE--ETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceEecCCCccEEEEEE--CCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 88888899999998886 5677 89999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcc--------------------eeeecccCcc--ceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 259 NATTFR--------------------LQNTLSSGLE--RVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 259 d~~~~~--------------------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
|+.+.+ ....+..+.. .|.+++|+|++++|++++.||.|++|-.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 998887 7888888866 9999999999999999999999999854
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-42 Score=300.68 Aligned_cols=285 Identities=16% Similarity=0.236 Sum_probs=238.7
Q ss_pred hhhhhcccCcEEEEEEcCCC-CeEEEEecCCeEEEEeccCCceeeeEE--ecCCceeEEEEee-CCcEEEEecCCCeEEE
Q 047355 10 EKEFIQKSDRVKSVDFHPTQ-PWVLASLYSGTVCIWNYHSQTTEKSVK--VTDSPVRTAKFVA-REHWIVCGSDDKFIRV 85 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~g~~dg~i~i 85 (312)
.+.+.+|.+.|.+++|+|++ ++|++|+.||.|++||+.+.+....+. .|...|.+++|++ ++.+|++++.|+.|++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 34566788999999999999 899999999999999999877766665 4888999999999 6799999999999999
Q ss_pred EEccCceeeeeecc---cccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEE
Q 047355 86 FDYNTMASVKEFEA---HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 86 wd~~~~~~~~~~~~---h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 162 (312)
||+.+ .....+.. |...|.+++|+|+++++++++.|+.|++||++. .....+.+|...+..+.|+|.+..++++
T Consensus 146 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 146 RDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG--HEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS--CEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC--CEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 99986 44445543 448899999999999999999999999999843 5667788999999999999976559999
Q ss_pred EeCCCeEEEEEcCC----CcceeeecccccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEecccc------
Q 047355 163 ASLDGTIQIWNMDS----SAAKFTLDAHEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEGHT------ 231 (312)
Q Consensus 163 ~s~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~------ 231 (312)
++.|++|++||+++ ......+ +|...+.++.+ ++ ++.+|++++.|+.|++||+++++....+.+|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~--s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYF--NPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEE--CTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEE--cCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 99999999999987 4444444 78889998875 67 88999999999999999998876655555442
Q ss_pred -----------cCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC--ccceEEEEEecCCCeEEEEecCCeEE
Q 047355 232 -----------NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 232 -----------~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
..+..++|+|++++ +|+.|+.|++||+.+++.+.++..+ ...+..++|+|+++.|++|+ ||.|+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~ 376 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNIL 376 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEE
T ss_pred ccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEE
Confidence 23445667777766 7789999999999999998888763 45677779999999999997 89999
Q ss_pred EEecc
Q 047355 299 VKIGN 303 (312)
Q Consensus 299 v~~~~ 303 (312)
||-.+
T Consensus 377 iw~~~ 381 (383)
T 3ei3_B 377 IWNRE 381 (383)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98654
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.4e-42 Score=287.96 Aligned_cols=248 Identities=15% Similarity=0.261 Sum_probs=213.3
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccC--CceeeeEEecCCceeEEEEee--CCcEEEEecCCCeEEEEE
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS--QTTEKSVKVTDSPVRTAKFVA--REHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~i~iwd 87 (312)
.+.+|.+.|++++|+|+|++|++|+.|++|++||+.. .+....+..|..+|.+++|++ ++++|++|+.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4678999999999999999999999999999999874 356678889999999999986 388999999999999999
Q ss_pred ccCce--eeeeecccccceeEEEEecC--CCEEEEEeCCCcEEEEeCCCCce-eeeEecCCccceEEEEeCCCC------
Q 047355 88 YNTMA--SVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIKLWDWEKNWE-CTQTFEGHSHYVMQSAFNPKD------ 156 (312)
Q Consensus 88 ~~~~~--~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~------ 156 (312)
++++. ....+..|...|.+++|+|+ +.+|++++.|+.|++||++.... ....+.+|...+..+.|+|..
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 98763 55667889999999999997 78999999999999999876422 245678899999999999852
Q ss_pred ------CCEEEEEeCCCeEEEEEcCCCc----ceeeecccccceeEEEEEEcCC---ceEEEEEeCCCeEEEEeCCCCe-
Q 047355 157 ------LNTFASASLDGTIQIWNMDSSA----AKFTLDAHEKGINCIDYFITSD---KVYLITGSDDFTVKVWDYETKT- 222 (312)
Q Consensus 157 ------~~~~~s~s~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~---~~~l~sg~~dg~i~vwd~~~~~- 222 (312)
...|++++.|++|++||+++.. ....+.+|...|.+++| +|+ +.+|++|+.|++|++||+++..
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~--sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW--SPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE--CCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE--CCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 4689999999999999998765 45578899999999986 555 4899999999999999987632
Q ss_pred --EEEEe--cccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC
Q 047355 223 --CVQIL--EGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 223 --~~~~~--~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~ 261 (312)
....+ ..|...|.+++|+|++++||+++.|+.|++|+..
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 22334 5688899999999999999999999999999975
No 37
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-42 Score=304.18 Aligned_cols=287 Identities=14% Similarity=0.247 Sum_probs=238.7
Q ss_pred hhh-hcccCcEEEEEEcC-CCCeEEEEecCCeEEEEeccC---Cc---eeeeEEecCCceeEEEEeeCCcEEEEecCCCe
Q 047355 11 KEF-IQKSDRVKSVDFHP-TQPWVLASLYSGTVCIWNYHS---QT---TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF 82 (312)
Q Consensus 11 ~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~ 82 (312)
..+ .+|.+.|.+++|+| ++++|++|+.||+|++||+.. .. ....+ .|..+|.+++|++++++|++|+.||.
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 345 67889999999999 999999999999999999865 32 12222 47889999999999999999999999
Q ss_pred EEEEEcc---Cceeeeeecc------------cccceeEEE--EecCCCEEEEEeCCCcEEEEeCCCCceeeeEecC--C
Q 047355 83 IRVFDYN---TMASVKEFEA------------HEDYIRSLA--VHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG--H 143 (312)
Q Consensus 83 i~iwd~~---~~~~~~~~~~------------h~~~i~~~~--~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~--~ 143 (312)
|++||++ +++....... +...+.++. +++++.++++++.|+.|++||++.. .....+.. |
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~h 213 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL-ERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC-CEEEEEECCGG
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-eeeEEEccCCC
Confidence 9999985 3333332222 445566666 5578899999999999999999765 55666776 8
Q ss_pred ccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeec-ccccceeEEEEEE--cCCceEEEEEeCCCeEEEEeCCC
Q 047355 144 SHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHEKGINCIDYFI--TSDKVYLITGSDDFTVKVWDYET 220 (312)
Q Consensus 144 ~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~l~sg~~dg~i~vwd~~~ 220 (312)
...+..+.|+|. +..+++++.||+|++||+++.+....+. .|...+.++.+.+ ++++.++++|+.||.|++||+++
T Consensus 214 ~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 214 HGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GCCEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 899999999985 6899999999999999999988877765 7777888887643 36788999999999999999999
Q ss_pred CeEEEEecc--------------------------cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeeccc---
Q 047355 221 KTCVQILEG--------------------------HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS--- 271 (312)
Q Consensus 221 ~~~~~~~~~--------------------------h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~--- 271 (312)
++++..+.+ |...|++++|+ ++++|++|+.|+.|++||+.+++....+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 988877764 45568899999 778999999999999999998877666654
Q ss_pred ----------------------------------CccceEEEEEecC--CCeEEEEecCCeEEEEe
Q 047355 272 ----------------------------------GLERVWSIGYKKG--SNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 272 ----------------------------------~~~~v~~~~~~~~--~~~l~~~~~~g~i~v~~ 301 (312)
|...|.+++|.++ +.+|++|+.||+|+||.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 6788999999998 88999999999999983
No 38
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.9e-41 Score=289.34 Aligned_cols=243 Identities=24% Similarity=0.413 Sum_probs=217.2
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCC----ceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEE
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ----TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd 87 (312)
.+..|...|.+++|+|++++|++|+.|+.|++|++... +....+..|...+..+.|.+++. +++++.|++|++||
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd 170 (340)
T 1got_B 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWD 170 (340)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEE
Confidence 35567889999999999999999999999999998764 24456677888999999998765 88999999999999
Q ss_pred ccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCC
Q 047355 88 YNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 88 ~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg 167 (312)
+.+++....+.+|...|.+++|+|+++++++|+.|+.|++||++.. .....+.+|...+..+.|+|. +..|++++.|+
T Consensus 171 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~ 248 (340)
T 1got_B 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-MCRQTFTGHESDINAICFFPN-GNAFATGSDDA 248 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred CCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCC
Confidence 9999999999999999999999999999999999999999998765 556778999999999999994 68999999999
Q ss_pred eEEEEEcCCCcceeeecc--cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcE
Q 047355 168 TIQIWNMDSSAAKFTLDA--HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245 (312)
Q Consensus 168 ~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 245 (312)
+|++||+++.+....+.. +...+.+++ ++|++.++++|+.|+.|++||+.+++.+..+.+|.+.|++++|+|++++
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~--~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVS--FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEE--ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEE--ECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence 999999998876655542 234677776 4789999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEe
Q 047355 246 IITASEDGTILIWN 259 (312)
Q Consensus 246 l~s~s~dg~v~iwd 259 (312)
|++|+.|+.|++||
T Consensus 327 l~s~s~D~~i~iWd 340 (340)
T 1got_B 327 VATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCccEEecC
Confidence 99999999999997
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.8e-42 Score=296.03 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=209.3
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceee----eEEecCCceeEEEEeeCCcEEEEecCCCeEEEEE
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEK----SVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd 87 (312)
...+|.+.|.+++|+|++. +++++.||+|++||+.+++... ....|...|.+++|+|++++|++|+.|+.|++||
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3456788999999999985 5668889999999997765432 2335778999999999999999999999999999
Q ss_pred ccCceeeeeecccccceeEEEEecCCC-EEEEEeCCCcEEEEeCCCCceee-eEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 88 YNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECT-QTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 88 ~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
+.+++.+..+.+|...|++++|+|++. ++++++.|+.|++||++...... ..+..+...+..+.|+|.+..+|++++.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999999999999999999999999875 78899999999999987653322 2334567788999999987789999999
Q ss_pred CCeEEEEEcCCCcceeeecccccceeEEEEEEcCCc-eEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeC-CC
Q 047355 166 DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDK-VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP-EL 243 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~-~~ 243 (312)
|+.|++||+++.+....+.+|...|.+++| ++++ .+|++|+.|++|++||+++++++..+ +|.+.|++++|+| ++
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~--sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~ 324 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAY--SYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDH 324 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEE--CSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSST
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEE--cCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCC
Confidence 999999999999999999999999999885 5554 68999999999999999999887765 6999999999998 78
Q ss_pred cEEEEEeCCCcEEEEeCCCc
Q 047355 244 RIIITASEDGTILIWNATTF 263 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~~~ 263 (312)
++|++++.||+|++|++++.
T Consensus 325 ~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 325 SKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TEEEEEETTSCEEEEECC--
T ss_pred CEEEEEcCCCeEEEEECCCC
Confidence 99999999999999998753
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-42 Score=305.41 Aligned_cols=289 Identities=14% Similarity=0.279 Sum_probs=251.6
Q ss_pred ccCcEEEEEEcCCCC-eEEEE----------ecCCeEEEEeccCCc---eeeeEEecCCceeEEEEeeCCcEEEEecCCC
Q 047355 16 KSDRVKSVDFHPTQP-WVLAS----------LYSGTVCIWNYHSQT---TEKSVKVTDSPVRTAKFVAREHWIVCGSDDK 81 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~-~l~~~----------~~dg~v~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg 81 (312)
+..+|.+++|+|+++ +|+++ +.|+.|++||+.+.. ....+ .+...+.+++|++++++|++|+.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 345789999999987 88888 889999999998764 23333 4677899999999999999999999
Q ss_pred eEEEEEccC----ceeeeeecccccceeEEEEecC-CCEEEEEeCCCcEEEEeCCCCc------ee--eeEecCCccceE
Q 047355 82 FIRVFDYNT----MASVKEFEAHEDYIRSLAVHPT-FPFVLTASDDKLIKLWDWEKNW------EC--TQTFEGHSHYVM 148 (312)
Q Consensus 82 ~i~iwd~~~----~~~~~~~~~h~~~i~~~~~~~~-~~~l~t~s~d~~v~iwd~~~~~------~~--~~~~~~~~~~v~ 148 (312)
.|++||+.+ ......+.+|...|.+++|+|+ +.++++++.|+.|++||+.... .. ......|...+.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 4577888999999999999998 8999999999999999997654 21 123467888999
Q ss_pred EEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeeccc------ccceeEEEEEEcCCc-eEEEEEeCCC---eEEEEeC
Q 047355 149 QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAH------EKGINCIDYFITSDK-VYLITGSDDF---TVKVWDY 218 (312)
Q Consensus 149 ~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-~~l~sg~~dg---~i~vwd~ 218 (312)
.+.|+|.+...+++++.|+.|++||+++.+....+..+ ...+.++.+ ++++ .++++++.|+ .|++||+
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW--HPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE--CSSCTTEEEEEECCSSSCCCCEEET
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEE--CCCCCCEEEEEECCCCCceEEEEeC
Confidence 99999976789999999999999999998888777766 677888875 5665 6899999998 9999999
Q ss_pred CCC-eEEEEec-ccccCeEEEEEeC-CCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCC-CeEEEEecC
Q 047355 219 ETK-TCVQILE-GHTNNVTAVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGS-NQVAFGCDN 294 (312)
Q Consensus 219 ~~~-~~~~~~~-~h~~~i~~l~~~~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~ 294 (312)
+++ .+...+. +|...|++++|+| ++++|++++.|+.|++||+.+++...++..|...|.+++|+|++ +.|++++.|
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 885 6677777 8999999999999 99999999999999999999999999999999999999999999 899999999
Q ss_pred CeEEEEeccCCCC
Q 047355 295 GTLIVKIGNSSGC 307 (312)
Q Consensus 295 g~i~v~~~~~~~~ 307 (312)
|+|+||-.+....
T Consensus 328 ~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 328 NKIEVQTLQNLTN 340 (416)
T ss_dssp SEEEEEESCCCCC
T ss_pred CcEEEEEccCCCC
Confidence 9999998775443
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-43 Score=314.20 Aligned_cols=285 Identities=13% Similarity=0.143 Sum_probs=227.2
Q ss_pred ccCcEEEEEEcCCC---------CeEEEE-------------------ecCCeEEEEeccCCcee----eeEEecCCcee
Q 047355 16 KSDRVKSVDFHPTQ---------PWVLAS-------------------LYSGTVCIWNYHSQTTE----KSVKVTDSPVR 63 (312)
Q Consensus 16 ~~~~i~~~~~~~~~---------~~l~~~-------------------~~dg~v~iw~~~~~~~~----~~~~~~~~~v~ 63 (312)
+.+.|.+++|+|++ ++||+| +.|++|+||++...+.. ..+..+.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 45688888888876 566664 46789999999776542 33556678899
Q ss_pred EEEEeeC------CcEEEEecCCCeEEEEEccCcee-----------eeeecccccceeEEEEecCCCEEEEEeCCCcEE
Q 047355 64 TAKFVAR------EHWIVCGSDDKFIRVFDYNTMAS-----------VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIK 126 (312)
Q Consensus 64 ~~~~~~~------~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~ 126 (312)
.++|+|+ +.+|++|+.||+|++||+.+... ...+.+|...|++++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999986 57999999999999999976532 2367789999999999986 4799999999999
Q ss_pred EEeCCCCceeeeEecCCccceEEE--EeCCCCC-CEEEEEeCCCeEEEEEcCCCcceeeeccccc--ceeEEEEEEcCCc
Q 047355 127 LWDWEKNWECTQTFEGHSHYVMQS--AFNPKDL-NTFASASLDGTIQIWNMDSSAAKFTLDAHEK--GINCIDYFITSDK 201 (312)
Q Consensus 127 iwd~~~~~~~~~~~~~~~~~v~~~--~~~~~~~-~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 201 (312)
+||++....+...+.+|...|.++ .|+| ++ .+|++++.|++|++||+++.+....+.+|.. .+.+++| +|++
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f--sp~~ 367 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY--CPQI 367 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE--ETTT
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEe--CCCc
Confidence 999986544556688999999998 4555 44 7999999999999999998877767777754 3666765 6778
Q ss_pred eEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcc-----------------
Q 047355 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFR----------------- 264 (312)
Q Consensus 202 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~----------------- 264 (312)
..+++++.|++|++||++++.++..+.+|.+.|++|+|+|++++|++|+.|++|++||+....
T Consensus 368 ~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~ 447 (524)
T 2j04_B 368 YSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLW 447 (524)
T ss_dssp TEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEE
T ss_pred CeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEE
Confidence 889999999999999999988888888999999999999999999999999999999853210
Q ss_pred ---------------------------eeeecccCccceEEEEEecCCC---eEEEEecCCeEEEEeccC
Q 047355 265 ---------------------------LQNTLSSGLERVWSIGYKKGSN---QVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 265 ---------------------------~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~g~i~v~~~~~ 304 (312)
...++.+|...|++|+|+|+++ .||+|+.+|+|+||..+-
T Consensus 448 ~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 448 KWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred EeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0112233456789999999964 999999999999998763
No 42
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=300.44 Aligned_cols=280 Identities=19% Similarity=0.328 Sum_probs=231.1
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc-----------eeeeEEecC------------CceeEEEEeeCC
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT-----------TEKSVKVTD------------SPVRTAKFVARE 71 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 71 (312)
.+.+.|.+++|+|++++|++|+.||.|++|++...+ ....+..|. .+|.+++|++++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 357899999999999999999999999999998765 356777787 789999999998
Q ss_pred --cEEEEecCCCeEEEEEccCceee---------------------------------------ee-ecccccceeEEEE
Q 047355 72 --HWIVCGSDDKFIRVFDYNTMASV---------------------------------------KE-FEAHEDYIRSLAV 109 (312)
Q Consensus 72 --~~l~~g~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~h~~~i~~~~~ 109 (312)
..|++++.|+.|++||+.+.... +. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764331 12 3679999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEeCCCCceeee-------EecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc---
Q 047355 110 HPTFPFVLTASDDKLIKLWDWEKNWECTQ-------TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA--- 179 (312)
Q Consensus 110 ~~~~~~l~t~s~d~~v~iwd~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~--- 179 (312)
+|+++++++| .|+.|++||++....... .+.+|...+..+.|+|.+...+++++.||+|++||+++...
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999874433333 35688999999999996558999999999999999998776
Q ss_pred -eeeeccccc------------ceeEEEEEEcCCceEEEEEeCCCeEEEEeCCC-CeEEEEecccccC------------
Q 047355 180 -KFTLDAHEK------------GINCIDYFITSDKVYLITGSDDFTVKVWDYET-KTCVQILEGHTNN------------ 233 (312)
Q Consensus 180 -~~~~~~~~~------------~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~------------ 233 (312)
...+..|.. .+.+++| ++++.+|++++. +.|++||+++ ++++..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKF--SHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEE--CTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred eeeEeccCCCccccccccccCceEEEEEE--CCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 667777765 7888875 778999999999 9999999987 7888888888642
Q ss_pred ---eEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeec--------------------------------ccCccceEE
Q 047355 234 ---VTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL--------------------------------SSGLERVWS 278 (312)
Q Consensus 234 ---i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~--------------------------------~~~~~~v~~ 278 (312)
+..++|+|++++|++|+.||.|++||+.+++..... ......+..
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 334999999999999999999999999887654210 012346889
Q ss_pred EEEecCCCeEEEEecCCeEE
Q 047355 279 IGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 279 ~~~~~~~~~l~~~~~~g~i~ 298 (312)
++|+|+++.||+++.++...
T Consensus 422 ~~~~p~~~~la~~~~~~~~~ 441 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNNLYI 441 (447)
T ss_dssp EEECSSSSEEEEECSSCEEE
T ss_pred EEECCCCCEEEEEecceeee
Confidence 99999999999999988443
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.8e-42 Score=303.22 Aligned_cols=288 Identities=18% Similarity=0.227 Sum_probs=233.1
Q ss_pred hhhcccCcEEEEEEcCC-CCeEEEEecCCeEEEEeccCCceee--eEEecCCceeEEEEee-CCcEEEEecCCCeEEEEE
Q 047355 12 EFIQKSDRVKSVDFHPT-QPWVLASLYSGTVCIWNYHSQTTEK--SVKVTDSPVRTAKFVA-REHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~iw~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd 87 (312)
....|..+|++|+|||+ +.+||+|+.||+|+|||+...+... .+..|..+|.+++|+| ++.+|++|+.||+|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 34467789999999995 5689999999999999997665433 3456889999999997 688999999999999999
Q ss_pred ccCceeeeeec--ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 88 YNTMASVKEFE--AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 88 ~~~~~~~~~~~--~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
+++........ .+...+.+++++|++.+|++|+.||.|++||++. .....+.+|...|..+.|+|.+..++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 98764433333 3345678999999999999999999999999864 3456678999999999999987779999999
Q ss_pred CCeEEEEEcCCCccee---eecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccccc------CeEE
Q 047355 166 DGTIQIWNMDSSAAKF---TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTN------NVTA 236 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~------~i~~ 236 (312)
|++|++||+++..... ...+|...|.+++| ++++.+|++|+.||.|++||++++.....+..|.. .+..
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~--spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACF--SPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCB--CTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cceeeEEecccccccceEEEeeeccccccceeE--CCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 9999999998765433 33578889998874 78999999999999999999998887777666543 2335
Q ss_pred EEEeCCCcEEEEEe------------CCCcEEEEeCCCcceeeecc-cCccceEEE-EEecCCCeEEEEecCCeEEEEec
Q 047355 237 VCFHPELRIIITAS------------EDGTILIWNATTFRLQNTLS-SGLERVWSI-GYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 237 l~~~~~~~~l~s~s------------~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~-~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
..|+|++..+++++ .++.|++||..+++....+. .|...|.++ +|+|+|+.|++|+ |++|+||-.
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 57788777777765 24679999999998877764 566778887 6999999999876 778888876
Q ss_pred cC
Q 047355 303 NS 304 (312)
Q Consensus 303 ~~ 304 (312)
+.
T Consensus 429 ~~ 430 (435)
T 4e54_B 429 QE 430 (435)
T ss_dssp C-
T ss_pred Cc
Confidence 53
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.9e-41 Score=297.91 Aligned_cols=282 Identities=18% Similarity=0.232 Sum_probs=239.8
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 98 (312)
.+.+++|+|++++|++++.||.|++||+.+.+....+..+ ..+....|.+++++|++|+.||.|++||+.+......+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 3457899999999999999999999999876555444444 344455678899999999999999999999988888888
Q ss_pred ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCc
Q 047355 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178 (312)
Q Consensus 99 ~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~ 178 (312)
+|...|.+++|+|++++|++++.|+.|++||+... .....+.+|...+..+.|+|. +..+++++.|++|++||+++.+
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-SNPRTLIGHRATVTDIAIIDR-GRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CCCEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-cCceEEcCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEeECCCCc
Confidence 99999999999999999999999999999999765 456678899999999999984 6899999999999999999988
Q ss_pred ceeeecc---cccceeEEEEEE-------------------cCCceEEEEEeCCCeEEEEeCCCCeEEEEe-cccccCeE
Q 047355 179 AKFTLDA---HEKGINCIDYFI-------------------TSDKVYLITGSDDFTVKVWDYETKTCVQIL-EGHTNNVT 235 (312)
Q Consensus 179 ~~~~~~~---~~~~v~~~~~~~-------------------~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~i~ 235 (312)
....+.. +...+.++.+.+ ++++.++++|+.||.|++||+++++....+ ..|...|+
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 8877764 445666666532 478899999999999999999988776655 45889999
Q ss_pred EEEEeCCCc-EEEEEeCCCcEEEEeCCCcce-eeeccc-CccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 236 AVCFHPELR-IIITASEDGTILIWNATTFRL-QNTLSS-GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 236 ~l~~~~~~~-~l~s~s~dg~v~iwd~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
+++|+|+++ +|++|+.||.|++||+.+.+. ...+.. +...+.++ +.++++.|++++.||++++|-...
T Consensus 295 ~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 295 SLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECC
T ss_pred eEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccC
Confidence 999999998 999999999999999988643 566666 45567777 556889999999999999998654
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-43 Score=303.35 Aligned_cols=281 Identities=9% Similarity=0.086 Sum_probs=228.2
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCC--ceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ--TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA 92 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 92 (312)
.+.++|++++|+|++++|++|+.|+.|++||+.+. +....+..|..+|.+++|++++++|++|+.|+.|++||+.+..
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 35678999999999999999999999999999877 6677788899999999999999999999999999999998876
Q ss_pred ---eeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce--eeeEecC-CccceEEEEeCCCCCCEEEEEeCC
Q 047355 93 ---SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE--CTQTFEG-HSHYVMQSAFNPKDLNTFASASLD 166 (312)
Q Consensus 93 ---~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~d 166 (312)
....+..|...|.+++|+|++++|++++.|+.|++||++.... ....+.. |...+..+.|+| ++.++++++.|
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d 167 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAGCAD 167 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEEEESS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEEEeCC
Confidence 5667788999999999999999999999999999999876532 3556666 999999999998 45899999999
Q ss_pred CeEEEEEcCC------------------CcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeE----E
Q 047355 167 GTIQIWNMDS------------------SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC----V 224 (312)
Q Consensus 167 g~v~iwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~----~ 224 (312)
++|++||++. .+....+ .|...+.++++ ++++.+|++|+.|+.|++||+++++. +
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~--sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF--SPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE--CTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE--CCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 9999999853 2334445 78888998875 78899999999999999999998876 7
Q ss_pred EEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC-c-ceeee----------------------------------
Q 047355 225 QILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT-F-RLQNT---------------------------------- 268 (312)
Q Consensus 225 ~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~-~-~~~~~---------------------------------- 268 (312)
..+.+|...|++++|+|++++|++|+.|+.+ +|+... + +....
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRST 323 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccccc
Confidence 7788999999999999999999999877666 665541 1 00000
Q ss_pred ----------------cccCccceEEEEEecCC-C---eEEEEecCCeEEEE
Q 047355 269 ----------------LSSGLERVWSIGYKKGS-N---QVAFGCDNGTLIVK 300 (312)
Q Consensus 269 ----------------~~~~~~~v~~~~~~~~~-~---~l~~~~~~g~i~v~ 300 (312)
...|...|.++++.++. . .|++|+.||+|+||
T Consensus 324 ~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iW 375 (377)
T 3dwl_C 324 FRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLW 375 (377)
T ss_dssp -------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred ccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEe
Confidence 01277789999976644 3 59999999999998
No 46
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.2e-41 Score=287.03 Aligned_cols=274 Identities=15% Similarity=0.158 Sum_probs=237.9
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc---eeeeEEecCCceeEEEEeeCCc-EEEEecCCCeEEEEEc
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT---TEKSVKVTDSPVRTAKFVAREH-WIVCGSDDKFIRVFDY 88 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~ 88 (312)
..+|.+.|.+++|+|++++|++++.||.|++|++...+ ....+..+...+.+++|+++++ +|++|+.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 34789999999999999999999999999999998766 2445567888999999999999 9999999999999999
Q ss_pred -cCceeeeeecc--cccceeEEEEecCCCEEEEEeCCCcEEEEeCCCC--------ceeeeEecCCccceEEEEeCCCCC
Q 047355 89 -NTMASVKEFEA--HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN--------WECTQTFEGHSHYVMQSAFNPKDL 157 (312)
Q Consensus 89 -~~~~~~~~~~~--h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~ 157 (312)
.+... ..+.. |...|.+++|+| +.++++++.|+.|++||++.. ..+...+. |...+..+.|+|..
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 77644 67788 999999999999 999999999999999997640 23333444 77889999998742
Q ss_pred CEEEEEeCCCeEEEEEcCC-Cc--ceeeecccccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCC------eEEEEe
Q 047355 158 NTFASASLDGTIQIWNMDS-SA--AKFTLDAHEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETK------TCVQIL 227 (312)
Q Consensus 158 ~~~~s~s~dg~v~iwd~~~-~~--~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~------~~~~~~ 227 (312)
+++++.|+.|++||+++ .. .......|...+.++.+ ++ ++.++++|+.||.|++|+++.. +....+
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~--~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL--LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE--CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE--CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 99999999999999988 44 33344567778888875 67 7899999999999999999876 667777
Q ss_pred ccccc---------CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC-ccceEEEEEecCCCeEEEEecCCe
Q 047355 228 EGHTN---------NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG-LERVWSIGYKKGSNQVAFGCDNGT 296 (312)
Q Consensus 228 ~~h~~---------~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~g~ 296 (312)
..|.. .|++++|+|++++|++++.||.|++||+.+++.+.++..+ ...|.+++ |+++.|++++.||+
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 77765 9999999999999999999999999999999999999998 89999999 99999999999998
No 47
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.4e-42 Score=289.43 Aligned_cols=250 Identities=15% Similarity=0.246 Sum_probs=206.0
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc--eeeeEEecCCceeEEEEee--CCcEEEEecCCCeEEE
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT--TEKSVKVTDSPVRTAKFVA--REHWIVCGSDDKFIRV 85 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~i~i 85 (312)
...+.+|.+.|++++|+|++++|++|+.|++|++||+.... ....+..|..+|.+++|++ ++++|++|+.|++|++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 34567899999999999999999999999999999997654 3567788999999999975 4889999999999999
Q ss_pred EEccCc--eeeeeecccccceeEEEEecC--CCEEEEEeCCCcEEEEeCCCCc--eeeeEecCCccceEEEEeCCCC---
Q 047355 86 FDYNTM--ASVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIKLWDWEKNW--ECTQTFEGHSHYVMQSAFNPKD--- 156 (312)
Q Consensus 86 wd~~~~--~~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~--- 156 (312)
||++++ .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++... .....+.+|...+..+.|+|..
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 999876 355677899999999999998 7899999999999999987542 2234567788888888998852
Q ss_pred -------------CCEEEEEeCCCeEEEEEcCCC---cceeeecccccceeEEEEEEcCCc----eEEEEEeCCCeEEEE
Q 047355 157 -------------LNTFASASLDGTIQIWNMDSS---AAKFTLDAHEKGINCIDYFITSDK----VYLITGSDDFTVKVW 216 (312)
Q Consensus 157 -------------~~~~~s~s~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~----~~l~sg~~dg~i~vw 216 (312)
...|++++.|++|++||++.. .....+.+|...|.+++| +|++ .+|++|+.|++|++|
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~--sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW--APSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC--CCCSSCSCCEEEEEETTCEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe--cCCCCCCCceEEEEcCCCeEEEE
Confidence 358999999999999999754 355678899999999986 4554 789999999999999
Q ss_pred eCCCC---e-EEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC
Q 047355 217 DYETK---T-CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 217 d~~~~---~-~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~ 261 (312)
++++. . ....+..|...|++++|+|++++||+++.|+.|++|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 98752 1 223456788999999999999999999999999999975
No 48
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-40 Score=280.44 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=223.2
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
.+.+.+|...|.+++|+|++++|++++.||.|++||+.+.+....+..|...+.++.|++++++|++|+.|+.|++||++
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 34566788999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred CceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 90 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
+.+....+..|..+|.+++|+|+++++++++.|+.|++||++...........+...+..+.|+|. +..+++++.|+.|
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i 216 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTL 216 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT-SSEEEEEETTTEE
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC-CCEEEEEcCCCeE
Confidence 999999999999999999999999999999999999999998764433334556677888999984 5899999999999
Q ss_pred EEEEcCCCcceeeecccccceeEEEEE-EcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEE
Q 047355 170 QIWNMDSSAAKFTLDAHEKGINCIDYF-ITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIIT 248 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s 248 (312)
++||+++.+....+.+|.....++... ..+++.++++|+.||.|++||+++++.+..+.+|.+.|.+++|+|+++++++
T Consensus 217 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp EEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 999999998888888887654433222 2457889999999999999999999999999999999999999999999999
Q ss_pred Ee--CCCcEEEEeCC
Q 047355 249 AS--EDGTILIWNAT 261 (312)
Q Consensus 249 ~s--~dg~v~iwd~~ 261 (312)
++ .|++|++|+..
T Consensus 297 ~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 297 AALENDKTIKLWKSD 311 (312)
T ss_dssp EECTTTCCEEEEECC
T ss_pred EEccCCccEEEecCC
Confidence 97 69999999863
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-40 Score=280.12 Aligned_cols=250 Identities=20% Similarity=0.328 Sum_probs=211.0
Q ss_pred eEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC--ceeeeeecccccceeEEEEec--CCCEEEEEeCCCcEEEEe
Q 047355 54 SVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT--MASVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLWD 129 (312)
Q Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~~~h~~~i~~~~~~~--~~~~l~t~s~d~~v~iwd 129 (312)
.+..|...|.+++|++++++|++|+.|++|++||+.+ .+.+..+.+|.++|.+++|+| ++++|++|+.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4556888999999999999999999999999999974 356788999999999999975 378999999999999999
Q ss_pred CCCCc-eeeeEecCCccceEEEEeCCCC-CCEEEEEeCCCeEEEEEcCCCc--ceeeecccccceeEEEEEEcC------
Q 047355 130 WEKNW-ECTQTFEGHSHYVMQSAFNPKD-LNTFASASLDGTIQIWNMDSSA--AKFTLDAHEKGINCIDYFITS------ 199 (312)
Q Consensus 130 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~s~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~------ 199 (312)
++... .....+.+|...+..+.|+|.. +.++++++.|++|++||+++.. ....+.+|...+.++.|.+..
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 87642 3455678899999999999853 5799999999999999998753 245677899999998874321
Q ss_pred -----CceEEEEEeCCCeEEEEeCCCCe----EEEEecccccCeEEEEEeCCC---cEEEEEeCCCcEEEEeCCCcc---
Q 047355 200 -----DKVYLITGSDDFTVKVWDYETKT----CVQILEGHTNNVTAVCFHPEL---RIIITASEDGTILIWNATTFR--- 264 (312)
Q Consensus 200 -----~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~i~~l~~~~~~---~~l~s~s~dg~v~iwd~~~~~--- 264 (312)
++.+|++|+.|+.|++||+++++ ....+.+|...|++++|+|++ ++||+++.|++|++||+.+..
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~ 243 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPW 243 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcc
Confidence 25689999999999999987654 667889999999999999984 899999999999999987642
Q ss_pred eeeec--ccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 265 LQNTL--SSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 265 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
....+ ..+...|++++|+|+++.|++++.||+|+||-.+
T Consensus 244 ~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 11222 4566789999999999999999999999999765
No 50
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.9e-40 Score=284.66 Aligned_cols=254 Identities=19% Similarity=0.252 Sum_probs=227.9
Q ss_pred ceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEe
Q 047355 50 TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWD 129 (312)
Q Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd 129 (312)
+....+..|..+|.+++|++++++|++|+.||+|++||..+......+..|...|.+++|+|++.++++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 45667889999999999999999999999999999999999888888889999999999999999999999999999999
Q ss_pred CCCC-----ceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEE
Q 047355 130 WEKN-----WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYL 204 (312)
Q Consensus 130 ~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 204 (312)
+... ......+.+|...+..+.|+|. ...+++++.|++|++||+++++....+.+|...+.++++.+++++.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 7532 1234567789999999999985 578999999999999999999999999999999999988766678899
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC--ccceEEEEEe
Q 047355 205 ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG--LERVWSIGYK 282 (312)
Q Consensus 205 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~ 282 (312)
++|+.||.|++||+++++++..+.+|...|++++|+|++.+|++|+.|++|++||+.+.+....+..+ ...+.+++|+
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999887665544432 3468999999
Q ss_pred cCCCeEEEEecCCeEEEEeccC
Q 047355 283 KGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 283 ~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
|+++.|++|+.||+|+||-...
T Consensus 294 ~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 294 LSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp TTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEECCCcEEEEECCC
Confidence 9999999999999999997543
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1e-39 Score=287.54 Aligned_cols=278 Identities=17% Similarity=0.314 Sum_probs=240.0
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe--cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
.++.|+|++++ .|++ +.|++|+|||..+++....+.. +...|.+++|++++++|++|+.||.|++||+++++.+..
T Consensus 107 y~~~l~wS~~n-~lAv-gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTTS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCCC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 35679999754 5555 4599999999999887776664 556799999999999999999999999999999999999
Q ss_pred ecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCC
Q 047355 97 FEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176 (312)
Q Consensus 97 ~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~ 176 (312)
+.+|...+.+++++ +.++++|+.|+.+++||..........+.+|...+..+.+.|. +..+++++.|+.+++||..+
T Consensus 185 ~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~-g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 185 MTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEESSC
T ss_pred EeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCC-CCeeeeeeccccceEEeecc
Confidence 99999999988875 5789999999999999998776777888999999999999985 58999999999999999987
Q ss_pred Ccc----eeeecccccceeEEEEEEcCCceEEEE--EeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEe
Q 047355 177 SAA----KFTLDAHEKGINCIDYFITSDKVYLIT--GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 177 ~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s--g~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
.+. ......|...|.++.+.+. +..++++ |+.|+.|++||+.++++...+..| ..+.++.|+|+++.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~-~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPW-QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTT-CTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCC-cccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEE
Confidence 643 3456778888998886433 3344544 458999999999999999888754 5689999999999888765
Q ss_pred --CCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 251 --EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 251 --~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
.|+.|+|||+.+++.+.++.+|...|++++|+|||+.|++|+.||+|+||--.
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 78999999999999999999999999999999999999999999999999654
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.8e-42 Score=298.02 Aligned_cols=265 Identities=19% Similarity=0.291 Sum_probs=231.2
Q ss_pred CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEE
Q 047355 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117 (312)
Q Consensus 38 dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 117 (312)
+..+..|+.......+.+..|..+|.+++|+|++++|++|+.||+|++||+.+.+....+..|...|.+++|+|++++++
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred cccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 34455677766677788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEeCCCCc------eeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeee-----ccc
Q 047355 118 TASDDKLIKLWDWEKNW------ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-----DAH 186 (312)
Q Consensus 118 t~s~d~~v~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~-----~~~ 186 (312)
+|+.|+.+++||+.... .....+.+|...+..+.|.|.+...+++++.|++|++||+++++....+ .+|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 99999999999986421 2334578899999999999977778999999999999999998877665 578
Q ss_pred ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCC-CCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcce
Q 047355 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYE-TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265 (312)
Q Consensus 187 ~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~ 265 (312)
...+.++.+. ..++.++++|+.|+.|++||++ ..+.+..+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.
T Consensus 205 ~~~v~~~~~~-~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 205 TADVLSLSIN-SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp CSCEEEEEEC-SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE
T ss_pred ccCeEEEEee-cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE
Confidence 8888888753 4478899999999999999997 4577888999999999999999999999999999999999999877
Q ss_pred eeecccCc-------cceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 266 QNTLSSGL-------ERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 266 ~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
...+..+. ..|.+++|+|+|+.|++|+.||.|+||-..
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 66554432 348899999999999999999999999654
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-40 Score=290.69 Aligned_cols=279 Identities=19% Similarity=0.291 Sum_probs=243.5
Q ss_pred EEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe-cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec
Q 047355 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 20 i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 98 (312)
+.+++|++ ..+++++.||.|++||+.+++....+.. +...|.+++|++++++|++|+.||.|++||+.+.+.+..+.
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 44466664 5689999999999999998887777665 67889999999999999999999999999999999999999
Q ss_pred ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCc
Q 047355 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178 (312)
Q Consensus 99 ~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~ 178 (312)
+|...|.+++|+ +.++++++.||.|++||++........+.+|...+..+.|+| ++..+++++.|+.|++||+++..
T Consensus 174 ~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 174 GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSS
T ss_pred CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCC
Confidence 999999999995 568999999999999999866566778889999999999999 56899999999999999999998
Q ss_pred ceeeecccccceeEEEEEEcCC-ceEEEEEe--CCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEE--eCCC
Q 047355 179 AKFTLDAHEKGINCIDYFITSD-KVYLITGS--DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA--SEDG 253 (312)
Q Consensus 179 ~~~~~~~~~~~v~~~~~~~~~~-~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~--s~dg 253 (312)
....+..|...+.++++ +++ ..++++|+ .|+.|++||+.+++++..+. |...|++++|+|++++++++ +.||
T Consensus 251 ~~~~~~~~~~~v~~~~~--~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 251 PKFTKTNHNAAVKAVAW--CPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp EEEEECCCSSCCCEEEE--CTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred ccEEecCCcceEEEEEE--CCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCC
Confidence 88889999999999986 443 35666765 79999999999999988886 67789999999999999995 4899
Q ss_pred cEEEEeCCCccee--eecccCccceEEEEEecCCCeEEEEecCCeEEEEeccCCC
Q 047355 254 TILIWNATTFRLQ--NTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSG 306 (312)
Q Consensus 254 ~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~~ 306 (312)
.|++||+.+.+.. ..+..|...|.+++|+|+++.|++++.||+|++|-.....
T Consensus 328 ~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 328 NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999999885544 3466888999999999999999999999999999766443
No 54
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.9e-40 Score=292.28 Aligned_cols=273 Identities=26% Similarity=0.461 Sum_probs=243.2
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceee
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASV 94 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 94 (312)
+|...|.+++| +++++++|+.||.|++||+.+.+....+..|..+|.++.| +++.|++|+.||.|++||+.+++..
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 34567888877 7899999999999999999999988899999999999988 7889999999999999999999999
Q ss_pred eeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee--eeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEE
Q 047355 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC--TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172 (312)
Q Consensus 95 ~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iw 172 (312)
..+.+|...|.++++++ .++++|+.||.|++||+...... ...+.+|...+..+.+ ++..+++++.||+|++|
T Consensus 207 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEE
T ss_pred EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEE
Confidence 99999999999999974 58999999999999998765332 2567889999999998 34799999999999999
Q ss_pred EcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCC
Q 047355 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252 (312)
Q Consensus 173 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d 252 (312)
|+++.+....+.+|...+.++.+ ++.++++|+.||.|++||+++++++..+.+|...|++++| ++.+|++|+.|
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred ECCcCcEEEEEcCCCCcEEEEEe----CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 99999999999999999998875 3578999999999999999999999999999999999999 67899999999
Q ss_pred CcEEEEeCCCcc---------eeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 253 GTILIWNATTFR---------LQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 253 g~v~iwd~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
|.|++||+.+.+ ....+..|...|.+++| +++.|++++.||+|++|-...
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 999999987665 67788889999999999 889999999999999996553
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-39 Score=289.75 Aligned_cols=282 Identities=20% Similarity=0.341 Sum_probs=245.3
Q ss_pred hhhcccCc-EEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 12 EFIQKSDR-VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 12 ~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
.+.+|.+. +.++.| ++++|++|+.||+|++||+.+.+....+..|..+|.+++|.+++ .+++|+.||+|++||+++
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 45677776 466666 56799999999999999999999999999999999999999877 899999999999999999
Q ss_pred ceeeeeecccccceeEEEEe--cCCCEEEEEeCCCcEEEEeCCCCcee----------------------eeEecCCccc
Q 047355 91 MASVKEFEAHEDYIRSLAVH--PTFPFVLTASDDKLIKLWDWEKNWEC----------------------TQTFEGHSHY 146 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~--~~~~~l~t~s~d~~v~iwd~~~~~~~----------------------~~~~~~~~~~ 146 (312)
++....+.+|...|.+++++ ++++++++++.|+.+++||+...... ...+.+|...
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 99999999999999999998 56789999999999999998754321 3456778888
Q ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEE
Q 047355 147 VMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI 226 (312)
Q Consensus 147 v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 226 (312)
+..+.. ++..+++++.|+.|++||+++.+....+.+|...+.++.+ ++++.++++|+.||.|++||+++++++..
T Consensus 273 v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 273 VRTVSG---HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIY--DHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp EEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEE--cCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 877643 3579999999999999999999999999999999998875 67888999999999999999999999999
Q ss_pred ecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccCC
Q 047355 227 LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 227 ~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
+.+|...|.+++|++ ++|++++.||.|++||+.+.+...... +...+..++|+|+++.|++++ +|.++||-.++.
T Consensus 348 ~~~h~~~v~~~~~~~--~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 348 LQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp ECCCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred EeCCCCcEEEEEEcC--CEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 999999999999984 789999999999999999876554442 455677889999999999998 899999976643
No 56
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=282.88 Aligned_cols=251 Identities=22% Similarity=0.408 Sum_probs=209.0
Q ss_pred hcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc--eeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 14 IQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT--TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
.+|.+.|.+++|+|++++|++|+.|++|++|++.... ....+..|..+|.+++|+|++++|++|+.|++|++||+.+.
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 4788999999999999999999999999999987653 45677788999999999999999999999999999999765
Q ss_pred ---eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc-eeeeEecCCccceEEEEeCCCCCCEEEEEeCCC
Q 047355 92 ---ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW-ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 92 ---~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg 167 (312)
.....+..|...|.+++|+|++++|++++.|+.|++||..... .+...+.+|...|..+.|+| ++.+|++++.|+
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~ 216 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCC
Confidence 3456778999999999999999999999999999999986543 34567889999999999998 468999999999
Q ss_pred eEEEEEcCCCc---------------ceeeecc-cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe---------
Q 047355 168 TIQIWNMDSSA---------------AKFTLDA-HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT--------- 222 (312)
Q Consensus 168 ~v~iwd~~~~~---------------~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--------- 222 (312)
+|++||..... ....+.+ |...+.++++ ++++..+++++.|+.|++|+.....
T Consensus 217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~ 294 (345)
T 3fm0_A 217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW--CQLTGALATACGDDAIRVFQEDPNSDPQQPTFSL 294 (345)
T ss_dssp CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEE--CTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEE
T ss_pred eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEE--ecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEE
Confidence 99999974321 1222333 7778888875 6788899999999999999976432
Q ss_pred EEEEecccccCeEEEEEeCCC-cEEEEEeCCCcEEEEeCCCcceee
Q 047355 223 CVQILEGHTNNVTAVCFHPEL-RIIITASEDGTILIWNATTFRLQN 267 (312)
Q Consensus 223 ~~~~~~~h~~~i~~l~~~~~~-~~l~s~s~dg~v~iwd~~~~~~~~ 267 (312)
......+|...|++++|+|++ .+||+|+.||+|++|++.+.+...
T Consensus 295 ~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 295 TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp EEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred EeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 123446899999999999987 499999999999999998766543
No 57
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=271.59 Aligned_cols=278 Identities=15% Similarity=0.295 Sum_probs=235.1
Q ss_pred EEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe--cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 20 i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
.+.|+|++++ .|+ .+.|++|+|||+++++..+.+.. |...|.+++|++++++|++|+.||+|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~-~lA-vg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEE-EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEE-EEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999886 555 55699999999999888877764 5567999999999999999999999999999999999999
Q ss_pred cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047355 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177 (312)
Q Consensus 98 ~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~ 177 (312)
.+|...+.++.. .+.++++++.++.+++|+..........+.+|...+..+.+.+. +..+++++.|++|++||+++.
T Consensus 106 ~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 106 TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEESSCB
T ss_pred cCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC-CCEEEEEecCcceeEEECCCC
Confidence 999998887665 45789999999999999988777777888899999999999884 589999999999999999876
Q ss_pred cce----eeecccccceeEEEEEEcCCc-eEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEe--
Q 047355 178 AAK----FTLDAHEKGINCIDYFITSDK-VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS-- 250 (312)
Q Consensus 178 ~~~----~~~~~~~~~v~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s-- 250 (312)
+.. .....+...+.++.+.+.... ..+++++.++.|++||.+......... |...+..+.|+|+++.+++++
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECT
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEc
Confidence 533 334556677777765432222 234577889999999998887766554 677899999999998887665
Q ss_pred CCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 251 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
.|+.|++||+.+++.+.++.+|...|.+++|+|++++|++|+.||+|+||--.
T Consensus 262 ~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 262 AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 79999999999999999999999999999999999999999999999999543
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-40 Score=281.39 Aligned_cols=244 Identities=17% Similarity=0.372 Sum_probs=199.1
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccC-------CceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEc
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-------QTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDY 88 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 88 (312)
|.+.|.+++|+|++++|++|+.|++|++|++.. .+....+..|...|.+++|+|++++|++|+.|++|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 889999999999999999999999999999853 2345567788899999999999999999999999999999
Q ss_pred cC----ceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCC-ceeeeEecCCccceEEEEeCCCC-CCEEEE
Q 047355 89 NT----MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKN-WECTQTFEGHSHYVMQSAFNPKD-LNTFAS 162 (312)
Q Consensus 89 ~~----~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~~~~s 162 (312)
.. .+.+..+.+|...|.+++|+|++.+|++++.|++|++||.... ..+...+.+|...|..+.|+|.. ...+++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 43 2456778999999999999999999999999999999997653 24567889999999999999863 457999
Q ss_pred EeCCCeEEEEEcCCC--------cceeeecc-cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe--EE-EEeccc
Q 047355 163 ASLDGTIQIWNMDSS--------AAKFTLDA-HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT--CV-QILEGH 230 (312)
Q Consensus 163 ~s~dg~v~iwd~~~~--------~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~-~~~~~h 230 (312)
++.|++|++||++.. .....+.. |...|.+++| ++++ ++++++.||.|++||..+++ .. ..+.+|
T Consensus 217 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 217 GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW--GFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEE--CTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEE--cCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc
Confidence 999999999998754 22333444 8888999886 3444 79999999999999988764 23 234678
Q ss_pred cc-CeEEEEEeC--CCcEEEEEeCCCcEEEEeCCC
Q 047355 231 TN-NVTAVCFHP--ELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 231 ~~-~i~~l~~~~--~~~~l~s~s~dg~v~iwd~~~ 262 (312)
.. .|++++|+| ++++|++|+.||+|++||+++
T Consensus 294 ~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 87 899999999 688999999999999999864
No 59
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=280.79 Aligned_cols=282 Identities=15% Similarity=0.254 Sum_probs=234.8
Q ss_pred hhhhhhcccCcEEEEEEcCC---CCeEEEEecCCeEEEEeccC-Ccee-eeEEecCCceeEEEEeeCCcEEEEecCCCeE
Q 047355 9 IEKEFIQKSDRVKSVDFHPT---QPWVLASLYSGTVCIWNYHS-QTTE-KSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83 (312)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~v~iw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i 83 (312)
..+.+.+|.+.|.+++|+|+ +++|++|+.||.|++||++. .... ..+..|..+|.+++|++++++|++|+.||.|
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTA 110 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcE
Confidence 34567789999999999999 59999999999999999986 4444 6778899999999999999999999999999
Q ss_pred EEEEccCceeeeeecccccceeEEEE--ecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEE
Q 047355 84 RVFDYNTMASVKEFEAHEDYIRSLAV--HPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFA 161 (312)
Q Consensus 84 ~iwd~~~~~~~~~~~~h~~~i~~~~~--~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 161 (312)
++||+++.+... +..|...|.+++| +|++.++++++.|+.|++||++.. .....+..+. .+..+.+.+ ..++
T Consensus 111 ~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~-~~~~~~~~~---~~~~ 184 (368)
T 3mmy_A 111 KMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS-NPMMVLQLPE-RCYCADVIY---PMAV 184 (368)
T ss_dssp EEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS-SCSEEEECSS-CEEEEEEET---TEEE
T ss_pred EEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC-cEEEEEecCC-CceEEEecC---CeeE
Confidence 999999887654 5679999999999 889999999999999999998765 4445555554 445555543 4788
Q ss_pred EEeCCCeEEEEEcCCCcceeee--cccccceeEEEEEEcCC--ceEEEEEeCCCeEEEEeCCCC---eEEEEeccccc--
Q 047355 162 SASLDGTIQIWNMDSSAAKFTL--DAHEKGINCIDYFITSD--KVYLITGSDDFTVKVWDYETK---TCVQILEGHTN-- 232 (312)
Q Consensus 162 s~s~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~--~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~-- 232 (312)
+++.++.+++|+++........ ..+.....++.+..... ...+++|+.||.|++||++.. .....+.+|..
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 8999999999999876544332 22334455655544432 234999999999999999876 45666777776
Q ss_pred ----------CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCe
Q 047355 233 ----------NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT 296 (312)
Q Consensus 233 ----------~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~ 296 (312)
+|++++|+|++++|++|+.||.|++||+.+++....+..|...+.+++|+|+++.|++++.|+.
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccc
Confidence 7999999999999999999999999999999999999999999999999999999999999874
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.4e-40 Score=288.67 Aligned_cols=281 Identities=15% Similarity=0.158 Sum_probs=234.3
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
..+....|+|++++|++|+.||.|++||+...+....+..|...|.+++|++++++|++|+.|+.|++||+.+.+....+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 44555578999999999999999999999988777777788999999999999999999999999999999999988999
Q ss_pred cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecC---CccceEEE---------------------EeC
Q 047355 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG---HSHYVMQS---------------------AFN 153 (312)
Q Consensus 98 ~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~---~~~~v~~~---------------------~~~ 153 (312)
.+|...|.+++|+|+++++++++.|+.|++||++.. .....+.. +...+..+ .|+
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG-TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC-ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 999999999999999999999999999999998865 44445543 33344444 455
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCcceeeec-ccccceeEEEEEEcCCce-EEEEEeCCCeEEEEeCCCCe-EEEEecc-
Q 047355 154 PKDLNTFASASLDGTIQIWNMDSSAAKFTLD-AHEKGINCIDYFITSDKV-YLITGSDDFTVKVWDYETKT-CVQILEG- 229 (312)
Q Consensus 154 ~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~-~~~~~~~- 229 (312)
| ++..+++++.||.|++||+++.+....+. .|...+.++.+ ++++. ++++|+.||.|++||+++++ ++..+..
T Consensus 257 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 257 T-YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV--DGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp C-TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE--CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES
T ss_pred C-CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE--eCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc
Confidence 6 45799999999999999999887766654 47788898875 67777 99999999999999998864 3566665
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCc---------ceeeecccCccceEEEEEecCCC---eEEEEecCCeE
Q 047355 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTF---------RLQNTLSSGLERVWSIGYKKGSN---QVAFGCDNGTL 297 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~g~i 297 (312)
|...|+++.+ +++++|++++.|+.|++|++... .....+..+...+.+++|+|+++ .|++++.+|.+
T Consensus 334 ~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~ 412 (420)
T 3vl1_A 334 EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFC 412 (420)
T ss_dssp TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEE
T ss_pred CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceE
Confidence 6778888855 57789999999999999998763 22234556678899999999999 78888889999
Q ss_pred EEEecc
Q 047355 298 IVKIGN 303 (312)
Q Consensus 298 ~v~~~~ 303 (312)
.+|-.+
T Consensus 413 ~~~~~~ 418 (420)
T 3vl1_A 413 ALYNLS 418 (420)
T ss_dssp EEEESC
T ss_pred EEEecc
Confidence 888654
No 61
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-39 Score=284.24 Aligned_cols=239 Identities=23% Similarity=0.441 Sum_probs=210.6
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 98 (312)
.|.+++|+|++++|++|+.|++|++||+.+.+....+..|...|.+++|++++++|++|+.|++|++||+.+++....+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 59999999999999999999999999999988888889999999999999999999999999999999999988766664
Q ss_pred ccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeeeEe-------cCCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 99 AHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNWECTQTF-------EGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 99 ~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
+...+.+++++| ++.++++|+.|+.|++||.+... ....+ .+|...+..+.|+|. +..+++++.|++|+
T Consensus 205 -~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~-g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 205 -IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRD-GQSVVSGSLDRSVK 281 (393)
T ss_dssp -CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred -cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCC-CCEEEEEeCCCEEE
Confidence 556799999999 88999999999999999987653 23333 578899999999984 58999999999999
Q ss_pred EEEcCCC------------cceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEE
Q 047355 171 IWNMDSS------------AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238 (312)
Q Consensus 171 iwd~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~ 238 (312)
+||+++. .....+.+|...+.++++ ++++.+|++|+.|+.|++||.++++++..+.+|...|.+++
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT--TQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp EEEC---------------CEEEEEECCSSCEEEEEE--CGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE--CCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEE
Confidence 9999753 234466788888888874 67889999999999999999999999999999999999999
Q ss_pred EeC------CCcEEEEEeCCCcEEEEeCCC
Q 047355 239 FHP------ELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 239 ~~~------~~~~l~s~s~dg~v~iwd~~~ 262 (312)
|++ ++.+|++|+.||+|++|++..
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 986 678999999999999999864
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-39 Score=277.17 Aligned_cols=283 Identities=15% Similarity=0.209 Sum_probs=245.5
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceee-
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASV- 94 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~- 94 (312)
+.++|.+++|+|||++++++..++.+..|.............|..+|.+++|++++++|++++ ||.|++||+.+....
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 456899999999999999998888877776655444444456888999999999999999999 999999999876432
Q ss_pred --eeec--ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce-eeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 95 --KEFE--AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE-CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 95 --~~~~--~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
..+. .|...|.+++|+|+++++++++.|+.|++||+..... ....+..|...+..+.|+| ++..+++++.|+.|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNI 165 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcE
Confidence 2332 7899999999999999999999999999999876532 4456778889999999998 56899999999999
Q ss_pred EEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEE
Q 047355 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 249 (312)
++||+++.+....+..|...+.++.+ ++++.++++++.|+.|++||+++++.+..+. |...+.+++|+|++++++++
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDI--SNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCceeeeeecccCceEEEEE--CCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEE
Confidence 99999999888888899999998875 6788999999999999999999998887765 78889999999999999999
Q ss_pred eCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 250 SEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 250 s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
+.|+.|++||+.+.+.. .+..+...+.+++|+|++++|++++.||.+++|-.+.
T Consensus 243 ~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp ETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 99999999999887653 5677888999999999999999999999999997664
No 63
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.5e-39 Score=321.37 Aligned_cols=289 Identities=21% Similarity=0.372 Sum_probs=253.1
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
.+.+|.+.|++++|+|++++|++|+.||+|++||+.+.+....+..|...|.+++|++++++|++|+.||.|++||+.++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 35578999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred eeeeeecccccceeEEEEec--CCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 92 ASVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 92 ~~~~~~~~h~~~i~~~~~~~--~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
+.+..+.+|...|.+++|+| ++.++++|+.|+.|++||+... .....+.+|...+..+.|+| ++..+++++.||+|
T Consensus 690 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 690 KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTL 767 (1249)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEECCCSSCEEEEEECS-STTEEEEEESSSEE
T ss_pred ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-chhheecCCCCCEEEEEEec-CCCEEEEEECCCeE
Confidence 99999999999999999999 4568899999999999999866 55677889999999999998 45899999999999
Q ss_pred EEEEcCCCcceeee-------------------------------------------------------cccccceeEEE
Q 047355 170 QIWNMDSSAAKFTL-------------------------------------------------------DAHEKGINCID 194 (312)
Q Consensus 170 ~iwd~~~~~~~~~~-------------------------------------------------------~~~~~~v~~~~ 194 (312)
++||+++......+ .+|...+.++.
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 99998765432221 14555666665
Q ss_pred EEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC------------
Q 047355 195 YFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT------------ 262 (312)
Q Consensus 195 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~------------ 262 (312)
+++++.++++++.||.|++||+.++.....+.+|...|++++|+|+++++++++.|+.|++|++.+
T Consensus 848 --~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 925 (1249)
T 3sfz_A 848 --FSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQE 925 (1249)
T ss_dssp --ECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEE
T ss_pred --EcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccce
Confidence 477889999999999999999999999999999999999999999999999999999999998431
Q ss_pred -------------------------------------------------------------------cceeeecccCccc
Q 047355 263 -------------------------------------------------------------------FRLQNTLSSGLER 275 (312)
Q Consensus 263 -------------------------------------------------------------------~~~~~~~~~~~~~ 275 (312)
++....+..|...
T Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~ 1005 (1249)
T 3sfz_A 926 IDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA 1005 (1249)
T ss_dssp EEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC
T ss_pred eeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc
Confidence 2233445567778
Q ss_pred eEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 276 VWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 276 v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
|.+++|+|+++.|++++.||++++|-..+
T Consensus 1006 v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp CCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 99999999999999999999999997654
No 64
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-39 Score=274.60 Aligned_cols=246 Identities=24% Similarity=0.382 Sum_probs=214.9
Q ss_pred eeeeEEecCCceeEEEEeeCC-cEEEEecCCCeEEEEEccC-----ceeeeeecccccceeEEEEecCCCEEEEEeCCCc
Q 047355 51 TEKSVKVTDSPVRTAKFVARE-HWIVCGSDDKFIRVFDYNT-----MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL 124 (312)
Q Consensus 51 ~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~-----~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~ 124 (312)
....+..|..+|.+++|++++ ++|++|+.|++|++|++.. ..++..+.+|...|.+++|+|+++++++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 345678899999999999865 8999999999999999864 2356778999999999999999999999999999
Q ss_pred EEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEc----CC
Q 047355 125 IKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT----SD 200 (312)
Q Consensus 125 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~ 200 (312)
|++||+.+. +....+.+|...|..+.|+| +...+++++.|++|++||++. .....+.+|...+.++.+.+. ++
T Consensus 89 v~~wd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 89 LRLWDVATG-ETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEETTTT-EEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------
T ss_pred EEEEECCCC-CeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 999999876 56678899999999999998 458999999999999999974 566778899999998876432 14
Q ss_pred ceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEE
Q 047355 201 KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIG 280 (312)
Q Consensus 201 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 280 (312)
+.++++++.|+.|++||+++.+....+.+|...|++++|+|++++|++|+.||.|++||+.+.+...++.. ...+.+++
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~ 244 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLA 244 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEE
Confidence 55899999999999999999999999999999999999999999999999999999999999888877765 46799999
Q ss_pred EecCCCeEEEEecCCeEEEEe
Q 047355 281 YKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 281 ~~~~~~~l~~~~~~g~i~v~~ 301 (312)
|+|++..|++++.++ ++++-
T Consensus 245 ~sp~~~~la~~~~~~-i~v~~ 264 (319)
T 3frx_A 245 FSPNRYWLAAATATG-IKVFS 264 (319)
T ss_dssp ECSSSSEEEEEETTE-EEEEE
T ss_pred EcCCCCEEEEEcCCC-cEEEE
Confidence 999999999888766 55553
No 65
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.8e-39 Score=285.48 Aligned_cols=283 Identities=20% Similarity=0.371 Sum_probs=247.4
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEee--CCcEEEEecCCCeEEEEE
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA--REHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~i~iwd 87 (312)
.+.+.+|.+.|.+++|+|++ .|++|+.||+|++||+++++....+..|..+|.++.|.+ ++.++++|+.||.|++||
T Consensus 155 ~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 155 LLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 44567899999999999988 999999999999999999988888988999999999994 678999999999999999
Q ss_pred ccCcee-----------------------eeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCc
Q 047355 88 YNTMAS-----------------------VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS 144 (312)
Q Consensus 88 ~~~~~~-----------------------~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~ 144 (312)
+.+... ...+.+|...|.++ +++++++++++.|+.|++||+... .....+.+|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~ 310 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM-KCLYILSGHT 310 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-EEEEEECCCS
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCC
Confidence 987542 44567888888877 567889999999999999999765 5677788999
Q ss_pred cceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEE
Q 047355 145 HYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCV 224 (312)
Q Consensus 145 ~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 224 (312)
..+..+.|+| ++..+++++.||+|++||+++++....+.+|...+.++.+ + +.++++|+.||.|++||+.+....
T Consensus 311 ~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 311 DRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL--S--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--C--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEE--c--CCEEEEEeCCCcEEEEECCCCcee
Confidence 9999999998 4589999999999999999999999999999999998875 2 578999999999999999988766
Q ss_pred EEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee-cccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 225 QILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT-LSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 225 ~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
.... |...+..++|+|+++++++|+ ||.|++||+.+++++.. +..+...|++++|+ +...+++++++|.+.+++.+
T Consensus 386 ~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 386 FSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred eeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEee
Confidence 5554 667788899999999999999 89999999999998875 66778899999997 45666777889999999876
Q ss_pred C
Q 047355 304 S 304 (312)
Q Consensus 304 ~ 304 (312)
.
T Consensus 463 f 463 (464)
T 3v7d_B 463 F 463 (464)
T ss_dssp C
T ss_pred c
Confidence 5
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.3e-39 Score=284.94 Aligned_cols=271 Identities=28% Similarity=0.472 Sum_probs=243.6
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
.+.+.+|.+.|.+++|+ ++.+++|+.||+|++||+.+++....+..|...|.++.|. ++.+++|+.||.|++||+.
T Consensus 152 ~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 152 LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS
T ss_pred EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC
Confidence 35577899999999997 5699999999999999999998888888899999998885 6789999999999999999
Q ss_pred CceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 90 TMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 90 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
+++....+.+|...|.++++ ++.++++|+.|+.|++||++.. .....+.+|...+..+.| ++..+++++.|+.|
T Consensus 228 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i 301 (445)
T 2ovr_B 228 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSI 301 (445)
T ss_dssp SCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-EEEEEECCCSSCEEEEEE---CSSEEEEEETTSCE
T ss_pred CCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-cEeEEecCCCCceEEEEE---CCCEEEEEeCCCeE
Confidence 99999999999999999998 6788999999999999998765 566778899999999998 45789999999999
Q ss_pred EEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc---cccCeEEEEEeCCCcEE
Q 047355 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG---HTNNVTAVCFHPELRII 246 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~i~~l~~~~~~~~l 246 (312)
++||+++.+....+.+|...+.++.+ ++.++++|+.||.|++||+++++.+..+.+ |...|++++|+ +++|
T Consensus 302 ~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l 375 (445)
T 2ovr_B 302 RVWDVETGNCIHTLTGHQSLTSGMEL----KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFV 375 (445)
T ss_dssp EEEETTTCCEEEEECCCCSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEE
T ss_pred EEEECCCCCEEEEEcCCcccEEEEEE----eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEE
Confidence 99999999999999999888887764 356899999999999999999999988876 88899999996 4789
Q ss_pred EEEeCCCcEEEEeCCCcceeeec-----ccCccceEEEEEecCCCeEEEEecCCe
Q 047355 247 ITASEDGTILIWNATTFRLQNTL-----SSGLERVWSIGYKKGSNQVAFGCDNGT 296 (312)
Q Consensus 247 ~s~s~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~g~ 296 (312)
++|+.||.|++||+.+++....+ ..+...|++++|+|++..|++|+.||+
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 99999999999999999887777 456788999999999999999999997
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.3e-39 Score=293.56 Aligned_cols=288 Identities=16% Similarity=0.207 Sum_probs=238.2
Q ss_pred hhhhcccCcEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEecCC---ceeEEEEeeC-CcEEEEecCCCeEEE
Q 047355 11 KEFIQKSDRVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDS---PVRTAKFVAR-EHWIVCGSDDKFIRV 85 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~g~~dg~i~i 85 (312)
..+.+|.+.|.+++|+|+++ .+++++.|+.|++||+...+....+..+.. .+.+++|+++ +++|++++.||.|++
T Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 34667889999999999998 799999999999999998888888888888 8999999999 999999999999999
Q ss_pred EEccCceeeeee-c---ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee-------------------------
Q 047355 86 FDYNTMASVKEF-E---AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC------------------------- 136 (312)
Q Consensus 86 wd~~~~~~~~~~-~---~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~------------------------- 136 (312)
||+.+++.+..+ . .|...|.+++|+ ++.++++++.|+.+++||+......
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 312 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI 312 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEE
T ss_pred EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeE
Confidence 999999888888 6 899999999999 9999999999999999998643210
Q ss_pred -------------------eeEecCCccceEEEEeCCC--------------------------------CCCEEEE---
Q 047355 137 -------------------TQTFEGHSHYVMQSAFNPK--------------------------------DLNTFAS--- 162 (312)
Q Consensus 137 -------------------~~~~~~~~~~v~~~~~~~~--------------------------------~~~~~~s--- 162 (312)
...+.+|...+..+.| |. ....+++
T Consensus 313 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 391 (615)
T 1pgu_A 313 ISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISW 391 (615)
T ss_dssp EEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEET
T ss_pred EEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeC
Confidence 1122233333333333 21 1233344
Q ss_pred ----------------------------------------------------------------------EeC-CCeEEE
Q 047355 163 ----------------------------------------------------------------------ASL-DGTIQI 171 (312)
Q Consensus 163 ----------------------------------------------------------------------~s~-dg~v~i 171 (312)
++. |+.|++
T Consensus 392 d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~ 471 (615)
T 1pgu_A 392 DDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQV 471 (615)
T ss_dssp TTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEE
T ss_pred CCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEE
Confidence 444 555555
Q ss_pred EEcCCCcce-eeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc-cccCeEEEEEeC--------
Q 047355 172 WNMDSSAAK-FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG-HTNNVTAVCFHP-------- 241 (312)
Q Consensus 172 wd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~i~~l~~~~-------- 241 (312)
||+.+.... ..+..|...+.++++ ++++.+|++|+.||.|++||+.+++.+..+.+ |...|++++|+|
T Consensus 472 ~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~ 549 (615)
T 1pgu_A 472 FKLSDLEVSFDLKTPLRAKPSYISI--SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE 549 (615)
T ss_dssp EETTEEEEEEECSSCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------
T ss_pred EECCCccccccccCCccCceEEEEE--CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccccc
Confidence 555443332 445667778888874 78999999999999999999999999999888 999999999999
Q ss_pred --CCcEEEEEeCCCcEEEEeCCCc-ceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 242 --ELRIIITASEDGTILIWNATTF-RLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 242 --~~~~l~s~s~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
++++|++++.||.|++||+.+. +....+..|...|.+++|+|+++ |++++.||+|++|-.+
T Consensus 550 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 550 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred ccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9999999999999999999987 78888999999999999999999 9999999999999654
No 68
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.6e-39 Score=275.20 Aligned_cols=257 Identities=15% Similarity=0.204 Sum_probs=219.7
Q ss_pred hhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCC----ceeeeEEecCCceeEEEEee--CCcEEEEecCCCe
Q 047355 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ----TTEKSVKVTDSPVRTAKFVA--REHWIVCGSDDKF 82 (312)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~dg~ 82 (312)
+++.+.+|.+.|.+++|+|++++|++|+.||.|++||+... +....+..|..+|.+++|++ ++++|++|+.||.
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 34567789999999999999999999999999999999865 35566678899999999998 5899999999999
Q ss_pred EEEEEccCc---------eeeeeecccccceeEEEEecC--CCEEEEEeCCCcEEEEeCCCCceeee------------E
Q 047355 83 IRVFDYNTM---------ASVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIKLWDWEKNWECTQ------------T 139 (312)
Q Consensus 83 i~iwd~~~~---------~~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~iwd~~~~~~~~~------------~ 139 (312)
|++||+++. .....+..|...|.+++|+|+ +.++++++.|+.|++||++....... .
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999876 557788899999999999999 99999999999999999875432110 0
Q ss_pred ecCCccceEEEEeCCC--CCCEEEEEeCCCeEEEEEcCCCcc--eeeecccccceeEEEEEEcCCc----eEEEEEeCCC
Q 047355 140 FEGHSHYVMQSAFNPK--DLNTFASASLDGTIQIWNMDSSAA--KFTLDAHEKGINCIDYFITSDK----VYLITGSDDF 211 (312)
Q Consensus 140 ~~~~~~~v~~~~~~~~--~~~~~~s~s~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~----~~l~sg~~dg 211 (312)
...|...+..+.|+|. +...+++++.|+.+.+|+...... ...+.+|...+.++++ ++++ .+|++|+.||
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~--~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISW--APSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEE--CCCSSCSSEEEEEEETTS
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEE--CCCCCCcceEEEEEcCCC
Confidence 1256778899999986 468999999999998888877654 5667789999999885 5676 8999999999
Q ss_pred eEEEEeCCCC----------------------------------------------eEEEEecccccCeEEEEEeCCCcE
Q 047355 212 TVKVWDYETK----------------------------------------------TCVQILEGHTNNVTAVCFHPELRI 245 (312)
Q Consensus 212 ~i~vwd~~~~----------------------------------------------~~~~~~~~h~~~i~~l~~~~~~~~ 245 (312)
.|++||++++ +.+..+.+|...|++++|+|++++
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE
Confidence 9999998764 567778899999999999999999
Q ss_pred EEEEeCCCcEEEEeCCCcceee
Q 047355 246 IITASEDGTILIWNATTFRLQN 267 (312)
Q Consensus 246 l~s~s~dg~v~iwd~~~~~~~~ 267 (312)
|++|+.||.|++|++.+.+...
T Consensus 321 l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCEE
T ss_pred EEEecCCCcEEEEecCcCcchh
Confidence 9999999999999998765443
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.4e-38 Score=282.17 Aligned_cols=276 Identities=21% Similarity=0.401 Sum_probs=245.3
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
.+.+|.+.|.. ++++++++|++|+.||+|++||+.+++....+..|..+|.++.|. ++.+++|+.||.|++||+.++
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence 45677776533 355578999999999999999999999888999999999999997 679999999999999999999
Q ss_pred eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEE
Q 047355 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQI 171 (312)
Q Consensus 92 ~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~i 171 (312)
+....+.+|...|.++.++ ++.+++|+.||.|++||+... .....+.+|...+..+.+ ++..+++++.||.|++
T Consensus 190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKV 263 (445)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC-CEEEEEECCSSCEEEEEE---CSSCEEEEETTSCEEE
T ss_pred cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC-cEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEE
Confidence 9999999999999999996 467999999999999998765 556778889999999998 3478999999999999
Q ss_pred EEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeC
Q 047355 172 WNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 172 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~ 251 (312)
||+++.+....+.+|...+.++.+ ++.++++|+.|+.|++||+++++++..+.+|...+.++.++ +.++++|+.
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 337 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNA 337 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEE----CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEET
T ss_pred EECCCCcEeEEecCCCCceEEEEE----CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeC
Confidence 999999988899999999998875 67889999999999999999999999999999999988875 468999999
Q ss_pred CCcEEEEeCCCcceeeeccc---CccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 252 DGTILIWNATTFRLQNTLSS---GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 252 dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
||.|++||+.+++...++.. +...|.+++|+ ++.|++|+.||+|+||-.++
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCC
Confidence 99999999999988888776 77889999985 68999999999999997654
No 70
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.4e-39 Score=279.93 Aligned_cols=278 Identities=12% Similarity=0.110 Sum_probs=213.9
Q ss_pred cCcEEEEEEcCCCCeEEEEecCC-------eEEEEeccCCcee--------e--eEEecCCceeEEEEeeCCcEEEEe--
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSG-------TVCIWNYHSQTTE--------K--SVKVTDSPVRTAKFVAREHWIVCG-- 77 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg-------~v~iw~~~~~~~~--------~--~~~~~~~~v~~~~~~~~~~~l~~g-- 77 (312)
.-+|++++|+||+++|++|+.|. +|++|+++..... . .+..++..+.++.+ ++..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEEC
Confidence 34899999999999999987643 5999998654321 1 12334455666554 45566655
Q ss_pred ---------cCCCeEEEEEccCcee-e---ee-----ecccccceeEEEEecCCCEEEE--EeCCCcEEEEeCCCCceee
Q 047355 78 ---------SDDKFIRVFDYNTMAS-V---KE-----FEAHEDYIRSLAVHPTFPFVLT--ASDDKLIKLWDWEKNWECT 137 (312)
Q Consensus 78 ---------~~dg~i~iwd~~~~~~-~---~~-----~~~h~~~i~~~~~~~~~~~l~t--~s~d~~v~iwd~~~~~~~~ 137 (312)
+.|+.+++|++.+... . .. ...+...+.+++|+|+++++++ ++.|++|++||+... ...
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL-TEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT-EEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC-cEE
Confidence 4578899999865421 1 11 1234567899999999998764 457999999999876 444
Q ss_pred eEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCccee--eecccccceeEEEEEEcCCceEEEEEeCCC----
Q 047355 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF--TLDAHEKGINCIDYFITSDKVYLITGSDDF---- 211 (312)
Q Consensus 138 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg---- 211 (312)
..+. |...|..+.|+| ++.++++++.+ .+++|+..++.... ....|...+.++.| +|++.++++++.|+
T Consensus 171 ~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f--spdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINF--IADDTVLIAASLKKGKGI 245 (365)
T ss_dssp EEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEE--EETTEEEEEEEESSSCCE
T ss_pred EEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEE--cCCCCEEEEEecCCccee
Confidence 4444 667899999998 55788888755 56667666665443 34567788888875 56889999999887
Q ss_pred eEEEEeCCCCeE----EEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee-cccCccceEEEEEecCCC
Q 047355 212 TVKVWDYETKTC----VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT-LSSGLERVWSIGYKKGSN 286 (312)
Q Consensus 212 ~i~vwd~~~~~~----~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 286 (312)
.++.|+...... ...+.+|...|++++|+|++++||+|+.|++|+|||+.+++++.+ +.+|...|++|+|+|||+
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred EEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 688899876543 356778999999999999999999999999999999999998887 478999999999999999
Q ss_pred eEEEEecCCeEEEEec
Q 047355 287 QVAFGCDNGTLIVKIG 302 (312)
Q Consensus 287 ~l~~~~~~g~i~v~~~ 302 (312)
+|++|+.|++|+||--
T Consensus 326 ~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 326 YVASVSAANTIHIIKL 341 (365)
T ss_dssp EEEEEETTSEEEEEEC
T ss_pred EEEEEeCCCeEEEEEc
Confidence 9999999999999964
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4e-40 Score=279.42 Aligned_cols=250 Identities=20% Similarity=0.308 Sum_probs=206.5
Q ss_pred eEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce--eeeeecccccceeEEEEec--CCCEEEEEeCCCcEEEEe
Q 047355 54 SVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA--SVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIKLWD 129 (312)
Q Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~--~~~~l~t~s~d~~v~iwd 129 (312)
.+..|..+|.+++|++++++|++|+.|++|++||+.+.. ....+.+|..+|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 345788899999999999999999999999999998764 4677899999999999975 478999999999999999
Q ss_pred CCCCc-eeeeEecCCccceEEEEeCCCC-CCEEEEEeCCCeEEEEEcCCCcc---eeeecccccceeEEEEEEcC-----
Q 047355 130 WEKNW-ECTQTFEGHSHYVMQSAFNPKD-LNTFASASLDGTIQIWNMDSSAA---KFTLDAHEKGINCIDYFITS----- 199 (312)
Q Consensus 130 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~s~dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~----- 199 (312)
++... .....+.+|...|..+.|+|.. +.++++++.|++|++||++.... ...+.+|...+.++.|.+..
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 87642 3456678899999999999963 57899999999999999987532 34556788888888764321
Q ss_pred ----------CceEEEEEeCCCeEEEEeCCCC---eEEEEecccccCeEEEEEeCCC----cEEEEEeCCCcEEEEeCCC
Q 047355 200 ----------DKVYLITGSDDFTVKVWDYETK---TCVQILEGHTNNVTAVCFHPEL----RIIITASEDGTILIWNATT 262 (312)
Q Consensus 200 ----------~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~i~~l~~~~~~----~~l~s~s~dg~v~iwd~~~ 262 (312)
++.+|++|+.|+.|++||.+.. +++..+.+|...|++++|+|++ ++|++|+.|++|++|++.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 1468999999999999999754 5677889999999999999986 7899999999999999876
Q ss_pred cc----eeeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 263 FR----LQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 263 ~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
.. ....+..+...|++++|+|+++.|++++.||+++||-..
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 21 123345567889999999999999999999999999765
No 72
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-39 Score=278.37 Aligned_cols=252 Identities=15% Similarity=0.264 Sum_probs=217.6
Q ss_pred hhhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEecc--CCceeeeEEecCCceeEEEEeeC--CcEEEEecCCCeEE
Q 047355 9 IEKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYH--SQTTEKSVKVTDSPVRTAKFVAR--EHWIVCGSDDKFIR 84 (312)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~dg~i~ 84 (312)
+...+.+|.+.|.+++|+|++++|++|+.||.|++|++. ..+....+..|..+|.+++|+++ +.+|++|+.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 345678999999999999999999999999999999997 44556677788999999999876 89999999999999
Q ss_pred EEEccCce--eeeeecccccceeEEEEecC--CCEEEEEeCCCcEEEEeCCCCc-eeeeEecCCccceEEEEeCCC----
Q 047355 85 VFDYNTMA--SVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIKLWDWEKNW-ECTQTFEGHSHYVMQSAFNPK---- 155 (312)
Q Consensus 85 iwd~~~~~--~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~---- 155 (312)
+||+.+.+ ....+..|...|.+++|+|+ +.++++++.|+.|++||+.... .....+..|...+..+.|+|.
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999876 67778889999999999999 8999999999999999987652 234456789999999999995
Q ss_pred --------CCCEEEEEeCCCeEEEEEcCCCcc----eeeecccccceeEEEEEEcCC---ceEEEEEeCCCeEEEEeCCC
Q 047355 156 --------DLNTFASASLDGTIQIWNMDSSAA----KFTLDAHEKGINCIDYFITSD---KVYLITGSDDFTVKVWDYET 220 (312)
Q Consensus 156 --------~~~~~~s~s~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~---~~~l~sg~~dg~i~vwd~~~ 220 (312)
+...+++++.|+.|++||+++... ...+.+|...+.+++| +|+ +.++++++.||.|++||+++
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~--sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW--SPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE--CCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE--CCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 578999999999999999987653 3466789999998875 677 89999999999999999987
Q ss_pred Ce---EEEEe--cccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 221 KT---CVQIL--EGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 221 ~~---~~~~~--~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
+. ....+ ..|...|++++|+|++++|++++.||.|++|++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 53 22333 34888999999999999999999999999999863
No 73
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.6e-39 Score=275.38 Aligned_cols=247 Identities=18% Similarity=0.321 Sum_probs=206.2
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
+.+.+|...|.+++|+|++.++++|+.|++|++||+.+++....+..|...|.+++|+|++++|++|+.|+.|++||+..
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 45778999999999999999999999999999999999988889999999999999999999999999999999999975
Q ss_pred ceeeee--ecccccceeEEEEecCC----------CEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCC
Q 047355 91 MASVKE--FEAHEDYIRSLAVHPTF----------PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158 (312)
Q Consensus 91 ~~~~~~--~~~h~~~i~~~~~~~~~----------~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 158 (312)
...... ...|...|.+++|+|++ .++++++.|+.|++||.. ......+.+|...+..+.|+| ++.
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~-~g~ 226 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISP-NGK 226 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECT-TSS
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECC-CCC
Confidence 332221 23788999999999987 789999999999999943 355667889999999999998 468
Q ss_pred EEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE--Eec--------
Q 047355 159 TFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ--ILE-------- 228 (312)
Q Consensus 159 ~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~-------- 228 (312)
+|++++.|++|++||++..........+...+.+++| +|++.++++| .|+.|++||+.+.+... .+.
T Consensus 227 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~--sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 227 YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAF--NPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEE--CSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEE--CCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 9999999999999999544332222234456887775 6788777655 57889999997654332 333
Q ss_pred ---ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCc
Q 047355 229 ---GHTNNVTAVCFHPELRIIITASEDGTILIWNATTF 263 (312)
Q Consensus 229 ---~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~ 263 (312)
+|...|++++|+|++++|++|+.||.|++|++.++
T Consensus 304 ~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp TBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 68888999999999999999999999999998653
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=277.39 Aligned_cols=290 Identities=17% Similarity=0.287 Sum_probs=241.2
Q ss_pred hhhcccCcEEEEEEcC-CCCeEEEEecCCeEEEEeccCCceeeeEE-------------ecCCceeEEEEee-CCcEEEE
Q 047355 12 EFIQKSDRVKSVDFHP-TQPWVLASLYSGTVCIWNYHSQTTEKSVK-------------VTDSPVRTAKFVA-REHWIVC 76 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~~ 76 (312)
.+.+|.+.|.+++|+| ++++|++|+.||.|++||+...+....+. .|...|.+++|++ ++.++++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 4556899999999999 99999999999999999998766554443 3788999999999 7789999
Q ss_pred ecCCCeEEEEEccCceeeeeecccccceeEEEEecCC---CEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeC
Q 047355 77 GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTF---PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFN 153 (312)
Q Consensus 77 g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~---~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 153 (312)
++.||.|++||+.+.+....+. +...+.++.++|.+ .++++++.|+.+++||++.. .....+..|...+..+.|+
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-SCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-CCCEEECCCCSCEEEEEEC
T ss_pred EeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-ceeeeecCCCCcEEEEEEC
Confidence 9999999999999988777665 67789999998854 48999999999999999765 5567788899999999999
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCc-ceeee---------------cccccceeEEEEEEcCCceEEEEEeCCCeEEEEe
Q 047355 154 PKDLNTFASASLDGTIQIWNMDSSA-AKFTL---------------DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217 (312)
Q Consensus 154 ~~~~~~~~s~s~dg~v~iwd~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd 217 (312)
|.+..++++++.||.|++||+++.. ....+ ..|...+.++++ ++++.++++++.||.|++||
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF--TSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE--CTTSSEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE--cCCCCEEEEecCCCeEEEEE
Confidence 9765579999999999999998764 22222 567788888875 67899999999999999999
Q ss_pred CCCCeEEEEecccc-----cCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEe
Q 047355 218 YETKTCVQILEGHT-----NNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 218 ~~~~~~~~~~~~h~-----~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
+.+++....+..+. ..+...........+++++.|+.|++||+.+++....+..|...|.+++|+|++++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC
Confidence 99877654443321 1222222233455677888899999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeccCC
Q 047355 293 DNGTLIVKIGNSS 305 (312)
Q Consensus 293 ~~g~i~v~~~~~~ 305 (312)
.||.|++|-.+..
T Consensus 354 ~dg~i~iw~~~~~ 366 (408)
T 4a11_B 354 RDCNILAWVPSLY 366 (408)
T ss_dssp TTSCEEEEEECC-
T ss_pred CCCeEEEEeCCCC
Confidence 9999999987654
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.7e-38 Score=290.44 Aligned_cols=281 Identities=14% Similarity=0.181 Sum_probs=252.6
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCC----ceeeeEEecCCc-eeEEEEee--CCcEEEEecCCCeEEEEE
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ----TTEKSVKVTDSP-VRTAKFVA--REHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~g~~dg~i~iwd 87 (312)
.|.+.|.+++|+|++++|++++ ++.|++|++++. +....+..|... |.+++|+| ++++|++|+.||.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 4678999999999999999988 899999999987 778888889999 99999999 999999999999999999
Q ss_pred ccCc--------eeeeeecccccceeEEEEecCCCEEEEEeCC----CcEEEEeCCCCceeeeEecCCccceEEEEeCCC
Q 047355 88 YNTM--------ASVKEFEAHEDYIRSLAVHPTFPFVLTASDD----KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155 (312)
Q Consensus 88 ~~~~--------~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d----~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 155 (312)
+.++ .....+..|..+|.+++|+|+++++++++.+ +.+++||.. .....+.+|...+..+.|+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG---NSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC---CEEEECCSCSSCEEEEEECSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC---CcceeeecCCccEEEEEECCC
Confidence 9744 5677788899999999999999999999987 688888832 456778899999999999997
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcceeeeccccc---ceeEEEEEEcCC-ceEEEEEeCCCeEEEEeCCCCeEEEEe-c--
Q 047355 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSD-KVYLITGSDDFTVKVWDYETKTCVQIL-E-- 228 (312)
Q Consensus 156 ~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~-~-- 228 (312)
+...+++++.|+.|++||+.+.+....+..|.. .+.++++ +++ +.++++++.|+.|++||+++++.+..+ .
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 249 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF--SPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 249 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE--CSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE--CCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence 655899999999999999999998889999988 8998875 678 899999999999999999999999988 6
Q ss_pred -ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC----ccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 229 -GHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG----LERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 229 -~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
.|...|.+++|+ ++++|++++.|+.|++||+.+++....+..+ ...+.++.|. +++.|++++.+|.+++|-.+
T Consensus 250 ~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 250 EPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp BCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETT
T ss_pred cccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECC
Confidence 899999999999 9999999999999999999998887777665 3668888885 99999999999999998755
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-38 Score=302.03 Aligned_cols=204 Identities=14% Similarity=0.184 Sum_probs=174.5
Q ss_pred hcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCcee
Q 047355 14 IQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS 93 (312)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 93 (312)
.+|.+.|.+++|+|++++||+|+.||+|++|+....+....+ .+..+|..++|++ +++|++++.|++|++||+.+++.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 478899999999999999999999999999998766544333 3567899999999 88999999999999999999888
Q ss_pred eeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceee----------eEecCCccceEEEEeCCCCCCEEEEE
Q 047355 94 VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECT----------QTFEGHSHYVMQSAFNPKDLNTFASA 163 (312)
Q Consensus 94 ~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~~s~ 163 (312)
+..+. |...|++++|+|+++++++|+.||.|++||+....... ....+|...|.+++|+|.+...++++
T Consensus 92 ~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 87775 66889999999999999999999999999997653211 23467888999999999766789999
Q ss_pred eCCCeEEEEEcCCCcceeeeccc------------------ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeE
Q 047355 164 SLDGTIQIWNMDSSAAKFTLDAH------------------EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223 (312)
Q Consensus 164 s~dg~v~iwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 223 (312)
+.|+.| +||+++.+....+..| ...|.+++| +|++.+|++|+.||.|++||++++++
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f--spdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY--HPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE--CTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE--cCCCCEEEEEECCCeEEEEECCCCcE
Confidence 999999 9999998877777655 456888875 78899999999999999999866544
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=301.60 Aligned_cols=287 Identities=14% Similarity=0.164 Sum_probs=216.1
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCcee-----------eeEEecCCceeEEEEeeC-CcEEEEecCCCeE
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTE-----------KSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFI 83 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~g~~dg~i 83 (312)
+.+.|.+++|+|++++|++|+.||+|++||+++.+.. .....|..+|.+++|+|+ +..+++|+.||.|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v 176 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL 176 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE
Confidence 5678999999999999999999999999999876543 122446789999999996 4789999999999
Q ss_pred EEEEccCceeeeeeccc------------------ccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeee-Ee---c
Q 047355 84 RVFDYNTMASVKEFEAH------------------EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ-TF---E 141 (312)
Q Consensus 84 ~iwd~~~~~~~~~~~~h------------------~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~-~~---~ 141 (312)
+||+++.+..+.+..| ...|.+++|+|++.+|++++.|+.|++||++....... .+ .
T Consensus 177 -lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~ 255 (902)
T 2oaj_A 177 -TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETE 255 (902)
T ss_dssp -EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSC
T ss_pred -EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccc
Confidence 9999998888777655 57799999999999999999999999999876432211 11 1
Q ss_pred C-------------CccceEEEEeC----CCCCCEEEEE-----------------------------------------
Q 047355 142 G-------------HSHYVMQSAFN----PKDLNTFASA----------------------------------------- 163 (312)
Q Consensus 142 ~-------------~~~~v~~~~~~----~~~~~~~~s~----------------------------------------- 163 (312)
. |...|..+.|+ |.+..+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 335 (902)
T 2oaj_A 256 INVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMK 335 (902)
T ss_dssp TTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEE
T ss_pred cCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceE
Confidence 1 23356666663 2112234444
Q ss_pred -----------------------------------eCCCeEEEEEcCCCccee-------eecccccceeEEEEE-----
Q 047355 164 -----------------------------------SLDGTIQIWNMDSSAAKF-------TLDAHEKGINCIDYF----- 196 (312)
Q Consensus 164 -----------------------------------s~dg~v~iwd~~~~~~~~-------~~~~~~~~v~~~~~~----- 196 (312)
+.|++|++||+.++.... .+..|...+.++.+.
T Consensus 336 ~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~ 415 (902)
T 2oaj_A 336 IFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNK 415 (902)
T ss_dssp EECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHH
T ss_pred EEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHH
Confidence 444555555554332111 122333445555442
Q ss_pred ---------------------------EcCCceEEEEEeCCCeEEEEeCCCCeE-----EE-Eec-----ccccCeEEEE
Q 047355 197 ---------------------------ITSDKVYLITGSDDFTVKVWDYETKTC-----VQ-ILE-----GHTNNVTAVC 238 (312)
Q Consensus 197 ---------------------------~~~~~~~l~sg~~dg~i~vwd~~~~~~-----~~-~~~-----~h~~~i~~l~ 238 (312)
+++++.++++|+.|++|++||+.++.. +. .+. +|...|++++
T Consensus 416 ~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~sva 495 (902)
T 2oaj_A 416 LWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKIS 495 (902)
T ss_dssp HHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEE
T ss_pred HHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEE
Confidence 246789999999999999999976632 11 112 7889999999
Q ss_pred EeCCCcEEEEEeCCCcEEEEeCCCcc---------------------------------------------eeeecccCc
Q 047355 239 FHPELRIIITASEDGTILIWNATTFR---------------------------------------------LQNTLSSGL 273 (312)
Q Consensus 239 ~~~~~~~l~s~s~dg~v~iwd~~~~~---------------------------------------------~~~~~~~~~ 273 (312)
|+|++++||+|+.||+|+|||+.+.+ .+.++..|.
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~ 575 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK 575 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC
Confidence 99999999999999999999987652 256677889
Q ss_pred cceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 274 ERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 274 ~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
..|++|+|+||| +||+|+.||+|+||=.+.
T Consensus 576 ~~V~svafSpdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 576 GKTSAINNSNIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp CSEEEEEECBTS-EEEEEETTSEEEEEETTT
T ss_pred CcEEEEEecCCc-EEEEEeCCCcEEEEECCC
Confidence 999999999999 999999999999986543
No 78
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.7e-37 Score=269.97 Aligned_cols=255 Identities=22% Similarity=0.344 Sum_probs=213.8
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc-
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM- 91 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~- 91 (312)
+.+|.+.|.+|+|+|+|++|++|+.||+|++||+.+++....+..|...+.++.+ ++..|++|+.|+.+++||....
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccc
Confidence 4467788999999999999999999999999999999998888888888877655 5789999999999999998764
Q ss_pred eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc---eeeeEecCCccceEEEEeCCCCCCEEEEE--eCC
Q 047355 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW---ECTQTFEGHSHYVMQSAFNPKDLNTFASA--SLD 166 (312)
Q Consensus 92 ~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~s~--s~d 166 (312)
..+..+.+|...+..+.++|++.++++++.|+.+++||..... ........|...|..+.|+|.+...++++ +.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 4567788999999999999999999999999999999986542 23456778889999999999888887764 579
Q ss_pred CeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEe--CCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCc
Q 047355 167 GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS--DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244 (312)
Q Consensus 167 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~ 244 (312)
++|++||+.++.....+..|. .+.++.+ .+++..+++++ .|+.|++||+.+++++..+.+|.+.|++++|+|+++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~-~v~~~~~--~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~ 377 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHS-QVCSILW--SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGA 377 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSS-CEEEEEE--ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CEEEEEeCCccccceeecccc-ceeeeee--cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 999999999998887776654 4555554 45556666544 799999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCcceeeecccC
Q 047355 245 IIITASEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 245 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
+|+||+.|++|++||+.+.....+.+.+
T Consensus 378 ~l~S~s~D~tvriWdv~~~~~~~~~~~~ 405 (420)
T 4gga_A 378 TVASAAADETLRLWRCFELDPARRRERE 405 (420)
T ss_dssp CEEEEETTTEEEEECCSCSSCC------
T ss_pred EEEEEecCCeEEEEECCCCCccchhhhc
Confidence 9999999999999999775554444433
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.9e-38 Score=270.57 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=211.6
Q ss_pred ccCcEEEEEEcCC----CCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEee-CCcEEEEecCCCeEEEEEccC
Q 047355 16 KSDRVKSVDFHPT----QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVA-REHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 16 ~~~~i~~~~~~~~----~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~ 90 (312)
|...|.+++|+|+ +++|++|+.||.|++||+.+.+....+..+..+|.++.|++ ++.+|++|+.||.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 5578999999999 67999999999999999999988888988999999999999 899999999999999999999
Q ss_pred ceeeeee---cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee---------------------------eeEe
Q 047355 91 MASVKEF---EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC---------------------------TQTF 140 (312)
Q Consensus 91 ~~~~~~~---~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~---------------------------~~~~ 140 (312)
.+....+ ..|...|.+++|+|++.++++++.|+.|++||++..... ....
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 8888887 789999999999999999999999999999998753211 1122
Q ss_pred cCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc--------------eeeecccccceeEEEEEEcCCceEEEE
Q 047355 141 EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA--------------KFTLDAHEKGINCIDYFITSDKVYLIT 206 (312)
Q Consensus 141 ~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~s 206 (312)
..|...+..+.|+ +..+++++.|+.|++||+++... ...+..|...+.++++.+.+++.+|++
T Consensus 228 ~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 228 DIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp SSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred cCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 3488889999997 36999999999999999987644 556677888888888766555899999
Q ss_pred EeCCCeEEEEeCCCCe----EEEEeccc--ccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 207 GSDDFTVKVWDYETKT----CVQILEGH--TNNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 207 g~~dg~i~vwd~~~~~----~~~~~~~h--~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
|+.||.|++||+.+++ ....+.+| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 305 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 305 GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999998764 45567777 78999999999999999999999999999853
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-37 Score=266.42 Aligned_cols=253 Identities=19% Similarity=0.306 Sum_probs=216.8
Q ss_pred eeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc--CceeeeeecccccceeEEEEecC--CCEEEEEeCCCcEE
Q 047355 51 TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN--TMASVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIK 126 (312)
Q Consensus 51 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~ 126 (312)
....+..|..+|.+++|++++++|++|+.||.|++||+. +......+.+|...|.+++|+++ +.+|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 456778899999999999999999999999999999998 55677788999999999999877 89999999999999
Q ss_pred EEeCCCCc-eeeeEecCCccceEEEEeCCCC-CCEEEEEeCCCeEEEEEcCCCc--ceeeecccccceeEEEEEEcC---
Q 047355 127 LWDWEKNW-ECTQTFEGHSHYVMQSAFNPKD-LNTFASASLDGTIQIWNMDSSA--AKFTLDAHEKGINCIDYFITS--- 199 (312)
Q Consensus 127 iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~s~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~--- 199 (312)
+||+.... .....+..|...+..+.|+|.. +..+++++.|+.|++||+++.. ....+..|...+.++.+.+..
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99987653 2556778899999999999863 5899999999999999998763 445667888899998864321
Q ss_pred --------CceEEEEEeCCCeEEEEeCCCCe----EEEEecccccCeEEEEEeCC---CcEEEEEeCCCcEEEEeCCCcc
Q 047355 200 --------DKVYLITGSDDFTVKVWDYETKT----CVQILEGHTNNVTAVCFHPE---LRIIITASEDGTILIWNATTFR 264 (312)
Q Consensus 200 --------~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~i~~l~~~~~---~~~l~s~s~dg~v~iwd~~~~~ 264 (312)
++.++++|+.|+.|++||++++. +...+.+|...|++++|+|+ +++|++++.||.|++||+.+.+
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 68899999999999999987643 55678899999999999999 8999999999999999998753
Q ss_pred -----eeeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 265 -----LQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 265 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
.......+...+++++|+|+++.|++++.||.++||-.+
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 223333477889999999999999999999999999765
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.2e-38 Score=309.90 Aligned_cols=291 Identities=22% Similarity=0.322 Sum_probs=252.4
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEE----------------------------------
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK---------------------------------- 56 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~---------------------------------- 56 (312)
..+.+|.+.|.+++|+|+++++++++.||+|++||+.+.+....+.
