BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047359
(440 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224078699|ref|XP_002305605.1| predicted protein [Populus trichocarpa]
gi|222848569|gb|EEE86116.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/439 (60%), Positives = 336/439 (76%), Gaps = 1/439 (0%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M+ SC G+ +SDA S VL+CYSHKGLFM+ LE++R MR GF+ + +ACN++LD L R+
Sbjct: 125 MVDSCRGKSLKSDAFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDVLQRE 184
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVID 120
NEI+LA C Y AM++DGV P+K TWSL+AQILC+ G FE ++ LD G+Y+SV+YN VID
Sbjct: 185 NEIKLAWCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGVYNSVLYNGVID 244
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
SK+GDF AAF+RLN+MC R L PGFSTYS+ILDGA ++ EV +R++ +M EK LL
Sbjct: 245 CCSKRGDFEAAFERLNQMCE-RKLDPGFSTYSAILDGACKHGNEEVIERVMDIMAEKGLL 303
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
PK LS D VIQK SD+ K A M F+RACDEKI LQD T GCMLKALSKE RVKEAI
Sbjct: 304 PKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDATYGCMLKALSKEARVKEAI 363
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+Y LISE+GI V+DS Y+AF+++L +E Q EE +L D++ RG+ P + LS+F+
Sbjct: 364 GLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEILGDMMRRGFRPGTVGLSKFILLL 423
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
K +W+EVE+LL VL+KGLL DS CC SL+E+YCS RQIDKA+ALH K+EKL+ SLDV
Sbjct: 424 SRKRRWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDKAVALHNKMEKLQASLDV 483
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
ATY++LLDGL K+GR+EE VR+FDYMK LK+V+S SF I + LC KE+RKAMK HDEM
Sbjct: 484 ATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKAMKLHDEM 543
Query: 421 LKMGHKPDEATYKQVISGF 439
L MG KPD+A YK++I F
Sbjct: 544 LDMGLKPDKAAYKRLILEF 562
>gi|225444375|ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/440 (56%), Positives = 340/440 (77%), Gaps = 5/440 (1%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+IQ+C G+DS+S L VL+CYS KGLF++ LEV+R + ++G+VP+V +CNALLD+L R+
Sbjct: 133 VIQACRGKDSESPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALLDSLQRE 192
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-SSVMYNLVI 119
NEI+LA C+ GA++R+GV P+ + +A ILC++GK E V+ LLD I ++++Y LVI
Sbjct: 193 NEIKLAWCVCGALIRNGVLPD---YVRIALILCKNGKLERVVRLLDMSIVCNALIYKLVI 249
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D Y ++G+F AAF LNEMCN R PGF Y+SILDGA +YE EV ++G MVEK L
Sbjct: 250 DCYCERGNFSAAFHYLNEMCN-RKFDPGFCAYNSILDGACKYENDEVIQIVMGSMVEKGL 308
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
LPK LS D +IQK+ ++GKT+AA+M FKRA +EKIEL + T GCML+AL+K+GRVKEA
Sbjct: 309 LPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYGCMLRALAKDGRVKEA 368
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I +Y +I E G+TV+D Y+AFVNVLC+E +EV L+ +++ +G+ PC +LS+F+ S
Sbjct: 369 IGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIGKGFSPCGSKLSKFITS 428
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+W E ++LL+ ++KGLL DSFCCS+L+E+YC +RQID +IALH KI+K+KGSLD
Sbjct: 429 LCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIKKVKGSLD 488
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
VATY+VLL+GLF + R+E+AV +FD M+ ++SS+SF I+VS LC +ELRKAMK HDE
Sbjct: 489 VATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDE 548
Query: 420 MLKMGHKPDEATYKQVISGF 439
MLKMG KPD ATYK++ISGF
Sbjct: 549 MLKMGLKPDRATYKRLISGF 568
>gi|255554979|ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542372|gb|EEF43914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 599
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/439 (55%), Positives = 324/439 (73%), Gaps = 1/439 (0%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M+Q+C G+ S L+ VL+ YSHKG F++GLEVY+ MRV G P+V ACN LLDAL R+
Sbjct: 154 MVQACRGKSSLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACNVLLDALQRE 213
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVID 120
+EIRLA C Y AM+R GV P+KFTWSLVA ILC+ G FE ++ LLD GI +SVMYN V+D
Sbjct: 214 SEIRLAWCFYCAMIRVGVLPDKFTWSLVAHILCKDGNFERIVKLLDMGICNSVMYNAVVD 273
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+YSK GDF AAF RLNEM + R + PGFSTYSSILDGA + +V +R+V +MV K+LL
Sbjct: 274 YYSKNGDFKAAFCRLNEMYD-RKVEPGFSTYSSILDGACKCRNLQVIERVVAIMVGKQLL 332
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
K S D +IQKL D+GK AA + FKRACDE+I LQD T G ML+A S EG ++EAI
Sbjct: 333 SKCPSSDYDSIIQKLCDLGKVSAATLFFKRACDERIGLQDATYGRMLRAFSIEGILEEAI 392
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+Y +I ERG+T++D+ AFV++L ++ Q E ++RD++ RG+ PC LS+++
Sbjct: 393 GLYQVILERGLTIKDNASDAFVDLLSEKDQYAEGYEIVRDIMRRGFSPCTSSLSKYITLL 452
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C K +WKE EELL VL+KGLL D+ SL+++YCS++Q DKA+ALH +EKL+ SLD+
Sbjct: 453 CKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSSKQTDKALALHNTLEKLQASLDI 512
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y++LL GL K+GR+EE++++FDYMK LK+ +S+SF +++ LC KELRKAMK HDEM
Sbjct: 513 TAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMKLHDEM 572
Query: 421 LKMGHKPDEATYKQVISGF 439
L MG KPD+ TYK++I F
Sbjct: 573 LNMGLKPDKPTYKRLILEF 591
>gi|223635631|sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 284/423 (67%), Gaps = 6/423 (1%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ KG +GLEV+ MR P+ SA N+LL +L ++N+ R+A CLY AMVR+G+ +
Sbjct: 163 YALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSD 222
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ TW L+AQILC G+ + V L+++G+ S +Y +++ YS+ G+F A F ++EM +
Sbjct: 223 ELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFDAVFSLIHEM-DD 281
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ L F +Y +LD A R E D+++ LMVEKK + + ND +I++L DMGKT
Sbjct: 282 KKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKT 341
Query: 202 YAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYY 259
+A+EM+F++AC+ E + L D T GCMLKALS++ R KEA+ +Y +I +GITV D S Y
Sbjct: 342 FASEMLFRKACNGETVRLWDSTYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYI 401
Query: 260 AFVNVLCKEHQPEEVCGLLR-DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
F N LC++ E L DV++RG++PC +LS +AS C K +WK E+LL +V++
Sbjct: 402 EFANALCRDDNSSEEEEELLVDVIKRGFVPCTHKLSEVLASMCRKRRWKSAEKLLDSVME 461
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR--M 376
+ DSF C LME YC + +++KA+ LH KI+K+KGSLDV Y+ +LD L + +
Sbjct: 462 MEVYFDSFACGLLMERYCRSGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMV 521
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EEAV +F+YMKE+ V+S SF I++ LC +KE++KAM++HDEML++G KPD TYK++I
Sbjct: 522 EEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLI 581
Query: 437 SGF 439
GF
Sbjct: 582 LGF 584
>gi|334186766|ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 257/423 (60%), Gaps = 40/423 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ KG +GLEV+ MR P+ SA N+LL +L ++N+ R+A CLY AMVR+G+ +
Sbjct: 163 YALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSD 222
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ TW L+AQILC G+ + V L+++G+ S +Y +++ YS+ G+F A F ++EM +
Sbjct: 223 ELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFDAVFSLIHEM-DD 281
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ L F +Y +LD A R E D+++ LMVEKK + + ND +I++L DMGKT
Sbjct: 282 KKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKT 341
Query: 202 YAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYY 259
+A+EM+F++AC+ E + L D T GCMLKALS++ R KEA+ +Y +I +GITV D S Y
Sbjct: 342 FASEMLFRKACNGETVRLWDSTYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYI 401
Query: 260 AFVNVLCKEHQPEEVCGLLR-DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
F N LC++ E L DV++RG + S + KW+
Sbjct: 402 EFANALCRDDNSSEEEEELLVDVIKRGKEDGNPQRSFLIRL----WKWR----------- 446
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR--M 376
+ +++KA+ LH KI+K+KGSLDV Y+ +LD L + +
Sbjct: 447 -------------------SGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMV 487
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EEAV +F+YMKE+ V+S SF I++ LC +KE++KAM++HDEML++G KPD TYK++I
Sbjct: 488 EEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLI 547
Query: 437 SGF 439
GF
Sbjct: 548 LGF 550
>gi|297799954|ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313697|gb|EFH44120.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 264/439 (60%), Gaps = 57/439 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S S +LSLV++CY+ KG + +GLEV+ MR P+ SA N+LL +L ++N+ R+
Sbjct: 147 EGDVSLSISLSLVIECYALKGCYQNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRV 206
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A CLY AM ILC G+ + V+ L+++G+ S +Y +++ YS+
Sbjct: 207 ALCLYSAM-----------------ILCEHGRSKSVVKLMETGVESCKIYTNLVECYSRN 249
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G+F A F ++EM +G+ L FS+Y +LD A R E+ D+++G MVEKK L
Sbjct: 250 GEFDATFSLIHEM-DGKKLELSFSSYGCVLDNACRLGDAELIDKVLGSMVEKKFLTLGDS 308
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ ND +I++L DMGKT+A+EM+F++AC+ E + L++ T GCMLKALS++ R KEA+ +Y
Sbjct: 309 ALNDQMIERLCDMGKTFASEMLFRKACNGETVRLRESTYGCMLKALSRKERTKEAVDVYR 368
Query: 245 LISERGITVRD-SDYYAFVNVLCKE-HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+I +GI V D S Y F N LC++ + EE LL DV++RG + S +
Sbjct: 369 MICRKGINVLDESCYNEFANALCRDDNSSEEGEELLVDVIKRGKEDGNPQRSFLIRLW-- 426
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
KW+ + +++KA+ LH KI+K+KGSLDV
Sbjct: 427 --KWR------------------------------SGKLEKALELHEKIKKMKGSLDVNA 454
Query: 363 YDVLLDGLFKDGR--MEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ +LD L + +EEAV +F+YMKE+K V+S SF I++ LC +KE++KAM++HDEM
Sbjct: 455 YNAVLDRLMMRQKEMVEEAVGVFEYMKEMKSVNSKSFTIMIQGLCRVKEMKKAMRSHDEM 514
Query: 421 LKMGHKPDEATYKQVISGF 439
L++ KPD +YK++I GF
Sbjct: 515 LRLDMKPDLVSYKRLILGF 533
>gi|2911074|emb|CAA17536.1| putative protein [Arabidopsis thaliana]
gi|7268914|emb|CAB79117.1| putative protein [Arabidopsis thaliana]
Length = 534
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 244/423 (57%), Gaps = 57/423 (13%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ KG +GLEV+ MR P+ SA N+LL +L ++N+ R+A CLY AM
Sbjct: 163 YALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAM-------- 214
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
ILC G+ + V L+++G+ S +Y +++ YS+ G+F A F ++EM +
Sbjct: 215 ---------ILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFDAVFSLIHEM-DD 264
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ L F +Y +LD A R E D+++ LMVEKK + + ND +I++L DMGKT
Sbjct: 265 KKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKT 324
Query: 202 YAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYY 259
+A+EM+F++AC+ E + L D T GCMLKALS++ R KEA+ +Y +I +GITV D S Y
Sbjct: 325 FASEMLFRKACNGETVRLWDSTYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYI 384
Query: 260 AFVNVLCKEHQPEEVCGLLR-DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
F N LC++ E L DV++RG + S + KW+
Sbjct: 385 EFANALCRDDNSSEEEEELLVDVIKRGKEDGNPQRSFLIRL----WKWR----------- 429
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR--M 376
+ +++KA+ LH KI+K+KGSLDV Y+ +LD L + +
Sbjct: 430 -------------------SGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMV 470
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EEAV +F+YMKE+ V+S SF I++ LC +KE++KAM++HDEML++G KPD TYK++I
Sbjct: 471 EEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLI 530
Query: 437 SGF 439
GF
Sbjct: 531 LGF 533
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 216/437 (49%), Gaps = 10/437 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE-IRLASC 68
S S LV+ + L L + + + YGF+P V + NA+LDA+ R + +++A
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYS 123
++ MV GVSPN +T++++ + C +G E+ L + + + V YN +ID Y
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K G AF L M + L P +Y+ +++G R + + + I+ M +++ +P
Sbjct: 250 KLRKIGEAFKLLRLMA-LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I ++G + A ++ + T ++ ++ K G + A++
Sbjct: 309 VTF--NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ +RG+ Y ++ ++ ++ +++++VE G+ P + + + C
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ ++ LL ++++G + D S+++ +C N++++KA L +++ S DVATY
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ GL K R+ E +F M L + ++ +++ C +L KA++ HDEM++
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY +I+GF
Sbjct: 547 KGFSPDIVTYNVLINGF 563
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 190/460 (41%), Gaps = 98/460 (21%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ + +G + + ++V++ +G + E+ M +VP N L++
Sbjct: 263 LMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVG 322
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYN 116
A L+ MV++G+SPN T++ + +C++G + LD G++ + Y
Sbjct: 323 NFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYT 382
Query: 117 LVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
+ID +S++G A+ + EM NG TP TY+++++G + E + ++ M+
Sbjct: 383 TLIDGFSQQGFLKQAYQIMKEMVENG--FTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E+ +P D V +Y+ ++ +
Sbjct: 441 ERGFIP-------DVV---------SYST---------------------IISGFCRNQE 463
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+++A Q+ + +GI+ + Y + + LCK+ + EVC L ++++ G P + +
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C +G +DKA+ LH ++ +
Sbjct: 524 LINAYCIEG-----------------------------------DLDKALRLHDEMIQKG 548
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
S D+ TY+VL++G K R +EA R + + E V + ++ ++ C+ E + A+
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSAL 607
Query: 415 ----------------KNHDEMLKMGHKPDEATYKQVISG 438
+ + ML+ G+K +E Y +I G
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 217/439 (49%), Gaps = 14/439 (3%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE-IRLASC 68
S S LV+ + L L + + + YGF+P V + NA+LDA+ R + +++A
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-------IYSSVMYNLVIDF 121
++ MV GVSPN +T++++ + C +G E +GL G + + V YN +ID
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLE--MGLFFFGEMERNGCLPNVVTYNTIIDA 247
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y K G AF L M + L P +Y+ +++G R + + + I+ M +++ +P
Sbjct: 248 YCKLRKIGEAFKLLRLMA-LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I ++G + A ++ + T ++ ++ K G + A++
Sbjct: 307 DRVTF--NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ +RG+ Y ++ ++ ++ +++++VE G+ P + + + C
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHC 424
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ ++ LL ++++G + D S+++ +C N++++KA L +++ S DVA
Sbjct: 425 ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY L+ GL K R+ E +F M L + ++ +++ C +L KA++ HDEM
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544
Query: 421 LKMGHKPDEATYKQVISGF 439
++ G PD TY +I+GF
Sbjct: 545 IQKGFSPDIVTYNVLINGF 563
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 190/460 (41%), Gaps = 98/460 (21%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ + +G + + ++V++ +G + E+ M +VP N L++
Sbjct: 263 LMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVG 322
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYN 116
A L+ MV++G+SPN T++ + +C++G + LD G++ + Y
Sbjct: 323 NFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYT 382
Query: 117 LVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
+ID +S++G A+ + EM NG TP TY+++++G + E + ++ M+
Sbjct: 383 TLIDGFSQQGFLKQAYQIMKEMVENG--FTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E+ +P D V +Y+ ++ +
Sbjct: 441 ERGFIP-------DVV---------SYST---------------------IISGFCRNQE 463
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+++A Q+ + +GI+ + Y + + LCK+ + EVC L ++++ G P + +
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C +G +DKA+ LH ++ +
Sbjct: 524 LINAYCIEG-----------------------------------DLDKALRLHDEMIQKG 548
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
S D+ TY+VL++G K R +EA R + + E V + ++ ++ C+ E + A+
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSAL 607
Query: 415 ----------------KNHDEMLKMGHKPDEATYKQVISG 438
+ + ML+ G+K +E Y +I G
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 213/446 (47%), Gaps = 20/446 (4%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+C DS D L++ Y + E + ++R GF ++ ACNAL+ +L R +
Sbjct: 160 NCGSNDSVFD---LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLV 118
LA +Y + R GV N +T +++ LC+ GK E V L + G+Y V YN +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I YS KG AF+ +N M G+ +PG TY+++++G ++ K E + + M+
Sbjct: 277 ISAYSSKGLMEEAFELMNAM-PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVK 237
L P + ++ + G E +F + + D C M+ ++ G +
Sbjct: 336 LSPDS--TTYRSLLMEACKKGDVVETEKVFSDMRSRDV-VPDLVCFSSMMSLFTRSGNLD 392
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF- 296
+A+ ++ + E G+ + Y + C++ L +++++G CAM++ +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG---CAMDVVTYN 449
Query: 297 --VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C + E ++L + + ++ L DS+ + L++ +C + A+ L K+++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA 413
+ LDV TY+ LLDG K G ++ A I+ M +++ + S+ I+V+ LC L +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ DEM+ KP +I G+
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGY 595
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 194/459 (42%), Gaps = 54/459 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ YS KGL + E+ M GF P V N +++ L + + A ++ M+R G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 78 VSPNKFTW--------------------------SLVAQILC---------RSGKFEVVL 102
+SP+ T+ +V ++C RSG + L
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 103 GLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+S I +V+Y ++I Y +KG A + NEM + TY++IL G
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ-QGCAMDVVTYNTILHG 454
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACD 213
+ + +D++ M E+ L P + Y + L D +G A +F++ +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFP------DSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
++I L T +L K G + A +I+ + + I Y VN LC + E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ +++ + P M + + C G + E L ++ +G + D ++L+
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ + KA L K+E+ +G L DV TY+ +L G + +M+EA + M E V
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 392 -VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
S++ +++ L +A + HDEML+ G PD+
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 215/446 (48%), Gaps = 20/446 (4%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+C DS D L++ + + E + ++R G+ ++ ACNAL+ +L R +
Sbjct: 150 NCGSNDSVFD---LLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWV 206
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLV 118
LA +Y + R GV N +T +++ LC+ GK E V L + G+Y V YN +
Sbjct: 207 ELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTL 266
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I YS +G AF+ ++ M + + +PG TY+++++G ++ K E + + M+
Sbjct: 267 ISAYSSQGLMEEAFELMHAMPS-KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVK 237
L P + ++ + G E IF + + D C M+ ++ G +
Sbjct: 326 LSPDS--TTYRSLLMEACKKGDAVETENIFSDMRSRDV-VPDLVCFSSMMSLFTRSGNLD 382
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF- 296
+A+ ++ + E G+ + Y + C++ E L +++++G CAM++ +
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG---CAMDVVTYN 439
Query: 297 --VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C + E ++L + + ++GL DS+ + L++ +C + A+ L K+++
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA 413
+ LDV TY+ LLDG K G ++ A I+ M +++ + SF I+V+ LC L +A
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ DEM+ KP +I G+
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGY 585
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 196/459 (42%), Gaps = 54/459 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ YS +GL + E+ M GF P V N +++ L + + A ++ M+R G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 78 VSPNKFTW--------------------------SLVAQILC---------RSGKFEVVL 102
+SP+ T+ +V ++C RSG + L
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385
Query: 103 GLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+S I +V+Y ++I Y +KG A + NEM + TY++IL G
Sbjct: 386 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ-QGCAMDVVTYNTILHG 444
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACD 213
+ + +D++ M E+ L P + Y + L D +G A +FK+ +
Sbjct: 445 LCKRKMLGEADKLFNEMTERGLFP------DSYTLTILIDGHCKLGNLQNAMELFKKMKE 498
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
++I+L T +L K G + A +I+ + + I + VN LC + E
Sbjct: 499 KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSE 558
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ +++ + P M + + C G + E L ++ +G + D ++L+
Sbjct: 559 AFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIY 618
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ + KA L K+E+ +G L DV TY+ +L G ++ +M+EA + M E V
Sbjct: 619 GFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678
Query: 392 -VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
S++ +++ L +A + HDEML+ G PD+
Sbjct: 679 NPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 186/452 (41%), Gaps = 70/452 (15%)
Query: 52 ALLDALYR-QNEIRLASCLYGAMVRDGVSPNKFTWSLVA--QILCRSGKFE-----VVLG 103
A+++ LYR +N++ L + + + + SL A IL RSG+ V+
Sbjct: 70 AVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRM 129
Query: 104 LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL-NEMCNGRNLTPGFSTYSSILDGARRYE 162
+ SG+ + N ++ YS G + FD L R L + ++ +L
Sbjct: 130 IRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFT-LLRSKGYTV 188
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG---KTYAAEMIFKRACD----EK 215
+ + ++G +V + + + Q++S G Y ++ C EK
Sbjct: 189 SIDACNALIGSLVRIGWVELAW-----RIYQEISRSGVGVNVYTLNIMVNALCKDGKMEK 243
Query: 216 I-----ELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+ E+Q+ T ++ A S +G ++EA ++ H + +G + Y +N
Sbjct: 244 VGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK + E + +++ G P + + C KG E E + S + + ++
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363
Query: 324 DSFCCSSLMEYYCSNRQIDKAI---------------------------------ALHIK 350
D C SS+M + + +DKA+ A++++
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 351 IEKLKG--SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL 407
E L+ ++DV TY+ +L GL K + EA ++F+ M E + S + I++ C L
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L+ AM+ +M + K D TY ++ GF
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 211/445 (47%), Gaps = 9/445 (2%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I +C S L++ Y +G E ++++R G +++ACN LL L R
Sbjct: 176 LISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRT 235
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMY 115
+ LA +YG +VR G+ N +T +++ LC+ KFE V+ L G+++ V Y
Sbjct: 236 GWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY 295
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N +I+ Y ++G AF LN + R + PG TY++IL G + K + + ++ M+
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSF-SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ L P + + ++ ++ A+ IF + + ++ L++ G
Sbjct: 355 QLGLTPNA--ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ +A+ + + GI + Y ++ C+ + + +++ RG + +
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
F+ C K + + + L + ++++G++ D + ++L+ YC + +DKA+ L + +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
D TY+ L+DG K G M A ++D M ++ S+ V++ C L +A+
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
D+ML+ G +P+ T +I G+
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGY 617
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 184/394 (46%), Gaps = 9/394 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK-FEV 100
G P + N LL + R++ I A ++ M R GV P+ ++S + +L R+G ++
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416
Query: 101 VLGLLD---SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
++ + SGI +V+Y ++ID + + G A +EM R TY++ L+
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-ARGCFMDVVTYNTFLN 475
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + +D + MVE+ ++P + +I+ G A +F+ +
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTT--LIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T ++ K G + A +++ + + I Y +N C E
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++E+G P + + + C G + E LS ++ G++ DSF ++L++ Y
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSS 395
++KA L ++EK ++ TY+++L+G +G+M+EA ++ M E+ + +
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
++ +++ +++A + HDEML+ G PD+
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 211/445 (47%), Gaps = 9/445 (2%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I +C S L++ Y +G E ++++R G +++ACN LL L R
Sbjct: 176 LISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRT 235
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMY 115
+ LA +YG +VR G+ N +T +++ LC+ KFE V+ L G+++ V Y
Sbjct: 236 GWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY 295
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N +I+ Y ++G AF LN + R + PG TY++IL G + K + + ++ M+
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSF-SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ L P + + ++ ++ A+ IF + + ++ L++ G
Sbjct: 355 QLGLTPNA--ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ +A+ + + GI + Y ++ C+ + + +++ RG + +
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
F+ C K + + + L + ++++G++ D + ++L+ YC + +DKA+ L + +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
D TY+ L+DG K G M A ++D M ++ S+ V++ C L +A+
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
D+ML+ G +P+ T +I G+
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGY 617
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 184/394 (46%), Gaps = 9/394 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK-FEV 100
G P + N LL + R++ I A ++ M R GV P+ ++S + +L R+G ++
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416
Query: 101 VLGLLD---SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
++ + SGI +V+Y ++ID + + G A +EM R TY++ L+
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-ARGCFMDVVTYNTFLN 475
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + +D + MVE+ ++P + +I+ G A +F+ +
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTT--LIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T ++ K G + A +++ + + I Y +N C E
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++E+G P + + + C G + E LS ++ G++ DSF ++L++ Y
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSS 395
++KA L ++EK ++ TY+++L+G +G+M+EA ++ M E+ + +
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
++ +++ +++A + HDEML+ G PD+
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 199/419 (47%), Gaps = 15/419 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ LE + +++ GFVP + CN +L + N ++A LY M R + + +T++++
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223
Query: 90 QILCRSGKFEVV---LGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + +G +++ G+ +V+ YN +I + +G F A M + L
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM-KDKGL 282
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKT 201
P TY+S + G + + E + ++ M+E L+P + Y + D
Sbjct: 283 EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA 342
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y EMI K + T + AL EGR+ +A + + E+G+ +
Sbjct: 343 YRDEMISKGIMASLV-----TYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N C+ + GLL ++V +G P + + + + + KE + L S + +GL
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L D ++L++ +C+N ID+A L +++ +K D TY+ L+ G ++G++EEA +
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ D MK + S+ ++S +++ A + DEM+ G P TY +I G
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGL 576
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 178/431 (41%), Gaps = 44/431 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ +G E M G P V N ++ + + + A ++ M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDF 128
G+ P+ +T++ LC+ G+ E GL L+ G + ++V YN +ID Y KGD
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM + + + TY+ + + +D ++ M EK ++P
Sbjct: 338 DKAYAYRDEMIS-KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP------- 389
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D V + L + C C G K A + +
Sbjct: 390 DAVTHNI----------------------LINGYCRC--------GDAKRAFGLLDEMVG 419
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI Y + + VL K ++ +E L + + G +P + + + C G
Sbjct: 420 KGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDR 479
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+LL + + +L D ++LM+ YC ++++A L ++++ D +Y+ L+
Sbjct: 480 AFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLIS 539
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K G M++A R+ D M + ++ ++ LC +E A + EM+ G P
Sbjct: 540 GYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITP 599
Query: 428 DEATYKQVISG 438
D++TY +I
Sbjct: 600 DDSTYLSIIEA 610
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 118/282 (41%), Gaps = 71/282 (25%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERG---------------------------------IT 252
+++A + + EA++ ++LI E+G +
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211
Query: 253 VRDSDYY--AFVNVLCKEHQPE---------EVCGLLRDVV------------------- 282
+R S Y +NVLCKE + + E G+ +VV
Sbjct: 212 IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRAR 271
Query: 283 -------ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++G P + F++ C +G+ +E L+ +L+ GL+ ++ ++L++ Y
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGY 331
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C+ +DKA A ++ + TY++ + LF +GRM +A + M+E ++ +
Sbjct: 332 CNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDA 391
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ I+++ C + ++A DEM+ G +P TY +I
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI 433
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 39/166 (23%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P + NAL+D I A L M V P++ T++ + Q CR GK E
Sbjct: 456 GLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEA 515
Query: 102 LGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN---------------- 140
LLD GI + YN +I YSK+GD AF +EM
Sbjct: 516 RQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQG 575
Query: 141 ------------------GRNLTPGFSTYSSILDGARRYEKTEVSD 168
+ +TP STY SI++ + E +D
Sbjct: 576 LCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEGND 621
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 205/430 (47%), Gaps = 9/430 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
L++ Y +G E ++++R GF +++ACNALL A+ + + LA +Y V+
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKS 218
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAA 131
G N +T +++ LC+ GK + V L + G+Y+ V YN +++ Y ++G A
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F ++ M G+ L PG TY+++++G + E + R++ M+ L P + + N +
Sbjct: 279 FGLVDCMA-GKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP-NAATFNPML 336
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
++ + AE +F + + ++ S+ G + A+ + + G+
Sbjct: 337 VESCRK-EDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N C+ + ++VERG + + + + C + +E
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L ++++G+ D + ++L+ YC + + KA++L + DV TY+ L+DG
Sbjct: 456 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 515
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K G ME+A ++ M ++ S SF I+++ C L + +A + DEM + G KP
Sbjct: 516 KVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV 575
Query: 431 TYKQVISGFM 440
T +I G++
Sbjct: 576 TCNTIIKGYL 585
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 190/447 (42%), Gaps = 29/447 (6%)
Query: 8 RDSQSDALSLVLDCYSHKGL---------FMDGL----------EVYRMMRVYGFVPAVS 48
R S+A LV DC + KGL ++GL V M G P +
Sbjct: 272 RGLVSEAFGLV-DCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG 108
N +L R+ ++ A ++ M++ GV P+ ++S + + R+G+ L +
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390
Query: 109 -----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
+ +V+Y ++I+ Y + D A NEM R TY+++L+G R +
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVE-RGCVMDVVTYNTLLNGLCRGKM 449
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ +D + MVE+ + P + +I G A +F+ ++ T
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTT--LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ K G +++A ++++ + R I + +N C E L ++ E
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+G P + + + G + + L+ ++ +G+ D ++L+ + D+
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVS 402
A L +E+ ++ TY+ +L G + GRM+EA + M + + S++ +++
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDE 429
+++A + HDEML+ G PD+
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRGFVPDD 714
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 201/437 (45%), Gaps = 11/437 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S S +++ Y MDG+ V +MR YG +P V +ALL+AL R + R L
Sbjct: 153 SSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLEL 212
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSK 124
+ +V GV P+ + +++V + LC F +++ S V YN+ I+ K
Sbjct: 213 FDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCK 272
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + + + L TY +++ G R ++ EV ++ M+E +P
Sbjct: 273 SKRVWEAVE-VKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331
Query: 185 -LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+SG +I+ L MG A + + + M+ +L K G+++EA ++
Sbjct: 332 AVSG---LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLF 388
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+++ERG+ D Y ++ + + + ++E G + + QC
Sbjct: 389 SVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKF 448
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
GK K E L ++DKGL +SL+ YC + + KA L+ ++ + + T+
Sbjct: 449 GKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTF 508
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ GL + +M EA ++FD M ELK++ + ++ +++ C +A + DEM+K
Sbjct: 509 TALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIK 568
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY+ +I+G
Sbjct: 569 KGLSPDTYTYRPLIAGL 585
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 182/415 (43%), Gaps = 37/415 (8%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F G+E+ M G+VP+ +A + L++ L + I A L + + GV PN F ++
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNS 370
Query: 88 VAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ LC++GK E ++ + SVM R L P
Sbjct: 371 MINSLCKTGKLE------EAELLFSVMAE-------------------------RGLNPN 399
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+ ++DG R K +V+ M+E + + + +I GK AE++
Sbjct: 400 DVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVY--SYNSMINCQCKFGKMKMAELL 457
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
FK D+ ++ T ++ K+G V +A ++YH ++ +GI + A + LC+
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
++ E L ++VE +P + + + C +G ELL ++ KGL D++
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYT 577
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM- 386
L+ CS ++ +A + LD Y LL G K+GR++EA+ M
Sbjct: 578 YRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMV 637
Query: 387 -KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ L+ + S+ +++S + + R + EM G +PD Y +I GF+
Sbjct: 638 GRGLQ-MDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFI 690
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 189/441 (42%), Gaps = 40/441 (9%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
++ +M G P L+D R+ ++ +A + M+ G+S ++++ + C
Sbjct: 387 LFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQC 446
Query: 94 RSGKFEVVLGL----LDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ GK ++ L +D G+ +V Y +I Y K G AF +EM G+ + P
Sbjct: 447 KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM-TGKGIAPNT 505
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK----------HFLSGNDY-VIQKLSD 197
T+++++ G + K + ++ MVE K+LP H GN + L +
Sbjct: 506 VTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDE 565
Query: 198 MGK------TYAAEMIFKRACD---------------EKIELQDDTC-GCMLKALSKEGR 235
M K TY + C K + D+ C +L+ KEGR
Sbjct: 566 MIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGR 625
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+KEA+ + RG+ + Y ++ ++ + LLR++ +G P + +
Sbjct: 626 IKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTI 684
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ G K+ E ++ +G + +S ++L+ +++A L ++ +
Sbjct: 685 LIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGE 744
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
+ TY LD L K+G ME A+++ + M + ++ ++ I++ C + + ++A K
Sbjct: 745 AIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAK 804
Query: 416 NHDEMLKMGHKPDEATYKQVI 436
D M+ +G PD TY I
Sbjct: 805 LLDVMIGIGMVPDCITYSTFI 825
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 153/375 (40%), Gaps = 43/375 (11%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P N L++ R+ A L M++ G+SP+ +T+ + LC +G+
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596
Query: 104 LLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
++ + + Y ++ + K+G A EM GR L +Y+ ++ GA
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMV-GRGLQMDLVSYAVLISGA 655
