Query 047356
Match_columns 241
No_of_seqs 167 out of 842
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 18:07:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyc_A LEA protein, putative l 98.2 3.8E-06 1.3E-10 68.3 8.4 102 84-196 43-146 (174)
2 1xo8_A AT1G01470; structural g 98.1 5.3E-06 1.8E-10 66.0 5.9 103 84-197 20-124 (151)
3 3but_A Uncharacterized protein 97.8 0.00029 9.9E-09 54.9 11.6 89 107-203 17-108 (136)
4 3j1r_A Archaeal adhesion filam 59.5 4.1 0.00014 21.9 1.3 8 74-81 18-25 (26)
5 2knc_B Integrin beta-3; transm 42.7 16 0.00054 25.2 2.5 22 58-79 12-33 (79)
6 2lk9_A Bone marrow stromal ant 36.3 37 0.0013 19.4 2.9 19 53-71 3-21 (35)
7 1afo_A Glycophorin A; integral 33.6 17 0.0006 21.5 1.3 21 61-81 12-32 (40)
8 2k9j_B Integrin beta-3; transm 32.7 33 0.0011 20.7 2.5 21 58-78 11-31 (43)
9 3vmt_A Monofunctional glycosyl 31.6 25 0.00086 29.8 2.5 14 54-67 35-48 (263)
10 3ixz_B Potassium-transporting 26.8 39 0.0013 29.0 2.9 21 70-90 55-75 (290)
11 3s8f_C Cytochrome C oxidase po 26.3 27 0.00093 20.1 1.2 13 66-78 11-23 (34)
12 1fjk_A Cardiac phospholamban; 24.7 60 0.002 19.8 2.6 8 68-75 43-50 (52)
13 3hd7_A Vesicle-associated memb 24.1 58 0.002 22.7 3.0 9 50-58 62-70 (91)
14 1zza_A Stannin, AG8_1; helix, 21.3 44 0.0015 22.7 1.7 23 61-83 18-40 (90)
15 1cn3_F Fragment of coat protei 21.2 28 0.00095 18.6 0.6 9 2-10 10-18 (29)
16 3qde_A Cellobiose phosphorylas 20.9 1.4E+02 0.0049 29.1 6.0 60 79-153 742-801 (811)
17 3j00_Z Cell division protein F 20.3 97 0.0033 21.9 3.5 38 56-96 5-42 (98)
18 3p5s_A CD38 molecule; cyclic A 20.3 22 0.00074 30.4 0.0 15 181-195 190-204 (278)
No 1
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=98.23 E-value=3.8e-06 Score=68.32 Aligned_cols=102 Identities=16% Similarity=0.190 Sum_probs=77.1
Q ss_pred CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcc-eeecCCCeEEEEE
Q 047356 84 KLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPK-FYQGHQNVTKLDV 162 (241)
Q Consensus 84 k~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~-f~q~~r~tt~v~~ 162 (241)
+.|++++.++++.+++.. .++|.+.++++|||. ..+.+.++ +..++-+|..+++|..+. +..++.+++.+.+
T Consensus 43 ~~PeV~v~~v~~~~~~l~-----~~~~~l~LrV~NPN~-~pLpi~gi-~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V 115 (174)
T 1yyc_A 43 PTPEATVDDVDFKGVTRD-----GVDYHAKVSVKNPYS-QSIPICQI-SYILKSATRTIASGTIPDPGSLVGSGTTVLDV 115 (174)
T ss_dssp CCCEEEEEEEEEEEECSS-----SEEEEEEEEEEECSS-SCCBCCSE-EEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred CCCEEEEEEeEEeccccc-----eEEEEEEEEEECCCC-CCccccce-EEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence 679999999999988766 388999999999995 99999998 588999999999998865 7788999999888
Q ss_pred EEEEeeccChhHHHHHHHHh-cCCeEEEEEEEEEE
Q 047356 163 ALTGQTQYGSTLMKAIQEQQ-QTGRIPLDLKVDAP 196 (241)
Q Consensus 163 ~l~g~~~~~~~~~~~l~~d~-~~G~V~l~v~v~~~ 196 (241)
.++... .+ ...+..++ ..+.++.++++...