T Consensus 737 ~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 816 (1249)
T 3sfz_A 737 NTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA 816 (1249)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred heecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence 3466789999999999999999999999999999987654332221
Q ss_pred ---------------------ecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCE
Q 047355 57 ---------------------VTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115 (312)
Q Consensus 57 ---------------------~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~ 115 (312)
.+...+..+.|++++.++++++.||.|++||+.+......+.+|...|.+++|+|++++
T Consensus 817 ~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 896 (1249)
T 3sfz_A 817 AKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSS 896 (1249)
T ss_dssp ETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred cCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCE
Confidence 34567889999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEeCCCC--------------------------------------------------------------
Q 047355 116 VLTASDDKLIKLWDWEKN-------------------------------------------------------------- 133 (312)
Q Consensus 116 l~t~s~d~~v~iwd~~~~-------------------------------------------------------------- 133 (312)
+++++.|+.+++||....
T Consensus 897 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 976 (1249)
T 3sfz_A 897 FLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYV 976 (1249)
T ss_dssp EEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEE
T ss_pred EEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEE
Confidence 999999999999985310
Q ss_pred ----------------ceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEE
Q 047355 134 ----------------WECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197 (312)
Q Consensus 134 ----------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 197 (312)
......+.+|...+..+.|+| ++..+++++.||+|++||+.++... .+..|...+.++.+
T Consensus 977 ~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~~~~~-- 1052 (1249)
T 3sfz_A 977 AFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRL-- 1052 (1249)
T ss_dssp EEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEEEEEE--
T ss_pred EEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCceE-EEecCCCcEEEEEE--
Confidence 011123346777888899998 4578999999999999999987655 45578888888875
Q ss_pred cCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceE
Q 047355 198 TSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVW 277 (312)
Q Consensus 198 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~ 277 (312)
.+++ .+++++.|+.|++||+.+++....+.+|.+.|++++|+|+++++++++.|++|++||+.+++....+..|...|.
T Consensus 1053 ~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~ 1131 (1249)
T 3sfz_A 1053 LQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVR 1131 (1249)
T ss_dssp CSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEE
T ss_pred cCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEE
Confidence 4555 578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCeEEEEecCCeEEEEeccCCC
Q 047355 278 SIGYKKGSNQVAFGCDNGTLIVKIGNSSG 306 (312)
Q Consensus 278 ~~~~~~~~~~l~~~~~~g~i~v~~~~~~~ 306 (312)
+++|+|+++.|++++.||+|++|-..+..
T Consensus 1132 ~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1132 CSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp EEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999999999999999999876543
No 82
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.2e-38 Score=273.04 Aligned_cols=286 Identities=12% Similarity=0.139 Sum_probs=205.2
Q ss_pred cCcEEEEEEc---CCCCeEEEEecCCeEEEEeccCCce-------eee--EEecCCceeEE-------------------
Q 047355 17 SDRVKSVDFH---PTQPWVLASLYSGTVCIWNYHSQTT-------EKS--VKVTDSPVRTA------------------- 65 (312)
Q Consensus 17 ~~~i~~~~~~---~~~~~l~~~~~dg~v~iw~~~~~~~-------~~~--~~~~~~~v~~~------------------- 65 (312)
....+++.|. |++..+++++.|+.|++|+...... ... ...+..++..+
T Consensus 15 ~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (393)
T 4gq1_A 15 NVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNV 94 (393)
T ss_dssp TCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC--------
T ss_pred CCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcce
Confidence 3456777774 5566778888899999997632110 000 01112223332
Q ss_pred -EEeeCCcEEEEecCCCeEEEEEccCceee-----eeecccccceeEEEEec--------CCCEEEEEeCCCcEEEEeCC
Q 047355 66 -KFVAREHWIVCGSDDKFIRVFDYNTMASV-----KEFEAHEDYIRSLAVHP--------TFPFVLTASDDKLIKLWDWE 131 (312)
Q Consensus 66 -~~~~~~~~l~~g~~dg~i~iwd~~~~~~~-----~~~~~h~~~i~~~~~~~--------~~~~l~t~s~d~~v~iwd~~ 131 (312)
.+.+++.+|++|+.|++|++||.++.... ..+.+|.+.|++++|+| ++++|+++|.|++|++||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 23345667999999999999999877543 34679999999999998 77899999999999999987
Q ss_pred CCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceee-------------------------eccc
Q 047355 132 KNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT-------------------------LDAH 186 (312)
Q Consensus 132 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~-------------------------~~~~ 186 (312)
.. .....+..|...+..+.|+|.+..+|++++.|++|++||+++.+.... ..+|
T Consensus 175 ~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 175 DE-GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp TT-EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CC-ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 65 344556678889999999998777899999999999999987654321 1345
Q ss_pred ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeC--------------------CCcEE
Q 047355 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP--------------------ELRII 246 (312)
Q Consensus 187 ~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~--------------------~~~~l 246 (312)
...+.++.+ ..+++..+++++.|+.+++||+..++....+..|...+..+.+.| ++.++
T Consensus 254 ~~~v~~v~~-~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 254 ASSLANVRW-IGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp SSSCSEEEE-ETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred cccceeeee-ecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 566777775 357899999999999999999988777766666665555444333 34467
Q ss_pred EEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 247 ITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 247 ~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
++|+.||.|++||+.+++....+..+...|.+++|+|||++||+++++|.+.++...+
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~gf 390 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMGF 390 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEGGG
T ss_pred EEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeCc
Confidence 8889999999999999988888888889999999999999999999999998888764
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.5e-37 Score=266.96 Aligned_cols=248 Identities=20% Similarity=0.313 Sum_probs=214.6
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc-Cceee
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN-TMASV 94 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~ 94 (312)
|...|.+++|+|++++|++|+.||.|++||+.+.+....+..|...+.++.| +++.+++|+.||.|++||+. .....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence 6789999999999999999999999999999998888889899999999999 46799999999999999998 45667
Q ss_pred eeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe--CCCeEEEE
Q 047355 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS--LDGTIQIW 172 (312)
Q Consensus 95 ~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s--~dg~v~iw 172 (312)
..+.+|...|.+++|+|+++++++++.|+.|++||++.. .....+..|...+..+.|+|.+..++++++ .|+.|++|
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 788999999999999999999999999999999999865 556677889999999999997778888876 89999999
Q ss_pred EcCCCcceeeecccccceeEEEEEEcCCceEEEE--EeCCCeEEEEeCCCCeEEE--EecccccCeEEEEEeCCCcEEEE
Q 047355 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLIT--GSDDFTVKVWDYETKTCVQ--ILEGHTNNVTAVCFHPELRIIIT 248 (312)
Q Consensus 173 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s--g~~dg~i~vwd~~~~~~~~--~~~~h~~~i~~l~~~~~~~~l~s 248 (312)
|+++.+....+. +...+.++.+ ++++.++++ |+.||.|++||+.+++... .+.+|...|.+++|+|++++|++
T Consensus 290 d~~~~~~~~~~~-~~~~v~~~~~--s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 290 NAATGARVNTVD-AGSQVTSLIW--SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEE--CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred ECCCCCEEEEEe-CCCcEEEEEE--CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 999988877774 4567787764 678888888 5589999999998865544 46789999999999999999999
Q ss_pred EeCCCcEEEEeCCCcceeeec
Q 047355 249 ASEDGTILIWNATTFRLQNTL 269 (312)
Q Consensus 249 ~s~dg~v~iwd~~~~~~~~~~ 269 (312)
++.||.|++|++.+++.....
T Consensus 367 ~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 367 AASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ECTTSEEEEEECCC-------
T ss_pred EeCCCcEEEEECCCCcccccc
Confidence 999999999999987765543
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-37 Score=269.23 Aligned_cols=250 Identities=13% Similarity=0.172 Sum_probs=220.2
Q ss_pred hhhhhhcccCcEEEEEEcCC----C---CeEEEEecCCeEEEEeccCCce-----eeeEEec-----CCceeEEEEe---
Q 047355 9 IEKEFIQKSDRVKSVDFHPT----Q---PWVLASLYSGTVCIWNYHSQTT-----EKSVKVT-----DSPVRTAKFV--- 68 (312)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~----~---~~l~~~~~dg~v~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~--- 68 (312)
....+..|...|.+++|+|+ + ++|++++.||.|++|++...+. ...+..+ ...+.++.|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 45567789999999999999 9 9999999999999999987775 6677777 5899999999
Q ss_pred -eCCcE-EEEecCCCeEEEEEccC------ceeee-----ee-------cccccceeEEEEecCCCEEEEEeCCCcEEEE
Q 047355 69 -AREHW-IVCGSDDKFIRVFDYNT------MASVK-----EF-------EAHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128 (312)
Q Consensus 69 -~~~~~-l~~g~~dg~i~iwd~~~------~~~~~-----~~-------~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iw 128 (312)
++++. |++|+.||.|++||+.+ ...+. .+ ..|...|.+++|+|++ ++++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999988 66555 66 4488999999999999 99999999999999
Q ss_pred eCCCCceeeeEecC---C---ccceEEEEeCCCCCCEEEEEeCC---CeEEEEEcCCCcceeeecc-------------c
Q 047355 129 DWEKNWECTQTFEG---H---SHYVMQSAFNPKDLNTFASASLD---GTIQIWNMDSSAAKFTLDA-------------H 186 (312)
Q Consensus 129 d~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~~s~s~d---g~v~iwd~~~~~~~~~~~~-------------~ 186 (312)
|++.. .....+.. | ...+..+.|+|. +.++++++.| +.|++||+++.+....+.. |
T Consensus 213 d~~~~-~~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 213 ELSTL-RPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp ETTTT-EEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred ECCCC-ceeEEEeccccccccCCccceEEECCC-CCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 99865 55667777 8 899999999985 6899999999 9999999999988888888 9
Q ss_pred ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec------cc---------------ccCeEEEEEeCCC--
Q 047355 187 EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE------GH---------------TNNVTAVCFHPEL-- 243 (312)
Q Consensus 187 ~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h---------------~~~i~~l~~~~~~-- 243 (312)
...+.++.+ ++++.+|++++.||.|++||+++++++..+. +| ...|++++|+|++
T Consensus 291 ~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 291 SSWVMSLSF--NDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 368 (397)
T ss_dssp SSCEEEEEE--CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred CCcEEEEEE--CCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence 999998875 6788999999999999999999999999998 88 9999999999998
Q ss_pred --------cEEEEEeCCCcEEEEeCCCc
Q 047355 244 --------RIIITASEDGTILIWNATTF 263 (312)
Q Consensus 244 --------~~l~s~s~dg~v~iwd~~~~ 263 (312)
++|++++.||.|++|++.++
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999998765
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-38 Score=274.39 Aligned_cols=245 Identities=16% Similarity=0.180 Sum_probs=208.0
Q ss_pred eEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc--eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCC
Q 047355 54 SVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM--ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 131 (312)
Q Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~ 131 (312)
.+..+..+|.+++|++++++|++|+.|+.|++||+.+. +....+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 44556778999999999999999999999999999987 6778889999999999999999999999999999999987
Q ss_pred CCc--eeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCc---ceeeecc-cccceeEEEEEEcCCceEEE
Q 047355 132 KNW--ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA---AKFTLDA-HEKGINCIDYFITSDKVYLI 205 (312)
Q Consensus 132 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~l~ 205 (312)
... .....+..|...+..+.|+| ++..+++++.|++|++||+++.+ ....+.. |...+.++++ ++++.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~ 162 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW--HPNNVLLA 162 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE--CTTSSEEE
T ss_pred CCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE--cCCCCEEE
Confidence 653 24556778999999999998 56799999999999999999876 3566666 8999999885 67889999
Q ss_pred EEeCCCeEEEEeCC------------------CCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcce--
Q 047355 206 TGSDDFTVKVWDYE------------------TKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL-- 265 (312)
Q Consensus 206 sg~~dg~i~vwd~~------------------~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~-- 265 (312)
+|+.|+.|++||++ .++++..+ +|...|++++|+|++++|++++.|+.|++||+.+.+.
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 99999999999985 34566667 8999999999999999999999999999999999877
Q ss_pred --eeecccCccceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 266 --QNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 266 --~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
...+..|...|.+++|+|++++|+++++++.+.++..
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 7888889999999999999999999998888855443
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-37 Score=272.09 Aligned_cols=283 Identities=17% Similarity=0.211 Sum_probs=231.7
Q ss_pred cEEEEEEcCCCCeEE-EEecCCeEEEEeccCC----ceeeeEEecCCceeEEEEee-CCcEEEEecCCCeEEEEEccCc-
Q 047355 19 RVKSVDFHPTQPWVL-ASLYSGTVCIWNYHSQ----TTEKSVKVTDSPVRTAKFVA-REHWIVCGSDDKFIRVFDYNTM- 91 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~- 91 (312)
....++++|+...++ +++.||.|++|++... .....+..|..+|.+++|++ ++.+|++|+.||.|++||+.+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 344578888876554 5788999999998654 23345677889999999999 8999999999999999999887
Q ss_pred ------eeeeeecccccceeEEEEecCC-CEEEEEeCCCcEEEEeCCCCceeeeEe--cCCccceEEEEeCCCCCCEEEE
Q 047355 92 ------ASVKEFEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQTF--EGHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 92 ------~~~~~~~~h~~~i~~~~~~~~~-~~l~t~s~d~~v~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s 162 (312)
.....+.+|...|.+++|+|++ .++++++.|+.|++||+... .....+ ..|...+..+.|+| ++..+++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 193 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-AAVLTLGPDVHPDTIYSVDWSR-DGALICT 193 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-EEEEEECTTTCCSCEEEEEECT-TSSCEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-CccEEEecCCCCCceEEEEECC-CCCEEEE
Confidence 5677889999999999999998 69999999999999999876 555667 78999999999998 5689999
Q ss_pred EeCCCeEEEEEcCCCcceeee-cccccc-eeEEEEEEcCCceEEEEE---eCCCeEEEEeCCCCeE-EEEe-cccccCeE
Q 047355 163 ASLDGTIQIWNMDSSAAKFTL-DAHEKG-INCIDYFITSDKVYLITG---SDDFTVKVWDYETKTC-VQIL-EGHTNNVT 235 (312)
Q Consensus 163 ~s~dg~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~sg---~~dg~i~vwd~~~~~~-~~~~-~~h~~~i~ 235 (312)
++.|+.|++||+++.+....+ ..|... +..+.+ ++++.++++| +.|+.|++||+++.+. +... ..|...|.
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF--VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE--CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE--cCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 999999999999998888777 677765 666664 6789999999 7999999999987543 2222 24777899
Q ss_pred EEEEeCCCcEEE-EEeCCCcEEEEeCCCcce-eeeccc--CccceEEEEEecCCCeEEEEecCCeEEEEeccCCCC
Q 047355 236 AVCFHPELRIII-TASEDGTILIWNATTFRL-QNTLSS--GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSSGC 307 (312)
Q Consensus 236 ~l~~~~~~~~l~-s~s~dg~v~iwd~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~~~ 307 (312)
+++|+|++++|+ +|+.|+.|++||+.+.+. ...+.. +...+.+++|+|++..+++ .++.+++|......|
T Consensus 272 ~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 999999999886 555799999999998763 334433 4578999999999999875 556888777665443
No 87
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-36 Score=258.99 Aligned_cols=252 Identities=17% Similarity=0.236 Sum_probs=215.0
Q ss_pred eeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc----eeeeeecccccceeEEEEec--CCCEEEEEeCCCcEE
Q 047355 53 KSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM----ASVKEFEAHEDYIRSLAVHP--TFPFVLTASDDKLIK 126 (312)
Q Consensus 53 ~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~i~~~~~~~--~~~~l~t~s~d~~v~ 126 (312)
..+..|...|.+++|++++++|++|+.||.|++||+.+. .....+.+|..+|.+++|+| ++.+|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 345678899999999999999999999999999999875 45667789999999999999 589999999999999
Q ss_pred EEeCCCCc--------eeeeEecCCccceEEEEeCCCC-CCEEEEEeCCCeEEEEEcCCCcceeeec-------------
Q 047355 127 LWDWEKNW--------ECTQTFEGHSHYVMQSAFNPKD-LNTFASASLDGTIQIWNMDSSAAKFTLD------------- 184 (312)
Q Consensus 127 iwd~~~~~--------~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~s~dg~v~iwd~~~~~~~~~~~------------- 184 (312)
+||++... .....+..|...+..+.|+|.. ...+++++.|+.|++||+++.+....+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99987643 4456778899999999999852 5799999999999999998776543322
Q ss_pred ccccceeEEEEEEc-CCceEEEEEeCCCeEEEEeCCCCeE--EEEecccccCeEEEEEeCCC----cEEEEEeCCCcEEE
Q 047355 185 AHEKGINCIDYFIT-SDKVYLITGSDDFTVKVWDYETKTC--VQILEGHTNNVTAVCFHPEL----RIIITASEDGTILI 257 (312)
Q Consensus 185 ~~~~~v~~~~~~~~-~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~i~~l~~~~~~----~~l~s~s~dg~v~i 257 (312)
.|...+.++.+.+. .++.++++++.|+.+.+|+...++. +..+.+|...|++++|+|++ ++|++|+.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 56677888876432 1278999999999998888877654 67788999999999999998 89999999999999
Q ss_pred EeCCCc----------------------------------------------ceeeecccCccceEEEEEecCCCeEEEE
Q 047355 258 WNATTF----------------------------------------------RLQNTLSSGLERVWSIGYKKGSNQVAFG 291 (312)
Q Consensus 258 wd~~~~----------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 291 (312)
||+.+. +....+..|...|.+++|+|++++|+++
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 998764 5666777888999999999999999999
Q ss_pred ecCCeEEEEeccC
Q 047355 292 CDNGTLIVKIGNS 304 (312)
Q Consensus 292 ~~~g~i~v~~~~~ 304 (312)
+.||.|+||-.+.
T Consensus 325 ~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 325 GDDGKVRLWKATY 337 (351)
T ss_dssp ETTSCEEEEEECT
T ss_pred cCCCcEEEEecCc
Confidence 9999999997764
No 88
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.8e-36 Score=261.02 Aligned_cols=277 Identities=15% Similarity=0.189 Sum_probs=211.8
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEE-EEecCCCeEEEEEccC
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWI-VCGSDDKFIRVFDYNT 90 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~dg~i~iwd~~~ 90 (312)
++..|.+.|.+++|+|||++|++|+.++ +++|+.+..+...... ...+..+.+.++++.+ ++|+.|++|++||..+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 4567899999999999999999887765 7899988765443332 2357778888887777 5788889999999999
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEE--EeCCCe
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS--ASLDGT 168 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s--~s~dg~ 168 (312)
++.+..+. |..+|.++.++++. ++.+ .|+.+++||+.........+.. ......+++ ..++. ++.||.
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~---~~la~~sg~~~g~ 160 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN---GLLVYSNEFNLGQ 160 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET---TEEEEEESSCTTC
T ss_pred CcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc---cEEEEeCCCcCcE
Confidence 98888776 66789999998764 4433 4789999998765233333333 223344555 44554 689999
Q ss_pred EEEEEcCCCc---------------c-eeeecccccceeEEEEEEcCCceEEEEEeCCCe-EEEEeCCCCeEEEEec-c-
Q 047355 169 IQIWNMDSSA---------------A-KFTLDAHEKGINCIDYFITSDKVYLITGSDDFT-VKVWDYETKTCVQILE-G- 229 (312)
Q Consensus 169 v~iwd~~~~~---------------~-~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~-~- 229 (312)
|++||+++.. + ...+.+|...|.+++| ++++.+|++|+.|++ |++||+++++++..+. +
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~--s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL--NRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEE--CTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE--CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 9999998754 1 6778899999999985 789999999999998 9999999999999998 5
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcce--eeeccc---------------------CccceEEEEEecCCC
Q 047355 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL--QNTLSS---------------------GLERVWSIGYKKGSN 286 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~--~~~~~~---------------------~~~~v~~~~~~~~~~ 286 (312)
|...|++++|+|++++|++++.|++|++||+..... ...+.. .......++|+++++
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 999999999999999999999999999999976431 111111 111235689999999
Q ss_pred eEEEEecCCeEEEEecc
Q 047355 287 QVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 287 ~l~~~~~~g~i~v~~~~ 303 (312)
.|++++.||.++++.-.
T Consensus 319 ~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 319 LVVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEEEETTTTEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEE
Confidence 99999999999887644
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.4e-36 Score=286.45 Aligned_cols=288 Identities=18% Similarity=0.287 Sum_probs=244.1
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
+.+..|...|.+++|+|++++|++++.||.|++||+.+++....+..|...+.++.|++++++|++|+.||.|++||+++
T Consensus 49 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 45667899999999999999999999999999999999998888998999999999999999999999999999999988
Q ss_pred c-eeeeeecccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCC-CCCEEEEEeCCC
Q 047355 91 M-ASVKEFEAHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK-DLNTFASASLDG 167 (312)
Q Consensus 91 ~-~~~~~~~~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~s~s~dg 167 (312)
. .....+.+|..+|.+++|+| ++..+++++.||.|++||+............+...+..+.|+|. ++..+++++.||
T Consensus 129 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 208 (814)
T 3mkq_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (814)
T ss_dssp TSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS
T ss_pred CceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC
Confidence 6 67778889999999999999 78899999999999999987654433333344478888999883 457999999999
Q ss_pred eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCc--E
Q 047355 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR--I 245 (312)
Q Consensus 168 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~--~ 245 (312)
.|++||+++......+.+|...+.++.+ ++++.++++|+.||.|++||..+++.+..+..|...+.+++|+|+++ +
T Consensus 209 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 209 TIKIWDYQTKSCVATLEGHMSNVSFAVF--HPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNY 286 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEE--CSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceE
Confidence 9999999999888889999999998875 78889999999999999999999999999999999999999999987 3
Q ss_pred EEEEeCCCcEEEEeCCCcceeee-------------------------------------------cccCccceEEEEEe
Q 047355 246 IITASEDGTILIWNATTFRLQNT-------------------------------------------LSSGLERVWSIGYK 282 (312)
Q Consensus 246 l~s~s~dg~v~iwd~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~~ 282 (312)
+++++ |+.+.+|++........ +..+...+.+++|+
T Consensus 287 ~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 365 (814)
T 3mkq_A 287 IASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHS 365 (814)
T ss_dssp EEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEEC
T ss_pred EEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEEC
Confidence 55554 67788888654221111 11223346789999
Q ss_pred cCCCeEEEEecCCeEEEEec
Q 047355 283 KGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 283 ~~~~~l~~~~~~g~i~v~~~ 302 (312)
|+|+.|++++ +|.+.++-.
T Consensus 366 pdg~~la~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 366 PNGRFVTVVG-DGEYVIYTA 384 (814)
T ss_dssp TTSSEEEEEE-TTEEEEEET
T ss_pred CCCCEEEEec-CCEEEEEEC
Confidence 9999999888 788887753
No 90
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-36 Score=282.44 Aligned_cols=246 Identities=22% Similarity=0.432 Sum_probs=210.4
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
+.+.+|...|.+++|+|++++|++|+.||+|++||+.+++....+..|...|.+++|++++++|++|+.|++|++||...
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence 45778999999999999999999999999999999999888889999999999999999999999999999999999865
Q ss_pred ceeeee---ecccccceeEEEEecCC--CEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 91 MASVKE---FEAHEDYIRSLAVHPTF--PFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 91 ~~~~~~---~~~h~~~i~~~~~~~~~--~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
...... ..+|...|.+++|+|++ ..+++++.|+.|++||++.. .....+.+|...+..+.|+| ++.++++++.
T Consensus 504 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~ 581 (694)
T 3dm0_A 504 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSP-DGSLCASGGK 581 (694)
T ss_dssp CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEeC-CCCEEEEEeC
Confidence 433322 25788999999999986 57999999999999998765 55677889999999999998 4689999999
Q ss_pred CCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccc--------------
Q 047355 166 DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT-------------- 231 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-------------- 231 (312)
||+|++||+++.+....+..+ ..+.++++ ++++.++++++ ++.|++||+++++.+..+..+.
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~--sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEAN-SVIHALCF--SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAA 657 (694)
T ss_dssp TSBCEEEETTTTEEEECCBCS-SCEEEEEE--CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC-------------
T ss_pred CCeEEEEECCCCceEEEecCC-CcEEEEEE--cCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccccccccc
Confidence 999999999998877666543 45777764 67887776665 5679999999998877665321
Q ss_pred -----cCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 232 -----NNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 232 -----~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
-.+++++|+|++++|++|+.||.|++|++..
T Consensus 658 ~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 658 TKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp ---CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 1378999999999999999999999999864
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=261.44 Aligned_cols=246 Identities=20% Similarity=0.273 Sum_probs=209.4
Q ss_pred cccCcEEEEEEcCC---CCeEEEEecCCeEEEEeccCCc-eeeeEEecCCceeEEEE------eeCCcEEEEecCCCeEE
Q 047355 15 QKSDRVKSVDFHPT---QPWVLASLYSGTVCIWNYHSQT-TEKSVKVTDSPVRTAKF------VAREHWIVCGSDDKFIR 84 (312)
Q Consensus 15 ~~~~~i~~~~~~~~---~~~l~~~~~dg~v~iw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~g~~dg~i~ 84 (312)
+|.+.|.+++|+|+ +++|++++.||.|++||+...+ ....+..|...+.++.| ++++++|++|+.||.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 67889999999998 6999999999999999998877 77788889999999965 57899999999999999
Q ss_pred EEEccCce-eeeeeccccc----ceeEEE----EecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCC
Q 047355 85 VFDYNTMA-SVKEFEAHED----YIRSLA----VHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155 (312)
Q Consensus 85 iwd~~~~~-~~~~~~~h~~----~i~~~~----~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 155 (312)
+||+.+.. ....+..|.. .|.+++ ++|+++++++++.|+.|++||++.... .....|...+..+.|+|.
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCC
Confidence 99998876 6677766554 788888 678999999999999999999987633 334667889999999984
Q ss_pred --CCCEEEEEeCCCeEEEEEcCCCcceeeec-----ccccceeEEEEEEcCCce-EEEEEeCCCeEEEEeCCCC------
Q 047355 156 --DLNTFASASLDGTIQIWNMDSSAAKFTLD-----AHEKGINCIDYFITSDKV-YLITGSDDFTVKVWDYETK------ 221 (312)
Q Consensus 156 --~~~~~~s~s~dg~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~------ 221 (312)
+...+++++.||.|++||+++......+. +|...+.++.+ ++++. ++++|+.||.|++||++.+
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRH--LPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEE--ETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEE--CCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 45899999999999999998776554444 88899999885 57777 8999999999999998643
Q ss_pred -------------eEEEEecccccCeEEEEEeCCCcEEE-EEeCCCcEEEEeCCCcc
Q 047355 222 -------------TCVQILEGHTNNVTAVCFHPELRIII-TASEDGTILIWNATTFR 264 (312)
Q Consensus 222 -------------~~~~~~~~h~~~i~~l~~~~~~~~l~-s~s~dg~v~iwd~~~~~ 264 (312)
+.+..+.+|...|++++|+|++++|+ +++.|+.|++||+.+.+
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 46777889999999999999999998 89999999999998754
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-36 Score=257.11 Aligned_cols=252 Identities=15% Similarity=0.246 Sum_probs=222.7
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC-----CeEE
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD-----KFIR 84 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~ 84 (312)
...+.+|...|.+++|+|++++|++++.||.|++||+.+.+....+. +..++..+.|+++++++++++.+ +.|+
T Consensus 67 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~ 145 (369)
T 3zwl_B 67 LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSIN 145 (369)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEE
T ss_pred hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEE
Confidence 34566789999999999999999999999999999999888887777 77789999999999999999998 9999
Q ss_pred EEEccCce-----------eeeeeccccc--ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEE
Q 047355 85 VFDYNTMA-----------SVKEFEAHED--YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151 (312)
Q Consensus 85 iwd~~~~~-----------~~~~~~~h~~--~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~ 151 (312)
+||+.+.. ....+..|.. .+.+++|+|+++++++++.||.|++||+.........+..|...+..+.
T Consensus 146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 225 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQ 225 (369)
T ss_dssp EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEE
T ss_pred EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEE
Confidence 99987643 2334455665 8999999999999999999999999999875577788889999999999
Q ss_pred eCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCC--------------eEEEEe
Q 047355 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF--------------TVKVWD 217 (312)
Q Consensus 152 ~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg--------------~i~vwd 217 (312)
|+| ++..+++++.|+.|++||+++.+....+. +...+..+. +++++.++++++.++ .+++||
T Consensus 226 ~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 226 FSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAV--ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp ECT-TSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEE--ECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred ECC-CCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEE--ecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 998 56899999999999999999988777665 556677766 478899999999988 899999
Q ss_pred CCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCccee
Q 047355 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ 266 (312)
Q Consensus 218 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~ 266 (312)
..+++.+..+.+|...|++++|+|++++|++++.||.|++|++.+....
T Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 302 KIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred cCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 9999999999999999999999999999999999999999999875443
No 93
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.8e-36 Score=253.95 Aligned_cols=251 Identities=20% Similarity=0.328 Sum_probs=214.0
Q ss_pred ceeeeEEecCCceeEEEEeeC-CcEEEEecCCCeEEEEEccCce-----eeeeecccccceeEEEEecCCCEEEEEeCCC
Q 047355 50 TTEKSVKVTDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNTMA-----SVKEFEAHEDYIRSLAVHPTFPFVLTASDDK 123 (312)
Q Consensus 50 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~ 123 (312)
+...++++|.+.|++++|+|+ +++|++|+.|++|++||+.+.+ +.+.+.+|...|.+++|+|+++++++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 445578899999999999997 6899999999999999987543 4567889999999999999999999999999
Q ss_pred cEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc-eeeecccccceeEEEEEEcCCce
Q 047355 124 LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA-KFTLDAHEKGINCIDYFITSDKV 202 (312)
Q Consensus 124 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~ 202 (312)
.+++|+.... ........+...+....+.+. ...+++++.|+.+++||+..... .....+|...+.++.+...+...
T Consensus 109 ~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 109 TLRLWDLTTG-TTTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp EEEEEETTTT-EEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cceEEeeccc-ceeeeecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 9999998765 344455666677777788774 57899999999999999976544 34456788889988876666677
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEe
Q 047355 203 YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282 (312)
Q Consensus 203 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 282 (312)
++++++.|+.|++||++++++...+.+|.++|++++|+|++++|++|+.|+.|++||+.+.+.+..+..+ ..+.++.|+
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~ 265 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFS 265 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecC
Confidence 8999999999999999999999999999999999999999999999999999999999998887777644 678999999
Q ss_pred cCCCeEEEEecCCeEEEEeccC
Q 047355 283 KGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 283 ~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
|++. +++++.|+.|+||-.+.
T Consensus 266 ~~~~-~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 266 PNRY-WLCAATGPSIKIWDLEG 286 (340)
T ss_dssp SSSS-EEEEEETTEEEEEETTT
T ss_pred CCCc-eeeccCCCEEEEEECCC
Confidence 9865 55667799999986553
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7e-36 Score=263.86 Aligned_cols=283 Identities=20% Similarity=0.332 Sum_probs=235.4
Q ss_pred cEEEEEEcCCC----------CeEEEEec----CCeEEEEecc--------------------------CCce-eeeEEe
Q 047355 19 RVKSVDFHPTQ----------PWVLASLY----SGTVCIWNYH--------------------------SQTT-EKSVKV 57 (312)
Q Consensus 19 ~i~~~~~~~~~----------~~l~~~~~----dg~v~iw~~~--------------------------~~~~-~~~~~~ 57 (312)
+..++.|.|+. .++++|+. ...|.+.++. +.+. ......
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 126 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN 126 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence 56788888875 35777754 3457777543 0011 233456
Q ss_pred cCCceeEEEEeeC-CcEEEEecCCCeEEEEEccC----------ceeeeeecccccceeEEEEecCCC-EEEEEeCCCcE
Q 047355 58 TDSPVRTAKFVAR-EHWIVCGSDDKFIRVFDYNT----------MASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLI 125 (312)
Q Consensus 58 ~~~~v~~~~~~~~-~~~l~~g~~dg~i~iwd~~~----------~~~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v 125 (312)
|...|..++|+++ +.+|++++.||.|++|++.+ ......+.+|...|.+++|+|+++ +|++|+.||.|
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 7889999999997 67899999999999999986 567778889999999999999988 99999999999
Q ss_pred EEEeCCCCce------eeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC---cceeeecccccceeEEEEE
Q 047355 126 KLWDWEKNWE------CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS---AAKFTLDAHEKGINCIDYF 196 (312)
Q Consensus 126 ~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~ 196 (312)
++||+..... ....+.+|...+..+.|+|.+...|++++.|+.|++||+++. .....+..|...+.+++|
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~- 285 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF- 285 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEE-
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEe-
Confidence 9999876321 134567899999999999977889999999999999999986 466677789999999986
Q ss_pred EcCCce-EEEEEeCCCeEEEEeCCC-CeEEEEecccccCeEEEEEeCCCc-EEEEEeCCCcEEEEeCCC-----------
Q 047355 197 ITSDKV-YLITGSDDFTVKVWDYET-KTCVQILEGHTNNVTAVCFHPELR-IIITASEDGTILIWNATT----------- 262 (312)
Q Consensus 197 ~~~~~~-~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~s~dg~v~iwd~~~----------- 262 (312)
++++. ++++|+.||.|++||+++ ..++..+..|...|++++|+|+++ +|++++.|+.|++||+..
T Consensus 286 -~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 364 (430)
T 2xyi_A 286 -NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 364 (430)
T ss_dssp -CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHH
T ss_pred -CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccc
Confidence 55554 789999999999999987 567788889999999999999885 799999999999999976
Q ss_pred ---cceeeecccCccceEEEEEecCCC-eEEEEecCCeEEEEecc
Q 047355 263 ---FRLQNTLSSGLERVWSIGYKKGSN-QVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 263 ---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~v~~~~ 303 (312)
.++...+..|...|.+++|+|+++ +|++++.||.|+||-.+
T Consensus 365 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 365 DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp HCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 256667777888899999999999 89999999999999765
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-36 Score=264.37 Aligned_cols=270 Identities=14% Similarity=0.155 Sum_probs=222.3
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc---eeeeEEec------------------------------------
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT---TEKSVKVT------------------------------------ 58 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~---~~~~~~~~------------------------------------ 58 (312)
.++.+++|+|+|++|+ ++.++.|++||+.+++ ....+..+
T Consensus 5 ~p~~~v~~s~dg~~l~-~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVF-AIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEE-EEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEE-EEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 4688999999999555 4568899999998877 44443321
Q ss_pred ------------------CCceeEEEEeeCCcEE-EEecCCCeEEEEEcc--Cceeeeeec--ccccceeEEEEecCCCE
Q 047355 59 ------------------DSPVRTAKFVAREHWI-VCGSDDKFIRVFDYN--TMASVKEFE--AHEDYIRSLAVHPTFPF 115 (312)
Q Consensus 59 ------------------~~~v~~~~~~~~~~~l-~~g~~dg~i~iwd~~--~~~~~~~~~--~h~~~i~~~~~~~~~~~ 115 (312)
...|.+++|++++++| ++|+.||.|++||+. ++...+.+. .|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 2259999999999996 899999999999998 777777776 56688999999999999
Q ss_pred EEEEeCCCcEEEEeCCCCce---eeeEecCCccceEEEEeCCC--CCCEEEEEeCCCeEEEEEcCCCcceee-ecccccc
Q 047355 116 VLTASDDKLIKLWDWEKNWE---CTQTFEGHSHYVMQSAFNPK--DLNTFASASLDGTIQIWNMDSSAAKFT-LDAHEKG 189 (312)
Q Consensus 116 l~t~s~d~~v~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~--~~~~~~s~s~dg~v~iwd~~~~~~~~~-~~~~~~~ 189 (312)
|++++.|+.+++|++..... ....+.+|...+..+.|+|. ...++++++.|++|++||+++...... +.+|...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 99999999999999865422 22356789999999999985 157999999999999999998887766 5689999
Q ss_pred eeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc-------------------------ccCeEEEEEeCCCc
Q 047355 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH-------------------------TNNVTAVCFHPELR 244 (312)
Q Consensus 190 v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------------------------~~~i~~l~~~~~~~ 244 (312)
+.+++| + ++.+|++|+.|+.|++||+++++++..+..+ ...|.+++|+|+++
T Consensus 244 v~~~~~--s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 244 VSSICC--G-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp EEEEEE--C-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred eEEEEE--C-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 999986 4 8889999999999999999999988877633 34699999999999
Q ss_pred EEEEEe-CCCcEEEEeC--CCc---ceeeecccCccceEEEEEecCCCeEEEEe
Q 047355 245 IIITAS-EDGTILIWNA--TTF---RLQNTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 245 ~l~s~s-~dg~v~iwd~--~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
+|++++ .|+.|++|++ .+. +....+..+ ..+++++|+|++..++.++
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 999999 8999999999 444 566667666 8899999999644444333
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-35 Score=256.95 Aligned_cols=246 Identities=16% Similarity=0.189 Sum_probs=217.3
Q ss_pred EEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce--eeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 047355 55 VKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA--SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132 (312)
Q Consensus 55 ~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~ 132 (312)
+..+..+|.+++|++++++|++|+.|+.|++||+.+.+ ....+.+|...|.+++|+|+++++++++.|+.|++||+..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 44578899999999999999999999999999999887 7888999999999999999999999999999999999866
Q ss_pred Cce-eeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc----eeeecccccceeEEEEEEcCCceEEEEE
Q 047355 133 NWE-CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA----KFTLDAHEKGINCIDYFITSDKVYLITG 207 (312)
Q Consensus 133 ~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~sg 207 (312)
... ....+..|...+..+.|+|. +..+++++.|+.|++||++.... ......|...+.++.+ ++++.++++|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~ 160 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW--HPNSVLLAAG 160 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE--CTTSSEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE--cCCCCEEEEE
Confidence 532 23344678889999999985 58999999999999999988763 2333667888998875 6788999999
Q ss_pred eCCCeEEEEeC------------------CCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeec
Q 047355 208 SDDFTVKVWDY------------------ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTL 269 (312)
Q Consensus 208 ~~dg~i~vwd~------------------~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 269 (312)
+.||.|++||+ ..++.+..+.+|...|++++|+|++++|++++.|+.|++||+.+++....+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 99999999995 367888889999999999999999999999999999999999999999999
Q ss_pred ccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 270 SSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
..+...+.+++|+|+++.|+++ .||.+++|-.+.
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9998999999999999988888 899999887655
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-37 Score=288.31 Aligned_cols=251 Identities=14% Similarity=0.248 Sum_probs=215.3
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEecc--CCceeeeEEecCCceeEEEEeeC--CcEEEEecCCCeEEE
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYH--SQTTEKSVKVTDSPVRTAKFVAR--EHWIVCGSDDKFIRV 85 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~dg~i~i 85 (312)
...+.+|.+.|++++|+|++++|++|+.||+|++||+. +.+....+..|..+|.++.|+++ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 35678999999999999999999999999999999997 44556677788999999999987 899999999999999
Q ss_pred EEccCce--eeeeecccccceeEEEEecC--CCEEEEEeCCCcEEEEeCCCCc-eeeeEecCCccceEEEEeCCC-----
Q 047355 86 FDYNTMA--SVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIKLWDWEKNW-ECTQTFEGHSHYVMQSAFNPK----- 155 (312)
Q Consensus 86 wd~~~~~--~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~----- 155 (312)
||+.++. ....+..|...|.+++|+|+ +.++++|+.||.|++||+.... .....+.+|...+..+.|+|.
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 9999876 67778899999999999999 9999999999999999987652 234566789999999999995
Q ss_pred -------CCCEEEEEeCCCeEEEEEcCCC----cceeeecccccceeEEEEEEcCC---ceEEEEEeCCCeEEEEeCCCC
Q 047355 156 -------DLNTFASASLDGTIQIWNMDSS----AAKFTLDAHEKGINCIDYFITSD---KVYLITGSDDFTVKVWDYETK 221 (312)
Q Consensus 156 -------~~~~~~s~s~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~---~~~l~sg~~dg~i~vwd~~~~ 221 (312)
++..+++++.||+|++||+++. .....+.+|...+.++.+ +|+ +.++++|+.||.|++||+.++
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~--sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW--SPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE--CCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe--ccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 4689999999999999999876 344567789999999885 677 899999999999999999875
Q ss_pred e-----EEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 222 T-----CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 222 ~-----~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
. .......|...|++++|+|+++++++|+.||.|++|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 3 2333455888999999999999999999999999999874
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-37 Score=272.00 Aligned_cols=272 Identities=13% Similarity=0.216 Sum_probs=218.6
Q ss_pred EEcCCCCeEEEEecCCeEEEEeccCCceeeeE-EecCCceeEEEEee-CCcEEEEecCCCeEEEEEccC---ce---eee
Q 047355 24 DFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV-KVTDSPVRTAKFVA-REHWIVCGSDDKFIRVFDYNT---MA---SVK 95 (312)
Q Consensus 24 ~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~g~~dg~i~iwd~~~---~~---~~~ 95 (312)
.|+|+++.++++. .|+.. ++.+..+ ..|..+|.+++|++ ++++|++|+.||+|++||+.+ .. ...
T Consensus 34 ~f~~~~~~~~~~~------~w~~~-g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 106 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR-GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL 106 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC-CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE
T ss_pred hcCCccccccccc------ccccc-ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee
Confidence 4678888777665 48744 4566677 77889999999999 999999999999999999876 32 222
Q ss_pred eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCC--CceeeeEecC------------CccceEEEE--eCCCCCCE
Q 047355 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK--NWECTQTFEG------------HSHYVMQSA--FNPKDLNT 159 (312)
Q Consensus 96 ~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~--~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~ 159 (312)
.+ .|...|.+++|+|++++|++++.||.|++||+.. .......... +...+..+. ++| +...
T Consensus 107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 184 (437)
T 3gre_A 107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSL 184 (437)
T ss_dssp EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEE
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCE
Confidence 22 5899999999999999999999999999999841 1112221111 334444444 334 4679
Q ss_pred EEEEeCCCeEEEEEcCCCcceeeecc--cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec-ccccCeEE
Q 047355 160 FASASLDGTIQIWNMDSSAAKFTLDA--HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-GHTNNVTA 236 (312)
Q Consensus 160 ~~s~s~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~i~~ 236 (312)
+++++.|+.|++||+++.+....+.. |...+.++++ ++++.++++|+.||.|++||+++++++..+. .|..+|++
T Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICI--DEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITH 262 (437)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEE--CTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEE--CCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEE
Confidence 99999999999999999998888887 8889998885 7889999999999999999999999998876 78889999
Q ss_pred EEEe----CCCcEEEEEeCCCcEEEEeCCCcceeeeccc--------------------------CccceEEEEEecCCC
Q 047355 237 VCFH----PELRIIITASEDGTILIWNATTFRLQNTLSS--------------------------GLERVWSIGYKKGSN 286 (312)
Q Consensus 237 l~~~----~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~ 286 (312)
++|+ |++.+|++|+.||.|++||+.+++....+.. +...|++++|+ +++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 9665 4678999999999999999998876555543 44568899999 779
Q ss_pred eEEEEecCCeEEEEeccCCCC
Q 047355 287 QVAFGCDNGTLIVKIGNSSGC 307 (312)
Q Consensus 287 ~l~~~~~~g~i~v~~~~~~~~ 307 (312)
.|++|+.||.|++|-.+...+
T Consensus 342 ~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEEGGGTEEEEEETTCGGG
T ss_pred EEEecCCCCeEEEEECCCccc
Confidence 999999999999998765443
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-37 Score=261.76 Aligned_cols=267 Identities=12% Similarity=0.126 Sum_probs=210.4
Q ss_pred EEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc---------Cceee
Q 047355 24 DFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN---------TMASV 94 (312)
Q Consensus 24 ~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~---------~~~~~ 94 (312)
.+.+++.++++|+.||+|++||+.+++....+. ...+..+.|+++ +++|+.|++|++|+.. +.+.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344678899999999999999999888777665 345777778877 9999999999999765 33333
Q ss_pred eeec-ccccceeEEEEec--CCCEEEEEeCCCcEEEEeCCCCceeeeEe-cCCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 95 KEFE-AHEDYIRSLAVHP--TFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 95 ~~~~-~h~~~i~~~~~~~--~~~~l~t~s~d~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
+.+. .|.++|.+++++| +++++++++.|+.|++||++.... .... ..+...+..+.|+| ++.++++|+.||.|+
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILD 195 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEE
Confidence 3333 6778999999999 999999999999999999987643 3333 34555788999998 568999999999999
Q ss_pred EEEcCCCcce-eeecc-cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc---cccCeE--EEEEeCCC
Q 047355 171 IWNMDSSAAK-FTLDA-HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG---HTNNVT--AVCFHPEL 243 (312)
Q Consensus 171 iwd~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~i~--~l~~~~~~ 243 (312)
+||+++.+.. ..+.. |..+|.+++| ++++.+|++++. +.|++||+++.+....+.. |...+. +++|+|++
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~f--s~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKF--ADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEE--CTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEE--eCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 9999998877 67777 9999999885 788999999994 5999999998766544443 444444 69999999
Q ss_pred cEEEEEeC-CCcEEEEeCCCcceeeecccCccceEEEEEec---CCCeEEEEecCCeEEEEeccC
Q 047355 244 RIIITASE-DGTILIWNATTFRLQNTLSSGLERVWSIGYKK---GSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 244 ~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~g~i~v~~~~~ 304 (312)
++|++++. |+.|++|++.+....... ..+..+.|++ +++.|++++.||.+.+.+...
T Consensus 273 ~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred CEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 99999998 999999998654432222 5677889998 999999999999999887543
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-36 Score=262.43 Aligned_cols=243 Identities=13% Similarity=0.143 Sum_probs=192.4
Q ss_pred hhcccCcEEEEEEcCCCCeEEEE-----------ecCCeEEEEeccCCceeee-EE--------ecCCceeEEEEeeCCc
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLAS-----------LYSGTVCIWNYHSQTTEKS-VK--------VTDSPVRTAKFVAREH 72 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~-----------~~dg~v~iw~~~~~~~~~~-~~--------~~~~~v~~~~~~~~~~ 72 (312)
+..+.+.|.+++++ ++.+++| +.|+++|+|++........ .. .++..++.++|+||++
T Consensus 69 l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~ 146 (365)
T 4h5i_A 69 LEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT 146 (365)
T ss_dssp CCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS
T ss_pred ccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC
Confidence 45667778887764 4556655 4578899999865432211 11 1234578899999999
Q ss_pred EEEE--ecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee-eeEecCCccceEE
Q 047355 73 WIVC--GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC-TQTFEGHSHYVMQ 149 (312)
Q Consensus 73 ~l~~--g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~-~~~~~~~~~~v~~ 149 (312)
++++ ++.|++|++||+++.+....++ |...|.+++|+|+++++++++.++ +++|+....... ......|...+..
T Consensus 147 ~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 147 VAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp CEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEE
Confidence 8764 5579999999999998887775 778899999999999999998665 555554444332 3345678889999
Q ss_pred EEeCCCCCCEEEEEeCCC----eEEEEEcCCCcc----eeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCC
Q 047355 150 SAFNPKDLNTFASASLDG----TIQIWNMDSSAA----KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK 221 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~dg----~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 221 (312)
+.|+|. +..+++++.|+ .+++|++..... ...+.+|..+|.+++| +|++.+||+|+.|+.|++||++++
T Consensus 225 v~fspd-g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~--Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 225 INFIAD-DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV--DMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEET-TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE--CTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEcCC-CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE--CCCCCceEEEcCCCEEEEEECCCC
Confidence 999985 57888888887 688899876543 3456788889998875 789999999999999999999999
Q ss_pred eEEEEe-cccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 222 TCVQIL-EGHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 222 ~~~~~~-~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
+++..+ .+|...|++++|+||+++||+||.|++|||||++.
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 998874 79999999999999999999999999999999964
No 101
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-37 Score=275.48 Aligned_cols=229 Identities=14% Similarity=0.117 Sum_probs=190.0
Q ss_pred EEEEecCCCeEEEEEccCceee----eeecccccceeEEEEecC------CCEEEEEeCCCcEEEEeCCCCce-------
Q 047355 73 WIVCGSDDKFIRVFDYNTMASV----KEFEAHEDYIRSLAVHPT------FPFVLTASDDKLIKLWDWEKNWE------- 135 (312)
Q Consensus 73 ~l~~g~~dg~i~iwd~~~~~~~----~~~~~h~~~i~~~~~~~~------~~~l~t~s~d~~v~iwd~~~~~~------- 135 (312)
.+++++.|++|++|++.+.+.. ..+..|.+.|.+++|+|+ +.+|++++.||+|++||+.....
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 3444668899999999776532 345677889999999996 57999999999999999865421
Q ss_pred ---eeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC-cceeeecccccceeEEEEEEcCCc-eEEEEEeCC
Q 047355 136 ---CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS-AAKFTLDAHEKGINCIDYFITSDK-VYLITGSDD 210 (312)
Q Consensus 136 ---~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-~~l~sg~~d 210 (312)
+...+.+|...+.++.|+|. ..|++|+.||+|++||+++. .+...+.+|...|.++++..++++ .+|++|+.|
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred ecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 12367789999999999974 58999999999999999865 345568899999999965557777 899999999
Q ss_pred CeEEEEeCCCCeEEEEeccccc--CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeE
Q 047355 211 FTVKVWDYETKTCVQILEGHTN--NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQV 288 (312)
Q Consensus 211 g~i~vwd~~~~~~~~~~~~h~~--~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 288 (312)
++|++||++++++...+.+|.. .|.+++|+|+++.+++++.|++|++||+++++...++.+|...|++|+|+|+++.|
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV 412 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeE
Confidence 9999999998777666667753 58899999999999999999999999999988888888999999999999999999
Q ss_pred EEEecCCeEEEEecc
Q 047355 289 AFGCDNGTLIVKIGN 303 (312)
Q Consensus 289 ~~~~~~g~i~v~~~~ 303 (312)
++|+.||+|++|-..
T Consensus 413 ~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 413 LAGSADGSLIITNAA 427 (524)
T ss_dssp EEEETTTEEECCBSC
T ss_pred EEEECCCEEEEEech
Confidence 999999999988643
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.5e-36 Score=264.03 Aligned_cols=250 Identities=20% Similarity=0.364 Sum_probs=217.6
Q ss_pred hhhcccCcEEEEEEcCC-CCeEEEEecCCeEEEEeccC----------CceeeeEEecCCceeEEEEeeCCc-EEEEecC
Q 047355 12 EFIQKSDRVKSVDFHPT-QPWVLASLYSGTVCIWNYHS----------QTTEKSVKVTDSPVRTAKFVAREH-WIVCGSD 79 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~ 79 (312)
....|.+.|++++|+|+ +.+|++++.||.|++|++.. ......+..|...+.++.|++++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 45678899999999998 67899999999999999976 456677888999999999999988 9999999
Q ss_pred CCeEEEEEccCce-------eeeeecccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCc--eeeeEecCCccceEE
Q 047355 80 DKFIRVFDYNTMA-------SVKEFEAHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNW--ECTQTFEGHSHYVMQ 149 (312)
Q Consensus 80 dg~i~iwd~~~~~-------~~~~~~~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~--~~~~~~~~~~~~v~~ 149 (312)
||.|++|++.+.. ....+..|...|.+++|+| ++.++++++.|+.|++||++... .....+..|...+..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEE
Confidence 9999999998732 1456678999999999999 67788999999999999998652 455667789999999
Q ss_pred EEeCCCCCCEEEEEeCCCeEEEEEcCC-CcceeeecccccceeEEEEEEcCCc-eEEEEEeCCCeEEEEeCCC-------
Q 047355 150 SAFNPKDLNTFASASLDGTIQIWNMDS-SAAKFTLDAHEKGINCIDYFITSDK-VYLITGSDDFTVKVWDYET------- 220 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~------- 220 (312)
+.|+|.+..++++++.||+|++||+++ ......+..|...+.++.| ++++ .++++++.|+.|++||+..
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~--sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW--SPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE--CSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE--CCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 999997767899999999999999998 5567788889999999886 5555 5799999999999999976
Q ss_pred -------CeEEEEecccccCeEEEEEeCCCc-EEEEEeCCCcEEEEeCCCc
Q 047355 221 -------KTCVQILEGHTNNVTAVCFHPELR-IIITASEDGTILIWNATTF 263 (312)
Q Consensus 221 -------~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~s~dg~v~iwd~~~~ 263 (312)
.+.+..+.+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 367788889999999999999998 8999999999999998753
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-35 Score=247.36 Aligned_cols=246 Identities=22% Similarity=0.276 Sum_probs=213.9
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCC---ceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEE
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQ---TTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFD 87 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd 87 (312)
..+..|...|.+++|+|++++|++++.||.|++|++... +....+..+..++.++.| +++.+++++.||.|++||
T Consensus 53 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 53 TVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred EEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc
Confidence 345577899999999999999999999999999998653 445667778889999988 577999999999999999
Q ss_pred ccCceeeeeecccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeeeEecC-CccceEEEEeCCCCCCEEEEEeC
Q 047355 88 YNTMASVKEFEAHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNWECTQTFEG-HSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 88 ~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
.......+..|..+|.++.+.| ++.++++++.|+.+++||.. .....+.. |...+..+.|+|.+ . +++++.
T Consensus 131 --~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~ 203 (313)
T 3odt_A 131 --EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDG-H-FISCSN 203 (313)
T ss_dssp --TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETT-E-EEEEET
T ss_pred --CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCC-e-EEEccC
Confidence 5667788889999999999988 88999999999999999943 44555665 88899999999854 3 999999
Q ss_pred CCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcE
Q 047355 166 DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 245 (312)
|+.|++||+++.+....+..|...+.++.+ ++++ .+++++.||.|++||++++++...+..|...|++++|+|+++
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~--~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~- 279 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHESFVYCIKL--LPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD- 279 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE--CTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-
T ss_pred CCeEEEEECCchhhhhhhhcCCceEEEEEE--ecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-
Confidence 999999999999999999999999998875 6677 588999999999999999999999999999999999999998
Q ss_pred EEEEeCCCcEEEEeCCCcceeeec
Q 047355 246 IITASEDGTILIWNATTFRLQNTL 269 (312)
Q Consensus 246 l~s~s~dg~v~iwd~~~~~~~~~~ 269 (312)
+++++.||.|++||+.+.+.....
T Consensus 280 ~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 280 IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp EEEEETTSCEEEEESCGGGCCC--
T ss_pred EEEEeCCCcEEEEeCCCCceeehh
Confidence 667999999999999987665443
No 104
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-36 Score=262.52 Aligned_cols=245 Identities=16% Similarity=0.202 Sum_probs=220.1
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCc---------------eeEEEEeeCCcEEE
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP---------------VRTAKFVAREHWIV 75 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~ 75 (312)
..+..|...|.+++|+|++++|++++.||.|++||+.+.+....+..+... +..+.|.+++ .++
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 221 (425)
T 1r5m_A 143 NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFV 221 (425)
T ss_dssp EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEE
T ss_pred eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEE
Confidence 446678899999999999999999999999999999988888777766665 8889999875 588
Q ss_pred EecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCC
Q 047355 76 CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPK 155 (312)
Q Consensus 76 ~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 155 (312)
+++.||.|++||+.+.+....+..|...|.+++|+|+++++++++.|+.|++||+... .....+..|...+..+.|+|.
T Consensus 222 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp EECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-SCSEEECCCSSCEEEEEEETT
T ss_pred EEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-ccceEecCCCccEEEEEECCC
Confidence 8999999999999998888889999999999999999999999999999999998764 456677889999999999985
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe-------------
Q 047355 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT------------- 222 (312)
Q Consensus 156 ~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------------- 222 (312)
+ .+++++.|+.|++||+++.+....+..|...+.++.+ ++++.++++++.||.|++||+.+++
T Consensus 301 ~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 376 (425)
T 1r5m_A 301 D--KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRI--SQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGI 376 (425)
T ss_dssp T--EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEE--CTTSSEEEEEETTSCEEEEECHHHHC------------
T ss_pred C--EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEE--cCCCCEEEEEECCCeEEEEECCCCccceeeeecccccc
Confidence 4 9999999999999999999888888899899998875 7889999999999999999998877
Q ss_pred -------EEEEeccccc--CeEEEEEeCCCcEEEEEeCCCcEEEEeCC
Q 047355 223 -------CVQILEGHTN--NVTAVCFHPELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 223 -------~~~~~~~h~~--~i~~l~~~~~~~~l~s~s~dg~v~iwd~~ 261 (312)
++..+.+|.. .|++++|+|++++|++++.||.|++||++
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 377 LNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp --CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 8889999976 99999999999999999999999999985
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-35 Score=246.10 Aligned_cols=246 Identities=21% Similarity=0.327 Sum_probs=205.5
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc-
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM- 91 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~- 91 (312)
+.+|...|.+++|+|++++|++|+.||+|++|++++++....+..|...+.. +..++..+++|+.++.+++|+....
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS--LSWNSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE--EEEETTEEEEEETTSEEEEEETTSSS
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEE--eecCCCEEEEEecCCceEeeecCCCc
Confidence 4467789999999999999999999999999999999988888888877655 4556789999999999999998765
Q ss_pred eeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce---eeeEecCCccceEEEEeCCCCCCEE--EEEeCC
Q 047355 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE---CTQTFEGHSHYVMQSAFNPKDLNTF--ASASLD 166 (312)
Q Consensus 92 ~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~--~s~s~d 166 (312)
.....+.+|...+..+.+++.++++++++.|+.|++||++.... .......+...+..+.+.|.+...+ ++++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 45667889999999999999999999999999999999875422 2344566778889999998776655 456788
Q ss_pred CeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEE--EeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCc
Q 047355 167 GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLIT--GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR 244 (312)
Q Consensus 167 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s--g~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~ 244 (312)
++|++||.+........ .+...+..+.+. +++..+++ |+.|+.|++||+++++++..+.+|.+.|++++|+|+++
T Consensus 221 ~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~--~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAV-DAHSQVCSILWS--PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGA 297 (318)
T ss_dssp CEEEEEETTTCCEEEEE-ECSSCEEEEEEE--TTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CEEEEEecccccccccc-cceeeeeeeeec--ccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 99999999887665443 445566766654 44444444 45899999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCc
Q 047355 245 IIITASEDGTILIWNATTF 263 (312)
Q Consensus 245 ~l~s~s~dg~v~iwd~~~~ 263 (312)
+|+||+.||+|+|||+.+.
T Consensus 298 ~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 298 TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEETTTEEEEECCSCC
T ss_pred EEEEEecCCeEEEEECCCC
Confidence 9999999999999998653
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=268.00 Aligned_cols=259 Identities=10% Similarity=0.116 Sum_probs=212.3
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
.+.|.+++|+|||+++|+++.|++|+ |.... +.+..|...+..++|+|++ .++.+.+|+.+. ...
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~---~~~ 79 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQ---NGL 79 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCS---SCS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCC---ceE
Confidence 37899999999999999999999999 64443 3446788899999999998 455555555432 222
Q ss_pred ec-ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc-----ceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 97 FE-AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH-----YVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 97 ~~-~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
+. .|...|.+++|+|+|+.|++++.||.|++||... ....+. |.. .+.+++|+| ++.++++|+.||+|+
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVk 154 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQ 154 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEE
Confidence 32 5688999999999999999999999999999543 445555 554 489999999 568999999999999
Q ss_pred EEEcCCCcc-------eeee----cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeE---EEEe-cccccCeE
Q 047355 171 IWNMDSSAA-------KFTL----DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC---VQIL-EGHTNNVT 235 (312)
Q Consensus 171 iwd~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~---~~~~-~~h~~~i~ 235 (312)
+||+.++.. ..++ .+|...|.+++| +|++ +++++.|+.|++||+.+++. .+.+ .+|...|.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVaw--SPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVW--YEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEE--ETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEE--cCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEE
Confidence 999988753 3454 667789999986 5777 88899999999999987662 3556 47889999
Q ss_pred EEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEE--ecCCCeEEEEecCCeEEEEecc
Q 047355 236 AVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGY--KKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 236 ~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
+++|+ ++.||+++ +++|++||+.+.+......+|...++.++| +|+++.|++++.+|+ +||..+
T Consensus 231 svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 231 DLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999 58899997 699999999987774444379999999999 999999999999999 988865
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=255.78 Aligned_cols=280 Identities=16% Similarity=0.260 Sum_probs=205.6
Q ss_pred cccCcEEEEEEcC-CCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeC---CcEEEEecCCCeEEEEEccC
Q 047355 15 QKSDRVKSVDFHP-TQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR---EHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 15 ~~~~~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~g~~dg~i~iwd~~~ 90 (312)
+|...|.+++|+| ++.++++++.||.|++||+.+.+....+. +...+..+.+.+. +.++++|+.|+.|++||+.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 5889999999999 77899999999999999999887776665 5667888999884 45999999999999999999
Q ss_pred ceeeeeecccccceeEEEEecCCC-EEEEEeCCCcEEEEeCCCCceeeeEe---------------cCCccceEEEEeCC
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTF---------------EGHSHYVMQSAFNP 154 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~~~~~~~~~~~---------------~~~~~~v~~~~~~~ 154 (312)
.+....+..|...|.+++|+|+++ ++++++.||.|++||++........+ ..|...+..+.|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 988899999999999999999998 58899999999999997654444433 56888999999998
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcceeeecccc-----cceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc
Q 047355 155 KDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE-----KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG 229 (312)
Q Consensus 155 ~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 229 (312)
++..+++++.|+.|++||+++.+.......+. .... .... ...+..++.++.++.|++||+.+++++..+.+
T Consensus 256 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 332 (408)
T 4a11_B 256 -DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLK-FTVS-CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG 332 (408)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCC-CEEC-CSSSSCEEEEEETTEEEEEETTTCCEEEEECC
T ss_pred -CCCEEEEecCCCeEEEEECCCCccceeccccccccccccce-eEEe-cCCCceEEEEecCCEEEEEECcCCcceeeecc
Confidence 56899999999999999999876654433221 1111 1111 22344567778899999999999999999999
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEec-CCCeEEEEecCCeEEEEe
Q 047355 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~v~~ 301 (312)
|...|++++|+|++++|++++.||.|++||+.+.+.+........ ...+.+ .....+++.+++.+.+|-
T Consensus 333 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 333 HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----------------------------------------
T ss_pred CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecC
Confidence 999999999999999999999999999999998877654433221 122333 344555667788888873
No 108
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.8e-35 Score=254.36 Aligned_cols=251 Identities=16% Similarity=0.224 Sum_probs=210.4
Q ss_pred ccCCceeeeEEecCCceeEEEEeeCC-cEEEEecCCCeEEEEEccCceeeeeec--ccccceeEEEEec-CCCEEEEEeC
Q 047355 46 YHSQTTEKSVKVTDSPVRTAKFVARE-HWIVCGSDDKFIRVFDYNTMASVKEFE--AHEDYIRSLAVHP-TFPFVLTASD 121 (312)
Q Consensus 46 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~i~~~~~~~-~~~~l~t~s~ 121 (312)
+...+....+..|...|.+++|++++ ++|++|+.||.|++||+.+.+....+. +|...|.+++|+| ++.++++++.
T Consensus 60 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 60 LKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp HTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred ccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 34445556777888999999999998 999999999999999999877666654 6999999999999 6789999999
Q ss_pred CCcEEEEeCCCCceeeeEec---CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEc
Q 047355 122 DKLIKLWDWEKNWECTQTFE---GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFIT 198 (312)
Q Consensus 122 d~~v~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 198 (312)
|+.|++||+.. .....+. .|...+..+.|+|. ...+++++.|+.|++||+ ..+....+.+|...+.++++ +
T Consensus 140 d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~--~ 213 (383)
T 3ei3_B 140 RGATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEF--N 213 (383)
T ss_dssp TTEEEEEETTS--CEEEEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEE--C
T ss_pred CCEEEEEECCC--CceEEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEE--C
Confidence 99999999985 3333443 34478999999984 589999999999999999 46677788899999999885 5
Q ss_pred CCce-EEEEEeCCCeEEEEeCCC----CeEEEEecccccCeEEEEEeC-CCcEEEEEeCCCcEEEEeCCCcceeeecccC
Q 047355 199 SDKV-YLITGSDDFTVKVWDYET----KTCVQILEGHTNNVTAVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 199 ~~~~-~l~sg~~dg~i~vwd~~~----~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
+++. ++++|+.|+.|++||+++ +.++..+ +|...|++++|+| ++++|++++.|+.|++||+.+++....+..+
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 6777 899999999999999987 6677766 6999999999999 9999999999999999999987766555533
Q ss_pred c-----------------cceEEEEEecCCCeEEEEecCCeEEEEeccCC
Q 047355 273 L-----------------ERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 273 ~-----------------~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
. ..+..++|+|+++. +++.||+|+||-.++.
T Consensus 293 ~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~ 340 (383)
T 3ei3_B 293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSG 340 (383)
T ss_dssp CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTC
T ss_pred cccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCC
Confidence 2 34556888888877 8889999999976543
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.7e-35 Score=258.87 Aligned_cols=240 Identities=23% Similarity=0.431 Sum_probs=209.7
Q ss_pred hhhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 10 EKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
.+.+.+|.+.|.+++| ++++|++|+.||+|++||+.+++....+..|...+.++.|. +..+++|+.||.|++||+.
T Consensus 166 ~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~ 241 (435)
T 1p22_A 166 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMA 241 (435)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECS
T ss_pred EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCC
Confidence 3456789999999999 78899999999999999999999888898899999999986 4689999999999999998
Q ss_pred Cceee---eeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC
Q 047355 90 TMASV---KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD 166 (312)
Q Consensus 90 ~~~~~---~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d 166 (312)
+.... ..+.+|...|.++++ +++++++|+.||.|++||++.. .....+.+|...+..+.++ +..+++++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~---~~~l~~g~~d 315 (435)
T 1p22_A 242 SPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC-EFVRTLNGHKRGIACLQYR---DRLVVSGSSD 315 (435)
T ss_dssp SSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEE---TTEEEEEETT
T ss_pred CCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC-cEEEEEcCCCCcEEEEEeC---CCEEEEEeCC
Confidence 77654 677899999999998 6789999999999999998865 5667788999999999885 3789999999
Q ss_pred CeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe---------EEEEecccccCeEEE
Q 047355 167 GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT---------CVQILEGHTNNVTAV 237 (312)
Q Consensus 167 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~---------~~~~~~~h~~~i~~l 237 (312)
|+|++||+++++....+.+|...+.++.+ ++.++++|+.||.|++||+++++ ++..+.+|.+.|+++
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEC----CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred CeEEEEECCCCCEEEEEeCCcCcEEEEEe----cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEE
Confidence 99999999999999999999999998875 67889999999999999986554 788899999999999
Q ss_pred EEeCCCcEEEEEeCCCcEEEEeCCCcce
Q 047355 238 CFHPELRIIITASEDGTILIWNATTFRL 265 (312)
Q Consensus 238 ~~~~~~~~l~s~s~dg~v~iwd~~~~~~ 265 (312)
+| ++++|++|+.||.|++||+.+...
T Consensus 392 ~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 392 QF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp EE--CSSCEEECCSSSEEEEEC------
T ss_pred Ee--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 99 678899999999999999987544
No 110
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-35 Score=260.91 Aligned_cols=252 Identities=17% Similarity=0.267 Sum_probs=195.6
Q ss_pred hhhcccCcEEEEEEcC-CCCeEEEEecCCeEEEEeccCCceeeeEEec--CCceeEEEEeeCCcEEEEecCCCeEEEEEc
Q 047355 12 EFIQKSDRVKSVDFHP-TQPWVLASLYSGTVCIWNYHSQTTEKSVKVT--DSPVRTAKFVAREHWIVCGSDDKFIRVFDY 88 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 88 (312)
.+.+|.+.|.+|+|+| ++.+|++|+.||+|++||+++.........+ ...+.++.|++++.+|++|+.||.|++||+
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 4568999999999998 6889999999999999999765433322222 235778999999999999999999999998
Q ss_pred cCceeeeeecccccceeEEEEecCCC-EEEEEeCCCcEEEEeCCCCce--eeeEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 89 NTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWE--CTQTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 89 ~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
+. +.+..+.+|...|.+++|+|+++ ++++++.|+.|++||++.... ......+|...|..+.|+| ++.+|++++.
T Consensus 239 ~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~ 316 (435)
T 4e54_B 239 DG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQ 316 (435)
T ss_dssp SS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEES
T ss_pred Cc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcC
Confidence 75 45678889999999999999876 678999999999999875422 2223457889999999998 5689999999
Q ss_pred CCeEEEEEcCCCcceeeecccccc----eeEEEEEEcCCceEEEEEe------------CCCeEEEEeCCCCeEEEEe-c
Q 047355 166 DGTIQIWNMDSSAAKFTLDAHEKG----INCIDYFITSDKVYLITGS------------DDFTVKVWDYETKTCVQIL-E 228 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~sg~------------~dg~i~vwd~~~~~~~~~~-~ 228 (312)
|++|++||+++......+..|... +..+.....+++.++++++ .++.|++||..+++.+..+ .
T Consensus 317 D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~ 396 (435)
T 4e54_B 317 KSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD 396 (435)
T ss_dssp SSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC
T ss_pred CCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC
Confidence 999999999988777666555421 1122222344555555443 3467999999999888776 4
Q ss_pred ccccCeEEE-EEeCCCcEEEEEeCCCcEEEEeCCCccee
Q 047355 229 GHTNNVTAV-CFHPELRIIITASEDGTILIWNATTFRLQ 266 (312)
Q Consensus 229 ~h~~~i~~l-~~~~~~~~l~s~s~dg~v~iwd~~~~~~~ 266 (312)
+|...|.++ +|+|++++|++|+ |+.|+||++++++..
T Consensus 397 ~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 397 PESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp SSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 688889887 6999999999876 889999999887653
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-35 Score=275.82 Aligned_cols=252 Identities=19% Similarity=0.307 Sum_probs=214.9
Q ss_pred eeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc--CceeeeeecccccceeEEEEecC--CCEEEEEeCCCcEEEE
Q 047355 53 KSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN--TMASVKEFEAHEDYIRSLAVHPT--FPFVLTASDDKLIKLW 128 (312)
Q Consensus 53 ~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~h~~~i~~~~~~~~--~~~l~t~s~d~~v~iw 128 (312)
..+..|.++|.+++|++++++|++|+.||.|++||+. +......+.+|.++|.+++|+|+ ++++++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 3567889999999999999999999999999999998 55677788999999999999987 8999999999999999
Q ss_pred eCCCCc-eeeeEecCCccceEEEEeCCCC-CCEEEEEeCCCeEEEEEcCCC--cceeeecccccceeEEEEEEcC-----
Q 047355 129 DWEKNW-ECTQTFEGHSHYVMQSAFNPKD-LNTFASASLDGTIQIWNMDSS--AAKFTLDAHEKGINCIDYFITS----- 199 (312)
Q Consensus 129 d~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~~~~s~s~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~----- 199 (312)
|+.... .....+.+|...+..+.|+|.. +..+++++.||+|++||+++. .....+.+|...+.++.+.+..
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 987653 2556778899999999999853 689999999999999999876 3445667888899998864321
Q ss_pred ------CceEEEEEeCCCeEEEEeCCCC----eEEEEecccccCeEEEEEeCC---CcEEEEEeCCCcEEEEeCCCcc--
Q 047355 200 ------DKVYLITGSDDFTVKVWDYETK----TCVQILEGHTNNVTAVCFHPE---LRIIITASEDGTILIWNATTFR-- 264 (312)
Q Consensus 200 ------~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~i~~l~~~~~---~~~l~s~s~dg~v~iwd~~~~~-- 264 (312)
++.++++|+.||.|++||++++ .+...+.+|...|++++|+|+ ++++++|+.||.|++||+.+.+
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 5789999999999999999766 567788899999999999999 8999999999999999998753
Q ss_pred ---eeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 265 ---LQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 265 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
.......+...|++++|+|+++.|++++.||.|+||-.+.
T Consensus 243 ~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred ceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 3334445778899999999999999999999999987663
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-35 Score=258.23 Aligned_cols=260 Identities=12% Similarity=0.163 Sum_probs=207.7
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
.+.+|...|++++|+|+| .++.+.+|+.+..... .+ .+...|.+++|+|+|.+|++++.||.|++||.++
T Consensus 47 ~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~-~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~- 116 (588)
T 2j04_A 47 DINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLL-NS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK- 116 (588)
T ss_dssp CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSS-TT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-
T ss_pred eecCCCccEEEEEECCCC-------CcceEEEEeCCCceEe-ec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-
Confidence 346899999999999999 5666666665433222 22 2377899999999999999999999999999654
Q ss_pred eeeeeeccccc-----ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce------eeeEe----cCCccceEEEEeCCCC
Q 047355 92 ASVKEFEAHED-----YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE------CTQTF----EGHSHYVMQSAFNPKD 156 (312)
Q Consensus 92 ~~~~~~~~h~~-----~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~------~~~~~----~~~~~~v~~~~~~~~~ 156 (312)
.+..+. |.. .|.+++|+|++++|++|+.||+|++||+..... ....+ .+|...|.+++|+|.
T Consensus 117 -~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd- 193 (588)
T 2j04_A 117 -MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED- 193 (588)
T ss_dssp -EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-
T ss_pred -eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC-
Confidence 556666 665 499999999999999999999999999886531 24554 678889999999985
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcce---eee-cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccccc
Q 047355 157 LNTFASASLDGTIQIWNMDSSAAK---FTL-DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTN 232 (312)
Q Consensus 157 ~~~~~s~s~dg~v~iwd~~~~~~~---~~~-~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 232 (312)
+ +++++.|++|++||+...... .++ .+|...|..++|. +.++|+++ +++|++||..+++......+|.+
T Consensus 194 g--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs----g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~ 266 (588)
T 2j04_A 194 V--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV----DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLE 266 (588)
T ss_dssp E--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE----TTEEEEEC-SSEEEEEETTTTEEEEEECSCCS
T ss_pred c--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE----CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCc
Confidence 3 889999999999999887642 345 4788889999875 36788887 69999999998877454448999
Q ss_pred CeEEEEE--eCCCcEEEEEeCCCcEEEEeCCCcc-----------------------eeeecccCccceEEEEEecCCCe
Q 047355 233 NVTAVCF--HPELRIIITASEDGTILIWNATTFR-----------------------LQNTLSSGLERVWSIGYKKGSNQ 287 (312)
Q Consensus 233 ~i~~l~~--~~~~~~l~s~s~dg~v~iwd~~~~~-----------------------~~~~~~~~~~~v~~~~~~~~~~~ 287 (312)
.|..++| +|++..++++++||+ ++|...... ....+++ ...|++++|+|||+.
T Consensus 267 ~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~ 344 (588)
T 2j04_A 267 NFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYS 344 (588)
T ss_dssp CCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSE
T ss_pred eEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCE
Confidence 9999999 999999999999999 999863211 1122222 345899999999999
Q ss_pred EEEEec
Q 047355 288 VAFGCD 293 (312)
Q Consensus 288 l~~~~~ 293 (312)
+|++++
T Consensus 345 lA~~~~ 350 (588)
T 2j04_A 345 IAIVYD 350 (588)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=255.00 Aligned_cols=243 Identities=17% Similarity=0.262 Sum_probs=201.5
Q ss_pred cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce-----------eeeeecccc------------cceeEEEEecCC-
Q 047355 58 TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA-----------SVKEFEAHE------------DYIRSLAVHPTF- 113 (312)
Q Consensus 58 ~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~i~~~~~~~~~- 113 (312)
+...|.+++|++++++|++|+.||.|++||+.+.. ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 45789999999999999999999999999998766 467888998 889999999998
Q ss_pred -CEEEEEeCCCcEEEEeCCCCcee--------------------------------------eeE-ecCCccceEEEEeC
Q 047355 114 -PFVLTASDDKLIKLWDWEKNWEC--------------------------------------TQT-FEGHSHYVMQSAFN 153 (312)
Q Consensus 114 -~~l~t~s~d~~v~iwd~~~~~~~--------------------------------------~~~-~~~~~~~v~~~~~~ 153 (312)
.++++++.|+.|++||+...... ... ..+|...|..+.|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 78999999999999997542110 112 36799999999999
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCc-cee-------eecccccceeEEEEEEcCCc-eEEEEEeCCCeEEEEeCCCCeE-
Q 047355 154 PKDLNTFASASLDGTIQIWNMDSSA-AKF-------TLDAHEKGINCIDYFITSDK-VYLITGSDDFTVKVWDYETKTC- 223 (312)
Q Consensus 154 ~~~~~~~~s~s~dg~v~iwd~~~~~-~~~-------~~~~~~~~v~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~- 223 (312)
| ++..++++ .|++|++||+++.. ... .+.+|...+.+++| +|++ .++++|+.||.|++||+++++.
T Consensus 187 ~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 187 S-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEF--HPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp T-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEE--CSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred C-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEE--CCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 9 46788888 79999999998433 332 35688888999885 6776 8999999999999999998876
Q ss_pred ---EEEeccccc------------CeEEEEEeCCCcEEEEEeCCCcEEEEeCCC-cceeeecccCccc------------
Q 047355 224 ---VQILEGHTN------------NVTAVCFHPELRIIITASEDGTILIWNATT-FRLQNTLSSGLER------------ 275 (312)
Q Consensus 224 ---~~~~~~h~~------------~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~~~~~~------------ 275 (312)
...+.+|.. .|++++|+|++++|++++. +.|++||+.+ .+....+..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 677888876 8999999999999999999 9999999987 7777777766421
Q ss_pred ---eEEEEEecCCCeEEEEecCCeEEEEeccCC
Q 047355 276 ---VWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 276 ---v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
+..++|+|++++|++|+.||.|+||-.+..
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 334999999999999999999999977644
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=9.3e-34 Score=242.01 Aligned_cols=241 Identities=13% Similarity=0.077 Sum_probs=207.5
Q ss_pred EecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce---eeeeecccccceeEEEEecCCC-EEEEEeCCCcEEEEeC-
Q 047355 56 KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA---SVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDW- 130 (312)
Q Consensus 56 ~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~- 130 (312)
..|...|.+++|++++++|++|+.|+.|++|++.+.. ....+..|...|.+++|+|+++ ++++++.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 3577899999999999999999999999999998766 3455668999999999999999 9999999999999998
Q ss_pred CCCceeeeEecC--CccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCC---------CcceeeecccccceeEEEEEEcC
Q 047355 131 EKNWECTQTFEG--HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS---------SAAKFTLDAHEKGINCIDYFITS 199 (312)
Q Consensus 131 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~~~ 199 (312)
.... ...+.+ |...+..+.|+| ...+++++.|+.|++||+++ .+....+. |...+.++++ ++
T Consensus 88 ~~~~--~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--~~ 160 (342)
T 1yfq_A 88 GSPS--FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDT--NS 160 (342)
T ss_dssp SSSS--EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEE--CS
T ss_pred cCCc--eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEe--cC
Confidence 6542 356777 999999999998 58999999999999999987 65555555 7788888875 45
Q ss_pred CceEEEEEeCCCeEEEEeCCC-Ce--EEEEecccccCeEEEEEeC-CCcEEEEEeCCCcEEEEeCCCc------ceeeec
Q 047355 200 DKVYLITGSDDFTVKVWDYET-KT--CVQILEGHTNNVTAVCFHP-ELRIIITASEDGTILIWNATTF------RLQNTL 269 (312)
Q Consensus 200 ~~~~l~sg~~dg~i~vwd~~~-~~--~~~~~~~h~~~i~~l~~~~-~~~~l~s~s~dg~v~iwd~~~~------~~~~~~ 269 (312)
++ +++++.|+.|++||+++ +. .......|...|++++|+| +++++++++.||.|++|++... +....+
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 55 89999999999999987 43 3344556888999999999 9999999999999999999876 667777
Q ss_pred ccCcc---------ceEEEEEecCCCeEEEEecCCeEEEEeccCC
Q 047355 270 SSGLE---------RVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 270 ~~~~~---------~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
..+.. .+.+++|+|+++.|++++.||.|++|-.++.
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 77755 8999999999999999999999999976643
No 115
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-34 Score=252.62 Aligned_cols=249 Identities=12% Similarity=0.177 Sum_probs=206.9
Q ss_pred hhhhcccCcEEEEEEcC-CCCeEEEEecCCeEEEEeccCC-------ceeeeEEecCCceeEEEEeeCC-cEEEEecCCC
Q 047355 11 KEFIQKSDRVKSVDFHP-TQPWVLASLYSGTVCIWNYHSQ-------TTEKSVKVTDSPVRTAKFVARE-HWIVCGSDDK 81 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~dg 81 (312)
..+.+|.+.|.+++|+| ++++|++|+.||+|++||+... +....+..|...|.+++|++++ ..|++|+.||
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 45678999999999999 8999999999999999999876 5567788899999999999997 6999999999
Q ss_pred eEEEEEccCceeeeee--cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEe-cCCccc-eEEEEeCCCCC
Q 047355 82 FIRVFDYNTMASVKEF--EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF-EGHSHY-VMQSAFNPKDL 157 (312)
Q Consensus 82 ~i~iwd~~~~~~~~~~--~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~ 157 (312)
.|++||+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||++.. .....+ ..|... +..+.|+|. +
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 232 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG-TVVAEKDRPHEGTRPVHAVFVSE-G 232 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-EEEEEEECSSCSSSCCEEEECST-T
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC-ceeeeeccCCCCCcceEEEEcCC-C
Confidence 9999999999988888 889999999999999999999999999999999876 445555 677665 788999984 5
Q ss_pred CEEEEE---eCCCeEEEEEcCCCcc-eeee-cccccceeEEEEEEcCCceEEE-EEeCCCeEEEEeCCCCeE-EEEecc-
Q 047355 158 NTFASA---SLDGTIQIWNMDSSAA-KFTL-DAHEKGINCIDYFITSDKVYLI-TGSDDFTVKVWDYETKTC-VQILEG- 229 (312)
Q Consensus 158 ~~~~s~---s~dg~v~iwd~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~-~~~~~~- 229 (312)
.+++++ +.|+.|++||+++... .... ..|...+.++.+ ++++.+++ +|+.|+.|++||+.+++. +..+..
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF--DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE--ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE--cCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 788888 7899999999988654 2222 245666777764 67777775 566899999999988763 444443
Q ss_pred -cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcce
Q 047355 230 -HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL 265 (312)
Q Consensus 230 -h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~ 265 (312)
|...|++++|+|++.++++ .++.+++|++.+.+.
T Consensus 311 ~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp CCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 4589999999999988764 567999999877543
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.1e-34 Score=253.22 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=180.0
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceee-----eEEecCCceeEEEEee--------CCcEEEEecCCCeEEE
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEK-----SVKVTDSPVRTAKFVA--------REHWIVCGSDDKFIRV 85 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~l~~g~~dg~i~i 85 (312)
.+....+.+++.+|++++.|++|++||.+..+... .+.+|...|.+++|+| ++++|++|+.|++|++
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 33444455567789999999999999998765432 3456889999999997 7889999999999999
Q ss_pred EEccCceeeeeecccccceeEEEEecCCC-EEEEEeCCCcEEEEeCCCCceee------------------------eEe
Q 047355 86 FDYNTMASVKEFEAHEDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECT------------------------QTF 140 (312)
Q Consensus 86 wd~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~~~~~~~~------------------------~~~ 140 (312)
||+.+......+..|..+|.+++|+|++. +|++++.|++|++||++...... ...
T Consensus 171 Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 171 WRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred EECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 99998888888889999999999999875 79999999999999987542211 012
Q ss_pred cCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeE------------------EEEEEcCCce
Q 047355 141 EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINC------------------IDYFITSDKV 202 (312)
Q Consensus 141 ~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~------------------~~~~~~~~~~ 202 (312)
.+|...+..+.|.+.++..+++++.|+++++||+...+....+..|...+.. ..+.+..++.
T Consensus 251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY 330 (393)
T ss_dssp -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTE
T ss_pred ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCE
Confidence 3566777888887667889999999999999999876655544444332221 1233345677
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC
Q 047355 203 YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 203 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~ 261 (312)
++++|+.||.|++||+.+++....+.+|..+|++++|+|++++||+++.+| +.+|.+.
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 889999999999999999888888888999999999999999999999766 5556543
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-32 Score=242.19 Aligned_cols=279 Identities=13% Similarity=0.097 Sum_probs=228.4
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeee-----EEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKS-----VKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
...+.+++|+|++..+++++.|+.|++||+.+++.... +..+...+..++|.+++..+++++.|+.|++||+++.
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 34567899999777788888899999999998777653 3356678999999999999999999999999999998
Q ss_pred eeeeeecccccceeEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe------
Q 047355 92 ASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS------ 164 (312)
Q Consensus 92 ~~~~~~~~h~~~i~~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s------ 164 (312)
+....+..|...+.+++|+|+++.++ +++.|+.|++||+... .....+..+ ..+..+.|+|. +..+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~-~~~~~~~~~~~-g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK-LEIRKTDKI-GLPRGLLLSKD-GKELYIAQFSASNQ 278 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEECCCC-SEEEEEEECTT-SSEEEEEEEESCTT
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-cEEEEecCC-CCceEEEEcCC-CCEEEEEECCCCcc
Confidence 88888889999999999999999875 5558999999998765 444444443 45788999985 46777776
Q ss_pred --CCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCce-EEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeC
Q 047355 165 --LDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKV-YLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHP 241 (312)
Q Consensus 165 --~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~ 241 (312)
.|+.|++||+++.+....+ .|...+..+.+ ++++. ++++++.|+.|++||+.+++....+. +...+.+++|+|
T Consensus 279 ~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~--~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~ 354 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVS--GNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSP 354 (433)
T ss_dssp CSCCEEEEEEETTTTEEEEEE-EEEECEEEEEE--CSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECT
T ss_pred ccCCCeEEEEECCCCcEEeec-cCCCCcceEEE--CCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcC
Confidence 5889999999987665544 44456666654 67774 56777899999999999998888776 677899999999
Q ss_pred CCcEEEEEeC---------------CCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEec-CCeEEEEecc
Q 047355 242 ELRIIITASE---------------DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCD-NGTLIVKIGN 303 (312)
Q Consensus 242 ~~~~l~s~s~---------------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~v~~~~ 303 (312)
+++++++++. ||.|++||..+++....+.. ...+.+++|+|+++.|++++. ++.+++|-.+
T Consensus 355 dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 355 DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 9998888877 57999999999888777765 457899999999999998875 9999998654
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.6e-31 Score=229.65 Aligned_cols=266 Identities=15% Similarity=0.133 Sum_probs=216.4
Q ss_pred CeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEE-EEecCCCeEEEEEccCceeeeeecccccceeEEE
Q 047355 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWI-VCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLA 108 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~ 108 (312)
..+++++.|+.|++||+.+++....+..+. .+.+++|++++++| ++++.|+.|++||+.+++....+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 356778899999999999888887777665 57899999999977 677799999999999998888877665 899999
Q ss_pred EecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc
Q 047355 109 VHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE 187 (312)
Q Consensus 109 ~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~ 187 (312)
|+|++++++ +++.++.|++||+... +....+..+ ..+..+.|+|.+..++++++.|+.|++||+++.+....+..+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~-~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSN-TVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCC-eEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 999999875 5557799999998865 344444444 4578899998654455788889999999999888777766554
Q ss_pred cceeEEEEEEcCCceEE-EEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEe---CCCcEEEEeCCCc
Q 047355 188 KGINCIDYFITSDKVYL-ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITAS---EDGTILIWNATTF 263 (312)
Q Consensus 188 ~~v~~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s---~dg~v~iwd~~~~ 263 (312)
.+..+. +++++.++ ++++.++.|++||+++++....+. +...+.+++|+|+++++++++ .++.|++||+.++
T Consensus 159 -~~~~~~--~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 159 -SPKGIA--VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp -SEEEEE--ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred -CcceEE--ECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 345554 57788766 678889999999999998887776 556799999999999998888 6899999999998
Q ss_pred ceeeecccCccceEEEEEecCCCeE-EEEecCCeEEEEeccC
Q 047355 264 RLQNTLSSGLERVWSIGYKKGSNQV-AFGCDNGTLIVKIGNS 304 (312)
Q Consensus 264 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~v~~~~~ 304 (312)
+....+..+. .+.+++|+|+++.| ++++.++++++|-..+
T Consensus 235 ~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 235 KITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred eEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 8877776654 57899999999988 5668899999986653
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.2e-32 Score=233.13 Aligned_cols=246 Identities=11% Similarity=0.146 Sum_probs=182.9
Q ss_pred EEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEE-EEEeC
Q 047355 43 IWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFV-LTASD 121 (312)
Q Consensus 43 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l-~t~s~ 121 (312)
||++.....+.....|..+|.+++|++++++|++|+.++ +++|++++........ ...+..+++.+..+.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECC
Confidence 456666666666678889999999999999999998875 7899998876544332 2357888888888877 57788
Q ss_pred CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC-cceeeecccccceeEEEEEEcCC
Q 047355 122 DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS-AAKFTLDAHEKGINCIDYFITSD 200 (312)
Q Consensus 122 d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 200 (312)
|+.|++||..+. .....+. +...+..+.+++. .++++ .|+.|++||+.+. +....+.. .....+ +++
T Consensus 80 d~~v~iWd~~~~-~~~~~~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~--~s~- 147 (355)
T 3vu4_A 80 KEVVHIWDDVKK-QDVSRIK-VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCE--FSN- 147 (355)
T ss_dssp TTEEEEEETTTT-EEEEEEE-CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEE--EET-
T ss_pred ccEEEEEECCCC-cEEEEEE-CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEE--EEc-
Confidence 899999998766 4445554 5568899999863 34444 4889999999987 55555444 222222 233
Q ss_pred ceEEEE-EeCCCeEEEEeCCCCe---------------E-EEEecccccCeEEEEEeCCCcEEEEEeCCCc-EEEEeCCC
Q 047355 201 KVYLIT-GSDDFTVKVWDYETKT---------------C-VQILEGHTNNVTAVCFHPELRIIITASEDGT-ILIWNATT 262 (312)
Q Consensus 201 ~~~l~s-g~~dg~i~vwd~~~~~---------------~-~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~-v~iwd~~~ 262 (312)
..++++ |+.||.|++||+.++. + +..+.+|.++|++++|+|++++||+|+.|++ |++||+.+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 333333 7899999999998764 2 6778999999999999999999999999998 99999999
Q ss_pred cceeeecc-c-CccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 263 FRLQNTLS-S-GLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 263 ~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
++.+.++. + |...|.+++|+|++++|++++.||+++||-.+
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 99999887 4 88999999999999999999999999999765
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6.7e-32 Score=225.25 Aligned_cols=276 Identities=13% Similarity=0.161 Sum_probs=196.6
Q ss_pred cEEEEEEcCCC--CeEEEEecCCeEEEEeccCC---ceeeeEEecCCceeEEEEeeCCcEEEEec-CC---CeEEEEEcc
Q 047355 19 RVKSVDFHPTQ--PWVLASLYSGTVCIWNYHSQ---TTEKSVKVTDSPVRTAKFVAREHWIVCGS-DD---KFIRVFDYN 89 (312)
Q Consensus 19 ~i~~~~~~~~~--~~l~~~~~dg~v~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d---g~i~iwd~~ 89 (312)
.+.++-|-..+ ...+.++...+|++|+.... +...++..++.+|..+.+.|+...|++.. .+ +.|+..-..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 67777776433 23445556689999999887 77888999999999999998654333322 11 122222111
Q ss_pred Cc----eeeeeecccccceeEEEEecCCCEEEEEe--CCCcEEEEeCCCCceeeeEecCCccceEEEEeCC--CCCCEEE
Q 047355 90 TM----ASVKEFEAHEDYIRSLAVHPTFPFVLTAS--DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP--KDLNTFA 161 (312)
Q Consensus 90 ~~----~~~~~~~~h~~~i~~~~~~~~~~~l~t~s--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~ 161 (312)
.. .......+|...|..+ ++++++.+++ .|+.|++|++....+....+..|...+..+.|+| .+..+++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 11 1112223455555554 5666666644 5999999999665556666677777777777776 3568999
Q ss_pred EEeCCCeEEEEEcCCCcceeeeccccc---ceeEEEEEEcCCceEE------------EEEeCCCeEEEEeCCCCeEEEE
Q 047355 162 SASLDGTIQIWNMDSSAAKFTLDAHEK---GINCIDYFITSDKVYL------------ITGSDDFTVKVWDYETKTCVQI 226 (312)
Q Consensus 162 s~s~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l------------~sg~~dg~i~vwd~~~~~~~~~ 226 (312)
+++.|++|++||+++++.+.++.+|.. .+.+++| +|++.++ ++|+.|++|++||..+++.+..
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf--SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v 275 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY--SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGV 275 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE--EETTEEEEEEC------------CCEEEEEEETTTTEEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE--CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEE
Confidence 999999999999999999998876543 3445554 5567765 6788999999999999988776
Q ss_pred e-----cccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceE-EEEEecCCCeEEEEecCCeEEEE
Q 047355 227 L-----EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVW-SIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 227 ~-----~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
+ .+|...+.+..++ +.++|+|+.|++|+|||+.+++...++.+|...+. +++|+|||++|++|+.|++|+||
T Consensus 276 ~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklW 353 (356)
T 2w18_A 276 MLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVY 353 (356)
T ss_dssp EEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred EEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 5 4777665544444 78999999999999999999999999998877666 58999999999999999999998
Q ss_pred e
Q 047355 301 I 301 (312)
Q Consensus 301 ~ 301 (312)
-
T Consensus 354 d 354 (356)
T 2w18_A 354 H 354 (356)
T ss_dssp E
T ss_pred c
Confidence 4
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=238.17 Aligned_cols=242 Identities=13% Similarity=0.151 Sum_probs=199.3
Q ss_pred cccCcEEEEEEcCCCCeE-EEEecCCeEEEEecc--CCceeeeEE--ecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 15 QKSDRVKSVDFHPTQPWV-LASLYSGTVCIWNYH--SQTTEKSVK--VTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l-~~~~~dg~v~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
.|.+.|.+++|+|++++| ++++.||.|++||+. .++....+. .+...+.+++|++++++|++|+.+|.+++|++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 455689999999999996 788899999999998 777777765 456789999999999999999999999999998
Q ss_pred Cceeee----eecccccceeEEEEecC---CCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEE
Q 047355 90 TMASVK----EFEAHEDYIRSLAVHPT---FPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 90 ~~~~~~----~~~~h~~~i~~~~~~~~---~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 162 (312)
+..... .+.+|...|.+++|+|+ +++|++++.|+.|++||+.........+.+|...+..+.|+ ++.++++
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s 257 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDYLLLS 257 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--STTEEEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--CCCEEEE
Confidence 776544 77889999999999999 89999999999999999986643333366899999999999 6689999
Q ss_pred EeCCCeEEEEEcCCCcceeeeccc-------------------------ccceeEEEEEEcCCceEEEEEe-CCCeEEEE
Q 047355 163 ASLDGTIQIWNMDSSAAKFTLDAH-------------------------EKGINCIDYFITSDKVYLITGS-DDFTVKVW 216 (312)
Q Consensus 163 ~s~dg~v~iwd~~~~~~~~~~~~~-------------------------~~~v~~~~~~~~~~~~~l~sg~-~dg~i~vw 216 (312)
++.|++|++||+++++....+..+ ...+..+. ..+++.++++++ .|+.|++|
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~--~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII--KSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE--ECSSSSEEEEEETTCSEEEEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE--EeCCCCEEEEEECCCCeEEEE
Confidence 999999999999998877666532 23455554 467888999998 89999999
Q ss_pred eC--CCC---eEEEEecccccCeEEEEEeCCCcEEEEEeC------CCcEEEEeCC
Q 047355 217 DY--ETK---TCVQILEGHTNNVTAVCFHPELRIIITASE------DGTILIWNAT 261 (312)
Q Consensus 217 d~--~~~---~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~------dg~v~iwd~~ 261 (312)
++ .++ +.+..+..| ..|.+++|+|++.++++++. +..|.+|.+.
T Consensus 336 ~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 336 EMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 99 555 677778888 78999999996443433332 5568888654
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=234.97 Aligned_cols=227 Identities=9% Similarity=0.058 Sum_probs=183.7
Q ss_pred eeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc--------eeeeE
Q 047355 68 VAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW--------ECTQT 139 (312)
Q Consensus 68 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~--------~~~~~ 139 (312)
..++..+++|+.||.|++||+.+++.+..+. ...|.++.++|. +++++.|+++++|+..... .....
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 3567889999999999999999988777765 567888888887 8999999999999865321 11222
Q ss_pred -ecCCccceEEEEeCCC-CCCEEEEEeCCCeEEEEEcCCCcceeeec-ccccceeEEEEEEcCCceEEEEEeCCCeEEEE
Q 047355 140 -FEGHSHYVMQSAFNPK-DLNTFASASLDGTIQIWNMDSSAAKFTLD-AHEKGINCIDYFITSDKVYLITGSDDFTVKVW 216 (312)
Q Consensus 140 -~~~~~~~v~~~~~~~~-~~~~~~s~s~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vw 216 (312)
..+|...+..+.|+|. ++.++++++.||+|++||+++.+...... .+...+.++++ +|++.++++|+.||.|++|
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~--~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVL--HKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEE--CTTSCEEEEECTTSCEEEE
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEE--CCCCCEEEEEcCCCEEEEE
Confidence 2356678999999982 34799999999999999999888765553 34456888774 7899999999999999999
Q ss_pred eCCCCeEE-EEecc-cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeeccc---Cccce--EEEEEecCCCeEE
Q 047355 217 DYETKTCV-QILEG-HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS---GLERV--WSIGYKKGSNQVA 289 (312)
Q Consensus 217 d~~~~~~~-~~~~~-h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~---~~~~v--~~~~~~~~~~~l~ 289 (312)
|+++++.. ..+.. |.++|++++|+|++.+|++++ |+.|++||+++.+....+.. +...+ .+++|+|++++|+
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 99998877 77887 999999999999999999999 55999999998876655543 22223 4699999999999
Q ss_pred EEec-CCeEEEEec
Q 047355 290 FGCD-NGTLIVKIG 302 (312)
Q Consensus 290 ~~~~-~g~i~v~~~ 302 (312)
+++. ++.++||-.