Query: 159 -------------RRYEKTEVSDRIVGLM-----VEKKLLPKHF-----LSGNDYV---- 191
+ K D ++ + ++ L K F + G YV
Sbjct: 656 LNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715
Query: 192 -----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ L G A+++FKR + T GC L L+KEG ++ A+Q+++ +
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM 775
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ G Y + C+ + +E LL ++ G +P + S F+ C +G
Sbjct: 776 LQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV 834
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH--IKIEKLKGSLDVATYD 364
++ +L +GL D + L+ C N ++D+A+ L + + LK + +TY
Sbjct: 835 DAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPT--QSTYH 892
Query: 365 VLLDGLFKDGRMEEA 379
L+ L + R+ +
Sbjct: 893 SLMVQLAQRARLTQV 907
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ G+ Q D + ++++D + G E + +M G+VP AL++ L+
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSSVM 114
+ + A L+ M+ PN T+ L + G E L L L ++V
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT 785
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
YN++I Y + G F A L+ M G + P TYS+ +
Sbjct: 786 YNILIRGYCQIGKFQEAAKLLDVMI-GIGMVPDCITYSTFI 825
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 99/248 (39%), Gaps = 9/248 (3%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
E+ R M G P L+D + ++ A + M+ +G PN T++ +
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723
Query: 92 LCRSG-----KFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
L ++G K L+ I + + Y +D +K+G+ A N M G
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS--FA 781
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+ ++ G + K + + +++ +M+ ++P I + G AA
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYST--FIYEYCKRGNVDAAMD 839
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+++ ++ ++ A G + A+Q+ + + RG+ S Y++ + L
Sbjct: 840 MWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLA 899
Query: 267 KEHQPEEV 274
+ + +V
Sbjct: 900 QRARLTQV 907
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 206/437 (47%), Gaps = 18/437 (4%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYG 71
L + Y G ++++ M+ P + CN LL++L R + + + +
Sbjct: 138 LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFN 197
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-GIYS----SVMYNLVIDFYSKKG 126
++ G+ PN T+++V C KF+ + L+ G Y+ +V YN ++D KKG
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKG 257
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
G A D L +M R L P +TY+ ++ G + + + ++ LM + LLP +
Sbjct: 258 RLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTY 316
Query: 187 GNDYVIQKLSDMGKTYAAEMIFK-RACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIY 243
+ +I L + G+ A FK R E ++L D ++ + ++ EA ++
Sbjct: 317 --NMLINGLCNEGRIEEA---FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+SE+G+ + V CKE + ++ + + E G+ P + + + C
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G E + + K + +DS ++++ C +++++A L K +D +Y
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ G FKDG ++ A++++D MKE +++ S+ ++ ++ LC + +A+ +E+L+
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 423 MGHKPDEATYKQVISGF 439
G PDE TY ++ G+
Sbjct: 552 SGLLPDETTYNTILHGY 568
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 207/466 (44%), Gaps = 40/466 (8%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+ ++V+ Y + F D +E +M Y P N +LDAL ++ + A L
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMD 268
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGD 127
M G+ PN+ T++++ C+ G + +++ ++++ YN++I+ +G
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK---HF 184
AF +EM N + L P +Y+++++G + K + +++ M EK + P H
Sbjct: 329 IEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387
Query: 185 LSGNDYVIQ-KLSDMGKTYAA--EMIFKRAC-----------------------DE---- 214
+ Y + K+ D T E F C DE
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+++ T +L+ L +E +++EA ++ +RG + + Y + K+ +
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ E+ IP + + + C GK ++ L+ +L+ GLL D ++++
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVS 393
YC ++KA H K+ + DV T ++LL GL +G +E+A+++F+ ++ + K +
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAID 627
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +++ LC L A EM + PD TY +I+
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 171/389 (43%), Gaps = 30/389 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ ++G + ++ M +P V + N L++ ++I A L M
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSE 376
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
GV PN T +++ + C+ GK + + + +SG V YN +I+ Y K G+ G
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGE 436
Query: 131 AFDRLNEMCNGR-NLTPGFSTYSSILDGARRYEKTE------VSDRIVGLMVEK----KL 179
AF ++EM GR N+ T ++IL R +K E S R G +++ L
Sbjct: 437 AFRTMDEM--GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ +F GN KL D EM K + T C++ L + G+ ++A
Sbjct: 495 IVGYFKDGNVDRALKLWD-------EMKEKEIIPSTV-----TYNCIIGGLCQCGKTEQA 542
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I + + E G+ ++ Y ++ C+E E+ +VE + P + +
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C +G ++ +L + + KG +D+ ++L+ C ++D A L ++E+ + D
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
TY+ ++ L GR+ EA M E
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLE 691
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 156/385 (40%), Gaps = 31/385 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ Y +G D M GF P N L++ + + A M R
Sbjct: 387 NIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGR 446
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ + T + + + LCR K E LL S V Y +I Y K G+
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +EM + + P TY+ I+ G + KTE + + ++E LLP + +
Sbjct: 507 ALKLWDEM-KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE--TTYNT 563
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ G A + + + TC +L+ L EG +++A+++++ +G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y + LCKE + ++ LL ++ E+ P + + + G+ +E E
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 311 ELLSAVLDKGLL------LDS-----------------FCCSSLMEYYCSNRQIDKAIAL 347
E +S +L+KG L LD S ++ C+ + A+ +
Sbjct: 684 EFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFK 372
+ ++ ++D +TY L+DGL K
Sbjct: 744 FGESKQKGITVDKSTYINLMDGLIK 768
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 20/234 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P + N +L R+ ++ A + MV + P+ FT +++ + LC G E
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L ++ + +V YN +I K+G AF+ L+EM + L P TY++I+
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGPDHYTYNAIIT 671
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ ++ + M+EK LP L D +T + + +
Sbjct: 672 ALTDSGRIREAEEFMSKMLEKGXLPXQVLQ---------LDXNETVVTSETSEESDSSSV 722
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ +K L EG+ K+A++I+ ++GITV S Y ++ L K +
Sbjct: 723 AYSE-----WIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 206/437 (47%), Gaps = 18/437 (4%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYG 71
L + Y G ++++ M+ P + CN LL++L R + + + +
Sbjct: 138 LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFN 197
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-GIYS----SVMYNLVIDFYSKKG 126
++ G+ PN T+++V C KF+ + L+ G Y+ +V YN ++D KKG
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKG 257
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
G A D L +M R L P +TY+ ++ G + + + ++ LM + LLP +
Sbjct: 258 RLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTY 316
Query: 187 GNDYVIQKLSDMGKTYAAEMIFK-RACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIY 243
+ +I L + G+ A FK R E ++L D ++ + ++ EA ++
Sbjct: 317 --NMLINGLCNEGRIEEA---FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+SE+G+ + V CKE + ++ + + E G+ P + + + C
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G E + + K + +DS ++++ C +++++A L K +D +Y
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ G FKDG ++ A++++D MKE +++ S+ ++ ++ LC + +A+ +E+L+
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 423 MGHKPDEATYKQVISGF 439
G PDE TY ++ G+
Sbjct: 552 SGLLPDETTYNTILHGY 568
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 206/466 (44%), Gaps = 40/466 (8%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+ ++V+ Y + F D +E +M Y P N +LD L ++ + A L
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMD 268
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGD 127
M G+ PN+ T++++ C+ G + +++ ++++ YN++I+ +G
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK---HF 184
AF +EM N + L P +Y+++++G + K + +++ M EK + P H
Sbjct: 329 IEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387
Query: 185 LSGNDYVIQ-KLSDMGKTYAA--EMIFKRAC-----------------------DE---- 214
+ Y + K+ D T E F C DE
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+++ T +L+ L +E +++EA ++ +RG + + Y + K+ +
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ E+ IP + + + C GK ++ L+ +L+ GLL D ++++
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVS 393
YC ++KA H K+ + DV T ++LL GL +G +E+A+++F+ ++ + K +
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAID 627
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +++ LC L A EM + PD TY +I+
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 171/389 (43%), Gaps = 30/389 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ ++G + ++ M +P V + N L++ ++I A L M
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSE 376
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
GV PN T +++ + C+ GK + + + +SG V YN +I+ Y K G+ G
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGE 436
Query: 131 AFDRLNEMCNGR-NLTPGFSTYSSILDGARRYEKTE------VSDRIVGLMVEK----KL 179
AF ++EM GR N+ T ++IL R +K E S R G +++ L
Sbjct: 437 AFRTMDEM--GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ +F GN KL D EM K + T C++ L + G+ ++A
Sbjct: 495 IVGYFKDGNVDRALKLWD-------EMKEKEIIPSTV-----TYNCIIGGLCQCGKTEQA 542
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I + + E G+ ++ Y ++ C+E E+ +VE + P + +
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C +G ++ +L + + KG +D+ ++L+ C ++D A L ++E+ + D
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
TY+ ++ L GR+ EA M E
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLE 691
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 155/385 (40%), Gaps = 31/385 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ Y +G D M GF P N L++ + + A M R
Sbjct: 387 NIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGR 446
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ + T + + + LCR K E LL S V Y +I Y K G+
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +EM + + P TY+ I+ G + KTE + + ++E LLP + +
Sbjct: 507 ALKLWDEM-KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE--TTYNT 563
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ G A + + + TC +L+ L EG +++A+++++ +G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y + LCKE + ++ LL ++ E+ P + + + G+ +E E
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 311 ELLSAVLDKGLLLDSF-----------------------CCSSLMEYYCSNRQIDKAIAL 347
E +S +L+KG L D S ++ C+ + A+ +
Sbjct: 684 EFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFK 372
+ ++ ++D +TY L+DGL K
Sbjct: 744 FGESKQKGITVDKSTYINLMDGLIK 768
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P + N +L R+ ++ A + MV + P+ FT +++ + LC G E
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L ++ + +V YN +I K+G AF+ L+EM + L P TY++I+
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGPDHYTYNAIIT 671
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ ++ + M+EK LP D V+Q D +T + + +
Sbjct: 672 ALTDSGRIREAEEFMSKMLEKGNLP-------DQVLQ--LDKNETVVTSETSEESDSSSV 722
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ +K L EG+ K+A++I+ ++GITV S Y ++ L K +
Sbjct: 723 AYSE-----WIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 199/438 (45%), Gaps = 10/438 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR-QNEIRLAS 67
+S S LV+ S+ L + + ++ GF+P V + NA+LD++ R + + A
Sbjct: 129 NSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAE 188
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFY 122
+Y M+ GVS N F+++++ + C +G E+ L + + + V YN VI Y
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K AF L M L P TY+ +++G R + E + ++ M K P
Sbjct: 249 CKLKRIDEAFKLLRSM-GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPD 307
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ ++ +G + A ++ + T ++ + K G + A++
Sbjct: 308 GVTY--NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + RG+ Y + +N ++ +E + +++ G+ P + + + C
Sbjct: 366 FDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCV 425
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ +E LL + KGL D S+++ +C +++D+A ++ ++ + S D T
Sbjct: 426 SGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAIT 485
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y L+ GL + R+ EA +F M ++ ++ +++ C +L +A+ HDEM+
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545
Query: 422 KMGHKPDEATYKQVISGF 439
K G PD TY +I+G
Sbjct: 546 KKGFLPDTVTYNVLINGL 563
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 191/433 (44%), Gaps = 32/433 (7%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
GL + M +P V N ++ A + I A L +M +G+ PN T+++V
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 91 ILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNL 144
LCR G+ E G+L D ++ V YN +++ Y K G+F A +EM NG L
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG--L 339
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTY 202
P TY+S+++ + + M + L P +G Y +I S G
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP----NGVTYTSLINGFSQKGFMD 395
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A I+ T +L GR++EAI + + +G++ Y +
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
C+ + + + ++VE+G P A+ S + C + + E +L +L+K LL
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVR 381
D F +SL+ YC +++A+ LH ++ K KG L D TY+VL++GL K R EA R
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIK-KGFLPDTVTYNVLINGLNKQARTREAKR 574
Query: 382 I---------------FDYMKE-LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ +D + E + S V ++ C + +A + + M+K
Sbjct: 575 LLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQ 634
Query: 426 KPDEATYKQVISG 438
KP+EA Y +I G
Sbjct: 635 KPNEAVYNVIIHG 647
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 173/403 (42%), Gaps = 43/403 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P N L++ + A L+ M+R+G+ P+ T++ + +C++G
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRA 362
Query: 102 LGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ D G+ + V Y +I+ +S+KG A+ +EM P TY+++L+
Sbjct: 363 MEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS-GFPPTIVTYNALLN 421
Query: 157 GARRYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVI-----QKLSDMGKTYAAEMIFK 209
G + E + +GL+ +E K L +S + + Q+L D AEM+ K
Sbjct: 422 GHCVSGRMEEA---IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL-DRAFQMNAEMVEK 477
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ I T +++ L ++ R+ EA ++ + + + + Y + +N CKE
Sbjct: 478 GVSPDAI-----TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEG 532
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
E L +++++G++P + + + + + +E + LL + + +
Sbjct: 533 DLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYD 592
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KE 388
+L+E CS+ + +A L+ G G M EA ++F+ M K
Sbjct: 593 TLIE-SCSDIEFKSVVA-------------------LIKGFCMKGLMNEADQVFESMIKR 632
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+ + + + +++ C + KA K + EM+ G P T
Sbjct: 633 NQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 145/341 (42%), Gaps = 28/341 (8%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ + G + + + R M G P V + + ++ R E+ A + MV G
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAF 132
VSP+ T+S + Q LC + L + S++ Y +I+ Y K+GD A
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ +EM + P TY+ +++G + +T + R++ + + +P D +I
Sbjct: 539 NLHDEMIK-KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITY--DTLI 595
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ SD IE + + ++K +G + EA Q++ + +R
Sbjct: 596 ESCSD------------------IEFK--SVVALIKGFCMKGLMNEADQVFESMIKRNQK 635
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
++ Y ++ C++ + L +++V+ G+IP + + V + +G +++ +
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLV 695
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ +L L D+ +L++ ID L ++ K
Sbjct: 696 IRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAK 736
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 207/451 (45%), Gaps = 24/451 (5%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C S S LV+ S G L + + +GF P V + NA+LDAL R++
Sbjct: 125 CSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSN 184
Query: 65 L-----ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM- 114
A ++ MVR+GVSPN +T++++ + + G E LG + GI +V+
Sbjct: 185 HRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVT 244
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRI 170
YN +ID KK A L M G + +Y+S+++G R E E+ + +
Sbjct: 245 YNTLIDASCKKKKVKEAMALLRAMAVG-GVAANLISYNSVINGLCGKGRMSEVGELVEEM 303
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
G K L+P + ++ G + ++ + + T ++ +
Sbjct: 304 RG----KGLVPDEVTY--NTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCM 357
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K G + A++I+ + RG+ + Y ++ C++ E +L +++ G+ P
Sbjct: 358 CKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSV 417
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + V C G+ +E +L ++++GL D S+++ +C R++ KA + +
Sbjct: 418 VTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEE 477
Query: 351 IEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLK 408
+ + KG L D TY L+ GL ++ EA +F + M+ ++ +++ C
Sbjct: 478 MVE-KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
EL KA++ HDEM++ G PD TY +I+G
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 193/439 (43%), Gaps = 32/439 (7%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G GL R M G P V N L+DA ++ +++ A L AM GV+ N +
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 85 WSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V LC G+ E+V + G+ V YN +++ + K+G+ L+EM
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP--KHFLSGNDYVIQK-LS 196
G+ L+P TY+++++ + + I M + L P + + + D QK L
Sbjct: 340 -GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCG-CMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ +EMI + G C L GRV+EA+ I + ERG+
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL------GRVQEAVGILRGMVERGLPPDV 452
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + C+E + + + ++VE+G +P + S + C + K E +L
Sbjct: 453 VSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ +GL D +SL+ YC + ++ KA+ LH ++ + D TY VL++GL K R
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572
Query: 376 MEEAVRIF-------------DYMKELKVVSSSSFVIV---VSRLCHLKELRKAMKNHDE 419
+ A R+ Y ++ S++ F V V C + +A +
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKT 632
Query: 420 MLKMGHKPDEATYKQVISG 438
ML+ HKP+ A Y +I G
Sbjct: 633 MLQRNHKPNAAIYNLMIHG 651
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 139/368 (37%), Gaps = 54/368 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLD-------------------- 55
+ ++D + KGL + +V M V GF P+V NAL+
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Query: 56 ---------------ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK--- 97
R+ E+ A + MV GV P+ T+S + Q LC K
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE 505
Query: 98 -FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
F++ ++ G+ V Y +I+ Y G+ A +EM R P TYS ++
Sbjct: 506 AFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ-RGFLPDNVTYSVLI 564
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFL--------SGNDY-----VIQKLSDMGKTY 202
+G + +T+V+ R++ + ++ +P S N++ +++ G
Sbjct: 565 NGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMN 624
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A+ +FK + M+ S+ G V +A +Y + A V
Sbjct: 625 EADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALV 684
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L +E +E+ LL++++ + A V +G V +L+ + GLL
Sbjct: 685 KALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLL 744
Query: 323 LDSFCCSS 330
D SS
Sbjct: 745 PDGGIHSS 752
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 129/312 (41%), Gaps = 44/312 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +++C G +E++ MRV G P L+D ++ + A + M+
Sbjct: 351 TTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIV 410
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G SP+ T++ + C G+ + ++ G+++ G+ V+ Y+ VI + ++ + G
Sbjct: 411 SGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGK 470
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF EM + + P TYSS+ I GL +++KL+
Sbjct: 471 AFQMKEEMVE-KGVLPDTVTYSSL---------------IQGLCLQQKLV---------- 504
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
A +F+ + + T ++ A +G + +A++++ + +RG
Sbjct: 505 ------------EAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y +N L K+ + + LL + +P + + + C ++K VE
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLI-ENCSNNEFKSVE 611
Query: 311 ELLSAVLDKGLL 322
L+ KGL+
Sbjct: 612 GLVKGFCMKGLM 623
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 203/439 (46%), Gaps = 11/439 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR-QNEIRL-A 66
+S S L++ YSH + + + + GF+P V + N++LDA+ R + ++L A
Sbjct: 139 NSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA 198
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDF 121
+Y M+R VSPN +T++++ + C G+ + LG + + + V YN +ID
Sbjct: 199 EEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y K G AF L M + + + P +Y+ I++G R + + I+ M K P
Sbjct: 259 YCKMGRIDEAFGLLKSM-SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ ++ G + A +I + T ++ ++ K + A++
Sbjct: 318 DEVTY--NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME 375
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + RG+ + Y ++ ++ E +L ++ E G+ P + + F+ C
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ +E ++ +++KGL D S+++ +C ++D+A + ++ + S D
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 495
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY L+ GL + R+ EA + M ++ + ++ +++ C +L KA+ HDEM
Sbjct: 496 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 555
Query: 421 LKMGHKPDEATYKQVISGF 439
+ G PD TY +I+G
Sbjct: 556 IHKGFLPDAVTYSVLINGL 574
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 186/447 (41%), Gaps = 31/447 (6%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++S + Q + +S ++++ +G + E+ M GF P N LL+
Sbjct: 271 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 330
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV- 113
++ A ++ MVR+GVSP+ T++ + +C++ + D G+ +
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y +ID +S++G A+ LNEM +P TY++ + G E+ E + +V
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MVEK L P + +I G+ A + + ++ + T +++ L +
Sbjct: 450 MVEKGLAPD--VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
R+ EA + + + G+ + Y +N C E + L +++ +G++P A+
Sbjct: 508 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + + + +E + LL ++ + + +L+E CSN + +A
Sbjct: 568 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE-NCSNIEFKSVVA------- 619
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRK 412
L+ G G M EA R+F+ M E + + +++ C L K
Sbjct: 620 ------------LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 667
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A + EM+ G P T +I
Sbjct: 668 AFNLYKEMIHSGFVPHTVTVITLIKAL 694
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 190/419 (45%), Gaps = 15/419 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ E + M+ G +P + CN+LL + N A LY M R + + +T++++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228
Query: 90 QILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + V + SG+ + V YN ++ Y G AA L M + +
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM-KRQKI 287
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKT 201
P TY S++ G + + E + +I MV+K L P + + + + DM
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y EM+ K I T ++ AL E R EA + I E+GI+ Y
Sbjct: 348 YKDEMLKK-----GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N C+ ++ L +++ G P + + K + KE ++L + +G+
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L D+ ++L++ +CSN + A L ++++K D T++ ++ G ++G++EEA
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD MK + SF ++S +++ A + +EML G P TY ++ G
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 166/408 (40%), Gaps = 46/408 (11%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P + N ++ + A + M R + P+ FT+ + +C+ G+
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 98 FEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E + + + S+V+YN +ID + KG+ A +EM + ++P STY+
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLK-KGISPTMSTYN 365
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++ ++T+ ++ ++ + EK + P + +I A ++
Sbjct: 366 SLIHALFMEQRTDEAECMIKEIQEKGISPDAITY--NILINGYCRCANAKKAFLLHDEML 423
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
I+ T +L LSK+ R+KEA ++ I+ G+ + A ++ C +
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVK 483
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL+D+ P + + + C +GK +E EL + +G+ D ++L+
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLD--VATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
Y +R+ D A ++ E L + V TY+ L+ GL K+ + A
Sbjct: 544 SGY--SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA----------- 590
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+EL K EM+ G PD+ TY +I G
Sbjct: 591 -----------------EELLK------EMVSKGMTPDDTTYFTLIEG 615
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 36/284 (12%)
Query: 189 DYVIQKLSDM-----------------------------------GKTYAAEMIFKRACD 213
DY+I+ DM +T AA +++
Sbjct: 155 DYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR 214
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+I+ T M+ L KEG++K+A + G+ Y V+ C + E
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEA 274
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+L + + P + ++ C +G+ +E ++ ++ KGL + ++L++
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+C+ +D A A ++ K S ++TY+ L+ LF + R +EA + ++E +
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ I+++ C +KA HDEML G KP + TY ++
Sbjct: 395 DAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 141/314 (44%), Gaps = 8/314 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + +++ M G P+ N L+D + + +AS M++ G+SP T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 85 WSLVAQILC---RSGKFEVVLG-LLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + L R+ + E ++ + + GI ++ YN++I+ Y + + AF +EM
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P TY+S+L + + + +D + + + +LP + N + S+
Sbjct: 424 -ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMF-NALIDGHCSNSN 481
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A E++ K K+ + T +++ +EG+V+EA +++ + RGI +
Sbjct: 482 VKGAFELL-KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ + ++ + ++++ G+ P + + V C + EELL ++ K
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600
Query: 320 GLLLDSFCCSSLME 333
G+ D +L+E
Sbjct: 601 GMTPDDTTYFTLIE 614
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L S K + ++++ + G +P NAL+D + ++ A L M R
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAF 132
V P++ T++ + Q CR GK E L D GI + +N +I YS++GD AF
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
NEM + P TY++++ G + ++ ++++ ++ MV K + P
Sbjct: 557 RVRNEMLD-TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 117/297 (39%), Gaps = 45/297 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D + +KG +D Y+ M G P +S N+L+ AL+ + A C+ +
Sbjct: 332 LIDGFCNKG-NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI------YSS-------------- 112
G+SP+ T++++ CR + L D SGI Y+S
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Query: 113 ----------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+M+N +ID + + AF+ L +M + + P T+++I+
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM-DRMKVPPDEVTFNTIMQ 509
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R K E + + M + + P H + +I S G A + D
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHI--SFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
T +++ L K A ++ + +G+T D+ Y+ + + K + P+E
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K+ R EA + ++ + E+G+ + +++ K ++ E L ++
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ + C +GK K+ ++ + + G+ + ++++ YCS+ +++ A
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
A+ +++ K D TY L+ G+ K GR+EEA +IF
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF---------------------- 314
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+EM++ G +P Y +I GF
Sbjct: 315 ------------EEMVQKGLRPSAVIYNTLIDGF 336
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 206/436 (47%), Gaps = 16/436 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYG 71
L + + Y G +++ M+ G P + CN LL+AL R + IRL+ ++
Sbjct: 127 LDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFT 186
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKG 126
++ GV N +++++ C +F + +L D G ++ YN ++D KKG
Sbjct: 187 DFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKG 246
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A D L +M N + L P +T++ ++ G R + + ++ LM + ++P +
Sbjct: 247 RLNEARDLLLDMKN-KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYH 244
+ +I G+ AE + R E ++L D T ++ + G +E ++
Sbjct: 306 --NVMISGFCKQGRI--AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ RG+ Y V K+ + +EV +R + E G +P + + ++ C G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K E L+ + KGL +D ++++ C R++D+A L + +D +Y
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ G FK + +A+R++D MKE +++ S ++ +++ LC + + +A+ DE+L+
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541
Query: 424 GHKPDEATYKQVISGF 439
G PDE TY +I G+
Sbjct: 542 GLVPDEITYNTIIHGY 557
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 211/472 (44%), Gaps = 40/472 (8%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G +++ ++++ + F + + V MR YG P N +LD L ++ + A
Sbjct: 192 GVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEA 251
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDF 121
L M G+ PN+ T++++ CR G + ++ +S + + YN++I
Sbjct: 252 RDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISG 311
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ K+G A RL E L+P TY+++++G + +E +++ M + + P
Sbjct: 312 FCKQGRIAEAM-RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370
Query: 182 ---------KHFLSGN-----DYVIQKLSDMG-----KTYAAEMIFK----------RAC 212
K F+ D ++K+ + G TY + + R
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430
Query: 213 DE----KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
DE +++ D T ML+AL +E ++ EA + RG V + Y + K
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ + L ++ E+ IP + + +A C GK + + L +L+ GL+ D
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMK 387
++++ YC Q++KA H K+ + DV T + LL GL K+G +E+A+++F+ ++
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWIS 610
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ K V + S+ ++ LC K +A +EM + PD TY ++ G
Sbjct: 611 KGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 10/327 (3%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+I+ EGR + ++++ +++ + KG + + R M G +P + N L+
Sbjct: 359 LIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHC 418
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSV 113
+ ++ A L M R G+ + T + + + LCR K + LL S V
Sbjct: 419 KVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV 478
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y +I Y K A +EM + + P TY+S++ G + KT + +
Sbjct: 479 SYGTLIIGYFKHEKASQALRLWDEM-KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDE 537
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
++E L+P + +I G+ A + ++ + TC +L L KE
Sbjct: 538 LLESGLVPDEITY--NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKE 595
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G +++A+++++ +G V Y + LCKE + E LL ++ E+ P
Sbjct: 596 GMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTY 655
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKG 320
+ + G+ K+ EE +S + +KG
Sbjct: 656 NAILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 160/391 (40%), Gaps = 34/391 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ + +G + + + M P V N L++ + L M
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGA 130
G+ PN T++++ + + GK + V + +SG + V YN +I ++ K G
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDE 425
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL----S 186
AF ++EM GR + + ++ + L E+KL H L
Sbjct: 426 AFRLMDEM--GRK--------------GLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR 469
Query: 187 GNDYVIQKLS---------DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
Y + ++S K A ++ +++I T M+ L + G+
Sbjct: 470 RRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+AI + E G+ + Y ++ C+E Q E+ +VE+ + P + + +
Sbjct: 530 QAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C +G ++ +L + + KG +D+ ++++ C ++ +A L ++E+ K
Sbjct: 590 CGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
D TY+ +L GL GRM++A + E
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 34/225 (15%)
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+++ ++ ++ E R EAI++ + + G + Y ++ LCK+ + E
Sbjct: 193 VKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEAR 252
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL D+ +G P + V C G KE ++ + ++ D++ + ++ +
Sbjct: 253 DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C +I +A+ L ++E LK S DV TY+ L++G F+ G EE ++ +
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE----------- 361
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
EM G KP+ TY ++ F+
Sbjct: 362 -----------------------EMEGRGMKPNSVTYNVMVKWFV 383
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 209/435 (48%), Gaps = 15/435 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L++ Y +G + ++++R GF+ +++ACN+LL L + + LA +Y +
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDF 128
R G+ N +T +++ LC+ K + V L GI++ V YN +I+ Y ++G
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G AF+ +N M +G+ L P TY+++++G + + + + M+ L P + N
Sbjct: 237 GEAFEVMNSM-SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDT-TTYN 294
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+++ + A+ IF + + ++ S+ G + +A+ + +
Sbjct: 295 TLLVESCRN-NNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL---SRFVASQCGKGK 305
G+ + Y +N C+ E + ++E+G CA+++ + + C K
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG---CALDVVAYNTILNGLCKKKL 410
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ L ++++G++ D ++L+ +C + KA++L + + D+ TY++
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNI 470
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+DG K ME+A +++ M K+ + S+ I+V+ C+L + +A + DEM++ G
Sbjct: 471 LIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG 530
Query: 425 HKPDEATYKQVISGF 439
KP T VI G+
Sbjct: 531 IKPTLVTCNTVIKGY 545
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 190/420 (45%), Gaps = 13/420 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V++ KG ++ V+ M G P + N LL R N A ++ M+ G
Sbjct: 261 VINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG 320
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
VSP+ ++S + + R+G + L + SG+ +V+Y ++I+ Y + G A
Sbjct: 321 VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEAL 380
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ ++M + Y++IL+G + + ++ + MVE+ ++P F + +
Sbjct: 381 EIRDKMLE-QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD-FCTFTTLIH 438
Query: 193 Q--KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
K +MGK + +F + I+ T ++ K +++A ++++ + R
Sbjct: 439 GHCKEGNMGKALS---LFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y VN C E L +++ +G P + + + C G + +
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E L ++ +G+ DS ++L+ + +DKA L K+E DV TY+V+L+G
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGF 615
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ GRM+EA I M E + S++ +++ L++A + HDEML+ G PD+
Sbjct: 616 CRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 18/285 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + +L+ K L D ++ M G VP L+ ++ + A L+G M
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIM 456
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDF 128
+ + P+ T++++ C++ + E L + I + Y ++++ Y G
Sbjct: 457 TQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFV 516
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG- 187
AF +EM + + P T ++++ G R +D +G M+ + + P
Sbjct: 517 SEAFRLWDEMIR-KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 188 --NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIY 243
N +V + D +M E LQ D T +L ++GR++EA I
Sbjct: 576 LINGFVKGEYMDKAFFLINKM-------ETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ ERGI S Y +N + +E ++++RG++P