T Consensus 116 pv~v~~---~~-l~~~~~~l~~~~~i~Y~L~g~L~ 146 (174)
T 1yyc_A 116 PVKVAY---SI-AVSLMKDMCTDWDIDYQLDIGLT 146 (174)
T ss_dssp EEEESH---HH-HHHTCCCCCSSEEECEEEEEEEE
T ss_pred EEEEEH---HH-HHHHHHhcCCCCccceEEEEEEE
Confidence 876541 11 11222233 23456666655443
No 2
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=98.06 E-value=5.3e-06 Score=65.96 Aligned_cols=103 Identities=17% Similarity=0.240 Sum_probs=76.1
Q ss_pred CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcc-eeecCCCeEEEEE
Q 047356 84 KLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPK-FYQGHQNVTKLDV 162 (241)
Q Consensus 84 k~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~-f~q~~r~tt~v~~ 162 (241)
+.|++++.++++.+++.. ..+|.+.++++|||. ..+.+.+. +..++-+|..+++|..+. +..++.+++.+.+
T Consensus 20 ~~P~v~v~~v~~~~~~~~-----~~~~~~~l~V~NPN~-~~lpi~gi-~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v 92 (151)
T 1xo8_A 20 PKPEGSVTDVDLKDVNRD-----SVEYLAKVSVTNPYS-HSIPICEI-SFTFHSAGREIGKGKIPDPGSLKAKDMTALDI 92 (151)
T ss_dssp CSCCCBCSEEEECCCTTT-----EECEEEEEEEECSSS-SCCCCEEE-EEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred CCCEEEEEEeEEeccCcc-----eeEEEEEEEEECCCC-CCcccccE-EEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence 579999999998876654 478999999999996 99999988 488888999999998865 7788999998888
Q ss_pred EEEEeeccChhHHHHHHHHh-cCCeEEEEEEEEEEE
Q 047356 163 ALTGQTQYGSTLMKAIQEQQ-QTGRIPLDLKVDAPV 197 (241)
Q Consensus 163 ~l~g~~~~~~~~~~~l~~d~-~~G~V~l~v~v~~~v 197 (241)
.++... ..+ ..+..++ ..+.++.+++++..+
T Consensus 93 pv~v~~---~~l-~~~~~~l~~~~~i~Y~l~g~l~i 124 (151)
T 1xo8_A 93 PVVVPY---SIL-FNLARDVGVDWDIDYELQIGLTI 124 (151)
T ss_dssp CCCEEH---HHH-HHHHHHHHHHSEEEEEEEEEEEE
T ss_pred EEEEEH---HHH-HHHHHhcccCCcccEEEEEEEEE
Confidence 776552 112 2222232 346777766555543
No 3
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=97.81 E-value=0.00029 Score=54.89 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=63.8
Q ss_pred EEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeecc-CcceeecCCCeEEEEEEEEEe-eccChhHHHHHHHHhcC
Q 047356 107 YAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGF-LPKFYQGHQNVTKLDVALTGQ-TQYGSTLMKAIQEQQQT 184 (241)
Q Consensus 107 ~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~-vp~f~q~~r~tt~v~~~l~g~-~~~~~~~~~~l~~d~~~ 184 (241)
.+.|.+.+++.|||. +.+.++.. +..++.+|..+|+|. ...+..++.+++.+.+.+.-+ -.+.+ .+.+.+.+
T Consensus 17 ~t~~~~~l~V~NPN~-~~l~i~gl-~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~----~~~~hi~n 90 (136)
T 3but_A 17 QTEIVALAKVRNEDV-VPIVVSGY-HYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE----WWVTHIAN 90 (136)
T ss_dssp EEEEEEEEEEECCSS-SCEEEEEE-EEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT----HHHHHHHT
T ss_pred EEEEEEEEEEeCCCC-cceeeece-EEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH----HHHHHhhc