T Consensus 277 ~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 277 AYSNESNSLTIYKF 290 (343)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EecCCCCcEEEEEE
Confidence 9998 999999854
No 123
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=231.00 Aligned_cols=244 Identities=19% Similarity=0.277 Sum_probs=197.9
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEE--eeCCcEEEEecCCCeEEEEEc
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKF--VAREHWIVCGSDDKFIRVFDY 88 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~g~~dg~i~iwd~ 88 (312)
..+.+|...|.+++|+|++++|++++.||.|++||+.+.+... +..+..++.++.| .+++.+|++++.||.|++||+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 4566789999999999999999999999999999998877654 5668889999999 788999999999999999999
Q ss_pred cCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec---CCccceEEEEeCCC-CCCEEEEEe
Q 047355 89 NTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE---GHSHYVMQSAFNPK-DLNTFASAS 164 (312)
Q Consensus 89 ~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~-~~~~~~s~s 164 (312)
.+.+.+..+..|. .+.++.+. ...+++++.++.+++|++........... .+......+...+. ....+++++
T Consensus 159 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 159 RSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp SCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec
Confidence 9988888887765 46666655 45788899999999999876544333222 22233333333322 223499999
Q ss_pred CCCeEEEEEcCCC---cceeeeccccc------------ceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc
Q 047355 165 LDGTIQIWNMDSS---AAKFTLDAHEK------------GINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG 229 (312)
Q Consensus 165 ~dg~v~iwd~~~~---~~~~~~~~~~~------------~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 229 (312)
.|+.|++||++.. .....+..|.. .+.++++ ++++.+|++|+.||.|++||+++++++..+.+
T Consensus 236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF--HPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE--CTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE--ecCCCEEEEEccCCeEEEEECCCCcEEEEecC
Confidence 9999999999987 45566677765 6887764 78899999999999999999999999999999
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCCcEEEEeC
Q 047355 230 HTNNVTAVCFHPELRIIITASEDGTILIWNA 260 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~ 260 (312)
|..+|++++|+|++++|++++.|+..+.|++
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CCCCceEEEECCCCCeEEEEecccccccccc
Confidence 9999999999999999999999986555553
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.2e-31 Score=223.74 Aligned_cols=208 Identities=10% Similarity=0.064 Sum_probs=159.4
Q ss_pred cCcEEEEEEcCC----CCeEEEEec--------------------CCeEEEEec-cCCceeeeEEecCCceeEEEEee--
Q 047355 17 SDRVKSVDFHPT----QPWVLASLY--------------------SGTVCIWNY-HSQTTEKSVKVTDSPVRTAKFVA-- 69 (312)
Q Consensus 17 ~~~i~~~~~~~~----~~~l~~~~~--------------------dg~v~iw~~-~~~~~~~~~~~~~~~v~~~~~~~-- 69 (312)
...|++++|+|+ ++++++++. |+.|++|++ +.++....+..+...+..++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 458899999999 888887664 899999999 44777778888999999999999
Q ss_pred -CCcEEEEecCCCeEEEEEccCceeeeeeccccc---ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc
Q 047355 70 -REHWIVCGSDDKFIRVFDYNTMASVKEFEAHED---YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145 (312)
Q Consensus 70 -~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~---~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~ 145 (312)
++..|++|+.|++|++||+++++.++.+.+|.. .+.+++|+|++.++++++.+.. +|
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w----------------- 251 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE----------------- 251 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------------------
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc-----------------
Confidence 779999999999999999999999999986543 5777899999998888775321 11
Q ss_pred ceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeee-----cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCC
Q 047355 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-----DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET 220 (312)
Q Consensus 146 ~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 220 (312)
.+++|+.|++|++||..+++....+ .+|...+.+.+ . ++.++++|+.|++|++||+.+
T Consensus 252 -------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~--~--sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 252 -------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD--V--KDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp -------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE--E--ETTEEEEEETTSCEEEEETTT
T ss_pred -------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc--c--CCCEEEEEcCCCcEEEEECCC
Confidence 3567888999999998887765443 35544433222 2 266899999999999999999
Q ss_pred CeEEEEecccccCeE-EEEEeCCCcEEEEEeCCCcEEEEeC
Q 047355 221 KTCVQILEGHTNNVT-AVCFHPELRIIITASEDGTILIWNA 260 (312)
Q Consensus 221 ~~~~~~~~~h~~~i~-~l~~~~~~~~l~s~s~dg~v~iwd~ 260 (312)
+++++++.+|...+. +++|+|++++|++|+.|++|+|||+
T Consensus 315 Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 315 GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999987655 6899999999999999999999995
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.6e-29 Score=219.87 Aligned_cols=249 Identities=13% Similarity=0.101 Sum_probs=201.8
Q ss_pred cCcEEEEEEcCCCCeE-EEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccCceee
Q 047355 17 SDRVKSVDFHPTQPWV-LASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASV 94 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l-~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~ 94 (312)
...+.+++|+|++++| ++++.|+.|++||+.+++....+..+. .+..++|++++++|+ +++.++.|++||+.+++..
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 3568999999999987 566689999999999888877776655 889999999999875 5557799999999998887
Q ss_pred eeecccccceeEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEE
Q 047355 95 KEFEAHEDYIRSLAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173 (312)
Q Consensus 95 ~~~~~h~~~i~~~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd 173 (312)
..+..| ..+.+++|+|+++.+ ++++.|+.|++||+... +....+..+. .+..+.|+|.+..++++++.++.|++||
T Consensus 110 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 110 GTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK-AVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp EEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 777655 468999999999977 68888999999998765 4445555443 4578899986544557888999999999
Q ss_pred cCCCcceeeecccccceeEEEEEEcCCceEEEEEe---CCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEE-EEE
Q 047355 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS---DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII-ITA 249 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l-~s~ 249 (312)
+++.+....+.. ...+.++. +++++.++++++ .++.|++||+++++.+..+..|. .+.+++|+|+++++ +++
T Consensus 187 ~~~~~~~~~~~~-~~~~~~~~--~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~ 262 (391)
T 1l0q_A 187 TVTNSVIDTVKV-EAAPSGIA--VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVAL 262 (391)
T ss_dssp TTTTEEEEEEEC-SSEEEEEE--ECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEE
T ss_pred CCCCeEEEEEec-CCCccceE--ECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEc
Confidence 998876665543 44566665 578888888877 68999999999999888888765 57899999999877 677
Q ss_pred eCCCcEEEEeCCCcceeeecccCc
Q 047355 250 SEDGTILIWNATTFRLQNTLSSGL 273 (312)
Q Consensus 250 s~dg~v~iwd~~~~~~~~~~~~~~ 273 (312)
+.|+.|++||+.++++...+..+.
T Consensus 263 ~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 263 SFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSS
T ss_pred CCCCEEEEEECCCCcEEEEEECCc
Confidence 889999999999988877766553
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=7.3e-29 Score=218.65 Aligned_cols=280 Identities=9% Similarity=0.122 Sum_probs=217.7
Q ss_pred cCcEEEEE---EcCCCCeEEEEe--------------cCCeEEEEeccC--C--ceeeeEEecCCceeEEEEeeCCcEEE
Q 047355 17 SDRVKSVD---FHPTQPWVLASL--------------YSGTVCIWNYHS--Q--TTEKSVKVTDSPVRTAKFVAREHWIV 75 (312)
Q Consensus 17 ~~~i~~~~---~~~~~~~l~~~~--------------~dg~v~iw~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~ 75 (312)
...+..++ |+|++..++... .++.+++|.++. . +....+..+. .+.+++|++++.+++
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAI 138 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEE
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEE
Confidence 35678888 888877666432 233235555433 3 3334444333 455889999777888
Q ss_pred EecCCCeEEEEEccCceeee-----eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEE
Q 047355 76 CGSDDKFIRVFDYNTMASVK-----EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS 150 (312)
Q Consensus 76 ~g~~dg~i~iwd~~~~~~~~-----~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~ 150 (312)
+++.++.|++||+.+++... .+.+|...|.+++++|++.++++++.|+.|++||+... .....+..|...+..+
T Consensus 139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~-~~~~~~~~~~~~~~~~ 217 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL-AYKATVDLTGKWSKIL 217 (433)
T ss_dssp EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-CEEEEEECSSSSEEEE
T ss_pred EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc-eEEEEEcCCCCCeeEE
Confidence 88899999999999887766 44578889999999999999999999999999998765 4556677888899999
Q ss_pred EeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEe--------CCCeEEEEeCCCCe
Q 047355 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS--------DDFTVKVWDYETKT 222 (312)
Q Consensus 151 ~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~--------~dg~i~vwd~~~~~ 222 (312)
.|+|.+..++++++.|+.|++||+++.+....+..+. .+..+. +++++.++++++ .|+.|++||+++++
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~--~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLL--LSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEE--ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEE--EcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 9999654455667689999999999887776665543 456555 578888888887 58899999999988
Q ss_pred EEEEecccccCeEEEEEeCCCc-EEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEec--------
Q 047355 223 CVQILEGHTNNVTAVCFHPELR-IIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCD-------- 293 (312)
Q Consensus 223 ~~~~~~~h~~~i~~l~~~~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------- 293 (312)
....+ .|...+.+++|+|+++ ++++++.|+.|++||+.+++....+. +...+.+++|+|+++.|++++.
T Consensus 295 ~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 295 LIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred EEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 77765 4667899999999996 45677899999999999888777665 5677899999999999988877
Q ss_pred -------CCeEEEEecc
Q 047355 294 -------NGTLIVKIGN 303 (312)
Q Consensus 294 -------~g~i~v~~~~ 303 (312)
||.++++-..
T Consensus 373 ~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp TTSCCSSCCEEEEEETT
T ss_pred cccccccceEEEEEECC
Confidence 4688887654
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=3.4e-28 Score=220.10 Aligned_cols=281 Identities=12% Similarity=0.201 Sum_probs=219.5
Q ss_pred EEEEEEcCCCCeEEEEecCCeEEEEec--cCCceeeeEEecCCceeEEEEee----CCcEEEEecC-CCeEEEEEccCce
Q 047355 20 VKSVDFHPTQPWVLASLYSGTVCIWNY--HSQTTEKSVKVTDSPVRTAKFVA----REHWIVCGSD-DKFIRVFDYNTMA 92 (312)
Q Consensus 20 i~~~~~~~~~~~l~~~~~dg~v~iw~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~g~~-dg~i~iwd~~~~~ 92 (312)
+..++|+|||++|++++.|++|++||+ .+.+....+.. ......++|++ +++++++++. +++|.+||..+.+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 889999999999999999999999999 77777777764 44568999999 9999999885 8999999999998
Q ss_pred eeeeeccc----------cc-ceeEEEEecCCCE-EEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEE
Q 047355 93 SVKEFEAH----------ED-YIRSLAVHPTFPF-VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTF 160 (312)
Q Consensus 93 ~~~~~~~h----------~~-~i~~~~~~~~~~~-l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 160 (312)
.++.+..+ .. .+.++.++|++.. +++...++.|.+||.............+...+..+.|+|.+..++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEE
Confidence 88877642 22 6889999997665 567778999999998764322211223445566788998653344
Q ss_pred EEEeCCCeEEEEEcCCCcceeeecc----cccceeEEEEEEcCC-ceEEEEEe-CCCeEEEEeCCC-------CeEEEEe
Q 047355 161 ASASLDGTIQIWNMDSSAAKFTLDA----HEKGINCIDYFITSD-KVYLITGS-DDFTVKVWDYET-------KTCVQIL 227 (312)
Q Consensus 161 ~s~s~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~-~~~l~sg~-~dg~i~vwd~~~-------~~~~~~~ 227 (312)
+++..+++|.+||+.+++....+.. |..... .+ ..++ +..++++. .|++|.+||+.+ .++++.+
T Consensus 340 va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~--~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 340 TAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA--NF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE--EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc--cc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE
Confidence 5556789999999999887776654 432222 22 2455 77777776 689999999988 8999999
Q ss_pred cccccCeEEEEEeCCCcEEEEEe-------CCCcEEEEeCCCccee-eec--------ccCccceEEEEEecCCCeEEEE
Q 047355 228 EGHTNNVTAVCFHPELRIIITAS-------EDGTILIWNATTFRLQ-NTL--------SSGLERVWSIGYKKGSNQVAFG 291 (312)
Q Consensus 228 ~~h~~~i~~l~~~~~~~~l~s~s-------~dg~v~iwd~~~~~~~-~~~--------~~~~~~v~~~~~~~~~~~l~~~ 291 (312)
.+|...+..++|+|++++|++++ .+++|.+||+.+++.. ..+ ..+..+++.++|+|+|+.|.++
T Consensus 417 ~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 417 QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 99998889999999999999987 2789999999988765 332 3456789999999999999977
Q ss_pred e-----cCCeEEEEeccC
Q 047355 292 C-----DNGTLIVKIGNS 304 (312)
Q Consensus 292 ~-----~~g~i~v~~~~~ 304 (312)
. .++.|.|+=..+
T Consensus 497 ~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 497 VWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp EECCTTSCCEEEEEETTT
T ss_pred eecCCCCCCeEEEEECCC
Confidence 4 368888865443
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=6.4e-28 Score=211.83 Aligned_cols=274 Identities=15% Similarity=0.074 Sum_probs=207.6
Q ss_pred CcEEEEEEcCCCC-eEEEEe----cCC----eEEEEec--cCCcee--eeEEecCCceeEEEEee--------------C
Q 047355 18 DRVKSVDFHPTQP-WVLASL----YSG----TVCIWNY--HSQTTE--KSVKVTDSPVRTAKFVA--------------R 70 (312)
Q Consensus 18 ~~i~~~~~~~~~~-~l~~~~----~dg----~v~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~ 70 (312)
..+...+|.+.+. .+++|+ .|| ++++||+ .+++.+ ..+..+...+..+++.+ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 3677788888885 455775 467 8999999 877765 34666666565555543 1
Q ss_pred CcEEEEecCC------CeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCC---cEEEEeCCCCceeeeEec
Q 047355 71 EHWIVCGSDD------KFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK---LIKLWDWEKNWECTQTFE 141 (312)
Q Consensus 71 ~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~---~v~iwd~~~~~~~~~~~~ 141 (312)
+..++.++.+ +.|++||++. ...+.+..|...+.+++|+|+++.|++++.++ .|++||+.+... ..+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--EEee
Confidence 4556655543 7999999975 45677788999999999999999999999875 999999986533 3456
Q ss_pred CCccceEEEEeCCCCCCEEE-EEeCCCe--EEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeC-CC--eEEE
Q 047355 142 GHSHYVMQSAFNPKDLNTFA-SASLDGT--IQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD-DF--TVKV 215 (312)
Q Consensus 142 ~~~~~v~~~~~~~~~~~~~~-s~s~dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~-dg--~i~v 215 (312)
.+...+..+.|+|.+ ..++ +++.++. |++||+.+++. ..+..|...+.++.| +|++.+|+.++. ++ .|.+
T Consensus 220 ~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~--spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTW--FPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEE--CTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEE--CCCCCEEEEEECCCCCcEEEE
Confidence 677788999999964 5555 7776664 99999988765 456677777777764 789998888776 44 6888
Q ss_pred EeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCC---CcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEe
Q 047355 216 WDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED---GTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 216 wd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
||+.+++. ..+..|...+.+++|+|++++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|+|+.|++++
T Consensus 296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEE
T ss_pred EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEE
Confidence 89887764 3455577789999999999999988864 58999999987764 344443 889999999999999888
Q ss_pred cCC---eEEEEe
Q 047355 293 DNG---TLIVKI 301 (312)
Q Consensus 293 ~~g---~i~v~~ 301 (312)
.++ .|+++-
T Consensus 373 ~~~~~~~l~~~d 384 (415)
T 2hqs_A 373 SQGMGSVLNLVS 384 (415)
T ss_dssp EETTEEEEEEEE
T ss_pred cCCCccEEEEEE
Confidence 766 555554
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=8.8e-27 Score=210.89 Aligned_cols=277 Identities=14% Similarity=0.121 Sum_probs=218.9
Q ss_pred EEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEc--cCceeeeeecccc
Q 047355 24 DFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDY--NTMASVKEFEAHE 101 (312)
Q Consensus 24 ~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~~~h~ 101 (312)
+|+|++..++++..|++|.+||..+++....+..... +..+.|++++++|++++.|+.|.+||+ .+.+.+..+.. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 4889998899999999999999999988888874443 778899999999999999999999999 78887777764 4
Q ss_pred cceeEEEEec----CCCEEEEEe-CCCcEEEEeCCCCceeeeEecC----------C-ccceEEEEeCCCCCCEEEEEeC
Q 047355 102 DYIRSLAVHP----TFPFVLTAS-DDKLIKLWDWEKNWECTQTFEG----------H-SHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 102 ~~i~~~~~~~----~~~~l~t~s-~d~~v~iwd~~~~~~~~~~~~~----------~-~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
.....++|+| +++++++++ .+++|.+||..+. ++.+.+.. | ...+..+.++|.+..++++...
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~-~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL-EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 5679999999 999998887 4899999998765 44444433 2 2267788899877778888889
Q ss_pred CCeEEEEEcCCCccee--eecccccceeEEEEEEcCCceEEEE-EeCCCeEEEEeCCCCeEEEEecc----cccCeEEEE
Q 047355 166 DGTIQIWNMDSSAAKF--TLDAHEKGINCIDYFITSDKVYLIT-GSDDFTVKVWDYETKTCVQILEG----HTNNVTAVC 238 (312)
Q Consensus 166 dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s-g~~dg~i~vwd~~~~~~~~~~~~----h~~~i~~l~ 238 (312)
+++|.+||..+.+... .+ .+...+..+. ++++++++++ +..+++|.+||..+++++..+.. |.+....+
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~--~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~- 376 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSI-GAAPFLHDGG--WDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF- 376 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEE-ECCSSCCCEE--ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-
T ss_pred CCeEEEEEecCCCcceeEEe-ccCcCccCce--ECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-
Confidence 9999999998765433 22 2333344444 5788887655 45689999999999999888764 55444343
Q ss_pred EeCC-CcEEEEEe-CCCcEEEEeCCC-------cceeeecccCccceEEEEEecCCCeEEEEe-------cCCeEEEEec
Q 047355 239 FHPE-LRIIITAS-EDGTILIWNATT-------FRLQNTLSSGLERVWSIGYKKGSNQVAFGC-------DNGTLIVKIG 302 (312)
Q Consensus 239 ~~~~-~~~l~s~s-~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~g~i~v~~~ 302 (312)
++|+ ++.++++. .|++|.+||+.+ ++.++++..+...++.++|+|+++.|.+++ .+++|.|+-.
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 4787 66777776 689999999988 889999998888889999999999999987 2678888876
Q ss_pred cCCCC
Q 047355 303 NSSGC 307 (312)
Q Consensus 303 ~~~~~ 307 (312)
++..+
T Consensus 457 ~~~~~ 461 (543)
T 1nir_A 457 KNLDA 461 (543)
T ss_dssp TCTTS
T ss_pred CCCCC
Confidence 65444
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.1e-26 Score=203.98 Aligned_cols=263 Identities=11% Similarity=0.082 Sum_probs=202.7
Q ss_pred hhcccCcEEEEEEcC--------------CCCeEEEEecC------CeEEEEeccCCceeeeEEecCCceeEEEEeeCCc
Q 047355 13 FIQKSDRVKSVDFHP--------------TQPWVLASLYS------GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREH 72 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~--------------~~~~l~~~~~d------g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 72 (312)
|.+|...+..+++++ .+.+++.++.+ +.|++||++.. ..+.+..+...+..++|+|+++
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~ 191 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGS 191 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSS
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCC
Confidence 445555555555553 26677776664 79999999754 4566777888999999999999
Q ss_pred EEEEecCCC---eEEEEEccCceeeeeecccccceeEEEEecCCCEEE-EEeCCCc--EEEEeCCCCceeeeEecCCccc
Q 047355 73 WIVCGSDDK---FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKL--IKLWDWEKNWECTQTFEGHSHY 146 (312)
Q Consensus 73 ~l~~g~~dg---~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-t~s~d~~--v~iwd~~~~~~~~~~~~~~~~~ 146 (312)
+|++++.++ .|++||+.+++.. .+..|...+.+++|+|+++.|+ +++.++. |++||+.... ...+..|...
T Consensus 192 ~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~~ 268 (415)
T 2hqs_A 192 KLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSN 268 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEECCCCSSC
T ss_pred EEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EEeCcCCCCc
Confidence 999998875 9999999987654 5667888899999999999887 6666665 8899987643 2456677788
Q ss_pred eEEEEeCCCCCCEEEEEeC-CC--eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCC---CeEEEEeCCC
Q 047355 147 VMQSAFNPKDLNTFASASL-DG--TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD---FTVKVWDYET 220 (312)
Q Consensus 147 v~~~~~~~~~~~~~~s~s~-dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d---g~i~vwd~~~ 220 (312)
+..+.|+|. +..+++++. ++ .|++||+.+++. ..+..+...+..+. ++|++.+|+.++.+ ..|++||+.+
T Consensus 269 ~~~~~~spd-g~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~--~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 269 NTEPTWFPD-SQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDAD--VSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp EEEEEECTT-SSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEE--ECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred ccceEECCC-CCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeE--ECCCCCEEEEEECcCCceEEEEEECCC
Confidence 899999995 566776665 45 677789887654 33444555566555 58899998888764 5899999998
Q ss_pred CeEEEEecccccCeEEEEEeCCCcEEEEEeCCC---cEEEEeCCCcceeeecccCccceEEEEEecCCC
Q 047355 221 KTCVQILEGHTNNVTAVCFHPELRIIITASEDG---TILIWNATTFRLQNTLSSGLERVWSIGYKKGSN 286 (312)
Q Consensus 221 ~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 286 (312)
++.. .+..|. .+.+++|+|++++|++++.++ .|++||+. ++....+..+...|.+++|+|...
T Consensus 345 ~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 345 GGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 8764 455554 899999999999999998887 79999986 455677888889999999999754
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.2e-26 Score=217.94 Aligned_cols=279 Identities=10% Similarity=0.067 Sum_probs=211.1
Q ss_pred cCcEEEEEEcCCCCeEEEEec-CC-----eEEEEeccCCceeeeEEecCC------------------------ceeEEE
Q 047355 17 SDRVKSVDFHPTQPWVLASLY-SG-----TVCIWNYHSQTTEKSVKVTDS------------------------PVRTAK 66 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~-dg-----~v~iw~~~~~~~~~~~~~~~~------------------------~v~~~~ 66 (312)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 899999988876665544322 277899
Q ss_pred EeeCCcEEEEecCCCeEEEEEccCce--eeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCc
Q 047355 67 FVAREHWIVCGSDDKFIRVFDYNTMA--SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS 144 (312)
Q Consensus 67 ~~~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~ 144 (312)
|+|++++|++++. +.|++||+.++. ....+..|...+..++|+|++++|++++. +.|++||+.... .......+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~-~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGR-QMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTE-EEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCC-EEEeccCCc
Confidence 9999999999887 899999998873 44567778888999999999999998874 689999987653 222222222
Q ss_pred cc----------------eEEEEeCCCCCCEEEEEeCCC---------------------------------eEEEEEcC
Q 047355 145 HY----------------VMQSAFNPKDLNTFASASLDG---------------------------------TIQIWNMD 175 (312)
Q Consensus 145 ~~----------------v~~~~~~~~~~~~~~s~s~dg---------------------------------~v~iwd~~ 175 (312)
.. +..+.|+|. +..+++++.|+ .|++||+.
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred cceeccccceeeeeccccccceEECCC-CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 21 356789985 56777776665 78999998
Q ss_pred C-Ccceeeec--ccccceeEEEEEEcCCceEEEEEeC-----CCeEEEEeCCCCeEEEEeccccc----CeEEEEEeCCC
Q 047355 176 S-SAAKFTLD--AHEKGINCIDYFITSDKVYLITGSD-----DFTVKVWDYETKTCVQILEGHTN----NVTAVCFHPEL 243 (312)
Q Consensus 176 ~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~h~~----~i~~l~~~~~~ 243 (312)
+ ++...... .|...+..+.| +||.+|+.++. +..|.+||+.+++....+..|.. .+..++|+|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~---pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW---RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE---EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCceEEecCCCCcceEEEEEEe---CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 7 66544332 35566777765 56777776543 56899999999988777766553 45689999999
Q ss_pred cEEEEEeCCCcEEEEeCC-CcceeeecccCccceEEE-EEecCCCeEEEEec-CC--eEEEEecc
Q 047355 244 RIIITASEDGTILIWNAT-TFRLQNTLSSGLERVWSI-GYKKGSNQVAFGCD-NG--TLIVKIGN 303 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~-~g--~i~v~~~~ 303 (312)
+++++++.||.++||.+. +++ ...+..+...+..+ +|+|+++.|++.+. ++ +++||..+
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred eEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 999999999988888664 344 66777777778887 59999998875554 44 77777654
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=1.1e-24 Score=186.50 Aligned_cols=270 Identities=10% Similarity=0.079 Sum_probs=206.1
Q ss_pred cCcEEEEEEcCCCCeEEEEec-------CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEc
Q 047355 17 SDRVKSVDFHPTQPWVLASLY-------SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDY 88 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~-------dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~ 88 (312)
...+..++|+|+++++++++. ++.|.+||..+.+....+.... ....+.+++++++++ +...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 457889999999999888774 5689999999888777776544 466789999998655 4556799999999
Q ss_pred cCceeeeeecccccc---------eeEEEEecCCCEEEEEe--CCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCC
Q 047355 89 NTMASVKEFEAHEDY---------IRSLAVHPTFPFVLTAS--DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157 (312)
Q Consensus 89 ~~~~~~~~~~~h~~~---------i~~~~~~~~~~~l~t~s--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 157 (312)
.+++....+..+... +.+++++|+++.+++++ .++.|.+||..+. +....+..+...+..+.|+|. +
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~d-g 196 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI-KLKTAIQNTGKMSTGLALDSE-G 196 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT-EEEEEECCCCTTCCCCEEETT-T
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC-ceEEEecCCCCccceEEECCC-C
Confidence 998877777654422 68899999999877665 5788999998765 444555534445667788884 5
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceeeecc----cccceeEEEEEEcCCceEEEEEe-CCCeEEEEeCCCCeEEEEeccccc
Q 047355 158 NTFASASLDGTIQIWNMDSSAAKFTLDA----HEKGINCIDYFITSDKVYLITGS-DDFTVKVWDYETKTCVQILEGHTN 232 (312)
Q Consensus 158 ~~~~s~s~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h~~ 232 (312)
..+++++.++.|.+||+.+.+....+.. +...+..+. +++++.+++.++ .++.|.+||..+++.+..+..+.
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINIS--LDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE--EETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEE--ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 7788888899999999998877666543 333444555 467777555554 55999999999998887776443
Q ss_pred CeEEEEEeCCCcEEEEEe-CCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecC
Q 047355 233 NVTAVCFHPELRIIITAS-EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 294 (312)
...++|+|++++++.+. .++.|.+||..+++....+... ..+.+++|+|+|+.|.++..+
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 25799999998655554 7899999999998887776543 468999999999988777765
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.8e-26 Score=191.00 Aligned_cols=256 Identities=11% Similarity=0.087 Sum_probs=193.5
Q ss_pred EecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC-ceeeeeeccc-ccceeEEEEecC
Q 047355 35 SLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT-MASVKEFEAH-EDYIRSLAVHPT 112 (312)
Q Consensus 35 ~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h-~~~i~~~~~~~~ 112 (312)
++.|+.|++||+.+++.. .+..+...+.++.|+|++++|++++ ++.|++||+.+ .+.......| ...+.+++|+|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 457899999999887655 4455677899999999999999886 78999999998 7766666555 367899999999
Q ss_pred CCEEEEEe--CCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCC-Ccceeeecccccc
Q 047355 113 FPFVLTAS--DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS-SAAKFTLDAHEKG 189 (312)
Q Consensus 113 ~~~l~t~s--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~-~~~~~~~~~~~~~ 189 (312)
++++++++ .++..++|.+.........+..+. .+..+.|+|.+..++++++.++.+++|+++. ......+..+...
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 99999988 445667776532222233343333 3777899996544455888999999999643 2334455566667
Q ss_pred eeEEEEEEcCCceEEEEEe-CCCeEEEEeCC-CCeEEEEecccccCeEEEEEeCCCcEEEEEeCC-----------CcEE
Q 047355 190 INCIDYFITSDKVYLITGS-DDFTVKVWDYE-TKTCVQILEGHTNNVTAVCFHPELRIIITASED-----------GTIL 256 (312)
Q Consensus 190 v~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~-~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d-----------g~v~ 256 (312)
+.++.| ++++.+++.++ .++.+++|++. .+.....+..|...+..++|+|++++|++++.+ +.|+
T Consensus 175 ~~~~~~--s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 175 NDGPDY--SPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp EEEEEE--CTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred cccceE--CCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 777664 78888777665 58999999875 455566777788889999999999999988876 5699
Q ss_pred EEeCCCccee--eecccCccceEEEEEecCCCeEEEEecCC
Q 047355 257 IWNATTFRLQ--NTLSSGLERVWSIGYKKGSNQVAFGCDNG 295 (312)
Q Consensus 257 iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~g 295 (312)
+||+.+++.. ..+..+...+..++|+|+++.|++++.+.
T Consensus 253 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 253 LMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9999887653 33445667888999999999999888764
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=9.8e-25 Score=185.41 Aligned_cols=275 Identities=10% Similarity=0.116 Sum_probs=196.2
Q ss_pred EEEcCCCCe-EEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecC-CCeEEEEEccCcee-eeeecc
Q 047355 23 VDFHPTQPW-VLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD-DKFIRVFDYNTMAS-VKEFEA 99 (312)
Q Consensus 23 ~~~~~~~~~-l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~-~~~~~~ 99 (312)
..|.+++++ +++...++.|++||..+++....+..+.... .++|+++++++++++. ++.|.+||..+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 356676665 5567788999999999888877777666666 9999999997776655 89999999998876 667777
Q ss_pred cccceeEEEEecCCCEEEEEeCCC---cEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe-EEEEEcC
Q 047355 100 HEDYIRSLAVHPTFPFVLTASDDK---LIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT-IQIWNMD 175 (312)
Q Consensus 100 h~~~i~~~~~~~~~~~l~t~s~d~---~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~-v~iwd~~ 175 (312)
+..+..+++++|++++++++..++ .|.+||.... +....+..+ .....+.|+|.+..++++...++. |.+|+++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN-KFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT-EEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC-CeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 777666699999999988555553 8999998765 334444433 345788999966556666677788 9999998
Q ss_pred CCcceee----ecccccceeEEEEEEcCCceEE-EEEeCCCeEEEEeCCCCeE---EEEecccccCeEEEEEeCCCcEEE
Q 047355 176 SSAAKFT----LDAHEKGINCIDYFITSDKVYL-ITGSDDFTVKVWDYETKTC---VQILEGHTNNVTAVCFHPELRIII 247 (312)
Q Consensus 176 ~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~---~~~~~~h~~~i~~l~~~~~~~~l~ 247 (312)
....... ..........+. +++++.++ +++..++.|.+||+.+++. +..+.. ...+..++|+|++++++
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~--~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNIT--FTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEE--ECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEE
T ss_pred CCCcEeecCCccccCCCCccceE--ECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEE
Confidence 6443311 112223344444 57888754 5555789999999988876 666664 45678999999999766
Q ss_pred EEe-CCCcEEEEeCCCcce--eeecccC----cc---ceEEEEEecCCCeEEEEec-CCeEEEEecc
Q 047355 248 TAS-EDGTILIWNATTFRL--QNTLSSG----LE---RVWSIGYKKGSNQVAFGCD-NGTLIVKIGN 303 (312)
Q Consensus 248 s~s-~dg~v~iwd~~~~~~--~~~~~~~----~~---~v~~~~~~~~~~~l~~~~~-~g~i~v~~~~ 303 (312)
.+. .++.|.+||..++++ ...+... .. ....++|+||++.|++++. ++.+.||-..
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 554 578899999998776 2222221 11 2245899999998866554 6688888654
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=1.8e-25 Score=209.48 Aligned_cols=280 Identities=11% Similarity=0.108 Sum_probs=201.9
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCC---ceeEEEEeeCCcEEEEecCC---------CeEEE
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS---PVRTAKFVAREHWIVCGSDD---------KFIRV 85 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~g~~d---------g~i~i 85 (312)
..+.+++|+|||+++++ +.||+|++||+.+++....+..+.. .+..++|+||+++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 45789999999997766 7899999999998877666655543 38999999999999998764 78889
Q ss_pred EEccCcee--eeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccc-----------------
Q 047355 86 FDYNTMAS--VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHY----------------- 146 (312)
Q Consensus 86 wd~~~~~~--~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~----------------- 146 (312)
||+.+++. +.....|...+..++|+|+++.|++++. +.|++||...... ......+...
T Consensus 96 ~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEecc
Confidence 99988764 2222345556899999999999999886 7899999876532 3333332222
Q ss_pred -eEEEEeCCCCCCEEEEEeCCC----------------------------------eEEEEEcCCCcceeeeccc-----
Q 047355 147 -VMQSAFNPKDLNTFASASLDG----------------------------------TIQIWNMDSSAAKFTLDAH----- 186 (312)
Q Consensus 147 -v~~~~~~~~~~~~~~s~s~dg----------------------------------~v~iwd~~~~~~~~~~~~~----- 186 (312)
+..+.|+|. +..|++++.|+ +|++||+.+.+....+..+
T Consensus 174 ~~~~~~~SpD-g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 174 THIAHWWSPD-GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSEEEEECTT-SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred CcceEEECCC-CCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 267899995 57787776543 7999999887754555543
Q ss_pred -ccceeEEEEEEcCCceEEEEEeC----CCeEEEEeCCCCeEEEEeccc-ccCeE----EEEEeCCCcEEEE--EeCCC-
Q 047355 187 -EKGINCIDYFITSDKVYLITGSD----DFTVKVWDYETKTCVQILEGH-TNNVT----AVCFHPELRIIIT--ASEDG- 253 (312)
Q Consensus 187 -~~~v~~~~~~~~~~~~~l~sg~~----dg~i~vwd~~~~~~~~~~~~h-~~~i~----~l~~~~~~~~l~s--~s~dg- 253 (312)
...+..+. ++|||+++++.+. +..|++||+.+++....+..+ ...+. .++|+||++.|+. ...++
T Consensus 253 ~~~~~~~~~--~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 253 REYYITMVK--WATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp SSEEEEEEE--ESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred ccceeEEEE--EeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 34555555 5889998877653 357999999998877666443 34443 7899999997775 45667
Q ss_pred -----cEEEEe-CCCcce--eeecccCccceEE-EEEecCCCeEEEEecC---CeEEEEecc
Q 047355 254 -----TILIWN-ATTFRL--QNTLSSGLERVWS-IGYKKGSNQVAFGCDN---GTLIVKIGN 303 (312)
Q Consensus 254 -----~v~iwd-~~~~~~--~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~---g~i~v~~~~ 303 (312)
.|.+|| ..+.+. ...+..+...+.. ++|+|||+.|++.+.+ +++.|+..+
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 577777 344441 4445444444444 6999999999877665 777777754
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=8.2e-24 Score=180.12 Aligned_cols=270 Identities=11% Similarity=0.141 Sum_probs=182.9
Q ss_pred CCCeEEEE-ecCCeEEEEeccC-Cce-eeeEEecCCceeEEEEeeCCcEEEEecCC-CeEEEEEcc--Cce--eeeeecc
Q 047355 28 TQPWVLAS-LYSGTVCIWNYHS-QTT-EKSVKVTDSPVRTAKFVAREHWIVCGSDD-KFIRVFDYN--TMA--SVKEFEA 99 (312)
Q Consensus 28 ~~~~l~~~-~~dg~v~iw~~~~-~~~-~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-g~i~iwd~~--~~~--~~~~~~~ 99 (312)
.+++++++ +.|+.|++|+++. ++. ......+...+..++|++++++|++++.+ +.|.+|+++ ++. .+..+..
T Consensus 3 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 3 LKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp CEEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred ceEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 34455555 7799999999863 221 11222355678889999999998888876 999999987 433 3344444
Q ss_pred cccceeEEEEecCCCEEEEEe-CCCcEEEEeCCCC--ceeeeEecCCccceEEEEeCCCCCCEEEEEe-CCCeEEEEEcC
Q 047355 100 HEDYIRSLAVHPTFPFVLTAS-DDKLIKLWDWEKN--WECTQTFEGHSHYVMQSAFNPKDLNTFASAS-LDGTIQIWNMD 175 (312)
Q Consensus 100 h~~~i~~~~~~~~~~~l~t~s-~d~~v~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s-~dg~v~iwd~~ 175 (312)
+. .+..++|+|+++++++++ .++.|.+||+... ......+..+ ..+..+.|+|.+ ..+++++ .++.|++||+.
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEec
Confidence 44 789999999999876665 4888999998421 1223333333 346678899854 5555555 89999999998
Q ss_pred C-Cccee----eecc-cccceeEEEEEEcCCceEEE-EEeCCCeEEEEeCCC--CeE--EEEec----cc--ccCeEEEE
Q 047355 176 S-SAAKF----TLDA-HEKGINCIDYFITSDKVYLI-TGSDDFTVKVWDYET--KTC--VQILE----GH--TNNVTAVC 238 (312)
Q Consensus 176 ~-~~~~~----~~~~-~~~~v~~~~~~~~~~~~~l~-sg~~dg~i~vwd~~~--~~~--~~~~~----~h--~~~i~~l~ 238 (312)
+ ++... .... ....+..+. +++++.+++ ++..++.|.+|++.. ++. ...+. ++ ...+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMV--FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEE--ECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred CCCceeeecccccccCCCCCcceEE--ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 7 43321 1222 223455554 578887665 445889999999853 332 22222 11 23577899
Q ss_pred EeCCCcEEE-EEeCCCcEEEEeCC----CcceeeecccCccceEEEEEecCCCeEEEEe-cCCeEEEEecc
Q 047355 239 FHPELRIII-TASEDGTILIWNAT----TFRLQNTLSSGLERVWSIGYKKGSNQVAFGC-DNGTLIVKIGN 303 (312)
Q Consensus 239 ~~~~~~~l~-s~s~dg~v~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~v~~~~ 303 (312)
|+|++++|+ ++..++.|++||+. +.+....+..+.. +..++|+|+++.|++++ .++.+.|+..+
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 999998776 55579999999987 2344444444433 88999999999888888 58999988544
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=7.1e-24 Score=180.49 Aligned_cols=267 Identities=12% Similarity=0.130 Sum_probs=181.6
Q ss_pred cccCcEEEEEEcCCCCeEEEEecC-CeEEEEecc--CCcee--eeEEecCCceeEEEEeeCCcEEEEec-CCCeEEEEEc
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYS-GTVCIWNYH--SQTTE--KSVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVFDY 88 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~d-g~v~iw~~~--~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~ 88 (312)
.+...+..++|+|++++|++++.+ +.|++|+++ +++.. ..+.... .+..++|++++++|++++ .++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 456678899999999999998887 999999997 44432 3333333 678899999999887665 4899999999
Q ss_pred ---cCceeeeeecccccceeEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeee----EecC-CccceEEEEeCCCCCCE
Q 047355 89 ---NTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS-DDKLIKLWDWEKNWECTQ----TFEG-HSHYVMQSAFNPKDLNT 159 (312)
Q Consensus 89 ---~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s-~d~~v~iwd~~~~~~~~~----~~~~-~~~~v~~~~~~~~~~~~ 159 (312)
.+......+..+ ..+.+++|+|+++++++++ .++.+++||+........ .... ....+..+.|+|.+..+
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 444444444444 3588999999999888776 899999999876222211 2222 23456778999865434
Q ss_pred EEEEeCCCeEEEEEcCC--Ccc--eeeec----ccc--cceeEEEEEEcCCceEEE-EEeCCCeEEEEeCC--C--CeEE
Q 047355 160 FASASLDGTIQIWNMDS--SAA--KFTLD----AHE--KGINCIDYFITSDKVYLI-TGSDDFTVKVWDYE--T--KTCV 224 (312)
Q Consensus 160 ~~s~s~dg~v~iwd~~~--~~~--~~~~~----~~~--~~v~~~~~~~~~~~~~l~-sg~~dg~i~vwd~~--~--~~~~ 224 (312)
++++..++.|++||++. +.. ...+. .+. ..+..+ .+++++.+++ ++..++.|.+||+. + .+.+
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i--~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI--HITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE--EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce--EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 55556899999999964 322 11111 111 123334 4578887666 55589999999997 2 3445
Q ss_pred EEecccccCeEEEEEeCCCcEEEEEe-CCCcEEEE--eCCCcce--eeecccCccceEEEEEecCCCe
Q 047355 225 QILEGHTNNVTAVCFHPELRIIITAS-EDGTILIW--NATTFRL--QNTLSSGLERVWSIGYKKGSNQ 287 (312)
Q Consensus 225 ~~~~~h~~~i~~l~~~~~~~~l~s~s-~dg~v~iw--d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ 287 (312)
..+..+.. +.+++|+|++++|++++ .++.|.+| |..++++ +..+.. .....+++|.|+.+.
T Consensus 271 ~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 271 GFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEGG 336 (343)
T ss_dssp EEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC--
T ss_pred eeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccCC
Confidence 55554444 88999999999888887 68999999 4445543 333332 245667777776554
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.9e-24 Score=210.19 Aligned_cols=275 Identities=10% Similarity=0.063 Sum_probs=216.5
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccC-CceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-QTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~ 91 (312)
+.+|...+.++.|+++ ..++++..|+++++|.++. ......+..+. .+....|++++++|+.+ .++.|.+|++...
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~ 275 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE 275 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTC
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCce
Confidence 4567889999999988 6666778889999998753 22333443333 35667999999988887 4899999998543
Q ss_pred eeeeeecc-----------cccceeEEEEe-cCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc-ceEEEEeCCCCCC
Q 047355 92 ASVKEFEA-----------HEDYIRSLAVH-PTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH-YVMQSAFNPKDLN 158 (312)
Q Consensus 92 ~~~~~~~~-----------h~~~i~~~~~~-~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ 158 (312)
. +..+.. |...+.+++|+ |+++.+++++ ++.+.+|+..... ...+..|.. .+..+.|+ ++.
T Consensus 276 ~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s--dg~ 349 (1045)
T 1k32_A 276 K-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD--TKV 349 (1045)
T ss_dssp C-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS--SEE
T ss_pred E-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc--CCC
Confidence 3 334443 45579999999 9999998888 7899999986542 233555666 78888898 567
Q ss_pred EEEEEeCCCeEE-EEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEE
Q 047355 159 TFASASLDGTIQ-IWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237 (312)
Q Consensus 159 ~~~s~s~dg~v~-iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l 237 (312)
.+++++.+..+. +||+.+..... +..|...+..+. ++||+.+|++++.++.|++||+.+++....+.+|...+.++
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~--~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMG--VDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEE--ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred eEEEEECCCceEEEEECCCCCceE-ecCCccceeeeE--ECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence 888888888888 99998765443 346666677665 58899999999999999999999999888887899999999
Q ss_pred EEeCCCcEEEEEeCCC----------cEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 238 CFHPELRIIITASEDG----------TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 238 ~~~~~~~~l~s~s~dg----------~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
+|+||+++|++++.++ .|++||+.+++ ...+..+...+..++|+|||+.|++++.++...++
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 9999999999887654 89999998877 56677777888999999999999999987654443
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=2.1e-24 Score=202.84 Aligned_cols=267 Identities=9% Similarity=0.059 Sum_probs=199.2
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCc--eeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT--TEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
.|.+++|+|||++|++++. +.|++||+.++. ....+..+...+..+.|+|++++|+.++. +.|++||+.+++..+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 4789999999999998886 999999998762 33445556678999999999999998875 6899999998766554
Q ss_pred ecccccc----------------eeEEEEecCCCEEEEEeCCC---------------------------------cEEE
Q 047355 97 FEAHEDY----------------IRSLAVHPTFPFVLTASDDK---------------------------------LIKL 127 (312)
Q Consensus 97 ~~~h~~~----------------i~~~~~~~~~~~l~t~s~d~---------------------------------~v~i 127 (312)
...+... +.+++|+|++++|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 4444332 47899999999999887765 7888
Q ss_pred EeCCC-CceeeeEec--CCccceEEEEeCCCCCCEEEEEeC-----CCeEEEEEcCCCcceeeeccccc----ceeEEEE
Q 047355 128 WDWEK-NWECTQTFE--GHSHYVMQSAFNPKDLNTFASASL-----DGTIQIWNMDSSAAKFTLDAHEK----GINCIDY 195 (312)
Q Consensus 128 wd~~~-~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~s~-----dg~v~iwd~~~~~~~~~~~~~~~----~v~~~~~ 195 (312)
||+.. ... ..... .|...+..+.| |. +..++..+. +..|++||+.+++....+..+.. .+..+.
T Consensus 268 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pD-g~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~- 343 (741)
T 2ecf_A 268 ISPAEQAQT-QWIDLGKEQDIYLARVNW-RD-PQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR- 343 (741)
T ss_dssp ECSSTTCCC-EEECCCSCSSEEEEEEEE-EE-TTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE-
T ss_pred EECCCCCce-EEecCCCCcceEEEEEEe-CC-CCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE-
Confidence 89876 432 22221 46778899999 85 566665543 56899999998877666555442 223444
Q ss_pred EEcCCceEEEEEeCCCeEEEEeCC-CCeEEEEecccccCeEEE-EEeCCCcEEE-EEeCCC--cEEEEeCCC-cceeeec
Q 047355 196 FITSDKVYLITGSDDFTVKVWDYE-TKTCVQILEGHTNNVTAV-CFHPELRIII-TASEDG--TILIWNATT-FRLQNTL 269 (312)
Q Consensus 196 ~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~i~~l-~~~~~~~~l~-s~s~dg--~v~iwd~~~-~~~~~~~ 269 (312)
+++|+.++++++.||.+++|.+. .++ ...+..|...|..+ .|+|+++.|+ +++.++ .++||++.. ++....+
T Consensus 344 -~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 344 -FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp -ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred -ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 47888899999999987777654 344 77777788888887 5999998775 555555 899998754 4444555
Q ss_pred ccCccceEEEEEecCCCeEEEEecC
Q 047355 270 SSGLERVWSIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~~ 294 (312)
.. ...+..++|+|||+.|++...+
T Consensus 422 ~~-~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 422 SK-APGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp CC-SCSEEEEEECTTSSEEEEEEEE
T ss_pred cc-CCCceEEEECCCCCEEEEEecC
Confidence 54 5668899999999999876553
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=1.1e-23 Score=196.92 Aligned_cols=277 Identities=8% Similarity=0.023 Sum_probs=201.1
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC-----ce
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT-----MA 92 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-----~~ 92 (312)
..|.+++|+|| ..++.+ .++.|++||+.+++... +..+...+..++|+|++++|+.+ .++.|++|++.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 56999999999 666655 46999999998775543 34455668889999999999885 679999999988 66
Q ss_pred eeeeecccccc--------------eeEEEEecCCCEEEEEe---------------------------------CCCcE
Q 047355 93 SVKEFEAHEDY--------------IRSLAVHPTFPFVLTAS---------------------------------DDKLI 125 (312)
Q Consensus 93 ~~~~~~~h~~~--------------i~~~~~~~~~~~l~t~s---------------------------------~d~~v 125 (312)
..+....+... +.++.|+|++++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 55444444333 48899999999999887 45679
Q ss_pred EEEeCCCCceeeeEe-cCCccceEEEEeCCCCCCEEEEEeCCC-----eEEEEEcCCCcceeeec-c-cccc---eeEEE
Q 047355 126 KLWDWEKNWECTQTF-EGHSHYVMQSAFNPKDLNTFASASLDG-----TIQIWNMDSSAAKFTLD-A-HEKG---INCID 194 (312)
Q Consensus 126 ~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~s~dg-----~v~iwd~~~~~~~~~~~-~-~~~~---v~~~~ 194 (312)
.+||+.......... ..|...+..+.|+|. +..+++++.++ .|++||+.+++....+. . +... +..+.
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTT-SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECC-CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 999987653221111 246678889999984 57788877775 89999999873333322 1 1111 23344
Q ss_pred EEEcC--CceEEEEEeCCCeEEEEeCC-CCeEEEEecccccCeEE-EEEeCCCcEEEEEeC-CC----cEEEEeCCCcce
Q 047355 195 YFITS--DKVYLITGSDDFTVKVWDYE-TKTCVQILEGHTNNVTA-VCFHPELRIIITASE-DG----TILIWNATTFRL 265 (312)
Q Consensus 195 ~~~~~--~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~i~~-l~~~~~~~~l~s~s~-dg----~v~iwd~~~~~~ 265 (312)
+++ ++.++++++.|+.+++|++. ++.....+..|...+.. ++|+|+++.|+.++. ++ .|..||..+++.
T Consensus 317 --~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 394 (706)
T 2z3z_A 317 --FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT 394 (706)
T ss_dssp --ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC
T ss_pred --eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc
Confidence 477 89999999999999999875 56677778878878877 799999987765554 44 677778776653
Q ss_pred eeecccCccceEEEEEecCCCeEEEEecC----CeEEEEecc
Q 047355 266 QNTLSSGLERVWSIGYKKGSNQVAFGCDN----GTLIVKIGN 303 (312)
Q Consensus 266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~v~~~~ 303 (312)
..+. +...+.+++|+|||+.|++.+.+ +.++++-.+
T Consensus 395 -~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 395 -KDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp -EESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred -eecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 3333 45668899999999999877554 457776543
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=6.7e-24 Score=194.15 Aligned_cols=270 Identities=13% Similarity=0.039 Sum_probs=194.2
Q ss_pred cCcEEEEEEcCCCCeEEEEec-CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecC---CCeEEEEEccC--
Q 047355 17 SDRVKSVDFHPTQPWVLASLY-SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD---DKFIRVFDYNT-- 90 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~-- 90 (312)
..+|++++|+|||++|+.++. ||+++||+++.++..+....+...+..+.|+|+ +.+++++. +....+|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 458999999999999998876 999999999766554433333357888999998 77777664 45566665543
Q ss_pred ceeeeeecccccceeEEEEecCCCE-EEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC---
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPF-VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD--- 166 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~-l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d--- 166 (312)
......+..+. .+...+++|+++. +++.+.++.+.+||+.+.. .......+. ....|+| ++..+++++.+
T Consensus 100 ~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-~~~l~~~~~---~~~~~sp-DG~~la~~~~~~~~ 173 (582)
T 3o4h_A 100 PGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGG-LRELARLPG---FGFVSDI-RGDLIAGLGFFGGG 173 (582)
T ss_dssp TTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTE-EEEEEEESS---CEEEEEE-ETTEEEEEEEEETT
T ss_pred CCccccccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCc-EEEeecCCC---ceEEECC-CCCEEEEEEEcCCC
Confidence 22222332222 2445678888753 3344444555699987652 222222222 6678888 56788877777
Q ss_pred -CeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCC--eEEEEeCCCCeEEEEecccccCeEEEE-----
Q 047355 167 -GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF--TVKVWDYETKTCVQILEGHTNNVTAVC----- 238 (312)
Q Consensus 167 -g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~i~~l~----- 238 (312)
+.|++||+.+++.. .+..|...+..+. ++|||++|+++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~~~~~--~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSFSSAS--ISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEEEEEE--ECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CeEEEEEcCCCCCce-EeecCCCccccce--ECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 78999999887654 5667777776665 589999999888888 8999999988877 7778877777777
Q ss_pred ---EeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCe-EEEEecc
Q 047355 239 ---FHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGT-LIVKIGN 303 (312)
Q Consensus 239 ---~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~-i~v~~~~ 303 (312)
|+||+.++++++.|+++++|++ ++.... ....+.+++|+ +++.+++++.+.+ -.++..+
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~---~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GERVEA---PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TEEECC---CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc---CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999999999999999999999 555442 23568899999 9999998888765 3344433
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=1.2e-23 Score=204.59 Aligned_cols=284 Identities=12% Similarity=0.095 Sum_probs=203.9
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEEecC------CeEEEEeccCCceeeeEEecCCce-------eEEEEeeCCcEEEEe
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLASLYS------GTVCIWNYHSQTTEKSVKVTDSPV-------RTAKFVAREHWIVCG 77 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~iw~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~g 77 (312)
+++..|...+.+++|+|||++|+.++.+ ..|++|++.+++ .+.+..+...+ ..+.|+|+++.++++
T Consensus 46 ~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~ 124 (1045)
T 1k32_A 46 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST 124 (1045)
T ss_dssp EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEE
Confidence 4566788899999999999999988654 378999988765 45566666666 889999999977777
Q ss_pred cCC------CeEEEEEccCceee-------------------------------------------------eeeccccc
Q 047355 78 SDD------KFIRVFDYNTMASV-------------------------------------------------KEFEAHED 102 (312)
Q Consensus 78 ~~d------g~i~iwd~~~~~~~-------------------------------------------------~~~~~h~~ 102 (312)
+.+ ..|..|++.++... ..+.+|..
T Consensus 125 ~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~ 204 (1045)
T 1k32_A 125 DAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST 204 (1045)
T ss_dssp CTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS
T ss_pred CCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCC
Confidence 754 45777877654321 11234556
Q ss_pred ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCC---------------------------------------
Q 047355 103 YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGH--------------------------------------- 143 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~--------------------------------------- 143 (312)
.+.++.|+++ .++++++.|+.+++|.+.........+..|
T Consensus 205 ~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~ 283 (1045)
T 1k32_A 205 HVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIG 283 (1045)
T ss_dssp CCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCC
T ss_pred cccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccC
Confidence 6777777776 555677778888888753211111111111
Q ss_pred -----------ccceEEEEeC-CCCCCEEEEEeCCCeEEEEEcCCCcceeeeccccc-ceeEEEEEEcCCceEEEEEeCC
Q 047355 144 -----------SHYVMQSAFN-PKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEK-GINCIDYFITSDKVYLITGSDD 210 (312)
Q Consensus 144 -----------~~~v~~~~~~-~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~sg~~d 210 (312)
...+..+.|+ |. +..+++++ ++.+++|++...... .+..|.. .+..+. ++ ++..++.++.+
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pd-G~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~--~s-dg~~l~~~s~~ 357 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLD-GDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRG--GD-TKVAFIHGTRE 357 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECG-GGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEEC--SS-SEEEEEEEETT
T ss_pred cccccccccccccccceeeecCCC-CCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeee--Ec-CCCeEEEEECC
Confidence 1134556677 63 45555555 677777777655433 3444544 555555 45 88889998888
Q ss_pred CeEE-EEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEE
Q 047355 211 FTVK-VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289 (312)
Q Consensus 211 g~i~-vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 289 (312)
+.+. +||..+++..... +|...+..++|+|++++|++++.++.|++||+.+++.......+...+..++|+|||+.|+
T Consensus 358 ~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred CceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 8898 9999877665544 7888999999999999999999999999999999888777767878889999999999999
Q ss_pred EEecCC----------eEEEEecc
Q 047355 290 FGCDNG----------TLIVKIGN 303 (312)
Q Consensus 290 ~~~~~g----------~i~v~~~~ 303 (312)
+++.++ .+++|-..
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETT
T ss_pred EEecCccccccCCCCCeEEEEECC
Confidence 888754 77777543
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.2e-24 Score=179.47 Aligned_cols=236 Identities=9% Similarity=0.036 Sum_probs=177.0
Q ss_pred hhhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccC-CceeeeEEec-CCceeEEEEeeCCcEEEEec--CCCeEEEEE
Q 047355 12 EFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHS-QTTEKSVKVT-DSPVRTAKFVAREHWIVCGS--DDKFIRVFD 87 (312)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~--~dg~i~iwd 87 (312)
.+..|...|.+++|+|++++|++++ ++.|++||+.+ .+.......+ ...+..+.|++++++|++++ .++...+|.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 4556788999999999999999876 88999999988 7665555444 35678899999999999988 334555555
Q ss_pred c--cCceeeeeecccccceeEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEE-
Q 047355 88 Y--NTMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA- 163 (312)
Q Consensus 88 ~--~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~- 163 (312)
+ .+.. ...+..+. .+..++|+|+++.++ +++.++.+++|++.........+..+...+..+.|+|.+ ..++.+
T Consensus 115 ~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~ 191 (297)
T 2ojh_A 115 LPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDG-RWIYFNS 191 (297)
T ss_dssp EETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTS-SEEEEEE
T ss_pred EECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCC-CEEEEEe
Confidence 4 4433 34444443 488899999999877 778899999999643323345566677788999999854 555554
Q ss_pred eCCCeEEEEEcC-CCcceeeecccccceeEEEEEEcCCceEEEEEeCC-----------CeEEEEeCCCCeE--EEEecc
Q 047355 164 SLDGTIQIWNMD-SSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD-----------FTVKVWDYETKTC--VQILEG 229 (312)
Q Consensus 164 s~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----------g~i~vwd~~~~~~--~~~~~~ 229 (312)
..++.+++|+++ .......+..|...+..+. +++++.+|+.++.+ +.|.+||+.+++. +..+.+
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 269 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPH--PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFG 269 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEE--ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEE
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeE--ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCC
Confidence 468999999986 4455566666766666665 47889888888765 5699999987755 344457
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCC
Q 047355 230 HTNNVTAVCFHPELRIIITASEDG 253 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg 253 (312)
|...+.+++|+|++++|++++.+.
T Consensus 270 ~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 270 GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp STTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccceECCCCCEEEEEEecc
Confidence 888999999999999998887654
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=4.1e-23 Score=175.35 Aligned_cols=262 Identities=10% Similarity=0.075 Sum_probs=193.6
Q ss_pred CeEEEEecCCeEEEEeccCCceeeeEEecCC--ceeEEEEeeCCcEEE-EecCCCeEEEEEccCceeeeeecc-----cc
Q 047355 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDS--PVRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASVKEFEA-----HE 101 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~-----h~ 101 (312)
+++++++.++.|++||+.+.+....+..... ....++|+++++.++ ++..++.|.+||+.+++....+.. |.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999998877777664432 467889999997764 566789999999998877665543 22
Q ss_pred cceeEEEEecCCCEEEEEe------------CCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 102 DYIRSLAVHPTFPFVLTAS------------DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 102 ~~i~~~~~~~~~~~l~t~s------------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
..+..++++|+++++++++ .++.|.+||.... .....+.. ...+..+.|+|.+ ..++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~-~~~~~~~~~s~dg-~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL-SRRKAFEA-PRQITMLAWARDG-SKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT-EEEEEEEC-CSSCCCEEECTTS-SCEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC-cEEEEEeC-CCCcceeEECCCC-CEEEEe--CCeE
Confidence 3678899999999888875 5799999998765 33333433 2345567789854 555555 6899
Q ss_pred EEEEcCCCcceeeecccc--cceeEEEEEEcCCceEEEEEeC-CC-----------------------eEEEEeCCCCeE
Q 047355 170 QIWNMDSSAAKFTLDAHE--KGINCIDYFITSDKVYLITGSD-DF-----------------------TVKVWDYETKTC 223 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~sg~~-dg-----------------------~i~vwd~~~~~~ 223 (312)
++||+.+.+....+..+. .++ . +++++..++..+. ++ .|.+||..+++.
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~---~--~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAET---Y--AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTT---B--CCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred EEEECCCCcEeeeeeccccCCCc---e--eCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 999999887665554433 222 1 3555554433332 22 478999998876
Q ss_pred E-EEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 224 V-QILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 224 ~-~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
. ..+..+...+.+++|+|++++++++ ++.|++||+.+++....+..+ ..+.+++|+|+++.|++++.++.|.++-.
T Consensus 232 ~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 4 2334566678899999999999888 799999999998877666533 46789999999999999999999998865
Q ss_pred cC
Q 047355 303 NS 304 (312)
Q Consensus 303 ~~ 304 (312)
.+
T Consensus 309 ~~ 310 (337)
T 1pby_B 309 ET 310 (337)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=2.5e-23 Score=183.41 Aligned_cols=214 Identities=13% Similarity=0.133 Sum_probs=162.8
Q ss_pred CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCcee----------ee-----eecccccc
Q 047355 39 GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS----------VK-----EFEAHEDY 103 (312)
Q Consensus 39 g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~----------~~-----~~~~h~~~ 103 (312)
+.+++|+.... .....+..+++++++.++++|+.++ +++|+...... .. ..-.|...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 56788764311 1234577888999999999999888 88887542111 00 11134567
Q ss_pred eeEEEEecCCCEEE----EEeCCCcEEEEeCCCC-----c-----eeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 104 IRSLAVHPTFPFVL----TASDDKLIKLWDWEKN-----W-----ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 104 i~~~~~~~~~~~l~----t~s~d~~v~iwd~~~~-----~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
|.+++|+|++++|+ +++.|+.|++||+... . .....+.+|...+..+.|+|.+..++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 7889999999997532 0 12345667899999999999767899999999999
Q ss_pred EEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc-------ccCeEEEEEeCC
Q 047355 170 QIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH-------TNNVTAVCFHPE 242 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~i~~l~~~~~ 242 (312)
++||+++........+|...+.+++| ++++.+|++|+.||.|++||.+ ++....+..| ...|.+++|+++
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~w--spdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCW--SPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEE--CTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred EEEEcCCCcceeeccCCCCceeEEEE--cCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 99999988666666778888999885 7789999999999999999998 5555555443 237999999998
Q ss_pred CcEEEE-EeCCCc------EEEEeCCCc
Q 047355 243 LRIIIT-ASEDGT------ILIWNATTF 263 (312)
Q Consensus 243 ~~~l~s-~s~dg~------v~iwd~~~~ 263 (312)
+.++++ .+.||. +++|++...
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceEEEEEccCCCccCCCCceEEEEeccC
Confidence 887754 334433 899998754
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=8.3e-22 Score=167.28 Aligned_cols=244 Identities=8% Similarity=0.073 Sum_probs=175.9
Q ss_pred ccCcEEEEEEcCCCCeEEEEec-CCeEEEEeccCCce-eeeEEecCCceeEEEEeeCCcEEEEecCCC---eEEEEEccC
Q 047355 16 KSDRVKSVDFHPTQPWVLASLY-SGTVCIWNYHSQTT-EKSVKVTDSPVRTAKFVAREHWIVCGSDDK---FIRVFDYNT 90 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~-dg~v~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg---~i~iwd~~~ 90 (312)
+...+ .++|+|+++++++++. ++.|.+||+.+.+. ...+..+..+...+.|++++++++++..++ .|.+||+++
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 34556 9999999998777665 89999999988876 666666666665589999999999665553 899999999
Q ss_pred ceeeeeecccccceeEEEEecCCCEEE-EEeCCCc-EEEEeCCCCceee---eEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKL-IKLWDWEKNWECT---QTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~-t~s~d~~-v~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
++....+..+. ...+++|+|++++++ +...++. +.+|++....... ............+.|+|.+..+++++..
T Consensus 118 ~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 196 (331)
T 3u4y_A 118 NKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI 196 (331)
T ss_dssp TEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC
Confidence 88777765543 468999999998655 4456688 9999987532221 1111233446788999865445666667
Q ss_pred CCeEEEEEcCCCcc---eeeecccccceeEEEEEEcCCceEEEEE-eCCCeEEEEeCCCCeE--EEEeccc----cc---
Q 047355 166 DGTIQIWNMDSSAA---KFTLDAHEKGINCIDYFITSDKVYLITG-SDDFTVKVWDYETKTC--VQILEGH----TN--- 232 (312)
Q Consensus 166 dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~--~~~~~~h----~~--- 232 (312)
++.|++||+.+.+. ...+..+ ..+..+. +++++.+++.+ ..++.|.+||.++++. +..+..+ ..
T Consensus 197 ~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~--~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T 3u4y_A 197 GNSIGILETQNPENITLLNAVGTN-NLPGTIV--VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF 273 (331)
T ss_dssp TTEEEEEECSSTTSCEEEEEEECS-SCCCCEE--ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT
T ss_pred CCeEEEEECCCCcccceeeeccCC-CCCceEE--ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc
Confidence 99999999998776 5555443 3344454 57888866554 4578899999998876 3333322 22
Q ss_pred CeEEEEEeCCCcEEEEEeC-CCcEEEEeCCCcc
Q 047355 233 NVTAVCFHPELRIIITASE-DGTILIWNATTFR 264 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~-dg~v~iwd~~~~~ 264 (312)
....++|+|++++|+.++. ++.|.+||+....
T Consensus 274 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 274 GANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 2356899999998765554 5699999998644
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.6e-21 Score=166.80 Aligned_cols=249 Identities=11% Similarity=0.166 Sum_probs=171.4
Q ss_pred cccCcEEEEEEcCCCCeEEEEec---CCeEEEEeccCCce--eeeEEecCCceeEEEEeeCCcEEEEec-CCCeEEEEEc
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLY---SGTVCIWNYHSQTT--EKSVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVFDY 88 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~---dg~v~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~ 88 (312)
.+......++|+|+|+ |++++. ++.|++|+++.++. +..+..+......++|++++++|++++ .++.|.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3446678899999999 666655 68999999976543 333344566778899999999888887 7899999999
Q ss_pred cC---ceeeeeecc---------cccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee--eeEecC-CccceEEEEeC
Q 047355 89 NT---MASVKEFEA---------HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC--TQTFEG-HSHYVMQSAFN 153 (312)
Q Consensus 89 ~~---~~~~~~~~~---------h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~--~~~~~~-~~~~v~~~~~~ 153 (312)
.. ...+..+.. +...+.+++++|+++++++...++.+.+||+...... ...+.. .......+.|+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 63 222333221 1224788999999996667777889999998732221 112222 22345678999
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCC--Ccce--eeecccc------cceeEEEEEEcCCceEE-EEEeCCCeEEEEeCC---
Q 047355 154 PKDLNTFASASLDGTIQIWNMDS--SAAK--FTLDAHE------KGINCIDYFITSDKVYL-ITGSDDFTVKVWDYE--- 219 (312)
Q Consensus 154 ~~~~~~~~s~s~dg~v~iwd~~~--~~~~--~~~~~~~------~~v~~~~~~~~~~~~~l-~sg~~dg~i~vwd~~--- 219 (312)
|.+..++++...++.|++|+++. ++.. ..+.... ..+..+ .++++|++| ++...++.|.+|++.
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i--~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI--RLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE--EECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE--EECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 95433555567789999999875 3221 1222111 223444 468899876 566678999999986
Q ss_pred CCeEEEEecccccCeEEEEEeCCCcEEEEEeCC-CcEEEE--eCCCccee
Q 047355 220 TKTCVQILEGHTNNVTAVCFHPELRIIITASED-GTILIW--NATTFRLQ 266 (312)
Q Consensus 220 ~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d-g~v~iw--d~~~~~~~ 266 (312)
+.+.+..+..+...+..++|+|++++|++++.+ +.|.+| |..++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 274 HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 235556666667778999999999988888765 899999 55566654
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=5.9e-21 Score=163.28 Aligned_cols=263 Identities=11% Similarity=0.107 Sum_probs=178.3
Q ss_pred cCCeEEEEeccC--Cceee-eEEecCCceeEEEEeeCCcEEEEecC---CCeEEEEEccCce--eeeeecccccceeEEE
Q 047355 37 YSGTVCIWNYHS--QTTEK-SVKVTDSPVRTAKFVAREHWIVCGSD---DKFIRVFDYNTMA--SVKEFEAHEDYIRSLA 108 (312)
Q Consensus 37 ~dg~v~iw~~~~--~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~~~--~~~~~~~h~~~i~~~~ 108 (312)
.++.|.+|+++. ++... ....+......++|+++++ |++++. ++.|.+|++.++. .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 356788887754 33222 2223345566789999998 665554 6899999997654 3444455777889999
Q ss_pred EecCCCEEEEEe-CCCcEEEEeCCCCc--eeeeEecC---------CccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCC
Q 047355 109 VHPTFPFVLTAS-DDKLIKLWDWEKNW--ECTQTFEG---------HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176 (312)
Q Consensus 109 ~~~~~~~l~t~s-~d~~v~iwd~~~~~--~~~~~~~~---------~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~ 176 (312)
++|++++|++++ .++.+.+|++.... .....+.. +...+..+.|+|.+. ++++...++.|++|++..
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECC
Confidence 999999888777 68999999986321 22222211 122467789999654 777777789999999983
Q ss_pred -Cccee--eeccc-ccceeEEEEEEcCCceEEE-EEeCCCeEEEEeCCC--CeE--EEEecccc------cCeEEEEEeC
Q 047355 177 -SAAKF--TLDAH-EKGINCIDYFITSDKVYLI-TGSDDFTVKVWDYET--KTC--VQILEGHT------NNVTAVCFHP 241 (312)
Q Consensus 177 -~~~~~--~~~~~-~~~v~~~~~~~~~~~~~l~-sg~~dg~i~vwd~~~--~~~--~~~~~~h~------~~i~~l~~~~ 241 (312)
+.... .+..+ ......+. +++++.+++ ++..++.|.+|++.. ++. ...+.... ..+..++|+|
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~--~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLV--FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEE--ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCcEEEeeeEEcCCCCCCceEE--ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 33221 11111 12344444 578888554 456788999999763 543 22332222 3488999999
Q ss_pred CCcEE-EEEeCCCcEEEEeCC---CcceeeecccCccceEEEEEecCCCeEEEEec-CCeEEEEecc
Q 047355 242 ELRII-ITASEDGTILIWNAT---TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCD-NGTLIVKIGN 303 (312)
Q Consensus 242 ~~~~l-~s~s~dg~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~v~~~~ 303 (312)
++++| ++...++.|.+|++. +.+....+..+...+..++|+|||+.|++++. ++.+.++..+
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 99977 566678999999987 23445555555566889999999999888776 4888887554
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.4e-22 Score=189.90 Aligned_cols=269 Identities=9% Similarity=0.067 Sum_probs=187.2
Q ss_pred cEEEEEEcCCCCeEEEEecC---------CeEEEEeccCCceeeeEEe---cCCceeEEEEeeCCcEEEEecCCCeEEEE
Q 047355 19 RVKSVDFHPTQPWVLASLYS---------GTVCIWNYHSQTTEKSVKV---TDSPVRTAKFVAREHWIVCGSDDKFIRVF 86 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~d---------g~v~iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 86 (312)
.|.+++|+|||++|++++.+ +.+.+||+.+++. ..+.. +...+..+.|+|++++|+.++. +.|++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 48999999999999998764 7888999987765 23322 2234778899999999998886 799999
Q ss_pred EccCceeeeeecccccce------------------eEEEEecCCCEEEEEeCCC-------------------------
Q 047355 87 DYNTMASVKEFEAHEDYI------------------RSLAVHPTFPFVLTASDDK------------------------- 123 (312)
Q Consensus 87 d~~~~~~~~~~~~h~~~i------------------~~~~~~~~~~~l~t~s~d~------------------------- 123 (312)
|+.+++..+....+...+ .+++|+|+++.|++++.|+
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 998877665555444333 7899999999999887553
Q ss_pred ---------cEEEEeCCCCceeeeEecCC------ccceEEEEeCCCCCCEEEEEeC----CCeEEEEEcCCCcceeeec
Q 047355 124 ---------LIKLWDWEKNWECTQTFEGH------SHYVMQSAFNPKDLNTFASASL----DGTIQIWNMDSSAAKFTLD 184 (312)
Q Consensus 124 ---------~v~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~s~s~----dg~v~iwd~~~~~~~~~~~ 184 (312)
.+++||+.... ....+..+ ...+..+.|+|. +..+++.+. +..|++||+.+++....+.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATS-TKVAVTWLNRAQNVSILTLCDATTGVCTKKHE 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSS-SEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCc-eeEEeeCCccCCCccceeEEEEEeCC-CeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE
Confidence 78999987653 22333333 567888999995 456655543 3579999999887665543
Q ss_pred cc-cccee----EEEEEEcCCceEEEE--EeCCC------eEEEEe-CCCCe--EEEEecccccCeEE-EEEeCCCcEEE
Q 047355 185 AH-EKGIN----CIDYFITSDKVYLIT--GSDDF------TVKVWD-YETKT--CVQILEGHTNNVTA-VCFHPELRIII 247 (312)
Q Consensus 185 ~~-~~~v~----~~~~~~~~~~~~l~s--g~~dg------~i~vwd-~~~~~--~~~~~~~h~~~i~~-l~~~~~~~~l~ 247 (312)
.+ ...+. .+. ++|||..|+. +..++ .|.+|| ..++. +...+..+...+.. ++|+|+++.|+
T Consensus 298 ~~~~~~~~~~~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 298 DESEAWLHRQNEEPV--FSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp EECSSCCCCCCCCCE--ECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred eccCCEEeccCCCce--EcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEE
Confidence 32 22222 333 5788886664 45677 577788 34443 13444433444554 69999999987
Q ss_pred EEeCC---CcEEEEeCCCcc--eeeeccc---CccceEEEEEecCCCeEEEEec
Q 047355 248 TASED---GTILIWNATTFR--LQNTLSS---GLERVWSIGYKKGSNQVAFGCD 293 (312)
Q Consensus 248 s~s~d---g~v~iwd~~~~~--~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~ 293 (312)
..+.+ +.++||++.... ....+.. +...+..++|+|||+.|+....
T Consensus 376 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 376 FLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp EEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 66655 789999876422 2333333 4556889999999999987544
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=2.4e-22 Score=187.89 Aligned_cols=265 Identities=14% Similarity=0.102 Sum_probs=186.5
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCcee-eeEEecC-----------------CceeEEEEeeCCcEEEEecCC
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTE-KSVKVTD-----------------SPVRTAKFVAREHWIVCGSDD 80 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~g~~d 80 (312)
.+..+.|. +..++++..|+ | +||+.+++.. ..+..+. ..+..++|+++ +.++.+ .+
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~ 100 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQ 100 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ET
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-EC
Confidence 35557777 66777777777 8 9999887762 3332222 46899999999 665555 35
Q ss_pred CeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCC-----CceeeeEecCCccc---------
Q 047355 81 KFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK-----NWECTQTFEGHSHY--------- 146 (312)
Q Consensus 81 g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~-----~~~~~~~~~~~~~~--------- 146 (312)
+.|++||+.+++.. .+..+...+.+++|+|+++.|+++ .|+.|++||+.. .. .......+...
T Consensus 101 ~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~-~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 GGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR-AIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC-CEESCSCCBTTEEESSCCGG
T ss_pred CEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC-cEEeccCCCCCeEcccchhh
Confidence 99999999887654 444566778999999999999885 679999999876 42 22222222221
Q ss_pred -----eEEEEeCCCCCCEEEEEe---------------------------------CCCeEEEEEcCCCcceeeec--cc
Q 047355 147 -----VMQSAFNPKDLNTFASAS---------------------------------LDGTIQIWNMDSSAAKFTLD--AH 186 (312)
Q Consensus 147 -----v~~~~~~~~~~~~~~s~s---------------------------------~dg~v~iwd~~~~~~~~~~~--~~ 186 (312)
+..+.|+|. +..+++++ .+..|++||+.+++...... .|
T Consensus 178 ee~~~~~~~~~SpD-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 178 REFGIEKGTFWSPK-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GCTTCCCSEEECTT-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhcCCCceEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 367889984 57788776 44679999998876544332 34
Q ss_pred ccceeEEEEEEcCCceEEEEEeCCC-----eEEEEeCCCC-eEEEEecc-ccc---CeEEEEEeC--CCcEEEEEeCCCc
Q 047355 187 EKGINCIDYFITSDKVYLITGSDDF-----TVKVWDYETK-TCVQILEG-HTN---NVTAVCFHP--ELRIIITASEDGT 254 (312)
Q Consensus 187 ~~~v~~~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~-~~~~~~~~-h~~---~i~~l~~~~--~~~~l~s~s~dg~ 254 (312)
...+..+. +++|+.+|++++.++ .|.+||..++ ........ +.. .+..++|+| +++++++++.|+.
T Consensus 257 ~~~~~~~~--~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 257 EKFLTNLS--WSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp TCEEEEEE--ECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred ceeEeeEE--EECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 55566665 478999898887776 8999999988 44333322 222 246789999 9999999999999
Q ss_pred EEEEeCC-CcceeeecccCccceEE-EEEecCCCeEEEEecCC
Q 047355 255 ILIWNAT-TFRLQNTLSSGLERVWS-IGYKKGSNQVAFGCDNG 295 (312)
Q Consensus 255 v~iwd~~-~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~g 295 (312)
++||.+. +++....+..+...+.. ++|+|+++.|++++.+.
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSS
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCC
Confidence 9999875 56666777777777776 89999999988766543
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=9.2e-23 Score=191.08 Aligned_cols=273 Identities=13% Similarity=0.112 Sum_probs=194.2
Q ss_pred EEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCC---ceeEEEEeeCCcEEEEecC---------CCeEEEEEc
Q 047355 21 KSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS---PVRTAKFVAREHWIVCGSD---------DKFIRVFDY 88 (312)
Q Consensus 21 ~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~g~~---------dg~i~iwd~ 88 (312)
..++|+|++++++ .+.|++|++||+.+++....+..+.. .+..+.|+||+++|+.++. ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 3789999996554 55799999999998877666554432 3889999999999998876 789999999
Q ss_pred cCceee--eeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccce-----------------EE
Q 047355 89 NTMASV--KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV-----------------MQ 149 (312)
Q Consensus 89 ~~~~~~--~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v-----------------~~ 149 (312)
++++.. ..+ ...+..++|+|+|+.|+++. ++.|++||+...........++...+ ..
T Consensus 98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 98 SNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 987652 222 24688999999999999886 78999999876533221222332222 36
Q ss_pred EEeCCCCCCEEEEEeCCC----------------------------------eEEEEEcCCCcce--ee------ecccc
Q 047355 150 SAFNPKDLNTFASASLDG----------------------------------TIQIWNMDSSAAK--FT------LDAHE 187 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~dg----------------------------------~v~iwd~~~~~~~--~~------~~~~~ 187 (312)
+.|+|. +..|++++.|. +|++||+.+.+.. .. +..|.
T Consensus 174 ~~wSPD-G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 174 LWWSPN-GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp EEECTT-SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred EEECCC-CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 889984 57888877552 7889999877642 11 23466
Q ss_pred cceeEEEEEEcCCceEEEEEeCC----CeEEEEe----CCCCeEEEEe----cccccCeE-----EEEEeCCCcEEEE--
Q 047355 188 KGINCIDYFITSDKVYLITGSDD----FTVKVWD----YETKTCVQIL----EGHTNNVT-----AVCFHPELRIIIT-- 248 (312)
Q Consensus 188 ~~v~~~~~~~~~~~~~l~sg~~d----g~i~vwd----~~~~~~~~~~----~~h~~~i~-----~l~~~~~~~~l~s-- 248 (312)
..+..+. ++||+.++++.... ..|.+|| ..++++...+ .+|...+. .++|+|+++.++.
T Consensus 253 ~~~~~~~--~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 253 YYFSWLT--WVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp EEEEEEE--ESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred ceEEEeE--EeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 6677766 47788877774432 2488899 8777665555 46777776 8899999986554
Q ss_pred EeCCC--cEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecC-----CeEEEEecc
Q 047355 249 ASEDG--TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN-----GTLIVKIGN 303 (312)
Q Consensus 249 ~s~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~v~~~~ 303 (312)
...+| .|.+||+.+.+ ...+..+...+..+.+. +++.|++.+.+ ++..++..+
T Consensus 331 ~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp ECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 44555 57777877665 44555556668888888 99988887765 677766543
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.6e-21 Score=165.56 Aligned_cols=242 Identities=11% Similarity=0.072 Sum_probs=178.4
Q ss_pred cEEEEEEcCCCCeEEE-EecCCeEEEEeccCCceeeeEEecC-----CceeEEEEeeCCcEEEEec------------CC
Q 047355 19 RVKSVDFHPTQPWVLA-SLYSGTVCIWNYHSQTTEKSVKVTD-----SPVRTAKFVAREHWIVCGS------------DD 80 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~g~------------~d 80 (312)
.+..++|+|+++++++ +..++.|.+||+.+.+....+.... ..+..+.|++++++++++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 5789999999987765 4567899999998887766665322 1466789999999998886 57
Q ss_pred CeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCc--cceEEEEeCCCCCC
Q 047355 81 KFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS--HYVMQSAFNPKDLN 158 (312)
Q Consensus 81 g~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~ 158 (312)
+.|.+||+.+++....+.. ...+.+++++|++++++++ ++.+.+||.... .....+..+. .. ..|+|.+..
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~-~~~~~~~~~~~~~~---~~~s~dg~~ 187 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAG-TLVEDKPIQSWEAE---TYAQPDVLA 187 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTT-EEEEEECSTTTTTT---TBCCCBCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCC-cEeeeeeccccCCC---ceeCCCccE
Confidence 9999999998877766654 4457889999999988877 688999998765 3333333322 22 256665433
Q ss_pred EEEEEeCCC-----------------------eEEEEEcCCCcce-eeecccccceeEEEEEEcCCceEEEEEeCCCeEE
Q 047355 159 TFASASLDG-----------------------TIQIWNMDSSAAK-FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVK 214 (312)
Q Consensus 159 ~~~s~s~dg-----------------------~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~ 214 (312)
+++++..++ .|.+||+.+.+.. ..+..+...+..+. +++++.+++++ ++.|.
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~s~dg~~l~~~--~~~v~ 263 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA--VNPAKTRAFGA--YNVLE 263 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEE--ECTTSSEEEEE--ESEEE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEE--ECCCCCEEEEe--CCeEE
Confidence 333333333 4789999887654 22333444455555 57889888887 79999
Q ss_pred EEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC
Q 047355 215 VWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 215 vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
+||+.+++.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+..+..+
T Consensus 264 ~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 264 SFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 999999988877764 346789999999999999999999999999998877666543
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=2.9e-20 Score=159.91 Aligned_cols=271 Identities=10% Similarity=0.051 Sum_probs=178.1
Q ss_pred CCCeEEEEe----cCCeEEEEeccC--CceeeeEEecCCceeEEEEeeCCcEEEEecCC----CeEEEEEccC--ce--e
Q 047355 28 TQPWVLASL----YSGTVCIWNYHS--QTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD----KFIRVFDYNT--MA--S 93 (312)
Q Consensus 28 ~~~~l~~~~----~dg~v~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~--~~--~ 93 (312)
...+++.|+ .++.|.+|.++. ++.......+......++|++++++|++++.+ +.|.+|+++. ++ .
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 334566664 457899998753 43332222245556678999999999998876 7999998865 32 2
Q ss_pred eeeecccccceeEEEEecCCCEEEEEe-CCCcEEEEeCCCCceee---e--EecC--------CccceEEEEeCCCCCCE
Q 047355 94 VKEFEAHEDYIRSLAVHPTFPFVLTAS-DDKLIKLWDWEKNWECT---Q--TFEG--------HSHYVMQSAFNPKDLNT 159 (312)
Q Consensus 94 ~~~~~~h~~~i~~~~~~~~~~~l~t~s-~d~~v~iwd~~~~~~~~---~--~~~~--------~~~~v~~~~~~~~~~~~ 159 (312)
+.....+......+++ +++++++++ .++.+.+|++....... . ...+ +...+..+.|+|.+..+
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 3333334555667777 777776665 68899999986432211 1 1111 12234668899855335
Q ss_pred EEEEeCCCeEEEEEcCCCcc------e-------eeecccccceeEEEEEEcCCceEEEEEe-CCCeEEEEeCCCCeEE-
Q 047355 160 FASASLDGTIQIWNMDSSAA------K-------FTLDAHEKGINCIDYFITSDKVYLITGS-DDFTVKVWDYETKTCV- 224 (312)
Q Consensus 160 ~~s~s~dg~v~iwd~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~- 224 (312)
+++...++.|++|++..... . .....+......+. ++++++++++++ .++.|.+|++.+++..
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~spdg~~l~v~~~~~~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLI--FNSDGKFAYLINEIGGTVIAFRYADGMLDE 247 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEE--ECTTSSEEEEEETTTCEEEEEEEETTEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEE--EcCCCCEEEEEcCCCCeEEEEEecCCceEE
Confidence 55555689999999875442 1 11122233445554 588998776666 6899999999877542
Q ss_pred -EEe---cccccCeEEEEEeCCCcEEEEEeCC--CcEEEEeCC--Ccc--eeeecccCccceEEEEEecCCCeEEEEe-c
Q 047355 225 -QIL---EGHTNNVTAVCFHPELRIIITASED--GTILIWNAT--TFR--LQNTLSSGLERVWSIGYKKGSNQVAFGC-D 293 (312)
Q Consensus 225 -~~~---~~h~~~i~~l~~~~~~~~l~s~s~d--g~v~iwd~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 293 (312)
..+ ..+......++|+|++++|+++..+ +.|.+|++. +++ ....+.. ...+..++|+|||+.|++++ .
T Consensus 248 ~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 248 IQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred eEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 222 2334457899999999988766654 899999985 344 3334433 45678999999999988887 6
Q ss_pred CCeEEEEecc
Q 047355 294 NGTLIVKIGN 303 (312)
Q Consensus 294 ~g~i~v~~~~ 303 (312)
++.+.++..+
T Consensus 327 ~~~v~v~~~d 336 (361)
T 3scy_A 327 TNVIQIFERD 336 (361)
T ss_dssp TTEEEEEEEC
T ss_pred CCCEEEEEEE
Confidence 7888886554
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=3.1e-20 Score=159.73 Aligned_cols=261 Identities=12% Similarity=0.116 Sum_probs=172.1
Q ss_pred ccCcEEEEEEcCCCCeEEEEecC----CeEEEEeccCC--ceee--eEEecCCceeEEEEeeCCcEEEEec-CCCeEEEE
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYS----GTVCIWNYHSQ--TTEK--SVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVF 86 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~--~~~~--~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iw 86 (312)
+......++|+|++++|++++.+ +.|.+|+++.. +... ....+......+.+ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 45567789999999999999886 89999998753 3222 22223334455555 778777766 67899999
Q ss_pred EccCceeeeeec--------------ccccceeEEEEecCCCEEEEEe-CCCcEEEEeCCCCce------e------eeE
Q 047355 87 DYNTMASVKEFE--------------AHEDYIRSLAVHPTFPFVLTAS-DDKLIKLWDWEKNWE------C------TQT 139 (312)
Q Consensus 87 d~~~~~~~~~~~--------------~h~~~i~~~~~~~~~~~l~t~s-~d~~v~iwd~~~~~~------~------~~~ 139 (312)
++.....+.... .+...+.+++++|+++++++++ .++.+++|++..... . ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 987543322111 1122357899999999766554 588999998864321 1 111
Q ss_pred ecCCccceEEEEeCCCCCCEEEEEe-CCCeEEEEEcCCCcce--eee---cccccceeEEEEEEcCCceEEEEEeC--CC
Q 047355 140 FEGHSHYVMQSAFNPKDLNTFASAS-LDGTIQIWNMDSSAAK--FTL---DAHEKGINCIDYFITSDKVYLITGSD--DF 211 (312)
Q Consensus 140 ~~~~~~~v~~~~~~~~~~~~~~s~s-~dg~v~iwd~~~~~~~--~~~---~~~~~~v~~~~~~~~~~~~~l~sg~~--dg 211 (312)
...+......+.|+|.+ ..+++++ .++.|.+||+.++... ..+ ..+......+. +++++++|+++.. ++
T Consensus 206 ~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~--~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH--LSPDGKYLYASNRLKAD 282 (361)
T ss_dssp ECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE--ECTTSSEEEEEECSSSC
T ss_pred ecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE--ECCCCCEEEEECCCCCC
Confidence 22333456778999854 5555555 6899999999865432 222 12223344444 6889998866554 58
Q ss_pred eEEEEeCC--CCe--EEEEecccccCeEEEEEeCCCcEEEEEe-CCCcEEEE--eCCCcceeeecc-cCccceEEEEEe
Q 047355 212 TVKVWDYE--TKT--CVQILEGHTNNVTAVCFHPELRIIITAS-EDGTILIW--NATTFRLQNTLS-SGLERVWSIGYK 282 (312)
Q Consensus 212 ~i~vwd~~--~~~--~~~~~~~h~~~i~~l~~~~~~~~l~s~s-~dg~v~iw--d~~~~~~~~~~~-~~~~~v~~~~~~ 282 (312)
.|.+|++. +++ .+..+.. ...+.+++|+|++++|++++ .++.|.+| |..++++..... .+...+.|+.|.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99999985 444 3444444 55688999999999888887 67899996 555676655432 244568888875
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=9.1e-21 Score=161.71 Aligned_cols=273 Identities=12% Similarity=0.067 Sum_probs=184.9
Q ss_pred EEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecC-CceeEEEEeeCCcEEE-EecCCCeEEEEEccCceeeeeecc
Q 047355 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD-SPVRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASVKEFEA 99 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~ 99 (312)
.+++++++..+++++.++.|++||..+++....+.... .....++|+++++.++ ++..++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 35678888999999999999999999887777776543 1467889999998665 556789999999998877766653
Q ss_pred c------ccceeEEEEecCCCEEEEEeCC------------CcEEEEeCCCCc--eeeeEecCCccceEEEEeCCCCCCE
Q 047355 100 H------EDYIRSLAVHPTFPFVLTASDD------------KLIKLWDWEKNW--ECTQTFEGHSHYVMQSAFNPKDLNT 159 (312)
Q Consensus 100 h------~~~i~~~~~~~~~~~l~t~s~d------------~~v~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~ 159 (312)
+ ...+..++++|+++++++++.+ +.|.+||+.+.. .....+.. ...+..+.|+|.+ .
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg-~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDG-S- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTS-C-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCC-c-
Confidence 2 2347889999999999988865 899999986532 11222332 2346677899865 4
Q ss_pred EEEEeCCCeEEEEEcCCCcceeeeccccc------------------------ceeEEEEEEcCCceEEEE-EeCCCeEE
Q 047355 160 FASASLDGTIQIWNMDSSAAKFTLDAHEK------------------------GINCIDYFITSDKVYLIT-GSDDFTVK 214 (312)
Q Consensus 160 ~~s~s~dg~v~iwd~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~~~l~s-g~~dg~i~ 214 (312)
+++++ +.|.+||+.+.+....+..+.. ....+.+ .+++..... ......+.
T Consensus 161 l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR--FKDDKQDPATADLLYGYL 236 (349)
T ss_dssp EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE--C-------CCCEEEEEEE
T ss_pred EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee--cCCCcCCccccccceeEE
Confidence 44443 3499999988876655543310 1111221 211100000 00001122
Q ss_pred EEeCCCCeEE-EEecccccCeEEEEEeC-CCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEe
Q 047355 215 VWDYETKTCV-QILEGHTNNVTAVCFHP-ELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 215 vwd~~~~~~~-~~~~~h~~~i~~l~~~~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
.+|..+++.. ..+..+...+.+++|+| ++++++++ ++.|.+||+.+++....+... ..+.+++|+|+++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEES
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEec
Confidence 2444443321 11223566788999999 99998888 889999999998877666533 4577999999999999988
Q ss_pred cCCeEEEEeccC
Q 047355 293 DNGTLIVKIGNS 304 (312)
Q Consensus 293 ~~g~i~v~~~~~ 304 (312)
.++.|.++-.++
T Consensus 314 ~~~~v~v~d~~~ 325 (349)
T 1jmx_B 314 TFNDLAVFNPDT 325 (349)
T ss_dssp BSSEEEEEETTT
T ss_pred CCCeEEEEeccc
Confidence 899999887653
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=5.2e-22 Score=181.62 Aligned_cols=233 Identities=6% Similarity=0.008 Sum_probs=171.4
Q ss_pred CCceeEEEEeeCCcEEEEecC-CCeEEEEEccCceeeeeecccc-cceeEEEEecCCCEEEEEeC---CCcEEEEeCCC-
Q 047355 59 DSPVRTAKFVAREHWIVCGSD-DKFIRVFDYNTMASVKEFEAHE-DYIRSLAVHPTFPFVLTASD---DKLIKLWDWEK- 132 (312)
Q Consensus 59 ~~~v~~~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~t~s~---d~~v~iwd~~~- 132 (312)
..++..+.|++||++|+.++. ||++++|++++++.. .+..|. ..+..++|+|+ +++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999998887 999999999776554 444444 68999999999 77777665 55667765533
Q ss_pred -CceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCC-
Q 047355 133 -NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD- 210 (312)
Q Consensus 133 -~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d- 210 (312)
..... .+..... .....|+|.+...+++.+.++.+.+||+.+++.......+. ..+ .++|||+++++++.+
T Consensus 99 ~~g~~~-~l~~~~~-~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~--~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 99 RPGEEQ-RLEAVKP-MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGF--VSDIRGDLIAGLGFFG 171 (582)
T ss_dssp STTCCE-ECTTSCS-BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEE--EEEEETTEEEEEEEEE
T ss_pred CCCccc-cccCCCC-ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceE--EECCCCCEEEEEEEcC
Confidence 21222 2222211 22346666554555555555556699998876554433322 344 357889999988777
Q ss_pred ---CeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCC--cEEEEeCCCcceeeecccCccceEEEE-----
Q 047355 211 ---FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG--TILIWNATTFRLQNTLSSGLERVWSIG----- 280 (312)
Q Consensus 211 ---g~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~----- 280 (312)
+.|++||+.+++.. .+..|...+..++|+|||++|+++..++ .|++||+.+++.. .+..+...+..++
T Consensus 172 ~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp TTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 78999999887755 5677888899999999999999888898 8999999988877 6666666666677
Q ss_pred ---EecCCCeEEEEecCCeEEEEec
Q 047355 281 ---YKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 281 ---~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
|+|||..+++++.+|+++++..
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999988889999999998875
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=4.3e-21 Score=169.12 Aligned_cols=237 Identities=14% Similarity=0.102 Sum_probs=166.3
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCc----------eee-----eEEecCCceeEEEEeeCCcEEE----Ee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQT----------TEK-----SVKVTDSPVRTAKFVAREHWIV----CG 77 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~----------~~~-----~~~~~~~~v~~~~~~~~~~~l~----~g 77 (312)
...++.+++++++.++++++.|+ +++|+..... ... ....+...+.+++|++++++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44689999999999999998888 8888753210 000 0112345799999999999999 89
Q ss_pred cCCCeEEEEEccCc--------e---eeeeecccccceeEEEEecC-CCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc
Q 047355 78 SDDKFIRVFDYNTM--------A---SVKEFEAHEDYIRSLAVHPT-FPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH 145 (312)
Q Consensus 78 ~~dg~i~iwd~~~~--------~---~~~~~~~h~~~i~~~~~~~~-~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~ 145 (312)
+.|+.|++||+.+. + ....+.+|...|.+++|+|+ +.++++++.||+|++||++.. .......+|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~~~~~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-VKVCATLPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-EEEEEEECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-cceeeccCCCC
Confidence 99999999998764 1 24556779999999999998 789999999999999999876 33445567888
Q ss_pred ceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeeccc-------ccceeEEEEEEcCCceEEEE-EeCCC------
Q 047355 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAH-------EKGINCIDYFITSDKVYLIT-GSDDF------ 211 (312)
Q Consensus 146 ~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s-g~~dg------ 211 (312)
.+.++.|+|. +.+|++++.||+|++||.+ ......+..| ...+.++.| .+++.++++ ...||
T Consensus 194 ~v~~v~wspd-g~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w--~~~~~~l~~~~~~dg~~~~~~ 269 (434)
T 2oit_A 194 AVTSVCWSPK-GKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW--IGTYVFAIVYAAADGTLETSP 269 (434)
T ss_dssp CEEEEEECTT-SSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE--EETTEEEEEEEETTCCSSSCC
T ss_pred ceeEEEEcCC-CCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE--ecCceEEEEEccCCCccCCCC
Confidence 9999999995 6899999999999999998 4444444333 225666665 456666644 33443
Q ss_pred eEEEEeCCCCe-----EEEEec-------ccccCeEEEEEeCCCcEEEEEeC-CCcEEEEe
Q 047355 212 TVKVWDYETKT-----CVQILE-------GHTNNVTAVCFHPELRIIITASE-DGTILIWN 259 (312)
Q Consensus 212 ~i~vwd~~~~~-----~~~~~~-------~h~~~i~~l~~~~~~~~l~s~s~-dg~v~iwd 259 (312)
.+++|+++..+ ....+. +.+.+-..+.+.++.+++++++. ...|.++.
T Consensus 270 ~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 270 DVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILA 330 (434)
T ss_dssp EEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEE
T ss_pred ceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEE
Confidence 38999987531 222221 12223334444466666655554 33455554
No 158
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=3.9e-20 Score=158.10 Aligned_cols=231 Identities=10% Similarity=0.089 Sum_probs=176.5
Q ss_pred cCcEEEEEEcCCCCeEEEE-ecCCeEEEEeccCCceeeeEEecCCc---------eeEEEEeeCCcEEEEec--CCCeEE
Q 047355 17 SDRVKSVDFHPTQPWVLAS-LYSGTVCIWNYHSQTTEKSVKVTDSP---------VRTAKFVAREHWIVCGS--DDKFIR 84 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~g~--~dg~i~ 84 (312)
...+..++|+|++++++++ ..++.|.+||..+++....+..+... ...+.|+++++++++++ .++.|.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 3457889999999976655 45799999999988877777654322 57789999999887765 478999
Q ss_pred EEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec----CCccceEEEEeCCCCCCEE
Q 047355 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE----GHSHYVMQSAFNPKDLNTF 160 (312)
Q Consensus 85 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~ 160 (312)
+||..+.+....+..+...+..++++|+++++++++.++.+.+||..... ....+. ++...+..+.|+|.+..++
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 99999998888887666678999999999999999999999999987653 333333 2455677889998654455
Q ss_pred EEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEE-EEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEE
Q 047355 161 ASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYL-ITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239 (312)
Q Consensus 161 ~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~ 239 (312)
++...++.|.+||+.+.+....+..... ..+. +++++.++ ++...++.|.+||..+++.+..+..+ ..+.+++|
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~--~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~ 321 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPES--LAVL--FNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLAL 321 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSC--CCEE--EETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEE--ECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEE
Confidence 5555669999999998877666654332 3343 46777754 45557999999999999988877644 46899999
Q ss_pred eCCCcEEEEEeCCC
Q 047355 240 HPELRIIITASEDG 253 (312)
Q Consensus 240 ~~~~~~l~s~s~dg 253 (312)
+|++++|+.+..++
T Consensus 322 s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 322 SADGKTLYVSVKQK 335 (353)
T ss_dssp CTTSCEEEEEEECC
T ss_pred cCCCCEEEEEEccc
Confidence 99999776666553
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=2.4e-21 Score=168.08 Aligned_cols=285 Identities=10% Similarity=0.060 Sum_probs=189.1
Q ss_pred hhhcccCcEEE-----EEEcCCCCeEEEEec-CCe--EEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeE
Q 047355 12 EFIQKSDRVKS-----VDFHPTQPWVLASLY-SGT--VCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFI 83 (312)
Q Consensus 12 ~~~~~~~~i~~-----~~~~~~~~~l~~~~~-dg~--v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i 83 (312)
++..+...... .+|+|||++|+.++. +|. |.+||+.+++.......+...+....|+|+++.|+.++.++.|
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL 104 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence 34444445555 789999999998887 674 7888888777665555554445467899999999999999999
Q ss_pred EEEEccCceeeeeecccccceeEEE--EecCCCEEEEE----------------------eCCCcEEEEeCCCCceeeeE
Q 047355 84 RVFDYNTMASVKEFEAHEDYIRSLA--VHPTFPFVLTA----------------------SDDKLIKLWDWEKNWECTQT 139 (312)
Q Consensus 84 ~iwd~~~~~~~~~~~~h~~~i~~~~--~~~~~~~l~t~----------------------s~d~~v~iwd~~~~~~~~~~ 139 (312)
++||+.+++....+..+...+.... ++|++++++.. +.+..|.+||+.+.. ...