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 15/419 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ E + M+ G +P + CN+LL + N A LY M R + + +T++++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228
Query: 90 QILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + V + SG+ + V YN ++ Y G AA L M + +
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM-KRQKI 287
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKT 201
P TY S++ G + + E + +I MV+K L P + + + + DM
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y EM+ K I T ++ AL E R EA + I E+GI+ Y
Sbjct: 348 YKDEMLKK-----GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N C+ ++ L +++ G P + + K + KE ++L + +G+
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L D ++L++ +CSN + A L ++++K D T++ ++ G ++G++EEA
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD MK + SF ++S +++ A + +EML G P TY ++ G
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 166/408 (40%), Gaps = 46/408 (11%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P + N ++ + A + M R + P+ FT+ + +C+ G+
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 98 FEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E + + + S+V+YN +ID + KG+ A +EM + ++P STY+
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLK-KGISPTMSTYN 365
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++ ++T+ ++ ++ + EK + P + +I A ++
Sbjct: 366 SLIHALFMEQRTDEAECMIKEIQEKGISPDAITY--NILINGYCRCANAKKAFLLHDEML 423
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
I+ T +L LSK+ R+KEA ++ I+ G+ + A ++ C +
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVK 483
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL+D+ P + + + C +GK +E EL + +G+ D ++L+
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLD--VATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
Y +R+ D A ++ E L + V TY+ L+ GL K+ + A
Sbjct: 544 SGY--SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA----------- 590
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+EL K EM+ G PD+ TY +I G
Sbjct: 591 -----------------EELLK------EMVSKGMTPDDTTYFTLIEG 615
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L S K + ++++ + G +P V NAL+D + ++ A L M R
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAF 132
V P++ T++ + Q CR GK E L D GI + +N +I YS++GD AF
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
NEM + P TY++++ G + ++ ++++ ++ MV K + P
Sbjct: 557 RVRNEMLD-TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 117/297 (39%), Gaps = 45/297 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D + +KG +D Y+ M G P +S N+L+ AL+ + A C+ +
Sbjct: 332 LIDGFCNKG-NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI------YSS-------------- 112
G+SP+ T++++ CR + L D SGI Y+S
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Query: 113 ----------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+M+N +ID + + AF+ L +M + + P T+++I+
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM-DRMKVPPDEVTFNTIMQ 509
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R K E + + M + + P H + +I S G A + D
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHI--SFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
T +++ L K A ++ + +G+T D+ Y+ + + K + P+E
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K+ R EA + ++ + E+G+ + +++ K ++ E L ++
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ + C +GK K+ ++ + + G+ + ++++ YCS+ +++ A
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
A+ +++ K D TY L+ G+ K GR+EEA +IF
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF---------------------- 314
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+EM++ G +P Y +I GF
Sbjct: 315 ------------EEMVQKGLRPSAVIYNTLIDGF 336
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 214/441 (48%), Gaps = 9/441 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C + + L++ Y +G E +R++R G++ +++ACN+LL L + + +
Sbjct: 41 CGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVE 100
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVI 119
LA ++ +VR G+ N +T +++ LC+ GKF+ V L +GIY+ V YN +I
Sbjct: 101 LAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLI 160
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
Y ++G AF+ +N M + + L P TY++I++G + + + I+ M+ L
Sbjct: 161 GAYCREGLLEEAFEIMNSMAD-KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + N +++ + A E IF + + + ++ S+ + +A
Sbjct: 220 SPDT-TTYNTLLVESCRRDNFSEAKE-IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA 277
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + + G+ + Y ++ C+ E + +++E+G + + + +
Sbjct: 278 LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 337
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C + + ++L ++++G L D + ++L+ +C + + KA++L + + D
Sbjct: 338 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
+ Y+ L+DG K G ME+A ++D M K+ + ++ I+++ C + + +A + D
Sbjct: 398 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 457
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M++ G KP T VI G+
Sbjct: 458 VMIEKGIKPTLVTCNTVIKGY 478
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 178/416 (42%), Gaps = 24/416 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG+ ++ L + G P + N LL R++ A ++G M+R GV P+ +
Sbjct: 208 KGILIEMLNI-------GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVS 260
Query: 85 WSLVAQILCRSGKFEVVL---------GLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+S + + R+ + L GL + +V+Y +++ Y + G+ A
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGL----VPDNVIYTVLMHGYCRNGNMLEALKIR 316
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+EM + Y++IL+G + + +D++ MVE+ LP + +I
Sbjct: 317 DEMLE-QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT--LIHGH 373
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G A +F I+ ++ K G +++A +++ + R I
Sbjct: 374 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 433
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N C E L ++E+G P + + + C G + +E L
Sbjct: 434 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 493
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ KG+ D ++L+ + +DKA K+EK D+ TY+V+++G + GR
Sbjct: 494 MIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGR 553
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
M+EA + M E + S++ +++ L +A + HDEML+ G PD+
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/170 (18%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++++ Y G + ++ +M G P + CN ++ R + A G M+
Sbjct: 438 ILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 497
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAA 131
GV+P+ +++ + R + ++ G+ ++ YN+V++ + ++G A
Sbjct: 498 GVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEA 557
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
L +M + + P STY+++++G + + R M+++ P
Sbjct: 558 ELVLRKMIE-KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 215/478 (44%), Gaps = 45/478 (9%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + A V+ + + +G E++ M G +S N LL L ++ ++
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLV 118
+ L +++ GV PN FT++L Q LC+ G+ + +V L++ G V+ YN +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I K F A L +M N L P TY++++ G + ++++RIVG V
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVN-EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+P F + +I L G+T A +F A + I+ ++K LS +G + E
Sbjct: 352 FVPDQFTYRS--LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A Q+ + +SE+G+ + VN LCK + GL++ ++ +GY P + +
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 299 SQCGKGKWKEVEELLSAVLDKGL---------LLDSFCCSS------------------- 330
+ K + E+L +LD G+ LL+ C +S
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 331 -------LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
L+E C R++D+A+ L +++ + D T+ L+DG K+G ++ A +F
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 384 DYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+E VSSS ++ I++ + A K EM+ PD TY+ ++ GF
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 186/494 (37%), Gaps = 79/494 (15%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + + V+ M Y P V + NA++ L A +Y M G++P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS------------------GIYSS----------- 112
+++++ + C++ + L LL++ G Y
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 113 -----------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+N ++ KKGD L+++ R + P TY+ + G +
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK-RGVLPNLFTYNLFIQGLCQR 264
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ + + R+VG ++E+ P N +I L K AE+ + +E +E
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNN--LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE--------- 272
T ++ K G V+ A +I G Y + ++ LC E +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 273 --------------------------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
E L ++ E+G IP + V C G
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ + L+ ++ KG D F + L+ Y + +++ A+ + + DV TY+ L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L+GL K + E+ + + M E + +F I++ LC ++L +A+ +EM
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 426 KPDEATYKQVISGF 439
PD T+ +I GF
Sbjct: 563 NPDAVTFGTLIDGF 576
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 157/369 (42%), Gaps = 29/369 (7%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S++G+ ++ ++ M G +P V N L++ L + + A L M+ G P+
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 83 FTWSLV----AQILCRSGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNE 137
FT++++ + L E++ +LD+G+ V YN +++ K F +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M + P T++ +L+ RY K + + ++ M K + P G +I
Sbjct: 522 MVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT--LIDGFCK 578
Query: 198 MGKTYAAEMIFKRACDE-KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A +F++ + K+ T ++ A +++ V A +++ + +R +
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y V+ CK L +++E G+IP L R + C + + E ++ +
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 317 LDKGLL---LDSFCCSSLMEYYCSNRQIDK--AIALHIKIEKL--KGSLDVATYDVLLDG 369
+ KGL+ +++ C +DK A + +E L K + Y++L DG
Sbjct: 699 VQKGLVPEAVNTIC------------DVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDG 746
Query: 370 LFKDGRMEE 378
L +D R+ +
Sbjct: 747 L-RDKRLRK 754
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 132/340 (38%), Gaps = 92/340 (27%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML--------KALSKE 233
KH LS VI+KL GK A E + ++++++ ML K ++
Sbjct: 37 KHTLSTYRSVIEKLGYYGKFEAMEEVL-------VDMRENVGNHMLEGVYVGAMKNYGRK 89
Query: 234 GRVKEAI-----------------------------------QIYHLISERGITVRDSDY 258
G+V+EA+ ++Y + +RGIT D
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGIT---PDV 146
Query: 259 YAF---VNVLCKEHQPEEVCGLLRDVVERG-------YIP-------------------- 288
Y+F + CK +P LL ++ +G Y
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 289 --------CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
C ++ + C KG KE E+LL V+ +G+L + F + ++ C +
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-VRIFDYMKELKVVSSSSFVI 399
+D A+ + + + DV TY+ L+ GL K+ + +EA V + + E S ++
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C ++ A + + + G PD+ TY+ +I G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 198/420 (47%), Gaps = 16/420 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNE---IRLASCLYGAMVRDGVSPNKFTWSL 87
G +++ M+ F P + CN LL+AL R N + + ++ V+ GV PN T+++
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNI 216
Query: 88 VAQILCRSGKFEVVLGLLDS-GIYS----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ C E L L++ G Y +V YN V+ K+ D L +M N
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNS- 275
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
L P +TY+ ++ G + + + + ++ LM K +LP + + +++ L D GK
Sbjct: 276 GLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTY--NTMVRGLCDEGKI- 332
Query: 203 AAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
E + R E +L D T ++ + A ++ + RG+ +
Sbjct: 333 -DEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ C E + +E ++ +VE G+ P + + C GK E +++ + KG
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L LD+F ++L+ C +Q+D A L +K K LD TY L+ G FKD + + A+
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++++ MKE +V++ ++ ++ LC + +A+ +E+L+ G PDE+T +I G+
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY 571
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 181/410 (44%), Gaps = 13/410 (3%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G P + N L+ + ++ A+ + M G+ P+ +T++ + + LC GK
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331
Query: 98 FEVVLGLLDSG-----IYSSVMYNLVID--FYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ + L D + V YN +ID F + D AAF + EM R + T
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSD--AAFKLVEEM-KARGVKENGVT 388
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++ ++ K + + ++ MVE P F + +I GK A +
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTY--NTMINGYCKAGKMAEAYKMMDE 446
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ ++L T +L + E ++ +A + +RG + + Y + K+ Q
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ L ++ E G + + + + C GK + + L+ +L+KGL+ D +
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKEL 389
++ YC ++KA H K+ + D+ T ++LL GL ++G +E+ + +F+ ++ +
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K + + ++ I++S C + L A EM +PD TY +++G
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 179/439 (40%), Gaps = 58/439 (13%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + VP V N L+D + A L M GV N T +++ + C GK
Sbjct: 342 MESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGK 401
Query: 98 FE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ V++ +++SG YN +I+ Y K G A+ ++EM GR
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM--GRK--------- 450
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS----GNDYVIQKLSDMGKTYAAEMI- 207
+ + ++ + + +EK+L + L+ Y++ ++ TY ++
Sbjct: 451 -----GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV-----TYGTLIMG 500
Query: 208 -FK-RACDEKIELQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
FK D ++L ++ T +++ L G+ +A+ + + E+G+
Sbjct: 501 YFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPD 560
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+S ++ C E E+ +VE P + + C +G ++ L +
Sbjct: 561 ESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFN 620
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ KG +D+ + ++ +C R+++ A L ++E D TY+ ++ GL K G
Sbjct: 621 TWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAG 680
Query: 375 RMEEA-------------VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
R EEA V+ D EL S + +S LC + + AMK +
Sbjct: 681 RTEEAEKLALKFAEKGQQVKTQDTSPELG-TSDMMYSEQISSLCTQGKYKDAMKLFQQAE 739
Query: 422 KMGHKPDEATYKQVISGFM 440
+ G ++ TY +++ G +
Sbjct: 740 QKGVSLNKYTYIKLMDGLL 758
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP S N ++ + + A + MV + P+ FT +++ + LCR G E
Sbjct: 556 GLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG 615
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L ++ I +V YN++I + K+ AFD + EM G+NL P TY++I+
Sbjct: 616 LTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM-EGKNLEPDRYTYNAIVT 674
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS-DMGKTYAAEMIFKRACDEK 215
G + +TE ++++ EK G Q S ++G ++M++
Sbjct: 675 GLTKAGRTEEAEKLALKFAEK---------GQQVKTQDTSPELG---TSDMMYSEQ---- 718
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ +L +G+ K+A++++ ++G+++ Y ++ L K +
Sbjct: 719 -----------ISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTT 767
Query: 276 GLLRDVV 282
LL +V
Sbjct: 768 SLLPFMV 774
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 194/417 (46%), Gaps = 9/417 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ LE+ M G P + N L++ L ++ A L MV G PN+ T+ V
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 90 QILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
++C+SG+ + + LL + I +V Y+++ID K G AF+ NEM +
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGF 294
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TY++++ G + + +++ M+++K+ P + +I GK A
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN--VVTFSVLIDSFVKEGKLREA 352
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + K I T ++ KE R++EAIQ+ L+ +G + +N
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CK ++ ++ L R++ RG I + + V C GK + ++L ++ + + D
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
L++ C N +++KA+ + KIEK K LD+ Y +++ G+ ++++A +F
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 385 YMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ V + + ++ I++S LC L KA +M + GH PDE TY +I +
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 194/422 (45%), Gaps = 21/422 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++++R M +P V N L A+ + + L L M G++ + +T S++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 90 QILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
CR K + D+ I+++++ L ++ + + DR+ EM
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE--CRVSEALELVDRMVEMG 188
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P T +++++G K + ++ MVE P G V+ + G
Sbjct: 189 H----KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP--VLNVMCKSG 242
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+T A + ++ + I+L ++ L K+G + A +++ + +G Y
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ C + ++ LLRD+++R P + S + S +GK +E ++LL ++ +
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEE 378
G+ ++ +SL++ +C ++++AI + + + KG D+ T+++L++G K R+++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQM-VDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +F M V++++ ++ +V C +L A K EM+ +PD +YK ++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 438 GF 439
G
Sbjct: 482 GL 483
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 136/308 (44%), Gaps = 8/308 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ + G + DG ++ R M P V + L+D+ ++ ++R A L M++ G++PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++ + C+ + E + ++D G +M +N++I+ Y K +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + R + TY++++ G + K EV+ ++ MV +++ P + ++ L
Sbjct: 428 EM-SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD--IVSYKILLDGLC 484
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
D G+ A IF + K+EL ++ + +V +A ++ + +G+ +
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ LC++ + L R + E G+ P + + + + G EL+ +
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 317 LDKGLLLD 324
G D
Sbjct: 605 KSSGFPAD 612
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ +N LC E + E L+ +VE G+ P + L+ V C GK + L+ ++
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ G + ++ C + Q A+ L K+E+ LD Y +++DGL KDG ++
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 378 EAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
A +F+ M E+K + ++ ++ C+ K +M+K P+ T+ +
Sbjct: 281 NAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 436 ISGFM 440
I F+
Sbjct: 340 IDSFV 344
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ S+R ++ RD V + + ++ L RD+++ +P ++ +R ++
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGI-----KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAK 100
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+++ V L + KG+ + S ++ +C R++ A + KI KL D
Sbjct: 101 TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
++ LL+GL + R+ EA+ + D M E+ + + +V+ LC ++ A+ D M+
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 422 KMGHKPDEATYKQVIS 437
+ G +P+E TY V++
Sbjct: 221 ETGFQPNEVTYGPVLN 236
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 206/463 (44%), Gaps = 42/463 (9%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S L++ Y +G+ D LE +R+M + GF P+V CN LL L ++ ++
Sbjct: 96 SNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG-IYSSVMYNLVIDFYSK 124
+ M+ V P+ T++++ +LC GK + LL +SG + S V YN V+++Y K
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215
Query: 125 KGDFGAAFDRLNEM-------------------CNG---------------RNLTPGFST 150
KG + AA + +++M C R ++P T
Sbjct: 216 KGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEIT 275
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+SI++G + K + RI M LLP + ++ N + D G A I +
Sbjct: 276 YNSIINGFVKEGKIGAATRIFQEMSMLNLLP-NCVTYNALIDGHCHD-GNFEQALTILEM 333
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + + +L L + + + + I + G+ V Y A ++ LC+
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGL 393
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E LL +++ G +P + S + C GK K V+E++ + GL +S ++
Sbjct: 394 LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL- 389
L+ YC + +A +++ + ++ + +VL+ L KDG++ A F +M ++
Sbjct: 454 LIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIG 513
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
V +S +F +++ + KA DEM+K GH P TY
Sbjct: 514 NVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTY 556
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 12/310 (3%)
Query: 142 RNLTPGFSTYSSILDGARRYEKTEV-----------SDRIVGLMVEKKLLPKHFLSGNDY 190
R+LT S + IL AR YE + S + G ++ L K S D
Sbjct: 44 RHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDL 103
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ G A F+ TC +L L KE +V + + R
Sbjct: 104 LIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARR 163
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ S + +NVLC E + ++ LL+ + E GY+P + + + C KG++K
Sbjct: 164 VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAAL 223
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+ + KG+ D+ + L++ C N + K L K+ K S + TY+ +++G
Sbjct: 224 ELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGF 283
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G++ A RIF M L ++ + ++ ++ CH +A+ + M G KP+E
Sbjct: 284 VKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNE 343
Query: 430 ATYKQVISGF 439
+Y +++G
Sbjct: 344 VSYSALLNGL 353
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/429 (19%), Positives = 164/429 (38%), Gaps = 45/429 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G +++ M + +P NAL+D A + M G
Sbjct: 279 IINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATG 338
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAF 132
PN+ ++S + LCR KFE+ +L + I + Y +ID + G +
Sbjct: 339 PKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESV 398
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L++M + P T+S +++G R K + I+ M + L P + +I
Sbjct: 399 KLLDKMLKD-GVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT--LI 455
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
G A ++ + C ++ +L K+G+V A +H +S+ G
Sbjct: 456 YNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV 515
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N + + ++++ G+ P + + C GK+KE + L
Sbjct: 516 PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRL 575
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L K+ + ++D TY+ +L FK
Sbjct: 576 LD-----------------------------------KLHYIPSAVDTVTYNTILVETFK 600
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH-KPDEA 430
G + +AV +FD M + V+ S ++ I+ + L ++ A+ + +L G P++
Sbjct: 601 SGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKV 660
Query: 431 TYKQVISGF 439
Y + G
Sbjct: 661 MYTTFVDGL 669
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 164/402 (40%), Gaps = 39/402 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKFT 84
G+ D + ++ M +P + L R+ ++ A YG ++ G VSP K
Sbjct: 602 GMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVM 661
Query: 85 WSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
++ L R+G+ + L + +G+ + ++ N++++ YS+ G A D M
Sbjct: 662 YTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMW 721
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---DYVIQKLS 196
+G ++P +TY+ +L G + + + +M+ + P + + +
Sbjct: 722 SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML 781
Query: 197 DMGKTYAA--------------EMIFKRACDEK-----------IELQD-----DTCGCM 226
D+G M+ + C+ + L D T +
Sbjct: 782 DVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSI 841
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ LS+ V+E+ + H + ERG Y A VN +C+ L ++ G
Sbjct: 842 ISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+ S V GK +E + +L +L K L+ ++LM +C N + +A+
Sbjct: 902 SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK 961
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L ++ LDV Y+VL+ GL DG + A++++ +K+
Sbjct: 962 LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQ 1003
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 171/417 (41%), Gaps = 19/417 (4%)
Query: 35 YRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
+ M G VP + +++ A ++ M++ G P+ FT+ + + LCR
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565
Query: 95 SGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+GKF+ LLD Y +V YN ++ K G A +EM RN+ P
Sbjct: 566 AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQ-RNVLPDSY 624
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY+ I G R K + G ++ K + + +V L G++ AA + F
Sbjct: 625 TYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFV-DGLFRAGQSKAA-LYF- 681
Query: 210 RACD--EKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS--DYYAFVN 263
C+ EK L D +L S+ G++ +A I+ ++ GIT+ S Y ++
Sbjct: 682 --CEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWS-GITISPSLATYNILLH 738
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
K+ + L ++ G P + + C +LL +L G+ +
Sbjct: 739 GYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAV 798
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D + L+ YC ++ KA L + D+ T+D ++ L + ++E+ +
Sbjct: 799 DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLL 858
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + ++ +V+R+C + + A K DEM +G + ++ G
Sbjct: 859 HEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGL 915
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 205/432 (47%), Gaps = 11/432 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++DCY G +GL + M G V ++L+ A + +I L+ M+R
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
VSPN T+S + Q L R+G++ E++ + G+ V+ Y ++ D K G G
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGD 308
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L+ M + PG TY+ +++G + ++ + + +V +MV+K P +
Sbjct: 309 AIKVLDLMVQ-KGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTY--NT 365
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISE 248
+++ L GK + A ++K EK ++ D TC +++ L KEGRV +A +I+ + E
Sbjct: 366 LLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVE 425
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y + + E L + VE G+ P +M S + C
Sbjct: 426 MGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSV 485
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + D G+ ++LM C +++A +L ++ + ++DV ++++++D
Sbjct: 486 ARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIID 545
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K G ++ A + M + +V + +F I+++R L L +AM +++M+ GH P
Sbjct: 546 GTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVP 605
Query: 428 DEATYKQVISGF 439
+ ++ G+
Sbjct: 606 GVVVFDSLLKGY 617
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 194/436 (44%), Gaps = 49/436 (11%)
Query: 15 LSLVLDCYSHKGLFMDGLEVY-RMMRVYG-FVPAVSACNALLDALYRQNEIRLASCLYGA 72
L+LVL + G + ++ +M R Y VP N L++ + + A L+ A
Sbjct: 115 LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEA 174
Query: 73 MVRDG-VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKG 126
M + G PN T+S++ C+SG+ LGLL+ G+ + V +Y+ +I + +G
Sbjct: 175 MKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D + +EM R ++P TYS ++ G R + + ++ M + + P
Sbjct: 235 DIETGRELFDEMLR-RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRP----- 288
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
D V + L D C K GR +AI++ L+
Sbjct: 289 --DVVAYTV----------------------LADGLC--------KNGRAGDAIKVLDLM 316
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++G Y VN LCKE + ++ G++ +V++G P A+ + + CG GK
Sbjct: 317 VQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKI 376
Query: 307 KEVEELLSAVLDKGLLL--DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
E +L +L + + D F C++L++ C ++ A +H + ++ ++ TY+
Sbjct: 377 HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYN 436
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L++G ++ EA++++ Y E +S ++ ++++ LC ++ L A +M
Sbjct: 437 FLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDS 496
Query: 424 GHKPDEATYKQVISGF 439
G +P Y +++
Sbjct: 497 GIRPTVIDYNALMTSL 512
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 182/422 (43%), Gaps = 20/422 (4%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ VY M +P ++ +AL ++ + A + M + G N + +LV +
Sbjct: 62 VSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKG 121
Query: 92 LCRSGKFEVVLGLL-------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CRSG+ + + L D + V YN +++ + K A M G +
Sbjct: 122 FCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDC 181
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV----IQKLSDMGK 200
P TYS ++D Y K+ +GL+ E + + L + +V I G
Sbjct: 182 RPNLVTYSVLIDC---YCKSGEVGEGLGLLEE---MEREGLKADVFVYSSLISAFCGEGD 235
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+F K+ T C+++ L + GR +EA ++ ++ RG+ Y
Sbjct: 236 IETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTV 295
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK + + +L +V++G P + + V C + + + ++ ++ KG
Sbjct: 296 LADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALH--IKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
D+ ++L++ C +I +A+ L + EK DV T + L+ GL K+GR+ +
Sbjct: 356 KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHD 415
Query: 379 AVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A RI M E+ + + ++ ++ ++L +A+K ++ G P+ TY +I+
Sbjct: 416 AARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475
Query: 438 GF 439
G
Sbjct: 476 GL 477
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 24/275 (8%)
Query: 179 LLPKHFLSGNDYVIQ----KLSDMGKTYAAEMIFKRACDEKI--ELQDDTCGCMLKALSK 232
++PK L+ + + LSD A +F R D + C ++ L K
Sbjct: 1 MIPKRLLNNSSSIAHTQPHSLSD------AVSLFHRTIDNDPTSPPSEPACSTLIDNLRK 54
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+ + +YH + + R + A H P +L + +RG+
Sbjct: 55 ARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYN 114
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDK--GLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
L+ + C G+ + L S + ++ D ++L+ +C +++ +A L
Sbjct: 115 LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVL--- 171
Query: 351 IEKLKGSLD----VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRL 404
E +K D + TY VL+D K G + E + + + M E + + + FV ++S
Sbjct: 172 FEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM-EREGLKADVFVYSSLISAF 230
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ + DEML+ P+ TY ++ G
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGL 265
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 197/480 (41%), Gaps = 87/480 (18%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+ + +++ Y +G+ +G +R + G VP+V +CN LL+ L + N I
Sbjct: 172 CQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRID 231
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVI 119
+Y M R G+ PN +T++++ + C+ G + V L + G V YN +I
Sbjct: 232 QCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLI 291
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
Y +KG AF L + RN+ P +Y+++++G + K + ++ M+ + L
Sbjct: 292 SCYCRKGRLDDAF-YLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGL 350
Query: 180 LPKHFLSGND----YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
P +S N Y + ++ EMI C +K+ TC +++ KE R
Sbjct: 351 NPD-IVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKV-----TCQVLIEGYRKEAR 404
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNV-LCKEHQPEEVCGLLRDVVERGYI------- 287
+ A+ + + G+ + +D Y ++ V +C+E +P LL+ + +RGY+
Sbjct: 405 IVSALNLVVELERFGVPI-STDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYN 463
Query: 288 ----------------------------PCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
P A+ + C + E E L+ +L
Sbjct: 464 KLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQS 523
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+L D C +LM YC R I KA L
Sbjct: 524 GMLPDPDICRALMHVYCKERDIGKAETL-------------------------------- 551
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + KE ++ S S+ +V C + + M+ D MLK+G P+ T++Q+I G
Sbjct: 552 --LQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGL 609
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 140/344 (40%), Gaps = 12/344 (3%)
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
F+ +L + V++++++ Y ++G F ++ P + + +L+G
Sbjct: 165 FQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEV-GCVPSVISCNCLLNG 223
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRACD 213
+ + + ++ M + P N Y L+ + G +R +
Sbjct: 224 LLKLNRIDQCWQVYKEMARVGIHP------NSYTFNILTHVFCQDGDVDKVNDFLERMEE 277
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
E E T ++ ++GR+ +A +Y ++ R + Y A +N LCKE + E
Sbjct: 278 EGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVRE 337
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ RG P + + + C +GK +E LL ++ G+ D C L+E
Sbjct: 338 AHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIE 397
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
Y +I A+ L +++E+ + YD L+ + ++GR A + + + V
Sbjct: 398 GYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVP 457
Query: 394 SSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ LC + A+ EM KP TYK +I
Sbjct: 458 GVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALI 501
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 203/439 (46%), Gaps = 12/439 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR-QNEIRLAS 67
+S S LV+ YS L L + + + +GF+P V + NA+LDA R + I A
Sbjct: 131 NSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFY 122
++ M++ VSPN FT++++ + C +G +V L D + + V YN +ID Y
Sbjct: 191 NVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGY 250
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLP 181
K F+ L M + L P +Y+ +++G R E+S V + K+
Sbjct: 251 CKLRKIDDGFELLRSMA-LKGLEPNLISYNVVINGLCREGRMKEIS--FVLTEMNKRGYS 307
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
++ N +I+ G + A ++ + T ++ ++ K G + A +
Sbjct: 308 LDEVTYNT-LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE 366
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ RG+ + Y V+ ++ E +L+++++ G+ P + + + C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK + +L + +KGL D S+++ +C + +D+A+ + K+ D
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY L+ G + R +EA +FD M + + ++ +++ C +L+KA++ H+EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546
Query: 421 LKMGHKPDEATYKQVISGF 439
++ G PD TY +I+G
Sbjct: 547 VEKGVLPDVVTYSVLINGL 565
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 184/430 (42%), Gaps = 26/430 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L + M G +P V N L+D + +I L +M G+ PN ++++V
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 91 ILCRSGKFE---VVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LCR G+ + VL ++ YS V YN +I Y K+G+F A EM L+
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLS 342
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+S++ + + + M + L P ++ S G A
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNE--RTYTTLVDGFSQKGYMNEAY 400
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ K D T ++ G++ +AI + + E+G+T Y ++
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+ + +E + R +V +G P + S + C + + KE +L +L GL D
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIF- 383
F ++L+ YC + KAI LH ++ + KG L DV TY VL++GL K R EA R+
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVE-KGVLPDVVTYSVLINGLNKQARTREAKRLLL 579
Query: 384 ------------DYMKELKVVSSSSFVIVVSRL---CHLKELRKAMKNHDEMLKMGHKPD 428
Y ++ S+ F VVS + C + +A + + ML+ HKPD
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPD 639
Query: 429 EATYKQVISG 438
Y +I G
Sbjct: 640 GTAYNVMIHG 649
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 173/412 (41%), Gaps = 38/412 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y +G F L ++ M +G P+V +L+ ++ + + A+ M G+ PN
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379
Query: 82 KFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+ T++ + + G + V+ ++D+G SV+ YN +I+ + G A L
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + LTP +YS++L G R + + R+ MV K + P + +IQ
Sbjct: 440 DM-KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS--LIQGFC 496
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ +T A +F + + T ++ A EG +++AIQ+++ + E+G+
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM---------------ELSRFVASQC 301
Y +N L K+ + E LL + +P + + + C
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
KG E +++ ++L+K D + ++ +C I KA +L+ ++ K L
Sbjct: 617 MKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTV 676
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKA 413
T L+ L K+G++ E +S + V R C L E +A
Sbjct: 677 TVIALVKTLHKEGKVNEL---------------NSVIANVLRSCELSEAEQA 713
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 204/447 (45%), Gaps = 55/447 (12%)
Query: 9 DSQSDALSLVLDCYSHKGLF---MDGLE------VYRMMRVYGFVPAVSACNALLDALYR 59