Confidence 678999999999995 99999987 589999999999987 577889999988888887766 23333 34444444
Q ss_pred C-eEEEEEEEEEEEEEEEeE
Q 047356 185 G-RIPLDLKVDAPVAIKLGK 203 (241)
Q Consensus 185 G-~V~l~v~v~~~vr~kvg~ 203 (241)
| .-.++++ +++++.+++
T Consensus 91 ge~s~l~i~--~~~~l~v~g 108 (136)
T 3but_A 91 GEKTKIRVA--IKPTIEIGG 108 (136)
T ss_dssp TSEEEEEEE--EEEEEECC-
T ss_pred CCceEEEEE--EEEEEEeCC
Confidence 4 3333333 344445443
No 4
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=59.54 E-value=4.1 Score=21.90 Aligned_cols=8 Identities=25% Similarity=0.335 Sum_probs=3.4
Q ss_pred Hhheeeee
Q 047356 74 GGILYLVF 81 (241)
Q Consensus 74 ~~il~lv~ 81 (241)
+.++|+++
T Consensus 18 aVllylW~ 25 (26)
T 3j1r_A 18 AVLLYTWV 25 (26)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 33345543
No 5
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=42.66 E-value=16 Score=25.15 Aligned_cols=22 Identities=0% Similarity=0.101 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHhheee
Q 047356 58 WTVSILVLLLIILAAIGGILYL 79 (241)
Q Consensus 58 ~~~~~ll~lill~gi~~~il~l 79 (241)
.++..+++.++++|++++++|-
T Consensus 12 ~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 12 VVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566777888777774
No 6
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=36.34 E-value=37 Score=19.42 Aligned_cols=19 Identities=21% Similarity=0.355 Sum_probs=7.8
Q ss_pred ehhhHHHHHHHHHHHHHHH
Q 047356 53 CKCFCWTVSILVLLLIILA 71 (241)
Q Consensus 53 cr~~~~~~~~ll~lill~g 71 (241)
|....|+=.++++.++.+|
T Consensus 3 cKL~lg~Gvl~LLviV~Lg 21 (35)
T 2lk9_A 3 SKLLLGIGILVLLIIVILG 21 (35)
T ss_dssp --CHHHHHHHHHHHHHHHH
T ss_pred ceeeecccHHHHHHHHHhc
Confidence 5666665443333333333
No 7
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=33.65 E-value=17 Score=21.53 Aligned_cols=21 Identities=24% Similarity=0.548 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHhheeeee
Q 047356 61 SILVLLLIILAAIGGILYLVF 81 (241)
Q Consensus 61 ~~ll~lill~gi~~~il~lv~ 81 (241)
.+++++.+.+|+++.|+++.|
T Consensus 12 i~lII~~vmaGiIG~IllI~y 32 (40)
T 1afo_A 12 ITLIIFGVMAGVIGTILLISY 32 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 344556666777766665433
No 8
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=32.71 E-value=33 Score=20.67 Aligned_cols=21 Identities=0% Similarity=0.139 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHhhee
Q 047356 58 WTVSILVLLLIILAAIGGILY 78 (241)
Q Consensus 58 ~~~~~ll~lill~gi~~~il~ 78 (241)
+++..++..++++|++++++|
T Consensus 11 ~Iv~gvi~~ivliGl~lLliw 31 (43)
T 2k9j_B 11 VVLLSVMGAILLIGLAALLIW 31 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHHHH
Confidence 344445555667888877777
No 9
>3vmt_A Monofunctional glycosyltransferase; transmembrane, bacterial cell WALL SYNT membrane; HET: LHI; 2.30A {Staphylococcus aureus} PDB: 3vmr_A* 3vms_A 3vmq_A*
Probab=31.58 E-value=25 Score=29.80 Aligned_cols=14 Identities=0% Similarity=0.242 Sum_probs=8.4