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~ 182 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STV 182 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEE
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eEE
Confidence 9999999877666666665554433 48899887642 244678999987653 233
Q ss_pred ecCCccceEEEEeCCCCCCEEEEEeCC------CeEEEEEcCCCcceeeeccccc--ceeEEEEEEcCCceEEEEEeC-C
Q 047355 140 FEGHSHYVMQSAFNPKDLNTFASASLD------GTIQIWNMDSSAAKFTLDAHEK--GINCIDYFITSDKVYLITGSD-D 210 (312)
Q Consensus 140 ~~~~~~~v~~~~~~~~~~~~~~s~s~d------g~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~sg~~-d 210 (312)
+..+...+....|+|.++..++..+.+ ..|.++|....... .+..+.. .+... .++|||..|+..+. +
T Consensus 183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~--~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHE--FWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEE--EECTTSSCEEEEEEET
T ss_pred eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccc--eECCCCCEEEEEecCC
Confidence 334556678889998334566665543 37888887665443 3333332 34444 36888886655332 2
Q ss_pred C----eEEEEeCCCCeEEE--EecccccC---eEEEEEeCCCcEEEEE---------eCCCcEEEEeCCCcceeeecccC
Q 047355 211 F----TVKVWDYETKTCVQ--ILEGHTNN---VTAVCFHPELRIIITA---------SEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 211 g----~i~vwd~~~~~~~~--~~~~h~~~---i~~l~~~~~~~~l~s~---------s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
+ .|++||+.+++... .+.++... ...++|+|+++.|+.. ..+..|++||+.+++.. .+..+
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~ 338 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARH 338 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE-EEEEC
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE-Eeccc
Confidence 2 39999999887433 23321110 1223799999987754 45678999999886653 33334
Q ss_pred cc-----------ceEEEEEecCCCeEEEEec-CCeEEEEec
Q 047355 273 LE-----------RVWSIGYKKGSNQVAFGCD-NGTLIVKIG 302 (312)
Q Consensus 273 ~~-----------~v~~~~~~~~~~~l~~~~~-~g~i~v~~~ 302 (312)
.. .+..++|+|||+.|++.++ +|...|+.-
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 33 4778899999999998775 666665543
No 160
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=3e-19 Score=153.70 Aligned_cols=252 Identities=12% Similarity=0.147 Sum_probs=173.4
Q ss_pred CCCCeEEEEe------cCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecC----------CCeEEEEEccC
Q 047355 27 PTQPWVLASL------YSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD----------DKFIRVFDYNT 90 (312)
Q Consensus 27 ~~~~~l~~~~------~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~----------dg~i~iwd~~~ 90 (312)
++++++++.. .|+.|.+||..+.+....+.....+ .++|++++++++++.. ++.|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3566666653 4789999999888877776655545 8899999999998863 67899999998
Q ss_pred ceeeeeeccc------ccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeE-ecCCccceEEEEeCCCCCCEEE
Q 047355 91 MASVKEFEAH------EDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQT-FEGHSHYVMQSAFNPKDLNTFA 161 (312)
Q Consensus 91 ~~~~~~~~~h------~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 161 (312)
.+....+..+ ......++++|++++|+++.. ++.|.+||+... +.... +.... ...+.+.|.+...++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~-~~~~~~i~~~~--~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG-DYVEDVTAAAG--CWSVIPQPNRPRSFM 167 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT-EEEEEEGGGTT--EEEEEECTTSSSEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC-cEEEEEecCCC--cceeEEcCCCCeeEE
Confidence 8877776532 244677999999999988764 689999998865 33333 22111 111234444444556
Q ss_pred EEeCCCeEEEEEcCC-Cccee------eec--------------------ccccceeEEE--------------------
Q 047355 162 SASLDGTIQIWNMDS-SAAKF------TLD--------------------AHEKGINCID-------------------- 194 (312)
Q Consensus 162 s~s~dg~v~iwd~~~-~~~~~------~~~--------------------~~~~~v~~~~-------------------- 194 (312)
+.+.||++.+|++.. ++... .+. .+...+..++
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 666666666665543 11110 000 0000000000
Q ss_pred -----------EEEcCCceEEEEEeC-----------CCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCC
Q 047355 195 -----------YFITSDKVYLITGSD-----------DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252 (312)
Q Consensus 195 -----------~~~~~~~~~l~sg~~-----------dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d 252 (312)
+.+++++..+..... ++.|.+||+.+++.+..+..+. +.+++|+|++++|++++.
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~- 324 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG- 324 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-
Confidence 123556444444332 3489999999999999998777 899999999999998887
Q ss_pred CcEEEEeCCCc--ceeeecccCccceEEEEEecCCC
Q 047355 253 GTILIWNATTF--RLQNTLSSGLERVWSIGYKKGSN 286 (312)
Q Consensus 253 g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 286 (312)
+.|.+||..++ +.+.++.......+.++++|+|.
T Consensus 325 ~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999999 88888766777889999999985
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.2e-18 Score=150.13 Aligned_cols=269 Identities=12% Similarity=0.094 Sum_probs=174.7
Q ss_pred eEEEEecC--CeEEEEecc--CCceeeeEEe---cCCceeEEEEeeCCcEEEEecCCCeEEEEEcc-Cceeeeeeccc-c
Q 047355 31 WVLASLYS--GTVCIWNYH--SQTTEKSVKV---TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN-TMASVKEFEAH-E 101 (312)
Q Consensus 31 ~l~~~~~d--g~v~iw~~~--~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h-~ 101 (312)
++++|+.. +.|.+|+++ +++....... .......++|++++++|++++.+ .|.+|+++ +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35566653 568887764 3332211111 22357789999999999999888 99999997 66544332211 1
Q ss_pred cceeEEEEecCCCE--EEEEe-------------CCCcEEEEeCCCCceeeeEec----CCccceEEEEeCCCCCCEEEE
Q 047355 102 DYIRSLAVHPTFPF--VLTAS-------------DDKLIKLWDWEKNWECTQTFE----GHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 102 ~~i~~~~~~~~~~~--l~t~s-------------~d~~v~iwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~s 162 (312)
+....++++|++++ +++++ .++.+.+|++.........+. .+...+..+.|+|.+ ..+++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~ 161 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYS 161 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEE
Confidence 23556889999984 44553 689999999864323222222 244567889999954 55665
Q ss_pred Ee-CCCeEEEEEcC-CCccee--eec--ccccceeEEEEEEcCCceEEEEEeC-CCeEEEEeCC--CCeEE---E---Ee
Q 047355 163 AS-LDGTIQIWNMD-SSAAKF--TLD--AHEKGINCIDYFITSDKVYLITGSD-DFTVKVWDYE--TKTCV---Q---IL 227 (312)
Q Consensus 163 ~s-~dg~v~iwd~~-~~~~~~--~~~--~~~~~v~~~~~~~~~~~~~l~sg~~-dg~i~vwd~~--~~~~~---~---~~ 227 (312)
+. .++.|++||+. +++... .+. .|...+..+. ++++++++++++. ++.|.+|+.. +++.. . .+
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~--~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA--MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE--ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE--ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 54 46899999998 554322 222 1234455555 5889988877664 7899999764 45542 1 22
Q ss_pred c----cccc------CeEEEE-EeCCCcEEEEEeCCC------cEEEEeCC-Ccceee---ecccCccceEEEEEec---
Q 047355 228 E----GHTN------NVTAVC-FHPELRIIITASEDG------TILIWNAT-TFRLQN---TLSSGLERVWSIGYKK--- 283 (312)
Q Consensus 228 ~----~h~~------~i~~l~-~~~~~~~l~s~s~dg------~v~iwd~~-~~~~~~---~~~~~~~~v~~~~~~~--- 283 (312)
. +|.. .+..++ |+|++++|+++..+. .|.+|++. ++++.. ....+...+..++|+|
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~ 319 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW 319 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCc
Confidence 2 1222 588999 999999887765432 89999985 555543 1223344566889999
Q ss_pred CCCeEEEEec-CCeEEEEecc
Q 047355 284 GSNQVAFGCD-NGTLIVKIGN 303 (312)
Q Consensus 284 ~~~~l~~~~~-~g~i~v~~~~ 303 (312)
||++|++++. +++|.|+-.+
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEEEc
Confidence 8999998886 4888887554
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=5.3e-19 Score=152.41 Aligned_cols=243 Identities=9% Similarity=0.057 Sum_probs=164.5
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEecc-CCceeeeEEec-CCceeEEEEeeCCcE--EEEec-------------CC
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYH-SQTTEKSVKVT-DSPVRTAKFVAREHW--IVCGS-------------DD 80 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~g~-------------~d 80 (312)
..+..++|+|++++|++++.+ .|.+|+++ +++........ .+....+.|+|++++ ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 467899999999999999888 99999987 55544333221 122445788999984 55664 68
Q ss_pred CeEEEEEccC-ceeeeeec----ccccceeEEEEecCCCEEEEEeC-CCcEEEEeCC-CCce-eeeEec--CCccceEEE
Q 047355 81 KFIRVFDYNT-MASVKEFE----AHEDYIRSLAVHPTFPFVLTASD-DKLIKLWDWE-KNWE-CTQTFE--GHSHYVMQS 150 (312)
Q Consensus 81 g~i~iwd~~~-~~~~~~~~----~h~~~i~~~~~~~~~~~l~t~s~-d~~v~iwd~~-~~~~-~~~~~~--~~~~~v~~~ 150 (312)
+.+.+|+++. ++....+. .+...+.+++|+|++++++++.. ++.|++||+. .... ....+. .+...+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 9999999973 44433332 24567899999999998877654 6799999987 3322 122232 234567888
Q ss_pred EeCCCCCCEEEEEe-CCCeEEEEEcCC--Cccee---e---ecc----ccc------ceeEEEEEEcCCceEEEEEeCC-
Q 047355 151 AFNPKDLNTFASAS-LDGTIQIWNMDS--SAAKF---T---LDA----HEK------GINCIDYFITSDKVYLITGSDD- 210 (312)
Q Consensus 151 ~~~~~~~~~~~s~s-~dg~v~iwd~~~--~~~~~---~---~~~----~~~------~v~~~~~~~~~~~~~l~sg~~d- 210 (312)
.|+|. +..+++++ .+++|.+|+++. ++... . +.. |.. .+..+.+ +++||++|+++..+
T Consensus 199 ~~spd-g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 199 AMHPT-GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCA-LTFSGKYMFASSRAN 276 (365)
T ss_dssp EECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEE-ECTTSSEEEEEEEES
T ss_pred EECCC-CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEE-ECCCCCEEEEECCCC
Confidence 99985 45666555 478999998763 33221 1 111 111 2444441 58899887766543
Q ss_pred C-----eEEEEeCC-CCeEEE---EecccccCeEEEEEeC---CCcEEEEEeCC-CcEEEEeCCCc
Q 047355 211 F-----TVKVWDYE-TKTCVQ---ILEGHTNNVTAVCFHP---ELRIIITASED-GTILIWNATTF 263 (312)
Q Consensus 211 g-----~i~vwd~~-~~~~~~---~~~~h~~~i~~l~~~~---~~~~l~s~s~d-g~v~iwd~~~~ 263 (312)
. .|.+|++. +++... ....+...+..++|+| ++++|++++.+ +.|++|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 89999985 566543 2333555677899999 89999998875 89999987654
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=2.1e-19 Score=168.82 Aligned_cols=269 Identities=10% Similarity=0.096 Sum_probs=183.3
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCc-----eeEEEEeeCCcEEEEecCC---------Ce
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP-----VRTAKFVAREHWIVCGSDD---------KF 82 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~g~~d---------g~ 82 (312)
.....+++|+||+++++++ ||+|++||+.+++....+..+... .....|+||+++|+.++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3457799999999888886 999999999988776666555422 2347889999999998876 56
Q ss_pred EEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccce---------------
Q 047355 83 IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV--------------- 147 (312)
Q Consensus 83 i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v--------------- 147 (312)
+.+||+.+++.. .+..|...+...+|+|+|+.|+.+. |+.|.+||.........+..++...+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 679999988654 4667778899999999999999885 68999999876533222233333222
Q ss_pred --EEEEeCCCCCCEEEEEeCCC------------------------------------eEEEEEcCC---Cc--ceeeec
Q 047355 148 --MQSAFNPKDLNTFASASLDG------------------------------------TIQIWNMDS---SA--AKFTLD 184 (312)
Q Consensus 148 --~~~~~~~~~~~~~~s~s~dg------------------------------------~v~iwd~~~---~~--~~~~~~ 184 (312)
..+.|+|. +..++..+.|. +|++||+.+ +. ....+.
T Consensus 172 ~~~~~~wSpD-g~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 172 AYSALWWSPN-GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSBCEEECTT-SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCcceEECCC-CCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 23679984 56777665322 478889887 62 222332
Q ss_pred ------ccccceeEEEEEEcCCceEEEEEeC----CCeEEEEeCCCCe----EEEE--e--cccccCeE-----EEEEeC
Q 047355 185 ------AHEKGINCIDYFITSDKVYLITGSD----DFTVKVWDYETKT----CVQI--L--EGHTNNVT-----AVCFHP 241 (312)
Q Consensus 185 ------~~~~~v~~~~~~~~~~~~~l~sg~~----dg~i~vwd~~~~~----~~~~--~--~~h~~~i~-----~l~~~~ 241 (312)
+|...+..+.| +||++.++.... +..|.+||+.+++ +... + .+|...|. ..+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~w--spdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTW--ATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp CCHHHHTSCEEEEEEEE--EETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred CCccCCCCCeEEEEEEE--eCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 25555666665 567876655432 3479999998876 2211 1 34665554 789999
Q ss_pred CCcEEE-EEeC-C--CcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecC
Q 047355 242 ELRIII-TASE-D--GTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 242 ~~~~l~-s~s~-d--g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 294 (312)
|++.|+ ..+. + ..|++||..+.+.. .+......|..+. .+|++.|++.+..
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~-~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIE-ALTSDYLYYISNE 383 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEE-EECSSEEEEEESC
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEE-EEeCCEEEEEEec
Confidence 999877 6664 3 35888898765544 3444445555543 3567877766654
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.85 E-value=8.5e-19 Score=162.65 Aligned_cols=286 Identities=10% Similarity=0.039 Sum_probs=191.6
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEEE--ecCCeEEEEeccCCceeeeEEecCCcee---------EEEEe--eCCcE-EEE
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLAS--LYSGTVCIWNYHSQTTEKSVKVTDSPVR---------TAKFV--AREHW-IVC 76 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~~--~~dg~v~iw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~ 76 (312)
+.+.+|...+..++|++++-+++.. ..++...||........+.+..+...+. ...|+ ||++. |+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 3466788899999999886666666 5588999998643333444444444444 45565 88888 665
Q ss_pred ec-CCCeEEEEEcc--Cceeeeeecc-----cccceeEEEEecCCCEEEEEeCC----------CcEEEEeCCCC-----
Q 047355 77 GS-DDKFIRVFDYN--TMASVKEFEA-----HEDYIRSLAVHPTFPFVLTASDD----------KLIKLWDWEKN----- 133 (312)
Q Consensus 77 g~-~dg~i~iwd~~--~~~~~~~~~~-----h~~~i~~~~~~~~~~~l~t~s~d----------~~v~iwd~~~~----- 133 (312)
++ .+..|.++++. +......+.. |...+.+++|+|+++.|++++.+ ..|++||+...
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 54 35677777765 2023344544 67788999999999999988876 58999998761
Q ss_pred ceeeeEec-CCccceEEEEeCCCCCCEEEEEeCC--------CeEEEEEcC-CC---cceeeecccccceeEEEEEEcCC
Q 047355 134 WECTQTFE-GHSHYVMQSAFNPKDLNTFASASLD--------GTIQIWNMD-SS---AAKFTLDAHEKGINCIDYFITSD 200 (312)
Q Consensus 134 ~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~d--------g~v~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~ 200 (312)
.. ...+. .+...+....|+|. +..++..+.+ ..|++||+. ++ +.......+...+..+. +++|
T Consensus 177 ~~-~~~l~~~~~~~~~~~~~SpD-G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~--~spd 252 (662)
T 3azo_A 177 SA-VRELSDDAHRFVTGPRLSPD-GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAE--WAPD 252 (662)
T ss_dssp GG-SEESSCSCSSEECCCEECTT-SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEE--ECTT
T ss_pred Cc-eeEEEecCCCcccCceECCC-CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceE--ECCC
Confidence 12 23344 45566777889984 5777766654 379999998 45 33333334456666665 4788
Q ss_pred ceEEEEEeCCC--eEEEEeCCCCeEEEEecccccC--------eEEEEEeCCCcEEEEEeCCCcEEEE--eCCCcceeee
Q 047355 201 KVYLITGSDDF--TVKVWDYETKTCVQILEGHTNN--------VTAVCFHPELRIIITASEDGTILIW--NATTFRLQNT 268 (312)
Q Consensus 201 ~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~--------i~~l~~~~~~~~l~s~s~dg~v~iw--d~~~~~~~~~ 268 (312)
|.+++++..++ .|.+||..+++.......+... +..++|+|+++++++++. +.++|| |..+++ ...
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~ 330 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVD 330 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEE
Confidence 88888888888 6777777677766555544332 568999999999999999 999999 655554 456
Q ss_pred cccCccceEEE-EEecCCCeEEEEecCCeEEEEec
Q 047355 269 LSSGLERVWSI-GYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 269 ~~~~~~~v~~~-~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
+..+...+..+ +++++.-.+++++.+....|+..
T Consensus 331 l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 331 AAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp CCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred ecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 66666666666 44333333444455554555543
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=7.1e-20 Score=171.48 Aligned_cols=266 Identities=9% Similarity=0.037 Sum_probs=181.2
Q ss_pred cEEEEEEcCCCCeEEEEec---------CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 19 RVKSVDFHPTQPWVLASLY---------SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~---------dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
.+.+++|+|||++|+.++. ++.|++||+++++....... ...+..++|+|+|++|+.+. ++.|++|++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 3889999999999998876 78999999988765211111 24578899999999999885 6899999998
Q ss_pred Cceeeeee-cccccce-----------------eEEEEecCCCEEEEEeCCC----------------------------
Q 047355 90 TMASVKEF-EAHEDYI-----------------RSLAVHPTFPFVLTASDDK---------------------------- 123 (312)
Q Consensus 90 ~~~~~~~~-~~h~~~i-----------------~~~~~~~~~~~l~t~s~d~---------------------------- 123 (312)
+++..+.. .++...| .+++|+|+++.|++++.|.
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 77654322 2332222 4899999999999887652
Q ss_pred ------cEEEEeCCCCcee----e---eEecCCccceEEEEeCCCCCCEEEEEeCC----CeEEEEE----cCCCcceee
Q 047355 124 ------LIKLWDWEKNWEC----T---QTFEGHSHYVMQSAFNPKDLNTFASASLD----GTIQIWN----MDSSAAKFT 182 (312)
Q Consensus 124 ------~v~iwd~~~~~~~----~---~~~~~~~~~v~~~~~~~~~~~~~~s~s~d----g~v~iwd----~~~~~~~~~ 182 (312)
.+++||+...... + ..+.+|...+..+.|+|. +.++++.... ..|.+|| +.+++....
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 7889998764321 0 123467788899999996 4555554322 2488899 766655444
Q ss_pred e----ccccccee-----EEEEEEcCCceEEE--EEeCCC--eEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEE
Q 047355 183 L----DAHEKGIN-----CIDYFITSDKVYLI--TGSDDF--TVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITA 249 (312)
Q Consensus 183 ~----~~~~~~v~-----~~~~~~~~~~~~l~--sg~~dg--~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~ 249 (312)
+ ..|...+. .+. +++||..++ +...+| .|.+||..+++ ...+..+...+..+.+. +++.|+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~--~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~ 373 (719)
T 1z68_A 298 QEHIEESRTGWAGGFFVSTPV--FSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYS 373 (719)
T ss_dssp GEEEEECSSSCSSSSSCCCCE--ECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEE
T ss_pred EecccccCCceEccccCCccE--ECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEE
Confidence 4 35555454 444 467877443 444555 57777887666 44555566678888888 77776666
Q ss_pred eCC-----CcEEEEeCCC--cce-eeecc----cCccceEEEEEecCCCeEEEE
Q 047355 250 SED-----GTILIWNATT--FRL-QNTLS----SGLERVWSIGYKKGSNQVAFG 291 (312)
Q Consensus 250 s~d-----g~v~iwd~~~--~~~-~~~~~----~~~~~v~~~~~~~~~~~l~~~ 291 (312)
+.+ +..++|.+.. +.. ...+. .+...+..+.|+|+++.|+..
T Consensus 374 ~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 374 SNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp ESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred EecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence 654 8889997653 321 12222 244567889999999988854
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=5.8e-18 Score=143.85 Aligned_cols=241 Identities=11% Similarity=0.065 Sum_probs=181.8
Q ss_pred CceeEEEEeeCCcEEEEecCC------------------------CeEEEEEccCceeeeeec-ccccceeEEEEecCCC
Q 047355 60 SPVRTAKFVAREHWIVCGSDD------------------------KFIRVFDYNTMASVKEFE-AHEDYIRSLAVHPTFP 114 (312)
Q Consensus 60 ~~v~~~~~~~~~~~l~~g~~d------------------------g~i~iwd~~~~~~~~~~~-~h~~~i~~~~~~~~~~ 114 (312)
..+..+++.++++.+++...+ +.|.+||..+++....+. .+-.....++++|+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 467888999999888887776 479999998877765554 3445688999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeeEe---------cCCccceEEEEeCCCCCCEEEEEe-CCCeEEEEEcCCCcceeeec
Q 047355 115 FVLTASDDKLIKLWDWEKNWECTQTF---------EGHSHYVMQSAFNPKDLNTFASAS-LDGTIQIWNMDSSAAKFTLD 184 (312)
Q Consensus 115 ~l~t~s~d~~v~iwd~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~s~s-~dg~v~iwd~~~~~~~~~~~ 184 (312)
++++...++.|++||..........+ ..+......++++|.++.++++.+ .++.|++||. .+.....+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEec
Confidence 88888889999999976542233333 234446788999986667888886 6999999994 444444442
Q ss_pred c----------cccceeEEEEEEcCC-ceEEEEEeCCCeEEEEeCCCCeEEEEec--ccccCeEEEEEeCCCcEEEEEe-
Q 047355 185 A----------HEKGINCIDYFITSD-KVYLITGSDDFTVKVWDYETKTCVQILE--GHTNNVTAVCFHPELRIIITAS- 250 (312)
Q Consensus 185 ~----------~~~~v~~~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~i~~l~~~~~~~~l~s~s- 250 (312)
. +......++ ++++ +.++++...++.|++||..+++.+..+. .+...+.+++|+| +..+++.+
T Consensus 183 ~~g~~~~~~~~~~~~p~gia--~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLA--LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp EECCSSSCCTTEESCEEEEE--EETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred cCCCCCCCCCcccCCCcEEE--EECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 2 112245555 4566 8888898899999999998888888774 4567789999999 44444433
Q ss_pred ------CCCcEEEEeCCCcceeeecc---cCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 251 ------EDGTILIWNATTFRLQNTLS---SGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 251 ------~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
.+..|++|+..+++++..+. .+...+..++++|+|+.+++...+++|+++-.+.
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 34589999999998888774 5667799999999999999999999998876654
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=1.4e-19 Score=157.13 Aligned_cols=274 Identities=12% Similarity=0.039 Sum_probs=177.1
Q ss_pred EEEEEEcCCCCeEEEEecC---CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 20 VKSVDFHPTQPWVLASLYS---GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 20 i~~~~~~~~~~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
+..++|+|||++|+..... ..|.+||+.+++................|+|++++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6778999999998876543 3688889877654433222222222367999999999999999999999988765544
Q ss_pred ecccccceeE-------------------EEEecCCCEEEEE-----eCCCcEEEEeCCCCceeeeEecCCccceEEEEe
Q 047355 97 FEAHEDYIRS-------------------LAVHPTFPFVLTA-----SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152 (312)
Q Consensus 97 ~~~h~~~i~~-------------------~~~~~~~~~l~t~-----s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~ 152 (312)
...+...... +.++|+++.++.. ..+..+.+||+..... . .+..+...+....|
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~-~-~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL-E-VIHQDTAWLGHPIY 195 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE-E-EEEEESSCEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE-E-eeccCCcccccceE
Confidence 4434332222 2456666665543 3566899999876432 2 22235556778889
Q ss_pred CCCCCCEEEEEeCC------CeEEEEEcCCCcceeeecccc--cceeEEEEEEcCCceEEEEEeCC-----CeEEEEeCC
Q 047355 153 NPKDLNTFASASLD------GTIQIWNMDSSAAKFTLDAHE--KGINCIDYFITSDKVYLITGSDD-----FTVKVWDYE 219 (312)
Q Consensus 153 ~~~~~~~~~s~s~d------g~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~ 219 (312)
+|.++..++..+.+ ..|.+||+.......... +. ..+..+. +++++.+|+..+.+ +.|++||+.
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~--~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEF--WIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEE--ECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceE--ECCCCCEEEEEecCCCCccceEEEEECC
Confidence 98444555555543 368888887654333222 22 2344444 57888877666543 459999998
Q ss_pred CCeEEEEecccccCeEEEEEeC-CCcEEEEEe----------------CCCcEEEEeCCCcceeeecccCcc--------
Q 047355 220 TKTCVQILEGHTNNVTAVCFHP-ELRIIITAS----------------EDGTILIWNATTFRLQNTLSSGLE-------- 274 (312)
Q Consensus 220 ~~~~~~~~~~h~~~i~~l~~~~-~~~~l~s~s----------------~dg~v~iwd~~~~~~~~~~~~~~~-------- 274 (312)
+++....... . ... +.|+| +++++++++ .+..|++||+.+++.. .+..+..
T Consensus 273 ~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~ 348 (396)
T 3c5m_A 273 TLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGD 348 (396)
T ss_dssp TCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTB
T ss_pred CCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCcccccccc
Confidence 8765443321 1 233 89999 999888765 3478999999876643 2333322
Q ss_pred ---ceEEEEEecCCCeEEEEec-CCeEEEEec
Q 047355 275 ---RVWSIGYKKGSNQVAFGCD-NGTLIVKIG 302 (312)
Q Consensus 275 ---~v~~~~~~~~~~~l~~~~~-~g~i~v~~~ 302 (312)
.+..+.|+|||+.|++++. ++...|+.-
T Consensus 349 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 349 RQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp SSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 2556789999999998876 555555543
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=8.5e-18 Score=142.80 Aligned_cols=241 Identities=11% Similarity=0.103 Sum_probs=178.1
Q ss_pred cCcEEEEEEcCCCCeEEEEecC------------------------CeEEEEeccCCceeeeEEe-cCCceeEEEEeeCC
Q 047355 17 SDRVKSVDFHPTQPWVLASLYS------------------------GTVCIWNYHSQTTEKSVKV-TDSPVRTAKFVARE 71 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~d------------------------g~v~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 71 (312)
-..+.+++++|+|+.+++...+ ++|.+||..+++....+.. .-.....+++.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988877776 4799999987776554431 22356788999999
Q ss_pred cEEEEecCCCeEEEEEccCce-eeeee---------cccccceeEEEEec-CCCEEEEEe-CCCcEEEEeCCCCceeeeE
Q 047355 72 HWIVCGSDDKFIRVFDYNTMA-SVKEF---------EAHEDYIRSLAVHP-TFPFVLTAS-DDKLIKLWDWEKNWECTQT 139 (312)
Q Consensus 72 ~~l~~g~~dg~i~iwd~~~~~-~~~~~---------~~h~~~i~~~~~~~-~~~~l~t~s-~d~~v~iwd~~~~~~~~~~ 139 (312)
+.+++...++.|++|+.+... .+..+ ..+-.....++++| ++.++++.+ .++.|++||... .....
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g--~~~~~ 180 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG--KFVTQ 180 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS--CEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC--CEEEE
Confidence 988888889999999986542 34444 23444688999999 788777776 689999999543 22333
Q ss_pred ec----------CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeec--ccccceeEEEEEEcCCceEEEEE
Q 047355 140 FE----------GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD--AHEKGINCIDYFITSDKVYLITG 207 (312)
Q Consensus 140 ~~----------~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~sg 207 (312)
+. ++-.....++++|..+.++++...+++|++||..+++....+. .+...+..+.+ .| +..+++.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~p-g~~~~~~ 257 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISY--IP-GFLFAVN 257 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEE--ET-TEEEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeee--cC-CEEEEeC
Confidence 32 1223467888998656788888889999999998777666653 33344555543 44 4444433
Q ss_pred -------eCCCeEEEEeCCCCeEEEEec---ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 208 -------SDDFTVKVWDYETKTCVQILE---GHTNNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 208 -------~~dg~i~vwd~~~~~~~~~~~---~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
..+..|++||..+++.+..+. ++...+.+|+++|++.++++...++.|++|++..
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 334589999999999888873 5677799999999999999999999999999753
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=4e-18 Score=145.24 Aligned_cols=233 Identities=9% Similarity=0.016 Sum_probs=156.8
Q ss_pred cEEEEEEcCCCCeEEE-EecCCeEEEEeccCCceeeeEEecCC------ceeEEEEeeCCcEEEEecCC-----------
Q 047355 19 RVKSVDFHPTQPWVLA-SLYSGTVCIWNYHSQTTEKSVKVTDS------PVRTAKFVAREHWIVCGSDD----------- 80 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~g~~d----------- 80 (312)
.+..++|+|+++++++ ...++.|.+||+.+.+....+..... .+..+.|+++++++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 5789999999987664 45689999999988777666654321 26788999999999998865
Q ss_pred -CeEEEEEccCcee---eeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCc------------
Q 047355 81 -KFIRVFDYNTMAS---VKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS------------ 144 (312)
Q Consensus 81 -g~i~iwd~~~~~~---~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~------------ 144 (312)
+.|.+||+.+++. ...+. +...+.+++++|+++ +++++. .+.+||..+.. ....+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGK-YTVALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCC-EEEEECSTTCCCTTBCCCBCC
T ss_pred CCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCc-eeccccccccCCccccCccce
Confidence 8999999987443 23333 334688999999999 555543 49999987653 233332221
Q ss_pred ---------c---ceEEEEeCCCCC----------CEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcC-Cc
Q 047355 145 ---------H---YVMQSAFNPKDL----------NTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS-DK 201 (312)
Q Consensus 145 ---------~---~v~~~~~~~~~~----------~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 201 (312)
. ....+.+.+.+. .++.....++.+++|++. .+...+..+. +++ ++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~--~sp~dg 267 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA---------DLTELYFTGL--RSPKDP 267 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE---------ECSSCEEEEE--ECSSCT
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc---------cCCCcceeeE--ecCCCC
Confidence 0 112233332110 011112223334444331 1223334443 578 88
Q ss_pred eEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecc
Q 047355 202 VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270 (312)
Q Consensus 202 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 270 (312)
.+++++ ++.|.+||+.+++.+..+.. ...+.+++|+|++++|++++.++.|++||..+++.+..+.
T Consensus 268 ~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 268 NQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp TEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred CEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 888877 88999999999988877763 3457899999999988888889999999999888766554
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=7e-17 Score=134.18 Aligned_cols=237 Identities=13% Similarity=0.152 Sum_probs=168.2
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe------cCCceeEEEEe-eCCcEEEEecC-CCeEEEEE
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV------TDSPVRTAKFV-AREHWIVCGSD-DKFIRVFD 87 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~g~~-dg~i~iwd 87 (312)
+-....+++++|++..+++...++.|.+||.+ .+....+.. +......+++. +++..+++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 34679999999999888887889999999987 444444432 11346678885 55655555533 78999999
Q ss_pred ccCceeeeeec-ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec--CCccceEEEEeCCCCCCEEEEEe
Q 047355 88 YNTMASVKEFE-AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE--GHSHYVMQSAFNPKDLNTFASAS 164 (312)
Q Consensus 88 ~~~~~~~~~~~-~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~s 164 (312)
. +++....+. .+...+..++++|+++++++...++.|.+||.... ....+. .+...+..+.++|. +.++++.+
T Consensus 107 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~ 182 (286)
T 1q7f_A 107 Q-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDK-QEIFISDN 182 (286)
T ss_dssp T-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSS-SEEEEEEG
T ss_pred C-CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC--EEEEeCCCCccCCcEEEEECCC-CCEEEEEC
Confidence 4 455555553 33456889999999998888788899999996532 233332 34456788899985 46777777
Q ss_pred CCCeEEEEEcCCCcceeeeccc--ccceeEEEEEEcCCceEEEEEeCCC-eEEEEeCCCCeEEEEeccccc--CeEEEEE
Q 047355 165 LDGTIQIWNMDSSAAKFTLDAH--EKGINCIDYFITSDKVYLITGSDDF-TVKVWDYETKTCVQILEGHTN--NVTAVCF 239 (312)
Q Consensus 165 ~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~sg~~dg-~i~vwd~~~~~~~~~~~~h~~--~i~~l~~ 239 (312)
.++.|++||... .....+..+ ...+..++ .++++.++++...++ .|.+||. +++.+..+..+.. .+.++++
T Consensus 183 ~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~--~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 183 RAHCVKVFNYEG-QYLRQIGGEGITNYPIGVG--INSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp GGTEEEEEETTC-CEEEEESCTTTSCSEEEEE--ECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEE
T ss_pred CCCEEEEEcCCC-CEEEEEccCCccCCCcEEE--ECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEE
Confidence 899999999854 333344332 23455554 577888888888776 9999996 4566666655433 4789999
Q ss_pred eCCCcEEEEEeCCCcEEEEeCCC
Q 047355 240 HPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 240 ~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
+|+++++++ +.|++|++|++..
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCCCcEEEE-CCCCeEEEEEccc
Confidence 999987777 6799999999754
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=2.7e-17 Score=139.70 Aligned_cols=268 Identities=11% Similarity=0.083 Sum_probs=183.5
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
+..|.+++|+|++..++....++.++.|. .+....+..+......++|.++++.++++..++.|.+||.++++....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 45688899999988888778889999993 233444444555668889999999777888999999999987765444
Q ss_pred ecccccceeEEEEecCCCEEEEEeCC----CcEEEEeCCCCceeeeEec--CCccceEEEEeCCCCCCEEEEEeC-----
Q 047355 97 FEAHEDYIRSLAVHPTFPFVLTASDD----KLIKLWDWEKNWECTQTFE--GHSHYVMQSAFNPKDLNTFASASL----- 165 (312)
Q Consensus 97 ~~~h~~~i~~~~~~~~~~~l~t~s~d----~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~s~----- 165 (312)
...+...+.+++++|+++++++...+ +.|.+||....... ..+. .+...+..+.++|. +.++++...
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-DIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTN 159 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-EEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTB
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-EEEccCccCCcccceEECCC-CCEEEEeccccccC
Confidence 43566789999999999988777666 68999997654221 1121 23456788889985 456665543
Q ss_pred -CCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceE-EEEEeCCCeEEEEeCCC-CeEEE--------EecccccCe
Q 047355 166 -DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVY-LITGSDDFTVKVWDYET-KTCVQ--------ILEGHTNNV 234 (312)
Q Consensus 166 -dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~sg~~dg~i~vwd~~~-~~~~~--------~~~~h~~~i 234 (312)
.+.|..+|..+.+... +..+...+..+. +++++.+ +++.+.++.|.+||..+ +.... .+.++ ..+
T Consensus 160 ~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~--~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~ 235 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTP-IIQNISVANGIA--LSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP 235 (333)
T ss_dssp CCEEEEEECTTSCCEEE-EEEEESSEEEEE--ECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred CCceEEEEeCCCCEEEE-eecCCCcccceE--ECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence 2456666655443322 222223344444 5778764 45556688999999853 22111 11222 367
Q ss_pred EEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCcc------ceEEEEEecCCCeEEEEecC
Q 047355 235 TAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLE------RVWSIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 235 ~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~~ 294 (312)
..++++++++++++...++.|.+||. +++....+..+.. .+.+++|+||++.|.+++.+
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 88999999998888888899999998 4555555543332 68899999998888766666
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.81 E-value=3.8e-17 Score=139.46 Aligned_cols=257 Identities=15% Similarity=0.132 Sum_probs=174.5
Q ss_pred CcEEEEEEcCCCCeEEEEe---------cCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC---C--eE
Q 047355 18 DRVKSVDFHPTQPWVLASL---------YSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD---K--FI 83 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~---------~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---g--~i 83 (312)
..+...++ ||++++... .++.|.+||+.+++.. .+ ..+....|+|++++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 46778888 898887653 3677999999876543 23 457788999999999877643 3 47
Q ss_pred EEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCC---------------------------CcEEEEeCCCCcee
Q 047355 84 RVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDD---------------------------KLIKLWDWEKNWEC 136 (312)
Q Consensus 84 ~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d---------------------------~~v~iwd~~~~~~~ 136 (312)
.+|++.+++.......+ . +..++|+|+++.|+.++.+ ..+.+||+.....
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~- 164 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV- 164 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE-
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-
Confidence 78888877654444333 3 8999999999988877632 5688899876532
Q ss_pred eeEecCCccceEEEEeCCCCCCEEEEEeCCC-------eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeC
Q 047355 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDG-------TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSD 209 (312)
Q Consensus 137 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg-------~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~ 209 (312)
...+.. . .+..+.|+|.+ +++++..+. ...+|.+++++ ...+..+ ..+.. ++|+|.+|+.++.
T Consensus 165 ~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~----~spdg~~l~~~~~ 234 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYA----VDSDGERILLYGK 234 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEE----EEECSSCEEEEEC
T ss_pred EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceee----ECCCCCEEEEEEc
Confidence 122322 2 56778899854 666665542 34555444333 3334333 33322 2678887877664
Q ss_pred C--------CeEEEEeCCCCeEEEEecccccCeEE-EEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEE
Q 047355 210 D--------FTVKVWDYETKTCVQILEGHTNNVTA-VCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIG 280 (312)
Q Consensus 210 d--------g~i~vwd~~~~~~~~~~~~h~~~i~~-l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 280 (312)
+ ..|.+|| +++.......|...+.. +.|+ ++ ++++++.++.++|| +.+++... +..+...+.+++
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~ 308 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFD 308 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEE
T ss_pred cccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeee
Confidence 3 4788888 56666666667778886 9999 88 99999999999999 87655533 333466789999
Q ss_pred EecCCCeEEEEecCCeE-EEEec
Q 047355 281 YKKGSNQVAFGCDNGTL-IVKIG 302 (312)
Q Consensus 281 ~~~~~~~l~~~~~~g~i-~v~~~ 302 (312)
|+| ..+++++.+++. .|+..
T Consensus 309 ~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 309 VDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp ESS--SEEEEEECSSSCCEEEEE
T ss_pred eeC--cEEEEEcCCCChHHheEe
Confidence 999 666666666654 55554
No 173
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.80 E-value=4.2e-15 Score=123.72 Aligned_cols=277 Identities=6% Similarity=-0.032 Sum_probs=189.2
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe--cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA 92 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 92 (312)
.+...+.+++++++|...++...++.|.+||.. ++. ..+.. ....+..+++.+++...++...++.|..|+.+...
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence 345689999999999877766668999999987 433 33322 23567788888888887777778899999976321
Q ss_pred eeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEE
Q 047355 93 SVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172 (312)
Q Consensus 93 ~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iw 172 (312)
...........+..+++.+++.+.++...++.+..||.. ..............+..+.+.+. +.+.++...++.|..|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIREYELPNKGSYPSFITLGSD-NALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEE
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEEEecCCCCCCCCceEEEcCC-CCEEEEeCCCCEEEEE
Confidence 111122244568899999999888877778899999973 22221222233455677888874 4666666667899999
Q ss_pred EcCCCcceee-ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEE-ecccccCeEEEEEeCCCcEEEEEe
Q 047355 173 NMDSSAAKFT-LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI-LEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 173 d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
|. +++.... +......+..+. .++++.+.++...++.|..||. +++.... +..+...+.+++++++++++++..
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~--~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGIT--KGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEE--ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred cC-CCcEEEeeCCCCCCcceeEE--ECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 98 4443322 222233445544 5677887777767889999999 6654332 333456799999999998777776
Q ss_pred CCCcEEEEeCCCcceee-ecccCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 251 EDGTILIWNATTFRLQN-TLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 251 ~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
.++.|..||. +++... .+..+...+.++++ ++++..++...++..++..
T Consensus 244 ~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~ 293 (299)
T 2z2n_A 244 GANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTL 293 (299)
T ss_dssp TTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEE
T ss_pred CCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEc
Confidence 7889999998 444322 23344567899999 8888877766666666543
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=2.2e-17 Score=153.21 Aligned_cols=238 Identities=10% Similarity=0.084 Sum_probs=160.4
Q ss_pred EEEEc--CCCCe-EEEEec-CCeEEEEecc--C-CceeeeEEe-----cCCceeEEEEeeCCcEEEEecCC---------
Q 047355 22 SVDFH--PTQPW-VLASLY-SGTVCIWNYH--S-QTTEKSVKV-----TDSPVRTAKFVAREHWIVCGSDD--------- 80 (312)
Q Consensus 22 ~~~~~--~~~~~-l~~~~~-dg~v~iw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~g~~d--------- 80 (312)
+.+|+ |||++ |+.+.. +..|.+|++. . ++ ...+.. +...+..++|+|+++.|+.++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 55555 99998 775543 5666677765 2 33 333333 34567889999999999988876
Q ss_pred -CeEEEEEccC------ceeeeeec-ccccceeEEEEecCCCEEEEEeCC--------CcEEEEeCCC-C--ceeeeEec
Q 047355 81 -KFIRVFDYNT------MASVKEFE-AHEDYIRSLAVHPTFPFVLTASDD--------KLIKLWDWEK-N--WECTQTFE 141 (312)
Q Consensus 81 -g~i~iwd~~~------~~~~~~~~-~h~~~i~~~~~~~~~~~l~t~s~d--------~~v~iwd~~~-~--~~~~~~~~ 141 (312)
..|++||+.+ +.. ..+. .+...+..++|+|+++.|+.++.+ ..|.+||+.. . ........
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5899999987 443 4454 556778889999999999887755 3799999873 3 13333344
Q ss_pred CCccceEEEEeCCCCCCEEEEEeCCC--eEEEEEcCCCcceeeecccccc--------eeEEEEEEcCCceEEEEEeCCC
Q 047355 142 GHSHYVMQSAFNPKDLNTFASASLDG--TIQIWNMDSSAAKFTLDAHEKG--------INCIDYFITSDKVYLITGSDDF 211 (312)
Q Consensus 142 ~~~~~v~~~~~~~~~~~~~~s~s~dg--~v~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~l~sg~~dg 211 (312)
.+...+....|+|.+ .+++++..++ .|.+||+.+++.......+... +..+ .+++++.++++++. +
T Consensus 239 ~~~~~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~--~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 239 GPEEAIAQAEWAPDG-SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF--APLANGLIAVVHGK-G 314 (662)
T ss_dssp ETTBCEEEEEECTTS-CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE--EECTTSCEEEEEBS-S
T ss_pred CCCceEcceEECCCC-eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceE--eEeCCCEEEEEEEc-C
Confidence 456778889999965 4788888888 5666666555543333222211 2233 34678889999988 9
Q ss_pred eEEEE--eCCCCeEEEEecccccCeEEE-EEeCCCcEEEEEeCCC--cEEEEeCCCccee
Q 047355 212 TVKVW--DYETKTCVQILEGHTNNVTAV-CFHPELRIIITASEDG--TILIWNATTFRLQ 266 (312)
Q Consensus 212 ~i~vw--d~~~~~~~~~~~~h~~~i~~l-~~~~~~~~l~s~s~dg--~v~iwd~~~~~~~ 266 (312)
.+++| |..+++ +..+..|...+..+ +++++.-++++++.+. .|.+||+.+++..
T Consensus 315 ~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 315 AAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp SCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred ccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 99999 665565 56777787778877 6655544555566664 4555576666543
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=9.7e-16 Score=127.24 Aligned_cols=234 Identities=15% Similarity=0.183 Sum_probs=167.1
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec------ccccceeEEEEe-cCCCEEEEEeC-CCcEEEEeCCC
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE------AHEDYIRSLAVH-PTFPFVLTASD-DKLIKLWDWEK 132 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~h~~~i~~~~~~-~~~~~l~t~s~-d~~v~iwd~~~ 132 (312)
....+++.+++.++++...++.|.+||.+ ++....+. .|...+..+++. +++.++++... ++.|.+||..
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~- 108 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY- 108 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-
Confidence 46678888999888888889999999987 44444443 244568899994 66666665533 7899999943
Q ss_pred CceeeeEec-CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeec--ccccceeEEEEEEcCCceEEEEEeC
Q 047355 133 NWECTQTFE-GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLD--AHEKGINCIDYFITSDKVYLITGSD 209 (312)
Q Consensus 133 ~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~ 209 (312)
. .....+. .+......+.++|. +.++++...++.|.+||... +....+. .+...+..+. +++++.++++...
T Consensus 109 g-~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~--~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 109 G-QFVRKFGATILQHPRGVTVDNK-GRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVV--VNDKQEIFISDNR 183 (286)
T ss_dssp S-CEEEEECTTTCSCEEEEEECTT-SCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEE--ECSSSEEEEEEGG
T ss_pred C-cEEEEecCccCCCceEEEEeCC-CCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEE--ECCCCCEEEEECC
Confidence 3 2333342 23456778889885 46777777889999999653 3333332 2333455554 5778888888888
Q ss_pred CCeEEEEeCCCCeEEEEeccc--ccCeEEEEEeCCCcEEEEEeCCC-cEEEEeCCCcceeeecccCc--cceEEEEEecC
Q 047355 210 DFTVKVWDYETKTCVQILEGH--TNNVTAVCFHPELRIIITASEDG-TILIWNATTFRLQNTLSSGL--ERVWSIGYKKG 284 (312)
Q Consensus 210 dg~i~vwd~~~~~~~~~~~~h--~~~i~~l~~~~~~~~l~s~s~dg-~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~~~ 284 (312)
++.|++||.. ++.+..+..+ ...+..++++++++++++...++ .|++||. +++.+..+..+. ..+.+++++|+
T Consensus 184 ~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 184 AHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp GTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred CCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCC
Confidence 9999999974 5555556433 35789999999999888888886 9999995 455555555443 34789999999
Q ss_pred CCeEEEEecCCeEEEEeccC
Q 047355 285 SNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 285 ~~~l~~~~~~g~i~v~~~~~ 304 (312)
|+++++ +.+++|+|+....
T Consensus 262 g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 262 GSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp TEEEEE-ETTTEEEEEECSC
T ss_pred CcEEEE-CCCCeEEEEEccc
Confidence 987777 5789999886543
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=1.7e-16 Score=148.41 Aligned_cols=242 Identities=8% Similarity=0.024 Sum_probs=168.1
Q ss_pred CcEEEEEEcCCCCeEEEEecCC-----eEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCe----------
Q 047355 18 DRVKSVDFHPTQPWVLASLYSG-----TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF---------- 82 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~---------- 82 (312)
..+..++|+|||++|+.+..++ .|++||+.+++..... .....+..+.|++|++.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccCcccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 3688999999999999776543 8999999988765432 22223567899999999998887765
Q ss_pred ------EEEEEccCcee--eeee--cccccceeEEEEecCCCEEEEEeC-----CCcEEEEeCCC------CceeeeEec
Q 047355 83 ------IRVFDYNTMAS--VKEF--EAHEDYIRSLAVHPTFPFVLTASD-----DKLIKLWDWEK------NWECTQTFE 141 (312)
Q Consensus 83 ------i~iwd~~~~~~--~~~~--~~h~~~i~~~~~~~~~~~l~t~s~-----d~~v~iwd~~~------~~~~~~~~~ 141 (312)
|++|++.+... ...+ ..|...+..+.++|++++|+..+. +..+.+||+.. .......+.
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 99999987652 1222 335566789999999999887654 56899999864 322234455
Q ss_pred CCccceEEEEeCCCCCCEEEEEeC-C---CeEEEEEcCCCcc--eeeeccccc--ceeEEEEEEcCCceEEEEEeCCCe-
Q 047355 142 GHSHYVMQSAFNPKDLNTFASASL-D---GTIQIWNMDSSAA--KFTLDAHEK--GINCIDYFITSDKVYLITGSDDFT- 212 (312)
Q Consensus 142 ~~~~~v~~~~~~~~~~~~~~s~s~-d---g~v~iwd~~~~~~--~~~~~~~~~--~v~~~~~~~~~~~~~l~sg~~dg~- 212 (312)
.+...+.. .|+|.+ ..++..+. + +.|.+||+.+... ...+..|.. .+..+.+ .+++.++++...++.
T Consensus 284 ~~~~~~~~-~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 284 DNFEGEYD-YVTNEG-TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVAC--VRSNFLVLCYLHDVKN 359 (710)
T ss_dssp CSSSSCEE-EEEEET-TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEE--ETTTEEEEEEEETTEE
T ss_pred CCCCcEEE-EEeccC-CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEE--EcCCEEEEEEEECCEE
Confidence 55544443 356644 44444443 3 3699999987642 234444433 4555554 457788888888885
Q ss_pred -EEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEE-EEeC---CCcEEEEeCCCcc
Q 047355 213 -VKVWDYETKTCVQILEGHTNNVTAVCFHPELRIII-TASE---DGTILIWNATTFR 264 (312)
Q Consensus 213 -i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~-s~s~---dg~v~iwd~~~~~ 264 (312)
|.+|+..+++.+..+..+...+..++++|+++.++ +.++ .++|++||+.+++
T Consensus 360 ~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 56678767777777877878899999999887555 3333 4789999998766
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=4e-15 Score=134.67 Aligned_cols=280 Identities=12% Similarity=0.163 Sum_probs=192.8
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEecc--CCceeeeEEecCCceeEEEEe----eCCcEEEEecC-CCeEEEEEccC
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYH--SQTTEKSVKVTDSPVRTAKFV----AREHWIVCGSD-DKFIRVFDYNT 90 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~g~~-dg~i~iwd~~~ 90 (312)
..+..+.|+|||+++++++.|+.|.+||+. +.+....+..... -..+.|+ |++++++++.+ ++++.++|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 457799999999999999999999999995 6666666655443 4678899 69999988775 59999999999
Q ss_pred ceeeeeeccc----------cc-ceeEEEEecCCCE-EEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCC
Q 047355 91 MASVKEFEAH----------ED-YIRSLAVHPTFPF-VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLN 158 (312)
Q Consensus 91 ~~~~~~~~~h----------~~-~i~~~~~~~~~~~-l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 158 (312)
.+.++.+... .. .+..+..++++.. ++....+|.|.++|......................|+|.+..
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY 355 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCE
Confidence 8887766422 12 5677888887654 4556678999999976542221111122334456778986544
Q ss_pred EEEEEeCCCeEEEEEcCCCcceeeecc-cccce--eEEEEEEcCC-ceEEEEEe-CCCeEEEEeCCC-------CeEEEE
Q 047355 159 TFASASLDGTIQIWNMDSSAAKFTLDA-HEKGI--NCIDYFITSD-KVYLITGS-DDFTVKVWDYET-------KTCVQI 226 (312)
Q Consensus 159 ~~~s~s~dg~v~iwd~~~~~~~~~~~~-~~~~v--~~~~~~~~~~-~~~l~sg~-~dg~i~vwd~~~-------~~~~~~ 226 (312)
+++++..+++|.++|+.+.+....+.. ...+- ....+ ..++ +...+++. .++.|.++|..+ .+.++.
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~ 434 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDS 434 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEE
Confidence 455556788999999998876655543 11110 11223 3555 44555554 568999999987 667777
Q ss_pred ecccccCeEEEEEeCCCcEEEEEeC-------CCcEEEEeCCCc-----cee-eec--------ccCccceEEEEEecCC
Q 047355 227 LEGHTNNVTAVCFHPELRIIITASE-------DGTILIWNATTF-----RLQ-NTL--------SSGLERVWSIGYKKGS 285 (312)
Q Consensus 227 ~~~h~~~i~~l~~~~~~~~l~s~s~-------dg~v~iwd~~~~-----~~~-~~~--------~~~~~~v~~~~~~~~~ 285 (312)
+......-..+..+|+++++..... .+.|.++|+.+. ... ..+ .....+++.+.|+|+|
T Consensus 435 i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 514 (567)
T 1qks_A 435 FPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDG 514 (567)
T ss_dssp EECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTS
T ss_pred EecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCC
Confidence 7755433345778999998887663 459999999877 211 111 1234689999999999
Q ss_pred CeEEEEec-----CCeEEE
Q 047355 286 NQVAFGCD-----NGTLIV 299 (312)
Q Consensus 286 ~~l~~~~~-----~g~i~v 299 (312)
+.+-++.. ++.|.|
T Consensus 515 ~~~~~s~~~~~~~~~~i~v 533 (567)
T 1qks_A 515 TEVWFSVWNGKDQESALVV 533 (567)
T ss_dssp SEEEEEEECCTTSCCEEEE
T ss_pred CEEEEEeecCCCCCCcEEE
Confidence 99887643 566666
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=1.3e-16 Score=138.06 Aligned_cols=254 Identities=10% Similarity=0.046 Sum_probs=163.1
Q ss_pred EeccCCceeeeEEecCCceeE-----EEEeeCCcEEEEecC-CC--eEEEEEccCceeeeeecccccceeEEEEecCCCE
Q 047355 44 WNYHSQTTEKSVKVTDSPVRT-----AKFVAREHWIVCGSD-DK--FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPF 115 (312)
Q Consensus 44 w~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~g~~-dg--~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~ 115 (312)
++..++.....+..+...... .+|+|++++|+.++. ++ .|.+||+.+++..+....+...+....|+|+++.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 345555555555544433333 679999999988876 66 4888899888777666677666667889999999
Q ss_pred EEEEeCCCcEEEEeCCCCceeeeEecCCccceEEE--EeCCCCCCEEEEE----------------------eCCCeEEE
Q 047355 116 VLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQS--AFNPKDLNTFASA----------------------SLDGTIQI 171 (312)
Q Consensus 116 l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~s~----------------------s~dg~v~i 171 (312)
|++++.++.+++||+.+... ...+..+...+... .++| ++..++.. ..+..|.+
T Consensus 95 l~~~~~~~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEE-NVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp EEEEETTTEEEEEETTTCCE-EEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcc-eeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99999999999999886533 33344444444323 3366 44555532 23468999
Q ss_pred EEcCCCcceeeecccccceeEEEEEEcC-CceEEEEEeCC------CeEEEEeCCCCeEEEEecccc--cCeEEEEEeCC
Q 047355 172 WNMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGSDD------FTVKVWDYETKTCVQILEGHT--NNVTAVCFHPE 242 (312)
Q Consensus 172 wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~h~--~~i~~l~~~~~ 242 (312)
||+.+++.. .+..+...+..+. ++| ++..|+....+ ..|.++|...++... +..+. ..+...+|+||
T Consensus 173 ~d~~~g~~~-~l~~~~~~~~~~~--~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 173 VDLKTGEST-VILQENQWLGHPI--YRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp EETTTCCEE-EEEEESSCEEEEE--EETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTEEEEEEEECTT
T ss_pred EECCCCceE-EeecCCccccccE--ECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCcccccceECCC
Confidence 999887644 3334445555555 578 88888776653 378888887655444 33343 35888999999
Q ss_pred CcEEEEEeCC-C----cEEEEeCCCcceee--ecccCccc---eEEEEEecCCCeEEEEe---------cCCeEEEEecc
Q 047355 243 LRIIITASED-G----TILIWNATTFRLQN--TLSSGLER---VWSIGYKKGSNQVAFGC---------DNGTLIVKIGN 303 (312)
Q Consensus 243 ~~~l~s~s~d-g----~v~iwd~~~~~~~~--~~~~~~~~---v~~~~~~~~~~~l~~~~---------~~g~i~v~~~~ 303 (312)
++.|+..+.+ + .|++||+.+++... .+...... ...+.|+|||+.|++.. .+..|+++-..
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 9977655432 2 39999998876432 22221000 11236999999998653 34566665543
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=3.7e-17 Score=153.58 Aligned_cols=233 Identities=13% Similarity=0.078 Sum_probs=162.7
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccc-----eeEEEEecCCCEEEEEeCC---------CcEE
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDY-----IRSLAVHPTFPFVLTASDD---------KLIK 126 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~-----i~~~~~~~~~~~l~t~s~d---------~~v~ 126 (312)
....+.|++++++++++ |+.|++||+.+++....+..|... ..+++++|++++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35578999999988886 899999999998877777777543 2447899999999988876 5567
Q ss_pred EEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceee-ecccccce---------------
Q 047355 127 LWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT-LDAHEKGI--------------- 190 (312)
Q Consensus 127 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~-~~~~~~~v--------------- 190 (312)
+||+.+.. ...+..+...+....|+|. +..++.+ .|+.|++||+.++..... ..++...+
T Consensus 96 ~~d~~~~~--~~~l~~~~~~~~~~~~SPd-G~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 96 IYDLNKRQ--LITEERIPNNTQWVTWSPV-GHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEETTTTE--ECCSSCCCTTEEEEEECSS-TTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEECCCCc--EEEcccCCCcceeeEECCC-CCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 99988753 2335566778899999995 4667666 478999999987664432 22322211
Q ss_pred --eEEEEEEcCCceEEEEEeCCC------------------------------------eEEEEeCCC---C---eEEEE
Q 047355 191 --NCIDYFITSDKVYLITGSDDF------------------------------------TVKVWDYET---K---TCVQI 226 (312)
Q Consensus 191 --~~~~~~~~~~~~~l~sg~~dg------------------------------------~i~vwd~~~---~---~~~~~ 226 (312)
..+ .++|||++|+..+.|. .|++||+.+ + +....
T Consensus 172 ~~~~~--~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 172 AYSAL--WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSBCE--EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred CCcce--EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 123 3589999888875321 588899988 6 44333
Q ss_pred ec-----ccccCeEEEEEeCCCcEEEEEeC----CCcEEEEeCCCcc----e--eeec--ccCccc-----eEEEEEecC
Q 047355 227 LE-----GHTNNVTAVCFHPELRIIITASE----DGTILIWNATTFR----L--QNTL--SSGLER-----VWSIGYKKG 284 (312)
Q Consensus 227 ~~-----~h~~~i~~l~~~~~~~~l~s~s~----dg~v~iwd~~~~~----~--~~~~--~~~~~~-----v~~~~~~~~ 284 (312)
.. +|...+..++|+||++.++.... +..|++||+.+++ . ..++ ..+... ...+.|+||
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 22 37778999999999997665543 3479999998876 1 1222 223322 236889999
Q ss_pred CCeEE-EEec-CCeEEEEe
Q 047355 285 SNQVA-FGCD-NGTLIVKI 301 (312)
Q Consensus 285 ~~~l~-~~~~-~g~i~v~~ 301 (312)
|+.|+ +.++ +|.-.|+.
T Consensus 330 G~~l~~~~s~~~G~~~l~~ 348 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICY 348 (740)
T ss_dssp SSEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEEcCCCceEEEE
Confidence 99988 6664 56544444
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=7.8e-17 Score=150.38 Aligned_cols=242 Identities=8% Similarity=-0.101 Sum_probs=161.6
Q ss_pred cCcEEEEEEcCCCCeEEEE-----ecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCe---------
Q 047355 17 SDRVKSVDFHPTQPWVLAS-----LYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF--------- 82 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~-----~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~--------- 82 (312)
...+.+++|+|||++||.+ +.+..|++||+.+++..............+.|+++++.|+.++.|..
T Consensus 120 ~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 120 TVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred CEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 3468999999999999843 34568999999887654111112222257899999999999888766
Q ss_pred ----EEEEEccCce----eeeeecccccceeEEEEecCCCEEEEEeCCC----cEEEEeCCCCceeeeEecCCccceEEE
Q 047355 83 ----IRVFDYNTMA----SVKEFEAHEDYIRSLAVHPTFPFVLTASDDK----LIKLWDWEKNWECTQTFEGHSHYVMQS 150 (312)
Q Consensus 83 ----i~iwd~~~~~----~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~----~v~iwd~~~~~~~~~~~~~~~~~v~~~ 150 (312)
|++|++.+.. .+.....|...+..+.++|++++|+.++.++ .+.+||.... ....+..+.......
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--DFRLLVKGVGAKYEV 277 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--SCEEEEECSSCCEEE
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--ceEEeecCCCceEEE
Confidence 9999998765 2333344556788999999999988777655 5666654332 233344444444555
Q ss_pred EeCCCCCCEEEEEe---CCCeEEEEEcCCCcc--eeeeccc--ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCC-CCe
Q 047355 151 AFNPKDLNTFASAS---LDGTIQIWNMDSSAA--KFTLDAH--EKGINCIDYFITSDKVYLITGSDDFTVKVWDYE-TKT 222 (312)
Q Consensus 151 ~~~~~~~~~~~s~s---~dg~v~iwd~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~ 222 (312)
.+ +.+. +++... .++.|.+||+.+... ...+..+ ...+..+.+ . ++.++++...|+..++|.+. +++
T Consensus 278 ~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~--~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 278 HA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI--V-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE--E-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred Ee-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE--E-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 55 4344 555544 257899999977653 1233333 334555554 3 67788999999988887553 355
Q ss_pred EEEEeccc-ccCeEEEEEeCCCcEEEEEe----CCCcEEEEeCCCcce
Q 047355 223 CVQILEGH-TNNVTAVCFHPELRIIITAS----EDGTILIWNATTFRL 265 (312)
Q Consensus 223 ~~~~~~~h-~~~i~~l~~~~~~~~l~s~s----~dg~v~iwd~~~~~~ 265 (312)
....+..+ ...+..++++|+++.++... ..++|++||+.+++.
T Consensus 353 ~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 353 PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 55666555 56788889999987666322 347899999987653
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=1.8e-15 Score=129.01 Aligned_cols=223 Identities=10% Similarity=0.119 Sum_probs=150.3
Q ss_pred CcEEEEEEcCCCCeEEEEecC---Ce--EEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecC-------------
Q 047355 18 DRVKSVDFHPTQPWVLASLYS---GT--VCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD------------- 79 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~d---g~--v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~------------- 79 (312)
..+..++|+|||++|+....+ +. |.+|++.+++........ . +..+.|+|+++.|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457889999999999987654 34 777788776655444433 3 888999999998887763
Q ss_pred --------------CCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCC-------cEEEEeCCCCceeee
Q 047355 80 --------------DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK-------LIKLWDWEKNWECTQ 138 (312)
Q Consensus 80 --------------dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~-------~v~iwd~~~~~~~~~ 138 (312)
...|.+||+.+++..+.+.. . .+..++|+|++ ++++++.+. ...+|.+... .. .
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~~-~ 211 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-KE-E 211 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-EE-E
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-ce-E
Confidence 25789999988766345544 3 78899999999 777776542 4455544422 22 2
Q ss_pred EecCCccceEEEEeCCCCCCEEEEEeCC--------CeEEEEEcCCCcceeeecccccceeE-EEEEEcCCceEEEEEeC
Q 047355 139 TFEGHSHYVMQSAFNPKDLNTFASASLD--------GTIQIWNMDSSAAKFTLDAHEKGINC-IDYFITSDKVYLITGSD 209 (312)
Q Consensus 139 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d--------g~v~iwd~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~l~sg~~ 209 (312)
.+..+ ..+... +| ++..++..+.+ ..|.+|| +++.......+...+.. +. ++ ++ ++++++.
T Consensus 212 ~l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~--~s-dg-~~~~~~~ 281 (347)
T 2gop_A 212 KMFEK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKI--KD-GK-VYFTLFE 281 (347)
T ss_dssp EEEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEE--ET-TE-EEEEEEE
T ss_pred EeccC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccE--Ec-Cc-EEEEEec
Confidence 22223 333333 66 44566665543 3678888 44444344455555654 44 35 77 8889999
Q ss_pred CCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcE-EEEeCC
Q 047355 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTI-LIWNAT 261 (312)
Q Consensus 210 dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v-~iwd~~ 261 (312)
++.+++| +.+++....+. +...|.+++|+| .++++++.++.. .+|.+.
T Consensus 282 ~~~~~l~-~~~g~~~~~~~-~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 282 EGSVNLY-IWDGEIKPIAK-GRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TTEEEEE-EESSSEEEEEC-SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred CCcEEEE-EcCCceEEEec-CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999999 87666544444 577899999999 677888877765 777765
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=2.6e-15 Score=125.37 Aligned_cols=236 Identities=5% Similarity=-0.075 Sum_probs=165.5
Q ss_pred eEEecCCceeEEEEeeCCc-EEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 047355 54 SVKVTDSPVRTAKFVAREH-WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 132 (312)
Q Consensus 54 ~~~~~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~ 132 (312)
.+.........+.|.++++ .++++..++.|..|+.++. ...+..+...+.+++++|+++++++...++.|.+||..+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 3333344567889999998 7778888999999999876 566666777899999999999888777778999999854
Q ss_pred CceeeeEec---CC-ccceEEEEeCCCCCCEEEEE----e-------------CCCeEEEEEcCCCcceeeeccccccee
Q 047355 133 NWECTQTFE---GH-SHYVMQSAFNPKDLNTFASA----S-------------LDGTIQIWNMDSSAAKFTLDAHEKGIN 191 (312)
Q Consensus 133 ~~~~~~~~~---~~-~~~v~~~~~~~~~~~~~~s~----s-------------~dg~v~iwd~~~~~~~~~~~~~~~~v~ 191 (312)
.... .... .. ...+..+.++|. +.++++. + ..+.|..++.. + ....+..+....+
T Consensus 100 g~~~-~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 100 GEWE-SIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSAPIRDRVKPN 175 (296)
T ss_dssp CCEE-EEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEEEECCCSSEE
T ss_pred CcEE-EEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEEeecCCCCCc
Confidence 4221 1111 11 123456778874 4677763 2 13455555554 2 2333334444455
Q ss_pred EEEEEEcCCceEEEEEeCCCeEEEEeCC-CCeE---EEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceee
Q 047355 192 CIDYFITSDKVYLITGSDDFTVKVWDYE-TKTC---VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267 (312)
Q Consensus 192 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~---~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~ 267 (312)
.+. +++++..+++.+.++.|.+|++. +++. ...+..+...+.+++++++++++++. ++.|.+|+.. ++...
T Consensus 176 gi~--~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 176 GLA--FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEE--ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred cEE--ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEE
Confidence 555 47888888888888999999986 4544 33333455567889999999876666 7899999976 66666
Q ss_pred ecccCccceEEEEE-ecCCCeEEEEecCCeEEEEe
Q 047355 268 TLSSGLERVWSIGY-KKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 268 ~~~~~~~~v~~~~~-~~~~~~l~~~~~~g~i~v~~ 301 (312)
.+..+.. +.+++| +|+++.|.+++.++..++..
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET 284 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence 6666655 889999 58999999999888777654
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=4.2e-15 Score=124.09 Aligned_cols=240 Identities=9% Similarity=0.073 Sum_probs=167.3
Q ss_pred cccCcEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCcee
Q 047355 15 QKSDRVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS 93 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 93 (312)
.......+++|+|+++ .++++..++.|..|+..+. ...+..+...+..+++.++++++++...++.|.+||..+++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 3445678999999998 6778888999999998876 555666666788999999999887777778999999877654
Q ss_pred eeeeccc----ccceeEEEEecCCCEEEEE----e-------------CCCcEEEEeCCCCceeeeEecCCccceEEEEe
Q 047355 94 VKEFEAH----EDYIRSLAVHPTFPFVLTA----S-------------DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAF 152 (312)
Q Consensus 94 ~~~~~~h----~~~i~~~~~~~~~~~l~t~----s-------------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~ 152 (312)
....... ...+..++++|+++++++. + ..+.|..++.. . . ...+..+......+.|
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~-~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-T-LSAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-C-EEEEECCCSSEEEEEE
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-C-EEEeecCCCCCccEEE
Confidence 3332221 2346789999999988873 3 12345555543 1 2 2334445556678899
Q ss_pred CCCCCCEEEEEeCCCeEEEEEcC-CCcc---eeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec
Q 047355 153 NPKDLNTFASASLDGTIQIWNMD-SSAA---KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE 228 (312)
Q Consensus 153 ~~~~~~~~~s~s~dg~v~iwd~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 228 (312)
+|.+ ..+++.+.++.|++||+. .+.. ...+..+...+..+. .+++|.++++. ++.|.+||.. ++.+..+.
T Consensus 180 s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~--~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 180 LPSG-NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLR--VDAGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp CTTS-CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEE--EBTTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred CCCC-CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEE--ECCCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 9854 556778888999999997 3332 122222223334444 46788766655 7899999986 77777777
Q ss_pred ccccCeEEEEE-eCCCcEEEEEeCCCcEEEEeCCCcceee
Q 047355 229 GHTNNVTAVCF-HPELRIIITASEDGTILIWNATTFRLQN 267 (312)
Q Consensus 229 ~h~~~i~~l~~-~~~~~~l~s~s~dg~v~iwd~~~~~~~~ 267 (312)
.+.. +++++| .|+++.|+.++.+ .+.-++..+.++.+
T Consensus 254 ~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp CSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred CCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccc
Confidence 7777 999999 5898888888876 44556776665544
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=6.2e-15 Score=137.88 Aligned_cols=271 Identities=7% Similarity=0.016 Sum_probs=177.5
Q ss_pred CCCCeEEEEecCC-----eEEEEeccCCceeeeEEe------cCCceeEEEEeeCCcEEEEecCCC-----eEEEEEccC
Q 047355 27 PTQPWVLASLYSG-----TVCIWNYHSQTTEKSVKV------TDSPVRTAKFVAREHWIVCGSDDK-----FIRVFDYNT 90 (312)
Q Consensus 27 ~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~ 90 (312)
|+|++++....++ .+.+.+...++....+.. +...+....|+||+++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8899887655332 334444433333222211 112477889999999998665433 899999999
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCCCc----------------EEEEeCCCCcee-eeEec--CCccceEEEE
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL----------------IKLWDWEKNWEC-TQTFE--GHSHYVMQSA 151 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~----------------v~iwd~~~~~~~-~~~~~--~~~~~v~~~~ 151 (312)
++.......+ ..+..++|+|+++.|+.++.++. |++|++.+.... ...+. .+...+....
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 8766533222 23678999999999998888766 999998765321 12223 2455677889
Q ss_pred eCCCCCCEEEEEeC-----CCeEEEEEcCC------Cc-ceeeecccccceeEEEEEEcCCceEEEEEeC----CCeEEE
Q 047355 152 FNPKDLNTFASASL-----DGTIQIWNMDS------SA-AKFTLDAHEKGINCIDYFITSDKVYLITGSD----DFTVKV 215 (312)
Q Consensus 152 ~~~~~~~~~~s~s~-----dg~v~iwd~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~----dg~i~v 215 (312)
|+|.+ ..++..+. +..|++||+.+ +. ....+..+...+... +++++..|+..+. ++.|.+
T Consensus 240 ~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~---~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 240 LSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDY---VTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp ECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEE---EEEETTEEEEEECTTCTTCEEEE
T ss_pred EcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEE---EeccCCEEEEEECCCCCCCEEEE
Confidence 99854 56655543 56899999976 32 344555555544432 2345554444333 347999
Q ss_pred EeCCCCeE--EEEeccccc--CeEEEEEeCCCcEEEEEeCCCc--EEEEeCCCcceeeecccCccceEEEEEecCCCeEE
Q 047355 216 WDYETKTC--VQILEGHTN--NVTAVCFHPELRIIITASEDGT--ILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVA 289 (312)
Q Consensus 216 wd~~~~~~--~~~~~~h~~--~i~~l~~~~~~~~l~s~s~dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 289 (312)
||+.++.. ...+..|.. .+..++|++++.++++...|+. |++|++.+++....+..+...+..++++|+++.|+
T Consensus 316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp EETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred EeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 99987631 233334443 6888999988889999999985 56668767776666776667788999999998877
Q ss_pred EEec----CCeEEEEec
Q 047355 290 FGCD----NGTLIVKIG 302 (312)
Q Consensus 290 ~~~~----~g~i~v~~~ 302 (312)
.... .++++++-.
T Consensus 396 ~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 396 YQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEECSSCCCEEEEEET
T ss_pred EEEeCCCCCCEEEEEEC
Confidence 4433 456766544
No 185
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.73 E-value=1.3e-13 Score=114.74 Aligned_cols=267 Identities=7% Similarity=-0.058 Sum_probs=181.7
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEec--CCceeEEEEeeCCcEEEEecCCCeEEEEEccCcee
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT--DSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS 93 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 93 (312)
....+.++++++++...++...++.|.+|+.. .+.. .+... ...+..+.+.+++...++...++.|..||.+ ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 34688999999999877777678999999987 4332 23222 2457788888888877777668899999987 433
Q ss_pred e-eeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEE
Q 047355 94 V-KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172 (312)
Q Consensus 94 ~-~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iw 172 (312)
. .........+.++++.+++.+.++...++.+..+|.. .......+.........+.+.+. +.++++...++.|..|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD-NALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC-CCEEEEecCCCeEEEE
Confidence 2 1222234568899999999888777778889999876 32221222323456677888874 4566666667899999
Q ss_pred EcCCCccee-eecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEE-ecccccCeEEEEEeCCCcEEEEEe
Q 047355 173 NMDSSAAKF-TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI-LEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 173 d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
|. +++... ....+...+..+. .++++.+.++....+.|..||. +++.... +..+...+.+++++++++++++..
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~--~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGIT--SGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEE--ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CC-CCcEEEeeCCCCCCCcceEE--ECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 98 333322 2222223345554 5677877777667788999998 4544332 334456789999999999777777
Q ss_pred CCCcEEEEeCCCccee-eecccCccceEEEEEecCCCeEEEEe
Q 047355 251 EDGTILIWNATTFRLQ-NTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 251 ~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
.++.|..|+.. ++.. ..+......+.++++.++|+..++..
T Consensus 249 ~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 249 GANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp TTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred CCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc
Confidence 77999999984 4432 22333456688999999998766555
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=3.3e-15 Score=122.80 Aligned_cols=240 Identities=8% Similarity=-0.051 Sum_probs=162.7
Q ss_pred cEEEEEEcCCCCeEE-EEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 19 RVKSVDFHPTQPWVL-ASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
...+++++|+++..+ +...++.|.+|+..+................+++.+++..+++.. ++.|..||.++.... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 788999999998666 446789999998765432221112223566788988888665555 889999998765432 22
Q ss_pred c-ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCC
Q 047355 98 E-AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176 (312)
Q Consensus 98 ~-~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~ 176 (312)
. .....+..+++.+++.++++...++.|.+|+....... ............+.++|. +.++++...++.|.+||...
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNS-GNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTT-CCEEEEEGGGTEEEEECTTT
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCC-CCEEEEECCCCEEEEEecCC
Confidence 2 23356889999999987777777889999975443221 111122234566778874 46777777788999999887
Q ss_pred CcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEE
Q 047355 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256 (312)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~ 256 (312)
.........+...+..+. .++++.++++...++.|.+|+............+...+.+++++++++++++...++.|+
T Consensus 181 ~~~~~~~~~~~~~p~~i~--~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIA--VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CCEEECCCSSCCSEEEEE--ECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CceEeecccCCCCceEEE--ECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 654433222223445554 577887777777788999999876544333333345789999999999889999999999
Q ss_pred EEeCCCcc
Q 047355 257 IWNATTFR 264 (312)
Q Consensus 257 iwd~~~~~ 264 (312)
+++....+
T Consensus 259 ~~~~~~~~ 266 (270)
T 1rwi_B 259 KLTSLEHH 266 (270)
T ss_dssp EECCCGGG
T ss_pred EEcCCCcc
Confidence 99987543
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=1.2e-14 Score=119.47 Aligned_cols=237 Identities=8% Similarity=-0.030 Sum_probs=162.5
Q ss_pred ceeEEEEeeCCcEEE-EecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeE
Q 047355 61 PVRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQT 139 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~ 139 (312)
....+++.+++..++ +...++.|..|+..+.........+...+.++++.+++.++++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~--~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ--TV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--EE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--ee
Confidence 445778888888666 546789999998766443222223335678899999988666655 88999999765422 22
Q ss_pred ec-CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeC
Q 047355 140 FE-GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDY 218 (312)
Q Consensus 140 ~~-~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 218 (312)
+. ........+.++|. +.++++...++.|.+|+..+.............+..+. .++++.++++...++.|.+||.
T Consensus 102 ~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~--~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQ-GAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVA--VDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp CCCCSCSSEEEEEECTT-CCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEE--ECTTCCEEEEEGGGTEEEEECT
T ss_pred eecCCcCCCcceEECCC-CCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEE--EeCCCCEEEEECCCCEEEEEec
Confidence 22 22245678888884 46777777788999998665443322222222344554 4677887777777889999998
Q ss_pred CCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 219 ETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 219 ~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
...........+...+.++++++++.++++...++.|.+|+............+...+.+++++++|+.+++...+++|+
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 87665544333446789999999998888888889999999876544333223446789999999999888888899988
Q ss_pred EEecc
Q 047355 299 VKIGN 303 (312)
Q Consensus 299 v~~~~ 303 (312)
+.-..
T Consensus 259 ~~~~~ 263 (270)
T 1rwi_B 259 KLTSL 263 (270)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 76544
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=2.9e-14 Score=120.91 Aligned_cols=257 Identities=11% Similarity=-0.018 Sum_probs=171.9
Q ss_pred cCCeEEEEeccCCceeeeEEe------cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEe
Q 047355 37 YSGTVCIWNYHSQTTEKSVKV------TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVH 110 (312)
Q Consensus 37 ~dg~v~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~ 110 (312)
.+++|.++|.++.+....+.. .......+.+. +++..++...++.|.+||..+++.+..+.. ......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 378999999988765543311 11223455553 455555666679999999999988777743 3567889998
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCc-----cceEEEEeCCCCCCEEEEEe-CCCeEEEEEcCCCcceeeec
Q 047355 111 PTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHS-----HYVMQSAFNPKDLNTFASAS-LDGTIQIWNMDSSAAKFTLD 184 (312)
Q Consensus 111 ~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~s~s-~dg~v~iwd~~~~~~~~~~~ 184 (312)
++++..++...++.|.+||..+. .....+.... .....+.+ .+..++++.. .+++|.++|+.+.+....+.
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~-~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTY-EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTT-EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEECCCC-eEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 88855455547899999998765 3333332221 12233444 2334444443 48899999999887766654
Q ss_pred ccccceeEEEEEEcCCceEEEEEeCC----------CeEEEEeCCCCeEEEEeccc-ccCeEEEEEeCCCcEEEEEeCCC
Q 047355 185 AHEKGINCIDYFITSDKVYLITGSDD----------FTVKVWDYETKTCVQILEGH-TNNVTAVCFHPELRIIITASEDG 253 (312)
Q Consensus 185 ~~~~~v~~~~~~~~~~~~~l~sg~~d----------g~i~vwd~~~~~~~~~~~~h-~~~i~~l~~~~~~~~l~s~s~dg 253 (312)
.... ...+. .+++++++++...+ +.|.++|.++++....+... ....+.++|+|+++.|..+..
T Consensus 170 ~g~~-p~~i~--~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 170 IGIQ-PTSLV--MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp CSSC-BCCCE--ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred cCCC-ccceE--EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 3222 23333 47888877776655 78999999999887766532 346899999999988887765
Q ss_pred cEEEEeCCCcceeee--cccCccceEEEEEec-CCCeEEEE----ecCCeEEEEecc
Q 047355 254 TILIWNATTFRLQNT--LSSGLERVWSIGYKK-GSNQVAFG----CDNGTLIVKIGN 303 (312)
Q Consensus 254 ~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~----~~~g~i~v~~~~ 303 (312)
.|.+||..++++... +......+..++++| ++...++. ..+++|.+.-.+
T Consensus 245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 899999988776422 121246789999999 55555665 567777766443
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=2e-15 Score=140.79 Aligned_cols=269 Identities=9% Similarity=-0.060 Sum_probs=173.3
Q ss_pred cCCCCeEEEEecCC---eEEEEe--ccCCceeeeEEe------cCCceeEEEEeeCCcEEE-----EecCCCeEEEEEcc
Q 047355 26 HPTQPWVLASLYSG---TVCIWN--YHSQTTEKSVKV------TDSPVRTAKFVAREHWIV-----CGSDDKFIRVFDYN 89 (312)
Q Consensus 26 ~~~~~~l~~~~~dg---~v~iw~--~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-----~g~~dg~i~iwd~~ 89 (312)
.|+|++++....++ .-.+|- ...+.....+.. +...+....|+||+++|+ .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47899888776544 344554 434433332221 223578899999999998 55566899999999
Q ss_pred Cceeeeeecccccce--eEEEEecCCCEEEEEeCCCc-------------EEEEeCCCCce---eeeEecCCccceEEEE
Q 047355 90 TMASVKEFEAHEDYI--RSLAVHPTFPFVLTASDDKL-------------IKLWDWEKNWE---CTQTFEGHSHYVMQSA 151 (312)
Q Consensus 90 ~~~~~~~~~~h~~~i--~~~~~~~~~~~l~t~s~d~~-------------v~iwd~~~~~~---~~~~~~~~~~~v~~~~ 151 (312)
+++... ..+-..+ ..++|+|+++.|+.++.|.. |++|++.+... .+.....+...+....
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 887541 1122222 67899999999999988776 99999876532 2222233455778899
Q ss_pred eCCCCCCEEEEEeCCC----eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEe---CCCeEEEEeCCCCeE-
Q 047355 152 FNPKDLNTFASASLDG----TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGS---DDFTVKVWDYETKTC- 223 (312)
Q Consensus 152 ~~~~~~~~~~s~s~dg----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~---~dg~i~vwd~~~~~~- 223 (312)
|+|.+ ..++..+.++ .|++||..+.. ...+..+........+ +++.+++... .++.|.+||+.++..
T Consensus 234 ~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~---~~g~l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 234 LSRDG-KYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA---WKDRFYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp ECTTS-CCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE---ETTEEEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred ECCCC-CEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe---cCCcEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 99965 5555555444 67777655443 3344444444444332 3444444443 368899999977642
Q ss_pred --EEEeccc-ccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC-CcceeeecccC-ccceEEEEEecCCCeEEEEec----C
Q 047355 224 --VQILEGH-TNNVTAVCFHPELRIIITASEDGTILIWNAT-TFRLQNTLSSG-LERVWSIGYKKGSNQVAFGCD----N 294 (312)
Q Consensus 224 --~~~~~~h-~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~----~ 294 (312)
...+..+ ...+..++|+ ++.++++...|+..+||.+. +++....+..+ ...+..++++|+++.|+.... .
T Consensus 309 ~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P 387 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTP 387 (695)
T ss_dssp GCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEE
T ss_pred CCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence 3334433 4468889998 67889999999998888654 34545555544 456778889999988884433 3
Q ss_pred CeEEEEec
Q 047355 295 GTLIVKIG 302 (312)
Q Consensus 295 g~i~v~~~ 302 (312)
++++++-.
T Consensus 388 ~~v~~~d~ 395 (695)
T 2bkl_A 388 RQIYKTSV 395 (695)
T ss_dssp EEEEEEET
T ss_pred CEEEEEEC
Confidence 56666543
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=7.5e-14 Score=118.33 Aligned_cols=232 Identities=13% Similarity=0.090 Sum_probs=155.7
Q ss_pred cccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC----CeEEEEEccC
Q 047355 15 QKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD----KFIRVFDYNT 90 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~ 90 (312)
.+...+.+++|+|+++.++++..++.|.+||.++++...........+..+++.++++++++...+ +.|.+||.++
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 344567899999999977788889999999998776554443455678899999999877777666 6899999887
Q ss_pred ceeeeeec--ccccceeEEEEecCCCEEEEEeC------CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEE
Q 047355 91 MASVKEFE--AHEDYIRSLAVHPTFPFVLTASD------DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 91 ~~~~~~~~--~h~~~i~~~~~~~~~~~l~t~s~------d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 162 (312)
......+. .+...+.+++++|++.++++... .+.|..+|.... . ...+.........+.++|.+..++++
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-T-VTPIIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-C-EEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCC-E-EEEeecCCCcccceEECCCCCEEEEE
Confidence 65432332 24456899999999988776653 244555554332 1 12222222345678888854335566
Q ss_pred EeCCCeEEEEEcCCC-cceee--------ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccccc-
Q 047355 163 ASLDGTIQIWNMDSS-AAKFT--------LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTN- 232 (312)
Q Consensus 163 ~s~dg~v~iwd~~~~-~~~~~--------~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~- 232 (312)
.+.++.|.+||+++. ..... +.++ ..+..+ ..++++.++++...++.|.+||.. ++.+..+..+..
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i--~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~ 275 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSC--CIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRD 275 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEE--EEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGG
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCce--EECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCc
Confidence 667889999999642 22211 1111 233444 357788888887788999999984 556666554432
Q ss_pred -----CeEEEEEeCCCcEEEEEeCC
Q 047355 233 -----NVTAVCFHPELRIIITASED 252 (312)
Q Consensus 233 -----~i~~l~~~~~~~~l~s~s~d 252 (312)
.+.+++|+|+++.|+.++.+
T Consensus 276 ~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 276 EGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred cccccCcceEEECCCCCEEEEEeCc
Confidence 68999999998766655554
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=1.1e-15 Score=132.45 Aligned_cols=242 Identities=10% Similarity=-0.007 Sum_probs=150.7
Q ss_pred EEeccCCceeeeEEecCCc-----eeEEEEeeCCcEEEEecC---CCeEEEEEccCceeeeeecccccceeEEEEecCCC
Q 047355 43 IWNYHSQTTEKSVKVTDSP-----VRTAKFVAREHWIVCGSD---DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFP 114 (312)
Q Consensus 43 iw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~g~~---dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~ 114 (312)
..|..++.....+..+... +..+.|+|++++|+.... +..|.+||+.+++.......+......+.|+|+++
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 3355555554444333222 566789999999876643 24788889888765444333333333478999999
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeeEecCCccceEE-------------------EEeCCCCCCEEEEE-----eCCCeEE
Q 047355 115 FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ-------------------SAFNPKDLNTFASA-----SLDGTIQ 170 (312)
Q Consensus 115 ~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~s~-----s~dg~v~ 170 (312)
.|++++.++.+.+||+.... .......+...... ..++|.+ ..++.. ..+..|+
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLE-EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp EEEEEETTTEEEEEETTTCC-EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEE
T ss_pred EEEEEEcCCcEEEEECCCCC-cEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceEE
Confidence 99999999999999987653 22223323222211 2345532 333322 3566899
Q ss_pred EEEcCCCcceeeecccccceeEEEEEEcC-CceEEEEEeCC------CeEEEEeCCCCeEEEEeccc-ccCeEEEEEeCC
Q 047355 171 IWNMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGSDD------FTVKVWDYETKTCVQILEGH-TNNVTAVCFHPE 242 (312)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~h-~~~i~~l~~~~~ 242 (312)
+||+.+++..... .+...+..+.+ ++ ++..++..+.+ ..|.+||..+++........ ...+..++|+|+
T Consensus 172 ~~d~~~g~~~~~~-~~~~~~~~~~~--sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 172 KVDIETGELEVIH-QDTAWLGHPIY--RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp EEETTTCCEEEEE-EESSCEEEEEE--ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTT
T ss_pred EEECCCCcEEeec-cCCcccccceE--CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCC
Confidence 9999887654433 44455565554 56 67666655443 46889998766544433321 235888999999
Q ss_pred CcEEEEEeCC-----CcEEEEeCCCcceeeecccCccceEEEEEec-CCCeEEEEe
Q 047355 243 LRIIITASED-----GTILIWNATTFRLQNTLSSGLERVWSIGYKK-GSNQVAFGC 292 (312)
Q Consensus 243 ~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 292 (312)
+++|+.++.+ +.|++||+.+++........ ... +.|+| ||+.|++++
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEec
Confidence 9988777654 44999999887653322111 122 88999 999888765
No 192
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=1.8e-14 Score=123.77 Aligned_cols=216 Identities=13% Similarity=0.115 Sum_probs=145.6
Q ss_pred EEEEcCCCCeEEEEec----------CCeEEEEeccCCceeeeEEec------CCceeEEEEeeCCcEEEEecC--CCeE
Q 047355 22 SVDFHPTQPWVLASLY----------SGTVCIWNYHSQTTEKSVKVT------DSPVRTAKFVAREHWIVCGSD--DKFI 83 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~~----------dg~v~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~g~~--dg~i 83 (312)
.++|+||+++|+++.+ +++|.+||..+.+....+... ......+.+++++++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 8999999999998863 678999999888877777643 123456889999999998864 5899
Q ss_pred EEEEccCceeeee-ecccccceeEEEEecCC-CEEEEEeCCCcEEEEeCCCCceee------------------------
Q 047355 84 RVFDYNTMASVKE-FEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECT------------------------ 137 (312)
Q Consensus 84 ~iwd~~~~~~~~~-~~~h~~~i~~~~~~~~~-~~l~t~s~d~~v~iwd~~~~~~~~------------------------ 137 (312)
.+||+.+.+.+.. +.... ...+.+.|.+ ..+++.+.||.+.+|+........
T Consensus 134 ~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 9999999887766 43221 1112333433 233444445555444432210000
Q ss_pred -------------------------eEecCCc----------cceEEEEeCCCCCCEEEEEeC----------CCeEEEE
Q 047355 138 -------------------------QTFEGHS----------HYVMQSAFNPKDLNTFASASL----------DGTIQIW 172 (312)
Q Consensus 138 -------------------------~~~~~~~----------~~v~~~~~~~~~~~~~~s~s~----------dg~v~iw 172 (312)
..+.-.. .....+.++|.+...+++... .++|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 0000000 000014567654444444331 3489999
Q ss_pred EcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCC--eEEEEecccccCeEEEEEeCCCc
Q 047355 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETK--TCVQILEGHTNNVTAVCFHPELR 244 (312)
Q Consensus 173 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~i~~l~~~~~~~ 244 (312)
|+.+.+.+..+..+. +..+. ++++++++++++. +.|.+||.+++ +.+..+..+....+.++++|+|+
T Consensus 292 D~~t~~~v~~i~~~~--p~~ia--~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD--ALSMT--IDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTTTEEEEEEECTT--CCEEE--EETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcEEEEEecCC--eeEEE--ECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999999888887776 66665 4788888888887 99999999999 99998877788889999999985
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=1.4e-13 Score=124.58 Aligned_cols=260 Identities=12% Similarity=0.113 Sum_probs=178.0
Q ss_pred CCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEcc--Cceeeeeecccccce
Q 047355 27 PTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN--TMASVKEFEAHEDYI 104 (312)
Q Consensus 27 ~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~~~h~~~i 104 (312)
|.+..+++...+++|.++|..+.+.+..+.... ....+.|+++++++++++.|+.|.+||+. +.+.+.++..... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-A 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-C
Confidence 444456666788999999999988887776544 34588999999999999999999999995 7777766665433 5
Q ss_pred eEEEEe----cCCCEEEEEe-CCCcEEEEeCCCCceeeeEecC----------Ccc-ceEEEEeCCCCCCEEEEEeCCCe
Q 047355 105 RSLAVH----PTFPFVLTAS-DDKLIKLWDWEKNWECTQTFEG----------HSH-YVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 105 ~~~~~~----~~~~~l~t~s-~d~~v~iwd~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
..++++ |+++++++++ .++.+.++|..+. +.++.+.. |.. .+..+..++.+...+++...+|.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~-~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL-EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC-CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCC-cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 789999 6999887665 4689999997664 33333321 112 45566667765566777777899
Q ss_pred EEEEEcCCCcceeeec-ccccceeEEEEEEcCCceEEEEEe-CCCeEEEEeCCCCeEEEEecc-----cccCeEEEEEeC
Q 047355 169 IQIWNMDSSAAKFTLD-AHEKGINCIDYFITSDKVYLITGS-DDFTVKVWDYETKTCVQILEG-----HTNNVTAVCFHP 241 (312)
Q Consensus 169 v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~-----h~~~i~~l~~~~ 241 (312)
|.++|........... ......... .+++++++++++. .++.|.++|+.+++....+.- |.+.--.+ ++|
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~--~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p 398 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDG--GLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHP 398 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEE--EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EET
T ss_pred EEEEecCCCccceeeeeeccccccCc--eECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECC
Confidence 9999987653221111 111122333 3578888876655 688999999999988766643 33211122 588
Q ss_pred CCc-EEEEEe-CCCcEEEEeCCC-------cceeeecccCccceEEEEEecCCCeEEEEe
Q 047355 242 ELR-IIITAS-EDGTILIWNATT-------FRLQNTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 242 ~~~-~l~s~s-~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
++. .+++.. .++.|.++|..+ ++.+.++........-+..+|+++.|-+..
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred CCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 744 444543 568999999987 667776665433334567789988877765
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.70 E-value=6e-14 Score=115.91 Aligned_cols=213 Identities=14% Similarity=0.049 Sum_probs=161.2
Q ss_pred CCcEEEEecCCCeEEEEEccCceeeeeecccc-cceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCC-ccce
Q 047355 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHE-DYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGH-SHYV 147 (312)
Q Consensus 70 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~-~~~v 147 (312)
.++.|++++.++.|.+||.++++.+.++..+. ..+.++.+.|++++++ +.++.|..||. +. +.+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G-~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG-RELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS-CEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC-CEEEEEcCCCCccc
Confidence 36789999999999999998999888887765 4789999999999888 45778999997 44 445555544 2456
Q ss_pred EEEEeCCCCCCEEEEEeC-CCeEEEEEcCCCcceeeecc------cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCC
Q 047355 148 MQSAFNPKDLNTFASASL-DGTIQIWNMDSSAAKFTLDA------HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYET 220 (312)
Q Consensus 148 ~~~~~~~~~~~~~~s~s~-dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 220 (312)
....+.| +++.+++.+. ++.|..+|. .++.+..+.. +......+. +.+++.++++...++.|..||.+
T Consensus 80 ~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~--~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN--KNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE--ECTTSCEEEEETTTTEEEEECTT-
T ss_pred cccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce--ECCCCCEEEEecCCCEEEEECCC-
Confidence 6777877 4578888776 777877775 4444433321 111222222 46789999999999999999998
Q ss_pred CeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC------ccceEEEEEecCCCeEEEEe
Q 047355 221 KTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG------LERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 221 ~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~ 292 (312)
++.+..+..+ ..+.++.+.+++.++++++.+++|..+|..+++.+.++... ...+..++..++|+.+++..
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8888887754 45667888999999999998899999999989987777543 22377888889999998874
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.69 E-value=4.5e-13 Score=115.40 Aligned_cols=267 Identities=10% Similarity=-0.019 Sum_probs=176.0
Q ss_pred EEcCCCCeEEEEec--CC---eEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec----------CCCeEEEEEc
Q 047355 24 DFHPTQPWVLASLY--SG---TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS----------DDKFIRVFDY 88 (312)
Q Consensus 24 ~~~~~~~~l~~~~~--dg---~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~ 88 (312)
...|+++++++... .. +|.++|..+.+....+.....+ .+.++|++++++.+. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 45578888877653 33 8899999988877666554444 889999999999886 3678999999
Q ss_pred cCceeeeeeccc-------ccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeE-ecCCccceEEEEeCCCCCC
Q 047355 89 NTMASVKEFEAH-------EDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQT-FEGHSHYVMQSAFNPKDLN 158 (312)
Q Consensus 89 ~~~~~~~~~~~h-------~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 158 (312)
.+.+....+... ...-..++++|++++|+++.. ++.|.++| .+. +.... +.... . ..+.|....
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~-~~~~~~i~~~~-~---~~~~~~~~~ 178 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG-SSDDQLLSSPT-C---YHIHPGAPS 178 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC-CEEeEEcCCCc-e---EEEEeCCCc
Confidence 987776655322 123457899999999988764 57899999 765 33333 32211 1 233455556
Q ss_pred EEEEEeCCCeEEEEEcCCCcceeeec-----ccccce-eEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe--EEEEecc-
Q 047355 159 TFASASLDGTIQIWNMDSSAAKFTLD-----AHEKGI-NCIDYFITSDKVYLITGSDDFTVKVWDYETKT--CVQILEG- 229 (312)
Q Consensus 159 ~~~s~s~dg~v~iwd~~~~~~~~~~~-----~~~~~v-~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~- 229 (312)
.+++.+.||++.++|. +.+...... ....++ ....+... ++.+++. +..+.+.+.|+.+.. ....+.-
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~ 255 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK-SGRIVWP-VYSGKILQADISAAGATNKAPIDAL 255 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec-CCEEEEE-cCCceEEEEeccCCcceEeeeeeec
Confidence 7788889999999999 665442211 111111 11122222 2333333 367899999986542 2222211
Q ss_pred ---------cccCeEEEEEeCCCcEEEEEeC----------CCcEEEEeCCCcceeeecccCccceEEEEEecCCC-eEE
Q 047355 230 ---------HTNNVTAVCFHPELRIIITASE----------DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN-QVA 289 (312)
Q Consensus 230 ---------h~~~i~~l~~~~~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 289 (312)
.......++++|+++.+..... ++.|.++|..+++.+.++.. ....+.++|+|||+ .+.
T Consensus 256 ~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLY 334 (373)
T ss_pred CCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEE
Confidence 0122445789999887777653 35799999999998888753 34689999999999 666
Q ss_pred EEe-cCCeEEEEec
Q 047355 290 FGC-DNGTLIVKIG 302 (312)
Q Consensus 290 ~~~-~~g~i~v~~~ 302 (312)
++. .++.|.|.=.
T Consensus 335 v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 335 ALSAGTEVLHIYDA 348 (373)
T ss_pred EEcCCCCeEEEEEC
Confidence 666 4788877543
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.68 E-value=1.2e-13 Score=114.19 Aligned_cols=234 Identities=9% Similarity=-0.032 Sum_probs=167.7
Q ss_pred CCCeEEEEecCCeEEEEeccCCceeeeEEecC-CceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccc-ccee
Q 047355 28 TQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD-SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHE-DYIR 105 (312)
Q Consensus 28 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~i~ 105 (312)
.++.|++++.|+.|.+||.++++.+..+..+. ..+..+.+.++++.++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 35788999999999999998888887777655 4678889999999888 34678999998 677777777653 4788
Q ss_pred EEEEecCCCEEEEEeC-CCcEEEEeCCCCceeeeEec------CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCc
Q 047355 106 SLAVHPTFPFVLTASD-DKLIKLWDWEKNWECTQTFE------GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSA 178 (312)
Q Consensus 106 ~~~~~~~~~~l~t~s~-d~~v~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~ 178 (312)
++.+.++++++++.+. ++.+..+|... +.+..+. .+......+...+ +++++++.+.++.|..||.. ++
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~G--k~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMKG--EVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTTS--CEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SC
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCCC--CEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CC
Confidence 9999999999998776 67777777532 3333222 1111222234455 56889999999999999998 77
Q ss_pred ceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccc------cCeEEEEEeCCCcEEEEEeCC
Q 047355 179 AKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT------NNVTAVCFHPELRIIITASED 252 (312)
Q Consensus 179 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~------~~i~~l~~~~~~~~l~s~s~d 252 (312)
.+..+.... ...... ..+++.++++++.++.|..+|..+++.+..+..+. ..+..++..+++.++++....
T Consensus 157 ~~w~~~~~~-~~~~~~--~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 157 LLNSVKLSG-TPFSSA--FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp EEEEEECSS-CCCEEE--ECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred EEEEEECCC-Ccccee--EcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 777765542 233332 46788889988888899999999999988876432 237888999999988877411
Q ss_pred --------CcEEEEeC-CCcceeeeccc
Q 047355 253 --------GTILIWNA-TTFRLQNTLSS 271 (312)
Q Consensus 253 --------g~v~iwd~-~~~~~~~~~~~ 271 (312)
+..+++++ ++++++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp TCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred ccccccccCCceEEEECCCCCEEEEecC
Confidence 23355555 45666554443
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=5e-14 Score=120.41 Aligned_cols=270 Identities=13% Similarity=0.110 Sum_probs=185.5
Q ss_pred EEEEcCCCCeEEEEec-----CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec----------CCCeEEEE
Q 047355 22 SVDFHPTQPWVLASLY-----SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS----------DDKFIRVF 86 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~~-----dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iw 86 (312)
.....|++.++++... ++.|.+.|..+.+.+..+.....+ .+.++|++++++.+. .++.|.+|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 4566899999988865 689999999999988888776666 399999999988775 36789999
Q ss_pred EccCceeeeeecccc-------cceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCC
Q 047355 87 DYNTMASVKEFEAHE-------DYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157 (312)
Q Consensus 87 d~~~~~~~~~~~~h~-------~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 157 (312)
|..+.+....+.... ..-..++++|+++++..+.. ++.|.++|..+. +....+.-... ....|.+.