D + L LD +++ L +DG + V M G P V+ N L+ AL R
Sbjct: 164 DIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCR 223
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVM 114
++IR A + M G+SP++ T++ + Q G L + + + S+V
Sbjct: 224 AHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVT 283
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
N+++ Y K+G ++EM N P T++S+++G R + + I+ +M
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSN-EGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+++ P F TY + +IF L K G
Sbjct: 343 LQEGFDPDIF----------------TYNS-LIF--------------------GLCKLG 365
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
V+EA++I + + R + Y ++ LCKE+Q EE L R + +G +P +
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C + EL + KG D F + L++ CS ++++A++L ++E
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRK 412
S +V TY+ L+DG K+ R+EEA IFD M EL+ +S + ++ ++ LC + + +
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM-ELQGISRNVVTYNTLIDGLCKNRRVEE 544
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A + D+ML G KPD+ TY +++ F
Sbjct: 545 AAQLMDQMLMEGLKPDKFTYNSLLTYF 571
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 188/440 (42%), Gaps = 11/440 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++ + +G L + M G + N L+ ++ I
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDF 121
M +G P++FT++ + LCR G + L +LD G + YN +I
Sbjct: 301 LSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G+ A + LN+M R+ +P TY++++ + + E + + ++ K +LP
Sbjct: 361 LCKLGEVEEAVEILNQMI-LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 419
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +IQ L A +F+ + + T ++ +L GR++EA+
Sbjct: 420 D--VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALS 477
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + G + Y ++ CK + EE + ++ +G + + + C
Sbjct: 478 LLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ +E +L+ +L +GL D F +SL+ Y+C I KA + + D
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSV 597
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY L+ GL K GR+E A R+ + +LK V++ ++ V+ L K +A++ E
Sbjct: 598 TYGTLILGLSKAGRVELASRLLRTV-QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFRE 656
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G PD TYK V G
Sbjct: 657 MMEKGDPPDAVTYKVVFRGL 676
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 9/330 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ E+ R++ G +P V N+L+ L N RLA L+ M G P++FT++++
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463
Query: 90 QILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC G+ E L LL SG +V+ YN +ID + K A + +EM + +
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM-ELQGI 522
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+ TY++++DG + + E + +++ M+ + L P F + ++ G A
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS--LLTYFCRAGDIKKA 580
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
I + E T G ++ LSK GRV+ A ++ + +G+ + Y +
Sbjct: 581 ADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKA 640
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC-GKGKWKEVEELLSAVLDKGLLL 323
L +E + E L R+++E+G P A+ C G G E + L + DKG L
Sbjct: 641 LFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLP 700
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
D L E C+ D I L ++ K
Sbjct: 701 DFSSFLMLAEGLCALSMEDTLIKLVNRVMK 730
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 165/403 (40%), Gaps = 52/403 (12%)
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSG------IYSSVMYNLVIDFYSKKGDFGAAFD 133
P FT + L R + +L LLD + SSV+Y V+ K G FG+
Sbjct: 67 PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126
Query: 134 RLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
L EM C R T+ +++ ++E + + +V +M E+ L + N
Sbjct: 127 VLQEMKHTGCEIRR-----GTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYN- 180
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L D K E++ R I+ T ++KAL + +++ AI + +
Sbjct: 181 FLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSY 240
Query: 250 GITVRDSDYYAF-------------------------------VNVL----CKEHQPEEV 274
G++ + + VNVL CKE + EEV
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ ++ G+ P + V C G K E+L +L +G D F +SL+
Sbjct: 301 LSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
C ++++A+ + ++ S + TY+ L+ L K+ ++EEA + + ++
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420
Query: 395 -SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+F ++ LC R AM+ +EM G PDE TY +I
Sbjct: 421 VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 331 LMEYYCSNRQIDKAIAL-HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L+E Y D+A+A+ I E+ LD TY+ LL+ L DG + V I +
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVS 204
Query: 390 KVVSS--SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + ++F I++ LC ++R A+ +EM G PDE T+ ++ GF+
Sbjct: 205 RGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFI 257
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 195/416 (46%), Gaps = 9/416 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D E + MM+ G +P V ACN +L + N A LY M R + + T++++
Sbjct: 139 DAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMI 198
Query: 90 QILCRSGKFEVV---LGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + +GL+++ GI +V+ YN +I Y +G A + ++ R +
Sbjct: 199 NVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA-RMIFDLMKCRGV 257
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY S + G + K E + ++ M E L P + +I + G A
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY--NTLIDGYCNKGNLEMA 315
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ E + T ++ AL + ++ EA I +SE+G+ Y +N
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C+ ++ L +++ +G P + + + +G+ K+ ++L ++ KG+ D
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPD 435
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L++ +C+N +D+A A+ +++++K D T++ L+ G ++G++E A + +
Sbjct: 436 LIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK + S+ ++S +++ A + DEML +G P TY +I G
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 179/432 (41%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ +G E +M G P V N ++ + + A ++ M
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDF 128
GV P+ +T+ +C+ GK E G+L+ G+ ++V YN +ID Y KG+
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AFD ++M L P STY+ ++ K + +D I+ M EK L+P
Sbjct: 313 EMAFDYRDKMVR-EGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY-- 369
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I G A + + I+ T ++ LSK GR+K+A ++ I
Sbjct: 370 NILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR 429
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI + A ++ C + +L+++ + +P + + + +C +GK +
Sbjct: 430 KGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEA 489
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EL+ + +G+ D HI +Y+ L+
Sbjct: 490 ARELIEEMKSRGIKPD-----------------------HI------------SYNTLIS 514
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K G M++A R+ D M + + ++ ++ LC +E A + EM+ G P
Sbjct: 515 GYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITP 574
Query: 428 DEATYKQVISGF 439
++ TY +I G
Sbjct: 575 NDNTYLSLIEGI 586
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 201/430 (46%), Gaps = 11/430 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G V + G+ P N L+ L + E++ + + +
Sbjct: 47 TLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKV 106
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
V G ++ +++ + LC+ G+ L LL S + VMYN +ID K
Sbjct: 107 VAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+D +EM + R + P TYS+++ G + + ++ M+ K + P +
Sbjct: 167 NEAYDLYSEM-DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTY-- 223
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L GK A+ + E ++ + ++ G V+ A Q++H + +
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G+ Y ++ LCK + +E LLR+V+ + +P + S + C G+
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITS 343
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+LL + +G D +SL++ C N+ +DKA AL +K+++ + TY L+D
Sbjct: 344 ALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID 403
Query: 369 GLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GL K GR + A ++F ++ K + ++ ++ +++S LC L +A+ +M + G
Sbjct: 404 GLCKGGRHKNAQKLFQHLLVKGCR-INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCI 462
Query: 427 PDEATYKQVI 436
PD T++ +I
Sbjct: 463 PDAVTFEIII 472
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 159/361 (44%), Gaps = 8/361 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L++ RM+ P V N ++D L + + A LY M G+ PN T+S +
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C +G+ GLL+ I ++ Y +++D K+G A + L M +
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTK-EGVK 252
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P +Y++++DG + + + ++ MV+K + P + + +I +L + A
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVY--SYNIMIDRLCKSKRVDEAM 310
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + + + T ++ K GR+ A+ + + RG Y + ++ L
Sbjct: 311 NLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDAL 370
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK ++ L + ERG P + + C G+ K ++L +L KG ++
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINV 430
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ + ++ C +D+A+A+ K+E+ D T+++++ LF+ + ++A ++
Sbjct: 431 WTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHE 490
Query: 386 M 386
M
Sbjct: 491 M 491
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 145/314 (46%), Gaps = 17/314 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G + + +M G P V + N L+D E++ A ++ MV+
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGA 130
GV+PN ++++++ LC+S + + + LL ++ ++V Y+ +ID + K G +
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITS 343
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L EM + R TY+S+LD + + + + + M E+ + P +
Sbjct: 344 ALDLLKEMYH-RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTY--TA 400
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ A+ +F+ + + T M+ L KEG + EA+ + + E G
Sbjct: 401 LIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF--VASQCGKGKWKE 308
+ + L ++ Q ++ LL +++ A +L RF + + +
Sbjct: 461 CIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI-------AKDLLRFRDFHGERSPNENDK 513
Query: 309 VEELLSAVLDKGLL 322
E+LL ++ KGLL
Sbjct: 514 AEKLLHEMIAKGLL 527
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+L L K G + A+++ +I +R Y ++ LCK+ E L ++
Sbjct: 119 ATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
RG P + S + C G+ E LL+ ++ K + + + + LM+ C ++ +
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKE 238
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A L + K +V +Y+ L+DG G ++ A ++F M + V + S+ I++
Sbjct: 239 AKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMID 298
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
RLC K + +AM E+L P+ TY +I GF
Sbjct: 299 RLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 118/321 (36%), Gaps = 68/321 (21%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ + EG + + ++D Y G + +++ M G P V + N ++D L +
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSK 304
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDF 121
+ A L ++ + PN T+S +ID
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYS------------------------------SLIDG 334
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ K G +A D L EM + R TY+S+LD + + + + + M E+ + P
Sbjct: 335 FCKLGRITSALDLLKEMYH-RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ TY A L D C K GR K A +
Sbjct: 394 NKY----------------TYTA-------------LIDGLC--------KGGRHKNAQK 416
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + +G + Y ++ LCKE +E + + E G IP A+ + S
Sbjct: 417 LFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLF 476
Query: 302 GKGKWKEVEELLSAVLDKGLL 322
K + + E+LL ++ K LL
Sbjct: 477 EKDQNDKAEKLLHEMIAKDLL 497
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P ME ++ V S + L + KG+ D F + L+ +C Q+ + +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------SFVIVV 401
KI KL + T + L+ GL G +++++ D KVV+ S+ ++
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHD-----KVVAQGFQMDQVSYATLL 122
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC + E R A+K + +P+ Y +I G
Sbjct: 123 NGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGL 160
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 194/430 (45%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++++C+ + L V M G+ P + N+LL+ N I A L G MV
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ FT++ + L R + + L+D + V Y +V++ K+GD
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M G+ + PG Y++I+D Y+ + + M K + P + +
Sbjct: 240 ALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN--VVTYNS 296
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ L + G+ A + + KI T ++ A KEG++ EA ++Y + +R
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + ++ + P + + + C + E
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ ++ ++L+ + R+ D A + ++ D+ TY +LLDGL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+G++E A+ +F+Y++ K+ ++ I++ +C ++ + G KP+
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 430 ATYKQVISGF 439
TY ++SGF
Sbjct: 537 VTYTTMMSGF 546
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 191/435 (43%), Gaps = 21/435 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+ +L+ + H D + + M G+ P N L+ L+R N A L M
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL--------DSGIYSSVMYNLVIDFYSKK 125
V G P+ T+ +V LC+ G ++ L LL + G+ V+YN +ID
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV---VIYNTIIDALCNY 269
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
+ A + EM N + + P TY+S++ Y + + R++ M+E+K+ P +
Sbjct: 270 KNVNDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN--V 326
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I GK AE ++ I+ T ++ R+ EA ++ L
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + Y + CK + +E L R++ +RG + + + + +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + ++ G+L D S L++ C+N +++ A+ + +++ K D+ TY++
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCH--LKELRKAMKNHDEML 421
+++G+ K G++E+ +F + LK V + ++ ++S C LKE A+ EM
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADAL--FREMK 563
Query: 422 KMGHKPDEATYKQVI 436
+ G PD TY +I
Sbjct: 564 EEGPLPDSGTYNTLI 578
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 173/401 (43%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + N+ L L M G+S N +T+S++ CR + + L +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 105 LDSGI---YSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + Y V N +++ + A + +M P T+++++ G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE-MGYQPDSFTFNTLIHGLF 197
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R+ + + +V MV K P G V+ L G A + K+ KIE
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYG--IVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ AL V +A+ ++ + +GI Y + + LC + + LL
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D++ER P + S + + +GK E E+L ++ + + D F SSL+ +C +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D+A + + +V TY+ L+ G K R++E + +F M + +V ++ ++
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +E A +M+ G PD TY ++ G
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 173/397 (43%), Gaps = 21/397 (5%)
Query: 56 ALYRQNEIRL--ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI 109
++ R N+++L A L+G MV+ P+ +S + + + KF++V+ L + GI
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 110 YSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
++ Y+++I+ + ++ A L +M P T +S+L+G + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMK-LGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+VG MVE P F + +I L + A + R + + T G ++
Sbjct: 172 SLVGQMVEMGYQPDSFTF--NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K G + A+ + + + I Y ++ LC + L ++ +G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C G+W + LLS ++++ + + S+L++ + ++ +A L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR----- 403
++ K D+ TY L++G R++EA +F+ M +S F VV+
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-----ISKDCFPNVVTYNTLIK 404
Query: 404 -LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C K + + M+ EM + G + TY +I GF
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 191/435 (43%), Gaps = 8/435 (1%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S L+++ Y + LE+ M VP+ + A+++ L ++ LA
Sbjct: 398 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 457
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDF 121
+ L M G+ PN +S++ G+ E LLD SG+ + YN +I
Sbjct: 458 NKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 517
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
SK G A L E+ GR L P T+ + + G + K + + M++ L+P
Sbjct: 518 LSKAGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 576
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ L +I G A IF+R + TC + L K GRV+EA++
Sbjct: 577 NNPLY--TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 634
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + E+G+ Y + ++ CK+ + E+ L ++ +G P + V C
Sbjct: 635 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 694
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + +L + +KGL DS S++++ YC + + +A +L ++
Sbjct: 695 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L+ G K+G ME+A+ +F M + ++ SF ++ C ++++A + EM+
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 814
Query: 422 KMGHKPDEATYKQVI 436
PD TY VI
Sbjct: 815 AKQIMPDHVTYTTVI 829
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 189/412 (45%), Gaps = 44/412 (10%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+ G P +AC+AL+D R+ +I + MV G+ N T++++ LC
Sbjct: 320 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 379
Query: 94 RSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ GK E ++ G++ G +S + L+I+ Y ++ + G A + L+EM RNL P
Sbjct: 380 KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKRNLVPSA 438
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
+Y ++++G + ++++++ M L P + V+ +
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP-------NVVVYSI------------- 478
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
++ A + EGR++EA ++ +S G+ Y A ++ L K
Sbjct: 479 -----------------LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 521
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ EE L ++ RG P A+ F+ GK E + +LD GL+ ++
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 581
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ + + +A+++ ++ L DV T + GL K+GR++EA+++F +KE
Sbjct: 582 TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V ++ ++S C E+ KA + HDEM G P+ Y ++ G
Sbjct: 642 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 189/439 (43%), Gaps = 11/439 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G +A S ++D + +G + L + +M G + N L+ L + ++ A
Sbjct: 328 GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKA 387
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDF 121
+ + MV G PN T+ L+ + CR L LLD + + S+V Y +I+
Sbjct: 388 AEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMING 447
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
D A ++L E L P YS ++ + E + R++ M + P
Sbjct: 448 LCHCKDLSLA-NKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAP 506
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
F + +I LS GK A ++ T G + SK G++ EA +
Sbjct: 507 DIFCY--NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + + G+ + Y +N K E + R + G +P S F+
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDV 360
G+ +E ++ S + +KGL+ D F SSL+ +C +++KA LH ++ LKG + ++
Sbjct: 625 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM-CLKGIAPNI 683
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
Y+ L+DGL K G ++ A ++FD M E + S ++ ++ C + + +A E
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743
Query: 420 MLKMGHKPDEATYKQVISG 438
M G +P Y ++ G
Sbjct: 744 MPSKGVQPHSFVYNALVHG 762
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 176/424 (41%), Gaps = 44/424 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ + G M+ L ++R + G +P V C+A + L + ++ A ++ +
Sbjct: 582 TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
G+ P+ FT+S + C+ G+ E L D GI ++ +YN ++D K GD
Sbjct: 642 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 701
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD + E + L P TYS+++DG + E + + M K + P F+
Sbjct: 702 ARKLFDGMPE----KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 757
Query: 188 N--------------------------------DYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ +I K A +F+ ++
Sbjct: 758 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I T ++ K G+++EA ++ + ER + V Y + + K Q EV
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L +V +G P + + + C + E +L V+ KG+L L+
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + +A L ++ +L +A + L+ + G+M+EA R+F+ +K L +V +
Sbjct: 938 CKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 997
Query: 396 SFVI 399
+ +I
Sbjct: 998 TTLI 1001
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 161/372 (43%), Gaps = 15/372 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++ + +G E++ M + G P + NAL+D L + +I+ A L+ M
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
G+ P+ T+S + C+S F + + G+ S +YN ++ K+GD
Sbjct: 712 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771
Query: 131 AFDRLNEMCNGRNLTPGFST---YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + EM L GF+T +++++DG + K + + ++ M+ K+++P H
Sbjct: 772 AMNLFREM-----LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
VI GK A ++FK + + + T ++ +K G+ E ++ +
Sbjct: 827 T--VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+G+ + Y + CKE E L +VV +G + + + C +
Sbjct: 885 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 944
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +LL + + GL C++L+ + ++D+A + ++ L D T L+
Sbjct: 945 EASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 1004
Query: 368 DGLFKDGRMEEA 379
+G D E+A
Sbjct: 1005 NGNLNDTDSEDA 1016
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 177/427 (41%), Gaps = 10/427 (2%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
SC G + ++ C S G + ++ G P A + + ++
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMY-NLV 118
A+ + M+ G+ PN ++++ ++G L + G+ V +
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I K G A +E+ + L P TYSS++ G + + E + + M K
Sbjct: 620 IHGLLKNGRVQEALKVFSEL-KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P F+ + ++ L G A +F ++ +E T M+ K V E
Sbjct: 679 IAPNIFIY--NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 736
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++H + +G+ Y A V+ CKE E+ L R+++++G+ + + +
Sbjct: 737 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLID 795
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C K +E +L ++ K ++ D +++++++C ++++A L ++++ +
Sbjct: 796 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 855
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D TY L+ G K G+ E +F+ M V ++ +V+ C L +A K
Sbjct: 856 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 915
Query: 418 DEMLKMG 424
DE++ G
Sbjct: 916 DEVVGKG 922
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 180/426 (42%), Gaps = 54/426 (12%)
Query: 35 YRMMRVYGFVPAVSACNA-LLDALYRQNEI----RLASCLYGAMVRDGVSPNKFTWSLVA 89
++ + V +P S N ++ A+ QN++ RL Y + + GV ++S++A
Sbjct: 56 WKTIMVSSHIP--SKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILA 113
Query: 90 QILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC S F + G+L I SS++ +++ F + G FD L
Sbjct: 114 VQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDIL--------- 164
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI-------QKLSD 197
+D +R +G++ E + F++ ND ++ L D
Sbjct: 165 ----------IDSYKR----------MGMLDEAANV--FFVAKNDSILISLIRCNSLLKD 202
Query: 198 MGKTYAAEMIFK---RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ K E+ +K D K+ T ++ AL K G ++ A ++ + E+G+
Sbjct: 203 LLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN 262
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ Y + +C+ +E L R + E+G +P + A C + E +
Sbjct: 263 EFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFE 322
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ GL D CS+L++ + ID+ + + + +++ TY+VL+ GL K G
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFG 382
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+ME+A I M L +S +F +++ C + +A++ DEM K P +Y
Sbjct: 383 KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYG 442
Query: 434 QVISGF 439
+I+G
Sbjct: 443 AMINGL 448
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 182/441 (41%), Gaps = 21/441 (4%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S +++D Y G+ + V+ + + + ++ CN+LL L + + L +
Sbjct: 156 SSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKV 215
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSK 124
Y M+ + + +T++ + LC++G V++ + + G+ + +Y+LVI+ +
Sbjct: 216 YNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ 275
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
GD A + L + L P TY+ I G R ++ + M + L P +
Sbjct: 276 VGDIDEAVE-LKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY- 333
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I G I I + T ++ L K G++++A +I
Sbjct: 334 -NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G + + C+EH LL ++ +R +P A+ + C
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+LL + GL + S L+ Y S +I++A L + + D+ Y+
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELK-------VVSSSSFVIVVSRLCHLKELRKAMKNH 417
++ L K G+MEEA Y+ E++ V+ +F++ S+ + E A K
Sbjct: 513 AIISCLSKAGKMEEAST---YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE---AAKYF 566
Query: 418 DEMLKMGHKPDEATYKQVISG 438
DEML G P+ Y +I+G
Sbjct: 567 DEMLDHGLMPNNPLYTVLING 587
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
WK + + +LD + D + + L+ C + A + I++++ + + Y +
Sbjct: 213 WK----VYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSL 268
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+++G+ + G ++EAV + M E +V ++ ++ I+ + LC K + +A +EM K G
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328
Query: 425 HKPDEATYKQVISGFM 440
KPD +I GFM
Sbjct: 329 LKPDYNACSALIDGFM 344
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 190/413 (46%), Gaps = 21/413 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A L++ L R+ + A L MV DG+ PN+ T+ + +C+ G L L
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234
Query: 105 LD-----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L S I +V +Y+ +ID K G A + +EM + ++P TY+ +++G
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM-QEKGISPNLFTYNCMINGF 293
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ + R++ M E+K+ P + +I L GK + AE ++ I
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPD--VVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T M+ SK+ R+ A ++++L++ +G + + ++ C + ++ LL
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ RG + + + + C G +LL ++ G+ + C++L++ C+N
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471
Query: 339 RQIDKAIALHIKIEKLKGSL-----------DVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++ A+ + ++K K L DV TY++L+ GL +G+ EA +++ M
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V + ++ V+ LC L +A + D M G PD T+ +I+G+
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGY 584
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 188/448 (41%), Gaps = 74/448 (16%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+M V P V +A++D L++ A L+ M G+SPN FT++ + C S
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSS 296
Query: 96 GKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G++ LL V ++++I+ K+G F A + NEM R + P T
Sbjct: 297 GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLP-RGIIPNTIT 355
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPK------------------------HFLS 186
Y+S++DG + + + ++R+ LM K P H +S
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415
Query: 187 GNDYV---------IQKLSDMGKTYAA-----EMIFKRACDEKIELQDDTCGCMLKALSK 232
V I +G AA EMI C + TC +L L
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVV-----TCNTLLDGLCN 470
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G++K+A++++ ++ + + + S + V + + +CGL+ +
Sbjct: 471 NGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNIL-ICGLINE------------ 517
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
GK+ E EEL + +GL+ D+ +S+++ C ++D+A + +
Sbjct: 518 -----------GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
S DV T+ L++G K GR+ + + +F M +V+++ ++ ++ C + +
Sbjct: 567 SKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNIN 626
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
A+ EM+ G PD T + +++G
Sbjct: 627 GALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 183/417 (43%), Gaps = 14/417 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++++ M +P V LL + R + L+ M + N ++++++
Sbjct: 59 DAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILI 118
Query: 90 QILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ C K L G + S V ++ ++ + A +++C
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK---- 174
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P ++++++G R + + ++ MVE L P G ++ + MG T +A
Sbjct: 175 -PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT--IVDGMCKMGDTVSA 231
Query: 205 EMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+ ++ + +I+ ++ L K+GR +A ++ + E+GI+ Y +N
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C + E LLR++ ER P + S + + +GK+ E EEL + +L +G++
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++ +S+++ + ++D A + + S DV T+ +L+DG R+++ +++
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M +V+++ ++ ++ C L L A+ EM+ G P+ T ++ G
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 147/346 (42%), Gaps = 15/346 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S++++ +G F + E+Y M G +P N+++D +QN + A ++ M
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLM 379
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDF 128
G SP+ T+S++ C + + + + LL + +++ Y +I + + G+
Sbjct: 380 ATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNL 439
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AA D L EM + + P T +++LDG K + + + +M + K+ N
Sbjct: 440 NAALDLLQEMISS-GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 189 DY---------VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
D +I L + GK AE +++ + T ++ L K+ R+ EA
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
Q++ + +G + + +N CK + + + ++ RG + A+ +
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
C G ++ ++ G+ D+ +++ S ++ +A+
Sbjct: 619 FCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 196/416 (47%), Gaps = 15/416 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + + MM+ G VP + CN +L + N + +A LY M R +S +T++++
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 234
Query: 90 QILCRSGKFEVV---LGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + +G ++ G +V+ YN +I YS +G+ A L+ M + +
Sbjct: 235 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM-RVKGI 293
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKT 201
P TY S++ G + + E + + MVE L+P + Y + + +
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y EM+ K I T ++ AL EGR+ EA + + ++GI Y
Sbjct: 354 YRDEMVKK-----GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N + ++ L +++ +G P + + + + + KE ++L +LD+G+
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
D +++++ +C+N +++A L ++++ D T++ L+ G ++G++EEA
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ D MK + S+ ++S +++ A + DEML +G P TY +I
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 157/383 (40%), Gaps = 52/383 (13%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
FM+GL GF P V + N ++ + I A + AM G+ P+ +T+
Sbjct: 252 FMEGL---------GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302
Query: 88 VAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ +C+ G+ E GL D + ++V YN +ID Y KGD AF +EM +
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK-K 361
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P STY+ ++ + +D ++ M +K ++P + +I S G
Sbjct: 362 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY--NILINGYSRCGNAK 419
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + IE T ++ LS+ R+KEA ++ I ++G++ + A V
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ C E LL+++ + P + + + +C +GK +E LL + +G+
Sbjct: 480 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 539
Query: 323 LDSFCCSSLMEYY-----------------------------------CSNRQIDKAIAL 347
D ++L+ Y C N++ D A L
Sbjct: 540 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 599
Query: 348 HIKIEKLKGSLDVATYDVLLDGL 370
++ S D +TY L++G+
Sbjct: 600 LKEMVNKGISPDDSTYLSLIEGM 622
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
MI+ + DA++ ++++ YS G +++ M G P +L+ L
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448
Query: 59 RQNEIRLASCLYGAMVRDGVS-----------------------------------PNKF 83
R+N ++ A L+ ++ GVS P++
Sbjct: 449 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 508
Query: 84 TWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + Q CR GK E LLD GI + YN +I Y ++GD AF +EM
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ P TY++++ + ++ ++++ ++ MV K + P
Sbjct: 569 LS-IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 610
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 196/416 (47%), Gaps = 15/416 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + + MM+ G VP + CN +L + N + +A LY M R +S +T++++
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 256
Query: 90 QILCRSGKFEVV---LGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + +G ++ G +V+ YN +I YS +G+ A L+ M + +
Sbjct: 257 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM-RVKGI 315
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKT 201
P TY S++ G + + E + + MVE L+P + Y + + +
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y EM+ K I T ++ AL EGR+ EA + + ++GI Y
Sbjct: 376 YRDEMVKK-----GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N + ++ L +++ +G P + + + + + KE ++L +LD+G+
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
D +++++ +C+N +++A L ++++ D T++ L+ G ++G++EEA
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ D MK + S+ ++S +++ A + DEML +G P TY +I
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 157/383 (40%), Gaps = 52/383 (13%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
FM+GL GF P V + N ++ + I A + AM G+ P+ +T+
Sbjct: 274 FMEGL---------GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324
Query: 88 VAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ +C+ G+ E GL D + ++V YN +ID Y KGD AF +EM +
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK-K 383
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P STY+ ++ + +D ++ M +K ++P + +I S G
Sbjct: 384 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY--NILINGYSRCGNAK 441
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + IE T ++ LS+ R+KEA ++ I ++G++ + A V
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ C E LL+++ + P + + + +C +GK +E LL + +G+
Sbjct: 502 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 561
Query: 323 LDSFCCSSLMEYY-----------------------------------CSNRQIDKAIAL 347
D ++L+ Y C N++ D A L
Sbjct: 562 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 621
Query: 348 HIKIEKLKGSLDVATYDVLLDGL 370
++ S D +TY L++G+
Sbjct: 622 LKEMVNKGISPDDSTYLSLIEGM 644
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
MI+ + DA++ ++++ YS G +++ M G P +L+ L
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470
Query: 59 RQNEIRLASCLYGAMVRDGVS-----------------------------------PNKF 83
R+N ++ A L+ ++ GVS P++
Sbjct: 471 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 530
Query: 84 TWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + Q CR GK E LLD GI + YN +I Y ++GD AF +EM
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ P TY++++ + ++ ++++ ++ MV K + P
Sbjct: 591 LS-IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 632
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 193/405 (47%), Gaps = 11/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P++ A NA+L AL + A L +M+RDGV+PN +T++++ + LC G+ E
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 102 LGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
LG++ + + V YN ++ + + G+ AA +RL + + P T+++++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAA-ERLVGVMREGGVRPSLVTFNTVV 232
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + E + ++ M + L P + ++ G + A +F +
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGV--SYNTLVSGYCKAGCLHEALAVFAEMAQKG 290
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T ++ A+ + G ++ A+ + + ERG+ + + + A ++ C+ ++
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++++ E P + + + C G+ E EL+ + KG+ D S+++ Y
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C D A L+ K+ K D TY L+ GL ++ R+ +A +F+ M +L +
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C ++KA+ HDEM+K G PD TY +I G
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P V N L+ A R E+ A L G M GV P+ T++ V LC++G+
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240
Query: 98 FEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E + D G+ V YN ++ Y K G A EM + + P T++