Q ss_pred hhhHHHHHHHHHHH
Q 047356 54 KCFCWTVSILVLLL 67 (241)
Q Consensus 54 r~~~~~~~~ll~li 67 (241)
+.+.|++.++++++
T Consensus 35 ~~~~~~~~~~l~~~ 48 (263)
T 3vmt_A 35 RILLKILLTILIII 48 (263)
T ss_dssp CCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 57777766555543
No 10
>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B
Probab=26.85 E-value=39 Score=28.99 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=13.1
Q ss_pred HHHHHhheeeeeeCCCCEEEE
Q 047356 70 LAAIGGILYLVFQPKLPKYSV 90 (241)
Q Consensus 70 ~gi~~~il~lv~rPk~P~f~V 90 (241)
+++.+.+++..+.|+.|++.-
T Consensus 55 Fa~~m~v~l~Tld~~~Pkyqd 75 (290)
T 3ixz_B 55 FALCIYVLMRTIDPYTPDYQD 75 (290)
T ss_pred HHHHHHHHHHhCCCCCCCccc
Confidence 333344445566899999963
No 11
>3s8f_C Cytochrome C oxidase polypeptide 2A; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 2qpd_C* 2qpe_C* 3bvd_C* 3qjq_C* 3qjr_C* 3qjs_C* 3qjt_C* 3qju_C* 3qjv_C* 1xme_C* 3s8g_C* 4esl_C* 4ev3_C* 4f05_C* 4fa7_C* 4faa_C* 1ehk_C* 3eh3_C* 3eh4_C* 3eh5_C* ...
Probab=26.26 E-value=27 Score=20.10 Aligned_cols=13 Identities=8% Similarity=0.350 Sum_probs=6.8
Q ss_pred HHHHHHHHHhhee
Q 047356 66 LLIILAAIGGILY 78 (241)
Q Consensus 66 lill~gi~~~il~ 78 (241)
.++++|+++.++|
T Consensus 11 ~V~ilg~~I~i~W 23 (34)
T 3s8f_C 11 VILVLTLTILVFW 23 (34)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3445555555555
No 12
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=24.71 E-value=60 Score=19.84 Aligned_cols=8 Identities=13% Similarity=0.223 Sum_probs=3.4
Q ss_pred HHHHHHHh
Q 047356 68 IILAAIGG 75 (241)
Q Consensus 68 ll~gi~~~ 75 (241)
+++.+++.
T Consensus 43 lli~iivm 50 (52)
T 1fjk_A 43 LLICIIVM 50 (52)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 34444443
No 13
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=24.08 E-value=58 Score=22.69 Aligned_cols=9 Identities=11% Similarity=0.069 Sum_probs=4.0
Q ss_pred CceehhhHH
Q 047356 50 SCFCKCFCW 58 (241)
Q Consensus 50 ~~ccr~~~~ 58 (241)
..|++-+-+
T Consensus 62 kmwwkn~K~ 70 (91)
T 3hd7_A 62 KYWWKNLKM 70 (91)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 345554443
No 14
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=21.27 E-value=44 Score=22.67 Aligned_cols=23 Identities=9% Similarity=0.092 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHhheeeeeeC
Q 047356 61 SILVLLLIILAAIGGILYLVFQP 83 (241)
Q Consensus 61 ~~ll~lill~gi~~~il~lv~rP 83 (241)
..+++.+..+|+.+...|..+|=
T Consensus 18 ~viliavaalg~li~gcwcylrl 40 (90)
T 1zza_A 18 IVILIAIAALGALILGCWCYLRL 40 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444666666677876663
No 15
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=21.21 E-value=28 Score=18.62 Aligned_cols=9 Identities=33% Similarity=0.504 Sum_probs=7.1
Q ss_pred CCccccccc
Q 047356 2 ADYQKIHPV 10 (241)
Q Consensus 2 ~~~~~~~~~ 10 (241)
|.|||+-|.