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~-~vv~tI~v~g~----~~~~P~g~ 189 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-AFKRMLDVPDC----YHIFPTAP 189 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEEEECCSE----EEEEEEET
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-cEEEEEECCCc----ceeecCCC
Confidence 999988877764321 23456899999999887763 689999998876 33444432111 12234455
Q ss_pred CEEEEEeCCCeEEEEEcCC-Ccceeeeccc----cccee-EEEEEEcCCceEEEEEeCCCeEEEEeCCCCe--EEEEec-
Q 047355 158 NTFASASLDGTIQIWNMDS-SAAKFTLDAH----EKGIN-CIDYFITSDKVYLITGSDDFTVKVWDYETKT--CVQILE- 228 (312)
Q Consensus 158 ~~~~s~s~dg~v~iwd~~~-~~~~~~~~~~----~~~v~-~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~- 228 (312)
..+++.+.||++.+.++.. ++.......+ ...+. ...| ..++|++++ .+.+|+|++.|..+.. ....+.
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~-~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY-SQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE-ETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred ceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee-EcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence 6788889999999999976 4432211111 11111 1122 246776554 5568999999987553 222221
Q ss_pred --------c-cccCeEEEEEeCCCcEEEEEeC----------CCcEEEEeCCCcceeeecccCccceEEEEEecCCC-eE
Q 047355 229 --------G-HTNNVTAVCFHPELRIIITASE----------DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN-QV 288 (312)
Q Consensus 229 --------~-h~~~i~~l~~~~~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 288 (312)
+ ..+....++++++++.++.... .++|.+.|..+++.+.++.-. .++++++|++|++ .|
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLL 346 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEE
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEE
Confidence 0 1223446888998887777643 257999999999998877644 4789999999997 55
Q ss_pred EEEe-cCCeEEEEe
Q 047355 289 AFGC-DNGTLIVKI 301 (312)
Q Consensus 289 ~~~~-~~g~i~v~~ 301 (312)
.++. .++.+.|.=
T Consensus 347 y~tn~~~~~VsViD 360 (386)
T 3sjl_D 347 YALSTGDKTLYIHD 360 (386)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEcCCCCeEEEEE
Confidence 5544 377777643
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.66 E-value=2.2e-14 Score=134.82 Aligned_cols=239 Identities=8% Similarity=-0.016 Sum_probs=157.0
Q ss_pred cEEEEEEcCCCCeEEEEecC-----CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCe-----------
Q 047355 19 RVKSVDFHPTQPWVLASLYS-----GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKF----------- 82 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~----------- 82 (312)
.+..++|+|||++|+.+..+ ..|++||+.+++.... ......+..+.|+++ +.|+.++.++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 68899999999999877654 3599999998876543 222222356789999 88887776543
Q ss_pred ---EEEEEccCcee--eeeec--ccccceeEEEEecCCCEEEEEeCCC-----cEEEEeCCCCcee-eeEecCCccceEE
Q 047355 83 ---IRVFDYNTMAS--VKEFE--AHEDYIRSLAVHPTFPFVLTASDDK-----LIKLWDWEKNWEC-TQTFEGHSHYVMQ 149 (312)
Q Consensus 83 ---i~iwd~~~~~~--~~~~~--~h~~~i~~~~~~~~~~~l~t~s~d~-----~v~iwd~~~~~~~-~~~~~~~~~~v~~ 149 (312)
|++|++.+... ...+. .+...+..+.++|++++|+..+.++ .+.+||+...... ...+..+......
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 88999876542 22232 3334588999999999988776543 7999998654212 3344444444443
Q ss_pred EEeCCCCCCEEEEEeC----CCeEEEEEcCCC--cceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCC-CCe
Q 047355 150 SAFNPKDLNTFASASL----DGTIQIWNMDSS--AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYE-TKT 222 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~----dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~ 222 (312)
..+ | ++..|+..+. ++.|.+||+.+. .....+..+...+..+.+ . ++.++++...|+..++|... +++
T Consensus 322 ~~~-~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~--~-~~~lv~~~~~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 322 FVD-G-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI--A-GNRLFASYIHDAKSQVLAFDLDGK 396 (741)
T ss_dssp EEE-E-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE--E-BTEEEEEEEETTEEEEEEEETTSC
T ss_pred EEe-c-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE--E-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 333 4 3456666554 346999999874 223333344444444443 3 56788888899987777543 355
Q ss_pred EEEEecc-cccCeEEEEEeCCCcEEE-EEe---CCCcEEEEeCCCcc
Q 047355 223 CVQILEG-HTNNVTAVCFHPELRIII-TAS---EDGTILIWNATTFR 264 (312)
Q Consensus 223 ~~~~~~~-h~~~i~~l~~~~~~~~l~-s~s---~dg~v~iwd~~~~~ 264 (312)
....+.. +...+..++++|+++.++ +.+ ..++|++||+.+++
T Consensus 397 ~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 397 PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 5565654 356789999999887555 322 34789999998765
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=1.5e-13 Score=115.23 Aligned_cols=240 Identities=7% Similarity=0.037 Sum_probs=157.5
Q ss_pred cccCcEEEEEEcCCCCeEEE-------EecCCeEEEEeccCCceeeeEEe-----cCCceeEEEEeeC-CcEEEEecCCC
Q 047355 15 QKSDRVKSVDFHPTQPWVLA-------SLYSGTVCIWNYHSQTTEKSVKV-----TDSPVRTAKFVAR-EHWIVCGSDDK 81 (312)
Q Consensus 15 ~~~~~i~~~~~~~~~~~l~~-------~~~dg~v~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~g~~dg 81 (312)
..-....+++|++++..+++ +..++.|.+||..+++.. .+.. +...+..+.+.++ +.++++. ..+
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRL 92 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEE-TTT
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEE-CCC
Confidence 33456789999999987777 678899999998766543 2222 2345778888888 6544444 344
Q ss_pred eEEEEEccCceeeee-ec----ccccceeEEEEecCCCEEEEEeCC---------------CcEEEEeCCCCceeeeEec
Q 047355 82 FIRVFDYNTMASVKE-FE----AHEDYIRSLAVHPTFPFVLTASDD---------------KLIKLWDWEKNWECTQTFE 141 (312)
Q Consensus 82 ~i~iwd~~~~~~~~~-~~----~h~~~i~~~~~~~~~~~l~t~s~d---------------~~v~iwd~~~~~~~~~~~~ 141 (312)
.|.+||.+ ++.... .. .+...+.++++.+++.+.++...+ +.+..||.. . .. ..+.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~-~~~~ 168 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G-QM-IQVD 168 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S-CE-EEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C-CE-EEec
Confidence 78899987 544322 21 112458899999999887776554 456666654 2 22 1122
Q ss_pred CCccceEEEEeC----CCCCCEEEEEeCCCeEEEEEcC-CCcc-----eeeecccc-cceeEEEEEEcCCceEEEEEeCC
Q 047355 142 GHSHYVMQSAFN----PKDLNTFASASLDGTIQIWNMD-SSAA-----KFTLDAHE-KGINCIDYFITSDKVYLITGSDD 210 (312)
Q Consensus 142 ~~~~~v~~~~~~----~~~~~~~~s~s~dg~v~iwd~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~~~l~sg~~d 210 (312)
.+......+.++ |.+..++++...++.|.+||++ .+.. ...+..+. .....+ ..++++.++++...+
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i--~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM--DFDEDNNLLVANWGS 246 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE--EEBTTCCEEEEEETT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce--EECCCCCEEEEEcCC
Confidence 222334566777 7443345555678999999986 3321 11222222 233444 357788888887788
Q ss_pred CeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcE-EEEEeCCCcEEEEeCCC
Q 047355 211 FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI-IITASEDGTILIWNATT 262 (312)
Q Consensus 211 g~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~-l~s~s~dg~v~iwd~~~ 262 (312)
+.|.+||..+++....+..+...+.+++|+|+++. +++...++.|..|+...
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999999866666666666678999999999984 45555678999999865
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=9.7e-14 Score=130.39 Aligned_cols=269 Identities=10% Similarity=0.002 Sum_probs=171.0
Q ss_pred cCCCCeEEEEecCCe---EEEEecc-----CCceeeeEE------ecCCceeEEEEeeCCcEEEEecCC-----CeEEEE
Q 047355 26 HPTQPWVLASLYSGT---VCIWNYH-----SQTTEKSVK------VTDSPVRTAKFVAREHWIVCGSDD-----KFIRVF 86 (312)
Q Consensus 26 ~~~~~~l~~~~~dg~---v~iw~~~-----~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iw 86 (312)
.|+|++++....++. -.+|-.+ .......+. .+...+....|+||+++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489999887665543 5566543 333222211 112257788999999998876543 469999
Q ss_pred EccCceeeeeecccccceeEEEEecCCCEEEEEeCCCc--------------EEEEeCCCCcee-eeEec--CCccceEE
Q 047355 87 DYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL--------------IKLWDWEKNWEC-TQTFE--GHSHYVMQ 149 (312)
Q Consensus 87 d~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~--------------v~iwd~~~~~~~-~~~~~--~~~~~v~~ 149 (312)
|+.+++.... ..+...+..++|+|+ +.|+.++.++. |++|++.+.... ...+. .+...+..
T Consensus 195 dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 9999876543 222223467899999 98888877654 888998654321 12233 23345788
Q ss_pred EEeCCCCCCEEEEEeCC-----CeEEEEEcCCC--cceeeecccccceeEEEEEEcCCceEEEEEeC----CCeEEEEeC
Q 047355 150 SAFNPKDLNTFASASLD-----GTIQIWNMDSS--AAKFTLDAHEKGINCIDYFITSDKVYLITGSD----DFTVKVWDY 218 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~d-----g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~----dg~i~vwd~ 218 (312)
..|+|. +..++..+.+ ..|++||+.+. +....+..+........ .+++..|+..+. ++.|.+||+
T Consensus 273 ~~~SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~---~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 273 ASVSSD-GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV---DGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEECTT-SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE---EEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEECCC-CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE---eccCCEEEEEECCCCCCCEEEEEeC
Confidence 899985 4566655543 38999999876 31344444444433331 245555655554 456999999
Q ss_pred CCC--eEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC-Ccceeeeccc-CccceEEEEEecCCCeEEEEec-
Q 047355 219 ETK--TCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT-TFRLQNTLSS-GLERVWSIGYKKGSNQVAFGCD- 293 (312)
Q Consensus 219 ~~~--~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~- 293 (312)
.++ +....+..+...+..++++ ++.++++...|+..+||... +++....+.. ....+..++++|+++.|+....
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEE
T ss_pred CCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 874 4455555555667788887 56788999999987777543 3455555543 3566888999999988774433
Q ss_pred ---CCeEEEEe
Q 047355 294 ---NGTLIVKI 301 (312)
Q Consensus 294 ---~g~i~v~~ 301 (312)
.++++++-
T Consensus 428 ~~~P~~i~~~d 438 (741)
T 1yr2_A 428 FTQPATVLALD 438 (741)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 45666654
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=1e-12 Score=111.43 Aligned_cols=252 Identities=8% Similarity=-0.007 Sum_probs=166.4
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec-CCCeEEEEEccCceeeee
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~ 96 (312)
+....++++. +...++...++.|.+||..+.+.+..+.. ......+++++++. ++.+. .++.|.+||..+.+....
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEE
Confidence 4567888843 33444455679999999998888777753 34567788888884 55554 889999999999887766
Q ss_pred ecccc-----cceeEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC----
Q 047355 97 FEAHE-----DYIRSLAVHPTFPFVLTAS-DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD---- 166 (312)
Q Consensus 97 ~~~h~-----~~i~~~~~~~~~~~l~t~s-~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d---- 166 (312)
+.... .....+++ ..+.++++.. .++.|.++|..+. .....+.... ....+.++|. +.+++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~-~~~~~i~~g~-~p~~i~~~~d-G~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD-KVVDELTIGI-QPTSLVMDKY-NKMWTITDGGYEGS 196 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT-EEEEEEECSS-CBCCCEECTT-SEEEEEBCCBCTTC
T ss_pred EEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC-eEEEEEEcCC-CccceEEcCC-CCEEEEECCCccCC
Confidence 65433 14556777 3444444443 4889999998765 3333333222 2245667774 4566665544
Q ss_pred ------CeEEEEEcCCCcceeeecccc-cceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE--EecccccCeEEE
Q 047355 167 ------GTIQIWNMDSSAAKFTLDAHE-KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ--ILEGHTNNVTAV 237 (312)
Q Consensus 167 ------g~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~~i~~l 237 (312)
+.|.++|..+.+....+.... .....++ +++++.++..... .|.+||..+++... .+..+......+
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la--~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi 272 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQ--LNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGL 272 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEE--ECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEE
T ss_pred ccccCCceEEEEECCCCeEEEEEecCCCCCceeEE--EecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEE
Confidence 789999998877665543321 2345554 5777777766644 89999998776532 122224568899
Q ss_pred EEeC-CCcEEEEE----eCCCcEEEEeCCCcceeeecccCccceEEEEEe
Q 047355 238 CFHP-ELRIIITA----SEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282 (312)
Q Consensus 238 ~~~~-~~~~l~s~----s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 282 (312)
+++| ++.++++. ..++.|.+||.. ++++.++.. ......++|-
T Consensus 273 ~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~~ 320 (328)
T 3dsm_A 273 TVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCWK 320 (328)
T ss_dssp EECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEEE
T ss_pred EEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEEe
Confidence 9999 56666666 678999999987 888777653 3345566654
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=7.7e-12 Score=103.85 Aligned_cols=237 Identities=7% Similarity=-0.051 Sum_probs=158.6
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe--cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASV 94 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 94 (312)
...+.++++++++...++...++.|..|+.+. + ...+.. ....+..+.+.+++...++...++.|..||. ++...
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKG-I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCC-c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 45789999999998777776789999999763 2 233332 2345778888888887777777889999998 43332
Q ss_pred e-eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEE
Q 047355 95 K-EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173 (312)
Q Consensus 95 ~-~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd 173 (312)
. ....+...+..+++.+++.+.++...++.+..||. ...............+..+.+++. +.++++...++.|..||
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEEC
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEEC
Confidence 2 22334456889999999988777777789999997 332211112333445677888875 46666666688999999
Q ss_pred cCCCccee-eecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEE-ecccccCeEEEEEeCCCcEEEEEeC
Q 047355 174 MDSSAAKF-TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQI-LEGHTNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 174 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~~i~~l~~~~~~~~l~s~s~ 251 (312)
. ++.... ....+...+..+. .++++.++++...++.|..||. +++.... +..+...+.++++ +++.++++..
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~--~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~- 284 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAIT--AGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME- 284 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEE--ECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-
T ss_pred C-CCcEEEEECCCCCCCceeEE--ECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-
Confidence 8 544322 1222334455554 5677887776667889999998 4543332 3445567999999 8888776655
Q ss_pred CCcEEEEeCCCcc
Q 047355 252 DGTILIWNATTFR 264 (312)
Q Consensus 252 dg~v~iwd~~~~~ 264 (312)
.+.+..++..+.+
T Consensus 285 ~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 285 CDKIGKLTLIKDN 297 (299)
T ss_dssp TTEEEEEEEC---
T ss_pred CCcEEEEEcCccc
Confidence 5667777766543
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=1.6e-12 Score=113.45 Aligned_cols=236 Identities=9% Similarity=0.016 Sum_probs=162.9
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCC--eEEEEEccCceeee
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK--FIRVFDYNTMASVK 95 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~ 95 (312)
.....|+|+|+++.+++...++.|++||.+++........... .. +++.++++.|+.+..++ .|..++..+.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4688999999998777777789999999987655444333222 33 88999999999888765 78888877554333
Q ss_pred ee----cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeee-E--ecCCccce-E-EEEeCCCCCCEEEEEeCC
Q 047355 96 EF----EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ-T--FEGHSHYV-M-QSAFNPKDLNTFASASLD 166 (312)
Q Consensus 96 ~~----~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~-~--~~~~~~~v-~-~~~~~~~~~~~~~s~s~d 166 (312)
.+ ........+++++|++..|+.+..++.|+.||......... . ..++.... . .++|+|.+..++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 22445678899999555565577788999999865432211 0 11121111 2 788998666777777888
Q ss_pred CeEEEEEcCCCcceeeecccc---------------cceeEEEEEEcCCceEEEEEe-CCCeEEEEeCCCCeEEEEeccc
Q 047355 167 GTIQIWNMDSSAAKFTLDAHE---------------KGINCIDYFITSDKVYLITGS-DDFTVKVWDYETKTCVQILEGH 230 (312)
Q Consensus 167 g~v~iwd~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h 230 (312)
+.|+.|+.+.. ...+.++. .....++ +++++.++++-. .++.|+.|+..++.. ..+.++
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia--~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMT--VDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEE--ECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEE--EeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 99999998654 22222221 1234444 578888888888 899999999777764 334433
Q ss_pred ---------------ccCeEEEEEeCCCcEEEEEeCCCcEEEEeC
Q 047355 231 ---------------TNNVTAVCFHPELRIIITASEDGTILIWNA 260 (312)
Q Consensus 231 ---------------~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~ 260 (312)
-.....+++++++.++++-..+++|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 235889999999888888888888988764
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.61 E-value=1e-12 Score=112.28 Aligned_cols=255 Identities=10% Similarity=0.068 Sum_probs=163.0
Q ss_pred EEEEcCCCCeEEEEe----------cCCeEEEEeccCCceeeeEEecC-------CceeEEEEeeCCcEEEEecC--CCe
Q 047355 22 SVDFHPTQPWVLASL----------YSGTVCIWNYHSQTTEKSVKVTD-------SPVRTAKFVAREHWIVCGSD--DKF 82 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~----------~dg~v~iw~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~g~~--dg~ 82 (312)
.++++|||++|+++. .++.|.+||..+.+....+.... ..-..+.|++++++++.+.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999998775 36789999999988888776532 12345789999999998864 689
Q ss_pred EEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEe----cCCccce-EEEEeCCCCC
Q 047355 83 IRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF----EGHSHYV-MQSAFNPKDL 157 (312)
Q Consensus 83 i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~----~~~~~~v-~~~~~~~~~~ 157 (312)
|.++|+.+.+.+.++..... ...+......+++.+.||.+.+.+........... .....++ ....|.+.++
T Consensus 162 VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 99999999988877753221 12222234456677778888888875422221111 1111111 1123433343
Q ss_pred CEEEEEeCCCeEEEEEcCCCcce--eeec---------c-cccceeEEEEEEcCCceEEEEEeC----------CCeEEE
Q 047355 158 NTFASASLDGTIQIWNMDSSAAK--FTLD---------A-HEKGINCIDYFITSDKVYLITGSD----------DFTVKV 215 (312)
Q Consensus 158 ~~~~s~s~dg~v~iwd~~~~~~~--~~~~---------~-~~~~v~~~~~~~~~~~~~l~sg~~----------dg~i~v 215 (312)
.++..+.+|+|.+.|+.+.... ..+. + ...+...+.+ ++++..+..... ..+|.+
T Consensus 239 -~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~--~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 239 -RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY--HRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp -EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEE--ETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred -cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeE--CCCCCeEEEEeccccccccCCCCCEEEE
Confidence 4444667899999999765421 1111 0 0112223333 344444433321 257999
Q ss_pred EeCCCCeEEEEecccccCeEEEEEeCCCc-EEEE-EeCCCcEEEEeCCCcceeeecccCccceEEEEEecC
Q 047355 216 WDYETKTCVQILEGHTNNVTAVCFHPELR-IIIT-ASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKG 284 (312)
Q Consensus 216 wd~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s-~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 284 (312)
+|+.+++.+..+.. ...+++|++++|++ +|++ ...++.|.++|..+++.+.++... .....+.+++|
T Consensus 316 iD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 316 LDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 99999999888763 34688999999986 5555 455899999999999998877654 23334445554
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=9.6e-12 Score=107.11 Aligned_cols=238 Identities=8% Similarity=-0.026 Sum_probs=156.0
Q ss_pred EEEEcCCCCeEEEEe----------cCCeEEEEeccCCceeeeEEec-------CCceeEEEEeeCCcEEEEecC--CCe
Q 047355 22 SVDFHPTQPWVLASL----------YSGTVCIWNYHSQTTEKSVKVT-------DSPVRTAKFVAREHWIVCGSD--DKF 82 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~----------~dg~v~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~--dg~ 82 (312)
.++|+||+++|+++. .++.|.+||..+.+....+... ...-..+.++|++++|+.+.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999999886 3678999999887776665433 112236789999999998874 578
Q ss_pred EEEEEccCceeeee-ecccccceeEEEEecCC-CEEEEEeCCCcEEEEeCCCCceeeeE-----ecCCccceEEEEeCCC
Q 047355 83 IRVFDYNTMASVKE-FEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQT-----FEGHSHYVMQSAFNPK 155 (312)
Q Consensus 83 i~iwd~~~~~~~~~-~~~h~~~i~~~~~~~~~-~~l~t~s~d~~v~iwd~~~~~~~~~~-----~~~~~~~v~~~~~~~~ 155 (312)
|.++| .+++.... +.... ++.+.|.+ ..+++.+.||.+.++|. ........ +.+.........+.+.
T Consensus 150 v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 98887766 54322 23444554 34556778999999998 44222111 1111111122334444
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcce--eeeccc----------ccceeEEEEEEcCCceEEEEEeC----------CCeE
Q 047355 156 DLNTFASASLDGTIQIWNMDSSAAK--FTLDAH----------EKGINCIDYFITSDKVYLITGSD----------DFTV 213 (312)
Q Consensus 156 ~~~~~~s~s~dg~v~iwd~~~~~~~--~~~~~~----------~~~v~~~~~~~~~~~~~l~sg~~----------dg~i 213 (312)
+..++++ +..+.+.+.|+.+.... ..+... ..+...+. +++++..+..... ++.|
T Consensus 224 ~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~--~s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 224 SGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA--YLKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred CCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE--ECCCCCEEEEEeccCCcccccCCCCeE
Confidence 4333333 46789999998754321 111100 01111222 4666665555432 3589
Q ss_pred EEEeCCCCeEEEEecccccCeEEEEEeCCCc-EEEEEe-CCCcEEEEeCCCcceeeec
Q 047355 214 KVWDYETKTCVQILEGHTNNVTAVCFHPELR-IIITAS-EDGTILIWNATTFRLQNTL 269 (312)
Q Consensus 214 ~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~s-~dg~v~iwd~~~~~~~~~~ 269 (312)
.++|..+++.+..+.. .....+++|+||++ +++++. .++.|.+||..+++.+.++
T Consensus 301 ~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 301 TSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 9999999999888853 44578999999999 777777 5899999999999988774
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.2e-11 Score=103.52 Aligned_cols=235 Identities=10% Similarity=0.082 Sum_probs=153.6
Q ss_pred ceeEEEEeeCCcEEEE-------ecCCCeEEEEEccCceeeeeec----ccccceeEEEEecC-CCEEEEEeCCCcEEEE
Q 047355 61 PVRTAKFVAREHWIVC-------GSDDKFIRVFDYNTMASVKEFE----AHEDYIRSLAVHPT-FPFVLTASDDKLIKLW 128 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~-------g~~dg~i~iwd~~~~~~~~~~~----~h~~~i~~~~~~~~-~~~l~t~s~d~~v~iw 128 (312)
....++|.+++..+++ +..++.|..||..+++...... ++...+.+++++++ +.++++.. .+.+.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEE
Confidence 4567888888887777 5778999999987765432221 25567899999998 66555444 4478889
Q ss_pred eCCCCceeeeE-ec---C-CccceEEEEeCCCCCCEEEEEeCC---------------CeEEEEEcCCCcceeeeccccc
Q 047355 129 DWEKNWECTQT-FE---G-HSHYVMQSAFNPKDLNTFASASLD---------------GTIQIWNMDSSAAKFTLDAHEK 188 (312)
Q Consensus 129 d~~~~~~~~~~-~~---~-~~~~v~~~~~~~~~~~~~~s~s~d---------------g~v~iwd~~~~~~~~~~~~~~~ 188 (312)
|.. . ..... .. . ....+..+.++|. +.++++...+ +.|..||.. ++.. .+..+..
T Consensus 98 d~~-g-~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~ 172 (314)
T 1pjx_A 98 QTD-G-TFEEIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQ 172 (314)
T ss_dssp ETT-S-CEEECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEES
T ss_pred eCC-C-CEEEEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-EeccCCC
Confidence 976 3 22111 11 1 1234667888874 4666666554 567777765 3322 2222223
Q ss_pred ceeEEEEEEc----CCceE-EEEEeCCCeEEEEeCC-CCe-----EEEEecccc-cCeEEEEEeCCCcEEEEEeCCCcEE
Q 047355 189 GINCIDYFIT----SDKVY-LITGSDDFTVKVWDYE-TKT-----CVQILEGHT-NNVTAVCFHPELRIIITASEDGTIL 256 (312)
Q Consensus 189 ~v~~~~~~~~----~~~~~-l~sg~~dg~i~vwd~~-~~~-----~~~~~~~h~-~~i~~l~~~~~~~~l~s~s~dg~v~ 256 (312)
....+. ++ +++.. +++...++.|.+||.. +++ ....+..+. ..+..++++++++++++...++.|.
T Consensus 173 ~~~~i~--~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 173 FPNGIA--VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp SEEEEE--EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CcceEE--EecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 344454 35 77754 4555678899999975 443 223334443 5688999999999888888889999
Q ss_pred EEeCCCcceeeecccCccceEEEEEecCCCeEEEEe-cCCeEEEEecc
Q 047355 257 IWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGC-DNGTLIVKIGN 303 (312)
Q Consensus 257 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~v~~~~ 303 (312)
+||..+++....+..+...+.+++|+|+++.|..++ .++.|...-.+
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 999887776666665667899999999999555444 45666554433
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.58 E-value=1.1e-12 Score=114.13 Aligned_cols=266 Identities=13% Similarity=0.083 Sum_probs=179.0
Q ss_pred CCCCeEEEEecC-----CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec----------CCCeEEEEEccCc
Q 047355 27 PTQPWVLASLYS-----GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS----------DDKFIRVFDYNTM 91 (312)
Q Consensus 27 ~~~~~l~~~~~d-----g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~~~ 91 (312)
|+++++++.... +.|.+.|..+.+.+..+.....+ .+.+++++++++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 577777776553 69999999999998888877767 799999999998876 3678999999998
Q ss_pred eeeeeeccc-------ccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEE
Q 047355 92 ASVKEFEAH-------EDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFAS 162 (312)
Q Consensus 92 ~~~~~~~~h-------~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 162 (312)
+....+... ...-..+.++|++++++.+.. ++.|.+.|..+. +....+.-... ....|.+...+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~-kvv~~I~v~g~----~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK-TFDRMLDVPDC----YHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEEEECCSE----EEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC-eEEEEEEcCCc----eeeccCCCcEEEE
Confidence 877766422 123456899999999988764 578999998875 33333332111 1223333467778
Q ss_pred EeCCCeEEEEEcCCCcceee----eccccccee-EEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE--Eec---c---
Q 047355 163 ASLDGTIQIWNMDSSAAKFT----LDAHEKGIN-CIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ--ILE---G--- 229 (312)
Q Consensus 163 ~s~dg~v~iwd~~~~~~~~~----~~~~~~~v~-~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~---~--- 229 (312)
.+.||++.+.++.+++.... +.....++. .+. ..+++..++..+..+.|.+.|........ .+. .
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~--~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPA--FSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCE--ECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEee--ecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 88899988888855443321 111111111 111 24555555555678899999986543221 111 0
Q ss_pred ----cccCeEEEEEeCCCcEEEEEeC----------CCcEEEEeCCCcceeeecccCccceEEEEEecCCC-eEEEEe-c
Q 047355 230 ----HTNNVTAVCFHPELRIIITASE----------DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSN-QVAFGC-D 293 (312)
Q Consensus 230 ----h~~~i~~l~~~~~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~ 293 (312)
.......++++|+++.++.... ++.|.++|..+.+.+.++.-. ...+.++|+|||+ .+.++. .
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETT
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCC
Confidence 0112224789999887666542 357999999999998887533 3689999999999 777777 4
Q ss_pred CCeEEEEec
Q 047355 294 NGTLIVKIG 302 (312)
Q Consensus 294 ~g~i~v~~~ 302 (312)
++.|.|.=.
T Consensus 392 s~~VsVID~ 400 (426)
T 3c75_H 392 TQTLHIYDA 400 (426)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEC
Confidence 788776543
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=1.3e-13 Score=118.29 Aligned_cols=171 Identities=12% Similarity=0.070 Sum_probs=131.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc----------eeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEE
Q 047355 103 YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW----------ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iw 172 (312)
.+..+++++...++++|+.++ +++|++.... +..... .+.. +..+.| ++..++++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 588999999999999999874 6669854221 111222 3455 899999 45788888 88999999
Q ss_pred EcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCC
Q 047355 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASED 252 (312)
Q Consensus 173 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d 252 (312)
|+++......+..|+.++..+.+ .+. . +++++.||.|.+||+.++.... +...|++++|+|+| ++.|..|
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~--~~p-~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKN--VNN-T-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEE--CSS-E-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred EchhhhccCccceeecceeeEEe--cCC-C-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 99887766666677777776553 222 2 8888999999999998877653 45689999999999 7889999
Q ss_pred CcEEEEeCCCcce--eeec------c---cCccceEEEEEecCCCeEEE
Q 047355 253 GTILIWNATTFRL--QNTL------S---SGLERVWSIGYKKGSNQVAF 290 (312)
Q Consensus 253 g~v~iwd~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~ 290 (312)
|.+++|+....+. ..++ . .+...|.++.|.++++.|++
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999998877664 4444 2 25678999999999998886
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=1.2e-12 Score=121.94 Aligned_cols=243 Identities=13% Similarity=0.089 Sum_probs=154.1
Q ss_pred ccCcEEEEEEcCCCCeEEEEe-----cCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCC---------
Q 047355 16 KSDRVKSVDFHPTQPWVLASL-----YSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK--------- 81 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~-----~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg--------- 81 (312)
+...+..++|+|||++||.+. ....|++||+++++.... .........+.|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 334788999999999988543 235799999998875432 2222113466899 999888887764
Q ss_pred ----eEEEEEccCcee----eeeecc-cccceeEEEEecCCCEEEEEe----CCCcEEEEeCCCCceeeeEecCCccceE
Q 047355 82 ----FIRVFDYNTMAS----VKEFEA-HEDYIRSLAVHPTFPFVLTAS----DDKLIKLWDWEKNWECTQTFEGHSHYVM 148 (312)
Q Consensus 82 ----~i~iwd~~~~~~----~~~~~~-h~~~i~~~~~~~~~~~l~t~s----~d~~v~iwd~~~~~~~~~~~~~~~~~v~ 148 (312)
.|++|++.+... +..... |.....++.++|++++|+... .+..+.++|+.........+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 499999876542 222233 445578899999999875433 2358899998655333444554544444
Q ss_pred EEEeCCCCCCEEEEEeCC---CeEEEEEcCCCcc--eeeecccccceeEEEEEEcCCceEEEEE-eCCC--eEEEEeCCC
Q 047355 149 QSAFNPKDLNTFASASLD---GTIQIWNMDSSAA--KFTLDAHEKGINCIDYFITSDKVYLITG-SDDF--TVKVWDYET 220 (312)
Q Consensus 149 ~~~~~~~~~~~~~s~s~d---g~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg-~~dg--~i~vwd~~~ 220 (312)
.. +++.+..+++....+ +.|..+|+.+... ...+..|...+. .+ ++++..|+.. ..++ .|++||...
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~--s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TV--HSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EE--EEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EE--EEECCEEEEEEEECCeeEEEEEECCC
Confidence 33 444444455555443 6799999987654 234555554443 43 3344445444 4454 688999875
Q ss_pred CeEEEEecccccCeEEEEEeCCCcEEEEEeCC----CcEEEEeCCCcce
Q 047355 221 KTCVQILEGHTNNVTAVCFHPELRIIITASED----GTILIWNATTFRL 265 (312)
Q Consensus 221 ~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~d----g~v~iwd~~~~~~ 265 (312)
+........+...+..+.++++++.++....+ +++..||+.+++.
T Consensus 360 ~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 54333222344567788888888766655444 7899999877653
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=2.5e-11 Score=105.90 Aligned_cols=231 Identities=8% Similarity=0.023 Sum_probs=157.0
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCC--cEEEEeCCCCceeee
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK--LIKLWDWEKNWECTQ 138 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~--~v~iwd~~~~~~~~~ 138 (312)
....+++.++++++++...++.|+.||.+++......... .... +++++++..++.+..++ .|.+++...... ..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE
Confidence 3457788888887777777899999999876654444332 2334 89999999888888766 688888654332 11
Q ss_pred Ee---cC-CccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceee----ecccccce-e-EEEEEEcC-CceEEEEE
Q 047355 139 TF---EG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT----LDAHEKGI-N-CIDYFITS-DKVYLITG 207 (312)
Q Consensus 139 ~~---~~-~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~----~~~~~~~v-~-~~~~~~~~-~~~~l~sg 207 (312)
.+ .. .......++++|.++. ++.+..++.|+.||..+...... ..++.... . .+. +++ ++.++++.
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia--~~p~~g~lyv~d 285 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLI--YYFVDSNFYMSD 285 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEE--EETTTTEEEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEE--EeCCCCEEEEEe
Confidence 22 11 3344566788885544 44466788999999987653322 11211111 1 454 456 57788888
Q ss_pred eCCCeEEEEeCCCCeEEEEecccc---------------cCeEEEEEeCCCcEEEEEe-CCCcEEEEeCCCcceeeeccc
Q 047355 208 SDDFTVKVWDYETKTCVQILEGHT---------------NNVTAVCFHPELRIIITAS-EDGTILIWNATTFRLQNTLSS 271 (312)
Q Consensus 208 ~~dg~i~vwd~~~~~~~~~~~~h~---------------~~i~~l~~~~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~ 271 (312)
..++.|+.|+.... ...+.++. .....++++|++.++++-. .++.|+.|+..++++......
T Consensus 286 ~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 88899999997643 23333332 3478999999999888887 889999999777664322211
Q ss_pred --------------CccceEEEEEecCCCeEEEEecCCeEEE
Q 047355 272 --------------GLERVWSIGYKKGSNQVAFGCDNGTLIV 299 (312)
Q Consensus 272 --------------~~~~v~~~~~~~~~~~l~~~~~~g~i~v 299 (312)
....+..++++++++++++-..+++|+.
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 1356899999999998888888888774
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=1.8e-10 Score=95.59 Aligned_cols=233 Identities=10% Similarity=-0.046 Sum_probs=158.1
Q ss_pred CceeEEEEeeCCcEEEEecCCCeEEEEEccCceeee-eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeee
Q 047355 60 SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVK-EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138 (312)
Q Consensus 60 ~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~ 138 (312)
.....+.+.+++...++...++.|..||.. ++... .+..+...+.++++.+++.+.++...++.|..+|.. ......
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~ 97 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEY 97 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEe
Confidence 356678888888877777778999999987 43322 223334568899999999887777767889999976 322212
Q ss_pred EecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcce-eeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEe
Q 047355 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK-FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWD 217 (312)
Q Consensus 139 ~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd 217 (312)
........+..+.+.+. +.++++...++.|..||.. ++.. ..+......+..+. ..+++.+.++...++.|..||
T Consensus 98 ~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~--~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFIT--LGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp ECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEE--ECTTSSEEEEETTTTEEEEEC
T ss_pred cCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEE--ECCCCCEEEEecCCCeEEEEC
Confidence 22223356777888874 4667766668899999987 4333 22222233445544 567788777776688999999
Q ss_pred CCCCeEEEE-ecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceee-ecccCccceEEEEEecCCCeEEEEecCC
Q 047355 218 YETKTCVQI-LEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN-TLSSGLERVWSIGYKKGSNQVAFGCDNG 295 (312)
Q Consensus 218 ~~~~~~~~~-~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~g 295 (312)
. +++.... ...+...+..+++++++.++++....+.|.+|+. +++... .+......+.++++.++|+..++...++
T Consensus 174 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 251 (300)
T 2qc5_A 174 N-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGAN 251 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred C-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCC
Confidence 8 5554432 2234456899999999987777777788999998 444333 2334456789999999999777665666
Q ss_pred eEEEE
Q 047355 296 TLIVK 300 (312)
Q Consensus 296 ~i~v~ 300 (312)
.|...
T Consensus 252 ~i~~~ 256 (300)
T 2qc5_A 252 QIGRI 256 (300)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66544
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=4.1e-11 Score=99.93 Aligned_cols=225 Identities=11% Similarity=0.162 Sum_probs=147.8
Q ss_pred cEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 19 RVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 19 ~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
---...|+|++. .+++...++.|..||..+.+. ..+. ....+..+.+.++++++++ . ++.|.+||.++++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 345788999655 555666789999999887654 3333 3457888999999995554 4 567999998876543222
Q ss_pred cc----cccceeEEEEecCCCEEEEEeCC---------CcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe
Q 047355 98 EA----HEDYIRSLAVHPTFPFVLTASDD---------KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS 164 (312)
Q Consensus 98 ~~----h~~~i~~~~~~~~~~~l~t~s~d---------~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 164 (312)
.. ....++.+++.|++++.++.... ..-.+|.+....... ....+......++|+|.+..++++.+
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecC
Confidence 11 12357889999999977654321 234555544322221 12222334567889986544556777
Q ss_pred CCCeEEEEEcC--CCcce-----eeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEE
Q 047355 165 LDGTIQIWNMD--SSAAK-----FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237 (312)
Q Consensus 165 ~dg~v~iwd~~--~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l 237 (312)
.++.|.+||++ ++... ..+..+......+. .+++|.+.++....+.|..||..+++.+..+..+...++++
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~--~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~ 246 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMC--IDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSC 246 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEE--EBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEE
T ss_pred CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeE--ECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEE
Confidence 78999999974 33221 11222223344443 57788888887788899999999899888888777789999
Q ss_pred EEe-CCCcEEEEEe
Q 047355 238 CFH-PELRIIITAS 250 (312)
Q Consensus 238 ~~~-~~~~~l~s~s 250 (312)
+|. |+++.|+.++
T Consensus 247 ~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 247 CFGGKNYSEMYVTC 260 (297)
T ss_dssp EEESGGGCEEEEEE
T ss_pred EEeCCCCCEEEEEc
Confidence 998 8877665444
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=2.2e-10 Score=95.49 Aligned_cols=225 Identities=14% Similarity=0.173 Sum_probs=147.1
Q ss_pred eeEEEEeeCC-cEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee-eeE
Q 047355 62 VRTAKFVARE-HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC-TQT 139 (312)
Q Consensus 62 v~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~-~~~ 139 (312)
-....|.+++ ..+++...++.|..||.++... ..+ .....+.+++++++++++++ . ++.|.+||..+.... ...
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 4466788854 4556666789999999987654 223 23467899999999996554 3 567999998654221 111
Q ss_pred ec--CCccceEEEEeCCCCCCEEEEEeCC---------CeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEE-EEE
Q 047355 140 FE--GHSHYVMQSAFNPKDLNTFASASLD---------GTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYL-ITG 207 (312)
Q Consensus 140 ~~--~~~~~v~~~~~~~~~~~~~~s~s~d---------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~sg 207 (312)
.. .....+..+.++|. +.++++...+ ..-.+|.+........+..+....+.+. +++++..+ ++.
T Consensus 91 ~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~--~spdg~~lyv~~ 167 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLD--WSLDHKIFYYID 167 (297)
T ss_dssp CCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEE--ECTTSCEEEEEE
T ss_pred cCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceE--EcCCCCEEEEec
Confidence 11 11244677888885 4555544221 2334555543322222222223344454 47787644 666
Q ss_pred eCCCeEEEEeC--CCCeE-----EEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEE
Q 047355 208 SDDFTVKVWDY--ETKTC-----VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIG 280 (312)
Q Consensus 208 ~~dg~i~vwd~--~~~~~-----~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 280 (312)
+.++.|.+|+. .++.. ...+..+......+++++++.+.++...++.|..||..++++...+..+...+.+++
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEE
Confidence 77889999986 45543 222333445688999999999888888888999999988898888877778899999
Q ss_pred Ee-cCCCeEEEEec
Q 047355 281 YK-KGSNQVAFGCD 293 (312)
Q Consensus 281 ~~-~~~~~l~~~~~ 293 (312)
|+ |+++.|..++.
T Consensus 248 f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 248 FGGKNYSEMYVTCA 261 (297)
T ss_dssp EESGGGCEEEEEEB
T ss_pred EeCCCCCEEEEEcC
Confidence 98 89887765554
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=2.1e-12 Score=110.77 Aligned_cols=173 Identities=12% Similarity=0.060 Sum_probs=130.0
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCce---------eee-eecccccceeEEEEecCCCEEEEEeCCCcEEEEeC
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA---------SVK-EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW 130 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------~~~-~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~ 130 (312)
++..++.++...++++|+.++ +++|+++... ... ....+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 688899999999999999985 5569876443 111 1223556 999999 88888888 8899999998
Q ss_pred CCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCC
Q 047355 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD 210 (312)
Q Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d 210 (312)
..... ......+...+..+.+.++ .+++++.||.|.+||+.+..... +...+.|++| +++| ++.|..|
T Consensus 114 ~sl~~-~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~W--SpkG--~~vg~~d 181 (388)
T 1xip_A 114 EELSE-FRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDV--TNSQ--LAVLLKD 181 (388)
T ss_dssp SSTTC-EEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEE--CSSE--EEEEETT
T ss_pred hhhhc-cCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEE--cCCc--eEEEEcC
Confidence 76532 2334455566777776653 38889999999999998776542 4467888875 6777 6789999
Q ss_pred CeEEEEeCCCCeE--EEEe------c---ccccCeEEEEEeCCCcEEEEEe
Q 047355 211 FTVKVWDYETKTC--VQIL------E---GHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 211 g~i~vwd~~~~~~--~~~~------~---~h~~~i~~l~~~~~~~~l~s~s 250 (312)
|++++|+....+. ...+ . +|...|.+|.|.+++.++++-.
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999999887775 4455 2 3677899999999999887643
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=3.4e-10 Score=95.68 Aligned_cols=222 Identities=10% Similarity=0.036 Sum_probs=141.1
Q ss_pred cEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 19 RVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 19 ~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
-....+|+|++. .+++...++.|..||.++++. ..+. ....+..+.+.++++++++. .+ .|.+||.++++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 356789999855 455666789999999876643 2333 24568888999998876654 44 4899998776543222
Q ss_pred cc----cccceeEEEEecCCCEEEEEeC------CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCC
Q 047355 98 EA----HEDYIRSLAVHPTFPFVLTASD------DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 98 ~~----h~~~i~~~~~~~~~~~l~t~s~------d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg 167 (312)
.. ....+.+++++|++++.++... .+.|..++ . . .. ..+..+......+.|+|.+..++++.+.++
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~-g-~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K-G-KV-TKLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T-T-EE-EEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C-C-cE-EEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 11 1235889999999987765432 23455555 2 2 22 222222234567888885433445556678
Q ss_pred eEEEEEcC--CC-cc-----eeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEE
Q 047355 168 TIQIWNMD--SS-AA-----KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239 (312)
Q Consensus 168 ~v~iwd~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~ 239 (312)
.|.+||++ ++ .. ...+.........+ ..+++|.+.++...++.|..||. +++.+..+..+...+++++|
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi--~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGS--VCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEE--EECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCee--EECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 99999986 43 21 11111122223333 35778877777667789999998 56677777766777999999
Q ss_pred e-CCCcEEEEEeC
Q 047355 240 H-PELRIIITASE 251 (312)
Q Consensus 240 ~-~~~~~l~s~s~ 251 (312)
. |+++.|+.++.
T Consensus 279 ~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 279 IGPDASRLLVTSA 291 (326)
T ss_dssp ESTTSCEEEEEEB
T ss_pred ecCCCCEEEEEec
Confidence 8 88776654443
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=5.1e-11 Score=103.58 Aligned_cols=239 Identities=10% Similarity=0.094 Sum_probs=156.0
Q ss_pred EEEEcCCCCeEEEEe----------cCCeEEEEeccCCceeeeEEec-------CCceeEEEEeeCCcEEEEecC--CCe
Q 047355 22 SVDFHPTQPWVLASL----------YSGTVCIWNYHSQTTEKSVKVT-------DSPVRTAKFVAREHWIVCGSD--DKF 82 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~----------~dg~v~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~--dg~ 82 (312)
.++++||+++|+++. .++.|.++|..+.+....+... ...-..+.|++++++++.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999998876 4678999999998888777653 112346789999999998864 578
Q ss_pred EEEEEccCceeeeeecccccceeEEEEecCC-CEEEEEeCCCcEEEEeCCCCceeee----EecCCccc-eEEEEeCCCC
Q 047355 83 IRVFDYNTMASVKEFEAHEDYIRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQ----TFEGHSHY-VMQSAFNPKD 156 (312)
Q Consensus 83 i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~t~s~d~~v~iwd~~~~~~~~~----~~~~~~~~-v~~~~~~~~~ 156 (312)
|.+.|+.+.+.+..+..... ....|.+ ..+++.+.||.+.+.+.... .... .+.....+ .....+.+..
T Consensus 202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~-~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADG-ETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTT-CCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCC-cEEEEeeeeeccCCCceeeEeeecCCC
Confidence 99999999988777654221 2223332 44455666777776666322 2111 11111111 1123455543
Q ss_pred CCEEEEEeCCCeEEEEEcCCCccee----eec-c-------cccceeEEEEEEcCCceEEEEEe----------CCCeEE
Q 047355 157 LNTFASASLDGTIQIWNMDSSAAKF----TLD-A-------HEKGINCIDYFITSDKVYLITGS----------DDFTVK 214 (312)
Q Consensus 157 ~~~~~s~s~dg~v~iwd~~~~~~~~----~~~-~-------~~~~v~~~~~~~~~~~~~l~sg~----------~dg~i~ 214 (312)
..++..+..+.|.+.|+....... .+. . ...+...+. +++++..+.... .++.|.
T Consensus 277 -~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va--~s~dg~rlyVa~~~~~~gthk~~s~~Vs 353 (426)
T 3c75_H 277 -GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTA--YHRQSDRIYLLVDQRDEWKHKAASRFVV 353 (426)
T ss_dssp -CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEE--EEGGGTEEEEEEEECCTTCTTSCEEEEE
T ss_pred -CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeE--EcCCCCEEEEEecccccccccCCCCEEE
Confidence 455555678899999986543211 000 0 001111233 345554444432 135799
Q ss_pred EEeCCCCeEEEEecccccCeEEEEEeCCCc-EEEEEe-CCCcEEEEeCCCcceeeec
Q 047355 215 VWDYETKTCVQILEGHTNNVTAVCFHPELR-IIITAS-EDGTILIWNATTFRLQNTL 269 (312)
Q Consensus 215 vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~s-~dg~v~iwd~~~~~~~~~~ 269 (312)
++|..+.+.+..+.. .....+++|+|+++ ++++.. .++.|.++|..+++.+.++
T Consensus 354 VID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 354 VLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999999999988864 23578999999998 888877 5899999999999998876
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=3.1e-11 Score=103.16 Aligned_cols=244 Identities=10% Similarity=-0.030 Sum_probs=155.0
Q ss_pred CCCeEEEEec-CC----eEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec----------CCCeEEEEEccCce
Q 047355 28 TQPWVLASLY-SG----TVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS----------DDKFIRVFDYNTMA 92 (312)
Q Consensus 28 ~~~~l~~~~~-dg----~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----------~dg~i~iwd~~~~~ 92 (312)
...+++.... ++ +|.+.|.++.+.+..+.....+ .+.+++++++++.+. .++.|.+||..+.+
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 3345555543 33 8889999999999988877777 799999999998886 36899999999999
Q ss_pred eeeeecccc-------cceeEEEEecCCCEEEEEeC--CCcEEE--EeCCCCceeeeEecC-C-----------------
Q 047355 93 SVKEFEAHE-------DYIRSLAVHPTFPFVLTASD--DKLIKL--WDWEKNWECTQTFEG-H----------------- 143 (312)
Q Consensus 93 ~~~~~~~h~-------~~i~~~~~~~~~~~l~t~s~--d~~v~i--wd~~~~~~~~~~~~~-~----------------- 143 (312)
...++..+. ..-..++++|++++++++.. +..+.+ +|..+ ...+.. .
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~~~~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKSASCFHIHPGAAATHYLGSC 183 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEECSSCCCCEEEETTEEECCCC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEECCCceEEccCCCeEEEEEcC
Confidence 888875431 23567899999999888764 456888 88744 111110 0
Q ss_pred ccceEEEEe--------------------------CCCCCCEEEEEeCCCeEEEEEcCCCcce--eeecc-------c--
Q 047355 144 SHYVMQSAF--------------------------NPKDLNTFASASLDGTIQIWNMDSSAAK--FTLDA-------H-- 186 (312)
Q Consensus 144 ~~~v~~~~~--------------------------~~~~~~~~~s~s~dg~v~iwd~~~~~~~--~~~~~-------~-- 186 (312)
...+..+.. .+. ...++..+. +.+.+.|+.+.... ..+.. +
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~-~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~ 261 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY-PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNF 261 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT-TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTE
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCcccccc-CCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccc
Confidence 000000000 111 122233333 56666666432211 11100 0
Q ss_pred -ccceeEEEEEEcCCceEEEEEeC---------CCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCc-EEEEEe-CCCc
Q 047355 187 -EKGINCIDYFITSDKVYLITGSD---------DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELR-IIITAS-EDGT 254 (312)
Q Consensus 187 -~~~v~~~~~~~~~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~-~l~s~s-~dg~ 254 (312)
..+...+. +++++..+..+.. ++.+.++|+.+.+.+..+.... ....++|+||++ ++++.. .++.
T Consensus 262 ~p~g~~~v~--~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 262 RSAGFQMVA--KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp EECSSSCEE--EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTE
T ss_pred ccCcceeeE--EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCe
Confidence 01111133 4566655554322 2356699999999888876544 578999999997 566666 5999
Q ss_pred EEEEeCCCcceeeecccCccceEEEEEec
Q 047355 255 ILIWNATTFRLQNTLSSGLERVWSIGYKK 283 (312)
Q Consensus 255 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 283 (312)
|.++|+.+++.+.++... ...+.+++.+
T Consensus 339 VsVID~~t~kvv~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 339 LDIYDAASDQDQSSVELD-KGPESLSVQN 366 (368)
T ss_dssp EEEEESSSCEEEEECCCC-SCCCEEECCC
T ss_pred EEEEECCCCcEEEEEECC-CCCCEEEeec
Confidence 999999999998887643 4556666654
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.42 E-value=3.4e-10 Score=94.69 Aligned_cols=233 Identities=6% Similarity=0.022 Sum_probs=149.1
Q ss_pred cCCceeEEEEeeCCc-EEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee
Q 047355 58 TDSPVRTAKFVAREH-WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC 136 (312)
Q Consensus 58 ~~~~v~~~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~ 136 (312)
.........|.++++ .++++..++.|..|+.. ++ ...+..+...+..++++++++++++...++.|..||.......
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~ 120 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHL 120 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEE
Confidence 334456788999988 56777788999999874 33 3455556677899999999997766666678999987532111
Q ss_pred ee-EecCC-ccceEEEEeCCCCCCEEEE----EeC-------------CCeEEEEEcCCCcceeeecccccceeEEEEEE
Q 047355 137 TQ-TFEGH-SHYVMQSAFNPKDLNTFAS----ASL-------------DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFI 197 (312)
Q Consensus 137 ~~-~~~~~-~~~v~~~~~~~~~~~~~~s----~s~-------------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 197 (312)
.. ...+. ...+..+.+.|. +.+.++ +.. .+.|..||..+++..... .....+.++ +
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~--~ 195 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLA--F 195 (305)
T ss_dssp EECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEE--E
T ss_pred EEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceE--E
Confidence 11 11111 123445777774 466665 332 246777777655443322 223344454 5
Q ss_pred cCCceEEEEEeCC------CeEEEEeCCCCeEE--EEe-cccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee
Q 047355 198 TSDKVYLITGSDD------FTVKVWDYETKTCV--QIL-EGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268 (312)
Q Consensus 198 ~~~~~~l~sg~~d------g~i~vwd~~~~~~~--~~~-~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 268 (312)
++++..|..+... +.|.+|++...... ..+ .........+++++++++.++ ..+ .|.+|+. .++....
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGH 272 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEE
Confidence 7888766665544 78999998654311 111 112334567899999985444 444 4999997 4566555
Q ss_pred cccCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 269 LSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 269 ~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
+.... .+..++|+++++.|..++.++..++..
T Consensus 273 ~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~~ 304 (305)
T 3dr2_A 273 IPTPG-TASNCTFDQAQQRLFITGGPCLWMLPL 304 (305)
T ss_dssp EECSS-CCCEEEECTTSCEEEEEETTEEEEEEC
T ss_pred EECCC-ceeEEEEeCCCCEEEEEcCCeEEEEEC
Confidence 55443 588999999999999888887777653
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=1.3e-11 Score=105.15 Aligned_cols=259 Identities=10% Similarity=0.037 Sum_probs=158.6
Q ss_pred CcEEEEEEcCCCCeEEEEe--cCCeEEEEeccCCceeeeEE-------ecCCceeEEEEeeCCcEEEEecC-----CCeE
Q 047355 18 DRVKSVDFHPTQPWVLASL--YSGTVCIWNYHSQTTEKSVK-------VTDSPVRTAKFVAREHWIVCGSD-----DKFI 83 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~g~~-----dg~i 83 (312)
.....++++|+|+.+++.. .++.++||.++.++ ...+. .+...+..+++.+++++.++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5789999999998877753 23436666665332 22111 12246788899998775554433 5789
Q ss_pred EEEEccCceeeeeecc------cccceeEEEEecCCCEE-EEEe---CCCcEEEEeCCCCceeeeEecCCccceE-EEEe
Q 047355 84 RVFDYNTMASVKEFEA------HEDYIRSLAVHPTFPFV-LTAS---DDKLIKLWDWEKNWECTQTFEGHSHYVM-QSAF 152 (312)
Q Consensus 84 ~iwd~~~~~~~~~~~~------h~~~i~~~~~~~~~~~l-~t~s---~d~~v~iwd~~~~~~~~~~~~~~~~~v~-~~~~ 152 (312)
.+||+++++..+.+.. +...+..+++++++..+ ++-. .++.|.+||.... .....+.+|..... ...+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g-~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG-LAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC-CEEEECTTCTTTSCCSCCC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC-CEEEEecCCCcccccccce
Confidence 9999998876665542 22356899999865454 4544 5789999998654 23333333221100 0111
Q ss_pred CCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCC-eEEEEeCC---CCe-----E
Q 047355 153 NPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDF-TVKVWDYE---TKT-----C 223 (312)
Q Consensus 153 ~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg-~i~vwd~~---~~~-----~ 223 (312)
.+ ++..+.+.+.+++++.|.. .++.++ +++++..|..+..++ .|..++.. .+. .
T Consensus 175 ~~-~g~~~~~~~~~g~~~~~~~--------------~~~gia--~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 175 VI-DGVPVQIGQPDGTVIRPHL--------------GVNGIV--LDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp EE-TTEECBEECTTSCEECCCC--------------CEEEEE--ECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHH
T ss_pred eE-CCEEEEeccCCCceeceec--------------ccceeE--eccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhh
Confidence 11 2234555566666655431 234444 578887777766555 55555531 110 0
Q ss_pred EE--EecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeeccc-CccceEEEEEecCCCeEEEEecCC
Q 047355 224 VQ--ILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS-GLERVWSIGYKKGSNQVAFGCDNG 295 (312)
Q Consensus 224 ~~--~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~g 295 (312)
.. ...++......+++++++.++++...++.|.+||..++++...... ....+.+++|.++++++++.+..+
T Consensus 238 ~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 238 GSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp HTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred hcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 00 1113344567899999999999999999999999855554333222 245689999999998888877544
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.40 E-value=3e-09 Score=89.84 Aligned_cols=220 Identities=10% Similarity=-0.028 Sum_probs=140.7
Q ss_pred eEEEEeeCC-cEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeee-Ee
Q 047355 63 RTAKFVARE-HWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ-TF 140 (312)
Q Consensus 63 ~~~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~-~~ 140 (312)
....|.+++ ..+++...++.|..||.++++.. .+. ....+.++++.++++++++. .+ .+.+||..+...... ..
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC
Confidence 456788864 45566667899999998876532 232 24578999999999877654 33 488999765422111 11
Q ss_pred c--CCccceEEEEeCCCCCCEEEEEeC------CCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEE-EEEeCCC
Q 047355 141 E--GHSHYVMQSAFNPKDLNTFASASL------DGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYL-ITGSDDF 211 (312)
Q Consensus 141 ~--~~~~~v~~~~~~~~~~~~~~s~s~------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~sg~~dg 211 (312)
. .....+..+.++|.+ .++++... .+.|..++ +++. ..+..+....+.+. +++++..+ ++.+.++
T Consensus 128 ~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~--~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSIC--FSPDGTTGYFVDTKVN 201 (326)
T ss_dssp STTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEE--ECTTSCEEEEEETTTC
T ss_pred CCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeE--EcCCCCEEEEEECCCC
Confidence 1 112357788888854 55554432 24555555 3322 22222222334444 57788654 5556678
Q ss_pred eEEEEeCC--CC-e-----EEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEe-
Q 047355 212 TVKVWDYE--TK-T-----CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK- 282 (312)
Q Consensus 212 ~i~vwd~~--~~-~-----~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~- 282 (312)
.|.+||.. ++ + ....+.........+++++++.+.++...++.|.+||. +++....+..+...+.+++|+
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence 99999975 45 2 22233333455789999999988877777789999997 566666666666679999998
Q ss_pred cCCCeEEEEec
Q 047355 283 KGSNQVAFGCD 293 (312)
Q Consensus 283 ~~~~~l~~~~~ 293 (312)
++++.|..++.
T Consensus 281 ~d~~~L~vt~~ 291 (326)
T 2ghs_A 281 PDASRLLVTSA 291 (326)
T ss_dssp TTSCEEEEEEB
T ss_pred CCCCEEEEEec
Confidence 88887755544
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=1.6e-10 Score=107.63 Aligned_cols=233 Identities=13% Similarity=0.093 Sum_probs=147.3
Q ss_pred ceeEEEEeeCCcEEEE-----ecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCc-----------
Q 047355 61 PVRTAKFVAREHWIVC-----GSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKL----------- 124 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~-----g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~----------- 124 (312)
.+....|+||+++|+- |++...|++||+.+++..... .+......++|+ +++.|+.++.+..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 5777899999998883 444468999999998754331 111123578999 9999988887743
Q ss_pred --EEEEeCCCCcee-eeEec--C-CccceEEEEeCCCCCCEEEEEeC---CCeEEEEEcCCCc-ceeeecccccceeEEE
Q 047355 125 --IKLWDWEKNWEC-TQTFE--G-HSHYVMQSAFNPKDLNTFASASL---DGTIQIWNMDSSA-AKFTLDAHEKGINCID 194 (312)
Q Consensus 125 --v~iwd~~~~~~~-~~~~~--~-~~~~v~~~~~~~~~~~~~~s~s~---dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~ 194 (312)
|++|++.+.... ...+. . +...+..+.++|.+..++++.+. +..|+++|+.+.. ....+..+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~- 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL- 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-
Confidence 899998754321 22232 2 34456788899865444455443 3589999997753 334455554444332
Q ss_pred EEEcCCceEEEEEeC---CCeEEEEeCCCCeE--EEEecccccCeEEEEEeCCCcEEEEEeC-CC--cEEEEeCCCccee
Q 047355 195 YFITSDKVYLITGSD---DFTVKVWDYETKTC--VQILEGHTNNVTAVCFHPELRIIITASE-DG--TILIWNATTFRLQ 266 (312)
Q Consensus 195 ~~~~~~~~~l~sg~~---dg~i~vwd~~~~~~--~~~~~~h~~~i~~l~~~~~~~~l~s~s~-dg--~v~iwd~~~~~~~ 266 (312)
+.. .++.+++.... .+.|..+|+.++.. ...+..|...+. .|+++++.|+.... ++ .|++|++.....
T Consensus 287 ~~~-~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~- 362 (693)
T 3iuj_A 287 VDN-KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV- 362 (693)
T ss_dssp EEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-
T ss_pred Eec-cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-
Confidence 222 23444555444 36899999987643 234455666555 88998887766654 44 689999875433
Q ss_pred eeccc-CccceEEEEEecCCCeEEEEecC----CeEEEE
Q 047355 267 NTLSS-GLERVWSIGYKKGSNQVAFGCDN----GTLIVK 300 (312)
Q Consensus 267 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~----g~i~v~ 300 (312)
..+.. ....+..+.++++++.|.....+ ++++..
T Consensus 363 ~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~ 401 (693)
T 3iuj_A 363 REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRF 401 (693)
T ss_dssp EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEE
T ss_pred EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEE
Confidence 33332 33457778888899888876654 555544
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=3.6e-13 Score=116.04 Aligned_cols=188 Identities=11% Similarity=0.062 Sum_probs=107.9
Q ss_pred CCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEE
Q 047355 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149 (312)
Q Consensus 70 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~ 149 (312)
++..+++++.||.|+.||..+++..-.++. +.+.+..+..++..+++++.|+.++.||..+... ...+..+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~~~~- 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG-LTKLPFTIPELV- 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC-SEECSCCHHHHH-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce-eeeeeccCcccc-
Confidence 467899999999999999999987766665 4565555566777788888999999999865422 222222211100
Q ss_pred EEeCCC--CCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEe
Q 047355 150 SAFNPK--DLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227 (312)
Q Consensus 150 ~~~~~~--~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 227 (312)
...|. ....+++++.|+.++.||.++++.+..+..+.. .. .++++..+++++.|+.|+.||.++++.+..+
T Consensus 84 -~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~--~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 84 -QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DS--LSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp -TTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred -ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----cc--ccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 01111 235678888999999999999888776655431 11 2336677888899999999999988765444
Q ss_pred cccccCeEEEEEeCCC---cEEEEEeCCCcEEEEeCCCcceeeecc
Q 047355 228 EGHTNNVTAVCFHPEL---RIIITASEDGTILIWNATTFRLQNTLS 270 (312)
Q Consensus 228 ~~h~~~i~~l~~~~~~---~~l~s~s~dg~v~iwd~~~~~~~~~~~ 270 (312)
..+. ....++.++. ..++.++.||.|+.||..+++.+.+..
T Consensus 157 ~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 157 TYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred eccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 3221 1223333332 457788999999999999988776654
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.31 E-value=2.6e-09 Score=89.33 Aligned_cols=225 Identities=11% Similarity=0.045 Sum_probs=142.1
Q ss_pred CcEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 18 DRVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 18 ~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
.-.....|+|+++ .+++...++.|..|+.. ++ ...+......+..+.+.++++++++...++.|..|+.+ ++. ..
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-HL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-EE
Confidence 4567889999998 55667778999999874 33 34555566678889999999877666666889999876 332 22
Q ss_pred eccc-----ccceeEEEEecCCCEEEE----EeC-------------CCcEEEEeCCCCceeeeEecCCccceEEEEeCC
Q 047355 97 FEAH-----EDYIRSLAVHPTFPFVLT----ASD-------------DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP 154 (312)
Q Consensus 97 ~~~h-----~~~i~~~~~~~~~~~l~t----~s~-------------d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 154 (312)
+..+ ...+.++++.|++.+.++ |.. .+.|..+|...... ..+. .......++|+|
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~~~~-~~~~p~gl~~sp 197 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--QRMA-DLDHPNGLAFSP 197 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--EEEE-EESSEEEEEECT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--EEEe-cCCCCcceEEcC
Confidence 2111 124678999999998876 332 24566666543321 1112 233456788998
Q ss_pred CCCCEEEEEeCC------CeEEEEEcCCCcce--eee-cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE
Q 047355 155 KDLNTFASASLD------GTIQIWNMDSSAAK--FTL-DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ 225 (312)
Q Consensus 155 ~~~~~~~s~s~d------g~v~iwd~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 225 (312)
.+ ..++.+... +.|..|++...... ..+ .........+. .+++|.+.++ ..+ .|.+|+. .++.+.
T Consensus 198 dg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~--~d~~G~lwv~-~~~-gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 198 DE-QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC--VDRGGWLWSS-SGT-GVCVFDS-DGQLLG 271 (305)
T ss_dssp TS-SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE--ECTTSCEEEC-CSS-EEEEECT-TSCEEE
T ss_pred CC-CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE--ECCCCCEEEe-cCC-cEEEECC-CCCEEE
Confidence 54 555555443 78999998754310 111 11111122233 4677775444 444 4999998 466666
Q ss_pred EecccccCeEEEEEeCCCcEEEEEeCCCcEE
Q 047355 226 ILEGHTNNVTAVCFHPELRIIITASEDGTIL 256 (312)
Q Consensus 226 ~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~ 256 (312)
.+..+. .+.+++|.|+++.|..++.++..+
T Consensus 272 ~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 272 HIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 666544 588999999988888877764433
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.31 E-value=8.3e-09 Score=88.76 Aligned_cols=258 Identities=10% Similarity=0.010 Sum_probs=157.5
Q ss_pred CCCeEEEEecCCeEEEEeccCCceeeeEEecC---------CceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec
Q 047355 28 TQPWVLASLYSGTVCIWNYHSQTTEKSVKVTD---------SPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 28 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 98 (312)
++..+++++.++.|..+|..+++..-.+.... ..+. .....++..++.++.++.|..+|.++++..-.+.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLS-GGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEE-EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccc-cCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 35678888889999999998887765554421 1222 2233346678889999999999999887665554
Q ss_pred ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccce-----EEEEeCCCCCCEEEEEeCCCeEEEEE
Q 047355 99 AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYV-----MQSAFNPKDLNTFASASLDGTIQIWN 173 (312)
Q Consensus 99 ~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~~s~s~dg~v~iwd 173 (312)
..........+. +..++.++.++.+..+|..+... ...+....... ..... ....++.++.++.+..+|
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~~~~~~~~~~~~---~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPSLSLRGESAPTT---AFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCE-EEEEECCC-----CCCCCCEE---ETTEEEECCTTTEEEEEE
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCceeecCCCCcEE---ECCEEEEEcCCCEEEEEE
Confidence 332222222222 34677788899999999876533 22222211110 00011 125678888899999999
Q ss_pred cCCCcceeeecccccc----------eeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCC
Q 047355 174 MDSSAAKFTLDAHEKG----------INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPEL 243 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~ 243 (312)
..+++........... +...- .. .+..+..++.++.+..+|.++++.+..... .....+.. ++
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p-~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~ 277 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTP-VV--VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DG 277 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCC-EE--ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ET
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCc-EE--ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--EC
Confidence 9988876655422110 00000 01 123466677899999999999987755442 23444444 35
Q ss_pred cEEEEEeCCCcEEEEeCCCcceeeecccCc-cceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 244 RIIITASEDGTILIWNATTFRLQNTLSSGL-ERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
..+..++.++.|..+|..+++......... ........ .+..|..++.+|.+.+.-
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEE
Confidence 668888889999999999988766554211 11111221 245666777777666443
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.31 E-value=3.1e-12 Score=110.19 Aligned_cols=221 Identities=11% Similarity=0.061 Sum_probs=124.1
Q ss_pred CCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeeccccc-ceeE
Q 047355 28 TQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHED-YIRS 106 (312)
Q Consensus 28 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-~i~~ 106 (312)
++..+++++.||.|+.||..+++..-.+.. .++.+..+..++..+++++.||.|+.||.++++....++.+.. .+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999888776665 4455555566777788889999999999988776555543321 1111
Q ss_pred -EEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecc
Q 047355 107 -LAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDA 185 (312)
Q Consensus 107 -~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~ 185 (312)
..+. .+..+++++.|+.+..||..++. ....+..+.. ..+.| ....+++++.|+.|+.||.++++.+..+..
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~-~~w~~~~~~~----~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGE-KQQTLSSAFA----DSLSP-STSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCc-EEEEecCCCc----ccccc-cCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1111 34457778889999999987653 2333333321 23445 457888899999999999998887665543
Q ss_pred cccceeEEEEEEcCCc---eEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEE-EEEeCCCcEE----EEEeCCCcEEE
Q 047355 186 HEKGINCIDYFITSDK---VYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTA-VCFHPELRII----ITASEDGTILI 257 (312)
Q Consensus 186 ~~~~v~~~~~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~-l~~~~~~~~l----~s~s~dg~v~i 257 (312)
+.. .... ...+. ..++.++.||.|..||.++++.+..+. ..+++.. ..+++++... +.+ ++.++.
T Consensus 159 ~~~--~~~~--~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ 231 (369)
T 2hz6_A 159 FDY--AASL--PEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGLRKVMHINVA--VETLRY 231 (369)
T ss_dssp EEE--CCBC--CCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSCEEECCEEEE--HHHHHH
T ss_pred ccc--cCcc--ccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCceEeccceeec--ccceee
Confidence 211 1111 12211 346678899999999999998876665 3444433 3445555422 112 344566
Q ss_pred EeCCCcc
Q 047355 258 WNATTFR 264 (312)
Q Consensus 258 wd~~~~~ 264 (312)
+|..+++
T Consensus 232 ld~~tG~ 238 (369)
T 2hz6_A 232 LTFMSGE 238 (369)
T ss_dssp HHHHHHH
T ss_pred eehhcCC
Confidence 6665555
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=1e-08 Score=88.12 Aligned_cols=259 Identities=8% Similarity=0.020 Sum_probs=158.4
Q ss_pred CCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccce---
Q 047355 28 TQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYI--- 104 (312)
Q Consensus 28 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i--- 104 (312)
++..+++++.++.|..+|..+++..-.............. .+..++.++.++.|..+|..+++..-.+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 4567888889999999999888776555443322111122 24578888899999999998887665554322111
Q ss_pred --eEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc-------ceEEEEeCCC-CCCEEEEEeCCCeEEEEEc
Q 047355 105 --RSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH-------YVMQSAFNPK-DLNTFASASLDGTIQIWNM 174 (312)
Q Consensus 105 --~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~-------~v~~~~~~~~-~~~~~~s~s~dg~v~iwd~ 174 (312)
...... +..++.+..++.+..+|..+.... ........ .+......|. ....++.++.++.+..+|.
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~-w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMI-WQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTEEEEEETTTCCEE-EEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred CCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEE-EEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 122222 346777888999999998765332 22221100 0000001110 1356788888999999999
Q ss_pred CCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc-cccCeEEEEEeCCCcEEEEEeCCC
Q 047355 175 DSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG-HTNNVTAVCFHPELRIIITASEDG 253 (312)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~i~~l~~~~~~~~l~s~s~dg 253 (312)
++++........ ....+. .. +..+..++.++.|..+|..+++.+..... ....+...... +..|+.++.+|
T Consensus 257 ~tG~~~w~~~~~--~~~~~~--~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g 328 (376)
T 3q7m_A 257 RSGQIMWKRELG--SVNDFI--VD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEG 328 (376)
T ss_dssp TTCCEEEEECCC--CEEEEE--EE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTS
T ss_pred CCCcEEeeccCC--CCCCce--EE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCC
Confidence 988876655422 222222 22 34566777899999999999987765542 22223333332 45688899999
Q ss_pred cEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 254 TILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 254 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
.|.++|..+++.+.........+.+.-. ..+..|..++.+|.++..
T Consensus 329 ~l~~~d~~tG~~~~~~~~~~~~~~~~~~-~~~~~l~v~~~~G~l~~~ 374 (376)
T 3q7m_A 329 YLHWINVEDGRFVAQQKVDSSGFQTEPV-AADGKLLIQAKDGTVYSI 374 (376)
T ss_dssp EEEEEETTTCCEEEEEECCTTCBCSCCE-EETTEEEEEBTTSCEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCcceeCCE-EECCEEEEEeCCCEEEEE
Confidence 9999999999887665542222221111 135677888888887653
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=1.1e-09 Score=101.51 Aligned_cols=267 Identities=13% Similarity=0.079 Sum_probs=170.7
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEecCCc-----------eeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP-----------VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
+..|++++.++.|.-+|..+++.+-.+...... ...+.+ .+..|+.++.|+.|..+|..+++.+-.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 456777888899999999888776555433210 111222 4668889999999999999998877666
Q ss_pred ccc-c----cceeEEEEecCCCEEEEEeC------CCcEEEEeCCCCceeeeEecCCcc---------------------
Q 047355 98 EAH-E----DYIRSLAVHPTFPFVLTASD------DKLIKLWDWEKNWECTQTFEGHSH--------------------- 145 (312)
Q Consensus 98 ~~h-~----~~i~~~~~~~~~~~l~t~s~------d~~v~iwd~~~~~~~~~~~~~~~~--------------------- 145 (312)
..+ . ..+.+--.-.+ ..++.++. ++.|..+|..+.... ..+.....
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~-W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERK-WRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEE-EEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEE-EEeccCCCCcccccccccccccccccccc
Confidence 544 1 12221111113 34554443 689999998776433 22221100
Q ss_pred -----------ceEEEEeCCCCCCEEEEEeCCC-------------------eEEEEEcCCCcceeeecc--cc------
Q 047355 146 -----------YVMQSAFNPKDLNTFASASLDG-------------------TIQIWNMDSSAAKFTLDA--HE------ 187 (312)
Q Consensus 146 -----------~v~~~~~~~~~~~~~~s~s~dg-------------------~v~iwd~~~~~~~~~~~~--~~------ 187 (312)
......++|. .+.++.++.++ +|..+|.++++.+..++. |.
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~-~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAE-LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred CceeEeCCCcccccceeEcCC-CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 0113456664 46777776654 599999999988766543 21
Q ss_pred -cceeEEEEEEcCCc---eEEEEEeCCCeEEEEeCCCCeEEEEecccc-----------cCe------------------
Q 047355 188 -KGINCIDYFITSDK---VYLITGSDDFTVKVWDYETKTCVQILEGHT-----------NNV------------------ 234 (312)
Q Consensus 188 -~~v~~~~~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-----------~~i------------------ 234 (312)
......+. ..+| ..++.++.+|.|+++|.++++.+..+.... .++
T Consensus 312 ~~~p~l~~~--~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 312 TQPMILADI--KIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CSCCEEEEE--EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred CCCcEEEec--ccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 11122221 2255 678899999999999999999876553211 011
Q ss_pred ------EEEEEeCCCcEEEEEeC-------------------------------------------CCcEEEEeCCCcce
Q 047355 235 ------TAVCFHPELRIIITASE-------------------------------------------DGTILIWNATTFRL 265 (312)
Q Consensus 235 ------~~l~~~~~~~~l~s~s~-------------------------------------------dg~v~iwd~~~~~~ 265 (312)
..++|+|+..++++... .|.|..||+.+++.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 15789998888877543 27899999999988
Q ss_pred eeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 266 QNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
+.+.... ..++...+..++..+..++.+|.+++.-..
T Consensus 470 ~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 470 AWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 7766532 334555567788888888889998876543
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=3.6e-09 Score=98.09 Aligned_cols=257 Identities=10% Similarity=0.063 Sum_probs=163.7
Q ss_pred CCCeEEEEecCCeEEEEeccCCceeeeEEec-C----CceeEEEEeeCCcEEEEecC------CCeEEEEEccCceeeee
Q 047355 28 TQPWVLASLYSGTVCIWNYHSQTTEKSVKVT-D----SPVRTAKFVAREHWIVCGSD------DKFIRVFDYNTMASVKE 96 (312)
Q Consensus 28 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~ 96 (312)
++..|+.++.|+.|..+|..+++.+-.+... . ..+...-... +..++.++. ++.|+.+|..+++.+-.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 3567888899999999999988887666544 1 1121111122 345555543 79999999999886655
Q ss_pred eccccc--------------------------------ceeEEEEecCCCEEEEEeCCC-------------------cE
Q 047355 97 FEAHED--------------------------------YIRSLAVHPTFPFVLTASDDK-------------------LI 125 (312)
Q Consensus 97 ~~~h~~--------------------------------~i~~~~~~~~~~~l~t~s~d~-------------------~v 125 (312)
+..... ....++++|++..++.+..++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 432111 113578888888888777664 48
Q ss_pred EEEeCCCCceeeeEecC--Cc--------cceEEEEeCCCCC---CEEEEEeCCCeEEEEEcCCCcceeeecccccc---
Q 047355 126 KLWDWEKNWECTQTFEG--HS--------HYVMQSAFNPKDL---NTFASASLDGTIQIWNMDSSAAKFTLDAHEKG--- 189 (312)
Q Consensus 126 ~iwd~~~~~~~~~~~~~--~~--------~~v~~~~~~~~~~---~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~--- 189 (312)
..+|..+... ...+.. |. ..+. ..... ++ ..++.++.+|.++++|..+++.+..+......
T Consensus 286 ~AlD~~TG~~-~W~~~~~~~d~wd~~~~~~p~l-~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 286 VALDPDTGKY-KWHYQETPGDNWDYTSTQPMIL-ADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp EEECTTTCCE-EEEEESSTTCCSCCCCCSCCEE-EEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEECCCCCE-EEEEecCCCcccccccCCCcEE-Eeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 8888876633 333322 21 1111 11111 22 57888999999999999998876554321100
Q ss_pred --------e------------------------eEEEEEEcCCceEEEEEeC----------------------------
Q 047355 190 --------I------------------------NCIDYFITSDKVYLITGSD---------------------------- 209 (312)
Q Consensus 190 --------v------------------------~~~~~~~~~~~~~l~sg~~---------------------------- 209 (312)
+ ..++ .+++..++.+...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a--~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMS--FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCE--EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCce--EcCCCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 0 0112 2444444444322
Q ss_pred ---------------CCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCc-
Q 047355 210 ---------------DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGL- 273 (312)
Q Consensus 210 ---------------dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~- 273 (312)
.|.|..||+.+++.+-.+. +..++....+...+.+++.++.||.+++||..+++.+.++....
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 519 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG 519 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC
Confidence 2789999999999877665 44455566677778888999999999999999999988776443
Q ss_pred cceEEEEEecCCCeEEEE
Q 047355 274 ERVWSIGYKKGSNQVAFG 291 (312)
Q Consensus 274 ~~v~~~~~~~~~~~l~~~ 291 (312)
....-+.|.++|++++..
T Consensus 520 ~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 520 VVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CCSCCEEEEETTEEEEEE
T ss_pred cccCCEEEEeCCEEEEEE
Confidence 222334566888766543
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.26 E-value=3.2e-09 Score=98.65 Aligned_cols=266 Identities=13% Similarity=0.081 Sum_probs=167.3
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEecCCc----------e-eEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP----------V-RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
+..|++++.++.|.-+|..+++.+-.+...... + .... -.+..++.++.|+.|..+|.++++.+-.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVA--VWKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCE--EETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccE--EECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 567888888999999999888877665432210 1 1111 23567889999999999999998876554
Q ss_pred ccc--c---cceeEEEEecCCCEEEEEe------CCCcEEEEeCCCCceeeeEecC--C---------------------
Q 047355 98 EAH--E---DYIRSLAVHPTFPFVLTAS------DDKLIKLWDWEKNWECTQTFEG--H--------------------- 143 (312)
Q Consensus 98 ~~h--~---~~i~~~~~~~~~~~l~t~s------~d~~v~iwd~~~~~~~~~~~~~--~--------------------- 143 (312)
... . ..+.+--.-.++ .++.++ .++.+..||..+.... ..+.. .
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~-W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEA-WRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEE-EEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEE-EEecccCCCcccccccccccccccccCCc
Confidence 432 1 111111011133 344443 3688999998776432 22221 0
Q ss_pred --------ccceEEEEeCCCCCCEEEEEeCCCe-------------------EEEEEcCCCcceeeecc--cc-------
Q 047355 144 --------SHYVMQSAFNPKDLNTFASASLDGT-------------------IQIWNMDSSAAKFTLDA--HE------- 187 (312)
Q Consensus 144 --------~~~v~~~~~~~~~~~~~~s~s~dg~-------------------v~iwd~~~~~~~~~~~~--~~------- 187 (312)
........++|. .++++.++.++. |..+|.++++.+..++. |.
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp THHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCC
T ss_pred eeeecCCCCccccceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCC
Confidence 000113456664 467888877764 99999999988876643 22
Q ss_pred cceeEEEEEEcCCce---EEEEEeCCCeEEEEeCCCCeEEEEecccc-c-------------------------------
Q 047355 188 KGINCIDYFITSDKV---YLITGSDDFTVKVWDYETKTCVQILEGHT-N------------------------------- 232 (312)
Q Consensus 188 ~~v~~~~~~~~~~~~---~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~------------------------------- 232 (312)
......+.. .++. .++.++.+|.++++|.++++.+....... .
T Consensus 305 ~~~~l~d~~--~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 305 QHMILAELP--IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp SCEEEEEEE--ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCcEEEeec--cCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 111222222 2443 78899999999999999998874321100 0
Q ss_pred -------CeEEEEEeCCCcEEEEEeC---------------------------------------------CCcEEEEeC
Q 047355 233 -------NVTAVCFHPELRIIITASE---------------------------------------------DGTILIWNA 260 (312)
Q Consensus 233 -------~i~~l~~~~~~~~l~s~s~---------------------------------------------dg~v~iwd~ 260 (312)
.-..++|+|+..+++.... +|.|+.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 0113789998887776532 378999999
Q ss_pred CCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 261 TTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
.+++.+.+...+. ..+.-.+...+.++..++.||.+++.-.
T Consensus 463 ~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 463 VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEEC
Confidence 9998877765443 2333355678888888999998887643
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.26 E-value=1.3e-07 Score=77.25 Aligned_cols=252 Identities=10% Similarity=0.023 Sum_probs=152.8
Q ss_pred CCeEEEEecCCeEEEEeccCCcee-----eeEEecCCceeEEEEeeCCcEEEEe-cCCCeEEEEEccCceeeeeeccccc
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTE-----KSVKVTDSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNTMASVKEFEAHED 102 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h~~ 102 (312)
|++|+.+.. +.|+.++++..... ..+.........+++.++++.|+.+ ..++.|..++.+.............
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 355665553 47888888754321 1122222345678888876666654 4578999999876543333322224
Q ss_pred ceeEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeC--CCeEEEEEcCCCcc
Q 047355 103 YIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL--DGTIQIWNMDSSAA 179 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~--dg~v~iwd~~~~~~ 179 (312)
....+++++.+..+. +-...+.|.+++....... ............++++|.++.++++... .+.|..++++....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 578899998765554 4455778999987643221 1122222345678888855455555443 46888888865432
Q ss_pred eeeecccccceeEEEEEEcCC-ceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEE
Q 047355 180 KFTLDAHEKGINCIDYFITSD-KVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIW 258 (312)
Q Consensus 180 ~~~~~~~~~~v~~~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iw 258 (312)
.............++ ++++ +.++++-...+.|.++|.........+.. ......++.. .+.++++....+.|..+
T Consensus 159 ~~~~~~~~~~P~gia--~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 159 RILAQDNLGLPNGLT--FDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEEECTTCSCEEEEE--EETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCcEEE--EcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 222212122344454 4554 45666777788999999875544333332 2334677765 45555555567899999
Q ss_pred eCCCcceeeecccCc-cceEEEEEecCCC
Q 047355 259 NATTFRLQNTLSSGL-ERVWSIGYKKGSN 286 (312)
Q Consensus 259 d~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 286 (312)
|..+++...++.... ...+.+++.|++.
T Consensus 235 d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 235 DLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred eCCCCCceEEEccccccccceeeecCccC
Confidence 999888877776443 3578888888865
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.26 E-value=6.8e-09 Score=96.43 Aligned_cols=257 Identities=12% Similarity=0.091 Sum_probs=158.4
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEec-C----CceeEEEEeeCCcEEEEec------CCCeEEEEEccCceeeeee
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVT-D----SPVRTAKFVAREHWIVCGS------DDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~g~------~dg~i~iwd~~~~~~~~~~ 97 (312)
+..|+.++.|+.|..+|..+++.+-.+... . ..+...-...++ .++.++ .+|.|+.||..+++.+-.+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888889999999999988877655542 1 111111111244 455543 3789999999998865444
Q ss_pred cc--c-----------------------------ccceeEEEEecCCCEEEEEeCCCc-------------------EEE
Q 047355 98 EA--H-----------------------------EDYIRSLAVHPTFPFVLTASDDKL-------------------IKL 127 (312)
Q Consensus 98 ~~--h-----------------------------~~~i~~~~~~~~~~~l~t~s~d~~-------------------v~i 127 (312)
.. + ......+++.|....++.+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 31 0 011125788888888888887763 889
Q ss_pred EeCCCCceeeeEecC--Cc-------cc-eE-EEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc-cce-----
Q 047355 128 WDWEKNWECTQTFEG--HS-------HY-VM-QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE-KGI----- 190 (312)
Q Consensus 128 wd~~~~~~~~~~~~~--~~-------~~-v~-~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~-~~v----- 190 (312)
+|..+... ...+.. |. .. +. .+.+.......++.++.+|.++++|.++++.+....... ...
T Consensus 280 lD~~TG~~-~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 280 VNADTGEY-VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EETTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EEccCCce-eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 99887643 333332 21 11 11 112211111368889999999999999988763221100 000
Q ss_pred ---------------------------------eEEEEEEcCCceEEEEEeC----------------------------
Q 047355 191 ---------------------------------NCIDYFITSDKVYLITGSD---------------------------- 209 (312)
Q Consensus 191 ---------------------------------~~~~~~~~~~~~~l~sg~~---------------------------- 209 (312)
..++ .+++..++.....
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a--~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS--YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE--EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCCCcce--ECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0012 2333333333211
Q ss_pred -----------------CCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC
Q 047355 210 -----------------DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 210 -----------------dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
+|.|..||+.+++.+-.+..+. ++..-.+...+.+++.|+.||.++.||.++++.+.++...
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 4789999999999887766443 3444466667789999999999999999999988777644
Q ss_pred ccc-eEEEEEecCCCeEEE
Q 047355 273 LER-VWSIGYKKGSNQVAF 290 (312)
Q Consensus 273 ~~~-v~~~~~~~~~~~l~~ 290 (312)
... ..-+.|..+|++.++
T Consensus 516 ~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCSCCEEEEETTEEEEE
T ss_pred CCcccCceEEEECCEEEEE
Confidence 221 223556788877654
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.24 E-value=9.1e-10 Score=92.75 Aligned_cols=265 Identities=12% Similarity=0.031 Sum_probs=158.0
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
..+.++...+++. |+.++.+ +..+|. +++....+............. +..|..++.++.|..+|.+ ++.....
T Consensus 60 ~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~ 132 (330)
T 3hxj_A 60 IIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRF 132 (330)
T ss_dssp EEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEE
T ss_pred CcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEE
Confidence 3456777777765 4445444 788875 333332222222222222222 5668888889999999988 5555555
Q ss_pred cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047355 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177 (312)
Q Consensus 98 ~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~ 177 (312)
..+...+.++...+++. +..++.++.+..+|.. . .....+......+..+...+ ++. +..++ +.+..+| .++
T Consensus 133 ~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~~~d~-~g~-l~v~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 133 KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G-TEKWRFKTNDAITSAASIGK-DGT-IYFGS--DKVYAIN-PDG 204 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S-CEEEEEECSSCCCSCCEECT-TCC-EEEES--SSEEEEC-TTS
T ss_pred cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C-CEeEEEecCCCceeeeEEcC-CCE-EEEEe--CEEEEEC-CCC
Confidence 55555567777776766 5557778999999976 3 33333333333333344443 333 44555 7899999 666
Q ss_pred cceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEE
Q 047355 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257 (312)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~i 257 (312)
+...........+.++. ..+++. +..++.++.|..+|. +++....+......+.++.+.+++ .|..++.+|.|..
T Consensus 205 ~~~~~~~~~~~~~~~~~--~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~ 279 (330)
T 3hxj_A 205 TEKWNFYAGYWTVTRPA--ISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYA 279 (330)
T ss_dssp CEEEEECCSSCCCSCCE--ECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEE
T ss_pred cEEEEEccCCcceeceE--ECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEE
Confidence 55555544434455443 355654 555677888998885 455555554444434455665555 4677888889999
Q ss_pred EeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 258 WNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 258 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
+|. +++...........+.++...++++ |..++.+|.+++.-.+.
T Consensus 280 ~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 280 INP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp ECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred ECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 995 6666555544445566666667765 55688899888765543
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=4.1e-09 Score=89.69 Aligned_cols=226 Identities=8% Similarity=0.001 Sum_probs=143.4
Q ss_pred ccCcEEEEEEcCCCCeEEEEec-----CCeEEEEeccCCceeeeEEecC------CceeEEEEeeCCcEE-EEec---CC
Q 047355 16 KSDRVKSVDFHPTQPWVLASLY-----SGTVCIWNYHSQTTEKSVKVTD------SPVRTAKFVAREHWI-VCGS---DD 80 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~-----dg~v~iw~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l-~~g~---~d 80 (312)
+...+..++|+++++..++-.. ++.|.+||+.+++....+.... .....+++.+++..+ ++-. .+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 4468999999999875554433 5899999998877666665432 245788888765555 4444 57
Q ss_pred CeEEEEEccCceeeeeeccccccee-EEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCE
Q 047355 81 KFIRVFDYNTMASVKEFEAHEDYIR-SLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159 (312)
Q Consensus 81 g~i~iwd~~~~~~~~~~~~h~~~i~-~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 159 (312)
+.|.+||+.+++....+..|..... ...+.+++..+.+.+.++.++.|.. ....++++|. +..
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~---------------~~~gia~s~d-g~~ 208 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL---------------GVNGIVLDAE-NEW 208 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC---------------CEEEEEECTT-SCE
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec---------------ccceeEeccC-CCE
Confidence 8999999988776666655432111 1334456666667777887766641 1356788884 466
Q ss_pred EEEEeCCC-eEEEEEcC---CCc----c-e--eeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec
Q 047355 160 FASASLDG-TIQIWNMD---SSA----A-K--FTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE 228 (312)
Q Consensus 160 ~~s~s~dg-~v~iwd~~---~~~----~-~--~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 228 (312)
++.+..++ .+..++.. ... . . ....++......++ .+++|.++++...++.|.+||.++++......
T Consensus 209 ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia--~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~ 286 (343)
T 2qe8_A 209 LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS--IDKDHNIYVGDLAHSAIGVITSADRAYKLLVT 286 (343)
T ss_dssp EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE--ECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE--ECCCCCEEEEccCCCeEEEEECCCCCEEEEEE
Confidence 66666555 55555432 110 0 0 01112222223343 46788899999899999999985566443333
Q ss_pred c-cccCeEEEEEeCCCcEEEEEeCCCcEEEEe
Q 047355 229 G-HTNNVTAVCFHPELRIIITASEDGTILIWN 259 (312)
Q Consensus 229 ~-h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd 259 (312)
. +....++++|.++++++++.+..+.+.+|.
T Consensus 287 ~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 287 DEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp CGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 2 245689999999988888877665554444
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.09 E-value=1.5e-07 Score=81.36 Aligned_cols=221 Identities=12% Similarity=0.124 Sum_probs=140.8
Q ss_pred eCCcEEE-EecCCCeEEEEEccCc----eeeeeec------c-cccceeEEEEecCCCEEEEEeCC------CcEEEEeC
Q 047355 69 AREHWIV-CGSDDKFIRVFDYNTM----ASVKEFE------A-HEDYIRSLAVHPTFPFVLTASDD------KLIKLWDW 130 (312)
Q Consensus 69 ~~~~~l~-~g~~dg~i~iwd~~~~----~~~~~~~------~-h~~~i~~~~~~~~~~~l~t~s~d------~~v~iwd~ 130 (312)
.+.++|+ .+..++.|.++|+.+. +..+.++ . ....-..+...|++ +++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 5666655 5667899999998755 5555553 1 11234567778999 66665544 78999997
Q ss_pred CCCceeeeEecCC---ccceEEEEeCCCCCCEEEEEe-------------------CCCeEEEEEcCCCcceeeecccc-
Q 047355 131 EKNWECTQTFEGH---SHYVMQSAFNPKDLNTFASAS-------------------LDGTIQIWNMDSSAAKFTLDAHE- 187 (312)
Q Consensus 131 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~s~s-------------------~dg~v~iwd~~~~~~~~~~~~~~- 187 (312)
.+. +...+.... ...-..+.|+|. .+.+++.. .+.+|.+||+.+.+...++....
T Consensus 172 ~T~-~v~~~~~~~~~~~~~~Yd~~~~p~-~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 172 YSF-EPLGKWEIDRGDQYLAYDFWWNLP-NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTC-CEEEECCSBCTTCCCCCCEEEETT-TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCC-eEEEEEccCCCCccccceEEECCC-CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 754 444444311 122334667874 46677664 37899999999876666665432
Q ss_pred -cceeEEEEEEcCCceEEEEEe------CCCeEEEEeCCCCeE--EEEe--ccc----------------ccCeEEEEEe
Q 047355 188 -KGINCIDYFITSDKVYLITGS------DDFTVKVWDYETKTC--VQIL--EGH----------------TNNVTAVCFH 240 (312)
Q Consensus 188 -~~v~~~~~~~~~~~~~l~sg~------~dg~i~vwd~~~~~~--~~~~--~~h----------------~~~i~~l~~~ 240 (312)
.....+.+.+++++.++..++ .+++|.+|....++. .+.+ ... ......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 223344555588888777666 466888766544432 1211 110 1346789999
Q ss_pred CCCcEEEEEeC-CCcEEEEeCCC---cceeeecccCc--------------cceEEEEEecCCCeEEEEe
Q 047355 241 PELRIIITASE-DGTILIWNATT---FRLQNTLSSGL--------------ERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 241 ~~~~~l~s~s~-dg~v~iwd~~~---~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~ 292 (312)
||+++|..+.. .+.|.++|+.. .++...+.... .....++++|||+.|.++.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99998776665 67999999853 34444433321 1357888999999999888
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=3.1e-09 Score=89.42 Aligned_cols=256 Identities=14% Similarity=0.071 Sum_probs=146.6
Q ss_pred EEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccc
Q 047355 22 SVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHE 101 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~ 101 (312)
+..++.++ .|..++.++.|..|| .+++...........+.++...++ ..|..++.+ |..+|. +++....+....
T Consensus 24 ~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~-g~l~v~t~~--l~~~d~-~g~~~~~~~~~~ 97 (330)
T 3hxj_A 24 SPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKD-GTIYFGSDK--VYAINP-DGTEKWRFDTKK 97 (330)
T ss_dssp CCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTT-TEECCSSCE--EEEECC-CGGGGGGSCC--
T ss_pred CceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecC-CcEEEecCc--EEEECC-CCcEEEEEECCC
Confidence 34444455 567777889999999 666654444333333334444344 456666665 888885 444333333333
Q ss_pred cceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCccee
Q 047355 102 DYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKF 181 (312)
Q Consensus 102 ~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~ 181 (312)
.......+. +..+..++.++.+..+|.. . ............+......+ + ..+..++.++.|..+|.. ++...
T Consensus 98 ~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~~~~~-~-g~l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 98 AIVSDFTIF--EDILYVTSMDGHLYAINTD-G-TEKWRFKTKKAIYATPIVSE-D-GTIYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp ---CCEEEE--TTEEEEECTTSEEEEECTT-S-CEEEEEECSSCCCSCCEECT-T-SCEEEECTTSEEEEECTT-SCEEE
T ss_pred CcccCceEE--CCEEEEEecCCEEEEEcCC-C-CEEEEEcCCCceeeeeEEcC-C-CEEEEEcCCCEEEEECCC-CCEeE
Confidence 223333343 4557778888999999976 3 22333333333333333433 2 347778888999999998 66555
Q ss_pred eecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC
Q 047355 182 TLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 182 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~ 261 (312)
.+......+..+. ...++.+. .++ +.|..+| .+++....+......+.++...+++. |..++.++.|..+|.
T Consensus 171 ~~~~~~~~~~~~~--~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~- 242 (330)
T 3hxj_A 171 RFKTNDAITSAAS--IGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP- 242 (330)
T ss_dssp EEECSSCCCSCCE--ECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-
T ss_pred EEecCCCceeeeE--EcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-
Confidence 5443333344333 34566544 444 7899999 67776666665556688888888875 556677788888874
Q ss_pred CcceeeecccCccceEEEEEecCCCeEEEEecCCeEEE
Q 047355 262 TFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299 (312)
Q Consensus 262 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v 299 (312)
+++...........+..+.+.+++ .|..++.+|.+..