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ-KGVVPDVVTFT 299
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++ R E + +VG M E+ L F +I G A + K
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF--TALIDGFCRNGFLDDALLAMKEMR 357
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ +I+ ++ K GR+ EA ++ H + +G+ Y ++ CK +
Sbjct: 358 ECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTD 417
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L R ++++G +P A+ S + C + + + EL +L GL D F ++L+
Sbjct: 418 SAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIF 383
+ +C + KA++LH ++ K KG L DV TY VL+DGL K R +EA R+
Sbjct: 478 DGHCKEGNVQKALSLHDEMIK-KGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 177/394 (44%), Gaps = 23/394 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + ++ Y G + L V+ M G VP V +L+ A+ R +
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSVM-YNLVID 120
A L G M G+ N+FT++ + CR+G + L + + I SV+ YN++I+
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLIN 373
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G A + ++EM + + P TYS+IL G + T+ + + M++K ++
Sbjct: 374 GYCKLGRMDEARELIHEM-EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I+ L + + A +F++ ++ + T ++ KEG V++A+
Sbjct: 433 PDAITYSS--LIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKAL 490
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP----------C- 289
++ + ++G+ Y ++ L K + +E LL + +P C
Sbjct: 491 SLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC 550
Query: 290 -AMELSRFVASQCG---KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
E VA G KG + +++ ++LD+ LD S L+ +C I KA+
Sbjct: 551 RTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKAL 610
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ H ++ + S + + L+ GLF++G EA
Sbjct: 611 SFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEA 644
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 128/319 (40%), Gaps = 36/319 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ Y G + E+ M G P V + +L + + A L M++
Sbjct: 369 NVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK 428
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
GV P+ T+S + + LC + E+ +L G+ Y +ID + K+G+
Sbjct: 429 KGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +EM + + P TYS ++DG + +T+ + R++ + + +P +
Sbjct: 489 ALSLHDEMIK-KGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNI------ 541
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
Y A M R + K + +LK S +G + +A ++Y + +R
Sbjct: 542 ----------KYEALMHCCRTAEFK------SVVALLKGFSMKGLMNQADKVYQSMLDRH 585
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ S Y ++ C+ + + ++ G+ P + V +G E +
Sbjct: 586 WKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEAD 645
Query: 311 ELLSAVLDKGLLLDSFCCS 329
++ +L+ CCS
Sbjct: 646 NVIQELLN--------CCS 656
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V+G P VS N L+ AL R +++R A + M G+ P++ T++ V Q G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ L + + + +S+V N+++ + K+G A + + EM N P T++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + + + I+ +M+++ P +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY---------------------------- 331
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
T ++ L K G VKEA+++ + R + Y ++ LCKE+Q E
Sbjct: 332 ---------TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L R + +G +P + + C + EL + KG D F + L+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ CS ++D+A+ + ++E + V TY+ L+DG K + EA IFD M+ V
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S ++ ++ LC + + A + D+M+ G KPD+ TY +++ F
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 185/436 (42%), Gaps = 12/436 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLE-VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
++++++ + +G D L + M GF P N L++ L + ++ A +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGD 127
M+++G P+ +T++ V LC+ G+ + + +LD I ++V YN +I K+
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L + + + P T++S++ G V+ + M K P F
Sbjct: 381 VEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY- 438
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I L GK A + K+ T ++ K + +EA +I+ +
Sbjct: 439 -NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G++ Y ++ LCK + E+ L+ ++ G P + + C G K
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ +++ A+ G D +L+ C +++ A L I+ +L Y+ ++
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCH-LKELRKAMKNHDEMLKMG 424
GLF+ + EA+ +F M E S+ IV LC+ +R+A+ E+L+ G
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Query: 425 HKPDEATYKQVISGFM 440
P+ ++ + G +
Sbjct: 678 FVPEFSSLYMLAEGLL 693
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 146/368 (39%), Gaps = 63/368 (17%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI-- 63
EG D + V+ G + +EV M P N L+ L ++N++
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 64 ---------------------------------RLASCLYGAMVRDGVSPNKFTWSLVAQ 90
R+A L+ M G P++FT++++
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 91 ILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC GK + L +L SG SV+ YN +ID + K A + +EM ++
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVS 502
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---------KHFLSGNDYVIQKLS 196
TY++++DG + + E + +++ M+ + P HF G D I+K +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD--IKKAA 560
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
D+ + + C+ I T G ++ L K GRV+ A ++ I +GI +
Sbjct: 561 DI-----VQAMTSNGCEPDIV----TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC--GKGKWKEVEELLS 314
Y + L ++ + E L R+++E+ P R V G G +E + L
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 315 AVLDKGLL 322
+L+KG +
Sbjct: 672 ELLEKGFV 679
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 16/280 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D KG + L + + M + G +V N L+D + N+ R A ++ M
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
GVS N T++ + LC+S + E L+D I YN ++ + + GD
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSGN 188
A D + M + P TY +++ G + + EV+ +++ + K L P +
Sbjct: 559 AADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY---- 613
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG--CMLKAL-SKEGRVKEAIQIYHL 245
+ VIQ L KT A +F+ ++ E D + + L + G ++EA+
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQN-EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ E+G S Y L E + L+ V+++
Sbjct: 673 LLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 188/417 (45%), Gaps = 14/417 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +E + +M+ GF P CN +L L R N I A Y M R + N +T++++
Sbjct: 174 EAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 233
Query: 90 QILCRSGKFEVV---LGLLDS-GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + LG+++S GI + V YN ++ YS +G A ++EM +
Sbjct: 234 NVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEM-KSKGF 292
Query: 145 TPGFSTYSSILDGA-RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY+ IL +EV + G+ L+P + +I+ S+ G
Sbjct: 293 QPDLQTYNPILSWMCNEGRASEVLREMKGI----GLVPDSV--SYNILIRGCSNNGDLET 346
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A + + T ++ L E +++ A + I E+GI + Y +N
Sbjct: 347 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVIN 406
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C+ ++ L +++ G P + + C + K +E +EL V+ KG+
Sbjct: 407 GYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKP 466
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D ++LM+ +C+ +D+A +L +++++ D TY+ L+ GL +G+ EEA +
Sbjct: 467 DLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELM 526
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK + S+ ++S + + A DEML +G P TY ++ G
Sbjct: 527 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGL 583
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 32/313 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EV R M+ G VP + N L+ ++ A MV+ G+ P +T++ + L
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373
Query: 93 CRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
K E L+ + GI SV YN+VI+ Y + GD AF +EM + P
Sbjct: 374 FMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTD-GIKPT 432
Query: 148 FSTYSSILDGARRYEKT----EVSDRIVG------LMVEKKLLPKHFLSGN-DYVIQKLS 196
TY+S++ R KT E+ +++VG L++ L+ H +GN D L
Sbjct: 433 QFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLK 492
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+M + I+ D T C+++ L EG+ +EA ++ + RGI
Sbjct: 493 EMDRM-------------NIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 539
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ K+ + + +++ G+ P + + + + EELL +
Sbjct: 540 SYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREM 599
Query: 317 LDKGLLLD--SFC 327
+G++ + SFC
Sbjct: 600 KSEGIVPNDSSFC 612
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 27/259 (10%)
Query: 26 GLFMDG-LE----VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
GLFM+ +E + R +R G V N +++ + + + A L+ M+ DG+ P
Sbjct: 372 GLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKP 431
Query: 81 NKFTWSLVAQILCRSGK-------FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
+FT++ + +LCR K FE V+G G+ VM N ++D + G+ AF
Sbjct: 432 TQFTYTSLIYVLCRRNKTREADELFEKVVG---KGMKPDLVMMNTLMDGHCATGNMDRAF 488
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L EM + N+ P TY+ ++ G K E + ++G M + + P H + +I
Sbjct: 489 SLLKEM-DRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI--SYNTLI 545
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDD----TCGCMLKALSKEGRVKEAIQIYHLISE 248
S G T A ++ DE + L + T +LK LSK + A ++ +
Sbjct: 546 SGYSKKGDTKHAFIVR----DEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKS 601
Query: 249 RGITVRDSDYYAFVNVLCK 267
GI DS + + + + K
Sbjct: 602 EGIVPNDSSFCSVIEAMSK 620
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 201/414 (48%), Gaps = 12/414 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
GLE ++ Y + +V +CN LL AL ++NE +Y M+R +SPN T++ V
Sbjct: 179 GLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVIN 238
Query: 91 ILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDR---LNEMCNGR 142
LC+ GK ++D G + +V+ YN +ID Y K G G + L EM +
Sbjct: 239 GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK 298
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
++P T++ ++DG + E + ++ M + L P + + ++ L + GK
Sbjct: 299 -VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT--VVTYNSLVNGLCNEGKLN 355
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A+++ ++ T ++ K+ ++EA +++ I ++G+T + +
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ CK + EE L + ++E+G++P A + + C +GK +EV+ LL+ + +G+
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D+ + L+ +C ++ KA L ++ TY++LL+G +G + A+ +
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL 535
Query: 383 FDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
M KE + + ++ +++ C +L A +EML+ G P+ TY+ +
Sbjct: 536 RKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/422 (18%), Positives = 156/422 (36%), Gaps = 124/422 (29%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S ++++D + L+V+ M+ G P V N+L++ L + ++ A L
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFG 129
M+ + PN T YN +I+ Y KK
Sbjct: 361 LDEMLSSNLKPNVIT------------------------------YNALINGYCKKKLLE 390
Query: 130 AA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A FD + + + LTP T++++L G ++ K E + + +M+EK LP
Sbjct: 391 EARELFDNIGK----QGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP----- 441
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
T C++ +EG+++E + + +
Sbjct: 442 --------------------------------NASTYNCLIVGFCREGKMEEVKNLLNEM 469
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
RG+ Y ++ C++ +P++ L+ +++++G P
Sbjct: 470 QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP------------------ 511
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ L +LL+ +C + A+ L ++EK +V TY+VL
Sbjct: 512 --------SHLTYNILLNGYCMEG---------NLRAALNLRKQMEKEGRWANVVTYNVL 554
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+ G + G++E+A + + M E ++ + + ++ +EM++ G
Sbjct: 555 IQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK---------------EEMMEKGFL 599
Query: 427 PD 428
PD
Sbjct: 600 PD 601
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 193/420 (45%), Gaps = 11/420 (2%)
Query: 25 KGLFMDGL--EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
G F +G + Y + G P V N ++D L + E+ A ++ MV GV PN
Sbjct: 201 NGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260
Query: 83 FTWSLVAQILCRSGKFEVVLG----LLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNE 137
T++ + LC++ + ++ G ++D G+ S+V YN +ID K A +
Sbjct: 261 VTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M + R + P TY++I+DG + + + ++ + M++K + P + +I L
Sbjct: 321 MID-RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTY--TIIIDGLCK 377
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
AE +F++ D+ ++ + T C++ G+ +E +Q +S +
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ LCK + E L ++ +G P + KG E+ +LL+ ++
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G+ + ++++ Y ID+ + + IK+++ S +V TY L+D L K GR++
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+AV F+ M V ++ F +V LC + + K + EML G +PD + V+
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 192/446 (43%), Gaps = 40/446 (8%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V++ M G P N ++D L + E+ +A ++ MV GV P+ T++ + L
Sbjct: 246 DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305
Query: 93 CRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++ + G ++D G+ V YN +ID K A +M + + + P
Sbjct: 306 CKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID-KGVKPD 364
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH---------FLSGNDY--VIQKLS 196
TY+ I+DG + + + ++ + M++K + P + +LS + V+Q++
Sbjct: 365 NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIK 424
Query: 197 DM----------------------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+M GK A +F + I+ G ML K+G
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKG 484
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+ E + +L+ GI+ + + K +EV + + ++G P +
Sbjct: 485 ALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYG 544
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ + C G+ + + ++++G+ ++ +SL+ C+ + +K L +++
Sbjct: 545 TLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ 604
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA 413
D+ ++ +L L K+GR+ EA R+ D M + + S+ ++ C + +A
Sbjct: 605 GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEA 664
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+K D M+ G KP+ +Y ++ G+
Sbjct: 665 VKLLDGMVSAGLKPNIVSYNTLLHGY 690
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 175/411 (42%), Gaps = 11/411 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG----VSPNKFTWSLVAQI 91
R M G V + N LL L + A L MV DG SP+ ++++V
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV-DGQDSSCSPDVVSYNIVING 202
Query: 92 LCRSGKFEVVLGL-LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G+ + L L+ G+ V+ YN +ID K + A D +M + + P
Sbjct: 203 FFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE-KGVKPNNV 261
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY++I+DG + ++ ++++ + MV+K + P + + +I L AE +F+
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTY--NTIIDGLCKAQAVDRAEGVFQ 319
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ D ++ T ++ L K + +A ++ + ++G+ + Y ++ LCK
Sbjct: 320 QMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQ 379
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ G+ + ++++G P + + G+W+EV + + + L D F
Sbjct: 380 SVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYG 439
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L++Y C N + ++A +L + + V Y ++L G K G + E + + M
Sbjct: 440 LLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499
Query: 390 KVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + F V+ + + M +M + G P+ TY +I
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 175/423 (41%), Gaps = 42/423 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G + + ++ + M + P V LLD L + + A L+ +M+R G+ P
Sbjct: 410 YLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP- 468
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM-CN 140
S +Y +++ Y KKG D LN M N
Sbjct: 469 -----------------------------SVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK---LLPKHFLSGNDYVIQKLSD 197
G ++P +++++ Y K + D ++ + ++ K L P G +I L
Sbjct: 500 G--ISPNHRIFNTVICA---YAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT--LIDALCK 552
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+G+ A + F + +E + + ++ L + ++ +++ + +GI
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ + LCKE + E L+ +V G P + + + C + E +LL ++
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
GL + ++L+ YC +ID A L ++ + + V TY+ +L+GLF+ GR
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732
Query: 378 EAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA ++ + +K K+ S ++ I++ C +A K + M + D T+ +I
Sbjct: 733 EARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792
Query: 437 SGF 439
G
Sbjct: 793 DGL 795
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/440 (19%), Positives = 180/440 (40%), Gaps = 83/440 (18%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYGAMVRD---GVSPNKF 83
D L+++ + ++ +V A N LL + R + +LA + M+RD V+P+
Sbjct: 26 DALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCC 85
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
T+S+V CR G+ E+
Sbjct: 86 TYSIVIGCFCRIGRLEL------------------------------------------- 102
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG---K 200
GF+ + IL R + V+ + GL K++ + +++++ ++G
Sbjct: 103 ---GFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV-----LLRQMPEVGCRLG 154
Query: 201 TYAAEMIFKRACDEK------------IELQDDTC-------GCMLKALSKEGRVKEAIQ 241
+ + K CD + ++ QD +C ++ EG+V +A
Sbjct: 155 VVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKA-- 212
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
Y L E G++ Y ++ LCK + + + + +VE+G P + + + C
Sbjct: 213 -YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLC 271
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ E + ++DKG+ + +++++ C + +D+A + ++ D
Sbjct: 272 KAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHV 331
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY+ ++DGL K +++A +F M + V + ++ I++ LC + + +A +M
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391
Query: 421 LKMGHKPDEATYKQVISGFM 440
+ G KP+ TY +I G++
Sbjct: 392 IDKGVKPNNGTYNCLIHGYL 411
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 169/401 (42%), Gaps = 12/401 (2%)
Query: 2 IQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
I+ D + D + L+LD G + ++ M G P+V+ +L +
Sbjct: 423 IKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGK 482
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM- 114
+ + L MV +G+SPN ++ V + + V+ + G+ +V+
Sbjct: 483 KGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVT 542
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +ID K G A + N+M N +TP ++S++ G +K E + + M
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMIN-EGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ + + P + V+ L G+ A + ++ + ++
Sbjct: 602 LNQGIRPDIVFF--NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ EA+++ + G+ Y ++ CK + + L R+++ +G P +
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL-MEYYCSNRQIDKAIALHIKIEK 353
+ G++ E EL ++ K L S C S+ ++ +C N D+A + +
Sbjct: 720 TILNGLFRSGRFSEARELYVNMI-KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
+ LD+ T+++++DGLFK GR E+A+ +F + +V S
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 43/232 (18%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
G P + + N LL + I A CL+ M+R GV+P T++ + L RSG+F
Sbjct: 675 GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA 734
Query: 99 -EVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN---------------- 140
E+ + ++ S ++S Y++++D + K F AF +C+
Sbjct: 735 RELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDG 794
Query: 141 ----GR--------------NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
GR L P TY I + E D + +M + P
Sbjct: 795 LFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854
Query: 183 -HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
H L+ +I+KL D G+ A + ++ L+ T ++ S+E
Sbjct: 855 SHMLNA---LIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V+G P VS N L+ AL R +++R A + M G+ P++ T++ + Q G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGD 239
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ L + + + +S+V N+++ + K+G A + + EM N P T++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + + + I+ +M+++ P +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY---------------------------- 331
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
T ++ L K G VKEA++ + R + Y ++ LCKE+Q E
Sbjct: 332 ---------TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L R + +G +P + + C + EL + KG D F + L+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ CS ++D+A+ + ++E + V TY+ L+DG K ++ EA IFD M+ V
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S ++ ++ LC + + A + D+M+ G KPD+ TY +++ F
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHF 550
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 186/436 (42%), Gaps = 12/436 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLE-VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
++++++ + +G D L + M GF P N L++ L + ++ A +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGD 127
M+++G P+ +T++ V LC+ G+ + + LD I ++V YN +I K+
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L + + + P T++S++ G V+ + M K P F
Sbjct: 381 VEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY- 438
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I L GK A + K+ T ++ K +++EA +I+ +
Sbjct: 439 -NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G++ Y ++ LCK + E+ L+ ++ G P + + C G K
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIK 557
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ +++ A+ G D +L+ C +++ A L I+ +L Y+ ++
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVI 617
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCH-LKELRKAMKNHDEMLKMG 424
GLF+ + EA+ +F M E + S+ IV LC+ +R+A+ E+L+ G
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Query: 425 HKPDEATYKQVISGFM 440
P+ ++ + G +
Sbjct: 678 FVPEFSSLYMLAEGLL 693
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 146/368 (39%), Gaps = 63/368 (17%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI-- 63
EG D + V+ G + +E M P N L+ L ++N++
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 64 ---------------------------------RLASCLYGAMVRDGVSPNKFTWSLVAQ 90
R+A L+ M G P++FT++++
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 91 ILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC GK + L +L SG SV+ YN +ID + K A + +EM ++
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM-EVHGVS 502
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---------KHFLSGNDYVIQKLS 196
TY++++DG + + E + +++ M+ + P HF G D I+K +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGD--IKKAA 560
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
D+ + + C+ I T G ++ L K GRV+ A ++ I +GI +
Sbjct: 561 DI-----VQAMTSNGCEPDIV----TYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPH 611
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERG-YIPCAMELSRFVASQC-GKGKWKEVEELLS 314
Y + L ++ + E L R+++E+ P A+ C G G +E + L
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 315 AVLDKGLL 322
+L+KG +
Sbjct: 672 ELLEKGFV 679
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 14/279 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D KG + L + + M + G +V N L+D + N+IR A ++ M
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
GVS N T++ + LC+S + E L+D I YN ++ + + GD
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSGN 188
A D + M + P TY +++ G + + EV+ +++ + K L P +
Sbjct: 559 AADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY---- 613
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKAL-SKEGRVKEAIQIYHLI 246
+ VIQ L KT A +F+ ++ D + + L + G ++EA+ +
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
E+G S Y L E + L+ V+++
Sbjct: 674 LEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 205/452 (45%), Gaps = 45/452 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G E++ M G +S N LL L ++ +++ L +++ GV PN FT++
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
Q LC+ G+ + +V L+D G V+ YN +I K F A L ++ N L
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVN-EGL 317
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY++++ G + ++++RI+ V +P F + +I L G+T A
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRS--LIDGLCHEGETNRA 375
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+F A + I+ ++K LS +G + EA Q+ +SE+G+ + VN
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNG 435
Query: 265 LCKEHQPEEVCGLLRDVVERGYIP-------------------CAMEL------------ 293
LCK + GL++ ++ +GY P A+E+
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPD 495
Query: 294 ----SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + C K+++V E +++KG + F + L+E C ++DKA+ L
Sbjct: 496 VYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLE 555
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHL 407
+++ + D T+ L+DG K+G ++ A +F M+E+ +VS S ++ I++
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEK 615
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A K EM+ PD TY+ ++ GF
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 188/494 (38%), Gaps = 79/494 (15%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + + V+ M Y P V + NA++ L A +Y M G++P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS------------------GIYSS----------- 112
+++++ + CR+ + L LL++ G Y
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205
Query: 113 -----------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+N ++ KKGD L+++ R + P TY+ + G +
Sbjct: 206 KMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIK-RGVLPNLFTYNFFIQGLCQK 264
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ + + R+VG ++++ PK + +Y+I L K AE+ + +E +E
Sbjct: 265 GELDAAVRMVGRLIDQG--PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ K G V+ A +I G + Y + ++ LC E + L +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 282 V-----------------------------------ERGYIPCAMELSRFVASQCGKGKW 306
+ E+G IP + V C G
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ + L+ ++ KG D F + L+ Y + +++ A+ + + DV TY+ L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSL 502
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L+GL K + E+ + + M E + +F I++ LC +L KA+ +EM
Sbjct: 503 LNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562
Query: 426 KPDEATYKQVISGF 439
PD T+ +I GF
Sbjct: 563 NPDAVTFGTLIDGF 576
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 42/284 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ YS + + LE+ +M G P V N+LL+ L + ++ Y M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
V G +PN FT++++ + LCR K + LGLL+ S +V + +ID + K GD
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +M ++ TY+ I+ +++++ MV++ L P
Sbjct: 583 DGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD------ 636
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
G TY M+ K G V + + E
Sbjct: 637 ----------GYTYRL---------------------MVDGFCKTGNVDLGYKFLLEMME 665
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G + +N LC E + E G++ +V++G +P A+
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 141/350 (40%), Gaps = 47/350 (13%)
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + N M STY SI++ Y K E + + L+ ++ + H L G Y
Sbjct: 23 ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEV--LVDMRQNVGNHMLEG-VY 79
Query: 191 V--IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V ++ GK A +F+R E + ++ L G +A ++Y + +
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRD 139
Query: 249 RGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRD------------------------- 280
RGIT D Y+F + C+ +P LL +
Sbjct: 140 RGIT---PDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 281 ----------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ G C ++ + C KG KE E+LL V+ +G+L + F +
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-VRIFDYMKEL 389
++ C ++D A+ + ++ DV TY+ L+ GL K+ + +EA V + + E
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ +++ C ++ A + + G PDE TY+ +I G
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 158/367 (43%), Gaps = 25/367 (6%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S++GL ++ ++ M G +P V N L++ L + + A L M+ G P+
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 83 FTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNE 137
FT++++ K E L +LD +G+ V YN +++ K + +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE---KKLLPKHFLSGNDYVIQK 194
M + P T++ +L+ RY K D+ +GL+ E K + P G +I
Sbjct: 522 MVE-KGCAPNLFTFNILLESLCRYHKL---DKALGLLEEMKNKSVNPDAVTFGT--LIDG 575
Query: 195 LSDMGKTYAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
G A +F++ + + T ++ A +++ V A +++ + +R +
Sbjct: 576 FCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y V+ CK + L +++E G+IP L R + C + + E ++
Sbjct: 636 DGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KGSLDVATYDVLLDGLF 371
++ KGL+ ++ +++ ++ + A + +E L K + Y++L DGL
Sbjct: 696 HRMVQKGLVPEA--VNTIFDH-----DKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL- 747
Query: 372 KDGRMEE 378
+D R+ +
Sbjct: 748 RDKRLRK 754
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 209/436 (47%), Gaps = 9/436 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S L++ Y +G E +R+++ G +++ACN+LL L + + LA +
Sbjct: 25 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSK 124
Y +VR GV N +T +++ LC++ K E L + G++ V+ YN +I+ Y +
Sbjct: 85 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
+G AF+ ++ M +G+ L P TY++I++G + K + ++ M++ + P
Sbjct: 145 QGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT- 202
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + ++ + AE IF + + + ++ LSK G + +A++ +
Sbjct: 203 -ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ + Y + C+ E + +++E+G + + + + C +
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
E +EL + + ++G+ D + ++L+ Y + ++KA+ L + + DV TY+
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 381
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+DG K ME+ +++ M ++ + S+ I+++ C++ + +A + DEM++
Sbjct: 382 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 441
Query: 424 GHKPDEATYKQVISGF 439
G + T ++ G+
Sbjct: 442 GFEATIITCNTIVKGY 457
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 195/455 (42%), Gaps = 44/455 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +++ Y +GL + E+ M G P V NA+++ L + + A + M++
Sbjct: 136 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 195
Query: 76 DGVSPNKFTWSLVAQILCRSGK----------------------FEVVLGLL-------- 105
G+SP+ T++++ CR+ F ++GLL
Sbjct: 196 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 255
Query: 106 ---------DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
++G+ +V+Y ++I + + G A +EM + TY++IL
Sbjct: 256 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNTIL 314
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + +D + M E+ + P + +I S G A +F+
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTT--LINGYSKDGNMNKAVTLFEMMIQRN 372
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
++ T ++ K +++ ++++ + R I Y +N C E
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L ++VE+G+ + + V C G + +E LS +L KG++ D ++L+ +
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSS 394
+D+A AL K+E DV TY+V+L+G + GRM+EA I M E V
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
S++ +++ L++A + HDEML+ G PD+
Sbjct: 553 STYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 204/415 (49%), Gaps = 16/415 (3%)
Query: 35 YRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKFTW-SLVAQIL 92
+RM+ F V + ++D L R+ E+ A L MV G V PN FT+ +L+ +
Sbjct: 204 HRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV 263
Query: 93 CRSGKFEV--VLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R + V +L L++ ++S Y+++I +YS GD A +++ E +N+
Sbjct: 264 GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEA-EKIFEEMREKNIEMDV 322
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
YSS++ +RR + + + M ++ ++P G +I + G+ AAE++
Sbjct: 323 YVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGA--LIGGVCKAGQMEAAEILL 380
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ ++L + + G++ EA+++ ++ ++GI Y N LCK
Sbjct: 381 LEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKL 440
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
H+ +E +L +VE+G P + + F+ C +G E E L + KG + +
Sbjct: 441 HRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITY 500
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L++ YC ++ +A IK E + L D+ TY L+ G GR++EA+++F+ M
Sbjct: 501 NTLIDAYCKKEKVKQA--HKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEM 558
Query: 387 KELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LK ++ +++ ++S L +A K +DEM+K+G PD+ + ++ F
Sbjct: 559 R-LKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 180/417 (43%), Gaps = 32/417 (7%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S LF + + VY + G V +C LL AL R E+ + MV
Sbjct: 156 SDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVE------- 208
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
S KFE+ + L LVID ++G+ A + ++EM
Sbjct: 209 ------------SNKFEIRVQSL----------TLVIDVLCRRGEVEKAKELMDEMVGKG 246
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P TY+++L+ + + D I+ LM +++++ ++ +IQ S G
Sbjct: 247 IVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFS--VATYSILIQWYSSSGDIE 304
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
AE IF+ ++ IE+ M+ + G +K A ++ +S+R I Y A +
Sbjct: 305 EAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALI 364
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+CK Q E LL ++ +G + + + C +GK E L + + KG+
Sbjct: 365 GGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGIN 424
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D F + L C + D+A + + + +V T+ + ++ K+G + EA R+
Sbjct: 425 ADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERL 484
Query: 383 F-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
F D K+ +V + ++ ++ C +++++A K EM+ G PD TY +I G
Sbjct: 485 FRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 111/278 (39%), Gaps = 48/278 (17%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + +D Y +G + L + +M G V N L + L + +
Sbjct: 386 KGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDE 445
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A C+ +MV GV PN T+++ +I C+ G L + + + YN +ID
Sbjct: 446 AKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLID 505
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK-KL 179
Y KK A +EM N + L P TYSS++ G + IVG + E KL
Sbjct: 506 AYCKKEKVKQAHKIKSEMIN-KGLLPDLYTYSSLIHG----------ECIVGRVDEALKL 554
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
N+ ++ ++ TY + M+ LSKEGR EA
Sbjct: 555 F-------NEMRLKGITRNVATYTS---------------------MISGLSKEGRADEA 586
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
++Y + + G+ D + + V H+P GL
Sbjct: 587 FKLYDEMMKIGLIPDDRVFTSLVGSF---HKPLTHAGL 621
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 194/405 (47%), Gaps = 11/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P+V A NA+L AL + A +M+R GV+PN +T++++ + LC G+ E
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 102 LGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+G++ ++V YN ++ + + G+ A ++ M N P T++S+++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + E + ++ MV + L P + + ++ +G + + +F +
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPD--VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ A K G +++A+ + + ERG+ + + + A ++ CK+ ++
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++ + G P + + + C G+ EL+ + K + D S+++ YC
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409
Query: 337 SNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+D A L+ K+ K KG L D TY L+ GL ++ R+ +A +F+ M +L V
Sbjct: 410 KVGNLDSAFQLNQKMLK-KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + KA+ HDEM++ G PD TY +I+G
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 184/441 (41%), Gaps = 35/441 (7%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKF 83
+G + + V MR G P N L+ A R E+ A + M +G PN
Sbjct: 165 RGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV 224
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + LC++G+ E + D + V YN ++ Y K G + +EM
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD- 197
R L P T++S++ + E + +V M E+ L N+ L D
Sbjct: 285 TQ-RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL------RMNEVTFTALIDG 337
Query: 198 -MGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVR 254
K + + + K +Q ++ K GR+ A ++ + + +
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y ++ CK + L + ++++G +P A+ S + C + + + EL
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKD 373
+L G+ D F ++L++ +C ++KA++LH ++ + KG L DV TY VL++GL K
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVLINGLSKS 516
Query: 374 GRMEEAVRIF-------------DYMKELKVVSSSSFVIVVSRL---CHLKELRKAMKNH 417
