BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047356
MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPKKSRSCFCKCFCWTV
SILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPN
KKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQE
QQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLK
L

High Scoring Gene Products

Symbol, full name Information P value
AT1G54540 protein from Arabidopsis thaliana 4.6e-50
AT1G65690 protein from Arabidopsis thaliana 4.6e-34
NHL25
AT5G36970
protein from Arabidopsis thaliana 6.7e-33
AT5G21130 protein from Arabidopsis thaliana 1.6e-12
AT2G27080 protein from Arabidopsis thaliana 1.9e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047356
        (241 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2020163 - symbol:AT1G54540 "AT1G54540" species...   521  4.6e-50   1
TAIR|locus:2018531 - symbol:AT1G65690 "AT1G65690" species...   370  4.6e-34   1
TAIR|locus:2167489 - symbol:NHL25 "AT5G36970" species:370...   359  6.7e-33   1
TAIR|locus:2178993 - symbol:AT5G21130 "AT5G21130" species...   146  1.6e-12   2
TAIR|locus:2059274 - symbol:AT2G27080 "AT2G27080" species...   166  1.9e-12   1


>TAIR|locus:2020163 [details] [associations]
            symbol:AT1G54540 "AT1G54540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC005287 Pfam:PF03168
            HOGENOM:HOG000238384 EMBL:AY600530 EMBL:AY649288 IPI:IPI00537856
            PIR:D96587 RefSeq:NP_175856.1 UniGene:At.50731
            ProteinModelPortal:Q9SLI0 PaxDb:Q9SLI0 PRIDE:Q9SLI0
            EnsemblPlants:AT1G54540.1 GeneID:841896 KEGG:ath:AT1G54540
            TAIR:At1g54540 eggNOG:NOG326861 InParanoid:Q9SLI0 OMA:YYEKGGH
            PhylomeDB:Q9SLI0 ProtClustDB:CLSN2914189 ArrayExpress:Q9SLI0
            Genevestigator:Q9SLI0 Uniprot:Q9SLI0
        Length = 239

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 110/241 (45%), Positives = 138/241 (57%)

Query:     1 MADYQKIHPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHPNPPXXXXXXXXXXXXWTV 60
             M D QKIHPV+ +EA  +     +       P QR IP   P  P            W +
Sbjct:     1 MGDQQKIHPVLQMEANKTKTTTPAPGKTVLLPVQRPIPP--PVIPSKNRNMCCKIFCWVL 58

Query:    61 SXXXXXXXXXXXXXXXXXXXFQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKITANNPN 120
             S                   F PKLP Y V                 A+F V+ITA NPN
Sbjct:    59 SLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPN 118

Query:   121 XXXXXXXXXXXXLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQE 180
                         + VW ++ KLCEG +P+FYQGH+NVTKL+VALTG+ QYG+T++ A+Q+
Sbjct:   119 EKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQ 178

Query:   181 QQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLK 240
             QQQTGR+PLDLKV+APVAIKLG LK++K++ILG C LVVDSLS NN I+IKAS+CSF  K
Sbjct:   179 QQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDCSFKAK 238

Query:   241 L 241
             L
Sbjct:   239 L 239


>TAIR|locus:2018531 [details] [associations]
            symbol:AT1G65690 "AT1G65690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006865 "amino acid transport" evidence=RCA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] InterPro:IPR004864 EMBL:CP002684 Pfam:PF03168
            EMBL:AY086125 IPI:IPI00518796 RefSeq:NP_564862.1 UniGene:At.35855
            ProteinModelPortal:Q8LD98 EnsemblPlants:AT1G65690.1 GeneID:842880
            KEGG:ath:AT1G65690 TAIR:At1g65690 eggNOG:NOG301283
            InParanoid:Q8LD98 OMA:SSCKFRL PhylomeDB:Q8LD98
            ProtClustDB:CLSN2686710 Genevestigator:Q8LD98 Uniprot:Q8LD98
        Length = 252

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 93/255 (36%), Positives = 126/255 (49%)

Query:     1 MADYQKIHPVMDVEAA-----ASTKEKGSSSHQQQNP--------PQRSIPVMHPNPPXX 47
             M+ +QKI+PV D EAA     A    +GSS  +  +P        PQR +P+    PP  
Sbjct:     1 MSQHQKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLA---PPKK 57

Query:    48 XXXXXXXXXXWTVSXXXXXXXXXXXXXXXXXXXFQPKLPKYSVXXXXXXXXXXXXXXXXY 107
                       +T                     F+PKLP YS+                 
Sbjct:    58 RRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLT 117

Query:   108 AQFDVKITANNPNXXXXXXXXXXXXLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQ 167
               F+V ITA NPN            ++VW    +L  G LPKFYQGH+N T + V +TGQ
Sbjct:   118 TAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQ 177

Query:   168 TQYGSTLMKAIQEQQQ-TGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANN 226
             TQ  S L   ++EQQQ TG IPL ++V+ PV +K GKLKL +V+ L +C + VDSL+ NN
Sbjct:   178 TQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNN 237

Query:   227 KISIKASNCSFNLKL 241
              I I++S+C F L+L
Sbjct:   238 VIKIQSSSCKFRLRL 252


>TAIR|locus:2167489 [details] [associations]
            symbol:NHL25 "AT5G36970" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0009814 "defense response,
            incompatible interaction" evidence=IEP] [GO:0009863 "salicylic acid
            mediated signaling pathway" evidence=IEP] InterPro:IPR004864
            EMBL:CP002688 GO:GO:0009863 Pfam:PF03168 GO:GO:0009814
            IPI:IPI00543683 RefSeq:NP_198513.1 UniGene:At.55170
            ProteinModelPortal:F4K5V1 EnsemblPlants:AT5G36970.1 GeneID:833667
            KEGG:ath:AT5G36970 OMA:HENTTII Uniprot:F4K5V1
        Length = 248