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~ 279 (330)
T 3hxj_A 243 DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYA 279 (330)
T ss_dssp TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEE
T ss_pred CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEE
Confidence 444444443333323334444454 4555666655443
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=1.5e-07 Score=81.42 Aligned_cols=222 Identities=13% Similarity=0.144 Sum_probs=138.4
Q ss_pred CCCCeEEE-EecCCeEEEEeccCC----ceeeeEE---e----cCCceeEEEEeeCCcEEEEecCC------CeEEEEEc
Q 047355 27 PTQPWVLA-SLYSGTVCIWNYHSQ----TTEKSVK---V----TDSPVRTAKFVAREHWIVCGSDD------KFIRVFDY 88 (312)
Q Consensus 27 ~~~~~l~~-~~~dg~v~iw~~~~~----~~~~~~~---~----~~~~v~~~~~~~~~~~l~~g~~d------g~i~iwd~ 88 (312)
+++++|+. +..+++|.++|..+. +..+.+. . ....-..+...+++ .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77887775 567889999998643 3344442 0 00112345567888 66665555 78999999
Q ss_pred cCceeeeeeccccc---ceeEEEEecCCCEEEEEe-------------------CCCcEEEEeCCCCceeeeEecCC-c-
Q 047355 89 NTMASVKEFEAHED---YIRSLAVHPTFPFVLTAS-------------------DDKLIKLWDWEKNWECTQTFEGH-S- 144 (312)
Q Consensus 89 ~~~~~~~~~~~h~~---~i~~~~~~~~~~~l~t~s-------------------~d~~v~iwd~~~~~~~~~~~~~~-~- 144 (312)
++.+.+..++.... .-..+.|+|+++.+++.. .+.+|.+||+... +..+++... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-KRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-EEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-cEeeEEecCCCC
Confidence 99988888763322 235688899999888775 3689999999865 444444432 1
Q ss_pred cceEEE--EeCCCCCCEEEEEe-----CCCeEEEEEcCCCcc--eeee--cccc------------c--ceeEEEEEEcC
Q 047355 145 HYVMQS--AFNPKDLNTFASAS-----LDGTIQIWNMDSSAA--KFTL--DAHE------------K--GINCIDYFITS 199 (312)
Q Consensus 145 ~~v~~~--~~~~~~~~~~~s~s-----~dg~v~iwd~~~~~~--~~~~--~~~~------------~--~v~~~~~~~~~ 199 (312)
.....+ .|+|.+...++++. .+++|.+|..+.+.. .+.+ .... . .-...++.+++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 222334 34886554555555 677888766543211 0111 1100 0 01122345789
Q ss_pred CceEEEEEeC-CCeEEEEeCC---CCeEEEEecccc--------------cCeEEEEEeCCCcEEEEEe
Q 047355 200 DKVYLITGSD-DFTVKVWDYE---TKTCVQILEGHT--------------NNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 200 ~~~~l~sg~~-dg~i~vwd~~---~~~~~~~~~~h~--------------~~i~~l~~~~~~~~l~s~s 250 (312)
|+++|..+.. .+.|.+||+. +.+.+..+.... +.-..++++||+++|+++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9988877664 6799999985 235555443221 1257899999999988887
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=1.7e-06 Score=70.53 Aligned_cols=221 Identities=9% Similarity=-0.031 Sum_probs=138.5
Q ss_pred CcEEEEEEcCCCCeEEEE-ecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEe-cCCCeEEEEEccCceeee
Q 047355 18 DRVKSVDFHPTQPWVLAS-LYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNTMASVK 95 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~ 95 (312)
..+..++|+|++..|+.+ ..++.|.+++.+.................+++.+++..|+.+ ...+.|.+++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 467899999987666655 457899999987654332222222345778888876665544 456889999987543222
Q ss_pred eecccccceeEEEEecCCCEEEEEeC---CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEE
Q 047355 96 EFEAHEDYIRSLAVHPTFPFVLTASD---DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIW 172 (312)
Q Consensus 96 ~~~~h~~~i~~~~~~~~~~~l~t~s~---d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iw 172 (312)
...........++++|++..|..+.. .+.|..++....... ............++++|.+..++++....+.|..+
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~-~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE-EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 22222234678999997665554443 367888876543211 11112223456788888655566777778899999
Q ss_pred EcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccc-cCeEEEEEeCCC
Q 047355 173 NMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT-NNVTAVCFHPEL 243 (312)
Q Consensus 173 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~i~~l~~~~~~ 243 (312)
|+........+... .....++ +. ++..+++...++.|..+|..+++.+..+.... .....+++.|++
T Consensus 195 ~~~g~~~~~~~~~~-~~P~gi~--~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 195 NPAQPGRRKVLEGL-QYPFAVT--SY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp ETTEEEEEEEEECC-CSEEEEE--EE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred ecCCCceEEEecCC-CCceEEE--Ee-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 99764433333221 1223333 33 45566666677899999999998888776433 246788888875
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=5.7e-07 Score=72.92 Aligned_cols=190 Identities=8% Similarity=0.004 Sum_probs=126.3
Q ss_pred ceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEec-CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc
Q 047355 103 YIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFE-GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA 179 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~ 179 (312)
....+++++++.+.++.+. ++.|.+.|..+.. ....+. +.......+.+. +..+.++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~-v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK-VENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC-EEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC-EEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 3578999998655555443 6799999998763 333332 222222334444 334556666789999999998887
Q ss_pred eeeeccc-ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccc-----cCeEEEEEeCCCcEEEEEeCCC
Q 047355 180 KFTLDAH-EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT-----NNVTAVCFHPELRIIITASEDG 253 (312)
Q Consensus 180 ~~~~~~~-~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-----~~i~~l~~~~~~~~l~s~s~dg 253 (312)
+.++... ..+. . .++|+..++.+..+++|.++|.++.+....+.--. ..++.+.|. +++.++..-.++
T Consensus 99 ~~~i~~g~~~g~-g----lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 99 IKNFTHQMKDGW-G----LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEEECCSSSCC-E----EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEEECCCCCeE-E----EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 7776533 2221 1 23355555555678999999999988777665221 246788888 676666666688
Q ss_pred cEEEEeCCCcceeeecccC-c------------cceEEEEEecCCCeEE-EEecCCeEEEEe
Q 047355 254 TILIWNATTFRLQNTLSSG-L------------ERVWSIGYKKGSNQVA-FGCDNGTLIVKI 301 (312)
Q Consensus 254 ~v~iwd~~~~~~~~~~~~~-~------------~~v~~~~~~~~~~~l~-~~~~~g~i~v~~ 301 (312)
.|.+.|..+++....+.-. . .....++|+|+++.|. ++...+++.+.-
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 9999999999887776532 1 3568999999987655 454566666443
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.97 E-value=6.7e-08 Score=82.57 Aligned_cols=213 Identities=8% Similarity=-0.093 Sum_probs=127.0
Q ss_pred eEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEe----------CCCcEEEEeCCCCceeeeEecCC--c-----
Q 047355 82 FIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTAS----------DDKLIKLWDWEKNWECTQTFEGH--S----- 144 (312)
Q Consensus 82 ~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s----------~d~~v~iwd~~~~~~~~~~~~~~--~----- 144 (312)
.|.++|..+++.+..+.....+ .+.++|+++++..+. .++.|.+||..+. +....+... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEEEEECCCccccccC
Confidence 8889999999988888766666 799999999888775 4788999998876 334444321 0
Q ss_pred cceEEEEeCCCCCCEEEEEeC--CCeEEE--EEcCCCcceeeecc---------c---------ccceeEEEEE------
Q 047355 145 HYVMQSAFNPKDLNTFASASL--DGTIQI--WNMDSSAAKFTLDA---------H---------EKGINCIDYF------ 196 (312)
Q Consensus 145 ~~v~~~~~~~~~~~~~~s~s~--dg~v~i--wd~~~~~~~~~~~~---------~---------~~~v~~~~~~------ 196 (312)
.....+.++|.+ .+++++.. +..+.+ +|..+ ...+.. + ...+..++..
T Consensus 124 ~~P~~ia~SpDG-k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 124 PRVHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CCTTSEEECTTS-SCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CCcceEEEcCCC-CEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 122346788854 55555543 457888 88865 111110 0 0000000000
Q ss_pred ------------------EcCCceEEEEEeCCCeEEEEeCCCC--eEEEEecc-------c---ccCeEEEEEeCCCcEE
Q 047355 197 ------------------ITSDKVYLITGSDDFTVKVWDYETK--TCVQILEG-------H---TNNVTAVCFHPELRII 246 (312)
Q Consensus 197 ------------------~~~~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~-------h---~~~i~~l~~~~~~~~l 246 (312)
..+++..++..+. +.|.+.|..+. +....+.. + ......++|+|+++.+
T Consensus 200 ~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred CeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 0111111222223 56777776532 22222210 0 0111227899998877
Q ss_pred EEEeC---------CCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEec--CCeEEEEecc
Q 047355 247 ITASE---------DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCD--NGTLIVKIGN 303 (312)
Q Consensus 247 ~s~s~---------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~v~~~~ 303 (312)
+.+.. ++.+.++|..+.+.+.++.... ..+.++|+|||+.+.++.. ++++.|.=..
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred EEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 76533 2356699999999888776443 6899999999996554444 7888776443
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=1.6e-08 Score=90.37 Aligned_cols=241 Identities=9% Similarity=0.044 Sum_probs=155.3
Q ss_pred CCCCeEEEEec-CCeEEEEeccCCceeeeEEecC-CceeEEEE-e-eCCcEEEEec------------------CCCeEE
Q 047355 27 PTQPWVLASLY-SGTVCIWNYHSQTTEKSVKVTD-SPVRTAKF-V-AREHWIVCGS------------------DDKFIR 84 (312)
Q Consensus 27 ~~~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~-~~v~~~~~-~-~~~~~l~~g~------------------~dg~i~ 84 (312)
+||++|+.... +++|.+.|++..+..+.+.... .....+.+ . |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 48999998765 4579999999988877665443 33556666 4 8999999884 346789
Q ss_pred EEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCC---------------cEEEEeCCCCceeeeEecCCccceEE
Q 047355 85 VFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK---------------LIKLWDWEKNWECTQTFEGHSHYVMQ 149 (312)
Q Consensus 85 iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~---------------~v~iwd~~~~~~~~~~~~~~~~~v~~ 149 (312)
+.|.++++...++.... .-..++++|+++++++.+.+. .+.+.|+.....
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~-------------- 243 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK-------------- 243 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH--------------
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE--------------
Confidence 99999987776665322 346678999999988777653 233333221100
Q ss_pred EEeCCCCCCEEEEEeCCCeEEEEEcCC--Ccc-eeeecccccceeEEEEEEcCCceEEEEE-eCCCeEEEEeCCCCe---
Q 047355 150 SAFNPKDLNTFASASLDGTIQIWNMDS--SAA-KFTLDAHEKGINCIDYFITSDKVYLITG-SDDFTVKVWDYETKT--- 222 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~dg~v~iwd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~--- 222 (312)
+.+.+....+ +.|.+.|.++ ... ...+.... ...++. ++|||++++.. ..+.+|.++|+.+.+
T Consensus 244 --~v~~Gk~~~i-----~~V~VID~~~~~~~~~~~~Ipvg~-~PhGv~--~sPDGk~v~V~~~~s~~VsVid~~~~~~~~ 313 (595)
T 1fwx_A 244 --AIAAGDYQEL-----NGVKVVDGRKEASSLFTRYIPIAN-NPHGCN--MAPDKKHLCVAGKLSPTVTVLDVTRFDAVF 313 (595)
T ss_dssp --HHHHTCSEEE-----TTEEEEECSGGGCCSSEEEEEEES-SCCCEE--ECTTSSEEEEECTTSSBEEEEEGGGHHHHH
T ss_pred --eccCCCeeEE-----CcEEEEeCcccCCceeEEEEecCC-CceEEE--EcCCCCEEEEeCCCCCeEEEEECccccccc
Confidence 1111111222 4599999987 333 33443322 233443 58899876654 478899999998552
Q ss_pred ---------EEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC----------cceeeecccCccc-----eEE
Q 047355 223 ---------CVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATT----------FRLQNTLSSGLER-----VWS 278 (312)
Q Consensus 223 ---------~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~----------~~~~~~~~~~~~~-----v~~ 278 (312)
....+. -......++|+|+|....+.--|+.|..||+.+ .+.+.++.-+... ...
T Consensus 314 ~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g 392 (595)
T 1fwx_A 314 YENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMG 392 (595)
T ss_dssp HSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTT
T ss_pred ccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccc
Confidence 333333 234578999999996566777799999999876 3445555444221 122
Q ss_pred EEEecCCCeEEEEec
Q 047355 279 IGYKKGSNQVAFGCD 293 (312)
Q Consensus 279 ~~~~~~~~~l~~~~~ 293 (312)
..++|||++|.+...
T Consensus 393 ~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 393 ETLDATNDWLVCLSK 407 (595)
T ss_dssp TSTTCCSSEEEEEES
T ss_pred eEeCCCCCEEEEcCC
Confidence 345799999988765
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.96 E-value=8.9e-07 Score=71.08 Aligned_cols=190 Identities=13% Similarity=0.143 Sum_probs=124.3
Q ss_pred eeeeecccc--cceeEEEEecCCCEEEEEeCCC--cEEEEeCCCCceeeeEecCCcc-ceEEEEeCCCCCCEEEEEeCCC
Q 047355 93 SVKEFEAHE--DYIRSLAVHPTFPFVLTASDDK--LIKLWDWEKNWECTQTFEGHSH-YVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 93 ~~~~~~~h~--~~i~~~~~~~~~~~l~t~s~d~--~v~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~s~s~dg 167 (312)
.++++ .|. .....+.++ ++.+..+.+.+| .|+.+|..+.. .......... +-..+... +..+.+..-.++
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk-v~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK-TLQQIELGKRYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC-EEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc-EEEEEecCCccceeEEEEe--CCEEEEEEeeCC
Confidence 34445 343 335778888 566666777766 89999988763 3333332222 22223333 334555555689
Q ss_pred eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc--c---cCeEEEEEeCC
Q 047355 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH--T---NNVTAVCFHPE 242 (312)
Q Consensus 168 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~---~~i~~l~~~~~ 242 (312)
.+.+||..+.+.+.++.....+.. + ++++..|+....+++|.++|.++.+.+..+.-. . ..++.+.|. +
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG~g-l----t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEGWG-L----THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCC-E----EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECccCcEEEEEECCCCceE-E----ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 999999999988877765433322 2 234455555556789999999998887776532 1 335667886 6
Q ss_pred CcEEEEEeCCCcEEEEeCCCcceeeecccC------------ccceEEEEEecCCCeEEEEec
Q 047355 243 LRIIITASEDGTILIWNATTFRLQNTLSSG------------LERVWSIGYKKGSNQVAFGCD 293 (312)
Q Consensus 243 ~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~ 293 (312)
++..+..-.+..|.+.|.++++....+... ......+||+|+++.|...+.
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 766655556889999999999886665432 235689999999888776665
No 242
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.95 E-value=6e-07 Score=83.05 Aligned_cols=268 Identities=11% Similarity=0.019 Sum_probs=149.6
Q ss_pred EEEEcC-CCCeEEEEecCC-----------eEEEEeccCCceeeeEEe---cCCceeEEEEeeCCcEEEEecC-CCeEEE
Q 047355 22 SVDFHP-TQPWVLASLYSG-----------TVCIWNYHSQTTEKSVKV---TDSPVRTAKFVAREHWIVCGSD-DKFIRV 85 (312)
Q Consensus 22 ~~~~~~-~~~~l~~~~~dg-----------~v~iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~g~~-dg~i~i 85 (312)
+.++.| +++.++.|+.+. .+.+||..+.+....... +......+++..+++.++.|+. ++.+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 567777 888888887543 578899877654322222 1222334667788898888884 568999
Q ss_pred EEccCceeeeeeccccc-ceeEEEEecCCCEEEEEe-CC-----CcEEEEeCCCCceeeeEecCCc-cceE----EEEeC
Q 047355 86 FDYNTMASVKEFEAHED-YIRSLAVHPTFPFVLTAS-DD-----KLIKLWDWEKNWECTQTFEGHS-HYVM----QSAFN 153 (312)
Q Consensus 86 wd~~~~~~~~~~~~h~~-~i~~~~~~~~~~~l~t~s-~d-----~~v~iwd~~~~~~~~~~~~~~~-~~v~----~~~~~ 153 (312)
||..+..-.+.-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+..-. .+.... .... ...+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~--~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT--SLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE--EETTSCSGGGCCCCTTGGGT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce--eCCCccccccccccccceee
Confidence 99876532211111111 123455667889989888 44 56899998654221 110000 0000 00111
Q ss_pred CCCCCEEEEEeCCC---------eEEEEEcCCCcceeeeccccc---------ceeEEEEEEcCCceEEEEEeCCC----
Q 047355 154 PKDLNTFASASLDG---------TIQIWNMDSSAAKFTLDAHEK---------GINCIDYFITSDKVYLITGSDDF---- 211 (312)
Q Consensus 154 ~~~~~~~~s~s~dg---------~v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~sg~~dg---- 211 (312)
. +...++.++.+| .+..||..+.........+.. .-.++. ....++.+++.|+.++
T Consensus 348 ~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~-~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 348 S-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVM-YDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp T-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEE-EETTTTEEEEECCBSSSSSS
T ss_pred c-CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEe-ccCCCCeEEEEeCCCCCCCC
Confidence 2 223445554443 567888876653322221111 111221 1234677888887543
Q ss_pred -------eEEEEeCCCCeEEEEe--cccccC-eEEEEEeCCCcEEEEEeCC-----------CcEEEEeCCCcce--eee
Q 047355 212 -------TVKVWDYETKTCVQIL--EGHTNN-VTAVCFHPELRIIITASED-----------GTILIWNATTFRL--QNT 268 (312)
Q Consensus 212 -------~i~vwd~~~~~~~~~~--~~h~~~-i~~l~~~~~~~~l~s~s~d-----------g~v~iwd~~~~~~--~~~ 268 (312)
.|.+||..+....... ..+... -.+.+..|++++++.|+.+ ..+.+||..+.+- ...
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~ 505 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP 505 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCC
T ss_pred CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCC
Confidence 6888998877655443 222222 2355667899999999864 4689999876432 222
Q ss_pred cccCccceEEEEEecCCCeEEEEec
Q 047355 269 LSSGLERVWSIGYKKGSNQVAFGCD 293 (312)
Q Consensus 269 ~~~~~~~v~~~~~~~~~~~l~~~~~ 293 (312)
+........+..+.|+++.+++|+.
T Consensus 506 ~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 506 NSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCccccccHhhcCCCcEEEecCCC
Confidence 2211122233445689999999985
No 243
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.95 E-value=1.1e-05 Score=68.59 Aligned_cols=259 Identities=13% Similarity=0.023 Sum_probs=158.4
Q ss_pred ccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEe-cCCCeEEEEEccCceee
Q 047355 16 KSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNTMASV 94 (312)
Q Consensus 16 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~ 94 (312)
+.+...+.+..+ .++|+.+. ...|+..+++......... .......++|.+.+..|+-. ...+.|..++++.....
T Consensus 32 ~~d~~~C~~~~~-~~~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 32 RPDRRSCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp CTTSSCEEESSS-CCEEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCCccccccc-CceeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 345556666666 34555443 3557888887654433332 23346788898766666644 46788999998765433
Q ss_pred eeecccccceeEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC-CeEEEE
Q 047355 95 KEFEAHEDYIRSLAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD-GTIQIW 172 (312)
Q Consensus 95 ~~~~~h~~~i~~~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-g~v~iw 172 (312)
............+++.+.+..| .+-...+.|.+.+...... .............++++|.++.++.+-... +.|..+
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 3333333345788998765554 4555677899998765422 122222334456788888666666666666 889999
Q ss_pred EcCCCcceeeecccccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeC
Q 047355 173 NMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 173 d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~ 251 (312)
+++...........-...+.+++ ++ ++.+.++-...+.|..+|.........+........++++ .++.++.+-..
T Consensus 188 ~~dG~~~~~~~~~~~~~PnGla~--d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~ 264 (349)
T 3v64_C 188 SMDGSGRRIIADTHLFWPNGLTI--DYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH 264 (349)
T ss_dssp ETTSCSCEESCCSSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred eCCCCCcEEEEECCCCCcceEEE--eCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCC
Confidence 88764433322222233455554 43 5666677777889999998754433334333445678888 45566677777
Q ss_pred CCcEEEEeCCCcceeeecccCccceEEEEE
Q 047355 252 DGTILIWNATTFRLQNTLSSGLERVWSIGY 281 (312)
Q Consensus 252 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 281 (312)
.+.|..++..+++....+......+..+++
T Consensus 265 ~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 265 TKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp TTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 788998986666665555555555555555
No 244
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=3.6e-07 Score=84.59 Aligned_cols=266 Identities=13% Similarity=0.107 Sum_probs=162.1
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEecCCc----------e-eEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSP----------V-RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
+..|++++.++.|.-+|..+++.+-.+...... + ..... .+..++.++.|+.|..+|.++++.+-.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 557788888999999999888776555432211 0 11122 3567888899999999999998876555
Q ss_pred cccc----cceeE-EEEecCCCEEEEEeC------CCcEEEEeCCCCceeeeEecC---Cc-------------------
Q 047355 98 EAHE----DYIRS-LAVHPTFPFVLTASD------DKLIKLWDWEKNWECTQTFEG---HS------------------- 144 (312)
Q Consensus 98 ~~h~----~~i~~-~~~~~~~~~l~t~s~------d~~v~iwd~~~~~~~~~~~~~---~~------------------- 144 (312)
+... ..+.+ -.+. ++ .++.+.. ++.+..+|..+.... ..+.. ..
T Consensus 144 ~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~-W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLA-WRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEE-EEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred ccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEE-EEecccCCCCCccccccccccccccCCcc
Confidence 4321 11111 1111 33 4444432 588999998766332 22221 00
Q ss_pred ---------cceEEEEeCCCCCCEEEEEeCCC-------------------eEEEEEcCCCcceeeecc--cc-------
Q 047355 145 ---------HYVMQSAFNPKDLNTFASASLDG-------------------TIQIWNMDSSAAKFTLDA--HE------- 187 (312)
Q Consensus 145 ---------~~v~~~~~~~~~~~~~~s~s~dg-------------------~v~iwd~~~~~~~~~~~~--~~------- 187 (312)
.......++|. .++++.++.++ .|..+|.++++.+..++. |.
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPE-LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp CHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred ceeeeCCCCccccceEEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 00112455553 36777777666 499999999988776643 22
Q ss_pred cceeEEEEEEcCCce---EEEEEeCCCeEEEEeCCCCeEEEEecccc------------cCe------------------
Q 047355 188 KGINCIDYFITSDKV---YLITGSDDFTVKVWDYETKTCVQILEGHT------------NNV------------------ 234 (312)
Q Consensus 188 ~~v~~~~~~~~~~~~---~l~sg~~dg~i~vwd~~~~~~~~~~~~h~------------~~i------------------ 234 (312)
.+....++. .++. .++.++.+|.++++|.++++.+...+... .++
T Consensus 300 ~~~~~~d~~--~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 300 QQITLAELN--IDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp SCEEEEEEE--ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred CCcEEEEec--cCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 122222222 2443 68889999999999999998874332111 000
Q ss_pred ------EEEEEeCCCcEEEEE------------------------------------eCCCcEEEEeCCCcceeeecccC
Q 047355 235 ------TAVCFHPELRIIITA------------------------------------SEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 235 ------~~l~~~~~~~~l~s~------------------------------------s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
..++++|+..+++.. ..+|.|..||..+++.+.+....
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~ 457 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP 457 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC
Confidence 126788876665532 13488999999999887665433
Q ss_pred ccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 273 LERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 273 ~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
. ..+...+...+.++.+++.+|.+++.-.+
T Consensus 458 ~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 458 T-HWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp S-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred C-CCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 2 23333445677888888888888766443
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.91 E-value=4.3e-05 Score=72.29 Aligned_cols=268 Identities=13% Similarity=0.130 Sum_probs=164.2
Q ss_pred EEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeE-EecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec
Q 047355 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV-KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 20 i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 98 (312)
|.++..++++. |..+..++.+..|+..+.+..... ......|.++...+++. |..|+.++-+..||..+.+......
T Consensus 175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeec
Confidence 88888887775 445666656888987665433221 11234577776666665 4445544448889987654332211
Q ss_pred c-------cccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec--------CCccceEEEEeCCCCCCEEEEE
Q 047355 99 A-------HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE--------GHSHYVMQSAFNPKDLNTFASA 163 (312)
Q Consensus 99 ~-------h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~s~ 163 (312)
. ....|.++...+++.+.+ |+.+ -+.+||..... ...+. -....|.++...+. ..+..|
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~--~~~~~~~~~~~~~l~~~~i~~i~~D~~--g~lWig 326 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDS--FASYSSNPVENGSLSQRSVRSIFMDSQ--GGMWLG 326 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTE--EEEECCCTTSTTSCSSSCEEEEEECTT--SCEEEE
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCe--EEEEecCCCCCCCCCCCcEEEEEEeCC--cCEEEE
Confidence 1 235699999888887655 4444 58888865432 11221 12345777777653 346678
Q ss_pred eCCCeEEEEEcCCCcceeeecc------cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc--------
Q 047355 164 SLDGTIQIWNMDSSAAKFTLDA------HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG-------- 229 (312)
Q Consensus 164 s~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-------- 229 (312)
+.++-|..|+..+......... ....|.++. .+.++. |-.|+.++-|..|+..+++.......
T Consensus 327 t~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~--~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 327 TYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV--EDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp ESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE--ECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CC
T ss_pred ECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE--ECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 8878899998765432221110 123355554 455665 44577777799999887665443221
Q ss_pred cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecc----cCccceEEEEEecCCCeEEEEecCCeEEE
Q 047355 230 HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS----SGLERVWSIGYKKGSNQVAFGCDNGTLIV 299 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~g~i~v 299 (312)
....|.++...++++.|..|+.++-|..+|..+++...-.. .....|.++...++|+..+... +|..++
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~ 476 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRF 476 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEE
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEE
Confidence 23569999999888856677877789999988765433221 1235689998888887666544 664443
No 246
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.90 E-value=8e-06 Score=70.45 Aligned_cols=257 Identities=12% Similarity=0.003 Sum_probs=156.9
Q ss_pred EEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEe-cCCCeEEEEEccCceeeeeec
Q 047355 20 VKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 20 i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~ 98 (312)
-.+.+..+ ..+|+.+ ....|+..+++......... .......++|.+.+..|+-. ...+.|..++++.......+.
T Consensus 79 ~~C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALGP-EPVLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECSS-CCEEEEE-CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CeECCccc-cceeEee-cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 34555555 3444444 34678888887654433333 23346688898766666544 467889999987654433333
Q ss_pred ccccceeEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC-CeEEEEEcCC
Q 047355 99 AHEDYIRSLAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD-GTIQIWNMDS 176 (312)
Q Consensus 99 ~h~~~i~~~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-g~v~iwd~~~ 176 (312)
........+++.+.+..| ++-...+.|.+.+...... ...+.........++++|.++.++++-... +.|..++++.
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 333345678888765555 4555567788888654322 122222334556778888766666666555 7899888876
Q ss_pred CcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEE
Q 047355 177 SAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTIL 256 (312)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~ 256 (312)
..............+.+++.+ .++.++++-+..+.|..+|.........+........++++ ..+.++.+-...+.|.
T Consensus 235 ~~~~~~~~~~~~~PnGlavd~-~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 235 SGRRIIADTHLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSIN 312 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEEG-GGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEE
T ss_pred CCcEEEEECCCCCeeeEEEeC-CCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEE
Confidence 544333322223345565432 34566667777889999998754433334333445678888 4556777777788999
Q ss_pred EEeCCCcceeeecccCccceEEEEEe
Q 047355 257 IWNATTFRLQNTLSSGLERVWSIGYK 282 (312)
Q Consensus 257 iwd~~~~~~~~~~~~~~~~v~~~~~~ 282 (312)
.++..+++....+......+..+++.
T Consensus 313 ~~~~~~G~~~~~i~~~~~~p~gi~v~ 338 (386)
T 3v65_B 313 SANKFTGKNQEIIRNKLHFPMDIHTL 338 (386)
T ss_dssp EEETTTCCSCEEEECSCSCCCCEEEE
T ss_pred EEECCCCcceEEEccCCCCCceEEEE
Confidence 99976777666666555666666654
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.89 E-value=8.6e-07 Score=82.10 Aligned_cols=256 Identities=9% Similarity=0.089 Sum_probs=150.2
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEecCC----ceeEEEEeeCCcEEEEecC------CCeEEEEEccCceeeeeec
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS----PVRTAKFVAREHWIVCGSD------DKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~ 98 (312)
+..++.++.|+.|..+|..+++.+-.+..... .+...-...+ ..++.+.. +|.|..+|.++++.+-.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 45788888999999999998887766554211 1111111123 45555543 5899999999987665543
Q ss_pred cc-------------------------------ccceeEEEEecCCCEEEEEeCCCc-------------------EEEE
Q 047355 99 AH-------------------------------EDYIRSLAVHPTFPFVLTASDDKL-------------------IKLW 128 (312)
Q Consensus 99 ~h-------------------------------~~~i~~~~~~~~~~~l~t~s~d~~-------------------v~iw 128 (312)
.. ......+++.|....++.++.++. |.-+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 001124678888888888876653 8888
Q ss_pred eCCCCceeeeEecC--Cc-------cceE--EEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc----------
Q 047355 129 DWEKNWECTQTFEG--HS-------HYVM--QSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE---------- 187 (312)
Q Consensus 129 d~~~~~~~~~~~~~--~~-------~~v~--~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~---------- 187 (312)
|..+... ...+.. |. .... .+.+.......++.++.+|.++++|..+++.+.......
T Consensus 276 D~~tG~~-~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 276 RPDTGKL-AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp CTTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred cCCCCce-eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 8776633 333322 21 1111 122221111258889999999999999887763321110
Q ss_pred --cce------------------------eEEEEEEcCCceEEEE-----------------------------------
Q 047355 188 --KGI------------------------NCIDYFITSDKVYLIT----------------------------------- 206 (312)
Q Consensus 188 --~~v------------------------~~~~~~~~~~~~~l~s----------------------------------- 206 (312)
.++ ..++ .+++...+..
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a--~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMS--FNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCE--EETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcce--ECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 000 0011 1222122111
Q ss_pred -EeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccc-eEEEEEecC
Q 047355 207 -GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER-VWSIGYKKG 284 (312)
Q Consensus 207 -g~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~ 284 (312)
...+|.|..||..+++.+-....+ .+.....+...+.+++.++.|+.+++||..+++.+.++...... ..-+.+..+
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 113488999999999887665533 33444455556788999999999999999999887766543211 012233456
Q ss_pred CCeEE
Q 047355 285 SNQVA 289 (312)
Q Consensus 285 ~~~l~ 289 (312)
|++.+
T Consensus 512 G~~yv 516 (668)
T 1kv9_A 512 GRQYV 516 (668)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 66444
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.88 E-value=4.6e-05 Score=72.06 Aligned_cols=270 Identities=8% Similarity=0.055 Sum_probs=165.1
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe-------cCCceeEEEEeeCCcEEEEecCCCeEEEEEcc
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV-------TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYN 89 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~ 89 (312)
...|.++..++++. |..|..++.+.+||..+.+....... ....|.++...+++.. ..|+.+| |.+|+..
T Consensus 214 ~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~G-l~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRL-WIGTFND-LNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCE-EEEESSC-EEEEETT
T ss_pred CCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCE-EEEeCCh-hheEcCC
Confidence 45688888887775 44555555588898766543221111 1345777777666654 4455554 7888887
Q ss_pred Cceeeeeec-------ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecC-------CccceEEEEeCCC
Q 047355 90 TMASVKEFE-------AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG-------HSHYVMQSAFNPK 155 (312)
Q Consensus 90 ~~~~~~~~~-------~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~-------~~~~v~~~~~~~~ 155 (312)
+........ .....|.++...+++.+- .|+.++-+..|+..... ...+.. ....|.++...+.
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEECTT
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEECCC
Confidence 654332211 123569999988888754 46677778888754321 111111 2345777776653
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcceeeecc--------cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEe
Q 047355 156 DLNTFASASLDGTIQIWNMDSSAAKFTLDA--------HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227 (312)
Q Consensus 156 ~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 227 (312)
..+..|+.++-|..||..+......... ....|.++. ..+++..|..|+.++-|..||..+++.....
T Consensus 368 --g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~--~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 368 --KNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY--VDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp --SCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEE--EETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred --CCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE--EcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 3466788887899999876544322211 123455554 3556663556777777999998877654432
Q ss_pred c----ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeeccc------CccceEEEEEecCCCeEEEEecCCeE
Q 047355 228 E----GHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSS------GLERVWSIGYKKGSNQVAFGCDNGTL 297 (312)
Q Consensus 228 ~----~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~g~i 297 (312)
. .+...|.++...+++.+.+.. . +-+.+||..+.+....... ....|.++...++|+..+.+. +|..
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~ 520 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLS 520 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEE
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceE
Confidence 2 134579999998888755544 4 4588899877654332211 235688998888888776554 6655
Q ss_pred EE
Q 047355 298 IV 299 (312)
Q Consensus 298 ~v 299 (312)
++
T Consensus 521 ~~ 522 (795)
T 4a2l_A 521 VF 522 (795)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.87 E-value=4.5e-06 Score=70.03 Aligned_cols=235 Identities=10% Similarity=0.017 Sum_probs=138.9
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEec--------------------CCceeEEEEeeCCcEEEEec
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT--------------------DSPVRTAKFVAREHWIVCGS 78 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~~l~~g~ 78 (312)
....+++++++..++++..++.|..|+....+. ..+... ......+++.+++..|+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 456788999998888898999999998875433 223211 12356777886334555555
Q ss_pred CCCeEEEEEccCceeeeeecc-----cccceeEEEEec-CCCEEEEEeC-----------------CCcEEEEeCCCCce
Q 047355 79 DDKFIRVFDYNTMASVKEFEA-----HEDYIRSLAVHP-TFPFVLTASD-----------------DKLIKLWDWEKNWE 135 (312)
Q Consensus 79 ~dg~i~iwd~~~~~~~~~~~~-----h~~~i~~~~~~~-~~~~l~t~s~-----------------d~~v~iwd~~~~~~ 135 (312)
..+.|..+|..++.. +.+.. .......+++.+ ++.+.++-.. ++.+..+|......
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 455588888765432 22211 112467899999 8887665432 36677888654321
Q ss_pred eeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc--eeeecccccceeEEEEEEcCCceEEEEEeC----
Q 047355 136 CTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA--KFTLDAHEKGINCIDYFITSDKVYLITGSD---- 209 (312)
Q Consensus 136 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~---- 209 (312)
..+.........++++|.+..++++-+.++.|..|++..... ...+..... ...+ ..+++|.+.++...
T Consensus 178 --~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi--~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 178 --TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNI--KRNADGHFWVSSSEELDG 252 (322)
T ss_dssp --EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEE--EECTTSCEEEEEEEETTS
T ss_pred --EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCe--EECCCCCEEEEecCcccc
Confidence 111111122345678875433455556778999999875321 111111111 3333 35677776666544
Q ss_pred ------CCeEEEEeCCCCeEEEEecccc----cCeEEEEEeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 210 ------DFTVKVWDYETKTCVQILEGHT----NNVTAVCFHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 210 ------dg~i~vwd~~~~~~~~~~~~h~----~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
.+.|..+|.. ++.+..+.... ..++++++ .+++++++....+.|..+++..
T Consensus 253 ~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp STTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4678888874 66666554332 34677776 4666666666778899998753
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=2.7e-06 Score=68.33 Aligned_cols=181 Identities=9% Similarity=0.040 Sum_probs=122.0
Q ss_pred ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceee
Q 047355 103 YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFT 182 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~ 182 (312)
....+.++. +.+..+.+.+|.|+++|..+.... ........+-..+.+. +..+....-.++.+.+||..+.+.+.+
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~-~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPV-WMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCS-EEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEE-eEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 346788874 566678888899999999876433 3332222222334444 335666666789999999999988877
Q ss_pred ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc--c---cCeEEEEEeCCCcEEEEEeCCCcEEE
Q 047355 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH--T---NNVTAVCFHPELRIIITASEDGTILI 257 (312)
Q Consensus 183 ~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~---~~i~~l~~~~~~~~l~s~s~dg~v~i 257 (312)
+.....+. .++ +++..|+....+++|.++|.++.+.+..+.-. . ..++.+.|. +++.++..-.+..|.+
T Consensus 132 i~~~~eGw-GLt----~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 132 TRYSGEGW-GLC----YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EECSSCCC-CEE----EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EeCCCcee-EEe----cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence 76543332 222 23455555566899999999998887766532 2 245677877 6766655556789999
Q ss_pred EeCCCcceeeecccC-------------ccceEEEEEecCCCeEEEEec
Q 047355 258 WNATTFRLQNTLSSG-------------LERVWSIGYKKGSNQVAFGCD 293 (312)
Q Consensus 258 wd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~ 293 (312)
.|.++++....+.-. ......+||.|+++.|...+.
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999999876655432 235789999998777665554
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.83 E-value=7.5e-06 Score=65.11 Aligned_cols=198 Identities=9% Similarity=0.063 Sum_probs=126.4
Q ss_pred eeeeecccc--cceeEEEEecCCCEEEEEeCCC--cEEEEeCCCCceeeeEecCCcc-ceEEEEeCCCCCCEEEEEeCCC
Q 047355 93 SVKEFEAHE--DYIRSLAVHPTFPFVLTASDDK--LIKLWDWEKNWECTQTFEGHSH-YVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 93 ~~~~~~~h~--~~i~~~~~~~~~~~l~t~s~d~--~v~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~s~s~dg 167 (312)
.+.++ .|. .....+.|++ +.+..+.+.+| .|+.+|..+.. ......-... +-..+... +..+....-.++
T Consensus 11 v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk-v~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR-ILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC-EEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC-EEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 34445 443 3466888886 55566666654 89999998763 3333322222 11223333 334555566789
Q ss_pred eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccc-----cCeEEEEEeCC
Q 047355 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHT-----NNVTAVCFHPE 242 (312)
Q Consensus 168 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-----~~i~~l~~~~~ 242 (312)
.+.+||..+.+.+.++.....+. .++ .++..|..+..++.|.++|.++.+.+..+.-.. ..++.+.+. +
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gw-glt----~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGW-ALT----SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCC-EEE----ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECCcCcEEEEEeCCCCce-EEe----eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 99999999998887776544332 222 244445555568899999999988877765321 245667765 6
Q ss_pred CcEEEEEeCCCcEEEEeCCCcceeeecccC-------------ccceEEEEEecCCCeEEEEec--CCeEEEEe
Q 047355 243 LRIIITASEDGTILIWNATTFRLQNTLSSG-------------LERVWSIGYKKGSNQVAFGCD--NGTLIVKI 301 (312)
Q Consensus 243 ~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~--~g~i~v~~ 301 (312)
++.++..-.+..|.+.|.++++....+.-. ......+||+|+++.|...+. ...-.|++
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 666655556789999999999876654422 235789999998887766654 33333443
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.79 E-value=9.4e-06 Score=67.58 Aligned_cols=228 Identities=10% Similarity=0.000 Sum_probs=129.9
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecC-C-CeEEEEEccCceeee
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD-D-KFIRVFDYNTMASVK 95 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d-g~i~iwd~~~~~~~~ 95 (312)
.....++|+++++.+++-..++.|..||.+.. ....+. .......+++.++++.+++... + ..|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45788999999986666667899999987653 333332 3345677888888886555433 2 246667766654322
Q ss_pred eec-ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEe-------c--CCccceEEEEeCCCCCCEEEEEeC
Q 047355 96 EFE-AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF-------E--GHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 96 ~~~-~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~-------~--~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
... ........++..+.+..+++-..++.|..+|........... . ..-.....+ +|.+..++++-+.
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 221 111223445544544444444457888888865321111100 0 111122333 4444345666677
Q ss_pred CCeEEEEEcCC-Ccc--eeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE--EecccccCeEEEEEe
Q 047355 166 DGTIQIWNMDS-SAA--KFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ--ILEGHTNNVTAVCFH 240 (312)
Q Consensus 166 dg~v~iwd~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~~i~~l~~~ 240 (312)
.+.|..|++.. +.. ...+.. ......+ .++++|.++++....+.|.++|.. ++... .+.......++++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi--~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVE-QTNIDDF--AFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEE-SCCCSSE--EEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred CCEEEEEEeCCCCCCCccEEEec-cCCCCCe--EECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 88999999875 221 111110 0112223 246788877777778899999975 55432 233333568999998
Q ss_pred ---CCCcEEEEEeCCC
Q 047355 241 ---PELRIIITASEDG 253 (312)
Q Consensus 241 ---~~~~~l~s~s~dg 253 (312)
|+++.|+.++..+
T Consensus 264 g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 264 QTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CSTTTTTEEEEEECTT
T ss_pred cccCCCCEEEEECCCC
Confidence 8877666555443
No 253
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.79 E-value=9.2e-06 Score=65.80 Aligned_cols=193 Identities=9% Similarity=-0.000 Sum_probs=125.2
Q ss_pred cEEEEEEcCCCCeEEEE-ec--CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEe-cCCCeEEEEEccCceee
Q 047355 19 RVKSVDFHPTQPWVLAS-LY--SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNTMASV 94 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~-~~--dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~ 94 (312)
....++|+|++ .|+.+ +. ++.|++.|+.+++....+.....+.. ..+..+++.|+.+ -.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fg-eGi~~~g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFG-EGLTLLNEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCE-EEEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcce-EEEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence 36899999986 55544 32 58999999999988887765433221 1233335555544 46789999999999888
Q ss_pred eeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecC--Cc---cceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 95 KEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG--HS---HYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 95 ~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
.++...... ...+.++++.++++..++.+.++|..+... ...+.- .. .....+.|. ++..++....++.|
T Consensus 100 ~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 100 KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEE
T ss_pred EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcE-EEEEEECCCCcccccceeEEEE--CCEEEEecCCCCeE
Confidence 777532111 233556777676666788999999876532 333221 11 124556665 34455555568899
Q ss_pred EEEEcCCCcceeeecccc-------------cceeEEEEEEcCC-ceEEEEEeCCCeEEEEeCCC
Q 047355 170 QIWNMDSSAAKFTLDAHE-------------KGINCIDYFITSD-KVYLITGSDDFTVKVWDYET 220 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~-~~~l~sg~~dg~i~vwd~~~ 220 (312)
.+.|..+++....+.... ...+.+++ +++ .++++++...++|.+.++..
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~--~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAW--DQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEE--ETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEE--cCCCCEEEEECCCCCeEEEEEEec
Confidence 999999998777664321 13456665 444 46778888888888888754
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.78 E-value=7.2e-06 Score=74.46 Aligned_cols=256 Identities=12% Similarity=0.066 Sum_probs=145.8
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEecCC----ceeEEEEeeCCcEEEEecC------CCeEEEEEccCceeeeeec
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDS----PVRTAKFVAREHWIVCGSD------DKFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~ 98 (312)
+..++.++.|+.+..+|..+++.+-.+..... .+...-...+ ..++.++. ++.|..+|.++++.+-++.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEEC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 45778888899999999988877655543221 1111111123 45555554 7999999999887665443
Q ss_pred ccccc--------------------------------------eeEEEEecCCCEEEEEeCC----------------Cc
Q 047355 99 AHEDY--------------------------------------IRSLAVHPTFPFVLTASDD----------------KL 124 (312)
Q Consensus 99 ~h~~~--------------------------------------i~~~~~~~~~~~l~t~s~d----------------~~ 124 (312)
..... ...+++.+....+..+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 21100 0235666666666555432 25
Q ss_pred EEEEeCCCCceeeeEecC--C--------ccceEEEEeCCCCC---CEEEEEeCCCeEEEEEcCCCcceeeecccc----
Q 047355 125 IKLWDWEKNWECTQTFEG--H--------SHYVMQSAFNPKDL---NTFASASLDGTIQIWNMDSSAAKFTLDAHE---- 187 (312)
Q Consensus 125 v~iwd~~~~~~~~~~~~~--~--------~~~v~~~~~~~~~~---~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~---- 187 (312)
+..+|..+... ...++. | ..++. ....+ ++ ..++.++.+|.+.++|..+++.+.......
T Consensus 274 v~Ald~~tG~~-~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 274 IWGRDLDTGMA-KWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp EEEEETTTCCE-EEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEecCCCcE-EEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 88888776533 333321 1 12222 11111 22 256778889999999998887765442211
Q ss_pred ---------cce--------------------------eEEEEEEcCCceEEEEE-------------------------
Q 047355 188 ---------KGI--------------------------NCIDYFITSDKVYLITG------------------------- 207 (312)
Q Consensus 188 ---------~~v--------------------------~~~~~~~~~~~~~l~sg------------------------- 207 (312)
.++ ..++ .+++..++...
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a--~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 428 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDS--YDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT 428 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCE--EETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCce--ECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence 000 0011 12332223222
Q ss_pred ------------eCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccc
Q 047355 208 ------------SDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER 275 (312)
Q Consensus 208 ------------~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~ 275 (312)
..+|.|..||..+++.+-.+.. ...+.+..+...+..++.++.|+.|+.||.++++.+.++......
T Consensus 429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 507 (571)
T 2ad6_A 429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG 507 (571)
T ss_dssp EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ceeccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc
Confidence 1357899999999988766642 223333333334566778999999999999999988776644221
Q ss_pred -eEEEEEecCCCeEEEE
Q 047355 276 -VWSIGYKKGSNQVAFG 291 (312)
Q Consensus 276 -v~~~~~~~~~~~l~~~ 291 (312)
..-+.|..+|++++..
T Consensus 508 ~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 508 IGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred EeeeEEEEECCEEEEEE
Confidence 1122345666655533
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.76 E-value=6.9e-06 Score=74.58 Aligned_cols=266 Identities=17% Similarity=0.081 Sum_probs=153.9
Q ss_pred CCeEEEEec-CCeEEEEec-cCCceeeeEEecCCc----------e-eEEEEeeCCcEEEEecCCCeEEEEEccCceeee
Q 047355 29 QPWVLASLY-SGTVCIWNY-HSQTTEKSVKVTDSP----------V-RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVK 95 (312)
Q Consensus 29 ~~~l~~~~~-dg~v~iw~~-~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 95 (312)
+..++.++. ++.|.-+|. .+++.+-.+...... + ..... .+..++.++.|+.+..+|..+++.+-
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 446666777 888999998 787776554432210 0 11222 35678888899999999999887665
Q ss_pred eecccc----cceeE-EEEecCCCEEEEEeC------CCcEEEEeCCCCceeeeEecCCccc------------------
Q 047355 96 EFEAHE----DYIRS-LAVHPTFPFVLTASD------DKLIKLWDWEKNWECTQTFEGHSHY------------------ 146 (312)
Q Consensus 96 ~~~~h~----~~i~~-~~~~~~~~~l~t~s~------d~~v~iwd~~~~~~~~~~~~~~~~~------------------ 146 (312)
.+.... ..+.+ -.+. ++ .++.++. ++.+..+|..+.... ..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~-W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELK-WRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEE-EEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEE-EEEccCCCccccccCcccccccccccc
Confidence 443211 12221 1111 33 4555544 789999998766432 222211000
Q ss_pred --------------------eEEEEeCCCCCCEEEEEeCC----------------CeEEEEEcCCCcceeeecc--ccc
Q 047355 147 --------------------VMQSAFNPKDLNTFASASLD----------------GTIQIWNMDSSAAKFTLDA--HEK 188 (312)
Q Consensus 147 --------------------v~~~~~~~~~~~~~~s~s~d----------------g~v~iwd~~~~~~~~~~~~--~~~ 188 (312)
.....+.+.. ..++.++.+ +.|..+|.++++.+..++. |..
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCC-CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence 0112344432 455555432 3699999999888766543 211
Q ss_pred ----ceeEEE-EEEcCCc---eEEEEEeCCCeEEEEeCCCCeEEEEecccc-------------cCe-------------
Q 047355 189 ----GINCID-YFITSDK---VYLITGSDDFTVKVWDYETKTCVQILEGHT-------------NNV------------- 234 (312)
Q Consensus 189 ----~v~~~~-~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-------------~~i------------- 234 (312)
.+.... .....+| ..++.++.+|.+.++|.++++.+...+... .++
T Consensus 296 ~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 375 (571)
T 2ad6_A 296 WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKG 375 (571)
T ss_dssp SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCE
T ss_pred cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCc
Confidence 111111 1112355 357788899999999999998876543211 111
Q ss_pred -------------EEEEEeCCCcEEEEEe-------------------------------------CCCcEEEEeCCCcc
Q 047355 235 -------------TAVCFHPELRIIITAS-------------------------------------EDGTILIWNATTFR 264 (312)
Q Consensus 235 -------------~~l~~~~~~~~l~s~s-------------------------------------~dg~v~iwd~~~~~ 264 (312)
..++|+|+..+++... .+|.|..||..+++
T Consensus 376 ~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~ 455 (571)
T 2ad6_A 376 TNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK 455 (571)
T ss_dssp EEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC
T ss_pred eEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC
Confidence 2467888877766653 35789999999988
Q ss_pred eeeecccCccceEEEEEecCCCeEEEEecCCeEEEEe
Q 047355 265 LQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKI 301 (312)
Q Consensus 265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~ 301 (312)
.+.+..... .+++......+..+.+++.+|.+++.-
T Consensus 456 ~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 456 AKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp EEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred EEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEE
Confidence 776654321 222223334556677777788777554
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.76 E-value=5.3e-05 Score=62.96 Aligned_cols=224 Identities=8% Similarity=0.009 Sum_probs=130.5
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCC--cEEEEeCCCCceeee
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDK--LIKLWDWEKNWECTQ 138 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~--~v~iwd~~~~~~~~~ 138 (312)
....+++.+++..+++-..++.|..||.+.. ....+. .......+++.++++++++..... .+..+|...... ..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~-~~ 109 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV-ET 109 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-EE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-EE
Confidence 3456788888886666667889999987753 222222 234578899999998666554322 355566544321 11
Q ss_pred Eec-CCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc-eeeec---------ccccceeEEEEEEcCCc-eEEEE
Q 047355 139 TFE-GHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA-KFTLD---------AHEKGINCIDYFITSDK-VYLIT 206 (312)
Q Consensus 139 ~~~-~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~-~~~~~---------~~~~~v~~~~~~~~~~~-~~l~s 206 (312)
... ............+ +...+++-..++.|..+|..+... ..... ......+.+ ++++ .++++
T Consensus 110 ~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi----s~dg~~lyv~ 184 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL----KRFGNFLYVS 184 (306)
T ss_dssp EEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE----EEETTEEEEE
T ss_pred EEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc----CcCCCEEEEE
Confidence 111 1112222333333 333455555688899999765321 11000 011112223 3344 45666
Q ss_pred EeCCCeEEEEeCCC-CeE--EEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCccee--eecccCccceEEEEE
Q 047355 207 GSDDFTVKVWDYET-KTC--VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ--NTLSSGLERVWSIGY 281 (312)
Q Consensus 207 g~~dg~i~vwd~~~-~~~--~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~--~~~~~~~~~v~~~~~ 281 (312)
-...+.|..|+... ++. ...+.. ......++++++++++++....+.|.+++.. +++. ..+......+.+++|
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEE
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEE
Confidence 67788999999864 321 111111 1345678999999887777778899999965 5542 234444567899999
Q ss_pred e---cCCCeEEEEecC
Q 047355 282 K---KGSNQVAFGCDN 294 (312)
Q Consensus 282 ~---~~~~~l~~~~~~ 294 (312)
. |+++.|..++..
T Consensus 263 ~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 263 GQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CCSTTTTTEEEEEECT
T ss_pred ecccCCCCEEEEECCC
Confidence 8 888777766543
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.71 E-value=2e-05 Score=63.19 Aligned_cols=179 Identities=10% Similarity=0.106 Sum_probs=115.4
Q ss_pred eeEEEEeeCCcEEEEecCCC--eEEEEEccCceeeeeecccccc-eeEEEEecCCCEEE-EEeCCCcEEEEeCCCCceee
Q 047355 62 VRTAKFVAREHWIVCGSDDK--FIRVFDYNTMASVKEFEAHEDY-IRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECT 137 (312)
Q Consensus 62 v~~~~~~~~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~h~~~-i~~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~ 137 (312)
...+.|. ++.+..+.+.+| .|+.+|+++++....+...... -..+++. +..|. ..-.++.+.++|..+. +..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~-~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNL-RQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTC-CEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccC-cEE
Confidence 3566777 666566666655 8999999999887776543321 1234443 44444 4455889999998765 334
Q ss_pred eEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc-----cceeEEEEEEcCCceEEEEEeCCCe
Q 047355 138 QTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE-----KGINCIDYFITSDKVYLITGSDDFT 212 (312)
Q Consensus 138 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~sg~~dg~ 212 (312)
.++.-... -..+.+ .+ ..++.+..+++|.++|..+.+....+.... ..++.+.+. +|...+..-.+..
T Consensus 121 ~ti~~~~e-G~glt~--dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~---~G~lyan~w~~~~ 193 (262)
T 3nol_A 121 RSFNYDGE-GWGLTH--ND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV---DGEIFANVWQTNK 193 (262)
T ss_dssp EEEECSSC-CCCEEE--CS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSE
T ss_pred EEEECCCC-ceEEec--CC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE---CCEEEEEEccCCe
Confidence 44432221 122333 23 444444457889999999887776654422 223455543 5776666667889
Q ss_pred EEEEeCCCCeEEEEeccc------------ccCeEEEEEeCCCcEEEEEeC
Q 047355 213 VKVWDYETKTCVQILEGH------------TNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 213 i~vwd~~~~~~~~~~~~h------------~~~i~~l~~~~~~~~l~s~s~ 251 (312)
|.+.|.++++.+..+... ....+.|||+|+++.|+..+.
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999999998877532 124689999998887777774
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.71 E-value=1.2e-05 Score=73.14 Aligned_cols=252 Identities=14% Similarity=0.109 Sum_probs=141.8
Q ss_pred EEEEecCCeEEEEeccCCceeeeEEecCC----ceeEEEEeeCCcEEEEec------CCCeEEEEEccCceeeeeecccc
Q 047355 32 VLASLYSGTVCIWNYHSQTTEKSVKVTDS----PVRTAKFVAREHWIVCGS------DDKFIRVFDYNTMASVKEFEAHE 101 (312)
Q Consensus 32 l~~~~~dg~v~iw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~g~------~dg~i~iwd~~~~~~~~~~~~h~ 101 (312)
|+.++.|+.+.-+|..+++.+-....... .+.+.-...++ .++.++ .+|.|+.+|.++++.+-.+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 88888999999999988877655443220 11111111234 555555 38999999999987654443211
Q ss_pred cc-------------------------------------e-eEEEEecCCCEEEEEeCC----------------CcEEE
Q 047355 102 DY-------------------------------------I-RSLAVHPTFPFVLTASDD----------------KLIKL 127 (312)
Q Consensus 102 ~~-------------------------------------i-~~~~~~~~~~~l~t~s~d----------------~~v~i 127 (312)
.. + ..+++.+....+..+..+ +.+.-
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 00 0 134566677777766654 36788
Q ss_pred EeCCCCceeeeEecC--C--------ccceEEEEeCCCCC---CEEEEEeCCCeEEEEEcCCCcceeeecccc-------
Q 047355 128 WDWEKNWECTQTFEG--H--------SHYVMQSAFNPKDL---NTFASASLDGTIQIWNMDSSAAKFTLDAHE------- 187 (312)
Q Consensus 128 wd~~~~~~~~~~~~~--~--------~~~v~~~~~~~~~~---~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~------- 187 (312)
+|..+... ...++. | ..++. ......++ ..++.++.+|.+.++|.++++.+.......
T Consensus 283 ld~~TG~~-~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 283 RDADTGEA-KFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EETTTCCE-EEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EeCCCCce-eeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 88776533 333322 1 11222 11110123 457778899999999999887765432110
Q ss_pred ------cce--------------------------eEEEEEEcCCceEEE------------------------------
Q 047355 188 ------KGI--------------------------NCIDYFITSDKVYLI------------------------------ 205 (312)
Q Consensus 188 ------~~v--------------------------~~~~~~~~~~~~~l~------------------------------ 205 (312)
.++ ..+++ +|+..++.
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~--dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSY--DPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEE--ETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccC--CCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 000 00011 11111111
Q ss_pred -E--Ee------CCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccc-
Q 047355 206 -T--GS------DDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLER- 275 (312)
Q Consensus 206 -s--g~------~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~- 275 (312)
. .+ .+|.|..||..+++.+-.... ..+..+-.+...+.+++.++.|+.++.||.++++.+.++......
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~ 517 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI 517 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE
Confidence 1 01 357899999999987765531 222221122335567778999999999999999988776543211
Q ss_pred eEEEEEecCCCeEE
Q 047355 276 VWSIGYKKGSNQVA 289 (312)
Q Consensus 276 v~~~~~~~~~~~l~ 289 (312)
..-+.|..+|++.+
T Consensus 518 ~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 518 GYPMTYTHKGTQYV 531 (599)
T ss_dssp SCCEEEEETTEEEE
T ss_pred eccEEEEeCCEEEE
Confidence 11234456776544
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.70 E-value=2.1e-05 Score=71.57 Aligned_cols=195 Identities=14% Similarity=0.016 Sum_probs=113.7
Q ss_pred CCeEEEEec-CCeEEEEec-cCCceeeeEEecCCc-----------eeEEEEeeCCcE----EEEecCCCeEEEEEccCc
Q 047355 29 QPWVLASLY-SGTVCIWNY-HSQTTEKSVKVTDSP-----------VRTAKFVAREHW----IVCGSDDKFIRVFDYNTM 91 (312)
Q Consensus 29 ~~~l~~~~~-dg~v~iw~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~g~~dg~i~iwd~~~~ 91 (312)
+..|++++. ++.|.-+|. .+++.+-.+...... ...+.+.+.+.. |+.++.|+.|..+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456677776 888999998 787776555432210 122344333334 888899999999999998
Q ss_pred eeeeeecccc----cceeE-EEEecCCCEEEEEe------CCCcEEEEeCCCCceeeeEecCCccc--------------
Q 047355 92 ASVKEFEAHE----DYIRS-LAVHPTFPFVLTAS------DDKLIKLWDWEKNWECTQTFEGHSHY-------------- 146 (312)
Q Consensus 92 ~~~~~~~~h~----~~i~~-~~~~~~~~~l~t~s------~d~~v~iwd~~~~~~~~~~~~~~~~~-------------- 146 (312)
+.+-+..... ..+.+ -.+. ++ .++.++ .++.|.-+|..+.... ..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~-W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQV-WRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEE-EEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEE-EEEcCCCCccccccccccccccc
Confidence 7654443221 12221 1111 33 455444 3789999998776432 222211100
Q ss_pred -----------------------e-EEEEeCCCCCCEEEEEeCC----------------CeEEEEEcCCCcceeeeccc
Q 047355 147 -----------------------V-MQSAFNPKDLNTFASASLD----------------GTIQIWNMDSSAAKFTLDAH 186 (312)
Q Consensus 147 -----------------------v-~~~~~~~~~~~~~~s~s~d----------------g~v~iwd~~~~~~~~~~~~~ 186 (312)
+ ....+.+. .++++.++.+ ++|..+|.++++.+..++..
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~-~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPG-TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETT-TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred cccccccccccCCCcceecCCCccccceeEeCC-CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 0 01223343 3566666554 37999999999887665432
Q ss_pred cc---------ceeEEEEEEcCCc---eEEEEEeCCCeEEEEeCCCCeEEEEec
Q 047355 187 EK---------GINCIDYFITSDK---VYLITGSDDFTVKVWDYETKTCVQILE 228 (312)
Q Consensus 187 ~~---------~v~~~~~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~ 228 (312)
.. .....+. ...++ ..++.++.+|.+.++|.++++.+....
T Consensus 298 ~~d~wd~d~~~~p~l~d~-~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 298 PHDEWDYAGVNVMMLSEQ-KDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TTCSSCCCCCCCCEEEEE-ECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCccccccCCCccEEEec-cccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 11 0111111 11456 567788999999999999998876543
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.68 E-value=3.8e-05 Score=61.67 Aligned_cols=176 Identities=13% Similarity=0.062 Sum_probs=115.2
Q ss_pred eEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccce--eEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEe
Q 047355 63 RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYI--RSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTF 140 (312)
Q Consensus 63 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i--~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~ 140 (312)
..+.|. ++.+..+.+.+|.|+.+|+++++....+ -. ... ..+++.. +++.+..-.++.+.+||..+. +...++
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl-~~~~ti 132 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPP-QRERTT 132 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTT-EEEEEE
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcC-cEEEEE
Confidence 566665 4566667788899999999999877766 22 223 3355543 234445556889999998765 444444
Q ss_pred cCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc--c---ceeEEEEEEcCCceEEEEEeCCCeEEE
Q 047355 141 EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE--K---GINCIDYFITSDKVYLITGSDDFTVKV 215 (312)
Q Consensus 141 ~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~--~---~v~~~~~~~~~~~~~l~sg~~dg~i~v 215 (312)
..... -..+.+. +..|+.+..+++|.++|..+.+....+.... . .++.+.+. +|...+..-.+..|.+
T Consensus 133 ~~~~e-GwGLt~D---g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~---dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 133 RYSGE-GWGLCYW---NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA---NGVIYANIWHSSDVLE 205 (268)
T ss_dssp ECSSC-CCCEEEE---TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE---TTEEEEEETTCSEEEE
T ss_pred eCCCc-eeEEecC---CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe---CCEEEEEECCCCeEEE
Confidence 32221 1233332 3455555568899999999887776654422 2 23455543 6666666667889999
Q ss_pred EeCCCCeEEEEeccc-------------ccCeEEEEEeCCCcEEEEEe
Q 047355 216 WDYETKTCVQILEGH-------------TNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 216 wd~~~~~~~~~~~~h-------------~~~i~~l~~~~~~~~l~s~s 250 (312)
.|.++++.+..+... .+-.+.|||+|+++.|+..+
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999988876532 13568999999876666555
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.68 E-value=5.6e-05 Score=68.73 Aligned_cols=80 Identities=15% Similarity=0.077 Sum_probs=52.9
Q ss_pred CCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccce-EEEEEecCCCeE
Q 047355 210 DFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSGLERV-WSIGYKKGSNQV 288 (312)
Q Consensus 210 dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l 288 (312)
+|.|..||..+++.+-....+ .++..-.....+.+++.|+.|+.++.||.++++.+.++....... .-+.|..+|++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 688999999999877655432 222222222345678889999999999999999887766542211 124456777765
Q ss_pred EE
Q 047355 289 AF 290 (312)
Q Consensus 289 ~~ 290 (312)
++
T Consensus 544 v~ 545 (582)
T 1flg_A 544 LG 545 (582)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=0.00012 Score=64.05 Aligned_cols=240 Identities=9% Similarity=0.069 Sum_probs=137.9
Q ss_pred cEEEEEEcC-CCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC-C----eEEEEEccCce
Q 047355 19 RVKSVDFHP-TQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD-K----FIRVFDYNTMA 92 (312)
Q Consensus 19 ~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-g----~i~iwd~~~~~ 92 (312)
....|+++| ++..|+.+...+.|+.+|++...... +......-..+++.+++++|+.+... + .+..++.+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457899998 56677777666889999987655433 33333446688999999977666542 1 33334432211
Q ss_pred e-eeeecccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 93 S-VKEFEAHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 93 ~-~~~~~~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
. ...+.. ......++++| ++.++++-..++.|..++............+.......++++|.+..++++-...+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 112221 23356788999 66666666667889999976543211111112234567889986533666667788999
Q ss_pred EEEcCCCc--c--eeeeccc------c---------ccee-EEEEEE------cCCceEEEEEeCCCeEEEEeCCCCeEE
Q 047355 171 IWNMDSSA--A--KFTLDAH------E---------KGIN-CIDYFI------TSDKVYLITGSDDFTVKVWDYETKTCV 224 (312)
Q Consensus 171 iwd~~~~~--~--~~~~~~~------~---------~~v~-~~~~~~------~~~~~~l~sg~~dg~i~vwd~~~~~~~ 224 (312)
.++.+... . ...+.+. . .... .+.... .+++.++++-...+.|+.++. .+...
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE
Confidence 98876421 1 1111110 0 0011 121110 245677777777788998884 45443
Q ss_pred EEecc----c-------------ccCeEEEEEeC-CCcEEEEEeCCCcEEEEeCC
Q 047355 225 QILEG----H-------------TNNVTAVCFHP-ELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 225 ~~~~~----h-------------~~~i~~l~~~~-~~~~l~s~s~dg~v~iwd~~ 261 (312)
..... . -...+.|+++| ++.++++-....+|+.++.+
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 32211 0 11478899998 46666666666778877653
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=0.00038 Score=65.69 Aligned_cols=269 Identities=11% Similarity=0.068 Sum_probs=159.1
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEE----------ecCCceeEEEEeeCCcEEEEecCCCeEEEE
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK----------VTDSPVRTAKFVAREHWIVCGSDDKFIRVF 86 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~g~~dg~i~iw 86 (312)
...|.++..+++|. |..|..++-|..++....... .+. .....|.++...+++. |..|+.++-|..|
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVF 388 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEE
Confidence 45799999998875 677888888899987654322 121 1224566666655554 5566655668888
Q ss_pred EccCceeeeee---cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec---CCccceEEEEeCCCCCCEE
Q 047355 87 DYNTMASVKEF---EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE---GHSHYVMQSAFNPKDLNTF 160 (312)
Q Consensus 87 d~~~~~~~~~~---~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~ 160 (312)
+..+....... ......|.++...+++.+.+ |+.++.+..+|..+.. ...+. .....+..+...+. ..+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~--g~l 463 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKN--KKI 463 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTT--SEE
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCC--CCE
Confidence 87654322111 12345688998887777555 6666678888865431 12221 12345666666653 345
Q ss_pred EEEeCCCeEEEEEcCCCcceeeeccc-----ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc---ccc
Q 047355 161 ASASLDGTIQIWNMDSSAAKFTLDAH-----EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG---HTN 232 (312)
Q Consensus 161 ~s~s~dg~v~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~ 232 (312)
..++. +-|..||..+.+........ ...+.++. ..+++.+. .|+..+-|..||..+.+....... ...
T Consensus 464 wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~--~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~l~~~ 539 (781)
T 3v9f_A 464 WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA--QDSEGRFW-IGTFGGGVGIYTPDMQLVRKFNQYEGFCSN 539 (781)
T ss_dssp EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE--ECTTCCEE-EEESSSCEEEECTTCCEEEEECTTTTCSCS
T ss_pred EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEE--EcCCCCEE-EEEcCCCEEEEeCCCCeEEEccCCCCCCCC
Confidence 55666 56889998765443322111 23455553 45666644 455534488899876654433221 134
Q ss_pred CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee-ccc--CccceEEEEEecCCCeEEEEecCCeEEE
Q 047355 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT-LSS--GLERVWSIGYKKGSNQVAFGCDNGTLIV 299 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~~--~~~~v~~~~~~~~~~~l~~~~~~g~i~v 299 (312)
.|.++...+++.+.++. .+|.|..||..+.+...- ... ....+.++...++|+..++ +.+|..++
T Consensus 540 ~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~Gl~~~ 607 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS-TNTGISCY 607 (781)
T ss_dssp CEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE-CSSCEEEE
T ss_pred eeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEE-cCCceEEE
Confidence 68999998888855544 466658888776543221 111 1235778877777765554 46665544
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=0.00024 Score=67.06 Aligned_cols=268 Identities=10% Similarity=0.030 Sum_probs=157.5
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEE-------ecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK-------VTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT 90 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~ 90 (312)
..|.++..++++...+ |..+ .+.+||..+.+...... .....|.++...+++. |..|+..+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 5689999888876444 4555 68889876554322111 1234577776666554 55566645578888766
Q ss_pred ceeeeee--------------cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec----------CCccc
Q 047355 91 MASVKEF--------------EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE----------GHSHY 146 (312)
Q Consensus 91 ~~~~~~~--------------~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~----------~~~~~ 146 (312)
....... ......|.++...+++.+- .|+.++-|..++..... ...+. .....
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWGGGINFISNAPPT--FHTWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCS--CEEEC----CCCSSCCSSSC
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCc--ceeeccCccccccCCCCCcc
Confidence 4322111 1124568899888887754 46666778888865431 11111 12245
Q ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeee---cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeE
Q 047355 147 VMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL---DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTC 223 (312)
Q Consensus 147 v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 223 (312)
|.++...+. ..+..|+.++-|..||..+....... ......|.++. ..+++.+ ..|+.++-|..+|..+++.
T Consensus 365 v~~i~~d~~--g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~--~d~~g~l-Wigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 365 VSSVCDDGQ--GKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL--KDSEGNL-WFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp EEEEEECTT--SCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE--ECTTSCE-EEEETTEEEEEECSSSCEE
T ss_pred eEEEEEcCC--CCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE--ECCCCCE-EEEeccCCEEEEcCCCCcE
Confidence 666766653 34667776777899997654322111 11123455553 3555654 4466667799999877765
Q ss_pred EEEec--ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecccC-----ccceEEEEEecCCCeEEEEecCCe
Q 047355 224 VQILE--GHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLSSG-----LERVWSIGYKKGSNQVAFGCDNGT 296 (312)
Q Consensus 224 ~~~~~--~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~g~ 296 (312)
..... .....|.++...+++.+.+ |+. +-|..+|..+.+........ ...+.++...++|+..+....+|.
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl 517 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGV 517 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCE
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCE
Confidence 44322 1345799999888877554 444 56888998775543322111 356889988888887765554665
Q ss_pred EE
Q 047355 297 LI 298 (312)
Q Consensus 297 i~ 298 (312)
.+
T Consensus 518 ~~ 519 (781)
T 3v9f_A 518 GI 519 (781)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.59 E-value=0.00012 Score=66.54 Aligned_cols=196 Identities=11% Similarity=-0.019 Sum_probs=111.2
Q ss_pred CCeEEEEecCCeEEEEeccCCceeeeEEecCCce---------eEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecc
Q 047355 29 QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPV---------RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEA 99 (312)
Q Consensus 29 ~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 99 (312)
+..+++++.++.|.-+|..+++.+-.+....... ..... .+..++.++.|+.|..+|.++++.+-.+..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 3456666664558888988887765554432110 11122 356788888999999999999886654432
Q ss_pred ccc----ceeE-EEEecC---CC-EEEEEe------CCCcEEEEeCCCCceeeeEecCCccc------------------
Q 047355 100 HED----YIRS-LAVHPT---FP-FVLTAS------DDKLIKLWDWEKNWECTQTFEGHSHY------------------ 146 (312)
Q Consensus 100 h~~----~i~~-~~~~~~---~~-~l~t~s------~d~~v~iwd~~~~~~~~~~~~~~~~~------------------ 146 (312)
... .+.+ -.+..+ ++ .+++++ .++.+.-+|..+....- ........
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W-~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW-MRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE-EEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe-ecCCCccccccccCcccccccccccc
Confidence 210 1211 111111 22 455554 37889999987653322 21110000
Q ss_pred -----------------------eEEEEeCCCCCCEEEEEeC--------------------C----CeEEEEEcCCCcc
Q 047355 147 -----------------------VMQSAFNPKDLNTFASASL--------------------D----GTIQIWNMDSSAA 179 (312)
Q Consensus 147 -----------------------v~~~~~~~~~~~~~~s~s~--------------------d----g~v~iwd~~~~~~ 179 (312)
-...+++|. .++++.++. | +.|..+|.++++.
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~-~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAE-TNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETT-TTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred cCCCccccccccccccccCCccccCCceEcCC-CCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 001233443 345555542 2 5899999999988
Q ss_pred eeeecc--ccc----ceeEEEEE-Ec-CCc---eEEEEEeCCCeEEEEeCCCCeEEEEec
Q 047355 180 KFTLDA--HEK----GINCIDYF-IT-SDK---VYLITGSDDFTVKVWDYETKTCVQILE 228 (312)
Q Consensus 180 ~~~~~~--~~~----~v~~~~~~-~~-~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~ 228 (312)
+..++. |.. .+....+. .. .+| ..++.++.+|.++++|.++++.+..+.
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 876543 321 11111111 11 355 478889999999999999998876543
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.59 E-value=0.00018 Score=60.09 Aligned_cols=245 Identities=11% Similarity=-0.024 Sum_probs=142.9
Q ss_pred eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEe-cCCCeEEEEEccC----ceeeeeeccccccee
Q 047355 31 WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNT----MASVKEFEAHEDYIR 105 (312)
Q Consensus 31 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~----~~~~~~~~~h~~~i~ 105 (312)
+|+.+.. ..|+..+++..+....+. .......+.|.++++.|+.+ ...+.|..+++++ ......+...-....
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 4444433 568888888765444333 23345688898866655544 4568999999876 222222222223457
Q ss_pred EEEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC-CeEEEEEcCCCcceeee
Q 047355 106 SLAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD-GTIQIWNMDSSAAKFTL 183 (312)
Q Consensus 106 ~~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-g~v~iwd~~~~~~~~~~ 183 (312)
.+++.+.+..| ++-...+.|.+.|...... .............++.+|.++.++++.... +.|...+++........
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~ 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE
Confidence 89998755544 4556678899999764322 112222234456778888665566665444 78888888654332222
Q ss_pred cccccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEecc--cccCeEEEEEeCCCcEEEEEeCCCcEEEEeC
Q 047355 184 DAHEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEG--HTNNVTAVCFHPELRIIITASEDGTILIWNA 260 (312)
Q Consensus 184 ~~~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~ 260 (312)
...-...+.+++ ++ ++.++++-+..+.|..+|............ ......++++. .+.++.+-...+.|..++.
T Consensus 160 ~~~~~~P~gla~--d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 160 TENIQWPNGITL--DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp CSSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred ECCCCCceEEEE--eccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 222233455554 43 456666777788999999874332222221 22346788885 4566777777789999998
Q ss_pred CCcceeeecccCccceEEEEE
Q 047355 261 TTFRLQNTLSSGLERVWSIGY 281 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~~~~ 281 (312)
.+++....+.......+.++.
T Consensus 237 ~~g~~~~~i~~~~~~p~~i~v 257 (316)
T 1ijq_A 237 LTGSDVNLLAENLLSPEDMVL 257 (316)
T ss_dssp TTCCCCEEEECSCSCCCCEEE
T ss_pred CCCcceEEEecCCCCceEEEE
Confidence 777665555444444444443
No 267
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.56 E-value=1e-05 Score=72.38 Aligned_cols=208 Identities=13% Similarity=0.051 Sum_probs=126.6
Q ss_pred CCcEEEEec-CCCeEEEEEccCceeeeeeccc-ccceeEEEE-e-cCCCEEEEEe------------------CCCcEEE
Q 047355 70 REHWIVCGS-DDKFIRVFDYNTMASVKEFEAH-EDYIRSLAV-H-PTFPFVLTAS------------------DDKLIKL 127 (312)
Q Consensus 70 ~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h-~~~i~~~~~-~-~~~~~l~t~s------------------~d~~v~i 127 (312)
|+++++... .++.|.+.|+++++..+.++-. ......+++ . |+++++..++ .++.+-+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 778877655 4568999999999887755322 234778887 4 8999988774 2456777
Q ss_pred EeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCC---------------eEEEEEcCCCcceeeecccccceeE
Q 047355 128 WDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG---------------TIQIWNMDSSAAKFTLDAHEKGINC 192 (312)
Q Consensus 128 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg---------------~v~iwd~~~~~~~~~~~~~~~~v~~ 192 (312)
.|..+.....+...+. + .-.+.++|. +.++++.+.+. .|.+.|......
T Consensus 180 ID~~t~~v~~qI~Vgg-~-pd~~~~spd-Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~------------- 243 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-N-LDNCDADYE-GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK------------- 243 (595)
T ss_dssp EETTTTEEEEEEEESS-C-CCCEEECSS-SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH-------------
T ss_pred EECCCCeEEEEEEeCC-C-ccceEECCC-CCEEEEEecCcccCcchhhccccccceEEEeeccceeE-------------
Confidence 7776542222211111 1 123456664 45555555443 133333211100
Q ss_pred EEEEEcCCceEEEEEeCCCeEEEEeCCC--CeE-EEEecccccCeEEEEEeCCCcEEEEEe-CCCcEEEEeCCCcc----
Q 047355 193 IDYFITSDKVYLITGSDDFTVKVWDYET--KTC-VQILEGHTNNVTAVCFHPELRIIITAS-EDGTILIWNATTFR---- 264 (312)
Q Consensus 193 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~--~~~-~~~~~~h~~~i~~l~~~~~~~~l~s~s-~dg~v~iwd~~~~~---- 264 (312)
..++|.+... +.|.|.|.++ ++. +..+.. .....++.++|||++++.++ .+.+|.++|+.+.+
T Consensus 244 ----~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~ 314 (595)
T 1fwx_A 244 ----AIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY 314 (595)
T ss_dssp ----HHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH
T ss_pred ----eccCCCeeEE----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccc
Confidence 0112222211 4599999987 544 444442 34567999999999766555 67899999998653
Q ss_pred --------eeeecccCccceEEEEEecCCCeEEEEecCCeEEEEecc
Q 047355 265 --------LQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 265 --------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~ 303 (312)
...++ ......+.++|+|+|....+..-++++.+|--+
T Consensus 315 ~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 315 ENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp SCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred cccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 22222 223568999999999655666678888887643
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=0.00028 Score=61.02 Aligned_cols=219 Identities=11% Similarity=-0.014 Sum_probs=130.2
Q ss_pred cCcEEEEEEcCCCCeEEEE-ecCCeEEEEeccCCc----eeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccC
Q 047355 17 SDRVKSVDFHPTQPWVLAS-LYSGTVCIWNYHSQT----TEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNT 90 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~-~~dg~v~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~ 90 (312)
...+.+++|++.+..|+-+ ...+.|+.++++... ....+.........+++.+.+..|+ +-...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4578899999876666655 456889888886521 2222222223456777877444444 545678899998876
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
......+...-.....+++.|.+..|..... .+.|...++..... .......-.....++++|.+..++++-+..+.
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 5433333333345688999997766665543 36788888764322 11222233456778888866666666677889
Q ss_pred EEEEEcCCCcceeeeccc--ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEE
Q 047355 169 IQIWNMDSSAAKFTLDAH--EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239 (312)
Q Consensus 169 v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~ 239 (312)
|..+|++........... ......+++ . .+.++.+....+.|..+|..+++.+..+.........+..
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAV--F-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEE--E-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEE--e-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 999999765443333221 122233432 3 3456667777788888887666655555433334455544
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.54 E-value=0.00017 Score=60.28 Aligned_cols=231 Identities=8% Similarity=0.024 Sum_probs=131.7
Q ss_pred eEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec--------------------ccccceeEEEEec-CCCEEEEEeC
Q 047355 63 RTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE--------------------AHEDYIRSLAVHP-TFPFVLTASD 121 (312)
Q Consensus 63 ~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~--------------------~h~~~i~~~~~~~-~~~~l~t~s~ 121 (312)
..+++.+++..++++..++.|..|+..+... ..+. ........+++.+ ++. |..+..
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~ 99 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDC 99 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEET
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEEC
Confidence 4566777887788888889999998776432 2221 0113467899997 555 444544
Q ss_pred CCcEEEEeCCCCce-eee-EecC-CccceEEEEeCCCCCCEEEEEeC-----------------CCeEEEEEcCCCccee
Q 047355 122 DKLIKLWDWEKNWE-CTQ-TFEG-HSHYVMQSAFNPKDLNTFASASL-----------------DGTIQIWNMDSSAAKF 181 (312)
Q Consensus 122 d~~v~iwd~~~~~~-~~~-~~~~-~~~~v~~~~~~~~~~~~~~s~s~-----------------dg~v~iwd~~~~~~~~ 181 (312)
.+.+..+|...... ... ...+ .......+.+.+.++.+.++-.. ++.|..||..+.+...
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 45588888653211 111 1111 11235667777723355554322 3678888876554322
Q ss_pred eecccccceeEEEEEEcCCce-EEEEEeCCCeEEEEeCCCC---eEEEEecccccCeEEEEEeCCCcEEEEEeC------
Q 047355 182 TLDAHEKGINCIDYFITSDKV-YLITGSDDFTVKVWDYETK---TCVQILEGHTNNVTAVCFHPELRIIITASE------ 251 (312)
Q Consensus 182 ~~~~~~~~v~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~------ 251 (312)
.... ....+.++ +++++. ++++-..++.|.+|+.... ... .+....+ ...+++.+++.+.++...
T Consensus 180 ~~~~-~~~p~gia--~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~-~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 180 LLKE-LHVPGGAE--VSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE-VLVKIPN-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEE-ESCCCEEE--ECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE-EEEECSS-EEEEEECTTSCEEEEEEEETTSST
T ss_pred eccC-CccCcceE--ECCCCCEEEEEeCCCCeEEEEECCCCcCCccc-eEEeCCC-CCCeEECCCCCEEEEecCcccccc
Confidence 2111 11223343 567776 4455566789999998642 211 1111223 788999999987666544
Q ss_pred ----CCcEEEEeCCCcceeeecccC----ccceEEEEEecCCCeEEEEecCCeEEEEec
Q 047355 252 ----DGTILIWNATTFRLQNTLSSG----LERVWSIGYKKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 252 ----dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~ 302 (312)
.+.|..+|.. ++....+... ...+..+.+ .++++.++...++.|.+.-.
T Consensus 255 ~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 255 HGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp TSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred cCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 4678888864 5655544433 234666666 46666666656666654433
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.51 E-value=0.00034 Score=60.17 Aligned_cols=223 Identities=11% Similarity=-0.022 Sum_probs=130.3
Q ss_pred CcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEE
Q 047355 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQ 149 (312)
Q Consensus 71 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~ 149 (312)
..+|+.+. ...|+..+++.......... ......++|++.+..|. +-...+.|..++...... .............
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~g 163 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGG 163 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEECSSCSCCCC
T ss_pred cceeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEeCCCCCccE
Confidence 34444443 35688888876544333332 34578899997666555 445577888888765422 1112222223345
Q ss_pred EEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcC-CceEEEEEeCC-CeEEEEeCCCCeEEEEe
Q 047355 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGSDD-FTVKVWDYETKTCVQIL 227 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~d-g~i~vwd~~~~~~~~~~ 227 (312)
+++.+.++.++++-...+.|.+.+++.......+.........+++ ++ ++.++++-... +.|..+++.........
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giav--dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL--HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEE--ETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEE--EcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 6666656666777777888999888765443333332233455543 44 45556665555 78999988654333333
Q ss_pred cccccCeEEEEEeCCCcEE-EEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEE
Q 047355 228 EGHTNNVTAVCFHPELRII-ITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIV 299 (312)
Q Consensus 228 ~~h~~~i~~l~~~~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v 299 (312)
...-...+.|+++|++..| ++-+..+.|..+|+........+.........+++ ..+..+.+-...+.|..
T Consensus 242 ~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~ 313 (386)
T 3v65_B 242 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINS 313 (386)
T ss_dssp CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEE
T ss_pred ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEE
Confidence 3334457899999765544 45555678999998653333333344566778888 34445555555555543
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=6.7e-05 Score=70.48 Aligned_cols=241 Identities=11% Similarity=-0.013 Sum_probs=128.7
Q ss_pred cEEEEEEc-CCCCeEEEEec-CC----eEEEEeccCC-ceee-eEEecCCceeEEEEeeCCcEEEEecCC-----CeEEE
Q 047355 19 RVKSVDFH-PTQPWVLASLY-SG----TVCIWNYHSQ-TTEK-SVKVTDSPVRTAKFVAREHWIVCGSDD-----KFIRV 85 (312)
Q Consensus 19 ~i~~~~~~-~~~~~l~~~~~-dg----~v~iw~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~i 85 (312)
.+...+|+ |||++|+.+.. +| .|+++|++++ +... .+.. ......|+++++.|+....+ ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998886543 33 4999999877 5221 1211 13456899999887766654 36788
Q ss_pred EEccCcee--eeeec-ccccceeEEEEecCCCEEEEEeC---CCcEEEEeCCCCceee--eEe-cCCccceEEEEeCCCC
Q 047355 86 FDYNTMAS--VKEFE-AHEDYIRSLAVHPTFPFVLTASD---DKLIKLWDWEKNWECT--QTF-EGHSHYVMQSAFNPKD 156 (312)
Q Consensus 86 wd~~~~~~--~~~~~-~h~~~i~~~~~~~~~~~l~t~s~---d~~v~iwd~~~~~~~~--~~~-~~~~~~v~~~~~~~~~ 156 (312)
+++.+... ...+. ........+.++|++++|+..+. ...+.++|+....... ..+ ...........|+. +
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 88876532 12222 22344667899999998875542 3457778876532111 222 22333344444433 3
Q ss_pred CCEEEEEeCC----CeEEEEEcCCCcceee-ecccccceeEEEEEEcCCceEEEEEeCCCe--EEEEeC-------CCCe
Q 047355 157 LNTFASASLD----GTIQIWNMDSSAAKFT-LDAHEKGINCIDYFITSDKVYLITGSDDFT--VKVWDY-------ETKT 222 (312)
Q Consensus 157 ~~~~~s~s~d----g~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~--i~vwd~-------~~~~ 222 (312)
..+++....+ ..|..+|+.+...... +..+...+....+.+. .+.++++...++. |.++++ .+++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence 3344444333 3577777764212122 2233332222223333 4566777777885 455564 3333
Q ss_pred EEEEeccc-ccCeEEEEE----eCCCc-EEEEEeCC---CcEEEEeCCCcc
Q 047355 223 CVQILEGH-TNNVTAVCF----HPELR-IIITASED---GTILIWNATTFR 264 (312)
Q Consensus 223 ~~~~~~~h-~~~i~~l~~----~~~~~-~l~s~s~d---g~v~iwd~~~~~ 264 (312)
....+... ...+..+.+ ++++. ++++.++. ..+..+|+.+++
T Consensus 410 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 410 GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 12222211 112333322 33544 44554443 357777776654
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.49 E-value=0.00039 Score=58.95 Aligned_cols=220 Identities=11% Similarity=-0.034 Sum_probs=129.2
Q ss_pred EEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEE-eCCCcEEEEeCCCCceeeeEecCCccceEEEE
Q 047355 73 WIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTA-SDDKLIKLWDWEKNWECTQTFEGHSHYVMQSA 151 (312)
Q Consensus 73 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~-s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~ 151 (312)
+|+.+. ...|+..+++.......... ......++|++....|... ...+.|..++....... ............++
T Consensus 46 ~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~~~~~~~p~gla 122 (349)
T 3v64_C 46 VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVVSTGLESPGGLA 122 (349)
T ss_dssp EEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSCCCEEE
T ss_pred eeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-EEEeCCCCCccEEE
Confidence 444333 34577777766544333333 2347889999876666544 45778888887654221 11222222334567
Q ss_pred eCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcC-CceEEEEEeCC-CeEEEEeCCCCeEEEEecc
Q 047355 152 FNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGSDD-FTVKVWDYETKTCVQILEG 229 (312)
Q Consensus 152 ~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~ 229 (312)
+.+.++.++++-...+.|.+.+++.......+.........+++ ++ ++.++++-... +.|..+++...........
T Consensus 123 vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iav--dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 200 (349)
T 3v64_C 123 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL--HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT 200 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEE--ETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS
T ss_pred EecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEE--ecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 77656667777777889999998765443333332233455553 44 45666666666 8899998865433332232
Q ss_pred cccCeEEEEEeCCCcEE-EEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 230 HTNNVTAVCFHPELRII-ITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 230 h~~~i~~l~~~~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
.-...+.|+++|++..| ++-...+.|..+++........+.........+++ ..+....+-...+.|.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSIN 269 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEE
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEE
Confidence 33457899999865554 45455678999998653333333344566778887 3444444444455554
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.49 E-value=0.00035 Score=58.35 Aligned_cols=207 Identities=12% Similarity=-0.004 Sum_probs=122.1
Q ss_pred cCcEEEEEEcCCCCeEEEE-ecCCeEEEEeccC----CceeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccC
Q 047355 17 SDRVKSVDFHPTQPWVLAS-LYSGTVCIWNYHS----QTTEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNT 90 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~-~~dg~v~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~ 90 (312)
......++|++.+..|+.+ ..++.|..++++. ......+.........+++.+.+..|+ +-...+.|.+.+++.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3567899999877666654 4568999999875 222222211112346778876555554 445678999999875
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeCC--CcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASDD--KLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d--~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
................++++|.+..+..+... +.|...+....... ......-.....++++|.+..++++-+..+.
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~-~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE-EEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 43322232233456889999977666555443 67877776543211 1112223455678888866666677777889
Q ss_pred EEEEEcCCCcceeeecc--cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEe
Q 047355 169 IQIWNMDSSAAKFTLDA--HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227 (312)
Q Consensus 169 v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 227 (312)
|..+|++.......... .......+++ . .+..+++....+.|..++..+++....+
T Consensus 188 I~~~d~dg~~~~~~~~~~~~~~~P~giav--~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKRLAHPFSLAV--F-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEE--E-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCceEEEeecCCccCCcEEEEE--E-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 99999975433322221 1122334443 3 3566667777788888887666544444
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.49 E-value=0.00047 Score=59.62 Aligned_cols=248 Identities=11% Similarity=-0.024 Sum_probs=149.4
Q ss_pred CeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec-CCCeEEEEEccCc----eeeeeecccccce
Q 047355 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVFDYNTM----ASVKEFEAHEDYI 104 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~----~~~~~~~~h~~~i 104 (312)
++|+.+ ....|+..+++........ ........++|.+.+..|+-.. ..+.|+.++++.. .....+.......
T Consensus 84 ~~ll~~-~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 84 AYLFFT-NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp CEEEEE-ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ceeEEe-ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 445444 4578888888766443333 2334567889998766666554 5688888888652 2222333233456
Q ss_pred eEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeC-CCeEEEEEcCCCcceee
Q 047355 105 RSLAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASL-DGTIQIWNMDSSAAKFT 182 (312)
Q Consensus 105 ~~~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~-dg~v~iwd~~~~~~~~~ 182 (312)
..+++.+.+..| .+-...+.|.+.+...... ...+...-.....++++|.++.++.+-.. .+.|...+++.......
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 789998855444 4555677898888765422 22222233345677888866555555433 47888888876544333
Q ss_pred ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc--cccCeEEEEEeCCCcEEEEEeCCCcEEEEeC
Q 047355 183 LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG--HTNNVTAVCFHPELRIIITASEDGTILIWNA 260 (312)
Q Consensus 183 ~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~ 260 (312)
+...-...+.+++.+ .++.++++-...+.|..+|+........... .-....++++. .+.++.+-...+.|..+|.
T Consensus 241 ~~~~l~~P~glavd~-~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 241 VTENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp ECSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred EECCCCceEEEEEEe-CCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 333223445565432 3456666667788999999875443333332 22345677774 4466677777789999997
Q ss_pred CCcceeeecccCccceEEEEEe
Q 047355 261 TTFRLQNTLSSGLERVWSIGYK 282 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~~~~~ 282 (312)
.+++....+.....++..+...
T Consensus 319 ~~G~~~~~i~~~~~~p~~i~v~ 340 (400)
T 3p5b_L 319 LTGSDVNLLAENLLSPEDMVLF 340 (400)
T ss_dssp SSCCCCEEEECSCSCEEEEEEE
T ss_pred CCCCceEEEecCCCCCceEEEE
Confidence 7777666666555556666543
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.47 E-value=0.00041 Score=58.00 Aligned_cols=247 Identities=13% Similarity=0.020 Sum_probs=143.5
Q ss_pred CeEEEEecCCeEEEEeccCCce-eeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccCceee-eeecccccceeE
Q 047355 30 PWVLASLYSGTVCIWNYHSQTT-EKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASV-KEFEAHEDYIRS 106 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~-~~~~~h~~~i~~ 106 (312)
++|+.+. ...|+..+++.... .............+.|.+.+..|+ +-...+.|..++.+..... ..+...-.....
T Consensus 5 p~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 5 PLLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp CEEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred cEEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 3444443 46788888876531 111111122455778887655555 4456788999988765321 122222234667
Q ss_pred EEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe-CCCeEEEEEcCCCcceeeec
Q 047355 107 LAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS-LDGTIQIWNMDSSAAKFTLD 184 (312)
Q Consensus 107 ~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s-~dg~v~iwd~~~~~~~~~~~ 184 (312)
+++.+.+..| .+-...+.|.+++....... ............++++|.++.++.+-. ..+.|...+++.........
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 8998755544 45556778999987653221 122233344567778775544555542 35788888887543332222
Q ss_pred ccccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCc
Q 047355 185 AHEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTF 263 (312)
Q Consensus 185 ~~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~ 263 (312)
..-...+.+++ ++ ++.++++-+..+.|..+|...........+......++++.. +.++.+-...+.|..++..++
T Consensus 163 ~~l~~Pnglav--d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 163 SEIYWPNGLTL--DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp SSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCccEEEE--eccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 22223455554 44 566667777788999999875433333333344567888864 456667667788999998777
Q ss_pred ceeeecccCccceEEEEE
Q 047355 264 RLQNTLSSGLERVWSIGY 281 (312)
Q Consensus 264 ~~~~~~~~~~~~v~~~~~ 281 (312)
+....+......+..++.
T Consensus 240 ~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 240 EGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp CSCEEEECCCSSCCCEEE
T ss_pred CceEEEeCCCCCCcEEEE
Confidence 665555544444445544
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.44 E-value=0.00049 Score=57.50 Aligned_cols=218 Identities=9% Similarity=-0.001 Sum_probs=121.9
Q ss_pred CCeEEEEEccCce-eeeeecccccceeEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCC
Q 047355 80 DKFIRVFDYNTMA-SVKEFEAHEDYIRSLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDL 157 (312)
Q Consensus 80 dg~i~iwd~~~~~-~~~~~~~h~~~i~~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 157 (312)
...|+..+++... ..............++|++.+..|. +-...+.|..++..............-.....+++.+.++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4678888887653 1111112223467889998655554 4455778888887654211111111112334566666566
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcC-CceEEEEEe-CCCeEEEEeCCCCeEEEEecccccCeE
Q 047355 158 NTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITS-DKVYLITGS-DDFTVKVWDYETKTCVQILEGHTNNVT 235 (312)
Q Consensus 158 ~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h~~~i~ 235 (312)
.++++-...+.|.+++++.......+.........+++ .+ .+.++.+-. ..+.|...++............-..-+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giav--dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIAL--DPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 169 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE--EGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEE--eCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCcc
Confidence 67777777889999998765443333222233455543 43 345455542 367898888864332222222234568
Q ss_pred EEEEeCCCcEEE-EEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 236 AVCFHPELRIII-TASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 236 ~l~~~~~~~~l~-s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
.|+++|++..|. +=+..+.|..+|+..................+++..+ ..+.+-...+.|...
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILAC 234 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEE
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEE
Confidence 999998655554 5455678999998643322222334566777777532 333343344554433
No 277
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.43 E-value=0.00045 Score=56.95 Aligned_cols=234 Identities=16% Similarity=0.208 Sum_probs=147.7
Q ss_pred cCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccC-ceeeeeecccc---
Q 047355 26 HPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNT-MASVKEFEAHE--- 101 (312)
Q Consensus 26 ~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~--- 101 (312)
||..+.+|--+ ..+++|+|++.....+.+...+ +|.--+|..+. .|+-.+. ..|+.|+++. ..+.+.++.|.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~-~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~ 150 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLA 150 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSS-EEEEEES-SEEEEEESSTTCCCEEEEECCGGGT
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCC-eEEEEcC-CcEEEEcccCCCCCceeeecchhcc
Confidence 78887777654 7889999999988888887765 55555665544 3443333 5799999875 34666776664
Q ss_pred -cceeEEEEecCCCEEEEEe-------CCCcEEEEeCCCCceeeeEecCCccceEEEEeCC--CCCCEEEEEeC---CCe
Q 047355 102 -DYIRSLAVHPTFPFVLTAS-------DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP--KDLNTFASASL---DGT 168 (312)
Q Consensus 102 -~~i~~~~~~~~~~~l~t~s-------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~s~s~---dg~ 168 (312)
..|.....+++.+.++..+ -.|.+.+|..++. ..+.+++|........... ....+|+-+.. .+.
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT--EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc--ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 3577778888888755332 2477888987763 4567888887665444321 11234443333 258
Q ss_pred EEEEEcCCC---cceee-------ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEE
Q 047355 169 IQIWNMDSS---AAKFT-------LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238 (312)
Q Consensus 169 v~iwd~~~~---~~~~~-------~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~ 238 (312)
+++-++... .+.+. ++.....-..++...++.-..+..-+.-|.|++||++++.++..-+--.++|-.-+
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta 308 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA 308 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEec
Confidence 999998543 11110 11111111223334455555566677889999999999999877666667776666
Q ss_pred EeCCCcEEEEEeCCCcEEEEeCCCcce
Q 047355 239 FHPELRIIITASEDGTILIWNATTFRL 265 (312)
Q Consensus 239 ~~~~~~~l~s~s~dg~v~iwd~~~~~~ 265 (312)
.+....=++.....|.|.--.+..-.+
T Consensus 309 ~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 309 PHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred ccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 655444455556778777766655443
No 278
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=0.00034 Score=55.55 Aligned_cols=180 Identities=10% Similarity=0.077 Sum_probs=114.4
Q ss_pred eeEEEEeeCCcEEEEecCC--CeEEEEEccCceeeeeecccccc-eeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeee
Q 047355 62 VRTAKFVAREHWIVCGSDD--KFIRVFDYNTMASVKEFEAHEDY-IRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQ 138 (312)
Q Consensus 62 v~~~~~~~~~~~l~~g~~d--g~i~iwd~~~~~~~~~~~~h~~~-i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~ 138 (312)
...+.|.. +....+.+.+ ..|+.+|+++++........... -..+++.. +++....-.++.+.++|..+. +...
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl-~~~~ 99 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATL-TPRA 99 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTT-EEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcC-cEEE
Confidence 44667765 5555555554 49999999999887776543321 13344442 333445566899999998765 4444
Q ss_pred EecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc-----cceeEEEEEEcCCceEEEEEeCCCeE
Q 047355 139 TFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE-----KGINCIDYFITSDKVYLITGSDDFTV 213 (312)
Q Consensus 139 ~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~sg~~dg~i 213 (312)
++...... ..+... +..++++ ..+++|.++|..+.+...+++... ..++.+.+. ++..++..-.+..|
T Consensus 100 ti~~~~~G-wglt~d--g~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~---~G~lyanvw~s~~I 172 (243)
T 3mbr_X 100 RFRYPGEG-WALTSD--DSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV---NGELLANVWLTSRI 172 (243)
T ss_dssp EEECSSCC-CEEEEC--SSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE---TTEEEEEETTTTEE
T ss_pred EEeCCCCc-eEEeeC--CCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe---CCEEEEEECCCCeE
Confidence 44432221 334432 3344444 458899999999887776665422 223455542 66666666578899
Q ss_pred EEEeCCCCeEEEEeccc-------------ccCeEEEEEeCCCcEEEEEeC
Q 047355 214 KVWDYETKTCVQILEGH-------------TNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 214 ~vwd~~~~~~~~~~~~h-------------~~~i~~l~~~~~~~~l~s~s~ 251 (312)
.+.|.++++.+..+... .+-.+.|+|+|+++.|+..+.