R +EA R+ Y + S + F VV+ L C +++A K +
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576
Query: 418 DEMLKMGHKPDEATYKQVISG 438
ML K D + Y +I G
Sbjct: 577 QSMLDRNWKLDGSVYSILIHG 597
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 173/394 (43%), Gaps = 23/394 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + +L Y G + L V+ M G VP V +L+ A + +
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVID 120
A L M G+ N+ T++ + C+ G + L ++ GI SV+ YN +I+
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G A + + EM + + P TYS+I+ G + + + ++ M++K +L
Sbjct: 372 GYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I+ L + + A +F+ ++ + T ++ KEG V++A+
Sbjct: 431 PDAITYSS--LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-----------C 289
++ + +G+ Y +N L K + +E LL + +P C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548
Query: 290 A-MELSRFVA---SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ E VA C KG KE +++ ++LD+ LD S L+ +C + KA+
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 608
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ H ++ + S + + L+ GLF++G + EA
Sbjct: 609 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 156/401 (38%), Gaps = 82/401 (20%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++D + KG D L MR G P+V NAL++ + + LA L M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI------YSSVM--------- 114
V P+ T+S + C+ G F++ +L G+ YSS++
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 115 ---------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
Y +ID + K+G+ A +EM + + P TYS
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSV 508
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + +T+ + R++ + + +P + Y A M+ C
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNI----------------KYDALML----CC 548
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
K E + + +LK +G +KEA ++Y + +R + S Y ++ C+ +
Sbjct: 549 SKAEFK--SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 606
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ ++ G+ P + V +G E + + +L CC
Sbjct: 607 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT--------CCP---- 654
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ + KA+ I + + +G++D A DVL G+ +DG
Sbjct: 655 --LADAEASKAL---IDLNRKEGNVD-ALIDVLC-GMARDG 688
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 195/438 (44%), Gaps = 21/438 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S ++D G + V+ M G+VP V NAL++ L + +++ A + +M
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
V GV+P+ T+S++ C++ + E++ G+ G +V+ +N +ID K
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G AF ++M L P TY +++DG R + ++ ++ M P
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM------PDPDTYAF 535
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ I LS +G A ++ R + ++ T ++ K G ++A ++ +
Sbjct: 536 NCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + + A ++ LCK Q E +L + G P + + V C G+ +E
Sbjct: 596 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ L ++ G + DS SL+ C + D A+ L +++ D TY++L+D
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715
Query: 369 GLFKDGRMEEAVRIFDYM----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GL+K G+ E+A+ + + M VV ++ ++ LC +L +A + H +M
Sbjct: 716 GLWKSGQTEQAITVLEEMVGKGHHPDVV---TYNTLIDSLCKAGDLEEARRLHGDMSSRV 772
Query: 425 HK---PDEATYKQVISGF 439
+ P+ TY +I+G
Sbjct: 773 SRCCVPNVVTYSVLINGL 790
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 178/397 (44%), Gaps = 23/397 (5%)
Query: 7 GRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
++ Q D ++ ++D G ++ +M G P V NAL+ L + I
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 654
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS------SVMYNLV 118
A MV G P+ T+ + LCR+ + + L L+ S + S +V YN++
Sbjct: 655 EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV-SELKSFGWDPDTVTYNIL 713
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM---V 175
+D K G A L EM G+ P TY++++D + E + R+ G M V
Sbjct: 714 VDGLWKSGQTEQAITVLEEMV-GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRV 772
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKT-YAAEMI---FKRACDEKIELQDDTCGCMLKALS 231
+ +P + +I L +G+ A E+I +++CD + T L L
Sbjct: 773 SRCCVPN--VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII--TYNSFLDGLC 828
Query: 232 KEGRVKEAIQIYHLISERGITVRDSD--YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K+ + EA ++ + + + V + ++ LCK Q +E C + D++ GY+P
Sbjct: 829 KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + C K + ++ +++DKG+ D S L++ +C +D+A+ L
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ + +V T++ ++DGL K + EA ++FD M
Sbjct: 949 GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 185/429 (43%), Gaps = 77/429 (17%)
Query: 51 NALLDALYRQNEI-RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLL 105
N +L +L R E R G M RDGV+P T++ + LC+S + E+ L+
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243
Query: 106 DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ G + V+ YN +ID K GD A RL+ + R+ P TYS +++G +
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEA-RRLHGDMSSRSCVPNVVTYSVLINGLCK---- 298
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
VG + E + L IQ+++ +++CD + T
Sbjct: 299 ------VGRIDEAREL-----------IQEMT------------RKSCDVLPNII--TYN 327
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSD--YYAFVNVLCKEHQPEEVCGLLRDVV 282
L L K+ EA ++ + + + V + ++ LCK Q +E C + D++
Sbjct: 328 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 387
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
GY+P + + V C K + ++ +++DKG+ D S L++ +C ++D
Sbjct: 388 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 447
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK--------------- 387
+A+ L + + +V T++ ++DGL K R EA ++FD M
Sbjct: 448 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTL 507
Query: 388 ------------------ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ + +F ++ L L ++ +A++ ++ ML++ PD+
Sbjct: 508 IDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDK 567
Query: 430 ATYKQVISG 438
T+ +I+G
Sbjct: 568 VTFNILIAG 576
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 185/420 (44%), Gaps = 18/420 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G+E++ + G P V N L+D+L + ++ A L+G M PN T+S++
Sbjct: 235 GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLIN 294
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGR- 142
LC+ G+ + L+ S + YN +D K+ A + + + +G
Sbjct: 295 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 354
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
++P T+S+++DG + + + + + M+ +P + ++ L K
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY--NALVNGLCKADKME 412
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + D+ + T ++ A K RV EA+++ H ++ RG T + + +
Sbjct: 413 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Query: 263 NVLCKEHQPEEVCGLLRDV-VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LCK + E + D+ ++ G +P + + G+ + E LL A+ D
Sbjct: 473 DGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDT 532
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ C + L + + +A+ ++ ++ +L+ D T+++L+ G K G E+A
Sbjct: 533 YAFNCCINGLSKL----GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588
Query: 382 IFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F+ M K L+ +F ++ LC ++ A D M +G P+ TY ++ G
Sbjct: 589 LFEEMVAKNLQ-PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 179/408 (43%), Gaps = 16/408 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P A N ++ L + ++ A +Y M+ + P+K T++++ C++G FE L
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ + ++ + +ID K G AA D L+ M N + P TY++++ G
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN-LGVPPNVVTYNALVHGLC 648
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + E + + + MV +P G+ ++ L +T A + +
Sbjct: 649 KSGRIEEACQFLEEMVSSGCVPDSITYGS--LVYALCRASRTDDALQLVSELKSFGWDPD 706
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K G+ ++AI + + +G Y ++ LCK EE L
Sbjct: 707 TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766
Query: 280 DV---VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG--LLLDSFCCSSLMEY 334
D+ V R +P + S + C G+ E EL+ ++ K +L + +S ++
Sbjct: 767 DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDG 826
Query: 335 YCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C + +A L ++ L+ S D T+ L+DGL K G+ +EA +FD M V
Sbjct: 827 LCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYV 886
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++++ LC ++ +A + M+ G PD TY ++ F
Sbjct: 887 PNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAF 934
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 167/392 (42%), Gaps = 21/392 (5%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + ++++D G + V M G P V N L+D+L + ++ A
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761
Query: 67 SCLYGAM---VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-------VMYN 116
L+G M V PN T+S++ LC+ G+ + L+ + S + YN
Sbjct: 762 RRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYN 821
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGR-NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
+D K+ A + + + +G ++P T+S+++DG + +T+ + + M+
Sbjct: 822 SFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI 881
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+P + + ++ L K A + + D+ + T ++ A K
Sbjct: 882 AGGYVPN--VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV-VERGYIPCAMELS 294
V EA+++ H ++ RG T + + ++ LCK Q E + D+ ++ G P +
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ G + E LL A+ D + C + L + +R + + + L + +K+
Sbjct: 1000 TLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKV 1059
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
T+++L+ G K G E+A +F+ M
Sbjct: 1060 -------TFNILIAGACKAGNFEQASALFEEM 1084
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 18/335 (5%)
Query: 115 YNLVIDFYSKKGDFGAAFD----RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+N ++ K G A D RL C P TYS++L Y+ +R
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPRCR-----PNHFTYSTLLRAT--YKAGGDVERT 166
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK-RACDEKIELQDDTCGCMLKA 229
+G + + N V+Q L G+T A IF+ + + T ++
Sbjct: 167 LGFFRRIRSSSRSVADYN-IVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K + ++++ + ERG Y ++ LCK EE L D+ R +P
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKG--LLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+ S + C G+ E EL+ + K +L + +S ++ C +A L
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345
Query: 348 --HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
++ L+ S D T+ L+DGL K G+++EA +FD M V + ++ +V+ L
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ +A + M+ G PD TY ++ F
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 440
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 14/264 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S ++D G + V+ M G+VP V N L++ L + +++ A + +M
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915
Query: 74 VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
V GV+P+ T+S++ C++ E++ G+ G +V+ +N +ID K
Sbjct: 916 VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS 975
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G AF ++M L P TY +++DG R ++ ++ M P
Sbjct: 976 GEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM------PDPDTYAF 1029
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ I LS +G A R + ++ T ++ K G ++A ++ +
Sbjct: 1030 NCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 1086
Query: 249 RGITVRDSDYYAFVNVLCKEHQPE 272
+ + + A ++ LCK Q E
Sbjct: 1087 KNLQPDVMTFGALIDGLCKAGQVE 1110
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 192/433 (44%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+++DC+SH V+ M G P N L++ L + + A +
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
G P +T++ + LC+ G+ GL ++G +V+ YN++ID K
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLV 251
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D + M + ++P TY+S++ G + + + + ++ M ++P F
Sbjct: 252 NEALDIFSYM-KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF-- 308
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ + GK A+ +FK + +E T ++ S + EA +++ +
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y + CK + +E L +++ +G P + + + C G+ +E
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++L + G L D F S L++ +C + KA L ++ D+A Y++L+D
Sbjct: 429 AQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILID 488
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+ K G +++A ++F + ++ + + +++ LC L +A++ M G P
Sbjct: 489 AMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPP 548
Query: 428 DEATYKQVISGFM 440
DE +Y +I GF+
Sbjct: 549 DEFSYNVIIRGFL 561
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD-KGLLLDSFCCSSLMEYYCSNR 339
++ R +PC ++ ++ +++ G++ LS ++ GL D + S L++ + +
Sbjct: 85 MLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQ 144
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D A ++ K+ KL D T++ L++GL K G+ +AV FD + + ++
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ LC + E A +M + G +P+ TY +I
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 194/405 (47%), Gaps = 11/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P+V A NA+L AL + A +M+R GV+PN +T++++ + LC G+ E
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 102 LGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+G++ ++V YN ++ + + G+ A ++ M N P T++S+++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + E + ++ MV + L P + + ++ +G + + +F +
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPD--VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ A K G +++A+ + + ERG+ + + + A ++ CK+ ++
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++ + G P + + + C G+ EL+ + K + D S+++ YC
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409
Query: 337 SNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+D A L+ K+ K KG L D TY L+ GL ++ R+ +A +F+ M +L V
Sbjct: 410 KVGNLDSAFQLNQKMLK-KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + KA+ HDEM++ G PD TY +I+G
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 184/441 (41%), Gaps = 35/441 (7%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKF 83
+G + + V MR G P N L+ A R E+ A + M +G PN
Sbjct: 165 RGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV 224
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + LC++G+ E + D + V YN ++ Y K G + +EM
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD- 197
R L P T++S++ + E + +V M E+ L N+ L D
Sbjct: 285 TQ-RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL------RMNEVTFTALIDG 337
Query: 198 -MGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVR 254
K + + + K +Q ++ K GR+ A ++ + + +
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y ++ CK + L + ++++G +P A+ S + C + + + EL
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKD 373
+L G+ D F ++L++ +C ++KA++LH ++ + KG L DV TY VL++GL K
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVLINGLSKS 516
Query: 374 GRMEEAVRIF-------------DYMKELKVVSSSSFVIVVSRL---CHLKELRKAMKNH 417
R +EA R+ Y + S + F VV+ L C +++A K +
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576
Query: 418 DEMLKMGHKPDEATYKQVISG 438
ML K D + Y +I G
Sbjct: 577 QSMLDRNWKLDGSVYSILIHG 597
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 173/394 (43%), Gaps = 23/394 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + +L Y G + L V+ M G VP V +L+ A + +
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVID 120
A L M G+ N+ T++ + C+ G + L ++ GI SV+ YN +I+
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G A + + EM + + P TYS+I+ G + + + ++ M++K +L
Sbjct: 372 GYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I+ L + + A +F+ ++ + T ++ KEG V++A+
Sbjct: 431 PDAITYSS--LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-----------C 289
++ + +G+ Y +N L K + +E LL + +P C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548
Query: 290 A-MELSRFVA---SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ E VA C KG KE +++ ++LD+ LD S L+ +C + KA+
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 608
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ H ++ + S + + L+ GLF++G + EA
Sbjct: 609 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 194/430 (45%), Gaps = 51/430 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL++ C L + ++ M+ G P A NALL+ L +QN++ S L MV
Sbjct: 167 SLIVGCCQTNALD-EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVE 225
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ F+++ V LC SGK+E +L+ I V YN ++D + K
Sbjct: 226 AGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDE 285
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +RL E GR P TY++++ G R ++ + R++ M + + P D
Sbjct: 286 A-ERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP-------DL 337
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V TY C+L L K G+++EA ++ ++ E+
Sbjct: 338 V---------TY---------------------NCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y VN LCK + ++ LL ++ERG P + + + C GK E
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++L + + D S+L++ YC ++ A A+ L S D A+Y +L+GL
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKASYSSMLEGL 481
Query: 371 FKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G++EEA + D M K+ +SS + +++ LC ++ +A+K M + G +P+
Sbjct: 482 CSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL 541
Query: 430 ATYKQVISGF 439
TY +I+G
Sbjct: 542 YTYSILINGL 551
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 180/410 (43%), Gaps = 56/410 (13%)
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
D P+ T+ + R+G ++VL + + + + +N ++ Y + GD
Sbjct: 18 DPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDR 77
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +P TY ++ G + ++ + + +++ M++K P + +
Sbjct: 78 ALSHFR---GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY--NC 132
Query: 191 VIQKLSDMGKTYAA----EMIFKRAC-DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I L MGK AA +M+ +R+C + I GC + + EA ++
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC-----CQTNALDEARKLMEK 187
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ E G+T Y A +N LCK++Q EEV LL ++VE G P + VA C GK
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH------------IKIEK 353
++E ++L +++K D +SLM+ +C ++D+A L I
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 354 LKG-----------------------SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L G S D+ TY+ LLDGL K G++EEA + + M E
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+V+ LC L ++ A + ML+ G +P+ T+ +I GF
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 156/372 (41%), Gaps = 49/372 (13%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+S D V M G P + N LLD L + ++ A L MV +P+
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371
Query: 82 KFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
T+S++ LC+ GK + ++ +L+ G + V +N +ID + K G L
Sbjct: 372 VVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL- 430
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E+ + TP TYS+++DG + + + + I+G+ +K
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKA------------------ 472
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+Y++ ML+ L G+V+EA ++ L++++G S
Sbjct: 473 ----SYSS---------------------MLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + LC + +E +L+ + ERG P S + C + ++ +L +
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
L+KG + D +SL++ +C ++D A + D Y++L+ G + G +
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV 627
Query: 377 EEAVRIFDYMKE 388
E+A+ + M E
Sbjct: 628 EKAIEVMQLMLE 639
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 175/427 (40%), Gaps = 48/427 (11%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----S 107
L+ L + I A L M++ P+ ++ + LC+ GK + +L S
Sbjct: 98 LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157
Query: 108 GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ + Y +I + A +L E LTP Y+++L+G + + E
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEA-RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEV 216
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRAC----------- 212
+++ MVE P F + V+ L + GK A E + ++ C
Sbjct: 217 SKLLEEMVEAGREPDTF--SYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274
Query: 213 ---------DEKIELQDDTCG-----------CMLKALSKEGRVKEAIQIYHLISERGIT 252
DE L +D G ++ S+ R+ +A ++ + + GI+
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ LCK + EE LL +VE+ P + S V C GK + L
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L +L++G + +++++ +C ++D+ + ++++ + DV TY L+DG K
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
RM++A I + +S+ ++ LC ++ +A + D M K G P + Y
Sbjct: 455 ANRMQDAFAILGISPD-----KASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509
Query: 433 KQVISGF 439
+I G
Sbjct: 510 ALIIGGL 516
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 143/324 (44%), Gaps = 22/324 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD G + E+ +M P V + L++ L + ++ A L M+ G
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402
Query: 78 VSPNKFTWSLVAQILCRSGKFE---VVLGLLD--SGIYSSVMYNLVIDFYSKKGDFGAAF 132
PN T++ + C++GK + VL L+ S V Y+ +ID Y K AF
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L ++P ++YSS+L+G K E + ++ LM ++ P S +I
Sbjct: 463 AILG-------ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTS--SHYALII 513
Query: 193 QKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
L D+ + A +++ +R C+ + T ++ L K RV++AI + ++ E
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLY----TYSILINGLCKTKRVEDAINVLDVMLE 569
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G + Y + ++ CK ++ + + + + G P + + ++ C G ++
Sbjct: 570 KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEK 629
Query: 309 VEELLSAVLDKGLLLDSFCCSSLM 332
E++ +L+KG D+ SLM
Sbjct: 630 AIEVMQLMLEKGCNPDAATYFSLM 653
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 18/262 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++D + G +G +V +M+ P V + L+D + N ++ A + G
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG-- 466
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYS--KKG 126
+SP+K ++S + + LC +GK E ++D +S Y L+I ++G
Sbjct: 467 ----ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D A L M + R P TYS +++G + ++ E + ++ +M+EK +P ++
Sbjct: 523 D--EALKMLQVM-SERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPD--VA 577
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I + K AA FK D E ++ + G V++AI++ L+
Sbjct: 578 TYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637
Query: 247 SERGITVRDSDYYAFVNVLCKE 268
E+G + Y++ + L E
Sbjct: 638 LEKGCNPDAATYFSLMRSLTTE 659
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 189/416 (45%), Gaps = 47/416 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EV+R ++ YGF ++++CN LL AL + NE +Y M++ + PN T+++ L
Sbjct: 151 EVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGL 210
Query: 93 CRSGKF---EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDR---LNEMCNGRNL 144
C++GK E V+ + + +S V YN +ID + KKG G + L EM + +
Sbjct: 211 CKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK-I 269
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+++++DG + E AA
Sbjct: 270 CPNEITFNTLIDGFCKDE-------------------------------------NVLAA 292
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ F+ + ++ T ++ LS G++ EAI ++ + G+ + A +N
Sbjct: 293 KNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALING 352
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CK+ +E L D+ E+ +P A+ + + + C G +E L +++LD+G+ +
Sbjct: 353 FCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPN 412
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ L+ C N+ + A L ++E + DV TY++L+ G KDG +A ++
Sbjct: 413 VSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + V + ++ ++ C L+ A+K +M K G + + TY +I GF
Sbjct: 473 EMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGF 528
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 141/296 (47%), Gaps = 5/296 (1%)
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+S S LD + EK VS L++ + L + V+ ++++ + ++A +
Sbjct: 94 YSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNL-EIHSACEV 152
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F+R D +L ++C +L AL K E +Y + +R I + + F+N LCK
Sbjct: 153 FRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCK 212
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK---GKWKEVEELLSAVLDKGLLLD 324
+ + ++ D+ G+ P + + + C K GK + +L +L + +
Sbjct: 213 AGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPN 272
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L++ +C + + A ++++ ++ TY+ L++GL +G+++EA+ ++D
Sbjct: 273 EITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWD 332
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M L + + +F +++ C K +++A K D++ + P+ T+ +I F
Sbjct: 333 KMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 43/276 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ S+ G + + ++ M G P + NAL++ ++ I+ A L+ +
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ PN T++ + C++G E L LD GI+ +V YN +I + + AA
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
LNEM N L TY+ ++ G + + +++++G M+ + P H
Sbjct: 434 KLLNEMEN-YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHV-------- 484
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
TY L D C EG +K A+++ + + G
Sbjct: 485 --------TYNT-------------LMDGYC--------MEGNLKAALKVRTQMEKEGKR 515
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
Y + CK + E+ LL +++E+G P
Sbjct: 516 ANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 189/435 (43%), Gaps = 8/435 (1%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S L+++ Y + LE+ M VP+ + A+++ L ++ LA
Sbjct: 110 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 169
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDF 121
+ L M G+ PN +S + G+ E LLD SG+ + YN +I
Sbjct: 170 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 229
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
SK G A L E+ GR L P T+ + + G + K + + M++ L+P
Sbjct: 230 LSKAGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 288
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ L +I G A IF+ + TC + L K GRV+EA++
Sbjct: 289 NNPLY--TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + E+G+ Y + ++ CK+ + E+ L ++ +G P + V C
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + +L + +KGL DS S++++ YC + + +A +L ++
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L+ G K+G ME+A+ +F M + ++ SF ++ C ++++A + EM+
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 526
Query: 422 KMGHKPDEATYKQVI 436
PD TY VI
Sbjct: 527 AKQIMPDHVTYTTVI 541
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 197/445 (44%), Gaps = 42/445 (9%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+ G P +AC+AL+D R+ +I + MV G+ N T++++ LC
Sbjct: 32 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 91
Query: 94 RSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ GK E++ G++ G +S + L+I+ Y ++ + G A + L+EM RNL P
Sbjct: 92 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKRNLVPSA 150
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---------------------KHFLSG 187
+Y ++++G + ++++++ M L P + L G
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 210
Query: 188 N------------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ +I LS GK A ++ T G + SK G+
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ EA + + + + G+ + Y +N K E + R + G +P S
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
F+ G+ +E ++ S + +KGL+ D F SSL+ +C +++KA LH ++ LK
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM-CLK 389
Query: 356 G-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA 413
G + ++ Y+ L+DGL K G ++ A ++FD M E + S ++ ++ C + + +A
Sbjct: 390 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449
Query: 414 MKNHDEMLKMGHKPDEATYKQVISG 438
EM G +P Y ++ G
Sbjct: 450 FSLFHEMPSKGVQPHSFVYNALVHG 474
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 176/411 (42%), Gaps = 36/411 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ + G M+ L ++R + G +P V C+A + L + ++ A ++ +
Sbjct: 294 TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 353
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
G+ P+ FT+S + C+ G+ E L D GI ++ +YN ++D K GD
Sbjct: 354 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 413
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD + E + L P TYS+++DG + E + + M K + P F+
Sbjct: 414 ARKLFDGMPE----KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY- 468
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDE--KIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ G A +F+ + L +T ++ K +++EA Q++
Sbjct: 469 -NALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNT---LIDGYCKSCKIQEASQLFQE 524
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI-----------------P 288
+ + I Y ++ CK + EE L +++ ER I P
Sbjct: 525 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKP 584
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C + E +L V+ KG+L L+ C + +A L
Sbjct: 585 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 644
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
++ +L +A L+ + G+M+EA R+F+ +K L +V ++ +I
Sbjct: 645 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 695
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 167/408 (40%), Gaps = 44/408 (10%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGK-------FE----------------VVLGLLDSGI 109
M G+ PN +T++++ LCR+ + FE ++ G + G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 110 YSSVM-----------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
V+ YN++I K G A + L M P T+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFC 119
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++G R + ++ M ++ L+P G +I L A + ++
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYG--AMINGLCHCKDLSLANKLLEKMT 177
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ ++ + EGR++EA ++ +S G+ Y A ++ L K + E
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L ++ RG P A+ F+ GK E + +LD GL+ ++ + L+
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ + +A+++ + L DV T + GL K+GR++EA+++F +KE +V
Sbjct: 298 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 357
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++S C E+ KA + HDEM G P+ Y ++ G
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 156/372 (41%), Gaps = 33/372 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++ + +G E++ M + G P + NAL+D L + +I+ A L+ M
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 423
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
G+ P+ T+S + C+S F + + G+ S +YN ++ K+GD
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483
Query: 131 AFDRLNEMCNGRNLTPGFST---YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + EM L GF+T +++++DG + K + + ++ M+ K+++P H
Sbjct: 484 AMNLFREM-----LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 538
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
VI GK A ++FK E+Q+ + V ++ +
Sbjct: 539 T--VIDWHCKAGKMEEANLLFK-------EMQE-----------RNLIVDTVFALFEKMV 578
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+G+ + Y + CKE E L +VV +G + + + C +
Sbjct: 579 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 638
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +LL + + GL CS+L+ + ++D+A + ++ L D T L+
Sbjct: 639 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 698
Query: 368 DGLFKDGRMEEA 379
+G D E+A
Sbjct: 699 NGNLNDTDSEDA 710
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 196/444 (44%), Gaps = 49/444 (11%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR +GF P NALL L + A LY M++ G SP+ T++ + C+ G+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 98 FEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ L + D + V YN +I+ + K A L M + NL P TY+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS-ENLVPDVVTYN 119
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S+++G + + D L+V+K P + ++ + + ++ A +F
Sbjct: 120 SLVNGLCKNGRV---DEARMLIVDKGFSP-NVITYSTLISGLCRELRGVSEALKLFGSVL 175
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ E + T ++ L KE RV EA +++ + + G+ Y F++ LCK + E
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235
Query: 273 EVCGLLRDVVERGYIP--------------------------------C---AMELSRFV 297
+ +L+D+ E+G +P C A+ + +
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ---IDKAIALHIKIEKL 354
QC GKWK+ +L +G+ + L++ C RQ I +AI L + +
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA 413
DV TY L+DGL K G++++A R+ M+ + + ++ ++S LC L+++ +A
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415
Query: 414 MKNHDEMLKMGHKPDEATYKQVIS 437
++ M++ G PD TY +IS
Sbjct: 416 LELFVAMVEKGCVPDTITYGTIIS 439
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 136/306 (44%), Gaps = 36/306 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+++ + G+ P V N L+D L +++ + A L+ +V+ G+ P+ T+++
Sbjct: 166 EALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 225
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
LC++G+ E L L++ +KG P
Sbjct: 226 DGLCKAGRVEDAL--------------LMLKDMDEKG-----------------CVPDVV 254
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+++++++G + ++ + ++ ++ M K P + +S N + + GK A FK
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP-NAISFNTLICGQCR-AGKWKKAMTTFK 312
Query: 210 RACDEKIELQDDTCGCMLKALSK---EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
++ T ++ L K EGR+KEAI ++ + E+G Y A ++ L
Sbjct: 313 EMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLG 372
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + ++ LL + +G IP + ++ CG K E EL A+++KG + D+
Sbjct: 373 KAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTI 432
Query: 327 CCSSLM 332
+++
Sbjct: 433 TYGTII 438
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y A ++ LC + + L +++ GY P + + + C G+ E ++ +
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+G + D ++L+ +C ++D+A + ++ DV TY+ L++GL K+GR++
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132
Query: 378 EA-VRIFDYMKELKVVSSSSFVIVVSRLC-HLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
EA + I D V++ S+ + S LC L+ + +A+K +LK G++P+ TY +
Sbjct: 133 EARMLIVDKGFSPNVITYSTLI---SGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189
Query: 436 ISGFM 440
I G +
Sbjct: 190 IDGLL 194
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++ +D G D L + + M G VP V + NA+++ L ++ + A
Sbjct: 213 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 272
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVIDF 121
L M G SPN +++ + CR+GK++ + +L G+ +V+ YN+++D
Sbjct: 273 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 332
Query: 122 YSK---KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
K +G A + M + P TYS+++DG + K + + R++G M K
Sbjct: 333 LCKARQEGRIKEAITLFDAMIE-KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391
Query: 179 LLPKHF 184
+P +
Sbjct: 392 CIPNVY 397
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL---CHLKELRKAMKNHD 418
TY+ LL GL GRM +A +++ M +K S V + L C + EL +A+K D
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERM--IKAGYSPDVVTYNTLLHGFCKVGELDEALKIFD 69
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+K G PD TY +I+GF
Sbjct: 70 GAVKRGFVPDVVTYNALINGF 90
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D E + MM+ G VP + NA+L + N+ LY M R + +T++++
Sbjct: 184 DAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMI 243
Query: 90 QILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC+ GK + + S G+ +V+ YN VI Y +G A L+ M N R +
Sbjct: 244 NVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKN-RGV 302
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--DYVIQKLSDMGKT- 201
P TY S++ G + K E + I+ M E LLP D K D+ K
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNK-GDLVKAF 361
Query: 202 -YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
Y EM+ +RA + T ++ AL EG++ EA + + + GI Y
Sbjct: 362 GYRDEMV-RRAILPTVS----TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNI 416
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N C+ ++ L +++ +G P + + + + + K ++L ++ +G
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D ++L++ +C+N +D+A AL +++K D TY+ L+ G ++G++EEA
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAR 536
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ MK + S+ ++S ++ A DEML +G P TY +I G
Sbjct: 537 ELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGL 596
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 168/407 (41%), Gaps = 42/407 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P V N ++ + + A + M GV P+ +T+ + +C+ GK
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321
Query: 98 FEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E G+L+ + ++V YN +ID Y KGD AF +EM R + P STY+
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVR-RAILPTVSTYN 380
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++ K + +D ++ M + ++P + +I G A +
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY--NILINGYCRCGNAKKAFNLHDEMI 438
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ I+ T ++ LSK R+K A ++ I G + + A ++ C +
Sbjct: 439 SKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD 498
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL+++ +R +P + + + +C +GK +E ELL + +G+ D ++L+