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 88/248 (35%), Positives = 125/248 (50%)

Query:     1 MADYQKIHPVMDVEA----AASTKEKGSSSHQQQNPP--QRSIPVMHPNPPXXXXXXXXX 54
             M+D+QKIHPV D EA     A    +GSS  +  +P   Q++ P+  P            
Sbjct:     1 MSDHQKIHPVSDPEAPPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPREKKGSRSCWCR 60

Query:    55 XXXWTVSXXXXXXXXXXXXXXXXXXXFQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKI 114
                +T+                    F+PK P Y++                   F+V I
Sbjct:    61 CVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTI 120

Query:   115 TANNPNXXXXXXXXXXXXLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTL 174
             TA NPN            +SV   + ++  G LPKFYQGH+N T + V +TG TQ  ++L
Sbjct:   121 TAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNATSL 180

Query:   175 MKAIQEQQQ-TGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLLVVDSLSANNKISIKAS 233
             M  +QEQQ+ TG IPL ++V  PV IKLGKLKL KV+ L +C + VDSL+AN+ I +++S
Sbjct:   181 MTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIRVRSS 240

Query:   234 NCSFNLKL 241
             NC +  +L
Sbjct:   241 NCKYRFRL 248


>TAIR|locus:2178993 [details] [associations]
            symbol:AT5G21130 "AT5G21130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AC140977 Pfam:PF03168 EMBL:AY735684
            IPI:IPI00530380 RefSeq:NP_197612.1 UniGene:At.51062
            ProteinModelPortal:Q84VP8 PRIDE:Q84VP8 EnsemblPlants:AT5G21130.1
            GeneID:832239 KEGG:ath:AT5G21130 TAIR:At5g21130 eggNOG:NOG243433
            HOGENOM:HOG000238384 InParanoid:Q84VP8 OMA:PENAHRY PhylomeDB:Q84VP8
            ProtClustDB:CLSN2916826 ArrayExpress:Q84VP8 Genevestigator:Q84VP8
            Uniprot:Q84VP8
        Length = 281

 Score = 146 (56.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
 Identities = 41/162 (25%), Positives = 66/162 (40%)

Query:    81 FQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKITANNPNXXXXXXXXXXXXLSVWDERA 140
             +QP  P++SV                     +K+ + N                V+    
Sbjct:   121 YQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGT 180

Query:   141 KLCEGFLPKFYQGHQNVTKLDVALTGQT-QYGSTLMKAIQEQQQTGRIPLDLKVDAPVAI 199
             KL  G    F Q   NVT +   L G + +  S+  K + E Q+ G++P  L++ APV  
Sbjct:   181 KLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKF 240

Query:   200 KLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL 241
             K+G +    + I   C + VD L+A+   ++K  NC   L L
Sbjct:   241 KVGSVTTWTMTITVDCKITVDKLTAS--ATVKTENCETGLSL 280

 Score = 41 (19.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query:     3 DYQKI-HPVMDVEAAASTKEKGSSSHQQQNPPQRSIPVMHP 42
             D  +I HP +D   ++S++    S   +  PP  +  +  P
Sbjct:    23 DVHRIKHPSLDTNDSSSSRYSVDSQKSRIGPPPGTYVIKLP 63


>TAIR|locus:2059274 [details] [associations]
            symbol:AT2G27080 "AT2G27080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR004864 GO:GO:0009506 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC005623 Pfam:PF03168
            HOGENOM:HOG000238384 UniGene:At.68415 EMBL:AF370591 EMBL:AY052291
            EMBL:AY061921 EMBL:AK227800 IPI:IPI00543432 PIR:E84668
            RefSeq:NP_565634.1 RefSeq:NP_973540.1 ProteinModelPortal:Q9ZVD2
            IntAct:Q9ZVD2 EnsemblPlants:AT2G27080.1 EnsemblPlants:AT2G27080.2
            GeneID:817250 KEGG:ath:AT2G27080 TAIR:At2g27080 eggNOG:NOG235771
            InParanoid:Q9ZVD2 OMA:GSVKTWT PhylomeDB:Q9ZVD2
            ProtClustDB:CLSN2688462 ArrayExpress:Q9ZVD2 Genevestigator:Q9ZVD2
            Uniprot:Q9ZVD2
        Length = 260

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 42/162 (25%), Positives = 74/162 (45%)

Query:    81 FQPKLPKYSVXXXXXXXXXXXXXXXXYAQFDVKITANNPNXXXXXXXXXXXXLSVWDERA 140
             ++P+ PKYS+                   F+V + + N N            + V+    
Sbjct:   100 YRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDV 159

Query:   141 KLCEGFLPKFYQGHQNVTKLDVALTG-QTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAI 199
              +  G +P FYQ  +NVT + + L+G + Q  S + K ++ +     +P  LK+ APV I
Sbjct:   160 DISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKI 219

Query:   200 KLGKLKLRKVKILGQCLLVVDSLSANNKISIKASNCSFNLKL 241
             K G +K   + +   C + VD L+A ++I  +   CS ++ L
Sbjct:   220 KFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSR--KCSHDVDL 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       182   0.00098  109 3  11 22  0.46    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.86u 0.10s 14.96t   Elapsed:  00:00:01
  Total cpu time:  14.86u 0.10s 14.96t   Elapsed:  00:00:01
  Start:  Sat May 11 05:18:11 2013   End:  Sat May 11 05:18:12 2013

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