T Consensus 173 ~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 173 ARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 99999999988876522 124689999998777766663
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.41 E-value=0.00077 Score=58.91 Aligned_cols=238 Identities=11% Similarity=0.072 Sum_probs=134.3
Q ss_pred cEEEEEEcCC--CCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCC-----eEEEEEccCc
Q 047355 19 RVKSVDFHPT--QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDK-----FIRVFDYNTM 91 (312)
Q Consensus 19 ~i~~~~~~~~--~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg-----~i~iwd~~~~ 91 (312)
.-..++|+|+ ...|+.+...+.|+.++...++... +.........+++.++++ |+.+...+ .+...+....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4578999985 4566666555899999987665433 323334467889999998 55444321 2333332221
Q ss_pred ee-eeeecccccceeEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeeeEec-CCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 92 AS-VKEFEAHEDYIRSLAVHP-TFPFVLTASDDKLIKLWDWEKNWECTQTFE-GHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 92 ~~-~~~~~~h~~~i~~~~~~~-~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
.. ...+. .-..-..++++| ++.+.++-..++.|+.+|..........+. +.......++++|.+..++++-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 01111 123346688888 566555555677899998763322111111 112223458899865436667677889
Q ss_pred EEEEEcCC--Ccc--eeeeccc---------------ccceeEEEEEE-------cCCceEEEEEeCCCeEEEEeCCCCe
Q 047355 169 IQIWNMDS--SAA--KFTLDAH---------------EKGINCIDYFI-------TSDKVYLITGSDDFTVKVWDYETKT 222 (312)
Q Consensus 169 v~iwd~~~--~~~--~~~~~~~---------------~~~v~~~~~~~-------~~~~~~l~sg~~dg~i~vwd~~~~~ 222 (312)
|+.++.+. ... ...+.+. -.....+++.. ..++.++++-...+.|+.++. ++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 99988763 211 1111111 01122343211 567777788778889999985 454
Q ss_pred EEEEeccc------------------ccCeEEEEEe-CCCcEEEEEeCCCcEEEEeCC
Q 047355 223 CVQILEGH------------------TNNVTAVCFH-PELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 223 ~~~~~~~h------------------~~~i~~l~~~-~~~~~l~s~s~dg~v~iwd~~ 261 (312)
... +.+. -.....|+++ +++.++++=....+|+.++++
T Consensus 376 v~t-~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 376 VTT-YAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEE-EECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEE-EEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 333 2221 1236788888 566666666666778777653
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.39 E-value=0.00049 Score=55.34 Aligned_cols=202 Identities=9% Similarity=0.081 Sum_probs=124.9
Q ss_pred hhhhcccCcEEEEEEcCCCCeEEE-EecCCeEEEEeccCCceeeeEEec-CCceeEEEEeeCCcEEEEecCCCeEEEEEc
Q 047355 11 KEFIQKSDRVKSVDFHPTQPWVLA-SLYSGTVCIWNYHSQTTEKSVKVT-DSPVRTAKFVAREHWIVCGSDDKFIRVFDY 88 (312)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~v~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~ 88 (312)
+.+.+..+.+..++|+|++..|++ ...++.|...|.+ ++..+.+... ......+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 456666778999999998776665 6678888888887 6666666432 234667788888876666556788889887
Q ss_pred cCcee---eeeec------ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCC--CceeeeEec-------CCccceEEE
Q 047355 89 NTMAS---VKEFE------AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK--NWECTQTFE-------GHSHYVMQS 150 (312)
Q Consensus 89 ~~~~~---~~~~~------~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~--~~~~~~~~~-------~~~~~v~~~ 150 (312)
..... ..... ........+++.|.+..|.++.......+|.+.. ......... .+......+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 12221 1234467999999987666666555555655431 101111111 112245678
Q ss_pred EeCCCCCCEEEEEeCCCeEEEEEcCCCcceee--ecccc-------cceeEEEEEEcCCceEEEEEeCCCeEEEEe
Q 047355 151 AFNPKDLNTFASASLDGTIQIWNMDSSAAKFT--LDAHE-------KGINCIDYFITSDKVYLITGSDDFTVKVWD 217 (312)
Q Consensus 151 ~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~--~~~~~-------~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd 217 (312)
.++|..+.+++.......+..+|.... .+.. +.... ....-++ ++++|.++++ ++-+.++.+.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia--~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVA--MDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEE--ECTTCCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeE--ECCCCCEEEE-cCCceEEEEE
Confidence 899987777777777888999997754 3322 22110 1233444 4677775555 5556666654
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00048 Score=60.14 Aligned_cols=233 Identities=10% Similarity=0.067 Sum_probs=132.2
Q ss_pred eEEEEee-CCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeC-CC----cEEEEeCCCCcee
Q 047355 63 RTAKFVA-REHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASD-DK----LIKLWDWEKNWEC 136 (312)
Q Consensus 63 ~~~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~-d~----~v~iwd~~~~~~~ 136 (312)
..+++.| ++..|+.+...+.|+.+|+++....... ........+++++++++|+.+.. ++ .+...+.......
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~ 218 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKV 218 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCS
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceee
Confidence 4667776 4556776665588889998875543333 23445788999999996555543 22 2333443222111
Q ss_pred eeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecc-cccceeEEEEEEcCCce-EEEEEeCCCeEE
Q 047355 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDA-HEKGINCIDYFITSDKV-YLITGSDDFTVK 214 (312)
Q Consensus 137 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~-~l~sg~~dg~i~ 214 (312)
...+.. ......++++|.++.++++-..++.|..++............ .......++ +++++. ++++-...+.|.
T Consensus 219 ~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia--~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 219 ITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQ--FHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp EEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEE--ECTTSSEEEEEETTTTEEE
T ss_pred eeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEE--EcCCCCEEEEEECCCCEEE
Confidence 111111 122344567875566777777788999999876543211111 112234444 577887 566666788899
Q ss_pred EEeCCC--CeE--EEEeccc---------------ccCeE-EEEEe--------CCCcEEEEEeCCCcEEEEeCCCccee
Q 047355 215 VWDYET--KTC--VQILEGH---------------TNNVT-AVCFH--------PELRIIITASEDGTILIWNATTFRLQ 266 (312)
Q Consensus 215 vwd~~~--~~~--~~~~~~h---------------~~~i~-~l~~~--------~~~~~l~s~s~dg~v~iwd~~~~~~~ 266 (312)
.++... ++. ...+.+. -..-. .++.. +++.++++=.....|+.++ .++++.
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEE
Confidence 987542 222 1122111 01123 45553 3456666666677899888 445443
Q ss_pred eeccc-----------------CccceEEEEEec-CCCeEEEEecCCeEEEE
Q 047355 267 NTLSS-----------------GLERVWSIGYKK-GSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 267 ~~~~~-----------------~~~~v~~~~~~~-~~~~l~~~~~~g~i~v~ 300 (312)
..... .....+.+++.| ++.++++-..+++|+..
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 22211 123689999999 57777776667777654
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.38 E-value=0.00071 Score=56.74 Aligned_cols=266 Identities=11% Similarity=0.041 Sum_probs=137.8
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe----cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCce
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV----TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA 92 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~ 92 (312)
...+.+|.|.+.+..++ ++.+|.|.. ..+.++.-..... ....+..+.|.+ +. ++.++.++.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 45799999987776666 556776533 3343332222211 234677888865 33 444556665543 333344
Q ss_pred eeeeec---ccccceeEEEEecCCCEEEEEeCCCcE-EEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 93 SVKEFE---AHEDYIRSLAVHPTFPFVLTASDDKLI-KLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 93 ~~~~~~---~h~~~i~~~~~~~~~~~l~t~s~d~~v-~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
..+... .+...+..+.+.+.+..++.+. ++.+ +-.|--..... ........+..+.+.|. ...++.+ .+|.
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~--~~~~~~~~~~~~~~~~~-~~~~~~g-~~G~ 184 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQA--LVQEAIGVMRNLNRSPS-GEYVAVS-SRGS 184 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEE--EECSCCCCEEEEEECTT-SCEEEEE-TTSS
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEE--eecCCCcceEEEEEcCC-CcEEEEE-CCCc
Confidence 333332 2334577788777666666554 5544 33332222221 12234456777888874 3455444 4554
Q ss_pred EEE-EEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec-c---cccCeEEEEEeCCC
Q 047355 169 IQI-WNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE-G---HTNNVTAVCFHPEL 243 (312)
Q Consensus 169 v~i-wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~---h~~~i~~l~~~~~~ 243 (312)
+.. .|-....-...-......+..+. ..+++..+ ..+.+|.+++.+...++.-..+. . +...+.++++.+++
T Consensus 185 ~~~S~d~gG~tW~~~~~~~~~~~~~~~--~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~ 261 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHNRTTSRRLHNMG--FTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN 261 (327)
T ss_dssp EEEEECTTCSSCEEEECCSSSCEEEEE--ECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS
T ss_pred EEEEeCCCCCceeECCCCCCCccceeE--ECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC
Confidence 443 33211111111112223444444 45666654 44567887776432232222121 1 22358899999887
Q ss_pred cEEEEEeCCCcEEEEeCCCcceeeeccc---CccceEEEEEecCCCeEEEEecCCeEE
Q 047355 244 RIIITASEDGTILIWNATTFRLQNTLSS---GLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
..++.+. ++.|. +....++-...+.. ....+.++.|.+++ .+.+++.+|++.
T Consensus 262 ~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~ 316 (327)
T 2xbg_A 262 EVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILL 316 (327)
T ss_dssp CEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEE
T ss_pred EEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEE
Confidence 7666655 67663 33333443333332 23567888887554 466667788765
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.33 E-value=0.00065 Score=59.39 Aligned_cols=233 Identities=12% Similarity=0.042 Sum_probs=133.0
Q ss_pred eEEEEeeC--CcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCC---Cc-EEEEeCCCCcee
Q 047355 63 RTAKFVAR--EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDD---KL-IKLWDWEKNWEC 136 (312)
Q Consensus 63 ~~~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d---~~-v~iwd~~~~~~~ 136 (312)
..+++.++ +..|+.+...+.|+.++..++.... +.........+++++++.++++-... .. +...+.......
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 46677763 4556666554889999987665443 33334457899999999954444321 11 222332211110
Q ss_pred eeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeee-cc-cccceeEEEEEEcCCce-EEEEEeCCCeE
Q 047355 137 TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTL-DA-HEKGINCIDYFITSDKV-YLITGSDDFTV 213 (312)
Q Consensus 137 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~-~l~sg~~dg~i 213 (312)
...+. .-.....++++|.++.++++-..++.|+.+|..++.....+ .. .......+ .+++++. ++++-...+.|
T Consensus 221 ~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~i--a~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 221 RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHI--VWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEE--EECTTSSEEEEEETTTTEE
T ss_pred ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccE--EEeCCCCEEEEEeCCCCEE
Confidence 01111 11222345667755566666667888999998755441222 11 11111234 3577776 56666677899
Q ss_pred EEEeCC--CCeE--EEEeccc---------------ccCeEEEEE---------eCCCcEEEEEeCCCcEEEEeCCCcce
Q 047355 214 KVWDYE--TKTC--VQILEGH---------------TNNVTAVCF---------HPELRIIITASEDGTILIWNATTFRL 265 (312)
Q Consensus 214 ~vwd~~--~~~~--~~~~~~h---------------~~~i~~l~~---------~~~~~~l~s~s~dg~v~iwd~~~~~~ 265 (312)
..++.. ++.. ...+.+. -.....+++ .+++.++++-.....|+.++. ++++
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 998754 2321 1111111 123567999 677777777777789999985 4443
Q ss_pred eeeccc-----------------CccceEEEEEe-cCCCeEEEEecCCeEEEE
Q 047355 266 QNTLSS-----------------GLERVWSIGYK-KGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 266 ~~~~~~-----------------~~~~v~~~~~~-~~~~~l~~~~~~g~i~v~ 300 (312)
...... .......|++. ++++++++-..+++|+..
T Consensus 377 ~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 377 TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 322111 13458899999 678777777778877754
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.0027 Score=59.64 Aligned_cols=246 Identities=11% Similarity=-0.021 Sum_probs=143.4
Q ss_pred eEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccCc----eeeeeeccccccee
Q 047355 31 WVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNTM----ASVKEFEAHEDYIR 105 (312)
Q Consensus 31 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~----~~~~~~~~h~~~i~ 105 (312)
+|+.+ ....|+..+++........ ........++|.+.+..|+ +-...+.|+.++++.. .....+........
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccc-cccceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 44433 3456787787765443333 2334566888888655555 4445678888888753 22223333334567
Q ss_pred EEEEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC-CeEEEEEcCCCcceeee
Q 047355 106 SLAVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD-GTIQIWNMDSSAAKFTL 183 (312)
Q Consensus 106 ~~~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-g~v~iwd~~~~~~~~~~ 183 (312)
.|++.+.+..|. +-...+.|.+.++...... ..+.........++++|..+.++++-... +.|...+++.......+
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEE-EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 899998775554 5556788999998654322 22222334466788888665555555333 78888888765544333
Q ss_pred cccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEeccc--ccCeEEEEEeCCCcEEEEEeCCCcEEEEeCC
Q 047355 184 DAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGH--TNNVTAVCFHPELRIIITASEDGTILIWNAT 261 (312)
Q Consensus 184 ~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~ 261 (312)
...-...+.+++.+ ..+.++++-.....|...++........+... -....+|++..+ +++++-...+.|...+..
T Consensus 554 ~~~l~~P~GLavD~-~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEec-CCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCC
Confidence 33333455555432 34566666667788999998655444333321 223457777443 556666667888888877
Q ss_pred CcceeeecccCccceEEEEE
Q 047355 262 TFRLQNTLSSGLERVWSIGY 281 (312)
Q Consensus 262 ~~~~~~~~~~~~~~v~~~~~ 281 (312)
+++.+..+.........|++
T Consensus 632 tG~~~~~l~~~l~~P~~i~v 651 (791)
T 3m0c_C 632 TGSDVNLLAENLLSPEDMVL 651 (791)
T ss_dssp TCCCCEEEECSCSCCCCEEE
T ss_pred CCcceEEeecCCCCceeEee
Confidence 77655555444444444443
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.0012 Score=62.00 Aligned_cols=207 Identities=11% Similarity=0.002 Sum_probs=123.4
Q ss_pred cCcEEEEEEcCCCCeEE-EEecCCeEEEEeccCCc----eeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccC
Q 047355 17 SDRVKSVDFHPTQPWVL-ASLYSGTVCIWNYHSQT----TEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNT 90 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~ 90 (312)
...+.+|+|++....|+ +-...+.|+.++++... ....+.........+++.+.++.|+ +-...+.|.+.+++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 45678999998665555 44556889888887531 1222221223455788887765555 445678999999876
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
......+...-.....|++.|....|..... .+.|...++..... .......-.....+++++.+..++++-...+.
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 5433333333345789999998766665543 26788888764322 22222233456778888766666666667788
Q ss_pred EEEEEcCCCcceeeecccc--cceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEe
Q 047355 169 IQIWNMDSSAAKFTLDAHE--KGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQIL 227 (312)
Q Consensus 169 v~iwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 227 (312)
|...+++.......+.... .....++ +.. +.++++-...+.|...+..+++.+..+
T Consensus 582 I~~~d~dG~~~~~v~~~~~~l~~P~gla--v~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEKRLAHPFSLA--VFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEE--EET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCceEEEecCCCccCCCCEEE--EeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 9999987655444333211 1223333 233 356666677788888886666444333
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.25 E-value=4e-05 Score=70.83 Aligned_cols=227 Identities=8% Similarity=0.003 Sum_probs=121.9
Q ss_pred EEEEcCCCCeEEEEec-CCeEEEEeccCCceeeeEEecCCce-eEEEEeeCCcEEEEec-CC-----CeEEEEEccCcee
Q 047355 22 SVDFHPTQPWVLASLY-SGTVCIWNYHSQTTEKSVKVTDSPV-RTAKFVAREHWIVCGS-DD-----KFIRVFDYNTMAS 93 (312)
Q Consensus 22 ~~~~~~~~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~g~-~d-----g~i~iwd~~~~~~ 93 (312)
++++.++++.++.|+. +..+.+||..+.+....-....... .++...++++.++.|+ .+ ..+.+||..+..-
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 4677789999998884 4589999987664433222222222 2445556888888888 34 5789999877542
Q ss_pred eeeecccc-cce----eEEEEecCCCEEEEEeCCC---------cEEEEeCCCCceeeeEecCC---------ccceEEE
Q 047355 94 VKEFEAHE-DYI----RSLAVHPTFPFVLTASDDK---------LIKLWDWEKNWECTQTFEGH---------SHYVMQS 150 (312)
Q Consensus 94 ~~~~~~h~-~~i----~~~~~~~~~~~l~t~s~d~---------~v~iwd~~~~~~~~~~~~~~---------~~~v~~~ 150 (312)
..+.... .+. ....+..++...+.|+.+| .+..||....... .....+ ...-..+
T Consensus 327 -~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~-~~~~~~~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 327 -TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV-KSAGKRQSNRGVAPDAMCGNAV 404 (656)
T ss_dssp -EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE-EEEEECEETTEECCCCBTCEEE
T ss_pred -eeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCccee-ecCCccccccccCCCCCCCceE
Confidence 2211000 000 0001112344445554443 4667776654211 111111 0111233
Q ss_pred EeCCCCCCEEEEEeCCC-----------eEEEEEcCCCcceeee--cccccceeEEEEEEcCCceEEEEEeCC-------
Q 047355 151 AFNPKDLNTFASASLDG-----------TIQIWNMDSSAAKFTL--DAHEKGINCIDYFITSDKVYLITGSDD------- 210 (312)
Q Consensus 151 ~~~~~~~~~~~s~s~dg-----------~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d------- 210 (312)
.|...+..+++.|+.++ .+.+||..+..-.... ..+........ ...+++.+++.|+.+
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~-~~l~~g~i~v~GG~~~~~~~~~ 483 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTS-VVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEE-EECTTSCEEEECCBSBCCTTCC
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCe-EECCCCCEEEECCcccCcCcCC
Confidence 33333556777777533 6778887765433222 11112222111 235678888888754
Q ss_pred ----CeEEEEeCCCCeEEEE--ecccccCeEEEEEeCCCcEEEEEeC
Q 047355 211 ----FTVKVWDYETKTCVQI--LEGHTNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 211 ----g~i~vwd~~~~~~~~~--~~~h~~~i~~l~~~~~~~~l~s~s~ 251 (312)
..+.+||.++.+.... +...+....+..+.|++++++.|+.
T Consensus 484 ~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 484 STPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 4689999887664432 1112222334556799999999985
No 287
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.22 E-value=0.002 Score=55.29 Aligned_cols=235 Identities=16% Similarity=0.214 Sum_probs=151.0
Q ss_pred EcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc-eeeeeecccc--
Q 047355 25 FHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM-ASVKEFEAHE-- 101 (312)
Q Consensus 25 ~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~-- 101 (312)
-||..+.+|-=+ ..+++|+|++.....+.+...+ +|.--.|..+.. |+-.+ +..|+.|+++.. .+.+.+..|.
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~-l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTE-EEEEC-SSEEEEEESSSSCCCEEEEECCGGG
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCe-EEEEc-CCeeEEecccCCCCchhheecchhc
Confidence 467777666554 7899999999988888887766 465666666544 44343 357999999743 4667776664
Q ss_pred --cceeEEEEecCCCEEEEEe-------CCCcEEEEeCCCCceeeeEecCCccceEEEEeCC--CCCCEEEEEeCC---C
Q 047355 102 --DYIRSLAVHPTFPFVLTAS-------DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNP--KDLNTFASASLD---G 167 (312)
Q Consensus 102 --~~i~~~~~~~~~~~l~t~s-------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~s~s~d---g 167 (312)
..|.....+++.+.++..+ -.|.+.+|..++. ..+.+++|........... ....+|+-+... +
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 3577778888888765322 2477888987653 4567888887665554432 112344444433 7
Q ss_pred eEEEEEcCCC---ccee---e----ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEE
Q 047355 168 TIQIWNMDSS---AAKF---T----LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAV 237 (312)
Q Consensus 168 ~v~iwd~~~~---~~~~---~----~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l 237 (312)
.+++.++... .+.+ . ++.....-..+....++.-..+..-+.-|.|++||++++.++..-+-..++|-.-
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEe
Confidence 8999998643 1111 1 1111111122333455555566677788999999999999987766666777766
Q ss_pred EEeCCCcEEEEEeCCCcEEEEeCCCcce
Q 047355 238 CFHPELRIIITASEDGTILIWNATTFRL 265 (312)
Q Consensus 238 ~~~~~~~~l~s~s~dg~v~iwd~~~~~~ 265 (312)
+.+....=++.....|.|.--.+..-.+
T Consensus 307 ~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 307 APHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred cccCCCCcEEEEccCceEEEEEEccccc
Confidence 6666555566666778777666655433
No 288
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.20 E-value=0.00039 Score=65.28 Aligned_cols=196 Identities=14% Similarity=0.074 Sum_probs=108.2
Q ss_pred ceeEEEEe-cCCCEEEEEeC-CC----cEEEEeCCCC-ceeeeEecCCccceEEEEeCCCCCCEEEEEeCC-----CeEE
Q 047355 103 YIRSLAVH-PTFPFVLTASD-DK----LIKLWDWEKN-WECTQTFEGHSHYVMQSAFNPKDLNTFASASLD-----GTIQ 170 (312)
Q Consensus 103 ~i~~~~~~-~~~~~l~t~s~-d~----~v~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-----g~v~ 170 (312)
.+...+|+ |++++|+.+.. +| .|+++|+.+. ......+. .......|+|.+ ..|+....| ..|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg-~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDH-TSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSST-TEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCC-CEEEEEEECCCCCCCEEE
Confidence 57788999 99998875533 33 4999998765 32111111 112346788854 455555554 2688
Q ss_pred EEEcCCCcce--eeecccccceeEEEEEEcCCceEEEEEe---CCCeEEEEeCCCC--eE--EEEecccccCeEEEEEeC
Q 047355 171 IWNMDSSAAK--FTLDAHEKGINCIDYFITSDKVYLITGS---DDFTVKVWDYETK--TC--VQILEGHTNNVTAVCFHP 241 (312)
Q Consensus 171 iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~sg~---~dg~i~vwd~~~~--~~--~~~~~~h~~~i~~l~~~~ 241 (312)
.+++.+.... ..+...... .......++|+++|+..+ ....|.++|+.++ +. ........+...++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPL-FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTT-CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCCc-eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 8888776432 222211111 122334689998877655 3446888898764 33 333344445566777666
Q ss_pred CCcEEEEEeCC----CcEEEEeCCCcceeee-cccCccceEEEEEecCCCeEE-EEecCCeEEEEecc
Q 047355 242 ELRIIITASED----GTILIWNATTFRLQNT-LSSGLERVWSIGYKKGSNQVA-FGCDNGTLIVKIGN 303 (312)
Q Consensus 242 ~~~~l~s~s~d----g~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~v~~~~ 303 (312)
.+.+++....+ ..|..+++.+...... +..+...+.--.+.++++.|+ +...+|..+|++-+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEe
Confidence 55555555544 2566677664222122 222333322223444555555 55667877766543
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.19 E-value=2.4e-05 Score=72.74 Aligned_cols=243 Identities=11% Similarity=-0.031 Sum_probs=136.5
Q ss_pred CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEec-CCCeEEEEEccC----ceeeeeecccccceeEEEEecC
Q 047355 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVFDYNT----MASVKEFEAHEDYIRSLAVHPT 112 (312)
Q Consensus 38 dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~----~~~~~~~~~h~~~i~~~~~~~~ 112 (312)
.+.|+..+++.......+... .....++|.+.+..|+.+. ..+.|+.+++.+ ......+...-.....|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 357788887765443333222 2445778888777777654 457899998875 2222222111223456788754
Q ss_pred CC-EEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCC-CeEEEEEcCCCcceeeecccccce
Q 047355 113 FP-FVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLD-GTIQIWNMDSSAAKFTLDAHEKGI 190 (312)
Q Consensus 113 ~~-~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-g~v~iwd~~~~~~~~~~~~~~~~v 190 (312)
+. ++++-...+.|.+.+...... ...+.........++++|.++.++++-... +.|..+++........+...-...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~-~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKR-KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCE-EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCce-EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 44 444445577899998764321 111221222334567777655555554333 678887776433222221111223
Q ss_pred eEEEEEEcCC-ceEEEEEeCCCeEEEEeCCCCeEEEEecc--cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceee
Q 047355 191 NCIDYFITSD-KVYLITGSDDFTVKVWDYETKTCVQILEG--HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN 267 (312)
Q Consensus 191 ~~~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~ 267 (312)
+.++ ++++ +.++++-+..+.|.++++........+.. ......+|++..+ .++++....+.|..++..+++...
T Consensus 543 nGla--vd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 543 NGIT--LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCEE--ECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred cEEE--EeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 4444 3443 55666777788999999865433333321 1223456677654 566666677899999988888777
Q ss_pred ecccCccceEEEEEecCC
Q 047355 268 TLSSGLERVWSIGYKKGS 285 (312)
Q Consensus 268 ~~~~~~~~v~~~~~~~~~ 285 (312)
.+......++.|++....
T Consensus 620 ~i~~~~~~P~~i~v~~~~ 637 (699)
T 1n7d_A 620 LLAENLLSPEDMVLFHQL 637 (699)
T ss_dssp CCCTTCSSCCCCCBCSSS
T ss_pred EeecCCCCCcEEEEeCcc
Confidence 776555566666655443
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.13 E-value=0.0018 Score=54.27 Aligned_cols=194 Identities=7% Similarity=0.135 Sum_probs=112.9
Q ss_pred CcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecC----CC---EEEEEeC---CCcEEEEeCCCCceeeeEe
Q 047355 71 EHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPT----FP---FVLTASD---DKLIKLWDWEKNWECTQTF 140 (312)
Q Consensus 71 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~----~~---~l~t~s~---d~~v~iwd~~~~~~~~~~~ 140 (312)
..+++.....+-+.+||+ +++.++.+.. +.++.+.+-|. ++ ++++... ++++.+|++......+...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345666667788999999 6677777653 44566655543 22 2333333 5789999774322223333
Q ss_pred cC------Cc-cceEEEEe--CCCCCC-EEEEEeCCCeEEEEEcCC---C----cceeeecccccceeEEEEEEcCCceE
Q 047355 141 EG------HS-HYVMQSAF--NPKDLN-TFASASLDGTIQIWNMDS---S----AAKFTLDAHEKGINCIDYFITSDKVY 203 (312)
Q Consensus 141 ~~------~~-~~v~~~~~--~~~~~~-~~~s~s~dg~v~iwd~~~---~----~~~~~~~~~~~~v~~~~~~~~~~~~~ 203 (312)
.. .. ..+..+++ +|.... ++++...+|.+..|++.. + +.+..+......-.|. ..+....
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Egcv---vDd~~g~ 193 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMA---ADDEYGR 193 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEE---EETTTTE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEE---EcCCCCe
Confidence 11 11 22333444 554433 677788889999999832 2 2233443332222332 3555566
Q ss_pred EEEEeCCCeEEEEeCC-----CCeEEEEec-cc-ccCeEEEEEe--CCCc-EEE-EEeCCCcEEEEeCC-Ccceeeecc
Q 047355 204 LITGSDDFTVKVWDYE-----TKTCVQILE-GH-TNNVTAVCFH--PELR-III-TASEDGTILIWNAT-TFRLQNTLS 270 (312)
Q Consensus 204 l~sg~~dg~i~vwd~~-----~~~~~~~~~-~h-~~~i~~l~~~--~~~~-~l~-s~s~dg~v~iwd~~-~~~~~~~~~ 270 (312)
|..+-++.-|..++.+ +.+.+..+. ++ ...+..|++- ++++ +|+ +.-.+.+..+||.. +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 7788888777777755 345555442 22 2468888884 4444 444 44467899999986 666666653
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.12 E-value=0.004 Score=56.97 Aligned_cols=240 Identities=12% Similarity=0.014 Sum_probs=131.4
Q ss_pred cCCeEEEEeccCCce-eeeEEecCCceeEEEEeeCCcEEEEec-CCCeEEEEEccCcee-eeeecccccceeEEEEecCC
Q 047355 37 YSGTVCIWNYHSQTT-EKSVKVTDSPVRTAKFVAREHWIVCGS-DDKFIRVFDYNTMAS-VKEFEAHEDYIRSLAVHPTF 113 (312)
Q Consensus 37 ~dg~v~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~-~~~~~~h~~~i~~~~~~~~~ 113 (312)
....|+..+++.... .............+.|.+.+..|+-+. ..+.|..++++.... ...+...-.....+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 457788888875431 112222233456888998777777554 467888888875432 22233322467889999865
Q ss_pred CEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEe-CCCeEEEEEcCCCcceeeeccccccee
Q 047355 114 PFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS-LDGTIQIWNMDSSAAKFTLDAHEKGIN 191 (312)
Q Consensus 114 ~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s-~dg~v~iwd~~~~~~~~~~~~~~~~v~ 191 (312)
..|. +-...+.|.+.+....... ......-.....++++|.++.++++-- ..+.|...+++...........-...+
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~-~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRK-VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 174 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCE-EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEE-EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCc
Confidence 5554 5556788999997654221 112222233456777776555555542 246777777765443333322223445
Q ss_pred EEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeeecc
Q 047355 192 CIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQNTLS 270 (312)
Q Consensus 192 ~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 270 (312)
.+.+ ++ +++++++-...+.|...|...........+......+|++..+ ..+.+-...+.|...|..+++....+.
T Consensus 175 Glal--d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 175 GLTL--DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp EEEE--ETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred EEEE--EccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEe
Confidence 5554 33 4566666677788999998754433332222223346777665 555566667889999987776555544
Q ss_pred cCccceEEEE
Q 047355 271 SGLERVWSIG 280 (312)
Q Consensus 271 ~~~~~v~~~~ 280 (312)
........+.
T Consensus 252 ~~~~~p~~i~ 261 (619)
T 3s94_A 252 SDIFSPMDIH 261 (619)
T ss_dssp SCCCCCSEEE
T ss_pred cCCCCCcEEE
Confidence 4433334443
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.09 E-value=2.4e-05 Score=72.70 Aligned_cols=219 Identities=11% Similarity=-0.008 Sum_probs=124.4
Q ss_pred CcEEEEEEcCCCCeEEEEe-cCCeEEEEeccC----CceeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccCc
Q 047355 18 DRVKSVDFHPTQPWVLASL-YSGTVCIWNYHS----QTTEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNTM 91 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~ 91 (312)
..+..++|++.+..|+.+. ..+.|+.+++.. ......+.........+++.+.+..|+ +-...+.|.+++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 4567889998777776654 567899998865 121111111111233456664444444 4445678999988765
Q ss_pred eeeeeecccccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeE
Q 047355 92 ASVKEFEAHEDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTI 169 (312)
Q Consensus 92 ~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v 169 (312)
.....+.........+++.|.+.+|+.+.. .+.|..+++...... ......-.....++++|.+..++++-+..+.|
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 433333222234577889887665554433 267777765432111 11111223345678888766777777788899
Q ss_pred EEEEcCCCcceeeeccc--ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEe
Q 047355 170 QIWNMDSSAAKFTLDAH--EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFH 240 (312)
Q Consensus 170 ~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~ 240 (312)
..++++.......+... ......++ +..+ .++++....+.|..++..+++.+..+.......+.|++.
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~gla--vd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLA--VFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCE--EETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred EEEccCCCceEEEEecCCcCCCceEeE--EECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 99999754333322211 11122233 2333 556666778899999988888777765433334455443
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.99 E-value=0.0072 Score=53.35 Aligned_cols=241 Identities=9% Similarity=0.109 Sum_probs=138.7
Q ss_pred cEEEEEEcC-CCCeEEEEecC-CeEEEEeccCCceeeeEEecC---CceeEEEE-------eeCCcEEEEecCCC-----
Q 047355 19 RVKSVDFHP-TQPWVLASLYS-GTVCIWNYHSQTTEKSVKVTD---SPVRTAKF-------VAREHWIVCGSDDK----- 81 (312)
Q Consensus 19 ~i~~~~~~~-~~~~l~~~~~d-g~v~iw~~~~~~~~~~~~~~~---~~v~~~~~-------~~~~~~l~~g~~dg----- 81 (312)
.-..|+|+| +...|+.+... +.|++.|+..+.......... .....++| .++++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899999 46667766554 678888887765544333221 23678889 89998777776553
Q ss_pred --eEEEEEccC-ceee-----eeecccccceeEEEEecCCCE-EEEEeCCCcEEEEeCC-------CCce------e---
Q 047355 82 --FIRVFDYNT-MASV-----KEFEAHEDYIRSLAVHPTFPF-VLTASDDKLIKLWDWE-------KNWE------C--- 136 (312)
Q Consensus 82 --~i~iwd~~~-~~~~-----~~~~~h~~~i~~~~~~~~~~~-l~t~s~d~~v~iwd~~-------~~~~------~--- 136 (312)
.|.+++... +... ..+... .....++++|++.. +++-..++.|..+|+. .... .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255555333 1111 122211 22456788995544 4556667889999976 2211 0
Q ss_pred -e-eEe-cCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcce----eeeccc------c---------cceeEEE
Q 047355 137 -T-QTF-EGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAK----FTLDAH------E---------KGINCID 194 (312)
Q Consensus 137 -~-~~~-~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~----~~~~~~------~---------~~v~~~~ 194 (312)
. ..+ .+.......++++|.+..++++-+..+.|+.++.+..... ..+.+. . .......
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 0 111 1122334678999865335677677889999776432211 111111 0 0111122
Q ss_pred EEEc------CCceEEEEEeCCCeEEEEeCCCCeEEEEeccc------------------------ccCeEEEEEeCC-C
Q 047355 195 YFIT------SDKVYLITGSDDFTVKVWDYETKTCVQILEGH------------------------TNNVTAVCFHPE-L 243 (312)
Q Consensus 195 ~~~~------~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h------------------------~~~i~~l~~~~~-~ 243 (312)
+... .++.++++-..+..|+.++. ++. +.++.+. -.....|+++++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 2221 46777888888889999984 454 3333221 013568888886 6
Q ss_pred cEEEEEeCCCcEEEEeCCC
Q 047355 244 RIIITASEDGTILIWNATT 262 (312)
Q Consensus 244 ~~l~s~s~dg~v~iwd~~~ 262 (312)
.++++=....+||.+++..
T Consensus 457 ~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEEEEETTTTEEEEEEECC
T ss_pred EEEEEeCCCCEEEEEECCC
Confidence 6666666677888888754
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.98 E-value=0.0048 Score=50.76 Aligned_cols=225 Identities=12% Similarity=0.081 Sum_probs=110.2
Q ss_pred CCCeEEEEe-cC-----CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC-----CeEEEEEccCce----
Q 047355 28 TQPWVLASL-YS-----GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD-----KFIRVFDYNTMA---- 92 (312)
Q Consensus 28 ~~~~l~~~~-~d-----g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~---- 92 (312)
++..++.|+ .+ ..+.++|..+.+-...-..............++..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445666666 33 367888887654332211122222222333456677777754 468889987654
Q ss_pred -eeeeecccccceeEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceee-eEecCCccceEEEEeCCCCCCEEEEEeC
Q 047355 93 -SVKEFEAHEDYIRSLAVHPTFPFVLTASDD-----KLIKLWDWEKNWECT-QTFEGHSHYVMQSAFNPKDLNTFASASL 165 (312)
Q Consensus 93 -~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d-----~~v~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 165 (312)
.+..+...... .+++. .++.+++.|+.+ ..+.+||..+..-.. .........-..+.+ +..+++.|+.
T Consensus 94 ~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~ 168 (301)
T 2vpj_A 94 YSVAPMNVRRGL-AGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA---SGVIYCLGGY 168 (301)
T ss_dssp EEECCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE---TTEEEEECCB
T ss_pred EECCCCCCCccc-eeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE---CCEEEEECCC
Confidence 12111111111 12222 256667777654 357788876542211 111111111111122 3356666665
Q ss_pred C-----CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-----CeEEEEeCCCCeEEEEecc--cc
Q 047355 166 D-----GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-----FTVKVWDYETKTCVQILEG--HT 231 (312)
Q Consensus 166 d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~--h~ 231 (312)
+ ..+.+||+.+..-... +........+. .. ++.+++.|+.+ ..+.+||.++.+-...-.. ..
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~---~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 244 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA---LL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR 244 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE---EE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEE---EE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc
Confidence 4 3588888876543221 11111111111 12 45666777654 4689999988765443221 11
Q ss_pred cCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCc
Q 047355 232 NNVTAVCFHPELRIIITASED-----GTILIWNATTF 263 (312)
Q Consensus 232 ~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~ 263 (312)
.....+. -++++++.|+.+ ..+.+||..+.
T Consensus 245 ~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 245 CYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred cceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 1222222 266777777765 35777887653
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.94 E-value=0.007 Score=51.25 Aligned_cols=225 Identities=12% Similarity=0.038 Sum_probs=114.5
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEE-----ecCCceeEEEEeeC---CcEEEEecC-C-----Ce
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK-----VTDSPVRTAKFVAR---EHWIVCGSD-D-----KF 82 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~l~~g~~-d-----g~ 82 (312)
-..-..++|.|+|+ |+.+..+|.|++++ + .+...... ........++++++ +..|+.+.. . +.
T Consensus 30 l~~P~~ia~~pdG~-l~V~e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIAERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSC-EEEEETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCe-EEEEeCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34568999999998 55566779999998 3 22211111 11345678899987 555655443 2 56
Q ss_pred EEEEEccCce------eeeeec---ccccceeEEEEecCCCEEEEEeCC-------------CcEEEEeCCCCc------
Q 047355 83 IRVFDYNTMA------SVKEFE---AHEDYIRSLAVHPTFPFVLTASDD-------------KLIKLWDWEKNW------ 134 (312)
Q Consensus 83 i~iwd~~~~~------~~~~~~---~h~~~i~~~~~~~~~~~l~t~s~d-------------~~v~iwd~~~~~------ 134 (312)
|..++..... .+..+. ........+++.|++.+.++.+.. +.|.-++.....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 7778776421 111122 111224689999999766654322 344444433200
Q ss_pred ------eeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe--------EEEEEcCC----------------Ccceeeec
Q 047355 135 ------ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT--------IQIWNMDS----------------SAAKFTLD 184 (312)
Q Consensus 135 ------~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~--------v~iwd~~~----------------~~~~~~~~ 184 (312)
.......++. ....++|+|.++.++++-..... |.+..... ..+...+.
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 0000111222 23456788755555555433222 33322111 01111221
Q ss_pred ccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe-------EEEEecccccCeEEEEEeCCCcEEEEEe
Q 047355 185 AHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT-------CVQILEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 185 ~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
.| .....+.+ .++.++++.-..+.|...+++... ....+. -...+..+++.||+.++++..
T Consensus 266 ~~-~ap~G~~~---~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 QG-FPPGNLAF---FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TC-CCEEEEEE---ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-SSCCEEEEEECTTSCEEEEEC
T ss_pred CC-CCCcceEE---ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-cCCCeeEEEECCCCcEEEEEe
Confidence 12 12233443 256666666666777777664321 112222 235688999999987666654
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.92 E-value=0.013 Score=53.78 Aligned_cols=199 Identities=10% Similarity=-0.042 Sum_probs=121.8
Q ss_pred CcEEEEEEcCCCCeEEEE-ecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEE-EecCCCeEEEEEccCceeee
Q 047355 18 DRVKSVDFHPTQPWVLAS-LYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIV-CGSDDKFIRVFDYNTMASVK 95 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~dg~i~iwd~~~~~~~~ 95 (312)
....+|+|++.+..|+.+ ..++.|+.++++.......+.........+++.+.+..|+ +-...+.|.+.+++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 467899999977666654 5678999999876544333332223455778876655555 44456889999887543222
Q ss_pred eecccccceeEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEE
Q 047355 96 EFEAHEDYIRSLAVHPTFPFVLTASD--DKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173 (312)
Q Consensus 96 ~~~~h~~~i~~~~~~~~~~~l~t~s~--d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd 173 (312)
.+...-..-..+++.|....|..... .+.|...++..... ..+...-.....+++++.+..+.++-...+.|..+|
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 22223344689999997666665543 45666666654321 122223345567888876656666667788999999
Q ss_pred cCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe
Q 047355 174 MDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKT 222 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 222 (312)
++..... .+.........+++ .. +..+++-...+.|...|..+++
T Consensus 195 ~dG~~~~-v~~~~l~~P~glav--~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 195 MLGLNRE-VIADDLPHPFGLTQ--YQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp TTSCSCE-EEEECCSCEEEEEE--ET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCceE-EeeccCCCceEEEE--EC-CEEEEecCCCCEEEEEECCCCC
Confidence 9765442 22222222334443 33 4566676678888888865553
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.85 E-value=0.0084 Score=49.54 Aligned_cols=253 Identities=11% Similarity=0.141 Sum_probs=155.5
Q ss_pred CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEE
Q 047355 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117 (312)
Q Consensus 38 dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 117 (312)
+..|.|-|+........-.. ...++..+|..+.|+.-. ..++.++|+++.+.++.+.-.+ +|.-=.|-.... |+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~-L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSSE-EE
T ss_pred CCEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCCe-EE
Confidence 34788889876544322211 123455688888777665 6799999999988887765544 454444544433 33
Q ss_pred EEeCCCcEEEEeCCCCceeeeEecCCcc----ceEEEEeCCCCCCEEEEEe------CCCeEEEEEcCCCcceeeecccc
Q 047355 118 TASDDKLIKLWDWEKNWECTQTFEGHSH----YVMQSAFNPKDLNTFASAS------LDGTIQIWNMDSSAAKFTLDAHE 187 (312)
Q Consensus 118 t~s~d~~v~iwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~s~s------~dg~v~iwd~~~~~~~~~~~~~~ 187 (312)
-.. +..|.-|++.....+.+.|..|.. .+.....++...-.++.|- ..|.+.+|..+.. .-+.+++|.
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGha 199 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHA 199 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSE
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeee
Confidence 333 467999999776667777776643 4566666664433333332 2357889988654 334566765
Q ss_pred cceeEEEEEEcCC-ceEEEEEeC---CCeEEEEeCCCC---------eEEEEeccc---ccCeEEEEEeCCCcEEEEEeC
Q 047355 188 KGINCIDYFITSD-KVYLITGSD---DFTVKVWDYETK---------TCVQILEGH---TNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 188 ~~v~~~~~~~~~~-~~~l~sg~~---dg~i~vwd~~~~---------~~~~~~~~h---~~~i~~l~~~~~~~~l~s~s~ 251 (312)
.....+...-.+. ...++-+.. -+++++.++... +....+... .+---++..++.-..+..-..
T Consensus 200 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK 279 (365)
T 2xzh_A 200 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 279 (365)
T ss_dssp EEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEET
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeC
Confidence 5433221100001 112222211 147888887432 112222111 333557888888888999999
Q ss_pred CCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 252 DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 252 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
-|.|.++|+.++..+..-....+.+..-+-......++....+|.+.
T Consensus 280 ~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 280 YGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred CcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 99999999999998877776777777777777777777777888755
No 298
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.84 E-value=0.0085 Score=49.29 Aligned_cols=224 Identities=13% Similarity=0.156 Sum_probs=106.9
Q ss_pred CCeEEEEecC----CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC-----CeEEEEEccCcee--eeee
Q 047355 29 QPWVLASLYS----GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD-----KFIRVFDYNTMAS--VKEF 97 (312)
Q Consensus 29 ~~~l~~~~~d----g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~--~~~~ 97 (312)
+..++.|+.+ ..+..+|+.+.+-...-..............++..++.|+.+ ..+.+||..+.+- +..+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 3455566644 357788887654322211111111122223366677777654 3588888876531 1111
Q ss_pred cccccceeEEEEecCCCEEEEEeCCC-----cEEEEeCCCCceeee-EecCCccceEEEEeCCCCCCEEEEEeCC-----
Q 047355 98 EAHEDYIRSLAVHPTFPFVLTASDDK-----LIKLWDWEKNWECTQ-TFEGHSHYVMQSAFNPKDLNTFASASLD----- 166 (312)
Q Consensus 98 ~~h~~~i~~~~~~~~~~~l~t~s~d~-----~v~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~s~d----- 166 (312)
...... .+++. -++.+++.|+.++ .+.+||..+..-... ...........+.+ +..+++.|+.+
T Consensus 96 p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 96 RDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQ 170 (302)
T ss_dssp SSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTTTE
T ss_pred Cccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE---CCEEEEEeCCCCCCCc
Confidence 111111 12222 2556677777553 466777655421111 11111111111122 23455665542
Q ss_pred --CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-----CeEEEEeCCCCeEEEEecc--cccCeE
Q 047355 167 --GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-----FTVKVWDYETKTCVQILEG--HTNNVT 235 (312)
Q Consensus 167 --g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~--h~~~i~ 235 (312)
..+.+||+.+..-... +....... +.. .. ++.+++.|+.+ ..+.+||.++.+-...-.. ....-.
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~--~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~ 246 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGA-GVG--VL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG 246 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSC-EEE--EE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccc-cEE--EE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe
Confidence 3578888876542221 11111111 111 12 45667777654 3689999987765443211 111112
Q ss_pred EEEEeCCCcEEEEEeCCC-----cEEEEeCCCc
Q 047355 236 AVCFHPELRIIITASEDG-----TILIWNATTF 263 (312)
Q Consensus 236 ~l~~~~~~~~l~s~s~dg-----~v~iwd~~~~ 263 (312)
.+. .++++++.|+.++ .+.+||..+.
T Consensus 247 ~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 247 VCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 222 2667778887653 4888888764
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.84 E-value=0.0097 Score=49.86 Aligned_cols=201 Identities=9% Similarity=0.179 Sum_probs=118.5
Q ss_pred EEEEcCC---CCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeC----CcE--EEEec--C--CCeEEEEEc
Q 047355 22 SVDFHPT---QPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAR----EHW--IVCGS--D--DKFIRVFDY 88 (312)
Q Consensus 22 ~~~~~~~---~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~~g~--~--dg~i~iwd~ 88 (312)
++=.||. ..++++....+.+.+||+ .++.++.+.. +..+.+...++ ++. ++.++ . +++|.+|++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 4434553 456777788899999999 5556655532 45566655552 222 33333 3 579999977
Q ss_pred cC-ceeeeeecc------cc-cceeEEEE--ecC-CC-EEEEEeCCCcEEEEeCCC------CceeeeEecCCccceEEE
Q 047355 89 NT-MASVKEFEA------HE-DYIRSLAV--HPT-FP-FVLTASDDKLIKLWDWEK------NWECTQTFEGHSHYVMQS 150 (312)
Q Consensus 89 ~~-~~~~~~~~~------h~-~~i~~~~~--~~~-~~-~l~t~s~d~~v~iwd~~~------~~~~~~~~~~~~~~v~~~ 150 (312)
+. ...++.+.. .. ..+..+++ +|. ++ +++....+|.+..|++.. ..+.++++.-. ..+..+
T Consensus 107 Dp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~Egc 185 (355)
T 3amr_A 107 DGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGM 185 (355)
T ss_dssp CTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEE
T ss_pred CCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceE
Confidence 41 223444421 11 45666777 564 44 577788889999998732 11233444433 345566
Q ss_pred EeCCCCCCEEEEEeCCCeEEEEEcCCC-----cceeeec-ccc-cceeEEEEEEcCCce-EEEEEe-CCCeEEEEeCC-C
Q 047355 151 AFNPKDLNTFASASLDGTIQIWNMDSS-----AAKFTLD-AHE-KGINCIDYFITSDKV-YLITGS-DDFTVKVWDYE-T 220 (312)
Q Consensus 151 ~~~~~~~~~~~s~s~dg~v~iwd~~~~-----~~~~~~~-~~~-~~v~~~~~~~~~~~~-~l~sg~-~dg~i~vwd~~-~ 220 (312)
...+. ...++.+-++.-|..++.+.. ..+..+. ++- ..+.-+.+...+++. ||++.+ .+....+||.+ +
T Consensus 186 vvDd~-~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 186 AADDE-YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEETT-TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEcCC-CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 66663 468888888877777775522 2222221 222 356667665455544 555555 67899999996 5
Q ss_pred CeEEEEe
Q 047355 221 KTCVQIL 227 (312)
Q Consensus 221 ~~~~~~~ 227 (312)
.+.+..+
T Consensus 265 ~~~vg~f 271 (355)
T 3amr_A 265 NKYVADF 271 (355)
T ss_dssp CCEEEEE
T ss_pred CcEEEEE
Confidence 6666555
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.84 E-value=0.018 Score=52.77 Aligned_cols=236 Identities=12% Similarity=0.002 Sum_probs=142.8
Q ss_pred CeEEEEecCCeEEEEeccCCceeeeEEec-CCceeEEEEeeCCcEEEEe-cCCCeEEEEEccCceeeeeecccccceeEE
Q 047355 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVT-DSPVRTAKFVAREHWIVCG-SDDKFIRVFDYNTMASVKEFEAHEDYIRSL 107 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~ 107 (312)
++|+.+ ..+.|+..+++.......+... -.....+.|.+.+..|+-+ ..++.|..++++.......+.........+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 355544 5678899998765433322221 2346688999877776654 467889988887644333333323456789
Q ss_pred EEecCCCEEE-EEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEE-eCCCeEEEEEcCCCcceeeecc
Q 047355 108 AVHPTFPFVL-TASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASA-SLDGTIQIWNMDSSAAKFTLDA 185 (312)
Q Consensus 108 ~~~~~~~~l~-t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~-s~dg~v~iwd~~~~~~~~~~~~ 185 (312)
++.+.+..|. +-...+.|.+.+....... ......-.....++++|..+.++.+- +..+.|...+++.........
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~-~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~- 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQ-VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP- 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCE-EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEE-EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-
Confidence 9987665554 4455678888887654221 11222334456788888665555554 235678888887654433332
Q ss_pred cccceeEEEEEEcC-CceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcc
Q 047355 186 HEKGINCIDYFITS-DKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFR 264 (312)
Q Consensus 186 ~~~~v~~~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~ 264 (312)
.-...+.+.+ ++ .++++++-...+.|..+|+..... ..+........++++.. +.++.+-...+.|...|..+++
T Consensus 164 ~~~~P~Glal--D~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 164 NVGRANGLTI--DYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp SCSSEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCcceEEE--ccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 2233455553 44 456666767788999999865433 33333334456888876 4666666667889999977765
Q ss_pred eeeecccC
Q 047355 265 LQNTLSSG 272 (312)
Q Consensus 265 ~~~~~~~~ 272 (312)
....+...
T Consensus 240 ~~~~l~~~ 247 (628)
T 4a0p_A 240 NRTIIQGH 247 (628)
T ss_dssp SCEEEECS
T ss_pred ceEEEecC
Confidence 54444433
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.80 E-value=0.011 Score=49.33 Aligned_cols=230 Identities=13% Similarity=0.093 Sum_probs=121.0
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe---cCCceeEEEEeeCCcEEEEecCCCeEEEEEccCcee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV---TDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS 93 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~ 93 (312)
...+.+|+|+| + .+++++.+|.|.. ..+.++.-..... ....+..+.+.+++..++.+ .+|.|.. ..+.++.
T Consensus 79 ~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-T-EEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS
T ss_pred CccEEEEEecC-C-eEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC
Confidence 34789999986 3 4555567776554 2333333222221 12345667777766655555 4554422 2222332
Q ss_pred eeee-cccccceeEEEEecCCCEEEEEeCCCcEEEEeC-CCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEE
Q 047355 94 VKEF-EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDW-EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQI 171 (312)
Q Consensus 94 ~~~~-~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~i 171 (312)
.+.. ..+...+..+.+.+++.+++.+...+..+-+|- ....... -......+..+.+.+.+ .++..+.+|.+++
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g--~~~~~~~~G~~~~ 229 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDG--RLWMIVNGGKIAF 229 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTS--CEEEEETTTEEEE
T ss_pred CEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCC--CEEEEeCCceEEE
Confidence 2222 334557889999998888776655444444553 1222221 12334556677777643 3555667888877
Q ss_pred EEcCCCcceeeec-c---cccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEec---ccccCeEEEEEeCCCc
Q 047355 172 WNMDSSAAKFTLD-A---HEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILE---GHTNNVTAVCFHPELR 244 (312)
Q Consensus 172 wd~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---~h~~~i~~l~~~~~~~ 244 (312)
.+.+.++.-..+. . ....+..+. ..+++.+++++ .+|.| ++....++.-..+. .+...++++.|.++++
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~--~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~ 305 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLA--YRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ 305 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEE--ESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEE--ecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc
Confidence 6432221111111 1 112345554 34556655554 46766 34444333222222 2345688999986655
Q ss_pred EEEEEeCCCcEEEEeC
Q 047355 245 IIITASEDGTILIWNA 260 (312)
Q Consensus 245 ~l~s~s~dg~v~iwd~ 260 (312)
++.++.+|.|.-++-
T Consensus 306 -~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 306 -GFILGQKGILLRYVT 320 (327)
T ss_dssp -EEEECSTTEEEEECC
T ss_pred -eEEEcCCceEEEEcC
Confidence 666677888877653
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.80 E-value=0.011 Score=49.11 Aligned_cols=198 Identities=9% Similarity=0.097 Sum_probs=117.6
Q ss_pred ccceeEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeeeEecCC------ccceEEEEe---CCCCCCEEEEEe------
Q 047355 101 EDYIRSLAVHPTFPFVLTAS-DDKLIKLWDWEKNWECTQTFEGH------SHYVMQSAF---NPKDLNTFASAS------ 164 (312)
Q Consensus 101 ~~~i~~~~~~~~~~~l~t~s-~d~~v~iwd~~~~~~~~~~~~~~------~~~v~~~~~---~~~~~~~~~s~s------ 164 (312)
...-.+.+|++....+..++ ..++|..||..........+.+- ...+..+.+ .|. +.++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 33456788988666666565 68999999976432111123221 113567888 564 44555432
Q ss_pred -------CCCeEEEEEcC---CCcceeeec--ccc---------cceeEEEEEEcCCceEEEEEeCC-CeEEEEeCCCCe
Q 047355 165 -------LDGTIQIWNMD---SSAAKFTLD--AHE---------KGINCIDYFITSDKVYLITGSDD-FTVKVWDYETKT 222 (312)
Q Consensus 165 -------~dg~v~iwd~~---~~~~~~~~~--~~~---------~~v~~~~~~~~~~~~~l~sg~~d-g~i~vwd~~~~~ 222 (312)
.+..|..||+. +++...... ... ..-.+.++...++|+..++++.- +.|...+.....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence 26789999998 666554432 211 11235566678999999999988 888888876443
Q ss_pred EEEEe-cc----cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcce-eeecc--c---CccceEE-EEEecCCCeEEE
Q 047355 223 CVQIL-EG----HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRL-QNTLS--S---GLERVWS-IGYKKGSNQVAF 290 (312)
Q Consensus 223 ~~~~~-~~----h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~-~~~~~--~---~~~~v~~-~~~~~~~~~l~~ 290 (312)
..... .. ..-..+.|+++|++..|+.....|.+..+|+.+... .-.+. + .....-. +.-..+|+.|++
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEE
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEE
Confidence 22211 11 112367999999999888887799999999874322 01111 1 1122233 344567888554
Q ss_pred Ee-cCCeEEE
Q 047355 291 GC-DNGTLIV 299 (312)
Q Consensus 291 ~~-~~g~i~v 299 (312)
+. .++.+.+
T Consensus 251 ~~~~~~~~~l 260 (334)
T 2p9w_A 251 GARAPYAISF 260 (334)
T ss_dssp EEETTEEEEE
T ss_pred EcCCCCEEEE
Confidence 44 4554333
No 303
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.013 Score=47.01 Aligned_cols=198 Identities=10% Similarity=0.045 Sum_probs=113.2
Q ss_pred eecccccceeEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeeeEec-CCccceEEEEeCCCCCCEEEEEeCCCeEEEEE
Q 047355 96 EFEAHEDYIRSLAVHPTFPFV-LTASDDKLIKLWDWEKNWECTQTFE-GHSHYVMQSAFNPKDLNTFASASLDGTIQIWN 173 (312)
Q Consensus 96 ~~~~h~~~i~~~~~~~~~~~l-~t~s~d~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd 173 (312)
.+.+-...+..+++.|++..| ++...++.|...|... ...+.+. ......-.+++.+. +.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g--~v~~~i~l~g~~D~EGIa~~~~-g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG--DLIRTIPLDFVKDLETIEYIGD-NQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC--CEEEEEECSSCSSEEEEEECST-TEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC--CEEEEEecCCCCChHHeEEeCC-CEEEEEECCCCcEEEEE
Confidence 445555679999999976655 4566677888888762 3333331 11233455666653 34555555678899998
Q ss_pred cCCCccee---ee--c----ccccceeEEEEEEcCCceEEEEEeC-CC-eEEEEeC-CCCeEEEEec-------ccccCe
Q 047355 174 MDSSAAKF---TL--D----AHEKGINCIDYFITSDKVYLITGSD-DF-TVKVWDY-ETKTCVQILE-------GHTNNV 234 (312)
Q Consensus 174 ~~~~~~~~---~~--~----~~~~~v~~~~~~~~~~~~~l~sg~~-dg-~i~vwd~-~~~~~~~~~~-------~h~~~i 234 (312)
+....... .. . ....+...+++. +++..|.++.+ +. .|..|+- .....+..+. .+...+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d--~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYS--RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEE--TTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEe--CCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 87654211 11 1 123345677754 44433333443 33 4555551 0111112121 123457
Q ss_pred EEEEEeCC-CcEEEEEeCCCcEEEEeCCCcceeee--ccc-------CccceEEEEEecCCCeEEEEecCCeEEEE
Q 047355 235 TAVCFHPE-LRIIITASEDGTILIWNATTFRLQNT--LSS-------GLERVWSIGYKKGSNQVAFGCDNGTLIVK 300 (312)
Q Consensus 235 ~~l~~~~~-~~~l~s~s~dg~v~iwd~~~~~~~~~--~~~-------~~~~v~~~~~~~~~~~l~~~~~~g~i~v~ 300 (312)
.+++++|. +++++.....+.+..+|.. ++.+.. +.. ...+.-.++|.++|+..++ ++...+++-
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 89999995 4566666677889999965 444332 221 1247789999999986666 666655543
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.68 E-value=0.032 Score=51.03 Aligned_cols=154 Identities=10% Similarity=0.036 Sum_probs=92.9
Q ss_pred ceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE
Q 047355 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ 225 (312)
Q Consensus 146 ~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 225 (312)
....+.|++.+..++++-...+.|+.++++.......+...-.....+++.. ..+.++.+-+..+.|.+.++.......
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~-~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDW-VARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEec-ccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 4567888876656666666678899998876443333322223344555422 245667777788899999987543333
Q ss_pred EecccccCeEEEEEeCCCcEEEEEeC--CCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEec-CCeEEEE
Q 047355 226 ILEGHTNNVTAVCFHPELRIIITASE--DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCD-NGTLIVK 300 (312)
Q Consensus 226 ~~~~h~~~i~~l~~~~~~~~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~v~ 300 (312)
.+...-...++|+++|....|.-... ...|...+...................|++.++.+.|.++.. .++|...
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 33333356789999996444443332 356766666432222222334677889999988777776654 3455443
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.67 E-value=0.016 Score=47.63 Aligned_cols=222 Identities=9% Similarity=-0.005 Sum_probs=108.5
Q ss_pred eEEEEecC--CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC----CeEEEEEccCcee--eeeeccccc
Q 047355 31 WVLASLYS--GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD----KFIRVFDYNTMAS--VKEFEAHED 102 (312)
Q Consensus 31 ~l~~~~~d--g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~--~~~~~~h~~ 102 (312)
.++.|+.+ ..+.+||..+.+-...-..............++..++.|+.+ ..+.+||..+.+- +..+.....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 44556543 568888887654332211111122222233466667777654 6788889877532 111211111
Q ss_pred ceeEEEEecCCCEEEEEeCC------CcEEEEeCCCCceeee-EecCCccceEEEEeCCCCCCEEEEEeC---------C
Q 047355 103 YIRSLAVHPTFPFVLTASDD------KLIKLWDWEKNWECTQ-TFEGHSHYVMQSAFNPKDLNTFASASL---------D 166 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~t~s~d------~~v~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~s~---------d 166 (312)
. .+++. -++.+++.|+.+ ..+.+||.....-... .+......-..+.+ +..+++.|+. -
T Consensus 94 ~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 94 S-LAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp S-CEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEEC
T ss_pred c-eeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE---CCEEEEECCCCCCCCccccc
Confidence 1 12222 256677777765 4588888765422111 11100011111122 2345555543 3
Q ss_pred CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-----CeEEEEeCCCCeEEEE--ecccccCeEEE
Q 047355 167 GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-----FTVKVWDYETKTCVQI--LEGHTNNVTAV 237 (312)
Q Consensus 167 g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~i~~l 237 (312)
..+.+||+.+..-... +....... +.. .. ++.+++.|+.+ ..+.+||..+.+-... +........++
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~--~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 244 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNH-GLV--FV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA 244 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC-EEE--EE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE
T ss_pred ceEEEeCCCCCeEEECCCccchhhcc-eEE--EE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE
Confidence 4578888877642221 11111111 111 12 45666666543 3588999987754432 22112222333
Q ss_pred EEeCCCcEEEEEeCC-----CcEEEEeCCCc
Q 047355 238 CFHPELRIIITASED-----GTILIWNATTF 263 (312)
Q Consensus 238 ~~~~~~~~l~s~s~d-----g~v~iwd~~~~ 263 (312)
.+ ++++++.|+.+ ..+.+||..+.
T Consensus 245 ~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 245 AV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 33 66788888854 46888888763
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.64 E-value=0.024 Score=48.78 Aligned_cols=253 Identities=11% Similarity=0.150 Sum_probs=158.0
Q ss_pred CCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEE
Q 047355 38 SGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVL 117 (312)
Q Consensus 38 dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 117 (312)
+..|.|-|+........-.. ...++..+|..+.|+.-. ..++.++|+++...++.+.-.++ |.-=.|-... .|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~-VvfWkWis~~-~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLN-TVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC-CCEEEEEETT-EEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC-ceEEEecCCC-eEE
Confidence 34788889876544322221 123455777777776654 68999999999888877765543 4434444333 333
Q ss_pred EEeCCCcEEEEeCCCCceeeeEecCCcc----ceEEEEeCCCCCCEEEEEe------CCCeEEEEEcCCCcceeeecccc
Q 047355 118 TASDDKLIKLWDWEKNWECTQTFEGHSH----YVMQSAFNPKDLNTFASAS------LDGTIQIWNMDSSAAKFTLDAHE 187 (312)
Q Consensus 118 t~s~d~~v~iwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~s~s------~dg~v~iwd~~~~~~~~~~~~~~ 187 (312)
-.. +..|.-|++.....+.+.|..|.. .+.....++...-.++.|- ..|.+.+|..+... -+.+++|.
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGha 198 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHA 198 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSE
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeee
Confidence 333 468999999766567777776643 4666666765433333332 34678899886543 34567776
Q ss_pred cceeEEEEEEcCC-ceEEEEEeC---CCeEEEEeCCCC---------eEEEEecc---cccCeEEEEEeCCCcEEEEEeC
Q 047355 188 KGINCIDYFITSD-KVYLITGSD---DFTVKVWDYETK---------TCVQILEG---HTNNVTAVCFHPELRIIITASE 251 (312)
Q Consensus 188 ~~v~~~~~~~~~~-~~~l~sg~~---dg~i~vwd~~~~---------~~~~~~~~---h~~~i~~l~~~~~~~~l~s~s~ 251 (312)
.....+...-.+. ...++-+.. -+++++.++... +....+-. -.+---++..++.-..+..-..
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK 278 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence 5443332100011 122333322 268888887432 11111111 1233557888998888999999
Q ss_pred CCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 252 DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 252 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
-|.|.++|+.++..+..-....+.+..-+.......++....+|.+.
T Consensus 279 ~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred CceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 99999999999988777666777787777777777777777888755
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.61 E-value=0.024 Score=47.95 Aligned_cols=231 Identities=10% Similarity=0.004 Sum_probs=117.8
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEE---ecCCceeEEEEeeC---CcEEEEecC----C----Ce
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK---VTDSPVRTAKFVAR---EHWIVCGSD----D----KF 82 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~g~~----d----g~ 82 (312)
-..-..++|.|+|+ |+++..+|.|++++.+..+....+. ........+++.++ +..|+.+.. + ..
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 35678999999997 5556677999999743221111111 12245678899987 555554432 2 56
Q ss_pred EEEEEccCc-------ee-eeeecc-cccceeEEEEecCCCEEEEEeCC-------------CcEEEEeCCCCc------
Q 047355 83 IRVFDYNTM-------AS-VKEFEA-HEDYIRSLAVHPTFPFVLTASDD-------------KLIKLWDWEKNW------ 134 (312)
Q Consensus 83 i~iwd~~~~-------~~-~~~~~~-h~~~i~~~~~~~~~~~l~t~s~d-------------~~v~iwd~~~~~------ 134 (312)
|..|+.... +. +..+.. .......++|.|++.+.++.+.. |.|.-++.....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777776543 11 111211 11124679999999876664432 344444432210
Q ss_pred -eeeeEecCCccceEEEEeCCCCCCEEEEEeCCC---eEEEEEcCCC----------------cceeee-cccccceeEE
Q 047355 135 -ECTQTFEGHSHYVMQSAFNPKDLNTFASASLDG---TIQIWNMDSS----------------AAKFTL-DAHEKGINCI 193 (312)
Q Consensus 135 -~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg---~v~iwd~~~~----------------~~~~~~-~~~~~~v~~~ 193 (312)
.......++. ....++|+|.++.++++-.... .|.+...... .+...+ ..+ .....+
T Consensus 187 ~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap~G~ 264 (354)
T 3a9g_A 187 PNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET-WAPSGA 264 (354)
T ss_dssp TTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CCEEEE
T ss_pred CCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC-cCCcce
Confidence 0001112222 2346778874445544432221 2333221110 111112 111 123333
Q ss_pred EEE-----EcCCceEEEEEeCCCeEEEEeCCCC-eEE---EEecccccCeEEEEEeCCCcEEEEEe
Q 047355 194 DYF-----ITSDKVYLITGSDDFTVKVWDYETK-TCV---QILEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 194 ~~~-----~~~~~~~l~sg~~dg~i~vwd~~~~-~~~---~~~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
.+. +..++.++++.-..+.|...++... +.. ..+.+-...+..+++.||+.++++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 331 1245777777767778888887642 221 22222245688999999987666554
No 308
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.61 E-value=0.032 Score=49.25 Aligned_cols=237 Identities=12% Similarity=0.060 Sum_probs=135.8
Q ss_pred eEEEEee-CCcEEEEec-CCCeEEEEEccCceeeeeeccc---ccceeEEEE-------ecCCCEEEEEeCCC-------
Q 047355 63 RTAKFVA-REHWIVCGS-DDKFIRVFDYNTMASVKEFEAH---EDYIRSLAV-------HPTFPFVLTASDDK------- 123 (312)
Q Consensus 63 ~~~~~~~-~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h---~~~i~~~~~-------~~~~~~l~t~s~d~------- 123 (312)
..++|.| +...|+.+. ..+.|++.|+++.......... ......++| ++++..++.+...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 3567776 344455444 3467888888876544333221 234788999 99998666665543
Q ss_pred cEEEEeCCC--Cce--e-eeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcC-------CCcc-----------e
Q 047355 124 LIKLWDWEK--NWE--C-TQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMD-------SSAA-----------K 180 (312)
Q Consensus 124 ~v~iwd~~~--~~~--~-~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~-------~~~~-----------~ 180 (312)
.+.+.+... ... . ...+... .....++.+|.+..++++-..++.|..+|+. ++.. .
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred eEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 255665333 111 0 0111111 1123456788666777788888999999987 3432 1
Q ss_pred ee-ec-ccccceeEEEEEEcCCce-EEEEEeCCCeEEEEeC--CCCeEE--EEeccc---c------------cCeE-EE
Q 047355 181 FT-LD-AHEKGINCIDYFITSDKV-YLITGSDDFTVKVWDY--ETKTCV--QILEGH---T------------NNVT-AV 237 (312)
Q Consensus 181 ~~-~~-~~~~~v~~~~~~~~~~~~-~l~sg~~dg~i~vwd~--~~~~~~--~~~~~h---~------------~~i~-~l 237 (312)
.. +. +.......++ +++++. ++++-+....|+.++. ..+... ..+.+. . .... .+
T Consensus 301 ~~l~~~~~~~~p~~ia--~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 301 KQLFTIADPSWEFQIF--IHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp EEEEECSSSSCCEEEE--ECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ceeEecCCCCCceEEE--EcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 11 11 1112234444 577887 4666677888998654 333321 222221 0 1234 45
Q ss_pred EEe-------CCCcEEEEEeCCCcEEEEeCCCcceeeeccc------------------------CccceEEEEEecC-C
Q 047355 238 CFH-------PELRIIITASEDGTILIWNATTFRLQNTLSS------------------------GLERVWSIGYKKG-S 285 (312)
Q Consensus 238 ~~~-------~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------------------------~~~~v~~~~~~~~-~ 285 (312)
+.. +++.++++=....+||.++ .++... ++.+ .......|++.++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~-TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS-TYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE-EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCCEE-EEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 554 4566666667778999998 444332 2211 1245889999997 8
Q ss_pred CeEEEEecCCeEEEEeccC
Q 047355 286 NQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 286 ~~l~~~~~~g~i~v~~~~~ 304 (312)
+++++=..+.+|+..-.+.
T Consensus 457 ~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEEEEETTTTEEEEEEECC
T ss_pred EEEEEeCCCCEEEEEECCC
Confidence 8888888888888665543
No 309
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.57 E-value=0.023 Score=46.81 Aligned_cols=227 Identities=11% Similarity=0.079 Sum_probs=108.5
Q ss_pred cCCCCeEEEEecC----CeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecC----C-----CeEEEEEccCce
Q 047355 26 HPTQPWVLASLYS----GTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSD----D-----KFIRVFDYNTMA 92 (312)
Q Consensus 26 ~~~~~~l~~~~~d----g~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~----d-----g~i~iwd~~~~~ 92 (312)
.-++..++.|+.+ ..+.++|..+.+-...-..............++..++.|+. + ..+.+||..+.+
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3355667777743 35788888765433221111111111222335666666665 2 457888887653
Q ss_pred e--eeeecccccceeEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceee-eEecCCccceEEEEeCCCCCCEEEEEe
Q 047355 93 S--VKEFEAHEDYIRSLAVHPTFPFVLTASDD-----KLIKLWDWEKNWECT-QTFEGHSHYVMQSAFNPKDLNTFASAS 164 (312)
Q Consensus 93 ~--~~~~~~h~~~i~~~~~~~~~~~l~t~s~d-----~~v~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~s 164 (312)
- +..+...... .+++.. ++++++.|+.+ ..+.+||..+..-.. ..+......-..+.+ +..+++.|+
T Consensus 102 W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG 176 (308)
T 1zgk_A 102 WSPCAPMSVPRNR-IGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVGG 176 (308)
T ss_dssp EEECCCCSSCCBT-CEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECC
T ss_pred EeECCCCCcCccc-cEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEeC
Confidence 1 1111111111 122222 56666777643 357788876542111 011111111111222 335666666
Q ss_pred CC-----CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-----CeEEEEeCCCCeEEEEec--cc
Q 047355 165 LD-----GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-----FTVKVWDYETKTCVQILE--GH 230 (312)
Q Consensus 165 ~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~--~h 230 (312)
.+ ..+.+||+.+..-... +........+ . .. ++.+++.|+.+ ..+.+||+.+.+-...-. ..
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~--~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGV-C--VL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE-E--EE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceE-E--EE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 54 3588888876532211 1111111111 1 12 45666777654 468999998776544321 11
Q ss_pred ccCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCc
Q 047355 231 TNNVTAVCFHPELRIIITASED-----GTILIWNATTF 263 (312)
Q Consensus 231 ~~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~ 263 (312)
......+. -++++++.|+.+ ..+.+||..+.
T Consensus 253 r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 253 RSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 11222222 256777777754 34777887653
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.54 E-value=0.025 Score=46.34 Aligned_cols=202 Identities=10% Similarity=0.092 Sum_probs=96.6
Q ss_pred CeEEEEEccCcee--eeeecccccceeEEEEecCCCEEEEEeCC-----CcEEEEeCCCCc----eeeeEecCCccceEE
Q 047355 81 KFIRVFDYNTMAS--VKEFEAHEDYIRSLAVHPTFPFVLTASDD-----KLIKLWDWEKNW----ECTQTFEGHSHYVMQ 149 (312)
Q Consensus 81 g~i~iwd~~~~~~--~~~~~~h~~~i~~~~~~~~~~~l~t~s~d-----~~v~iwd~~~~~----~~~~~~~~~~~~v~~ 149 (312)
..+..||..+.+- +..+...... .+++. .++.+++.|+.+ ..+.+||..+.. .....+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRY-VASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhcc-ccEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 4678888776531 1111111111 12222 346677777755 468888876543 111111111111111
Q ss_pred EEeCCCCCCEEEEEeCC-----CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-----CeEEEEe
Q 047355 150 SAFNPKDLNTFASASLD-----GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-----FTVKVWD 217 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd 217 (312)
+.. +..+++.|+.+ ..+.+||+.+.+-... +........+ . . . ++.+++.|+.+ ..+.+||
T Consensus 109 ~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~-~-~-~~~iyv~GG~~~~~~~~~~~~~d 181 (301)
T 2vpj_A 109 TTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL-V-V-A-SGVIYCLGGYDGLNILNSVEKYD 181 (301)
T ss_dssp EEE---TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE-E-E-E-TTEEEEECCBCSSCBCCCEEEEE
T ss_pred EEE---CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE-E-E-E-CCEEEEECCCCCCcccceEEEEe
Confidence 222 33566666543 3588888876543221 1111111111 1 1 1 45666677654 4588999
Q ss_pred CCCCeEEEEe--cccccCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCcc--eeeecccCccceEEEEEecCCCeE
Q 047355 218 YETKTCVQIL--EGHTNNVTAVCFHPELRIIITASED-----GTILIWNATTFR--LQNTLSSGLERVWSIGYKKGSNQV 288 (312)
Q Consensus 218 ~~~~~~~~~~--~~h~~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 288 (312)
..+.+-...- ......-..+. .++++++.|+.+ ..+.+||..+.+ .+..+......... ...+++.+
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~ 257 (301)
T 2vpj_A 182 PHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA--TVLRGRLY 257 (301)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE--EEETTEEE
T ss_pred CCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE--EEECCEEE
Confidence 8877654432 11111222222 256777787764 468999987643 22222211111112 22366777
Q ss_pred EEEecCC
Q 047355 289 AFGCDNG 295 (312)
Q Consensus 289 ~~~~~~g 295 (312)
+.|+.++
T Consensus 258 v~GG~~~ 264 (301)
T 2vpj_A 258 AIAGYDG 264 (301)
T ss_dssp EECCBCS
T ss_pred EEcCcCC
Confidence 7776543
No 311
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.37 E-value=0.014 Score=57.45 Aligned_cols=231 Identities=16% Similarity=0.213 Sum_probs=132.8
Q ss_pred cCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCc-eeeeeeccc----
Q 047355 26 HPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTM-ASVKEFEAH---- 100 (312)
Q Consensus 26 ~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h---- 100 (312)
||..+.++-=+ ..+++|+|++.....+++...+ +|.--.|.... .|+-.+. ..|..|++... .+.+.+..|
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~-~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~ 149 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLA 149 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCC-eeEEEcC-CeEEEeccCCCCccHHHHhcchhcc
Confidence 56666555443 6889999999887777776655 45555555443 3443333 57999999643 455566666
Q ss_pred ccceeEEEEecCCCEEEEEe-------CCCcEEEEeCCCCceeeeEecCCccceEEEEeC--CCCCCEEEEEeC---CCe
Q 047355 101 EDYIRSLAVHPTFPFVLTAS-------DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFN--PKDLNTFASASL---DGT 168 (312)
Q Consensus 101 ~~~i~~~~~~~~~~~l~t~s-------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~s~s~---dg~ 168 (312)
...|.....+++.+.++..| -.|.+.+|...+. ..+.++||.......... +.....|+-+.. .+.
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~--~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc--cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 34677778888888765322 3578888887653 345567776654433332 222233433322 368
Q ss_pred EEEEEcCCC---cceee-------ecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEE
Q 047355 169 IQIWNMDSS---AAKFT-------LDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVC 238 (312)
Q Consensus 169 v~iwd~~~~---~~~~~-------~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~ 238 (312)
++|-++... .+.+. +++....-..+....++.-..+..-+.-|.|.+||++++.++..-+-...+|-..+
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~ 307 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA 307 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEec
Confidence 999998543 11111 11100011122233455555566677889999999999988765444445555444
Q ss_pred EeCCCcEEEEEeCCCcEEEEeCCC
Q 047355 239 FHPELRIIITASEDGTILIWNATT 262 (312)
Q Consensus 239 ~~~~~~~l~s~s~dg~v~iwd~~~ 262 (312)
.+....=++.....|.|.--.+..
T Consensus 308 ~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 308 PHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred cCCCCCceEEEcCCceEEEEEEcc
Confidence 443322234444556555554443
No 312
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.35 E-value=0.053 Score=53.62 Aligned_cols=254 Identities=11% Similarity=0.136 Sum_probs=141.4
Q ss_pred cCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeecccccceeEEEEecCCCEE
Q 047355 37 YSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFV 116 (312)
Q Consensus 37 ~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l 116 (312)
....|.|-|+........-.. ...++..+|..+.|+.-. ..++.++|+++...++.+.-.+ +|.-=.|-.... |
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~-l 119 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-V 119 (1630)
T ss_pred CCceEEEEECCCCCCcccccc---cchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCe-e
Confidence 334788888876443321111 122344677777666654 6899999999887766665444 343334443333 3
Q ss_pred EEEeCCCcEEEEeCCCCceeeeEecCCc----cceEEEEeCCCCCCEEEEEe------CCCeEEEEEcCCCcceeeeccc
Q 047355 117 LTASDDKLIKLWDWEKNWECTQTFEGHS----HYVMQSAFNPKDLNTFASAS------LDGTIQIWNMDSSAAKFTLDAH 186 (312)
Q Consensus 117 ~t~s~d~~v~iwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~s~s------~dg~v~iwd~~~~~~~~~~~~~ 186 (312)
+-.+ +..|..|++.....+.+.|..|. ..+.....++...-.+++|- ..|.+.+|....... +.+++|
T Consensus 120 ~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegh 197 (1630)
T 1xi4_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGH 197 (1630)
T ss_pred EEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHh
Confidence 3222 46799999976555555555552 34555566664433333332 457888998765422 334555
Q ss_pred ccceeEEEEEEcCC-ceEEEEEeC---CCeEEEEeCCCC---eE------EEEecc---cccCeEEEEEeCCCcEEEEEe
Q 047355 187 EKGINCIDYFITSD-KVYLITGSD---DFTVKVWDYETK---TC------VQILEG---HTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 187 ~~~v~~~~~~~~~~-~~~l~sg~~---dg~i~vwd~~~~---~~------~~~~~~---h~~~i~~l~~~~~~~~l~s~s 250 (312)
......+...-.+. ...++-+.. -+++++-++... .. ...+.. -.+-.-++..++.-..+..-+
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it 277 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 277 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe
Confidence 44332222110111 111221111 257888887432 11 111111 122234677788777888889
Q ss_pred CCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 251 EDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 251 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
.-|.|.++|+.|+..+..-....+.|...+-......++.....|.+.
T Consensus 278 k~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl 325 (1630)
T 1xi4_A 278 KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (1630)
T ss_pred cCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEE
Confidence 999999999999887665555556666665555555555555666543
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.25 E-value=0.069 Score=45.04 Aligned_cols=225 Identities=12% Similarity=0.075 Sum_probs=114.1
Q ss_pred eeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeeec---ccccceeEEEEecC---CCEEEEE-eCC-----CcEEEEe
Q 047355 62 VRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFE---AHEDYIRSLAVHPT---FPFVLTA-SDD-----KLIKLWD 129 (312)
Q Consensus 62 v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~i~~~~~~~~---~~~l~t~-s~d-----~~v~iwd 129 (312)
-..++|.+++++ +.+..+|.|.+++-.+...+..+. ........|+++|+ +..|..+ ... +.|..++
T Consensus 33 P~~ia~~pdG~l-~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~ 111 (352)
T 2ism_A 33 PWALAFLPDGGM-LIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLR 111 (352)
T ss_dssp EEEEEECTTSCE-EEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEE
T ss_pred ceEEEEcCCCeE-EEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEE
Confidence 357889999884 445566999998821111111111 12345788999998 4444433 322 5677777
Q ss_pred CCCCc----ee-eeEec---CCccceEEEEeCCCCCCEEEEEeC-------------CCeEEEEEcCCC-----------
Q 047355 130 WEKNW----EC-TQTFE---GHSHYVMQSAFNPKDLNTFASASL-------------DGTIQIWNMDSS----------- 177 (312)
Q Consensus 130 ~~~~~----~~-~~~~~---~~~~~v~~~~~~~~~~~~~~s~s~-------------dg~v~iwd~~~~----------- 177 (312)
..... +. ...+. ...+....+.|.|.+ .+.++.+. .|.|.-++.+..
T Consensus 112 ~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~ 190 (352)
T 2ism_A 112 HLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRR 190 (352)
T ss_dssp ECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCT
T ss_pred eCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCC
Confidence 65321 11 11122 112233567888854 55555432 256666665531
Q ss_pred --cceeeecccccceeEEEEEEcC-CceEEEEEeCCCe--------EEEEeCCC----------------CeEEEEeccc
Q 047355 178 --AAKFTLDAHEKGINCIDYFITS-DKVYLITGSDDFT--------VKVWDYET----------------KTCVQILEGH 230 (312)
Q Consensus 178 --~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~dg~--------i~vwd~~~----------------~~~~~~~~~h 230 (312)
.......++.. ...++ +++ ++.++++-..... |....... ..+...+..|
T Consensus 191 ~~~~~i~a~G~rn-p~g~a--~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 267 (352)
T 2ism_A 191 GARPEVYSLGHRN-PQGLA--WHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQG 267 (352)
T ss_dssp TSCTTEEEECCSE-ECCCE--ECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCccEEEEcCCC-cccEE--EECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCC
Confidence 11111112221 12223 355 4555554333222 44332111 0112222222
Q ss_pred ccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcce------eeecccCccceEEEEEecCCCeEEEEec
Q 047355 231 TNNVTAVCFHPELRIIITASEDGTILIWNATTFRL------QNTLSSGLERVWSIGYKKGSNQVAFGCD 293 (312)
Q Consensus 231 ~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 293 (312)
.....++| .++.++++.-..+.|...++..... ...+-....++..+++.|||.++++...
T Consensus 268 -~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 268 -FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp -CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred -CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 24567888 5677776666677787777654321 1222233468899999999988877654
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.18 E-value=0.071 Score=43.65 Aligned_cols=201 Identities=10% Similarity=0.136 Sum_probs=93.8
Q ss_pred CeEEEEEccCceeeeee---cccccceeEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceeee-EecCCccceEEEE
Q 047355 81 KFIRVFDYNTMASVKEF---EAHEDYIRSLAVHPTFPFVLTASDD-----KLIKLWDWEKNWECTQ-TFEGHSHYVMQSA 151 (312)
Q Consensus 81 g~i~iwd~~~~~~~~~~---~~h~~~i~~~~~~~~~~~l~t~s~d-----~~v~iwd~~~~~~~~~-~~~~~~~~v~~~~ 151 (312)
..+..||..+.. ...+ ..... -.+++. -++.+++.|+.+ ..+.+||..+..-... .+.........+.
T Consensus 30 ~~~~~~d~~~~~-W~~~~~~p~~r~-~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEER-WHQVAELPSRRC-RAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTTE-EEEECCCSSCCB-SCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CcEEEEcCcCCc-EeEcccCCcccc-cceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE
Confidence 357788877653 2222 11111 112222 256677777754 3577888765421111 1111111111122
Q ss_pred eCCCCCCEEEEEeCCC-----eEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-------CeEEEEe
Q 047355 152 FNPKDLNTFASASLDG-----TIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-------FTVKVWD 217 (312)
Q Consensus 152 ~~~~~~~~~~s~s~dg-----~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-------g~i~vwd 217 (312)
+ +..+++.|+.++ .+.+||+.+..-... +....... +.. .. ++.+++.|+.+ ..+..||
T Consensus 107 ~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~--~~-~~~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 107 L---NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVG--VV-GGLLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp E---TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE--EE-TTEEEEECCEETTTTEECCCEEEEE
T ss_pred E---CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEE--EE-CCEEEEEeCCCCCCCccccEEEEEe
Confidence 2 335666666553 577888876543221 11111111 111 11 45566666542 3588999
Q ss_pred CCCCeEEEE--ecccccCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCcc--eeeecccCccceEEEEEecCCCeE
Q 047355 218 YETKTCVQI--LEGHTNNVTAVCFHPELRIIITASED-----GTILIWNATTFR--LQNTLSSGLERVWSIGYKKGSNQV 288 (312)
Q Consensus 218 ~~~~~~~~~--~~~h~~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 288 (312)
..+.+-... +......-..+. .++++++.|+.+ ..+.+||..+.+ .+..+........ +...+++.+
T Consensus 180 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~--~~~~~~~i~ 255 (302)
T 2xn4_A 180 ATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG--VCAVNGLLY 255 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE--EEEETTEEE
T ss_pred CCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe--EEEECCEEE
Confidence 987765443 221122222222 256778888764 368899987643 2222221111111 122366677
Q ss_pred EEEecCC
Q 047355 289 AFGCDNG 295 (312)
Q Consensus 289 ~~~~~~g 295 (312)
+.|+.++
T Consensus 256 v~GG~~~ 262 (302)
T 2xn4_A 256 VVGGDDG 262 (302)
T ss_dssp EECCBCS
T ss_pred EECCcCC
Confidence 7776544
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.11 E-value=0.087 Score=43.33 Aligned_cols=213 Identities=8% Similarity=0.062 Sum_probs=98.5
Q ss_pred CCcEEEEecC----CCeEEEEEccCceee--eeecccccceeEEEEecCCCEEEEEeC----C-----CcEEEEeCCCCc
Q 047355 70 REHWIVCGSD----DKFIRVFDYNTMASV--KEFEAHEDYIRSLAVHPTFPFVLTASD----D-----KLIKLWDWEKNW 134 (312)
Q Consensus 70 ~~~~l~~g~~----dg~i~iwd~~~~~~~--~~~~~h~~~i~~~~~~~~~~~l~t~s~----d-----~~v~iwd~~~~~ 134 (312)
++..++.|+. -..+.+||..+.+-. ..+...... .+++. .++.+++.|+. + ..+.+||..+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3445555552 246788887765311 111111111 12222 25566677765 2 457788876542
Q ss_pred ee-eeEecCCccceEEEEeCCCCCCEEEEEeCC-----CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEE
Q 047355 135 EC-TQTFEGHSHYVMQSAFNPKDLNTFASASLD-----GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLIT 206 (312)
Q Consensus 135 ~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~s 206 (312)
-. ...+.........+.+ +..+++.|+.+ ..+.+||+.+..-... +....... +.. . . ++.+++.
T Consensus 102 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~-~-~~~iyv~ 174 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVA-V-L-NRLLYAV 174 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEE-E-E-TTEEEEE
T ss_pred EeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEE-E-E-CCEEEEE
Confidence 11 1111111111111222 23456665543 3578888876542221 11111111 111 1 1 4566666
Q ss_pred EeCC-----CeEEEEeCCCCeEEEEe--cccccCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCcc--eeeecccC
Q 047355 207 GSDD-----FTVKVWDYETKTCVQIL--EGHTNNVTAVCFHPELRIIITASED-----GTILIWNATTFR--LQNTLSSG 272 (312)
Q Consensus 207 g~~d-----g~i~vwd~~~~~~~~~~--~~h~~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~~--~~~~~~~~ 272 (312)
|+.+ ..+..||..+.+-...- ......-..+.+ ++++++.|+.+ ..+.+||+.+.+ .+..+...
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 6654 45889998877544321 111222222232 66777787764 568999987643 22222211
Q ss_pred ccceEEEEEecCCCeEEEEecCC
Q 047355 273 LERVWSIGYKKGSNQVAFGCDNG 295 (312)
Q Consensus 273 ~~~v~~~~~~~~~~~l~~~~~~g 295 (312)
......+ .-+++.++.|+.++
T Consensus 253 r~~~~~~--~~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 253 RSALGIT--VHQGRIYVLGGYDG 273 (308)
T ss_dssp CBSCEEE--EETTEEEEECCBCS
T ss_pred ccceEEE--EECCEEEEEcCcCC
Confidence 1111112 23667777776543
No 316
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.94 E-value=0.13 Score=42.66 Aligned_cols=198 Identities=10% Similarity=0.074 Sum_probs=110.4
Q ss_pred EEEEEcCCCCeEEEEe-cCCeEEEEeccCCceeeeEEecC--------CceeEEEE---eeCCcEEEEec----------
Q 047355 21 KSVDFHPTQPWVLASL-YSGTVCIWNYHSQTTEKSVKVTD--------SPVRTAKF---VAREHWIVCGS---------- 78 (312)
Q Consensus 21 ~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~--------~~v~~~~~---~~~~~~l~~g~---------- 78 (312)
-+++|++....++.+. ..|+|..|+...+..... .... .....+.+ .+++.++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 3578988655555554 799999999875433322 2111 12456777 46766655433
Q ss_pred ---CCCeEEEEEcc---Cceeeeeec--ccc-----------cceeEEEEecCCCEEEEEeCC-CcEEEEeCCCCceeee
Q 047355 79 ---DDKFIRVFDYN---TMASVKEFE--AHE-----------DYIRSLAVHPTFPFVLTASDD-KLIKLWDWEKNWECTQ 138 (312)
Q Consensus 79 ---~dg~i~iwd~~---~~~~~~~~~--~h~-----------~~i~~~~~~~~~~~l~t~s~d-~~v~iwd~~~~~~~~~ 138 (312)
.+..|..||+. +++...... ... .....+++.++|+.-++++.- +.|...+.........
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26789999998 665443322 111 247899999999988888877 7666665443211111
Q ss_pred EecC----CccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc-eeeec--ccc---cceeEEEEEEcCCceE-EEEE
Q 047355 139 TFEG----HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA-KFTLD--AHE---KGINCIDYFITSDKVY-LITG 207 (312)
Q Consensus 139 ~~~~----~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~-~~~~~--~~~---~~v~~~~~~~~~~~~~-l~sg 207 (312)
.... .......+.++|.+ ..|++....|.+..+|+++... ...+. +.. .....+ .-...+|.. +++.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgi-lp~~~~G~vllV~~ 252 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKI-VTVPVGNESVLVGA 252 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEE-EEEEETTEEEEEEE
T ss_pred eecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccc-cccccCCEEEEEEc
Confidence 1111 11123467888854 5555554599999999884322 01111 211 112222 112234555 6666
Q ss_pred eCCCeEEEEeCCCC
Q 047355 208 SDDFTVKVWDYETK 221 (312)
Q Consensus 208 ~~dg~i~vwd~~~~ 221 (312)
...+.+.+.+....
T Consensus 253 ~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 253 RAPYAISFRSWDNW 266 (334)
T ss_dssp ETTEEEEEECSSTT
T ss_pred CCCCEEEEECCCCc
Confidence 66666666665443
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.91 E-value=0.13 Score=42.13 Aligned_cols=209 Identities=9% Similarity=0.024 Sum_probs=99.1
Q ss_pred EEEEecC--CCeEEEEEccCcee--eeeecccccceeEEEEecCCCEEEEEeCC----CcEEEEeCCCCceee-eEecCC
Q 047355 73 WIVCGSD--DKFIRVFDYNTMAS--VKEFEAHEDYIRSLAVHPTFPFVLTASDD----KLIKLWDWEKNWECT-QTFEGH 143 (312)
Q Consensus 73 ~l~~g~~--dg~i~iwd~~~~~~--~~~~~~h~~~i~~~~~~~~~~~l~t~s~d----~~v~iwd~~~~~~~~-~~~~~~ 143 (312)
.++.|+. ...+..||..+.+= +..+...... .+++. -++.+++.|+.+ ..+.+||..+..-.. ..+...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4445554 35788888876531 1111111111 12222 255667777755 567788876542211 111111
Q ss_pred ccceEEEEeCCCCCCEEEEEeCC------CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeC------
Q 047355 144 SHYVMQSAFNPKDLNTFASASLD------GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSD------ 209 (312)
Q Consensus 144 ~~~v~~~~~~~~~~~~~~s~s~d------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~------ 209 (312)
......+.. +..+++.|+.+ ..+.+||..+..-... +.......... .. ++.+++.|+.
T Consensus 92 r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~---~~-~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 92 RDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV---EA-NGLIYVCGGSLGNNVS 164 (306)
T ss_dssp CBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE---EE-TTEEEEECCEESCTTT
T ss_pred ccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE---EE-CCEEEEECCCCCCCCc
Confidence 111111122 33566666655 3588889877643221 11111111111 11 4555666653
Q ss_pred ---CCeEEEEeCCCCeEEEEec--ccccCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCcc--eeeecccCccceE
Q 047355 210 ---DFTVKVWDYETKTCVQILE--GHTNNVTAVCFHPELRIIITASED-----GTILIWNATTFR--LQNTLSSGLERVW 277 (312)
Q Consensus 210 ---dg~i~vwd~~~~~~~~~~~--~h~~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~~--~~~~~~~~~~~v~ 277 (312)
-..+.+||..+.+-...-. .....-..+.+ ++++++.|+.+ ..+.+||..+.+ .+..+........
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK 242 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee
Confidence 3458899998876544322 11111222222 56777777654 458889987643 2222222212222
Q ss_pred EEEEecCCCeEEEEecC
Q 047355 278 SIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 278 ~~~~~~~~~~l~~~~~~ 294 (312)
++. -+++.++.|+.+
T Consensus 243 ~~~--~~~~i~v~GG~~ 257 (306)
T 3ii7_A 243 CAA--VGSIVYVLAGFQ 257 (306)
T ss_dssp EEE--ETTEEEEEECBC
T ss_pred EEE--ECCEEEEEeCcC
Confidence 222 266777777654
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.84 E-value=0.15 Score=41.94 Aligned_cols=218 Identities=6% Similarity=-0.016 Sum_probs=103.1
Q ss_pred EEEEecCCeEEEEeccCCceeeeEEec--CCceeEEEEeeCCcEEEEecC-----C------CeEEEEEccCceeeeeec
Q 047355 32 VLASLYSGTVCIWNYHSQTTEKSVKVT--DSPVRTAKFVAREHWIVCGSD-----D------KFIRVFDYNTMASVKEFE 98 (312)
Q Consensus 32 l~~~~~dg~v~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~g~~-----d------g~i~iwd~~~~~~~~~~~ 98 (312)
++.|+ ..+.+||..+.+-.. .... ...........++..++.|+. . ..+..||..+.+= +.+.
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EECC
T ss_pred EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EECC
Confidence 33444 578889987765432 2221 122333333446677777763 1 1267788776531 2221
Q ss_pred cccc--ceeEEEEecCCCEEEEEeCC--------CcEEEEeCCCCcee-eeEecCCccceEEEEeCCCCCCEEEEEeC-C
Q 047355 99 AHED--YIRSLAVHPTFPFVLTASDD--------KLIKLWDWEKNWEC-TQTFEGHSHYVMQSAFNPKDLNTFASASL-D 166 (312)
Q Consensus 99 ~h~~--~i~~~~~~~~~~~l~t~s~d--------~~v~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~s~-d 166 (312)
.-.. .-.+++.. ++.+++.|+.+ ..+.+||..+..-. ...+......-..+.. +..+++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 159 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGS 159 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCT
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCC
Confidence 1000 01122222 55666777742 45788887654211 1111111111111122 3356666665 2
Q ss_pred -----CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCCC-----eEEEEeCCCCeEEEEec--cccc
Q 047355 167 -----GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDDF-----TVKVWDYETKTCVQILE--GHTN 232 (312)
Q Consensus 167 -----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~--~h~~ 232 (312)
..+.+||..+..-... +........+. .. ++.+++.|+.++ .+.+||.++.+-...-. ....
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~---~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 235 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT---VH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS 235 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE---EE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB
T ss_pred CCcccceEEEEeCCCCeEEECCCCCCchhceEEE---EE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 3688889876532211 11111111111 12 456666666544 58899998775544322 1112
Q ss_pred CeEEEEEeCCCcEEEEEeCCC--------------cEEEEeCCCc
Q 047355 233 NVTAVCFHPELRIIITASEDG--------------TILIWNATTF 263 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg--------------~v~iwd~~~~ 263 (312)
....+. -++++++.|+.++ .+.+||..+.
T Consensus 236 ~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 236 SLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp SCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred ceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 222222 2567777777642 3667787653
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.63 E-value=0.25 Score=41.58 Aligned_cols=231 Identities=10% Similarity=0.085 Sum_probs=116.4
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCce--eeeE----EecCCceeEEEEeeC---CcEEEEec-C-------
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTT--EKSV----KVTDSPVRTAKFVAR---EHWIVCGS-D------- 79 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~g~-~------- 79 (312)
-..-..|+|.|+|++|+++...|.|++++.+.... ...+ .........++++|+ +.+|+... .
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 35678999999998566677789999998543211 1111 112334578899985 45555442 2
Q ss_pred CCeEEEEEccCc----eeeee----ec---ccccceeEEEEecCCCEEEEEeCC-------------CcEEEEeCCCCce
Q 047355 80 DKFIRVFDYNTM----ASVKE----FE---AHEDYIRSLAVHPTFPFVLTASDD-------------KLIKLWDWEKNWE 135 (312)
Q Consensus 80 dg~i~iwd~~~~----~~~~~----~~---~h~~~i~~~~~~~~~~~l~t~s~d-------------~~v~iwd~~~~~~ 135 (312)
...|..|++... ...+. +. .....-..++|.|++.+.++.+.. |.|.-.+......
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666665432 11111 11 111124579999999766654432 3455555432100
Q ss_pred -----------eeeEe-cCCccceEEEEeCCCCCCEEEEEeC-CCeEEEEEcCCCc------------------------
Q 047355 136 -----------CTQTF-EGHSHYVMQSAFNPKDLNTFASASL-DGTIQIWNMDSSA------------------------ 178 (312)
Q Consensus 136 -----------~~~~~-~~~~~~v~~~~~~~~~~~~~~s~s~-dg~v~iwd~~~~~------------------------ 178 (312)
....+ .++ .....++|+|..+.++++-.. ++.=.|.-+..+.
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 01111 222 234677888744444443221 1111221111110
Q ss_pred -------ceeeecccccceeEEEEEEc-----CCceEEEEEeCCCeEEEEeCCCCeEEEE---ecccccCeEEEEEeCCC
Q 047355 179 -------AKFTLDAHEKGINCIDYFIT-----SDKVYLITGSDDFTVKVWDYETKTCVQI---LEGHTNNVTAVCFHPEL 243 (312)
Q Consensus 179 -------~~~~~~~~~~~v~~~~~~~~-----~~~~~l~sg~~dg~i~vwd~~~~~~~~~---~~~h~~~i~~l~~~~~~ 243 (312)
+...+..| .....+.+... .++.++++.-..+.|...++..++.... +......+..+++.|++
T Consensus 256 ~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 256 IVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp SCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 01111111 12333333211 2467777777778888887765543322 22233478999999999
Q ss_pred cEEEEE
Q 047355 244 RIIITA 249 (312)
Q Consensus 244 ~~l~s~ 249 (312)
.++++.
T Consensus 335 ~lyv~t 340 (353)
T 2g8s_A 335 YLYVLT 340 (353)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 866643
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.58 E-value=0.28 Score=41.36 Aligned_cols=183 Identities=12% Similarity=0.079 Sum_probs=95.8
Q ss_pred eeEEEEecCCCEEEEE------------eCCCcEEEEeCCCCce--eeeEecC-----CccceEEEEeCC--CCC-CEEE
Q 047355 104 IRSLAVHPTFPFVLTA------------SDDKLIKLWDWEKNWE--CTQTFEG-----HSHYVMQSAFNP--KDL-NTFA 161 (312)
Q Consensus 104 i~~~~~~~~~~~l~t~------------s~d~~v~iwd~~~~~~--~~~~~~~-----~~~~v~~~~~~~--~~~-~~~~ 161 (312)
..++.+.|++..++++ ..+|.|.++|.+.... ....+.+ ..-....+.+.+ .+. .+++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3456666766544443 2688999999763211 1112222 111223333322 122 2444
Q ss_pred EEeC--CCeEEEEEcCCCccee----eecccc-cceeEEEEEEcCCceEEEEEe-----------------CCCeEEEEe
Q 047355 162 SASL--DGTIQIWNMDSSAAKF----TLDAHE-KGINCIDYFITSDKVYLITGS-----------------DDFTVKVWD 217 (312)
Q Consensus 162 s~s~--dg~v~iwd~~~~~~~~----~~~~~~-~~v~~~~~~~~~~~~~l~sg~-----------------~dg~i~vwd 217 (312)
+... +.+|.+|+++...... .+.+.. ...+.+ ...++|.+.++.. ..|.|.-+|
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~--~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDI--VAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEE--EEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceE--EEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 4333 4678888776543221 222211 223433 4566788777654 124566666
Q ss_pred CCCCeEEEEecccccCeEEEEEeCCCcEEEEEe-CCCcEEEEeCCC-cce--eeecccCccceEEEEEec-CCCeEEEEe
Q 047355 218 YETKTCVQILEGHTNNVTAVCFHPELRIIITAS-EDGTILIWNATT-FRL--QNTLSSGLERVWSIGYKK-GSNQVAFGC 292 (312)
Q Consensus 218 ~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s-~dg~v~iwd~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 292 (312)
.. +...... .-..-+.++|+||++.|..+. ..+.|..|++.. +++ ...+ ......-.+++.+ +|+..+++.