Sbjct: 499 RAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLI 558
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
Y I+ A + ++ + + + TY+ L+ GL K+ + + A
Sbjct: 559 SGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLA------------- 605
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+EL K EM+ G PD++TY +I G
Sbjct: 606 ---------------EELLK------EMVSKGITPDDSTYFSLIEGI 631
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 8/231 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP N L++ R + A L+ M+ G+ P T++ + +L + + +
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L + I +M+N +ID + G+ AF L EM + RN+ P TY++++
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM-DKRNIVPDEVTYNTLMQ 524
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R K E + ++ M + + P H + +I S G A I
Sbjct: 525 GRCREGKVEEARELLKEMKRRGIRPDHI--SYNTLISGYSKRGDINDAFTIRDEMLSIGF 582
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
T +++ L K + A ++ + +GIT DS Y++ + + K
Sbjct: 583 NPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 189/435 (43%), Gaps = 8/435 (1%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S L+++ Y + LE+ M VP+ + A+++ L ++ LA
Sbjct: 309 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 368
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDF 121
+ L M G+ PN +S + G+ E LLD SG+ + YN +I
Sbjct: 369 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 428
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
SK G A L E+ GR L P T+ + + G + K + + M++ L+P
Sbjct: 429 LSKAGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 487
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ L +I G A IF+ + TC + L K GRV+EA++
Sbjct: 488 NNPLY--TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 545
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + E+G+ Y + ++ CK+ + E+ L ++ +G P + V C
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + +L + +KGL DS S++++ YC + + +A +L ++
Sbjct: 606 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L+ G K+G ME+A+ +F M + ++ SF ++ C ++++A + EM+
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 725
Query: 422 KMGHKPDEATYKQVI 436
PD TY VI
Sbjct: 726 AKQIMPDHVTYTTVI 740
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 197/445 (44%), Gaps = 42/445 (9%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+ G P +AC+AL+D R+ +I + MV G+ N T++++ LC
Sbjct: 231 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 290
Query: 94 RSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ GK E++ G++ G +S + L+I+ Y ++ + G A + L+EM RNL P
Sbjct: 291 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKRNLVPSA 349
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---------------------KHFLSG 187
+Y ++++G + ++++++ M L P + L G
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 409
Query: 188 N------------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ +I LS GK A ++ T G + SK G+
Sbjct: 410 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 469
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ EA + + + + G+ + Y +N K E + R + G +P S
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 529
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
F+ G+ +E ++ S + +KGL+ D F SSL+ +C +++KA LH ++ LK
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM-CLK 588
Query: 356 G-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA 413
G + ++ Y+ L+DGL K G ++ A ++FD M E + S ++ ++ C + + +A
Sbjct: 589 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 648
Query: 414 MKNHDEMLKMGHKPDEATYKQVISG 438
EM G +P Y ++ G
Sbjct: 649 FSLFHEMPSKGVQPHSFVYNALVHG 673
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 175/424 (41%), Gaps = 44/424 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ + G M+ L ++R + G +P V C+A + L + ++ A ++ +
Sbjct: 493 TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 552
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
G+ P+ FT+S + C+ G+ E L D GI ++ +YN ++D K GD
Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD + E + L P TYS+++DG + E + + M K + P F+
Sbjct: 613 ARKLFDGMPE----KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 668
Query: 188 N--------------------------------DYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ +I K A +F+ ++
Sbjct: 669 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I T ++ K G+++EA ++ + ER + V Y + + K Q EV
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L +V +G P + + + C + E +L V+ KG+L L+
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + +A L ++ +L +A L+ + G+M+EA R+F+ +K L +V +
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 908
Query: 396 SFVI 399
+ +I
Sbjct: 909 TTLI 912
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 161/372 (43%), Gaps = 15/372 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++ + +G E++ M + G P + NAL+D L + +I+ A L+ M
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
G+ P+ T+S + C+S F + + G+ S +YN ++ K+GD
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682
Query: 131 AFDRLNEMCNGRNLTPGFST---YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + EM L GF+T +++++DG + K + + ++ M+ K+++P H
Sbjct: 683 AMNLFREM-----LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
VI GK A ++FK + + + T ++ +K G+ E ++ +
Sbjct: 738 T--VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+G+ + Y + CKE E L +VV +G + + + C +
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 855
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +LL + + GL CS+L+ + ++D+A + ++ L D T L+
Sbjct: 856 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 915
Query: 368 DGLFKDGRMEEA 379
+G D E+A
Sbjct: 916 NGNLNDTDSEDA 927
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 177/427 (41%), Gaps = 10/427 (2%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
SC G + ++ C S G + ++ G P A + + ++
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMY-NLV 118
A+ + M+ G+ PN ++++ ++G L + G+ V +
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I K G A +E+ + L P TYSS++ G + + E + + M K
Sbjct: 531 IHGLLKNGRVQEALKVFSEL-KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P F+ + ++ L G A +F ++ +E T M+ K V E
Sbjct: 590 IAPNIFIY--NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 647
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++H + +G+ Y A V+ CKE E+ L R+++++G+ + + +
Sbjct: 648 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLID 706
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C K +E +L ++ K ++ D +++++++C ++++A L ++++ +
Sbjct: 707 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 766
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D TY L+ G K G+ E +F+ M V ++ +V+ C L +A K
Sbjct: 767 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 826
Query: 418 DEMLKMG 424
DE++ G
Sbjct: 827 DEVVGKG 833
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 172/427 (40%), Gaps = 38/427 (8%)
Query: 35 YRMMRVYGFVPAVSACNA-LLDALYRQNEI----RLASCLYGAMVRDGVSPNKFTWSLVA 89
++ + V +P S N ++ A+ QN++ RL Y + + GV ++S++A
Sbjct: 54 WKTIMVSSHIP--SKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILA 111
Query: 90 QILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC S F + G+L I SS++ +++ F + G FD L
Sbjct: 112 VQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDIL--------- 162
Query: 145 TPGFSTYS--SILDGARRYEKTEVSDRIVGLMV---------EKKLLPKHFLSGNDYVIQ 193
+Y +LD A +D I+ ++ EK L+P + +
Sbjct: 163 ---IDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTY--TIITA 217
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
L + A++ F+ ++ + C ++ +EG + E ++I ++ GI +
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ LCK + E+ +L+ ++ G P + + C + ELL
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + L+ + +++ C + + A L K+ +V Y L+ G +
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397
Query: 374 GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
GR+EEA R+ D M V + ++S L ++ +A E+ G KPD T+
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457
Query: 433 KQVISGF 439
I G+
Sbjct: 458 GAFILGY 464
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 19/104 (18%)
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-------------------SSSS 396
G +D+L+D + G ++EA +F K ++ ++ +
Sbjct: 152 GGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYT 211
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ I+ + LC K + +A +EM K G KPD +I GFM
Sbjct: 212 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFM 255
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 209/436 (47%), Gaps = 9/436 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S L++ Y +G E +R+++ G +++ACN+LL L + + LA +
Sbjct: 182 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 241
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSK 124
Y +VR GV N +T +++ LC++ K E L + G++ V+ YN +I+ Y +
Sbjct: 242 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 301
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
+G AF+ ++ M +G+ L P TY++I++G + K + ++ M++ + P
Sbjct: 302 QGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT- 359
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + ++ + AE IF + + + ++ LSK G + +A++ +
Sbjct: 360 -ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ + Y + C+ E + +++E+G + + + + C +
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
E +EL + + ++G+ D + ++L+ Y + ++KA+ L + + DV TY+
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+DG K ME+ +++ M ++ + S+ I+++ C++ + +A + DEM++
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598
Query: 424 GHKPDEATYKQVISGF 439
G + T ++ G+
Sbjct: 599 GFEATIITCNTIVKGY 614
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 194/453 (42%), Gaps = 44/453 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ Y +GL + E+ M G P V NA+++ L + + A + M++ G
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 78 VSPNKFTWSLVAQILCRSGK----------------------FEVVLGLL---------- 105
+SP+ T++++ CR+ F ++GLL
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Query: 106 -------DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++G+ +V+Y ++I + + G A +EM + TY++IL+G
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNTILNG 473
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + +D + M E+ + P + +I S G A +F+ ++
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFPDFYTFTT--LINGYSKDGNMNKAVTLFEMMIQRNLK 531
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ K +++ ++++ + R I Y +N C E L
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 591
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++VE+G+ + + V C G + +E LS +L KG++ D ++L+ +
Sbjct: 592 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 651
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSS 396
+D+A AL K+E DV TY+V+L+G + GRM+EA I M E V S+
Sbjct: 652 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 711
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ +++ L++A + HDEML+ G PD+
Sbjct: 712 YTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 205/441 (46%), Gaps = 28/441 (6%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE---IRLASCLYGAM 73
+ L Y H+G L++++ M P + CN LL L R I A ++ M
Sbjct: 136 IALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDM 195
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS------SVMYNLVIDFYSKKGD 127
V+ GVS N T++++ C GK E LG+L+ + +V YN ++ SKKG
Sbjct: 196 VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGR 255
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ L +M L P TY++++ G + + + +IV LM + +LP L
Sbjct: 256 LSDLKELLLDM-KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD--LCT 312
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAI 240
+ +I L + G + + ++LQ D GC LS E R
Sbjct: 313 YNILINGLCNAGSMREGLELMDAM--KSLKLQPDVVTYNTLIDGCFELGLSLEAR----- 365
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRFVAS 299
++ + G+ + + LCKE + E V ++++V+ G+ P + + +
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G E++ + KG+ +++ +++++ C R++D+A L K +D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
TY L+ G F++ ++E+A+ ++D MK++K+ + S+F ++ LCH + AM+ D
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 419 EMLKMGHKPDEATYKQVISGF 439
E+ + G PD++T+ +I G+
Sbjct: 546 ELAESGLLPDDSTFNSIILGY 566
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 200/467 (42%), Gaps = 41/467 (8%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+++++ Y +G D L + RM+ + P N +L A+ ++ + L
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGD 127
M ++G+ PN+ T++ + C+ G F++V + + + + YN++I+ G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDG---------ARRYEKTEVSDRIVGLMVE-- 176
+ ++ M L P TY++++DG AR+ + +D + V
Sbjct: 326 MREGLELMDAM-KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 177 -------------------KKLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKRACD 213
K+L+ H S + +I+ +G A + +
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ I++ T +L AL KE ++ EA + + +RG V + Y + +E + E+
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ ++ + P + + C GK + E + + GLL D +S++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
YC +++KA + + K D T ++LL+GL K+G E+A+ F+ + E + V
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD 624
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ ++S C K+L++A EM + G +PD TY IS M
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 11/287 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V ++ ++GF P + + L+ A + ++ A + M + G+ N T + + L
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 93 CRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ K + LL+S I V Y +I + ++ A + +EM + +TP
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK-ITPT 520
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
ST++S++ G + KTE++ + E LLP S + +I G+ A
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD--STFNSIILGYCKEGRVEKAFEF 578
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLC 266
+ + + + TC +L L KEG ++A+ ++ LI ER V Y ++ C
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFC 636
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
K+ + +E LL ++ E+G P + F++ GK E +ELL
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 6/283 (2%)
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ--KLSDMGKTYAAEMIFKRACDEKIELQD 220
K V+ +I M+ KL P + L+ N +I + +A +F + L
Sbjct: 146 KPHVALQIFQKMIRLKLKP-NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 221 DTCGCMLKALSKEGRVKEAI-QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ EG++++A+ + ++SE + + Y + + K+ + ++ LL
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D+ + G +P + + V C G KE +++ + +L D + L+ C+
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ + + L ++ LK DV TY+ L+DG F+ G EA ++ + M+ V ++ +
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGFM 440
I + LC ++ + E++ M G PD TY +I ++
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 202/436 (46%), Gaps = 13/436 (2%)
Query: 14 ALSLVLDCYSHKGL--FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
L+++++C+ H F V M G P + LL+ L + +I A L+
Sbjct: 12 TLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFD 71
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKG 126
MV+ G P+ T+S + LC+ G + + LL + G +V+ Y+ +ID K
Sbjct: 72 EMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDK 131
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A + L+EM N R ++P TYSSIL G ++ + + MVE+ ++P
Sbjct: 132 LITEAMEFLSEMVN-RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTF 190
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ LS G A+ +F+ ++ +E +T ++ + ++ EA ++++++
Sbjct: 191 --NILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+G Y + CK + +E GLL ++ + P + S + C G+
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
++ ++LL + GLL D S +++ C +D+A L +++ K ++ Y +L
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
Query: 367 LDGLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+ G+ G++E A +F ++K ++ ++ +++S L +A + +M G
Sbjct: 369 IQGMCNFGKLEAARELFSNLFVKGIQ-PDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 425 HKPDEATYKQVISGFM 440
P+ TY +I GF+
Sbjct: 428 CLPNSCTYNVIIQGFL 443
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 8/315 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +L + + G + +++ M +P N L+D L ++ I A C++ M+
Sbjct: 156 SSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE 215
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
GV PN T++ + C + + L + G SV YN++I + K G
Sbjct: 216 KGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDE 275
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L EM + + LTP TYS+++ G + + + + +++ M LLP L
Sbjct: 276 AKGLLAEMSH-KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD--LMTYSI 332
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ L G A + K + KIE +++ + G+++ A +++ + +G
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y ++ L K E C L RD+ G +P + + + G
Sbjct: 393 IQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAG 452
Query: 311 ELLSAVLDKGLLLDS 325
L+ ++ +G DS
Sbjct: 453 RLIEEMVGRGFSADS 467
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 109/286 (38%), Gaps = 43/286 (15%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + ++D Y + + +++ +M G P+V + N L+ + I
Sbjct: 216 KGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDE 275
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVID 120
A L M ++P+ T+S + + C+ G+ + LL+ G+ +M Y++V+D
Sbjct: 276 AKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLD 335
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K+G AF+ L M E K+
Sbjct: 336 GLCKQGHLDEAFELLKA------------------------------------MQESKIE 359
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F+ +IQ + + GK AA +F + I+ T M+ L K G EA
Sbjct: 360 PNIFIY--TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+++ ++ G Y + + L+ ++V RG+
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGF 463
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 198/430 (46%), Gaps = 10/430 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRV-YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
L++ Y +DG+ V++MM +P V +ALL L + LA L+ M+
Sbjct: 161 LLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMIN 220
Query: 76 DGVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ P+ + ++ V + LC S E+++ + +G + V YN++ID KK
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++ G+ L P TY +++ G + ++ EV ++ M+ + P +
Sbjct: 281 AVGIKKDLA-GKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE--AAVSS 337
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ L GK A + KR + + ++ +L K EA ++ + + G
Sbjct: 338 LVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIG 397
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ D Y +++ C+ + + L ++++ G P + + C G E
Sbjct: 398 LCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAE 457
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L++ +++K L +SLM YCS +I+KA+ L+ ++ + T+ LL GL
Sbjct: 458 SLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGL 517
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
F+ G + +AV++F M E V + ++ +++ C + KA + +EM++ G PD
Sbjct: 518 FRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDT 577
Query: 430 ATYKQVISGF 439
+Y+ +I G
Sbjct: 578 YSYRPLIHGL 587
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 183/435 (42%), Gaps = 50/435 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A+S +++ +G + L + + + +G P + NAL+D+L + A L+ M
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
+ G+ PN T+S++ + CR GK + L L D G+ SV YN +I+ + K GD
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDI 453
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AA + EM N + L P TY+S++ G K + R+ M K ++P +
Sbjct: 454 SAAESLMAEMIN-KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY---- 508
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
T +L L + G +++A++++ ++E
Sbjct: 509 ---------------------------------TFTTLLSGLFRAGLIRDAVKLFTEMAE 535
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + C+E + L +++E+G +P + C G+ E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ + + L+ C + L+ +C ++++A+++ + LD+ Y VL+D
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655
Query: 369 GLFKDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
G K + + + M + + V +S + S+ KE A D M+ G
Sbjct: 656 GSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE---AFGIWDLMINEG 712
Query: 425 HKPDEATYKQVISGF 439
P+E TY VI+G
Sbjct: 713 CVPNEVTYTAVINGL 727
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 180/418 (43%), Gaps = 50/418 (11%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F GLE+ M F P+ +A ++L++ L ++ ++ A L + GVSPN F ++
Sbjct: 313 FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNA 372
Query: 88 VAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ LC+ F+ L D G+ + V Y+++ID + ++G A L EM +
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID-M 431
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
L P Y+S+++G ++ ++ ++ M+ KKL P V+ S MG
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT--------VVTYTSLMG--- 480
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+G++ +A+++YH ++ +GI + +
Sbjct: 481 --------------------------GYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLL 514
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ L + + L ++ E P + + + C +G + E L+ +++KG++
Sbjct: 515 SGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D++ L+ C Q +A + K L+ Y LL G ++G++EEA+ +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 383 FDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M +L +V V++ L H K+ + + EM G KPD+ Y +I
Sbjct: 635 CQDMGLRGVDLDLVCYG--VLIDGSLKH-KDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 188/443 (42%), Gaps = 51/443 (11%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG L +Y M G VP++ LL L+R IR A L+ M V PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGI------YSSVMYNLVIDFYSKKGD-FGA 130
+ T++++ + C G FE + +++ GI Y +++ L + + + F
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 131 AFDR----LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
+ LNE+C Y+ +L G R K E + + M L
Sbjct: 602 GLHKGNCELNEIC-----------YTGLLHGFCREGKLEEALSVCQDM---------GLR 641
Query: 187 GNDYVI---QKLSDMGKTYAAEMIF----KRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
G D + L D + +F K D ++ D M+ A SK G KEA
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKE---HQPEEVCGLLRDVVERGYIPCAMELSRF 296
I+ L+ G + Y A +N LCK ++ E +C +R +P + F
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR---PGNSVPNQVTYGCF 758
Query: 297 VASQC-GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ G G K+ EL +A+L KGLL ++ + L+ +C ++++A L ++
Sbjct: 759 LDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDG 817
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
S D TY ++ L + +++A+ +++ M E + ++ ++ C E+ KA
Sbjct: 818 VSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Query: 415 KNHDEMLKMGHKPDEATYKQVIS 437
+ +EML+ G KP+ T + IS
Sbjct: 878 ELRNEMLRQGLKPNTETSETTIS 900
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 13/389 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
E + +++ +S GL + L VY M V +PA+ ACN +LD L ++
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDGLVKKGRFDT 176
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVID 120
+YG MV G SPN T+ + CR G F L D I + V+Y ++I
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ A M N + P TY++++DG + + + + M+ LL
Sbjct: 237 GLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLL 295
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P G +I L + +A + C++ K G + EA+
Sbjct: 296 PNVVTFG--ILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ I + I Y + LC + EE GLL+++ ++G++P A+ + +
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-D 359
C +G ++ E+ S + +KG+ + S+L++ YC +++ A+ L+ ++ +KG L D
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM-VIKGLLPD 472
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
V Y L+DG FKDG +EA R+ M+E
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C +L L K+GR ++Y + RG + Y ++ C++ + L +++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E+ P + + + CG+ + E E + + + G+L + + +++M+ YC +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 343 KAIALHIK--------------------------IEKLKGSLDVAT---------YDVLL 367
KA+ L+ + + K +D+A+ Y+ L+
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG K G + EA+ + +++ +++ ++ I++ LC + + +A EM K G
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 427 PDEATYKQVISGF 439
P+ TY +I G+
Sbjct: 401 PNAVTYNTLIDGY 413
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 33/259 (12%)
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS-------------------------- 247
E + + G ++ A S+ G V+EA+ +Y+ +
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 248 ------ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
RG + Y ++ C++ + L +++E+ P + + + C
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ + E E + + + G+L + + +++M+ YC + KA+ L+ ++ +V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVV 299
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
T+ +L+DGL K M A + M VV + + ++ C L +A+ H E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 421 LKMGHKPDEATYKQVISGF 439
K PD TY +I G
Sbjct: 360 EKHEILPDVFTYSILIKGL 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 237 KEAIQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVE------RGYIPC 289
+A++++H +S R ++ Y A ++VL + L+RD+++ R I C
Sbjct: 51 NQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICC 110
Query: 290 A-------MELSRFVASQCGK-----GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +E S+F + G + VEE L +L C+ +++
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS- 396
+ D ++ + S +V TY L+DG + G +A R+FD M E K+ +
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ I++ LC + +A M G P+ TY ++ G+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 13/389 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
E + +++ +S GL + L VY M V +PA+ ACN +LD L ++
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDGLVKKGRFDT 176
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVID 120
+YG MV G SPN T+ + CR G F L D I + V+Y ++I
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ A M N + P TY++++DG + + + + M+ LL
Sbjct: 237 GLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLL 295
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P G +I L + +A + C++ K G + EA+
Sbjct: 296 PNVVTFG--ILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ I + I Y + LC + EE GLL+++ ++G++P A+ + +
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-D 359
C +G ++ E+ S + +KG+ + S+L++ YC +++ A+ L+ ++ +KG L D
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM-VIKGLLPD 472
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
V Y L+DG FKDG +EA R+ M+E
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 36/253 (14%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C +L L K+GR ++Y + RG + Y ++ C++ + L +++
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E+ P + + + CG+ + E E + + + G+L + + +++M+ YC +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 343 KAIALH----------------IKIEKL----------KGSLDVAT---------YDVLL 367
KA+ L+ I I+ L K +D+A+ Y+ L+
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG K G + EA+ + +++ +++ ++ I++ LC + + +A EM K G
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 427 PDEATYKQVISGF 439
P+ TY +I G+
Sbjct: 401 PNAVTYNTLIDGY 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 33/259 (12%)
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS-------------------------- 247
E + + G ++ A S+ G V+EA+ +Y+ +
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 248 ------ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
RG + Y ++ C++ + L +++E+ P + + + C
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ + E E + + + G+L + + +++M+ YC + KA+ L+ ++ +V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
T+ +L+DGL K M A + M VV + + ++ C L +A+ H E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 421 LKMGHKPDEATYKQVISGF 439
K PD TY +I G
Sbjct: 360 EKHEILPDVFTYSILIKGL 378
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 237 KEAIQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVE------RGYIPC 289
+A++++H +S R ++ Y A ++VL + L+RD+++ R I C
Sbjct: 51 NQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICC 110
Query: 290 A-------MELSRFVASQCGK-----GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +E S+F + G + VEE L +L C+ +++
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS- 396
+ D ++ + S +V TY L+DG + G +A R+FD M E K+ +
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ I++ LC + +A M G P+ TY ++ G+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 195/417 (46%), Gaps = 15/417 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++Y+ M YG++ V+ N ++ AL ++ + A + ++ G+ PN T++++
Sbjct: 149 KMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGA 208
Query: 93 CRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ G ++ L L+ S SV YN ++ + K G+ A + EM G+ +
Sbjct: 209 IKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEML-GKEI 267
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY++++DG R E + R+ +VEK LLP + + +I LS G A
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNS--IIHWLSMEGDMEGA 325
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-DYYAFVN 263
++ D++I T +++ L + G + EA + +I E + VRD+ + +N
Sbjct: 326 SLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSL-VRDAFSHNVVIN 384
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LC+ + LL ++ RG +P + + C GK + ++ ++ G
Sbjct: 385 YLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKP 444
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ +S++ + D AI L + ++ G DV TY+ L+ G G++++A +F
Sbjct: 445 NLLIYNSVINGFAKEGSFDPAILLIDTLRRM-GLFDVVTYNTLIHGYCNCGKIDQAFALF 503
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ +++S ++ +++ LC + +A + M+ G PD TY +I+ F
Sbjct: 504 SEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSF 560
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 135/313 (43%), Gaps = 11/313 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y+ G + + + G +P N+++ L + ++ AS L M+
Sbjct: 277 LVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKR 336
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAF 132
+ P++FT+S+V + LCR+G L S + + +N+VI++ + + A
Sbjct: 337 IYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAK 396
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L M R L P T+ +++D + K E + ++ M++ P + + VI
Sbjct: 397 QLLANMY-VRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNS--VI 453
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ G A ++ ++ L D T ++ G++ +A ++ + GI
Sbjct: 454 NGFAKEGSFDPAILLIDTL--RRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGI 511
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N LCK + L++ +V RG IP + + + S K +EV E
Sbjct: 512 LASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIE 571
Query: 312 LLSAVLDKGLLLD 324
L ++ KG++ D
Sbjct: 572 LHDYMVLKGVVPD 584
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 204/435 (46%), Gaps = 16/435 (3%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR-QNEIRLASC--LYGAM 73
+ L Y H G L+V++ M P + CN LL L R + +AS ++ M
Sbjct: 136 IALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDM 195
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS------SVMYNLVIDFYSKKGD 127
V+ GVS + T++++ C GK E LG+L+ + +V YN ++ SKKG
Sbjct: 196 VKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGR 255
Query: 128 FGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D L +M RN L P TY++++ G + + + +IV LM + +LP L
Sbjct: 256 LSDVKDLLLDM--KRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPD--LC 311
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I + + G + K++ T ++ + G EA ++ +
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRFVASQCGKGK 305
G+ + + LCKE + EEV ++++VE G+ P + + + G
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E++ + KG+ +++ +++++ C R++D+A L K +D TY
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ G F++ ++E+A ++D MK +K+ + ++F ++ LCH + AM+ DE+ + G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 425 HKPDEATYKQVISGF 439
PD+ T+ +I G+
Sbjct: 552 LLPDDCTFNSIILGY 566
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 202/481 (41%), Gaps = 69/481 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+++++ Y +G D L + RM+ + P N +L A+ ++ + L
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLD 265
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGD 127
M R+G+ PN+ T++ + C+ G F++V + + I + YN++I+ G
Sbjct: 266 MKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGS 325
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ ++ M L P TY++++DG +E +GL +E K L +
Sbjct: 326 IREGLELMDVM-KSLKLQPDVVTYNTLIDGC--FE--------LGLSLEAKKLMEQM--E 372
Query: 188 NDYVIQKLSDMGKTYAAEMIFK--------RACDEKIELQD-----DTCGCMLKALSKEG 234
ND V K + + + + + K R E +E+ T ++KA K G
Sbjct: 373 NDGV--KPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVG 430
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI------- 287
+ A+++ + ++GI + ++ LCKE + +E LL +RGYI
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYG 490
Query: 288 ----------------------------PCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
P + + C GK + E + +
Sbjct: 491 TLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GLL D +S++ YC +++KA + + K D T ++LL+GL K+G E+A
Sbjct: 551 GLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F+ + + V + ++ ++S C K+L++A EM + +PD TY +I+
Sbjct: 611 LNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670
Query: 440 M 440
M
Sbjct: 671 M 671
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/414 (19%), Positives = 172/414 (41%), Gaps = 50/414 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ + G +GLE+ +M+ P V N L+D + A L M
Sbjct: 314 NILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEN 373
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSS--VMYNLVIDFYSKKGDFG 129
DGV PN+ T ++ + LC+ K E V L++ +S V Y+ +I Y K GD
Sbjct: 374 DGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + + EM + + T ++ILD + K + + ++ ++
Sbjct: 434 GALEMMREM-GQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR-----------G 481
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
Y++ ++ T G ++ +E +V++A +++ +
Sbjct: 482 YIVDEV--------------------------TYGTLIMGYFREEKVEKAFEMWDEMKRI 515
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
IT + + + + LC + E ++ E G +P + + C +G+ ++
Sbjct: 516 KITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKA 575
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E + + D++ C+ L+ C +KA+ + + +D TY+ ++
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTMISA 634
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
KD +++EA + M+E ++ ++ +++ L +L +A DE+LK
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEA----DELLK 684
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 127/283 (44%), Gaps = 6/283 (2%)
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ--KLSDMGKTYAAEMIFKRACDEKIELQD 220
K V+ ++ M+ KL P + L+ N +I + +A +F + L
Sbjct: 146 KPHVALQVFQKMIRLKLKP-NLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDV 204
Query: 221 DTCGCMLKALSKEGRVKEAI-QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ EG++++A+ + ++SE + + Y + + K+ + +V LL
Sbjct: 205 KTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLL 264
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D+ G +P + + V C G KE +++ + +L D + L+ C+
Sbjct: 265 DMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAG 324
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
I + + L ++ LK DV TY+ L+DG F+ G EA ++ + M+ V + +
Sbjct: 325 SIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHN 384
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGFM 440
I + LC ++ + + E+++M G PD TY +I ++
Sbjct: 385 ISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 191/440 (43%), Gaps = 9/440 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S L++V++ + H G V + G P + L+ L + +I A
Sbjct: 104 GIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEA 163
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDF 121
L+ MV +G PN T+ + LC+ G + LL S + + + YN +ID
Sbjct: 164 LHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDC 223
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K A + +EM + ++P STY+SI+ G ++ + + ++ MV+ K++P
Sbjct: 224 LFKDRQVNEALNIFSEMI-AKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMP 282
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ ++ L G A + +E T ++ + EA +
Sbjct: 283 NVVIFTT--LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADK 340
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + +G Y +N CK + ++ L ++ +R +P + + + C
Sbjct: 341 VFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ ++ L ++ G + D L++Y C R +D+A+A+ IE + D+
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQ 460
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
+Y++++DG+ + G +E A +F + + ++ I+++ LC L +A K EM
Sbjct: 461 SYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520
Query: 421 LKMGHKPDEATYKQVISGFM 440
G PD+ TY + GF+
Sbjct: 521 NTDGCSPDDCTYNLITRGFL 540
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 155/347 (44%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D L++ ++ A ++ M+ G+SPN T++ + LC+ +++ V L
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271
