BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047356
         (241 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana
           GN=At1g08160 PE=2 SV=1
          Length = 221

 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 76  ILYLVFQPKLPKYSVDSLRIRDLRL-NLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLS 134
           I YL  +PK   Y+V++  +++  + N D  + A+F   I + NP K + + Y    ++S
Sbjct: 57  ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYH-SMRIS 115

Query: 135 VWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTL-MKAIQEQQQTGRIPLDLKV 193
                  +    +  F Q  +N T+++  L       S    + ++ ++  G I +++ +
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 194 DAPVAIKLGKLKLRKVKILGQCLLVVDSLSANN 226
            A V+ K    + R+  +   C  V+ ++++++
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208


>sp|O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1
          Length = 219

 Score = 37.0 bits (84), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 26/204 (12%)

Query: 49  RSCFCKCFCWTVSILVLLLIILAAIGGI-LYLVFQPKLPKYSVDSLRIRDLRLNLDLTLY 107
           R+C C C         L  I  A +  + L+L  +   PK S+ +  I  L  + +    
Sbjct: 12  RNC-CTC--------CLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDN 62

Query: 108 AQFDVKITANNPNKKIGIYYEKGG------KLSVWDERAKLCEG--FLPKFYQGHQNVTK 159
              +  +  +NPNK  GIYY+           +  +  A +  G   +PKFYQGH+   K
Sbjct: 63  TTLNFMVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAK 122

Query: 160 LDVALTGQTQ--YGSTLMKAIQEQQQTGRIPLDLKVDAPVAIKLGKLKLRKVKILGQCLL 217
                 GQ +     T+++A+     +    LDLK      I   K K   V++     +
Sbjct: 123 ----KWGQVKPLNNQTVLRAVLP-NGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEV 177

Query: 218 VVDSLSANNK-ISIKASNCSFNLK 240
             D + A  K I +K S+ SF L+
Sbjct: 178 NGDGVKAQKKGIKMKKSDSSFPLR 201


>sp|Q8IYM9|TRI22_HUMAN E3 ubiquitin-protein ligase TRIM22 OS=Homo sapiens GN=TRIM22 PE=1
           SV=1
          Length = 498

 Score = 31.6 bits (70), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 121 KKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQE 180
           KK+ I+ ++ GK+  W     +CE  L + +QGHQ     +V    Q +    L + I+E
Sbjct: 102 KKLQIFCKEDGKVICW-----VCE--LSQEHQGHQTFRINEVVKECQEKLQVALQRLIKE 154

Query: 181 QQQTGRIPLDLK 192
            Q+  ++  D++
Sbjct: 155 DQEAEKLEDDIR 166


>sp|Q9C615|SYP24_ARATH Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1
          Length = 416

 Score = 31.2 bits (69), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 13/120 (10%)

Query: 76  ILYLVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSV 135
           + + V+  +L  + ++S       L+L+L++           N    IGI+Y++  + +V
Sbjct: 7   VKFQVYDAELTHFDLESNNNLQYSLSLNLSI----------RNSKSSIGIHYDRF-EATV 55

Query: 136 WDERAKLCEGFLPKFYQGHQNVTKLDVALTGQTQY--GSTLMKAIQEQQQTGRIPLDLKV 193
           +    +L    +P FY G +N   L     GQT         K  ++ Q+TG   +D+K+
Sbjct: 56  YYMNQRLGAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKL 115


>sp|Q39Z75|ARGB_GEOMG Acetylglutamate kinase OS=Geobacter metallireducens (strain GS-15 /
           ATCC 53774 / DSM 7210) GN=argB PE=3 SV=1
          Length = 292

 Score = 30.8 bits (68), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 10/118 (8%)

Query: 85  LPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGK---LSVWDERAK 141
           L +Y + S  +R +R+  D       ++ +T     + +G   + GG+   LS  D    
Sbjct: 72  LKRYGIVSEFVRGMRVT-DAATMQVVEMVLTGQVNKEVVGYLNQHGGRAVGLSGKDGSLL 130

Query: 142 LCEGFLPKFYQGHQNVTKLDVALTGQTQYGSTLMKAIQEQQQTGRIPLDLKVDAPVAI 199
           LC   L +  QG  ++ K+D+   G       ++K  QE  QT      + V APV +
Sbjct: 131 LCRKLLQEVKQGDGSLEKVDIGFVGD------VVKVNQELIQTLEHGKFIPVIAPVGV 182


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.136    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,837,298
Number of Sequences: 539616
Number of extensions: 3359762
Number of successful extensions: 9363
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 9360
Number of HSP's gapped (non-prelim): 7
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)