T Consensus 210 ~~--~~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 210 PN--DVRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp TT--CCEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred CC--eEEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 53 2222222 233568999999997766554 567899999753 332 1222 2234566777888 588877654
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.51 E-value=0.3 Score=40.93 Aligned_cols=94 Identities=5% Similarity=-0.087 Sum_probs=44.6
Q ss_pred CCCeEEEEecC-CeEEEEeccC--CceeeeEEec-CCceeEEEEeeCCcEEEEecC-C---------CeEEEEEccCce-
Q 047355 28 TQPWVLASLYS-GTVCIWNYHS--QTTEKSVKVT-DSPVRTAKFVAREHWIVCGSD-D---------KFIRVFDYNTMA- 92 (312)
Q Consensus 28 ~~~~l~~~~~d-g~v~iw~~~~--~~~~~~~~~~-~~~v~~~~~~~~~~~l~~g~~-d---------g~i~iwd~~~~~- 92 (312)
++...+.|+.+ ..+.++|+.. .+-...-... ..........-++..++.|+. + ..+.+||..+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 56666666654 4677888763 2222111112 111222222335666666665 2 468888887653
Q ss_pred -eeeeecccccceeEEEEecCCCEEEEEeCC
Q 047355 93 -SVKEFEAHEDYIRSLAVHPTFPFVLTASDD 122 (312)
Q Consensus 93 -~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d 122 (312)
.+..+......-.+++. .++++++.|+.+
T Consensus 99 ~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp EECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred EECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 11111101111112222 466777888765
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.47 E-value=0.21 Score=38.83 Aligned_cols=150 Identities=8% Similarity=0.031 Sum_probs=82.7
Q ss_pred ceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccccc--------eeEEEEEEcCCceEEEEEeCCCeEEEEe
Q 047355 146 YVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHEKG--------INCIDYFITSDKVYLITGSDDFTVKVWD 217 (312)
Q Consensus 146 ~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~l~sg~~dg~i~vwd 217 (312)
.+..++|+| ++.+.++ .+|.+.-.+..+.....-+.. ... ...+ .+.++|.+.++ .||.|+-++
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~--~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFL--FFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEE--EECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCccccccc-ccEecccccccceEE--EECCCCCEEEe--CCCEEEEeC
Confidence 455889999 5555555 778776666544322111100 111 2333 46788887776 569998887
Q ss_pred CCCCeE-------EEEecccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcc------eeeecc-cCccceEEEEEec
Q 047355 218 YETKTC-------VQILEGHTNNVTAVCFHPELRIIITASEDGTILIWNATTFR------LQNTLS-SGLERVWSIGYKK 283 (312)
Q Consensus 218 ~~~~~~-------~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~------~~~~~~-~~~~~v~~~~~~~ 283 (312)
--+... ...-..-=..+..|.|.|++.+.+.. |+.++-+...+.. ....+. ..-..-..+.|.+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 532110 11111111468999999999877766 7775444333211 111122 2222344466888
Q ss_pred CCCeEEEEecCCeEEEEeccCCCC
Q 047355 284 GSNQVAFGCDNGTLIVKIGNSSGC 307 (312)
Q Consensus 284 ~~~~l~~~~~~g~i~v~~~~~~~~ 307 (312)
++...+.. +|.++-..+.+-.|
T Consensus 192 ~G~l~~v~--~g~~Y~~~~p~~~~ 213 (236)
T 1tl2_A 192 VGTLFGVQ--GGKFYEDYPPSYAY 213 (236)
T ss_dssp TSCEEEEE--TTEEEEESCCCSTT
T ss_pred CCcEEEEe--CCeEEecCCccccC
Confidence 88888876 88777554443333
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.29 E-value=0.42 Score=40.25 Aligned_cols=152 Identities=8% Similarity=0.165 Sum_probs=86.0
Q ss_pred EEEEEcCCCCeEEEEe------------cCCeEEEEeccCC-ceeeeEEecC-------CceeEEEEee--CCc-EEEEe
Q 047355 21 KSVDFHPTQPWVLASL------------YSGTVCIWNYHSQ-TTEKSVKVTD-------SPVRTAKFVA--REH-WIVCG 77 (312)
Q Consensus 21 ~~~~~~~~~~~l~~~~------------~dg~v~iw~~~~~-~~~~~~~~~~-------~~v~~~~~~~--~~~-~l~~g 77 (312)
-.++..|+|..+++++ .+|.|.++|+.+. .....+.... ..-..+.+.+ ++. +|+.+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 4556788875544441 6899999998732 1122333222 2334455555 343 45444
Q ss_pred c---CCCeEEEEEccCce----eeeeeccc-ccceeEEEEecCCCEEEEEe-----------------CCCcEEEEeCCC
Q 047355 78 S---DDKFIRVFDYNTMA----SVKEFEAH-EDYIRSLAVHPTFPFVLTAS-----------------DDKLIKLWDWEK 132 (312)
Q Consensus 78 ~---~dg~i~iwd~~~~~----~~~~~~~h-~~~i~~~~~~~~~~~l~t~s-----------------~d~~v~iwd~~~ 132 (312)
. .+.+|.+|+++... .+..+++. -...+++.+.+++.+.++.. ..|.+..+|..
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~- 211 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN- 211 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-
Confidence 2 25678888775432 22333322 13467899999998877654 12344445432
Q ss_pred CceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCC
Q 047355 133 NWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDS 176 (312)
Q Consensus 133 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~ 176 (312)
. .......-.....++|+|.+..+.++-+..+.|..|+++.
T Consensus 212 --~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 212 --D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp --C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred --e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1 1122222234577899996555566667788999999874
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.26 E-value=0.73 Score=42.72 Aligned_cols=196 Identities=12% Similarity=0.074 Sum_probs=96.2
Q ss_pred CCCCeEEEEecC----CeEEEEeccCCceeeeE-E-----ecCCce-eEEEEee-CCcEEEEecCC------CeEEEEEc
Q 047355 27 PTQPWVLASLYS----GTVCIWNYHSQTTEKSV-K-----VTDSPV-RTAKFVA-REHWIVCGSDD------KFIRVFDY 88 (312)
Q Consensus 27 ~~~~~l~~~~~d----g~v~iw~~~~~~~~~~~-~-----~~~~~v-~~~~~~~-~~~~l~~g~~d------g~i~iwd~ 88 (312)
.++..++.|+.+ ..+.+||..+.+....- . ...... .++.... ++..++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 355666677754 35778887765443222 1 111111 2233333 66777777643 35788888
Q ss_pred cCce--eeeeecccccceeEEEEecCCCEEEEEeCCC--cEEEEeCCCCceeeeEe----cCCccceEEEEeCCCCCCEE
Q 047355 89 NTMA--SVKEFEAHEDYIRSLAVHPTFPFVLTASDDK--LIKLWDWEKNWECTQTF----EGHSHYVMQSAFNPKDLNTF 160 (312)
Q Consensus 89 ~~~~--~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~--~v~iwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~ 160 (312)
.+.. .+..+... ..-.+++...++.+++.|+.++ .+.+||..+........ ......-..+.+......++
T Consensus 476 ~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 7643 22111111 1112233324778888887655 68889876543211110 00011111133333324566
Q ss_pred EEEeC--C-----CeEEEEEcCCCcc-----eeeecc--cccceeEEEEEEcCCceEEEEEeC--------CCeEEEEeC
Q 047355 161 ASASL--D-----GTIQIWNMDSSAA-----KFTLDA--HEKGINCIDYFITSDKVYLITGSD--------DFTVKVWDY 218 (312)
Q Consensus 161 ~s~s~--d-----g~v~iwd~~~~~~-----~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~--------dg~i~vwd~ 218 (312)
+.|+. + ..+..||+.+..- -..+.. .......... ...++.+++.|+. ...|.+||.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 66765 2 3588999987761 111111 1111111111 1222566666664 346999999
Q ss_pred CCCeEE
Q 047355 219 ETKTCV 224 (312)
Q Consensus 219 ~~~~~~ 224 (312)
.+.+..
T Consensus 634 ~t~~W~ 639 (695)
T 2zwa_A 634 LSETLT 639 (695)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 887654
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.08 E-value=0.47 Score=38.98 Aligned_cols=218 Identities=9% Similarity=0.027 Sum_probs=99.3
Q ss_pred EEEEecCCeEEEEeccCCceeeeEEec--CCceeEEEEeeCCcEEEEecC----CC-------eEEEEEccCceee--ee
Q 047355 32 VLASLYSGTVCIWNYHSQTTEKSVKVT--DSPVRTAKFVAREHWIVCGSD----DK-------FIRVFDYNTMASV--KE 96 (312)
Q Consensus 32 l~~~~~dg~v~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~g~~----dg-------~i~iwd~~~~~~~--~~ 96 (312)
++.|+. .+..||..+.+-.. .... ...........++..++.|+. ++ .+..||..+.+-. ..
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344443 37888887665433 2221 122223333456677777763 12 1677887664321 11
Q ss_pred ecccccceeEEEEecCCCEEEEEeCC-------CcEEEEeCCCCceeee-EecCCccceEEEEeCCCCCCEEEEEeC---
Q 047355 97 FEAHEDYIRSLAVHPTFPFVLTASDD-------KLIKLWDWEKNWECTQ-TFEGHSHYVMQSAFNPKDLNTFASASL--- 165 (312)
Q Consensus 97 ~~~h~~~i~~~~~~~~~~~l~t~s~d-------~~v~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~s~--- 165 (312)
+..... -.+++.. ++.+++.|+.+ ..+.+||..+..-... .+......-..+.. +..+++.|+.
T Consensus 96 ~p~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~ 170 (318)
T 2woz_A 96 LPSARC-LFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH---NGMIYCLGGKTDD 170 (318)
T ss_dssp BSSCBC-SCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE---TTEEEEECCEESS
T ss_pred CCcccc-ccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE---CCEEEEEcCCCCC
Confidence 111111 1122222 55666777754 2467777765421111 01000000011111 3355566653
Q ss_pred ---CCeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeCC-----CeEEEEeCCCCeEEEE--ecccccC
Q 047355 166 ---DGTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSDD-----FTVKVWDYETKTCVQI--LEGHTNN 233 (312)
Q Consensus 166 ---dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~ 233 (312)
-..+.+||+.+..-... +....... +.. .. ++.+++.|+.+ ..+.+||.++.+-... +......
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~--~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 246 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMF-GVA--IH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS 246 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSC-EEE--EE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccc-eEE--EE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 23588999877642221 11111111 111 12 44556666543 3577899887654432 2111222
Q ss_pred eEEEEEeCCCcEEEEEeCC--------------CcEEEEeCCCc
Q 047355 234 VTAVCFHPELRIIITASED--------------GTILIWNATTF 263 (312)
Q Consensus 234 i~~l~~~~~~~~l~s~s~d--------------g~v~iwd~~~~ 263 (312)
. +++. .++++++.|+.+ ..+.+||..+.
T Consensus 247 ~-~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 247 I-SLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp C-EEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred e-EEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 2 2222 356777777654 34777787653
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.01 E-value=0.51 Score=38.72 Aligned_cols=208 Identities=8% Similarity=-0.016 Sum_probs=97.2
Q ss_pred EEEecCCCeEEEEEccCceee-eeecccccceeEEEEecCCCEEEEEeC-----C------CcEEEEeCCCCcee-eeEe
Q 047355 74 IVCGSDDKFIRVFDYNTMASV-KEFEAHEDYIRSLAVHPTFPFVLTASD-----D------KLIKLWDWEKNWEC-TQTF 140 (312)
Q Consensus 74 l~~g~~dg~i~iwd~~~~~~~-~~~~~h~~~i~~~~~~~~~~~l~t~s~-----d------~~v~iwd~~~~~~~-~~~~ 140 (312)
++.|+ ..+..||..+.+=. ..+..........+...++.+++.|+. . ..+..||..+..-. ....
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 44455 56889998776421 122111112222233346777777873 1 12667776554211 1001
Q ss_pred cCCccceEEEEeCCCCCCEEEEEeCC--------CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeC-
Q 047355 141 EGHSHYVMQSAFNPKDLNTFASASLD--------GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSD- 209 (312)
Q Consensus 141 ~~~~~~v~~~~~~~~~~~~~~s~s~d--------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~- 209 (312)
.........+.. +..+++.|+.+ ..+.+||..+.+-... +......... . . .++.+++.|+.
T Consensus 86 p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~--~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 86 PSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTV-L--S-HMDLVYVIGGKG 158 (315)
T ss_dssp SSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEE-E--E-ETTEEEEECCBC
T ss_pred CcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeE-E--E-ECCEEEEEeCCC
Confidence 100000011122 33556666632 3588889876542211 1111111111 1 1 24556666665
Q ss_pred C-----CeEEEEeCCCCeEEEEec--ccccCeEEEEEeCCCcEEEEEeCCC-----cEEEEeCCCcc--eeeecccCccc
Q 047355 210 D-----FTVKVWDYETKTCVQILE--GHTNNVTAVCFHPELRIIITASEDG-----TILIWNATTFR--LQNTLSSGLER 275 (312)
Q Consensus 210 d-----g~i~vwd~~~~~~~~~~~--~h~~~i~~l~~~~~~~~l~s~s~dg-----~v~iwd~~~~~--~~~~~~~~~~~ 275 (312)
+ ..+.+||..+.+-...-. .....-.++. -++++++.|+.++ .+.+||..+.+ .+..+......
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 2 468999998775443221 1111122222 2667888887654 48888887643 22222222111
Q ss_pred eEEEEEecCCCeEEEEecC
Q 047355 276 VWSIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 276 v~~~~~~~~~~~l~~~~~~ 294 (312)
...+ .-+++.++.|+.+
T Consensus 237 ~~~~--~~~~~l~v~GG~~ 253 (315)
T 4asc_A 237 LSLV--SLVGTLYAIGGFA 253 (315)
T ss_dssp CEEE--EETTEEEEEEEEE
T ss_pred eeEE--EECCEEEEECCcc
Confidence 2222 3366777777764
No 327
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.98 E-value=0.6 Score=39.29 Aligned_cols=226 Identities=12% Similarity=0.044 Sum_probs=116.5
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCce-eeeee---cccccceeEEEEecC---CCEEEEEeC----C----CcE
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA-SVKEF---EAHEDYIRSLAVHPT---FPFVLTASD----D----KLI 125 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~-~~~~~---~~h~~~i~~~~~~~~---~~~l~t~s~----d----~~v 125 (312)
.-..++|.++++ |+.+..+|.|++++. ++. .+..+ .........|+++|+ +..|..+.. + ..|
T Consensus 30 ~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 345788999987 555566699998874 333 22211 112345789999997 444443322 2 456
Q ss_pred EEEeCCCC------ceee-eEec-CCccceEEEEeCCCCCCEEEEEeC-------------CCeEEEEEcCCC-------
Q 047355 126 KLWDWEKN------WECT-QTFE-GHSHYVMQSAFNPKDLNTFASASL-------------DGTIQIWNMDSS------- 177 (312)
Q Consensus 126 ~iwd~~~~------~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~s~s~-------------dg~v~iwd~~~~------- 177 (312)
..|+.... .+.+ ..+. ...+....+.|.|. +.+.++.+. .|.|.-++.+..
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTT-SCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCC-CcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 66765432 1111 1121 11123345778874 455555332 245655555432
Q ss_pred -cceeeecccccceeEEEEEEcC-CceEEEEEeCCC---eEEEEeCCC----------------CeEEEEecccccCeEE
Q 047355 178 -AAKFTLDAHEKGINCIDYFITS-DKVYLITGSDDF---TVKVWDYET----------------KTCVQILEGHTNNVTA 236 (312)
Q Consensus 178 -~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~dg---~i~vwd~~~----------------~~~~~~~~~h~~~i~~ 236 (312)
.......++..+ .-++ +++ ++.++++-.... .|.+..... ..++..+.........
T Consensus 187 ~~~~i~a~G~rnp-~Gla--~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 187 PNSPIWSYGHRNP-QGID--WHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp TTCCEEEECCSCC-CEEE--ECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCcEEEEccCCc-ceEE--EeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 111111223222 2233 455 455554433221 244332110 0112222111234678
Q ss_pred EEEe-------CCCcEEEEEeCCCcEEEEeCCCc-cee--ee-cccCccceEEEEEecCCCeEEEEe
Q 047355 237 VCFH-------PELRIIITASEDGTILIWNATTF-RLQ--NT-LSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 237 l~~~-------~~~~~l~s~s~dg~v~iwd~~~~-~~~--~~-~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
++|. .++.++++.-..+.|...++... +.. .. +.....++..+++.|||.+.++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 8883 56777777777778888887643 221 12 223356899999999998877765
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.74 E-value=1.7 Score=42.73 Aligned_cols=73 Identities=18% Similarity=0.266 Sum_probs=51.0
Q ss_pred cCcEEEEEEcCC------CCeEEEEec-CCeEEEEeccCCceeeeEEecC-CceeEEEEee--CCcEEEEecCCCeEEEE
Q 047355 17 SDRVKSVDFHPT------QPWVLASLY-SGTVCIWNYHSQTTEKSVKVTD-SPVRTAKFVA--REHWIVCGSDDKFIRVF 86 (312)
Q Consensus 17 ~~~i~~~~~~~~------~~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~g~~dg~i~iw 86 (312)
.+.|.++++.|. +++++.|.+ |++|+|++++..+......... ....++.+.. ...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 468999999863 368999997 9999999998765554443322 2333444432 34578899999998777
Q ss_pred Ecc
Q 047355 87 DYN 89 (312)
Q Consensus 87 d~~ 89 (312)
.++
T Consensus 633 ~~d 635 (1158)
T 3ei3_A 633 GLN 635 (1158)
T ss_dssp EEC
T ss_pred EEc
Confidence 654
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.66 Score=38.73 Aligned_cols=191 Identities=13% Similarity=0.031 Sum_probs=94.0
Q ss_pred CeEEEEecCCeEEEEeccCCceeeeEEec-CCceeEEEEe---eCCcEEEEe-cCCCeEEEEEccCceeeeeeccc----
Q 047355 30 PWVLASLYSGTVCIWNYHSQTTEKSVKVT-DSPVRTAKFV---AREHWIVCG-SDDKFIRVFDYNTMASVKEFEAH---- 100 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~v~~~~~~---~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h---- 100 (312)
..++.++.||.|.-.|..+++..-.+... ..+.....-. .++..++.. ..||.|..++.+++.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888999999998888887766555443 1122111100 122333333 68999999998876433222211
Q ss_pred ccceeE---EEE-e----cCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCcc--c-----eEEEEeC----CCCCCEEE
Q 047355 101 EDYIRS---LAV-H----PTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSH--Y-----VMQSAFN----PKDLNTFA 161 (312)
Q Consensus 101 ~~~i~~---~~~-~----~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~--~-----v~~~~~~----~~~~~~~~ 161 (312)
..++.. ..+ . ..+..+++|+.+|.+.-.|..++ +....+..... . ..+.... ......++
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG-~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG-EIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTC-CEEEEESTTCBCC--------------------CCEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC-cEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 111211 000 0 13456788999999999998776 33344432210 0 0000000 01124566
Q ss_pred EEeCCCeEEEEEcCCCcceeeecc-----cccc--eeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEE
Q 047355 162 SASLDGTIQIWNMDSSAAKFTLDA-----HEKG--INCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQ 225 (312)
Q Consensus 162 s~s~dg~v~iwd~~~~~~~~~~~~-----~~~~--v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 225 (312)
.+..+..+.+.+ ++++ +..+.. .... +.. .+..+.++.+ +.++.||.|..+|..+++.+-
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~-~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLAL-QNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHT-TCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecceEEEEEEC-CCCC-eEEEeccccccccccccccc-ccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 666666666655 3332 221110 0000 000 0000123454 346788888888887777554
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.65 E-value=0.94 Score=39.00 Aligned_cols=143 Identities=16% Similarity=0.171 Sum_probs=83.2
Q ss_pred CCcEEEEecCCCeEEEEEccCceeeeeeccc----ccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc---e-------
Q 047355 70 REHWIVCGSDDKFIRVFDYNTMASVKEFEAH----EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW---E------- 135 (312)
Q Consensus 70 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h----~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~---~------- 135 (312)
++..|+.+- ++.||.-++.....-+.+... -+.|..+..+|+|++|+..+. ..|.|-.+.... .
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccc
Confidence 344444432 356666665533222333222 235788999999999987764 578888876221 0
Q ss_pred -eeeEecC------CccceEEEEeCCCCC--CEEEEEeCCCeEEEEEcCCCcce-eeec---------ccccceeEEEEE
Q 047355 136 -CTQTFEG------HSHYVMQSAFNPKDL--NTFASASLDGTIQIWNMDSSAAK-FTLD---------AHEKGINCIDYF 196 (312)
Q Consensus 136 -~~~~~~~------~~~~v~~~~~~~~~~--~~~~s~s~dg~v~iwd~~~~~~~-~~~~---------~~~~~v~~~~~~ 196 (312)
..+.+.- ....|..+.|+|... ..+++-..|+.||+||+...... ..+. .....+.+++
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~-- 186 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE-- 186 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE--
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE--
Confidence 0112211 246789999999764 48999999999999999852211 1221 1113344444
Q ss_pred EcCCceEEEE--EeCCCeEEEE
Q 047355 197 ITSDKVYLIT--GSDDFTVKVW 216 (312)
Q Consensus 197 ~~~~~~~l~s--g~~dg~i~vw 216 (312)
+.+++-.|.. .+..|.|+..
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 4555554444 4477777654
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.51 E-value=0.93 Score=38.00 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=115.8
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeE------EecCCceeEEEEeeC---CcEEEEe---cCC
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV------KVTDSPVRTAKFVAR---EHWIVCG---SDD 80 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~------~~~~~~v~~~~~~~~---~~~l~~g---~~d 80 (312)
+...-+.-+.|+|.|+|..+++--..|.|++++....+..... .........++++|+ +.+|+.. ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3344467789999999986665544899999986544332111 122445678899884 4445432 244
Q ss_pred CeEEEEEccCc----------ee-eeeec-ccccceeEEEEecCCCEEEEEeC-------------CCcEEEEeCCCCc-
Q 047355 81 KFIRVFDYNTM----------AS-VKEFE-AHEDYIRSLAVHPTFPFVLTASD-------------DKLIKLWDWEKNW- 134 (312)
Q Consensus 81 g~i~iwd~~~~----------~~-~~~~~-~h~~~i~~~~~~~~~~~l~t~s~-------------d~~v~iwd~~~~~- 134 (312)
+.|.-|.+... +. +..+. .....-..|.|.|++.+.++.+. -|.|.-.+.....
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 56666655431 11 11121 11123467999999987776542 2333333432210
Q ss_pred --e---eeeEe-cCCccceEEEEeCCCCCCEEEEE-eCCCeEEEEEcCCCc------------------ceeeecccccc
Q 047355 135 --E---CTQTF-EGHSHYVMQSAFNPKDLNTFASA-SLDGTIQIWNMDSSA------------------AKFTLDAHEKG 189 (312)
Q Consensus 135 --~---~~~~~-~~~~~~v~~~~~~~~~~~~~~s~-s~dg~v~iwd~~~~~------------------~~~~~~~~~~~ 189 (312)
. ....+ .+|.+ ...++|+|. +.++++= +.|+.-.|--+..+. +...+..+..+
T Consensus 187 ~~nPf~~~~i~a~G~RN-p~Gla~dp~-G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 187 PGNPFPGSPVYSYGHRN-VQGLAWDDK-QRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp TTCSSTTCCEEEBCCSB-CCEEEECTT-CCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred CCCCCCCCeEEeeCCCC-cceEEECCC-CCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 0 00111 23333 356778873 4444332 223222222221111 01111111112
Q ss_pred eeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCe----EEEEecccccCeEEEEEeCCCcEEEEEe
Q 047355 190 INCIDYFITSDKVYLITGSDDFTVKVWDYETKT----CVQILEGHTNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 190 v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~i~~l~~~~~~~~l~s~s 250 (312)
..-+.+ . ++..++..-..+.|....+.... ....+.+....++.|+..|||.++++..
T Consensus 265 p~G~~~--~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 265 PSGIAY--A-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEE--E-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcceEE--E-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 223333 2 35555555555566655554332 2334444446788999999987665544
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.29 E-value=0.99 Score=37.01 Aligned_cols=208 Identities=8% Similarity=0.013 Sum_probs=93.3
Q ss_pred EEEecCCCeEEEEEccCceeee-eecccccceeEEEEecCCCEEEEEeC----CC-------cEEEEeCCCCceee-eEe
Q 047355 74 IVCGSDDKFIRVFDYNTMASVK-EFEAHEDYIRSLAVHPTFPFVLTASD----DK-------LIKLWDWEKNWECT-QTF 140 (312)
Q Consensus 74 l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~i~~~~~~~~~~~l~t~s~----d~-------~v~iwd~~~~~~~~-~~~ 140 (312)
++.|+. .+..||..+.+-.. ........-...+...++.+++.|+. ++ .+..||..+..-.. ..+
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 96 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL 96 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB
T ss_pred hhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC
Confidence 444443 37888887654221 11111111122223456677778873 12 16677765432111 011
Q ss_pred cCCccceEEEEeCCCCCCEEEEEeCC-------CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeC--
Q 047355 141 EGHSHYVMQSAFNPKDLNTFASASLD-------GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSD-- 209 (312)
Q Consensus 141 ~~~~~~v~~~~~~~~~~~~~~s~s~d-------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~-- 209 (312)
............ +..+++.|+.+ ..+.+||..+.+-... +......... . . .++.+++.|+.
T Consensus 97 p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~--~-~~~~iyv~GG~~~ 169 (318)
T 2woz_A 97 PSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNV-I--S-HNGMIYCLGGKTD 169 (318)
T ss_dssp SSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEE-E--E-ETTEEEEECCEES
T ss_pred CccccccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEE-E--E-ECCEEEEEcCCCC
Confidence 110111111122 33566666653 2478888876543221 1111111111 1 1 24556666653
Q ss_pred ----CCeEEEEeCCCCeEEEEe--cccccCeEEEEEeCCCcEEEEEeCC-----CcEEEEeCCCcc--eeeecccCccce
Q 047355 210 ----DFTVKVWDYETKTCVQIL--EGHTNNVTAVCFHPELRIIITASED-----GTILIWNATTFR--LQNTLSSGLERV 276 (312)
Q Consensus 210 ----dg~i~vwd~~~~~~~~~~--~~h~~~i~~l~~~~~~~~l~s~s~d-----g~v~iwd~~~~~--~~~~~~~~~~~v 276 (312)
-..+.+||..+.+-...- ......-..+. -++++++.|+.+ ..+.+||..+.+ .+..+.......
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 247 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI 247 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce
Confidence 235899999887654432 11112222222 256777777754 347788887643 222222111111
Q ss_pred EEEEEecCCCeEEEEecC
Q 047355 277 WSIGYKKGSNQVAFGCDN 294 (312)
Q Consensus 277 ~~~~~~~~~~~l~~~~~~ 294 (312)
.. ...+++.++.|+.+
T Consensus 248 ~~--~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 248 SL--VSLAGSLYAIGGFA 263 (318)
T ss_dssp EE--EEETTEEEEECCBC
T ss_pred EE--EEECCEEEEECCee
Confidence 11 22356666666654
No 333
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.19 E-value=1.4 Score=38.01 Aligned_cols=143 Identities=12% Similarity=0.114 Sum_probs=89.7
Q ss_pred CCCCeEEEEecCCeEEEEeccCCceeeeEEec----CCceeEEEEeeCCcEEEEecCCCeEEEEEccCce----------
Q 047355 27 PTQPWVLASLYSGTVCIWNYHSQTTEKSVKVT----DSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMA---------- 92 (312)
Q Consensus 27 ~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------- 92 (312)
.+|..++.+ .++.||.-++.....-+.+... -..+..+..+++|.+|+..+. ..|.+-.+....
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 345444433 3477888787654444555544 125788999999999988765 477887765211
Q ss_pred --eeeeecc------cccceeEEEEecCC---CEEEEEeCCCcEEEEeCCCCceeeeEec---------CCccceEEEEe
Q 047355 93 --SVKEFEA------HEDYIRSLAVHPTF---PFVLTASDDKLIKLWDWEKNWECTQTFE---------GHSHYVMQSAF 152 (312)
Q Consensus 93 --~~~~~~~------h~~~i~~~~~~~~~---~~l~t~s~d~~v~iwd~~~~~~~~~~~~---------~~~~~v~~~~~ 152 (312)
..+.+.- ...+|..+.|||-+ ..|++-..|+.|++||+.........+. .....+.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 1112221 24679999999964 5789999999999999976322111221 22245677888
Q ss_pred CCCCCCEEEEEe--CCCeEEEE
Q 047355 153 NPKDLNTFASAS--LDGTIQIW 172 (312)
Q Consensus 153 ~~~~~~~~~s~s--~dg~v~iw 172 (312)
.+ ++-.+...+ ..|.|+..
T Consensus 188 g~-~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SK-DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CT-TSSCEEEEECTTSCEEEEE
T ss_pred cC-CCcEEEEEecCCCCCEEEE
Confidence 87 444455544 67777543
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.77 E-value=1.5 Score=36.48 Aligned_cols=124 Identities=6% Similarity=-0.011 Sum_probs=56.1
Q ss_pred CeEEEEEcCCCcceee--ecccccceeEEEEEEcCCceEEEEEeC------CCeEEEEeC--CCCeEEEE--ecccccCe
Q 047355 167 GTIQIWNMDSSAAKFT--LDAHEKGINCIDYFITSDKVYLITGSD------DFTVKVWDY--ETKTCVQI--LEGHTNNV 234 (312)
Q Consensus 167 g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~------dg~i~vwd~--~~~~~~~~--~~~h~~~i 234 (312)
..+.+||..+..-... +......-.++. .. ++.+++.|+. ...+..||+ .+.+-... +.......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~--~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVV--NK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEE--EE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEE--EE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 4788999877643221 111111101221 12 4455555553 345777876 44443322 11111111
Q ss_pred EEEEEeCCCcEEEEEeCC----------------------CcEEEEeCCCc--ceeeecccCccceEEEEEecCCCeEEE
Q 047355 235 TAVCFHPELRIIITASED----------------------GTILIWNATTF--RLQNTLSSGLERVWSIGYKKGSNQVAF 290 (312)
Q Consensus 235 ~~l~~~~~~~~l~s~s~d----------------------g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~ 290 (312)
...+...++++++.|+.+ ..+.+||+.+. +.+..+...... ..+...+++.++.
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~ 322 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLII 322 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEE
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEE
Confidence 111223356777777732 24778887753 333333322222 2223457788888
Q ss_pred EecCC
Q 047355 291 GCDNG 295 (312)
Q Consensus 291 ~~~~g 295 (312)
|+.++
T Consensus 323 GG~~~ 327 (357)
T 2uvk_A 323 GGETA 327 (357)
T ss_dssp EEECG
T ss_pred eeeCC
Confidence 88543
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.41 E-value=0.34 Score=37.73 Aligned_cols=96 Identities=8% Similarity=0.037 Sum_probs=59.5
Q ss_pred EEcCCceEEEEEeCCCeEEEEeCCCCeE------EEEec--ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCccee-
Q 047355 196 FITSDKVYLITGSDDFTVKVWDYETKTC------VQILE--GHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQ- 266 (312)
Q Consensus 196 ~~~~~~~~l~sg~~dg~i~vwd~~~~~~------~~~~~--~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~- 266 (312)
.+.|++.+.+. .+|.++-.+..+... ...+- +... ..++.|.|++.+.++ .||.|+-++-.+..-.
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc
Confidence 35778876666 677777766544211 11110 1111 478999999988777 5699988876431110
Q ss_pred -----eec-ccCccceEEEEEecCCCeEEEEecCCeEE
Q 047355 267 -----NTL-SSGLERVWSIGYKKGSNQVAFGCDNGTLI 298 (312)
Q Consensus 267 -----~~~-~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 298 (312)
..+ ...-..+..|.|.|+|.+-+.. ||.++
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 111 1123567899999999999888 77653
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.20 E-value=0.13 Score=43.10 Aligned_cols=115 Identities=11% Similarity=0.081 Sum_probs=71.7
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceeeecccc-cceeEEEEEEc-CCceEEEEE-eCCCeEEEEeCCCCeEEEEecc----c
Q 047355 158 NTFASASLDGTIQIWNMDSSAAKFTLDAHE-KGINCIDYFIT-SDKVYLITG-SDDFTVKVWDYETKTCVQILEG----H 230 (312)
Q Consensus 158 ~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~-~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~----h 230 (312)
..++.++.||.|.-+|..+++.+.++.... .++.....-.. .++..++.. +.||.|..++.+++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 578999999999999999998888776541 11111100000 123334443 6899999999888754433221 1
Q ss_pred ccCeEE---EEE-e----CCCcEEEEEeCCCcEEEEeCCCcceeeecccC
Q 047355 231 TNNVTA---VCF-H----PELRIIITASEDGTILIWNATTFRLQNTLSSG 272 (312)
Q Consensus 231 ~~~i~~---l~~-~----~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 272 (312)
.+++.. ... . ..+..+++|+.+|.+...|..+++.+.++...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 122221 000 0 14567889999999999999999888776543
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.14 E-value=3.7 Score=38.28 Aligned_cols=261 Identities=11% Similarity=0.132 Sum_probs=134.9
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeE-EecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSV-KVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVK 95 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 95 (312)
...|.+|.-+.+| +|..|..+| +..||-...+..... ......|.++....+ ..|-.|+.+| +..||..+.....
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigT~~G-l~~yd~~~~~f~~ 96 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDN-TYLYMGTDNG-ILVYNYRADRYEQ 96 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETT-TEEEEEETTE-EEEEETTTTEECC
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCC-CcEEEEeCCC-eEEEeCCCCEEEC
Confidence 4579999888887 455666776 455664221110000 011234666554444 4566666665 7889987654322
Q ss_pred eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEec-----CCccceEEEEeCCCCCCEEEEEeCCCeEE
Q 047355 96 EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFE-----GHSHYVMQSAFNPKDLNTFASASLDGTIQ 170 (312)
Q Consensus 96 ~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~s~s~dg~v~ 170 (312)
........|.++.. .++. |-.++.+ .+..+|..... ...+. .....+..+..... ..+..++.+ -+.
T Consensus 97 ~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~--g~lWigt~~-Gl~ 168 (758)
T 3ott_A 97 PETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRK--LTSFDTRRNGLPNNTIYSIIRTKD--NQIYVGTYN-GLC 168 (758)
T ss_dssp CSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCC--EEEECHHHHCCSCSCEEEEEECTT--CCEEEEETT-EEE
T ss_pred cccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCe--EEEeccCCCCcCCCeEEEEEEcCC--CCEEEEeCC-CHh
Confidence 11112234776654 3444 4445555 57778865431 12221 11234555555543 234445554 477
Q ss_pred EEEcCCCcceee-eccc----ccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcE
Q 047355 171 IWNMDSSAAKFT-LDAH----EKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRI 245 (312)
Q Consensus 171 iwd~~~~~~~~~-~~~~----~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~ 245 (312)
.+|..+...... .... ...+.++. ...++..|-.|+. +-+..+|..+++...........|.++...+++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~--~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 245 (758)
T 3ott_A 169 RYIPSNGKFEGIPLPVHSSQSNLFVNSLL--EDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDL 245 (758)
T ss_dssp EEETTTTEEEEECCCCCTTCSSCCEEEEE--EETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCE
T ss_pred hCccCCCceEEecCCCccccccceeEEEE--EECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCE
Confidence 788765543211 1111 11245443 3444332223333 35888998776543322222345888888887775
Q ss_pred EEEEeCCCcEEEEeCCCcceeeecc-------cCccceEEEEEecCCCeEEEEecCC
Q 047355 246 IITASEDGTILIWNATTFRLQNTLS-------SGLERVWSIGYKKGSNQVAFGCDNG 295 (312)
Q Consensus 246 l~s~s~dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~g 295 (312)
.+ |+. +-+.+++..+.+...-.. -....|+++....+|+.-+ |+..|
T Consensus 246 Wi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 246 LA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG 299 (758)
T ss_dssp EE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred EE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc
Confidence 44 444 457888876644322111 1124588887777776554 33456
No 338
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.82 E-value=2.2 Score=34.53 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=109.3
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeeee
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEF 97 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 97 (312)
.+|..++-...- .++-. ||.|..|-....-....-......|..++.-. ...++. . ||.|..|-......+-.-
T Consensus 24 ~~i~~ia~G~~h--~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~-~hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 24 SGVDAIAGGYFH--GLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-YHSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SSCCEEEECSSE--EEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECS-SEEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCCcEEEeCCCe--EEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCC-CEEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 367777765432 23234 99999996543211110001122344444332 223333 4 899999975543221111
Q ss_pred cccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047355 98 EAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSS 177 (312)
Q Consensus 98 ~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~ 177 (312)
..-...|..++......++ -. ||.+..|-.+...+.-.. ......+..+..-. ...+.-. ||.|..|-....
T Consensus 98 ~~~~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~---~~~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGV---YTALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp GGGSSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECS---SEEEEEE-TTEEEEEECCTT
T ss_pred cccCCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEccc---CEEEEEE-CCEEEEecCCCC
Confidence 1113467777765543333 34 899999975432221110 11123355554432 3333344 799999976543
Q ss_pred cceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCCcEEE
Q 047355 178 AAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDGTILI 257 (312)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg~v~i 257 (312)
.....-......+..+. ......++. .||.|+.|-......+..-......|..|+--.....+++ ||.|..
T Consensus 170 gqlg~p~~~~~~v~~i~---~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~ 241 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVA---GGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIA 241 (282)
T ss_dssp STTSCCGGGGSSEEEEE---ECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEE
T ss_pred CCCCCceecCCCeEEEE---ecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEE
Confidence 22211011123344443 233344444 5999999964322111111112245777776554433333 999999
Q ss_pred EeCCCc
Q 047355 258 WNATTF 263 (312)
Q Consensus 258 wd~~~~ 263 (312)
|-....
T Consensus 242 wG~n~~ 247 (282)
T 3qhy_B 242 WGSSRT 247 (282)
T ss_dssp ESTTCC
T ss_pred ecCCCC
Confidence 976553
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.61 E-value=3.4 Score=36.03 Aligned_cols=105 Identities=15% Similarity=0.227 Sum_probs=59.9
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe--------cCCceeEEEEeeC---CcEEEEecC------
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV--------TDSPVRTAKFVAR---EHWIVCGSD------ 79 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--------~~~~v~~~~~~~~---~~~l~~g~~------ 79 (312)
-..-+.|+|.|+|+.+++-...+.|++++...++....... .......++|+|+ +.+|+....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 45678999999998666544445788887644433221111 1345568899985 555554432
Q ss_pred -------CCeEEEEEccCc-------ee-eeeec-ccccceeEEEEecCCCEEEEEeC
Q 047355 80 -------DKFIRVFDYNTM-------AS-VKEFE-AHEDYIRSLAVHPTFPFVLTASD 121 (312)
Q Consensus 80 -------dg~i~iwd~~~~-------~~-~~~~~-~h~~~i~~~~~~~~~~~l~t~s~ 121 (312)
...|.-+++... +. +..+. ........|+|.|++.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 11 11121 11234688999999987776543
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.43 E-value=4.8 Score=37.23 Aligned_cols=191 Identities=9% Similarity=0.098 Sum_probs=93.6
Q ss_pred eCCcEEEEecCC----CeEEEEEccCceeeeeec--------ccccceeEEEEec-CCCEEEEEeCCC------cEEEEe
Q 047355 69 AREHWIVCGSDD----KFIRVFDYNTMASVKEFE--------AHEDYIRSLAVHP-TFPFVLTASDDK------LIKLWD 129 (312)
Q Consensus 69 ~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~--------~h~~~i~~~~~~~-~~~~l~t~s~d~------~v~iwd 129 (312)
.++..++.|+.+ ..+.+||..+.+- ..+. .....-.+++..+ ++.+++.||.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W-~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKI-DMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCE-EEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeE-EEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 456666677643 4678888776531 1111 0111112344443 667777887543 467788
Q ss_pred CCCCceee-eEecCCccceEEEEeCCCCCCEEEEEeCCC--eEEEEEcCCCcceeee-----cccccceeEEEEEEcCCc
Q 047355 130 WEKNWECT-QTFEGHSHYVMQSAFNPKDLNTFASASLDG--TIQIWNMDSSAAKFTL-----DAHEKGINCIDYFITSDK 201 (312)
Q Consensus 130 ~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg--~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~ 201 (312)
..+..... ......... ....... ++.+++.|+.++ .+.+||..+..-...- ........++.+ ...++
T Consensus 475 ~~t~~W~~~~~~p~~R~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~-~~~~~ 551 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEF-DPVSK 551 (695)
T ss_dssp TTTTEEEECCCCSBCCBS-CEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEE-ETTTT
T ss_pred CCCCcEEECCCCCCCccc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEE-eCCCC
Confidence 76542111 111100011 1112211 446777777654 6899998775422211 111111111221 12225
Q ss_pred eEEEEEeC--C-----CeEEEEeCCCCe------EEEEec---ccccCeEEEEEeCCCcEEEEEeC--------CCcEEE
Q 047355 202 VYLITGSD--D-----FTVKVWDYETKT------CVQILE---GHTNNVTAVCFHPELRIIITASE--------DGTILI 257 (312)
Q Consensus 202 ~~l~sg~~--d-----g~i~vwd~~~~~------~~~~~~---~h~~~i~~l~~~~~~~~l~s~s~--------dg~v~i 257 (312)
.+++.|+. + ..+..||..+.. ....-. .....- +++...++++++.|+. ...+.+
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEE
Confidence 66666665 2 458899987765 222211 111122 2333344677888874 346899
Q ss_pred EeCCCcc
Q 047355 258 WNATTFR 264 (312)
Q Consensus 258 wd~~~~~ 264 (312)
||..+.+
T Consensus 631 yd~~t~~ 637 (695)
T 2zwa_A 631 LDPLSET 637 (695)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 9987643
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.01 E-value=3.2 Score=33.96 Aligned_cols=242 Identities=10% Similarity=0.054 Sum_probs=121.9
Q ss_pred CCCCeEEEEe--cCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCC--------------CeEEEEEccC
Q 047355 27 PTQPWVLASL--YSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDD--------------KFIRVFDYNT 90 (312)
Q Consensus 27 ~~~~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d--------------g~i~iwd~~~ 90 (312)
+++.+|+-.. .++.|...+.+..... .+... .+.-+++++++|+-.... ..|+..+++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~-~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIH-KLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCE-EEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCE-EccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4666666553 3566666666554433 22221 134567888888765432 3577777766
Q ss_pred ceeeeeecccccceeEEEEecCCCEEEEEe--CCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCEEEEEeCCCe
Q 047355 91 MASVKEFEAHEDYIRSLAVHPTFPFVLTAS--DDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNTFASASLDGT 168 (312)
Q Consensus 91 ~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~dg~ 168 (312)
.+..+... . ....++++++.|+... .++.-.||-+.........+..+.. ..++|.+..+..+......
T Consensus 98 ~~~~~l~~---~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 98 HGSTVLDP---D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCCEEEEC---S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred CcceEeec---C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 54322221 1 1235677888888665 3444445443222122223332322 2345544444444433667
Q ss_pred EEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCC--CeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEE
Q 047355 169 IQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDD--FTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRII 246 (312)
Q Consensus 169 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d--g~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l 246 (312)
|...++........+.+ ... ..+ .|++.+|+-.... ..|..-++..... ..+. ...+. .|+|++.+|
T Consensus 169 Iy~~~l~g~~~~~l~~~---~~~-~~~--~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~~~~~--~~~~~g~~I 237 (302)
T 3s25_A 169 LYRYDTASQSEALFYDC---NCY-KPV--VLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT--EANIE--HYNVYGSLI 237 (302)
T ss_dssp EEEEETTTTEEEEEECS---CEE-EEE--EEETTEEEEEEGGGTTEEEEECSSSCCC-EECS--CSCEE--EEEEETTEE
T ss_pred EEEEECCCCCEEEEeCC---Ccc-cee--eecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe--CCCcc--eEEECCCEE
Confidence 88888876654433332 111 122 2445555543322 4677777765543 3332 22333 377888877
Q ss_pred EEEeC--CCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEec-CCeEE
Q 047355 247 ITASE--DGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCD-NGTLI 298 (312)
Q Consensus 247 ~s~s~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~ 298 (312)
.-++. ...|..-++.. .....+... .+. ++.+.++.|..... .+.|.
T Consensus 238 y~~~~~~~~~i~~~~~DG-~~r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~ 287 (302)
T 3s25_A 238 FYQRGGDNPALCVVKNDG-TGFKELAKG--EFC--NINVTSQYVYFTDFVSNKEY 287 (302)
T ss_dssp EEEECSSSCEEEEEETTS-CCCEEEEES--CEE--EEEECSSEEEEEETTTCCEE
T ss_pred EEEECCCCcEEEEEECCC-CccEEeeCC--ccc--eEEEeCCEEEEEECCCCeEE
Confidence 75533 34565556543 222333222 232 45778888887763 34444
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.89 E-value=3.7 Score=34.37 Aligned_cols=65 Identities=14% Similarity=0.251 Sum_probs=43.1
Q ss_pred CeEEEEEeC-------CCcEEEEEeCCCcEEEEeCCCcceeee---cccCccceEEEEEecCCCeEEEEe-cCCeE
Q 047355 233 NVTAVCFHP-------ELRIIITASEDGTILIWNATTFRLQNT---LSSGLERVWSIGYKKGSNQVAFGC-DNGTL 297 (312)
Q Consensus 233 ~i~~l~~~~-------~~~~l~s~s~dg~v~iwd~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i 297 (312)
....++|.. ++.++++.-..+.|...++...+.... +.....++..+++.|||.++++.. .+|.|
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 567788863 467777777778888887765433221 222345899999999999777544 35554
No 343
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.16 E-value=6.3 Score=33.33 Aligned_cols=47 Identities=11% Similarity=0.064 Sum_probs=27.9
Q ss_pred EEEEEeCC-CcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEe
Q 047355 235 TAVCFHPE-LRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYK 282 (312)
Q Consensus 235 ~~l~~~~~-~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 282 (312)
..++++|. ...|+.++.++.|..-+ ..++-...+...+..+.+|+|.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 35788874 34466676666665443 2344444455566677788775
No 344
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.61 E-value=5.8 Score=31.99 Aligned_cols=206 Identities=15% Similarity=0.118 Sum_probs=101.5
Q ss_pred CCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecCCccceEEEEeCCCCCCE
Q 047355 80 DKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEGHSHYVMQSAFNPKDLNT 159 (312)
Q Consensus 80 dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 159 (312)
||.|..|-......+..-......|..++......+++ . ||.+..|-.+...+.-.... -...+..+.... .+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~-~~~~v~~ia~G~---~h 113 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAE-ARSGVDAIAAGA---WA 113 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGG-GSSSEEEEEEET---TE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcc-cCCCeEEEECcC---CE
Confidence 89999997554322211112234677777654433333 4 89999997543222110000 012455555432 34
Q ss_pred EEEEeCCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecccccCeEEEEE
Q 047355 160 FASASLDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEGHTNNVTAVCF 239 (312)
Q Consensus 160 ~~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~ 239 (312)
.+.-. ||.|..|-.......-.-......+..+. .. ....++. . ||.|..|-......+.....-...|..++-
T Consensus 114 s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~--~G-~~~~~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~ 187 (282)
T 3qhy_B 114 SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALD--GG-VYTALAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAG 187 (282)
T ss_dssp EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEE--EC-SSEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEE
T ss_pred EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEE--cc-cCEEEEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEe
Confidence 45556 99999997754322211111123344443 22 2233333 3 799999965321111111112346777776
Q ss_pred eCCCcEEEEEeCCCcEEEEeCCCcceeeecccCccceEEEEEecCCCeEEEEecCCeEEEEeccC
Q 047355 240 HPELRIIITASEDGTILIWNATTFRLQNTLSSGLERVWSIGYKKGSNQVAFGCDNGTLIVKIGNS 304 (312)
Q Consensus 240 ~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~ 304 (312)
-... .++. .||.|+.|-......+..-......+..++-.. ...++-. +|+++.|-.+.
T Consensus 188 G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~--~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 188 GIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGE--WYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp CSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECS--SCEEEEE-TTEEEEESTTC
T ss_pred cCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCC--CEEEEEE-CCEEEEecCCC
Confidence 5543 3444 599999997654322211112234455554332 3333333 88888776553
No 345
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.13 E-value=15 Score=36.15 Aligned_cols=138 Identities=16% Similarity=0.051 Sum_probs=79.6
Q ss_pred eEEEEEccCceeeeeeccc-ccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc-eeeeEecCCccceEEEEeCCCC---
Q 047355 82 FIRVFDYNTMASVKEFEAH-EDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW-ECTQTFEGHSHYVMQSAFNPKD--- 156 (312)
Q Consensus 82 ~i~iwd~~~~~~~~~~~~h-~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~--- 156 (312)
.|++.+.+....+..+... ...|...+.+. .+++.++ ++.+.++++.... ....... -...+.++.+.|..
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~ 568 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSN 568 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSST
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCc
Confidence 4666666554455555533 34577766653 3555554 5778777765321 1111111 23457777776532
Q ss_pred --CCEEEEEeC-CCeEEEEEcCCCcceeeeccc-ccceeEEEEEEcCCceEEEEEeCCCeEEEEe--CCCCeE
Q 047355 157 --LNTFASASL-DGTIQIWNMDSSAAKFTLDAH-EKGINCIDYFITSDKVYLITGSDDFTVKVWD--YETKTC 223 (312)
Q Consensus 157 --~~~~~s~s~-dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd--~~~~~~ 223 (312)
...++.|.. |++++|+++...+......-. .....++.+.......++..|-.||.+.-+. ..++++
T Consensus 569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 569 GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp TCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred ccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 368888886 999999999876554332211 1223334333234457888999999876554 345544
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.63 E-value=9.7 Score=31.79 Aligned_cols=225 Identities=13% Similarity=0.096 Sum_probs=114.2
Q ss_pred ceeEEEEeeCCcEEEEecCCCeEEEEEccCcee--eeee----cccccceeEEEEecC---CCEE-EEE--eCCCcEEEE
Q 047355 61 PVRTAKFVAREHWIVCGSDDKFIRVFDYNTMAS--VKEF----EAHEDYIRSLAVHPT---FPFV-LTA--SDDKLIKLW 128 (312)
Q Consensus 61 ~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~--~~~~----~~h~~~i~~~~~~~~---~~~l-~t~--s~d~~v~iw 128 (312)
.-..++|.+++..+++--..|.|++++.+++.. +..+ .........|+++|+ +..| ++- ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 456889999998766655589999997654432 2111 123456789999995 3333 322 234445555
Q ss_pred eCCCC---------ceee-eEec-CCccceEEEEeCCCCCCEEEEEeC-------------CCeEEEEEcCCC-------
Q 047355 129 DWEKN---------WECT-QTFE-GHSHYVMQSAFNPKDLNTFASASL-------------DGTIQIWNMDSS------- 177 (312)
Q Consensus 129 d~~~~---------~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~s~s~-------------dg~v~iwd~~~~------- 177 (312)
..... .+.+ ..+. ...+....+.|.|. +.+.++.+. .|.|.-.+.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 54331 1111 1121 12233455778874 455555432 345555555432
Q ss_pred -cceeeecccccceeEEEEEEcCCceEEEEEe-CCC--eEEEEeCCCCe------------------EEEEecccccCeE
Q 047355 178 -AAKFTLDAHEKGINCIDYFITSDKVYLITGS-DDF--TVKVWDYETKT------------------CVQILEGHTNNVT 235 (312)
Q Consensus 178 -~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~-~dg--~i~vwd~~~~~------------------~~~~~~~h~~~i~ 235 (312)
.....-.+|..+ .-++ +.+++.+.++-. .|+ .|... +.+. ++..+..+.....
T Consensus 192 ~~~~i~a~G~RNp-~Gla--~dp~G~L~~~d~g~~~~deln~i--~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 192 PGSPVYSYGHRNV-QGLA--WDDKQRLFASEFGQDTWDELNAI--KPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp TTCCEEEBCCSBC-CEEE--ECTTCCEEEEECCSSSCEEEEEE--CTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCeEEeeCCCCc-ceEE--ECCCCCEEEEecCCCCCceeeEE--cCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 111112234332 2233 355565544432 222 23322 1111 1112221212456
Q ss_pred EEEEeCCCcEEEEEeCCCcEEEEeCCCcce----eeecccCccceEEEEEecCCCeEEEEe
Q 047355 236 AVCFHPELRIIITASEDGTILIWNATTFRL----QNTLSSGLERVWSIGYKKGSNQVAFGC 292 (312)
Q Consensus 236 ~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (312)
.++|. ++.++...-..+.|....+...+. ..-+.....++..|+..|||.++++..
T Consensus 267 G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 77776 355555555556666666543321 223344457899999999999888765
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.57 E-value=15 Score=34.04 Aligned_cols=266 Identities=12% Similarity=0.112 Sum_probs=135.4
Q ss_pred cCcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEecCCceeEEEEeeCCcEEEEecCCCeEEEEEccCceeeee
Q 047355 17 SDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKE 96 (312)
Q Consensus 17 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 96 (312)
...|.++.-..++ .|..|..+| +..+|..+.+...........|..+.. .++ .|..|+.+ -+..+|..+.+. ..
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~-~~ 135 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL-TS 135 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE-EE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE-EE
Confidence 3568888877766 566666654 778887654322110111223554432 344 56566665 577888766443 22
Q ss_pred ec-----ccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCceeeeEecC----CccceEEEEeCCCCCCEEEEEeCCC
Q 047355 97 FE-----AHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWECTQTFEG----HSHYVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 97 ~~-----~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~s~dg 167 (312)
+. .....|.++...+++.+.+ |+.+ -+..+|............. ....+..+...+. ...+..++. +
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-~~~lWigt~-~ 211 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTT-RQCVWIGTE-G 211 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETT-TTEEEEEEE-E
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECC-CCEEEEEEC-C
Confidence 21 1134588888777777655 4444 4667776543111111111 1123555555443 344444553 4
Q ss_pred eEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEEEeCCCeEEEEeCCCCeEEEEecc-------cccCeEEEEEe
Q 047355 168 TIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLITGSDDFTVKVWDYETKTCVQILEG-------HTNNVTAVCFH 240 (312)
Q Consensus 168 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-------h~~~i~~l~~~ 240 (312)
-+..+|..+.+...........+.++. ...++.+. .|+.+ -+.+++..+.+....... ....|.++...
T Consensus 212 Gl~~~~~~~~~~~~~~~l~~~~i~~i~--~d~~g~lW-igT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D 287 (758)
T 3ott_A 212 YLFQYFPSTGQIKQTEAFHNNSIKSLA--LDGNGDLL-AGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFAD 287 (758)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEEEEE--ECTTCCEE-EEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEEC
T ss_pred CCeEEcCCCCeEEeccCCCCCeEEEEE--EcCCCCEE-EEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEc
Confidence 588888776543221111122344443 44555533 44544 588888776544332211 12358999888
Q ss_pred CCCcEEEEEeCCCcEEEEeCCC-cceeee--cc--cCccceEEEEEecCCCeEEEEecCCeEEE
Q 047355 241 PELRIIITASEDGTILIWNATT-FRLQNT--LS--SGLERVWSIGYKKGSNQVAFGCDNGTLIV 299 (312)
Q Consensus 241 ~~~~~l~s~s~dg~v~iwd~~~-~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~v 299 (312)
.++.+ -.|+..| +.+..... ++.... .. .....|.++.-..+|+.-+. +.+|..++
T Consensus 288 ~~g~l-WiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~Gl~~~ 348 (758)
T 3ott_A 288 QEHNI-WLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANGLIRF 348 (758)
T ss_dssp TTCCE-EEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTEEEEE
T ss_pred CCCCE-EEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCcceee
Confidence 77764 4455556 54443321 221110 00 11245778777777766554 35554443
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.93 E-value=2.5 Score=37.76 Aligned_cols=107 Identities=9% Similarity=0.043 Sum_probs=67.0
Q ss_pred hhcccCcEEEEEEcCCCCeEEEEe-cCCeEEEEeccCCce-------------eeeEEecCCceeEEEEeeCCcEEEEec
Q 047355 13 FIQKSDRVKSVDFHPTQPWVLASL-YSGTVCIWNYHSQTT-------------EKSVKVTDSPVRTAKFVAREHWIVCGS 78 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~l~~g~ 78 (312)
|+.....-..+.++|||+++++++ -+.++.++++++... ........+| ...+|.++|.-..+--
T Consensus 318 ~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGP-lHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 318 YVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGP-LHTTFDGRGNAYTTLF 396 (638)
T ss_dssp EEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCE-EEEEECSSSEEEEEET
T ss_pred EEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcc-cEEEECCCCceEeeee
Confidence 444456667889999999988655 578999999874211 1122223333 4678999884444555
Q ss_pred CCCeEEEEEccCc----------eeeeeecccccceeEEE-----EecCCCEEEEEe
Q 047355 79 DDKFIRVFDYNTM----------ASVKEFEAHEDYIRSLA-----VHPTFPFVLTAS 120 (312)
Q Consensus 79 ~dg~i~iwd~~~~----------~~~~~~~~h~~~i~~~~-----~~~~~~~l~t~s 120 (312)
-|..|..|+++.. ..+.++..|-.+-.-.+ -.++|++|++..
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 8999999998753 24444544443322221 246778887764
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=85.31 E-value=14 Score=30.11 Aligned_cols=200 Identities=6% Similarity=0.042 Sum_probs=98.1
Q ss_pred EeeCCcEEEEec--CCCeEEEEEccCceeeeeecccccceeEEEEecCCCEEEEEeCC--------------CcEEEEeC
Q 047355 67 FVAREHWIVCGS--DDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDD--------------KLIKLWDW 130 (312)
Q Consensus 67 ~~~~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~t~s~d--------------~~v~iwd~ 130 (312)
|+.++.+|+-.. .++.|...+.+... .+.+... .+--+++++..|...... ..|+..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 445666666543 34666666655433 2333221 123457888888766543 24555555
Q ss_pred CCCceeeeEecCCccceEEEEeCCCCCCEEEEEe----CCCeEEEEEcCCCcceeeecccccceeEEEEEEcCCceEEEE
Q 047355 131 EKNWECTQTFEGHSHYVMQSAFNPKDLNTFASAS----LDGTIQIWNMDSSAAKFTLDAHEKGINCIDYFITSDKVYLIT 206 (312)
Q Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s----~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 206 (312)
..... ..+..... ..+++.+ +.++-.. .+..|...+++.... ..+..+.. . .+.+.. +.+..+
T Consensus 96 dg~~~--~~l~~~~~----~~~s~~g-~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~~--~--~~~~~g-~~iy~t 162 (302)
T 3s25_A 96 NGHGS--TVLDPDPC----IYASLIG-NYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHYL--F--TCNTSD-RYFYYN 162 (302)
T ss_dssp TSCCC--EEEECSCE----EEEEEET-TEEEEEEESSSSCEEEEEEETTSCCC-EEEESSCC--C--CSEEET-TEEEEE
T ss_pred CCCcc--eEeecCCc----cEEEEeC-CEEEEEeecCCCCceEEEEECCCCCe-EEEeCCCc--e--EeeEEC-CEEEEE
Confidence 44321 11211111 1344433 4454443 344566666664333 23333322 1 122222 233334
Q ss_pred EeCCCeEEEEeCCCCeEEEEecccccCeEEEEEeCCCcEEEEEeCCC--cEEEEeCCCcceeeecccCccceEEEEEecC
Q 047355 207 GSDDFTVKVWDYETKTCVQILEGHTNNVTAVCFHPELRIIITASEDG--TILIWNATTFRLQNTLSSGLERVWSIGYKKG 284 (312)
Q Consensus 207 g~~dg~i~vwd~~~~~~~~~~~~h~~~i~~l~~~~~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 284 (312)
......|.+-++..+.....+.+ .. ...++|++++|+-....+ .|..-++.... ...+... .+ ..|+|+
T Consensus 163 ~~g~~~Iy~~~l~g~~~~~l~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~~--~~--~~~~~~ 233 (302)
T 3s25_A 163 NPKNGQLYRYDTASQSEALFYDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTEA--NI--EHYNVY 233 (302)
T ss_dssp CTTTCCEEEEETTTTEEEEEECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSCS--CE--EEEEEE
T ss_pred eCCCceEEEEECCCCCEEEEeCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeCC--Cc--ceEEEC
Confidence 44467898888876655444332 22 234668888887665443 45555554433 2223221 22 236788
Q ss_pred CCeEEEEec
Q 047355 285 SNQVAFGCD 293 (312)
Q Consensus 285 ~~~l~~~~~ 293 (312)
++.|.++.+
T Consensus 234 g~~Iy~~~~ 242 (302)
T 3s25_A 234 GSLIFYQRG 242 (302)
T ss_dssp TTEEEEEEC
T ss_pred CCEEEEEEC
Confidence 888877643
No 350
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=84.97 E-value=19 Score=31.32 Aligned_cols=62 Identities=16% Similarity=0.084 Sum_probs=35.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCcEEEEeCCCCc-eeeeEecC------CccceEEEEeCCC---CCCEEEEEe
Q 047355 103 YIRSLAVHPTFPFVLTASDDKLIKLWDWEKNW-ECTQTFEG------HSHYVMQSAFNPK---DLNTFASAS 164 (312)
Q Consensus 103 ~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~-~~~~~~~~------~~~~v~~~~~~~~---~~~~~~s~s 164 (312)
.-..|++.|+++++++-...+.|++++..... .....+.. ...-...++++|. +..+.++-+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 35689999999877655444468888753221 11222211 2334567899984 444444443
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.66 E-value=35 Score=30.72 Aligned_cols=264 Identities=10% Similarity=0.053 Sum_probs=132.1
Q ss_pred EEEEecCCeEEEEeccCCceeeeEEec---------------------------CCceeEEEEe---eCCcEEEEec-CC
Q 047355 32 VLASLYSGTVCIWNYHSQTTEKSVKVT---------------------------DSPVRTAKFV---AREHWIVCGS-DD 80 (312)
Q Consensus 32 l~~~~~dg~v~iw~~~~~~~~~~~~~~---------------------------~~~v~~~~~~---~~~~~l~~g~-~d 80 (312)
+.+|+..|.|+|+-+.+.+.++.+... +..-..+.+. -||++|+.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 457888999999999888777654211 1111223333 2577887765 46
Q ss_pred CeEEEEEccCceeeeeecc-cccceeEEEEe--cCCCEEEEEeCCCcEEEEe---C--CCCcee--eeEecCCc-cceEE
Q 047355 81 KFIRVFDYNTMASVKEFEA-HEDYIRSLAVH--PTFPFVLTASDDKLIKLWD---W--EKNWEC--TQTFEGHS-HYVMQ 149 (312)
Q Consensus 81 g~i~iwd~~~~~~~~~~~~-h~~~i~~~~~~--~~~~~l~t~s~d~~v~iwd---~--~~~~~~--~~~~~~~~-~~v~~ 149 (312)
..|...+++.+++.+.++- ....+..+++. |.-.+++.++....-.-=| + .....- ...+.+.+ ...++
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 7888889998887766653 34567788876 6677887776542211000 0 000000 00011110 01111
Q ss_pred EEeCCCCCCEEEEEeCCCeEEEEEcCCCcceeeecccc--cceeEEEEEE------cCCceEEEEEeCCC-eEEEEeCCC
Q 047355 150 SAFNPKDLNTFASASLDGTIQIWNMDSSAAKFTLDAHE--KGINCIDYFI------TSDKVYLITGSDDF-TVKVWDYET 220 (312)
Q Consensus 150 ~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~~------~~~~~~l~sg~~dg-~i~vwd~~~ 220 (312)
+.. +.+... +-.+.+|..-++..-+.+.-..+..-. ..-..+.+.. -.+|.+-. -+| .|.|.|.+.
T Consensus 233 v~v-~gnld~-~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~---~~g~gv~ViD~~~ 307 (638)
T 3sbq_A 233 VIV-DGNLDN-TDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFIT---LGDSKTPVLDGRK 307 (638)
T ss_dssp EEE-SSCCCC-EEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBC---CTTCCCCEEECSC
T ss_pred EEc-CCChhh-cCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEE---ECCCCeeEEcccc
Confidence 111 111111 111222222222221111111110000 0001111100 01222111 121 477888765
Q ss_pred ----Ce-EEEEecccccCeEEEEEeCCCcEEEEEeC-CCcEEEEeCCCcce-------------eeecccCccceEEEEE
Q 047355 221 ----KT-CVQILEGHTNNVTAVCFHPELRIIITASE-DGTILIWNATTFRL-------------QNTLSSGLERVWSIGY 281 (312)
Q Consensus 221 ----~~-~~~~~~~h~~~i~~l~~~~~~~~l~s~s~-dg~v~iwd~~~~~~-------------~~~~~~~~~~v~~~~~ 281 (312)
+. ....+. -....+.+.++|||++++.++. +.++.++|+..... ..+.+ ..-..+..+|
T Consensus 308 ~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~F 385 (638)
T 3sbq_A 308 KDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTF 385 (638)
T ss_dssp BTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEE
T ss_pred ccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEE
Confidence 22 223233 3445678999999998776664 77999999875211 11111 2345789999
Q ss_pred ecCCCeEEEEecCCeEEEEec
Q 047355 282 KKGSNQVAFGCDNGTLIVKIG 302 (312)
Q Consensus 282 ~~~~~~l~~~~~~g~i~v~~~ 302 (312)
.++|+...+-.-|..+.-|.-
T Consensus 386 d~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 386 DGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CSSSEEEEEETTTTEEEEEEH
T ss_pred CCCCceEeeeeecceEEEEec
Confidence 999977777778888877753
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.89 E-value=32 Score=28.84 Aligned_cols=141 Identities=9% Similarity=-0.029 Sum_probs=65.9
Q ss_pred CeEEEEecCCeEEEEeccC-CceeeeE--EecCCceeEEEEee-CCcEEEEecCCC----eEEEEEccCceeeeeecc--
Q 047355 30 PWVLASLYSGTVCIWNYHS-QTTEKSV--KVTDSPVRTAKFVA-REHWIVCGSDDK----FIRVFDYNTMASVKEFEA-- 99 (312)
Q Consensus 30 ~~l~~~~~dg~v~iw~~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~g~~dg----~i~iwd~~~~~~~~~~~~-- 99 (312)
..|++|...| +.+.+-+. +..-... ......+.++.+.+ +...|.++...| .|... .+.++..+.+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 4677788777 44444332 2222222 12345688888887 344455555554 34333 222222222211
Q ss_pred ------------cccceeEEEEecC--CCEEEEEeCCCcEEEEeCC-CCceeeeEec----------------CCccceE
Q 047355 100 ------------HEDYIRSLAVHPT--FPFVLTASDDKLIKLWDWE-KNWECTQTFE----------------GHSHYVM 148 (312)
Q Consensus 100 ------------h~~~i~~~~~~~~--~~~l~t~s~d~~v~iwd~~-~~~~~~~~~~----------------~~~~~v~ 148 (312)
+...|.++++.|. ...+..+...+.|...+-. .......... .....+.
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 1124778888862 3445555545554443211 1111111010 0123466
Q ss_pred EEEeCCCCCCEEEEEeCCCeEEEE
Q 047355 149 QSAFNPKDLNTFASASLDGTIQIW 172 (312)
Q Consensus 149 ~~~~~~~~~~~~~s~s~dg~v~iw 172 (312)
.+.++|.+.+.+..+..++.|...
T Consensus 181 ~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEEECCCCCCEEEEEECCCCEEEE
Confidence 777887555555555545544443
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.22 E-value=63 Score=28.08 Aligned_cols=106 Identities=8% Similarity=0.007 Sum_probs=60.0
Q ss_pred cCcEEEEEEcCCCC-eEEEEecCCeEEEEeccCCc---eeee----EEe-----cCCceeEEEEeeC---CcEEEEe-cC
Q 047355 17 SDRVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQT---TEKS----VKV-----TDSPVRTAKFVAR---EHWIVCG-SD 79 (312)
Q Consensus 17 ~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~---~~~~----~~~-----~~~~v~~~~~~~~---~~~l~~g-~~ 79 (312)
-+.-+.|+|.|+++ +|+++...|.|++++.+... .... +.. .+.....++|.|+ ..+|+.. +.
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 35668999999996 67778889999999754321 1111 111 1345677888875 2333332 21
Q ss_pred --C----------CeEEEEEccC----------ceeeeeec--ccccceeEEEEecCCCEEEEEeCC
Q 047355 80 --D----------KFIRVFDYNT----------MASVKEFE--AHEDYIRSLAVHPTFPFVLTASDD 122 (312)
Q Consensus 80 --d----------g~i~iwd~~~----------~~~~~~~~--~h~~~i~~~~~~~~~~~l~t~s~d 122 (312)
+ ..|.-|.+.. .+.+..+. ........|+|.|++.+.++.++.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455431 11222221 112235789999999877766553
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.97 E-value=8.3 Score=37.15 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=31.0
Q ss_pred CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee
Q 047355 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 268 (312)
.+.+++..++..++++-+.|+++|+|++.++++..+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 467788888889999999999999999999876554
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.73 E-value=9.9 Score=36.60 Aligned_cols=39 Identities=8% Similarity=0.099 Sum_probs=33.7
Q ss_pred CcEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEE
Q 047355 18 DRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVK 56 (312)
Q Consensus 18 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~ 56 (312)
..|.+++..++..++++-+.|+++|+|++.++++..+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 367888888899999999999999999999988776654
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=61.70 E-value=1e+02 Score=28.55 Aligned_cols=236 Identities=15% Similarity=0.104 Sum_probs=112.4
Q ss_pred cEEEEE-EcCCCCeEEEEecC-----CeEEEEeccCCceee-eEEecCC--------ceeEEEEeeCCcEEEEe------
Q 047355 19 RVKSVD-FHPTQPWVLASLYS-----GTVCIWNYHSQTTEK-SVKVTDS--------PVRTAKFVAREHWIVCG------ 77 (312)
Q Consensus 19 ~i~~~~-~~~~~~~l~~~~~d-----g~v~iw~~~~~~~~~-~~~~~~~--------~v~~~~~~~~~~~l~~g------ 77 (312)
....+. ++|++++++.+-+. ..++++|+.+++.+. .+. ... ....+.|..++..+++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCC
Confidence 445555 89999988866432 268999998876542 122 111 11233676444444432
Q ss_pred ----cCCCeEEEEEccCce--eeeeecccccce-eEEEEecCCCE-----EEEEeCC---CcEEEEeCCCCceeeeEecC
Q 047355 78 ----SDDKFIRVFDYNTMA--SVKEFEAHEDYI-RSLAVHPTFPF-----VLTASDD---KLIKLWDWEKNWECTQTFEG 142 (312)
Q Consensus 78 ----~~dg~i~iwd~~~~~--~~~~~~~h~~~i-~~~~~~~~~~~-----l~t~s~d---~~v~iwd~~~~~~~~~~~~~ 142 (312)
+....|+.|.+.+.. -...+++....+ .....++++.+ +++.+.+ ..+.+.|..........+..
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM 288 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec
Confidence 123568888776542 222344333332 23444556552 4444322 33444454321111112211
Q ss_pred CccceEEEEeCCCCCCEEEEE----------eCCCeEEEEEcCCCc-------ceeeecccc--cceeEEEEEEcCCceE
Q 047355 143 HSHYVMQSAFNPKDLNTFASA----------SLDGTIQIWNMDSSA-------AKFTLDAHE--KGINCIDYFITSDKVY 203 (312)
Q Consensus 143 ~~~~v~~~~~~~~~~~~~~s~----------s~dg~v~iwd~~~~~-------~~~~~~~~~--~~v~~~~~~~~~~~~~ 203 (312)
..... +..++ +..+++.. ...+.|...|+.+.. ....+-.+. ..+..+. ...+ .+
T Consensus 289 ~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~-~l 362 (711)
T 4hvt_A 289 PSDAT--LQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIS--TTKD-RV 362 (711)
T ss_dssp CTTCE--EEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEE--ECSS-CE
T ss_pred CCcce--EeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEE--EECC-EE
Confidence 11111 11111 22233321 246678888887532 112222222 2333333 3443 56
Q ss_pred EEEEeCCCe--EEEEeCCCCeE-EEE-eccc-ccCeEEEEEeCCCc-EEEEEeCC---CcEEEEeCC
Q 047355 204 LITGSDDFT--VKVWDYETKTC-VQI-LEGH-TNNVTAVCFHPELR-IIITASED---GTILIWNAT 261 (312)
Q Consensus 204 l~sg~~dg~--i~vwd~~~~~~-~~~-~~~h-~~~i~~l~~~~~~~-~l~s~s~d---g~v~iwd~~ 261 (312)
+++...++. |.+++..+++. ... +... .+.+......+++. ++++.++. +.+..+|..
T Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 363 FLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 777777764 66777655541 222 2211 24566666667654 44454443 567777765
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.32 E-value=11 Score=37.14 Aligned_cols=39 Identities=8% Similarity=0.095 Sum_probs=32.5
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV 57 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~ 57 (312)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 556667778889999999999999999999888776543
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.42 E-value=11 Score=37.22 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=29.6
Q ss_pred CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee
Q 047355 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 268 (312)
.+.+++..++..++++-+.|+++|+|++.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345667778889999999999999999999876544
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.42 E-value=76 Score=28.55 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=40.5
Q ss_pred CeEEEEEeCCCcEEEEEeC------------CCcEEEEeCCCcceeeecccC-ccceEEEEEecCCCeEEEE
Q 047355 233 NVTAVCFHPELRIIITASE------------DGTILIWNATTFRLQNTLSSG-LERVWSIGYKKGSNQVAFG 291 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~------------dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 291 (312)
....|.|+++|.+.++... ...|..++..++++..-+... ..++..++|+||++.|.+.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4678999999987774332 125666676667765544432 3578999999999887654
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.72 E-value=74 Score=28.62 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=29.3
Q ss_pred eEEEEeCCCCeEEEEeccc-ccCeEEEEEeCCCcEEEEEe
Q 047355 212 TVKVWDYETKTCVQILEGH-TNNVTAVCFHPELRIIITAS 250 (312)
Q Consensus 212 ~i~vwd~~~~~~~~~~~~h-~~~i~~l~~~~~~~~l~s~s 250 (312)
.|..++..+++....+.+. ..+++.++|+||++.|+.+-
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 6777787778776666543 35799999999998776653
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.71 E-value=34 Score=31.64 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=29.5
Q ss_pred cEEEEEEcCCCCeEEEEecCCeEEEEeccCCceeeeEEe
Q 047355 19 RVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKV 57 (312)
Q Consensus 19 ~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~ 57 (312)
.|.++.+ +..+|++-+.|.++|+|++.++++......
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555555 467999999999999999999887766554
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=48.05 E-value=1.1e+02 Score=24.82 Aligned_cols=231 Identities=12% Similarity=0.066 Sum_probs=123.1
Q ss_pred eeCCcEEEEecCCCeEEEEEccCceeee---------eecccccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCcee--
Q 047355 68 VAREHWIVCGSDDKFIRVFDYNTMASVK---------EFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWEC-- 136 (312)
Q Consensus 68 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~---------~~~~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~~-- 136 (312)
.++...+++.+.+|.|+--.+....... .++. .+.+..+........++..+..|.++-.....-...
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 3466778889999999988765443211 1122 244555555555666777888888777654211000
Q ss_pred ---------eeEecCCccceEEEEeCC--CCCCEEEEEeCCCeEEEEEcCCCcc-------eeeecccccceeEEEEEEc
Q 047355 137 ---------TQTFEGHSHYVMQSAFNP--KDLNTFASASLDGTIQIWNMDSSAA-------KFTLDAHEKGINCIDYFIT 198 (312)
Q Consensus 137 ---------~~~~~~~~~~v~~~~~~~--~~~~~~~s~s~dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~ 198 (312)
...+.. ...+..+...+ .....++..+.+|.++...+..... ...+.. ...+..+.. ..
T Consensus 84 ~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~-~~ 160 (312)
T 1suu_A 84 ASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEI-VF 160 (312)
T ss_dssp ----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEE-EC
T ss_pred cCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEE-eC
Confidence 001111 12333332211 1245688889999999888743211 111222 223333322 23
Q ss_pred CCceEEEEEeCCCeEEEEeCCCC-------eEEEEecc-cccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceee---
Q 047355 199 SDKVYLITGSDDFTVKVWDYETK-------TCVQILEG-HTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN--- 267 (312)
Q Consensus 199 ~~~~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~-h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~--- 267 (312)
+...++..+.+|.+..+....- +-...+.- ..+.|-++..-+++..+++.+..|..+...+..+....
T Consensus 161 -~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~ 239 (312)
T 1suu_A 161 -KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGA 239 (312)
T ss_dssp -TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTC
T ss_pred -CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCC
Confidence 3445777888999888876321 11222221 23456666655556678899999999999886543221
Q ss_pred ------ecc-cCccceEEEEEecCCCeEEEEecCCe-EEEEecc
Q 047355 268 ------TLS-SGLERVWSIGYKKGSNQVAFGCDNGT-LIVKIGN 303 (312)
Q Consensus 268 ------~~~-~~~~~v~~~~~~~~~~~l~~~~~~g~-i~v~~~~ 303 (312)
.+. .....+..+..-.+...|+..+.+|. +++.+.+
T Consensus 240 kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 240 TGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp CCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGG
T ss_pred CCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEccc
Confidence 122 22234433333345566777777774 5555543
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.62 E-value=27 Score=32.26 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=26.3
Q ss_pred CeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceeee
Q 047355 233 NVTAVCFHPELRIIITASEDGTILIWNATTFRLQNT 268 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 268 (312)
.|.++.+ +..++++-+.|.++|+|+++++++..+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 3555544 467999999999999999999875443
No 364
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=44.51 E-value=1.2e+02 Score=26.73 Aligned_cols=67 Identities=10% Similarity=0.113 Sum_probs=43.5
Q ss_pred cEEEEEEcCC----C--CeEEEEecCCeEEEEecc-CCc-------eeeeEEe--cCCceeEEEEeeCCcEEEEecCCCe
Q 047355 19 RVKSVDFHPT----Q--PWVLASLYSGTVCIWNYH-SQT-------TEKSVKV--TDSPVRTAKFVAREHWIVCGSDDKF 82 (312)
Q Consensus 19 ~i~~~~~~~~----~--~~l~~~~~dg~v~iw~~~-~~~-------~~~~~~~--~~~~v~~~~~~~~~~~l~~g~~dg~ 82 (312)
..++|+.+.- + ..++.|..+|.|.-.-.. ... .+..+.. ...+|..+.++++.+.|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 5677777532 4 457789999987644332 211 1122232 2468899999999999999999886
Q ss_pred EEE
Q 047355 83 IRV 85 (312)
Q Consensus 83 i~i 85 (312)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 365
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=43.64 E-value=1.5e+02 Score=25.02 Aligned_cols=135 Identities=7% Similarity=0.032 Sum_probs=71.3
Q ss_pred eEEEEEcCCC--cceeeeccc------ccceeEEEEEEc-C-----CceEEEEEeCCCeEEEEeCCCCeEEEEeccc---
Q 047355 168 TIQIWNMDSS--AAKFTLDAH------EKGINCIDYFIT-S-----DKVYLITGSDDFTVKVWDYETKTCVQILEGH--- 230 (312)
Q Consensus 168 ~v~iwd~~~~--~~~~~~~~~------~~~v~~~~~~~~-~-----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--- 230 (312)
.|.+||+.+. +.+.++.-. ......+.+... + ++...++-+..+-|.|+|+++++.-+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4667777777 655544321 223555554421 1 3444556667788999999988766554210
Q ss_pred ---------------ccCeEEEEEeCC----CcEEEEEeCCCcEEEEeCCCccee-----eecc---cC--ccceEEEEE
Q 047355 231 ---------------TNNVTAVCFHPE----LRIIITASEDGTILIWNATTFRLQ-----NTLS---SG--LERVWSIGY 281 (312)
Q Consensus 231 ---------------~~~i~~l~~~~~----~~~l~s~s~dg~v~iwd~~~~~~~-----~~~~---~~--~~~v~~~~~ 281 (312)
...|..|+++|+ ++.|.-..-.+. ++|.+++.-+. ..++ .- ..+-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 135888999987 566655544332 33444331111 1111 10 122334445
Q ss_pred e-cCCCeEEEEecCCeEEEEecc
Q 047355 282 K-KGSNQVAFGCDNGTLIVKIGN 303 (312)
Q Consensus 282 ~-~~~~~l~~~~~~g~i~v~~~~ 303 (312)
. .+|.++.+--++..|..|-++
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETT
T ss_pred eCCCCeEEEEeccCCeEEEEeCC
Confidence 4 455555555555666666554
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.34 E-value=1.1e+02 Score=27.70 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=28.8
Q ss_pred eEEEEeCCCCeEEEEeccc-ccCeEEEEEeCCCcEEEEE
Q 047355 212 TVKVWDYETKTCVQILEGH-TNNVTAVCFHPELRIIITA 249 (312)
Q Consensus 212 ~i~vwd~~~~~~~~~~~~h-~~~i~~l~~~~~~~~l~s~ 249 (312)
.+.+.+..+++..+.+.++ ..+++.++|+||++.|+..
T Consensus 510 ~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4666677778777766665 4689999999999877665
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=42.05 E-value=98 Score=27.93 Aligned_cols=59 Identities=15% Similarity=0.176 Sum_probs=39.7
Q ss_pred CeEEEEEeCCCcEEEEEeCC------------CcEEEEeCCCcceeeecccC-ccceEEEEEecCCCeEEEE
Q 047355 233 NVTAVCFHPELRIIITASED------------GTILIWNATTFRLQNTLSSG-LERVWSIGYKKGSNQVAFG 291 (312)
Q Consensus 233 ~i~~l~~~~~~~~l~s~s~d------------g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 291 (312)
..-.|+|+|.+.++++-..+ ..+.+.+..++++..-+..+ ..++..+.|+||++.|.+.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35789999999977665543 23444565666655444333 4678999999999887654
No 368
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=41.50 E-value=1.5e+02 Score=24.65 Aligned_cols=226 Identities=16% Similarity=0.191 Sum_probs=112.7
Q ss_pred CcEEEEecCCCeEEEEEccCc-----------eeeeeecc-cccceeEEEEecCCCEEEEEeCCCcEEEEeCCCCce---
Q 047355 71 EHWIVCGSDDKFIRVFDYNTM-----------ASVKEFEA-HEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEKNWE--- 135 (312)
Q Consensus 71 ~~~l~~g~~dg~i~iwd~~~~-----------~~~~~~~~-h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd~~~~~~--- 135 (312)
....+.-..||.|..|-.... .....+.. ....+..+++.....+.+.-..||.|..|-.+...+
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 445555567889999854321 11111221 122455566766677777778899999996432110
Q ss_pred -------eeeEecC-CccceEEEEeCCCCCCEEEEEeCCCeEEEEEcCCCcc-----------eeeeccc-ccceeEEEE
Q 047355 136 -------CTQTFEG-HSHYVMQSAFNPKDLNTFASASLDGTIQIWNMDSSAA-----------KFTLDAH-EKGINCIDY 195 (312)
Q Consensus 136 -------~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~dg~v~iwd~~~~~~-----------~~~~~~~-~~~v~~~~~ 195 (312)
....+.. ....+..++. +..+.+.-..||.|+.|-...... ...+... ...+..++
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia- 217 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAA---GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA- 217 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE-
T ss_pred CCCccCcCCeEecccCCCeEEEEEe---CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEE-
Confidence 1111111 1123445543 235666777899999997543110 0011111 11233322
Q ss_pred EEcCCceEEEEEeCCCeEEEEeCCC----------C-eEEEEeccc-ccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCc
Q 047355 196 FITSDKVYLITGSDDFTVKVWDYET----------K-TCVQILEGH-TNNVTAVCFHPELRIIITASEDGTILIWNATTF 263 (312)
Q Consensus 196 ~~~~~~~~l~sg~~dg~i~vwd~~~----------~-~~~~~~~~h-~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~ 263 (312)
........+.-..||.|..|-... . .....+... ...|..++.-.. ..+.-..||.|+.|-....
T Consensus 218 -~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~--hs~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 218 -CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ--FSVALTKSGAVYTWGKGDY 294 (389)
T ss_dssp -ECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT--EEEEEETTSCEEEEECCGG
T ss_pred -EcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC--EEEEEeCCCeEEEEeCCCC
Confidence 222123344556789999995321 1 111122211 224666665443 3334467899999965432
Q ss_pred -ce----------eeecccC-ccceEEEEEecCCCeEEEEecCCeEEEEeccCC
Q 047355 264 -RL----------QNTLSSG-LERVWSIGYKKGSNQVAFGCDNGTLIVKIGNSS 305 (312)
Q Consensus 264 -~~----------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~g~i~v~~~~~~ 305 (312)
++ ...+... ..+|..+ +....+.++-.++|+++.|-.+..
T Consensus 295 GqLG~g~~~~~~~P~~v~~l~~~~v~~i--a~G~~h~~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 295 HRLGHGSDDHVRRPRQVQGLQGKKVIAI--ATGSLHCVCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTCCEEEE--EECSSEEEEEETTCCEEEEECCTT
T ss_pred CCCCCCCCccccCCeEeccCCCCCEEEE--EeccCeEEEECCCCCEEEeeCCCC
Confidence 11 1111111 1234444 444556666678888888877643
No 369
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=38.60 E-value=2.5e+02 Score=26.14 Aligned_cols=152 Identities=14% Similarity=0.163 Sum_probs=72.2
Q ss_pred hhcccCcEEEEEEcCCCC-eEEEEecCCeEEEEeccCCceeeeEEe------------cCCceeEEEEeeC-CcEEEEec
Q 047355 13 FIQKSDRVKSVDFHPTQP-WVLASLYSGTVCIWNYHSQTTEKSVKV------------TDSPVRTAKFVAR-EHWIVCGS 78 (312)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~~~~~~------------~~~~v~~~~~~~~-~~~l~~g~ 78 (312)
-++...+|.+|+++|.++ .++++...|.|...+ +.++.-..+.. ....+..+++.+. .+.++.+.
T Consensus 16 ~~g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 16 TISGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp SCCBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred EecCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 345667999999999874 566676667665543 22222222111 1234777777763 34444433
Q ss_pred CC-----CeEEEE-EccCceeeeeeccc-------ccc--eeEEEEecCC-CEEEEEeCCCcEEEEeCCCCceeeeEecC
Q 047355 79 DD-----KFIRVF-DYNTMASVKEFEAH-------EDY--IRSLAVHPTF-PFVLTASDDKLIKLWDWEKNWECTQTFEG 142 (312)
Q Consensus 79 ~d-----g~i~iw-d~~~~~~~~~~~~h-------~~~--i~~~~~~~~~-~~l~t~s~d~~v~iwd~~~~~~~~~~~~~ 142 (312)
.. ....+| ..+.++..+.+... ... ...++++|.. ..+..+...+.+ |-.......-.....
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l--~~S~DgG~TW~~~~~ 172 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGL--WRSTDRAQTWSRMNQ 172 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCE--EEESSTTSSCEECTT
T ss_pred cccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcE--EEECCCCcCcccccc
Confidence 21 112333 33333333332210 111 1468888753 344445444332 221111111111111
Q ss_pred ------CccceEEEEeCCCCCCEEEEEeCCC
Q 047355 143 ------HSHYVMQSAFNPKDLNTFASASLDG 167 (312)
Q Consensus 143 ------~~~~v~~~~~~~~~~~~~~s~s~dg 167 (312)
....+..+.++|.+...++.+..++
T Consensus 173 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 173 LPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134667788887666666666554
No 370
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=33.82 E-value=3e+02 Score=25.71 Aligned_cols=147 Identities=11% Similarity=0.115 Sum_probs=73.0
Q ss_pred cCcEEEEEEcCCC-CeEEEEecCCeEEEEeccCCceeeeEEe-------cCCceeEEEEeeC-CcEEEEecCCCe----E
Q 047355 17 SDRVKSVDFHPTQ-PWVLASLYSGTVCIWNYHSQTTEKSVKV-------TDSPVRTAKFVAR-EHWIVCGSDDKF----I 83 (312)
Q Consensus 17 ~~~i~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~-~~~l~~g~~dg~----i 83 (312)
..+|.+|+++|.. ..++++...+.|...+ +.++.-..+.. ....+..+++.+. ...++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 4689999999975 5677777777776654 22332222221 1235888888864 344544432211 2
Q ss_pred EEE-EccCceeeeeeccc---------ccceeEEEEecCCC-EEEEEeCCCcEEEEeCCCCceeeeEec------CCccc
Q 047355 84 RVF-DYNTMASVKEFEAH---------EDYIRSLAVHPTFP-FVLTASDDKLIKLWDWEKNWECTQTFE------GHSHY 146 (312)
Q Consensus 84 ~iw-d~~~~~~~~~~~~h---------~~~i~~~~~~~~~~-~l~t~s~d~~v~iwd~~~~~~~~~~~~------~~~~~ 146 (312)
.+| ..+.++..+..... ...+..++++|... .+..+...+. +|-.....+.-.... .....
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCC
Confidence 333 33334333332210 11356788887543 4444443333 232221111111111 11134
Q ss_pred eEEEEeCCCCCCEEEEEeCC
Q 047355 147 VMQSAFNPKDLNTFASASLD 166 (312)
Q Consensus 147 v~~~~~~~~~~~~~~s~s~d 166 (312)
+..+.++|.+...++.+..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 66778888766666666554
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=32.85 E-value=2e+02 Score=23.47 Aligned_cols=227 Identities=11% Similarity=0.059 Sum_probs=117.0
Q ss_pred CcEEEEecCCCeEEEEEccCcee-------eeeec-ccccceeEEEEecCCCEEEEEeCCCcEEEEe---CCCC-----c
Q 047355 71 EHWIVCGSDDKFIRVFDYNTMAS-------VKEFE-AHEDYIRSLAVHPTFPFVLTASDDKLIKLWD---WEKN-----W 134 (312)
Q Consensus 71 ~~~l~~g~~dg~i~iwd~~~~~~-------~~~~~-~h~~~i~~~~~~~~~~~l~t~s~d~~v~iwd---~~~~-----~ 134 (312)
...+++-+.+|.|+--.+.+... ...+. ...+.+..+........++.-+..|.+.-.. +... .
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 34567778888888766443211 11111 1234555555555555666666667665544 2211 0
Q ss_pred eee---eEecCCccceEEEE-eCC-CCCCEEEEEeCCCeEEEEEcCCCcce-------eeecccccceeEEEEEEcCCce
Q 047355 135 ECT---QTFEGHSHYVMQSA-FNP-KDLNTFASASLDGTIQIWNMDSSAAK-------FTLDAHEKGINCIDYFITSDKV 202 (312)
Q Consensus 135 ~~~---~~~~~~~~~v~~~~-~~~-~~~~~~~s~s~dg~v~iwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~ 202 (312)
.++ ..+. ....+..+. ... .+...++..+.+|.++.-.+...... ..+... ..+..+.. .. ...
T Consensus 83 ~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~-~~-~~d 158 (327)
T 3uc1_A 83 QHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVL-CS-AGD 158 (327)
T ss_dssp EEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEE-EC-TTC
T ss_pred EEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEE-ec-CCC
Confidence 110 0111 223344433 221 13468999999999999887542211 112221 22222222 22 334
Q ss_pred EEEEEeCCCeEEEEeCC--CCe-------EEEEec-ccccCeEEEEEeCCCcEEEEEeCCCcEEEEeCCCcceee-----
Q 047355 203 YLITGSDDFTVKVWDYE--TKT-------CVQILE-GHTNNVTAVCFHPELRIIITASEDGTILIWNATTFRLQN----- 267 (312)
Q Consensus 203 ~l~sg~~dg~i~vwd~~--~~~-------~~~~~~-~h~~~i~~l~~~~~~~~l~s~s~dg~v~iwd~~~~~~~~----- 267 (312)
.++..+..|.+..+... .-. -...+. ...+.|.++...++...++..+..|.++.-.+..+....
T Consensus 159 ~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G 238 (327)
T 3uc1_A 159 DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKG 238 (327)
T ss_dssp EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred EEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCc
Confidence 56777888988877665 211 111111 124557777666666789999999999988876544321
Q ss_pred ----ecccCccceEEEEEecCCCeEEEEecCCe-EEEEe
Q 047355 268 ----TLSSGLERVWSIGYKKGSNQVAFGCDNGT-LIVKI 301 (312)
Q Consensus 268 ----~~~~~~~~v~~~~~~~~~~~l~~~~~~g~-i~v~~ 301 (312)
.+......+..+....+...++..+.+|. +++..
T Consensus 239 ~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 239 VLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEG
T ss_pred EEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEeh
Confidence 12221233444443344456666666665 44443
No 372
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=30.75 E-value=1.1e+02 Score=27.31 Aligned_cols=68 Identities=22% Similarity=0.220 Sum_probs=44.1
Q ss_pred CcEEEEEEcCCC--CeEEEEecCCeEEEEeccCCc----eeeeEEec--CCcee-EEEEeeCCcEEEEecCCCeEEE
Q 047355 18 DRVKSVDFHPTQ--PWVLASLYSGTVCIWNYHSQT----TEKSVKVT--DSPVR-TAKFVAREHWIVCGSDDKFIRV 85 (312)
Q Consensus 18 ~~i~~~~~~~~~--~~l~~~~~dg~v~iw~~~~~~----~~~~~~~~--~~~v~-~~~~~~~~~~l~~g~~dg~i~i 85 (312)
..+++|+....+ ..++.|..+|.|.-..+.... ....+... ..+|. .+.++++...|+.++.++.+++
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 457777776533 567789999988765554321 12223222 35674 8888888899999988765554
No 373
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=29.52 E-value=2.2e+02 Score=25.62 Aligned_cols=68 Identities=12% Similarity=0.063 Sum_probs=42.6
Q ss_pred CcEEEEEEc----CCC---CeEEEEecCCeEEEEeccCCc----ee--eeEE--ecCCceeEEEEeeCCcEEEEecCCCe
Q 047355 18 DRVKSVDFH----PTQ---PWVLASLYSGTVCIWNYHSQT----TE--KSVK--VTDSPVRTAKFVAREHWIVCGSDDKF 82 (312)
Q Consensus 18 ~~i~~~~~~----~~~---~~l~~~~~dg~v~iw~~~~~~----~~--~~~~--~~~~~v~~~~~~~~~~~l~~g~~dg~ 82 (312)
...++|+.+ .++ ..++.|..+|.|.-.-..... .. ..+. ....+|..+.++++...|+.++.++.
T Consensus 362 ~~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V 441 (590)
T 3nvq_A 362 YHYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEV 441 (590)
T ss_dssp SCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEE
T ss_pred CcEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceE
Confidence 455666654 233 467789999988644332211 11 1121 13457889999999899999988876
Q ss_pred EEE
Q 047355 83 IRV 85 (312)
Q Consensus 83 i~i 85 (312)
+++
T Consensus 442 ~qV 444 (590)
T 3nvq_A 442 SQV 444 (590)
T ss_dssp EEE
T ss_pred EEc
Confidence 665
No 374
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.06 E-value=1.9e+02 Score=25.68 Aligned_cols=59 Identities=8% Similarity=0.063 Sum_probs=38.1
Q ss_pred CCceEEEEEeCCCeEEEEeCCCC----eEEEEe--cccccCeE-EEEEeCCCcEEEEEeCCCcEEE
Q 047355 199 SDKVYLITGSDDFTVKVWDYETK----TCVQIL--EGHTNNVT-AVCFHPELRIIITASEDGTILI 257 (312)
Q Consensus 199 ~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~--~~h~~~i~-~l~~~~~~~~l~s~s~dg~v~i 257 (312)
.+-..+..|..+|.|.-..+... ..+..+ .....+|. .+.++++...|..++.++.++|
T Consensus 411 ~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 411 NGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp TTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred CCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 34456778889998764433211 123222 22346785 8999999999999998766665
No 375
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.32 E-value=3.6e+02 Score=23.59 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=36.7
Q ss_pred eEEEEEeCCCeEEEEeC-CCCe-------EEEEec--ccccCeEEEEEeCCCcEEEEEeCCCcEEE
Q 047355 202 VYLITGSDDFTVKVWDY-ETKT-------CVQILE--GHTNNVTAVCFHPELRIIITASEDGTILI 257 (312)
Q Consensus 202 ~~l~sg~~dg~i~vwd~-~~~~-------~~~~~~--~h~~~i~~l~~~~~~~~l~s~s~dg~v~i 257 (312)
..+..|+.+|.|.=.-. .... .+..+. ....+|..+.++++...|..++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 34678899998753322 2211 112222 23578999999999999999998887765
No 376
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=23.80 E-value=3.9e+02 Score=23.87 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=42.7
Q ss_pred cEEEEEEcC----C--CCeEEEEecCCeEE-EEeccCC------c-eeeeEEe-----------cCCceeEEEEeeCCcE
Q 047355 19 RVKSVDFHP----T--QPWVLASLYSGTVC-IWNYHSQ------T-TEKSVKV-----------TDSPVRTAKFVAREHW 73 (312)
Q Consensus 19 ~i~~~~~~~----~--~~~l~~~~~dg~v~-iw~~~~~------~-~~~~~~~-----------~~~~v~~~~~~~~~~~ 73 (312)
..++|+.+. + -..++.|..+|.|. +...... . .+..+.. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 457777764 2 25677899999985 3322211 0 1111211 1357888999999899
Q ss_pred EEEecCCCeEEE
Q 047355 74 IVCGSDDKFIRV 85 (312)
Q Consensus 74 l~~g~~dg~i~i 85 (312)
|+.++..+.+++
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999999887766
No 377
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.40 E-value=3.1e+02 Score=24.71 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=37.3
Q ss_pred cEEEEecCCCeEEEEEccC-c-----eeeeeec--ccccceeEEEEecCCCEEEEEeCCCcEEEE
Q 047355 72 HWIVCGSDDKFIRVFDYNT-M-----ASVKEFE--AHEDYIRSLAVHPTFPFVLTASDDKLIKLW 128 (312)
Q Consensus 72 ~~l~~g~~dg~i~iwd~~~-~-----~~~~~~~--~h~~~i~~~~~~~~~~~l~t~s~d~~v~iw 128 (312)
..++.|+.+|.|.-.-... . ..+.++. ....+|..|.+++....|..++.++.+++-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 3567788888876543322 1 1122232 245689999999998899888888766663
Done!