T Consensus 10 ashqrvtpd 18 (29)
T 1cn3_F 10 ASHQRVTPD 18 (29)
T ss_dssp TCCCCCEEG
T ss_pred ccccccCch
Confidence 678998884
No 16
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=20.87 E-value=1.4e+02 Score=29.10 Aligned_cols=60 Identities=27% Similarity=0.435 Sum_probs=38.3
Q ss_pred eeeeCCCCEEEEeeeEEeeeecCCCceeEEEEEEEEEEeCCCceeEEEECCCcEEEEEeCceeeeeccCcceeec
Q 047356 79 LVFQPKLPKYSVDSLRIRDLRLNLDLTLYAQFDVKITANNPNKKIGIYYEKGGKLSVWDERAKLCEGFLPKFYQG 153 (241)
Q Consensus 79 lv~rPk~P~f~V~s~~v~~f~~~~~~~l~~~~~~~l~~~NPN~k~~i~Y~~~~~v~v~Y~g~~Lg~~~vp~f~q~ 153 (241)
|.+.|..|.. .+.++++ +.+.. . .+.|+++||+.. +.+ ..++.-+|+.+....+|-+..+
T Consensus 742 L~i~P~LP~~-w~~~~~~-~~~~g-----~--~~~I~v~~~~~~-----~~~-~~~~~~dg~~~~~~~i~~~~~~ 801 (811)
T 3qde_A 742 LKIDPCIPKA-WDGYKVT-RYFRG-----S--TYEITVKNPNHV-----SKG-VAKITVDGNEISGNILPVFNDG 801 (811)
T ss_dssp EEECCBCCTT-CCEEEEE-EEETT-----E--EEEEEEECTTCC-----SBC-EEEEEETTEECSSSBCCCCCSS
T ss_pred EEEeCcCCcc-cCcEEEE-EEECC-----E--EEEEEEEccCCC-----CCC-cEEEEECCEECcCCeeeecCCC
Confidence 6678888877 6677666 35442 2 356777899852 122 3567789988865567755443
No 17
>3j00_Z Cell division protein FTSQ, ingrowth of WALL at septum; ribonucleoprotein, nucleotide-binding, PR biosynthesis, translation, zinc-finger, 70S ribosome, ribos translocon; HET: PEV PGV; 7.10A {Escherichia coli O157}
Probab=20.33 E-value=97 Score=21.95 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhheeeeeeCCCCEEEEeeeEEe
Q 047356 56 FCWTVSILVLLLIILAAIGGILYLVFQPKLPKYSVDSLRIR 96 (241)
Q Consensus 56 ~~~~~~~ll~lill~gi~~~il~lv~rPk~P~f~V~s~~v~ 96 (241)
+.++|.++++..++.+...+..|+.=.| .+-+..+.|+
T Consensus 5 ~G~~F~l~Vl~~l~~~~~~~~~Wl~~~~---~~PI~~V~V~ 42 (98)
T 3j00_Z 5 AGILFLLTVLTTVLVSGWVVLGWMEDAQ---RLPLSKLVLT 42 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCC---CCCCCSSSCC
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcCC---CCCceEEEEe
Confidence 3343333333333344444455544444 4445555554
No 18
>3p5s_A CD38 molecule; cyclic ADP ribose, ECTO-ADP-ribosyl cyclase, glycosida hydrolase; HET: NAG AVU; 1.95A {Bos taurus}
Probab=20.31 E-value=22 Score=30.45 Aligned_cols=15 Identities=7% Similarity=0.076 Sum_probs=8.8
Q ss_pred HhcCCeEEEEEEEEE
Q 047356 181 QQQTGRIPLDLKVDA 195 (241)
Q Consensus 181 d~~~G~V~l~v~v~~ 195 (241)
+.+.|.|.+-+....
T Consensus 190 ~~A~G~V~VmLNGS~ 204 (278)
T 3p5s_A 190 ESACNTVRVVLNGSL 204 (278)
T ss_dssp HHCCSEEEEEEETTS
T ss_pred HhCCCeEEEEEcCCC
Confidence 346787766554443
Done!