Query: 105 LDSGIYSSVMYNLVI-----DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
++ + S +M N+VI D K+G A D ++ M R + P TY++++DG
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQ-RGVEPDVVTYTALMDGHC 330
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + +D++ MV K P + +I + + A +F+ C ++
Sbjct: 331 LRSEMDEADKVFDTMVRKGCAPN--VISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L GR+++AI ++H + G Y ++ LCK ++ +L+
Sbjct: 389 IVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK 448
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ P + + C G+ + +L S++ KGL D + + ++ C
Sbjct: 449 AIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQG 508
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +A L ++ S D TY+++ G ++ A+++ M
Sbjct: 509 LLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 8/256 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V+ M G P V + + L++ + I A L+ M + + PN T++ + L
Sbjct: 340 KVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399
Query: 93 CRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C G+ + L + S V Y +++D+ K A L + G NL P
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI-EGSNLAPD 458
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+Y+ ++DG R + E + + + K L P + +I L G A +
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTY--TIMINGLCLQGLLAEATKL 516
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F+ + D T + + + AIQ+ + RG + S V +L
Sbjct: 517 FREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSD 576
Query: 268 EHQPEEVCGLLRDVVE 283
+ + V +L + V+
Sbjct: 577 DGLDQSVKQILHEFVQ 592
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P ++ ++ + S + V L + G+ D + + ++ +C ++D ++
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCH 406
KI KL D AT+ L+ GL +G++ EA+ +FD M E + ++ ++ LC
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ R A++ M++ +P+ TY +I
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTII 221
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 189/429 (44%), Gaps = 12/429 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
L++ C + + +E + +M+ GF P CN +L L R N I A Y M R
Sbjct: 160 LLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRM 219
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAA 131
+ N +T++++ +LC+ GK + G L GI + V YN ++ +S +G A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
++EM + P TY+ IL + + ++ M E L+P + +
Sbjct: 280 RLIISEM-KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV--SYNIL 333
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I+ S+ G A + + T ++ L E +++ A + I E+GI
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y +N C+ ++ L +++ G P + + C K K +E +E
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L V+ KG+ D ++LM+ +C+ +D+A +L +++ + + D TY+ L+ GL
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+G+ EEA + MK + S+ ++S + + A DEML +G P
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLL 573
Query: 431 TYKQVISGF 439
TY ++ G
Sbjct: 574 TYNALLKGL 582
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 197/441 (44%), Gaps = 49/441 (11%)
Query: 10 SQSDALSLVLDCYSHKGLF-----MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
SQ L+ V C G + ++ E++ M G P VS N LL L ++ E++
Sbjct: 174 SQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQ 233
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVI 119
+ L +++ G+ N FT+++ Q LCR G + +LDS I V YN +I
Sbjct: 234 ESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLI 293
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
K + A L+++ NG L P TY++++DG + + +++I+ + K
Sbjct: 294 CGLCKNSNVVEAEKYLHKLVNG-GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGF 352
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P F + +I L + A +F A + ++ ++K L +EG + +A
Sbjct: 353 VPDEFTYCS--LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQA 410
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+Q+ + +SE G + Y +N LCK + L+ D + +GY+P
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVP----------- 459
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
D F ++L++ YC +++ I + K+ + D
Sbjct: 460 ------------------------DVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
V TY+ +L+GL K + E+ + F+ M E V + ++ I+ LC ++ +A+ D
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555
Query: 419 EMLKMGHKPDEATYKQVISGF 439
E+L G PD ++ +ISGF
Sbjct: 556 EILNKGITPDTVSFATIISGF 576
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 181/424 (42%), Gaps = 44/424 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + ++V+ M Y P+V + NA+++ L + A ++ M G+ P+
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+T+++ + CR+ + L LL++ + ++V Y V+ + ++ A++ N
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + P ST++ +L + + + S+R++ +++K + F
Sbjct: 206 DMLR-IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLF------------ 252
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
T ++ L ++G + A+ + + G+T
Sbjct: 253 -------------------------TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVV 287
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + LCK E L +V G P + + C G + E++L
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGA 347
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ KG + D F SL+ C N +ID+A+AL V Y++L+ GL ++G +
Sbjct: 348 ICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLI 407
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A+++ + M E S ++ +V++ LC + + A ++ + G+ PD T+ +
Sbjct: 408 LQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTL 467
Query: 436 ISGF 439
I G+
Sbjct: 468 IDGY 471
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 147/374 (39%), Gaps = 57/374 (15%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+ L ++ I A + M +G S + +T++LV LC+ G
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 102 LGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L++ I + +N +ID Y K+ LN+M + +TP TY+S+L+
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWS-HGVTPDVITYNSVLN 504
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K E MVEK +P + + + L GK A + ++ I
Sbjct: 505 GLSKAVKNEDLMETFETMVEKGCVPNKITY--NILTESLCKAGKVNEALDLVDEILNKGI 562
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GITVRDSDYYAFVNVLCKE---HQPE 272
+ ++ + G +K A Q++ + E+ ++ + Y +N ++ H E
Sbjct: 563 TPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGE 622
Query: 273 EV--------CG------------------------LLRDVVERGYIPCAMELSRFVASQ 300
++ C L +++E+G+IP R +
Sbjct: 623 KLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI--ALHIKIEKL--KG 356
C + + E +++ ++ G+ + E S + DK + A I +E L +
Sbjct: 683 CVQHRVHEAVDIIHFMVHNGI---------VPEVVNSISEADKKVVAAPKIVVEDLLKRS 733
Query: 357 SLDVATYDVLLDGL 370
+ Y++L DG+
Sbjct: 734 CITYYAYELLYDGI 747
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 208/436 (47%), Gaps = 9/436 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S L++ Y +G E +R+++ G +++ACN+LL L + + LA +
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 345
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSK 124
Y +VR GV N +T +++ LC++ K E L + G++ V+ YN +I+ Y +
Sbjct: 346 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 405
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
+G AF+ ++ M +G+ L P TY++I++G + K + ++ M++ + P
Sbjct: 406 QGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT- 463
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + ++ + AE IF + + + ++ LSK G + +A++ +
Sbjct: 464 -ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ + Y + C+ E + +++E+G + + + C +
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
E +EL + + ++G+ D + ++L+ Y + ++KA+ L + + DV TY+
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+DG K ME+ +++ M ++ + S+ I+++ C++ + +A + DEM++
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702
Query: 424 GHKPDEATYKQVISGF 439
G + T ++ G+
Sbjct: 703 GFEATIITCNTIVKGY 718
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 193/453 (42%), Gaps = 44/453 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ Y +GL + E+ M G P V NA+++ L + + A + M++ G
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 78 VSPNKFTWSLVAQILCRSGK----------------------FEVVLGLL---------- 105
+SP+ T++++ CR+ F ++GLL
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 106 -------DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++G+ +V+Y ++I + + G A +EM + TY++IL+G
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCXLDVVTYNTILNG 577
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + +D + M E+ + P + +I G A +F+ ++
Sbjct: 578 LCKEKMLSEADELFTEMTERGVFPDFYTFTT--LINGYXKDGNMNKAVTLFEMMIQRNLK 635
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ K +++ ++++ + R I Y +N C E L
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++VE+G+ + + V C G + +E LS +L KG++ D ++L+ +
Sbjct: 696 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 755
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSS 396
+D+A AL K+E DV TY+V+L+G + GRM+EA I M E V S+
Sbjct: 756 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 815
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ +++ L++A + HDEML+ G PD+
Sbjct: 816 YTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 17/416 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++ M+ P++ N LLD L+R ++ A L+ M+ D S + +++++ L
Sbjct: 31 ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML-DRRSHDVISFNILVTGL 89
Query: 93 CRSGKFEVVLGLL----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
CR+GK E L D + + Y+++ID K A + L M R +P
Sbjct: 90 CRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESM-KARGCSPDV 148
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+ ++DG + K + ++ M++ +P L + ++ L + A +
Sbjct: 149 ITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN--LVTYNSLLHGLCRARRVSDALALM 206
Query: 209 K----RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ R C + T G ++ L K GRVK+A + + ++G T Y +N
Sbjct: 207 RDMTCRGCTPNVV----TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK Q +E LLR V G P + S + C + E LL V +G D
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S+L++ C ++D+A L+ + DV TY L+DGL K GR++EA +
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + S+ ++ ++ LC L L +A++ +EM + P TY +I G
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 438
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 183/413 (44%), Gaps = 21/413 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR +G P V N+L+D L + NE A L+ M SP+ T++ + L R+GK
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 98 FEVVLGL----LDSGIYSSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFST 150
E + L LD + + +N+++ + G A F ++++ C +P T
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRC-----SPNVIT 115
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
YS ++DG + + + ++ M + P + ++ L K AA + +
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPD--VITYTILVDGLCKESKVAAAWEVLRE 173
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
D T +L L + RV +A+ + ++ RG T Y ++ LCK +
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ C +L D++++G P M + + C + E LL + G+ D SS
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK--- 387
++ C + ++D+A L + ++ DV Y L+DGL K G+++EA +++ M
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 388 -ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ VV+ S+ + LC + +A M++MG P TY +I G
Sbjct: 354 CDADVVTYSTL---IDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 158/399 (39%), Gaps = 49/399 (12%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++S + R D ++ +++D + EV R M G VP + N+LL L
Sbjct: 135 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC 194
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM 114
R + A L M G +PN T+ + LC+ G+ + ++ ++D G +M
Sbjct: 195 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 254
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN++I+ K + L +G + P TYSS++ G R + + + R++ L
Sbjct: 255 IYNMLINGLCKADQVDESIALLRRAVSG-GIKPDVVTYSSVIYGLCRSNRLDEACRLL-L 312
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
V+ + P + Y+ ++ L K
Sbjct: 313 YVKSRGCPPDVI---------------LYST---------------------LIDGLCKA 336
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V EA +Y +++ G Y ++ LCK + +E LL +V G P M
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 396
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C E EL+ + + + L+ C ++D A AL E
Sbjct: 397 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA-ALDYFQEM 455
Query: 354 LKGSL--DVATYDVLLDGLFKDGRMEEAVR-IFDYMKEL 389
+ + D TY +LL+GL K + E + D M +L
Sbjct: 456 IDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQL 494
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 172/418 (41%), Gaps = 44/418 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D +E+ M+ G P V L+D L +++++ A + M+
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G PN T++ + LCR+ + L L+
Sbjct: 177 AGCVPNLVTYNSLLHGLCRARRVSDALALMR----------------------------- 207
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+ C G TP TY +++DG + + + + ++ M++K P + + +I L
Sbjct: 208 DMTCRG--CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY--NMLINGL 263
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ + + +RA I+ T ++ L + R+ EA ++ + RG
Sbjct: 264 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 323
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y ++ LCK + +E L + G + S + C G+ E LL+
Sbjct: 324 ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 383
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ G + +SL++ C +D+AI L ++E+ + TY++L+ G+ + R
Sbjct: 384 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 443
Query: 376 MEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNH-------DEMLKMGHK 426
++ A DY +E+ + + ++ L+ L+K+ H D+M+++G++
Sbjct: 444 VDSAA--LDYFQEM--IDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 497
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 195/429 (45%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G V + G+ P N L+ L + E++ + + +
Sbjct: 47 TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKV 106
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
V G + ++ + LC+ G+ + LL S + VMYN +ID K
Sbjct: 107 VAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+D +EM + R + P TY++++ G + + ++ M+ K + P ++
Sbjct: 167 NEAYDLYSEM-DARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIY-- 223
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L G A+ + E I+ T ++ G V+ A QI+H + +
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y +N LCK + +E LLR+++ + +P + + + C G+
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L++ + +G D +SL++ C N+ +DKA AL +K+++ + TY L+D
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403
Query: 369 GLFKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR++ A +F + + + + ++ +++S LC +A+ +M G P
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463
Query: 428 DEATYKQVI 436
+ T++ +I
Sbjct: 464 NAVTFEIII 472
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 14/364 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+++ RM+ P V N ++D L + + A LY M G+ P+ T++ +
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C G+ LLD I ++ +YN++I+ K+G+ A + L M +
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTK-EGIK 252
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQKLSDMGKTY 202
PG TYS+++DG + + + +I MV+ + P + + N K D
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 312
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
EM+ K + + T ++ L K GR+ A+ + + + RG Y + +
Sbjct: 313 LREMLHKNMVPDTV-----TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCK ++ L + ERG P + + C G+ K +EL +L KG
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+D + + ++ C D+A+A+ K+E + T+++++ LF+ ++A ++
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487
Query: 383 FDYM 386
M
Sbjct: 488 LHEM 491
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 138/316 (43%), Gaps = 43/316 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G + + +M G P V + L+D E++ A ++ AMV+
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGA 130
GV+PN ++++++ LC+ + + + LL ++ +V YN +ID K G +
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + +NEM + R TY+S+LD + + + + + M E+ + P +
Sbjct: 344 ALNLMNEM-HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY------ 396
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
TY A ++ L K GR+K A +++ + +G
Sbjct: 397 ----------TYTA---------------------LIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ LCKE +E + + + G IP A+ + S K + + E
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485
Query: 311 ELLSAVLDKGLLLDSF 326
+LL ++ KGLL+ F
Sbjct: 486 KLLHEMIAKGLLVLDF 501
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 168/421 (39%), Gaps = 50/421 (11%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
++ + + + M V G N L++ ++ + + G +++ G P+ T +
Sbjct: 26 YLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNT 85
Query: 88 VAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + LC G+ + L D + V Y +++ K G+ A +L M R
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAV-KLLRMIEDR 144
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P Y++I+DG + D ++ + D+
Sbjct: 145 STRPNVVMYNTIIDGLCK----------------------------DKLVNEAYDLYSEM 176
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A IF A T ++ G++ A + + + I Y +
Sbjct: 177 DARGIFPDAI---------TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILI 227
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N LCKE +E LL + + G P + S + C G+ + +++ A++ G+
Sbjct: 228 NALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN 287
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ + + ++ C +++D+A+ L ++ D TY+ L+DGL K GR+ A+ +
Sbjct: 288 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 347
Query: 383 FDYM----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ M + VV+ +S ++ LC + L KA +M + G +P TY +I G
Sbjct: 348 MNEMHHRGQPADVVTYTS---LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404
Query: 439 F 439
Sbjct: 405 L 405
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L +L+K + AI + + +GI +N C Q +L +++ G
Sbjct: 16 ILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLG 75
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P + L+ + C KG+ K+ V+ +G +D +L+ C + A+
Sbjct: 76 YQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAV 135
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L IE +V Y+ ++DGL KD + EA ++ M + + ++ ++
Sbjct: 136 KLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGF 195
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L +L A DEM+ P Y +I+
Sbjct: 196 CLLGQLMGAFSLLDEMILKNINPGVYIYNILINAL 230
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 202/421 (47%), Gaps = 22/421 (5%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+++ M+ + P + CN L+++L R + I LA + ++ GV PN +++++
Sbjct: 161 QIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILI 220
Query: 90 QILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C K + L ++ + +V YN ++D K+ A D L +M + L
Sbjct: 221 YGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDM-KSKGL 279
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY+ ++ G R + + +++ +M LLP + + ++ + GK A
Sbjct: 280 SPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTY--NMLVNGFCNDGKIDEA 337
Query: 205 EMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISE---RGITVRDSDYY 259
I R EK+ + D T ++ S + +++ ++Y LI E +G+ Y
Sbjct: 338 FRI--RDEMEKMNVLPDVVTYNTLIDGCS---QWRDSSEVYSLIEEMDKKGVKCNAVTYN 392
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ +CK+ E L + E G P + + + + C GK + ++ + K
Sbjct: 393 IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSK 452
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL +D++ ++++ C +++D+A L K LD +Y +L+ G FKD + + A
Sbjct: 453 GLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRA 512
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++D MKE +++ S+ ++ V+ LC +++ +A+ +EML+ G PDE TY +I G
Sbjct: 513 LNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHG 572
Query: 439 F 439
F
Sbjct: 573 F 573
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 213/478 (44%), Gaps = 52/478 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G +++ ++++ Y + D L+ M +G VP + N +LDAL ++ ++ A
Sbjct: 208 GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA 267
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
L M G+SPNK T++++ CR G + +++ ++++ YN++++
Sbjct: 268 RDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNG 327
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY-EKTEVSDRIVGLMVEKKLL 180
+ G AF R+ + N+ P TY++++DG ++ + +EV I + +KK +
Sbjct: 328 FCNDGKIDEAF-RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM--DKKGV 384
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ ++ N +++ + G A + + + T ++ A K G++ +A
Sbjct: 385 KCNAVTYN-IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAF 443
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI------------- 287
++ ++ +G+ + ++ LC E + +E LL +RGYI
Sbjct: 444 RMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGY 503
Query: 288 ----------------------PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
P + + + C K + + L+ +L+ GL+ D
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ ++ +C ++KA H ++ + DV T ++LL GL ++G +E+A+++F+
Sbjct: 564 TTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNT 623
Query: 386 M----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ K++ VV ++ ++S LC + A EM PD+ TYK +I+
Sbjct: 624 LVSKGKDIDVV---TYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 188/472 (39%), Gaps = 68/472 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ + + G + + M +P V N L+D + + L M +
Sbjct: 322 NMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDK 381
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGA 130
GV N T++++ + +C+ G LD +G+ V YN +I Y K G G
Sbjct: 382 KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGK 441
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL----S 186
AF ++EM + L T ++IL L VEKKL + L S
Sbjct: 442 AFRMMDEM-TSKGLKIDTWTLNTILHC---------------LCVEKKLDEAYNLLCSAS 485
Query: 187 GNDYVIQKLSDMGKTYAAEMI--FK-RACDEKIELQDD-----------TCGCMLKALSK 232
Y++ ++S Y ++ FK D + L D+ T ++ L +
Sbjct: 486 KRGYILDEVS-----YGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQ 540
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+V +AI + + E G+ ++ Y ++ C E E+ +++E + P
Sbjct: 541 SRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYT 600
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C +G ++ +L + ++ KG +D ++++ C + + A L ++E
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-------------------- 392
K D TY V++ L GR++EA M E +V
Sbjct: 661 AKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSE 720
Query: 393 ----SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
S ++ ++ LC+ + + AM E+ K G ++ TY ++ G +
Sbjct: 721 HFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLI 772
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 9/436 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + L++ Y +DGL V R+M G +P + + +L+ L R + R+A L
Sbjct: 143 STTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHL 202
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSK 124
+ +V G+ P+ + ++ V + LC F EV+ + SG SV YN+ I K
Sbjct: 203 FDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + + + + + L TY +++ G + E+ E + ++ M+E +P
Sbjct: 263 NQRVWEAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
N ++ L G +A + + + ++ ++ K+G++ EA +++
Sbjct: 322 AVSN--LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN 379
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +G+ D Y ++ CK + + L + E G S ++ C G
Sbjct: 380 NMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLG 439
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K + + L ++ GL + +SL+ YC ++ A L+ ++ S + T+
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFT 499
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ GL RM EA ++F M E V+ + ++ +++ C +A + DEM++
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559
Query: 424 GHKPDEATYKQVISGF 439
G PD TY+ +ISG
Sbjct: 560 GLVPDTYTYRPLISGL 575
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 215/535 (40%), Gaps = 113/535 (21%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A+S ++D KG ++ ++ +G P++ NAL++++ + ++ A L+ M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI------YSS----------- 112
G+ PN T+S++ C+ GK +V L L + GI YSS
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 113 -------------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
V+Y +I Y K+G+ AF +EM G+ ++P T+++
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM-TGKGISPNTYTFTA 500
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPK----------HFLSGN--------DYVIQK- 194
++ G + ++++ G MVE ++P H GN D +++K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 195 --------------LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
L G+ A E+ +L + +L KEGR+ +A+
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620
Query: 241 QIYHLISERGIT-------------VRDSDYYAFVNVLCKEH----QPEEVC-------- 275
+ RG+ +R D + +++L + H +P+ V
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDAN 680
Query: 276 ----------GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
GL +V G +P + + + C G + E L +L L +
Sbjct: 681 AKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 740
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++Y S I+KAI LH + L+G L + TY++L+ G K GR++EA +
Sbjct: 741 NTYACFLDYLTSEGNIEKAIQLHDVL--LEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 798
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M + + S+ ++ C +L++A+K + ML G PD Y +I G
Sbjct: 799 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 853
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 178/413 (43%), Gaps = 40/413 (9%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F G E+ M +GFVP+ +A + L+D L ++ I A L + + GV+P+ F ++
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 88 VAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ +C+ GK + L ++ KG F P
Sbjct: 361 LINSMCKDGKLDEAESLFNN--------------MGHKGLF-----------------PN 389
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++D + K +V+ +G M E + K + +I +GK AA+ +
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGI--KATVYPYSSLISGHCKLGKLRAAKSL 447
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F ++ ++ KEG + A ++YH ++ +GI+ + A ++ LC
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
++ E L ++VE IP + + + C +G ELL +++KGL+ D++
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
L+ CS ++ +A ++ + L+ + LL G K+GR+++A+ D +
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL---DACR 624
Query: 388 EL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
E+ + + +++ + ++ R + +M G +PD Y +I
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMI 677
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 176/473 (37%), Gaps = 107/473 (22%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P V +L+ ++ E+ A LY M G+SPN +T++ + LC + +
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510
Query: 98 FEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L + I + V YN++I+ + K+G+ AF+ L+EM + L P TY
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE-KGLVPDTYTYR 569
Query: 153 SILDG----ARRYEKTEVSDRIVGL------MVEKKLLPKHFLSGN-DYVIQKLSDM-GK 200
++ G R E E + + G M LL + G D + +M G+
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGR 629
Query: 201 TYAAEMI---------------------FKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
A +++ K+ D+ + + M+ A +K G +K A
Sbjct: 630 GVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMA 689
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCK--------------------EHQPEEVCGL-- 277
++ ++ G Y A +N LCK +Q C L
Sbjct: 690 FGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 749
Query: 278 ------------LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
L DV+ G++ + + + C G+ +E E+L ++D G+ D
Sbjct: 750 LTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 809
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
S+++ YC + +AI L + + D Y+ L+ G
Sbjct: 810 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG---------------- 853
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
C EL KA + D+M++ G KP+ ATY +I G
Sbjct: 854 ------------------CCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGD 127
M+ GV+ + +S++ + R ++ LL D G+ +V+Y +ID +K G+
Sbjct: 626 MLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGN 685
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
AF + M + P TY+++++G + +GLM + +LL + L+
Sbjct: 686 LKMAFGLWDIMVS-EGCLPNVVTYTALINGLCK----------IGLMDKAELLCREMLAS 734
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRA---CDEKIELQDD----------TCGCMLKALSKEG 234
N Q TYA + + + ++ I+L D T +++ K G
Sbjct: 735 NSLPNQN------TYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 788
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R++EA ++ + + GI+ Y + C+ +E L ++ RG P + +
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 848
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ C G+ + EL ++ +G+ + +SL+ C
Sbjct: 849 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 195/435 (44%), Gaps = 19/435 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+ G + LE+ R M G +P L+D RQ + M
Sbjct: 271 SVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT 330
Query: 76 DGVSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ P+ ++ + + G F+V + I ++ Y +I K GD
Sbjct: 331 MGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEK 390
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D +EM + P TY+ +++G Y K + ++ L++E K K L+ N Y
Sbjct: 391 AEDLFSEM-TMMGIKPDIQTYNCLIEG---YYKVQNMEKAYELLIEIK---KENLTANAY 443
Query: 191 ----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
++ L G A +F+ ++ ++K L KEGR +EAI+I ++
Sbjct: 444 MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM 503
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++G++ Y + CK + EE L +++ +G P F+ C G+
Sbjct: 504 KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEM 563
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDV 365
+ E +LD G+ + C+ L++ YC + KA A + +G L DV T+ V
Sbjct: 564 QAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFA-KFRCMLDQGVLPDVQTHSV 622
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ GL K+G+++EA+ +F + + +V ++ ++S LC +L+ A + HD+M K G
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682
Query: 425 HKPDEATYKQVISGF 439
P+ TY +I+G
Sbjct: 683 INPNIVTYNALINGL 697
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 182/396 (45%), Gaps = 16/396 (4%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---- 105
C A+++ L ++ A+ L+ M+ G+ PN ++ + + L + G+FE + +L
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504
Query: 106 DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
D G+ V YN VI + K G L EM + L P TY + + G R +
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI-AKGLKPNVYTYGAFIHGYCRAGEM 563
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRACDEKIELQD 220
+ ++R M++ + P ND + L D G T A F+ D+ +
Sbjct: 564 QAAERSFIEMLDSGIAP------NDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDV 617
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ LSK G+++EA+ ++ + ++G+ Y + ++ LCKE + L D
Sbjct: 618 QTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDD 677
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ ++G P + + + C G+ + EL + +KGL +S S+++ YC +
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV 400
+ +A L ++ + D Y L+DG K G E+A+ +F M E + S+ +F +
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNAL 797
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ L +L +A + ++M+ P+ TY +I
Sbjct: 798 IDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 197/464 (42%), Gaps = 45/464 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ H G E+++ M +G P + ++ L ++ A + G M G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+SP+ F ++ V C++GK E ++ ++ G+ +V Y I Y + G+ AA
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
EM + + P + ++DG + T + M+++ +LP + + +I
Sbjct: 568 RSFIEMLDS-GIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD--VQTHSVLI 624
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
LS GK A +F D+ + T ++ L KEG +K A +++ + ++GI
Sbjct: 625 HGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGIN 684
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y A +N LCK + + L + E+G ++ S +A C E +L
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQL 744
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ G+ DSF +L++ C +KA++L + + + +G ++ L+DG FK
Sbjct: 745 FHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE-EGIASTPAFNALIDGFFK 803
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA------------MKN--- 416
G++ EA ++ + M + + + ++ I++ C + +++A M N
Sbjct: 804 LGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLT 863
Query: 417 --------------------HDEMLKMGHKPDEATYKQVISGFM 440
DEM+ G KPD+ + ++ +
Sbjct: 864 YTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 177/432 (40%), Gaps = 47/432 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++D Y KG + + V+ + F+ ++ CN+L L + N + L +Y M+
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFG 129
+ P+ +T++ + CR GK E V+ + + G I + V Y++VI + GD
Sbjct: 226 -GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + M N + L P Y++++DG R +++ ++ M L P H
Sbjct: 285 EALELKRSMAN-KGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV----- 338
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
Y A ++ K+ + A Q+ + R
Sbjct: 339 -----------AYTA---------------------LINGFVKQSDIGGAFQVKEEMFAR 366
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
I + YYA ++ LCK E+ L ++ G P + + ++
Sbjct: 367 KIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKA 426
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
ELL + + L +++ C +++ C + +A L ++ ++ Y ++ G
Sbjct: 427 YELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKG 486
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
L K+GR EEA++I MK+ + +S F V+ C ++ + EM+ G KP
Sbjct: 487 LVKEGRFEEAIKILGVMKD-QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP 545
Query: 428 DEATYKQVISGF 439
+ TY I G+
Sbjct: 546 NVYTYGAFIHGY 557
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 172/376 (45%), Gaps = 9/376 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ S G + + V+ + G VP V +L+ L ++ +++ A L+ M +
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCK 680
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
G++PN T++ + LC+ G+ E+ G+ + G+ +SV Y+ +I Y K +
Sbjct: 681 KGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTE 740
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF + M + P Y +++DG + TE + + MVE+ + +
Sbjct: 741 AFQLFHGM-KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNA--- 796
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +GK A + + D I T +++ G +KEA Q++ + +R
Sbjct: 797 LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y + ++ + + E+ L ++V RG P + S V + +G W +
Sbjct: 857 VMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L+ +L +G+ + + L++ C + + + + + ++EK L +AT L+
Sbjct: 917 KLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCF 976
Query: 371 FKDGRMEEAVRIFDYM 386
+ GR +EA+R+ + M
Sbjct: 977 HRAGRTDEALRVLESM 992
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 195/489 (39%), Gaps = 76/489 (15%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G F + +++ +M+ G P V N ++ + ++ M+ G+ PN +T
Sbjct: 490 EGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYT 549
Query: 85 WSLVAQILCRSGKFEVV----LGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ CR+G+ + + +LDSGI + V+ +ID Y K G+ AF + M
Sbjct: 550 YGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------------- 184
+ + + P T+S ++ G + K + + + +++K L+P F
Sbjct: 610 D-QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668
Query: 185 --------------LSGN----DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
++ N + +I L +G+ A +F ++ + T +
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ K + EA Q++H + G+ Y A ++ CK E+ L +VE G
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG- 787
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
I + + GK E +L+ ++D + + + L+EY+C+ I +A
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD---------------------- 384
L ++++K +V TY LL G + GR E +FD
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907
Query: 385 ----YMKELKVVS----------SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
++K LK+V + + I++ LC L + +K DE+ K G K A
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967
Query: 431 TYKQVISGF 439
T ++ F
Sbjct: 968 TCGTLVCCF 976
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 178/426 (41%), Gaps = 61/426 (14%)
Query: 59 RQNEI----RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----- 109
+QN++ RL R S N T+S+++ ILC SG F +L+ I
Sbjct: 80 KQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNP 139
Query: 110 -----------YSSV----------MYNLVIDFYSKKGDFGAAFD-----RLNEMCNGRN 143
Y + ++ ++ID Y KKG A + NE G
Sbjct: 140 HVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVG-- 197
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L S +L G R +V ++G +V P + N +I +GK
Sbjct: 198 LACCNSLSKDLLKGNRVELFWKVYKGMLGAIV-----PDVYTYTN--LINAYCRVGKVEE 250
Query: 204 AEMIF----KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ + ++ C + T ++ L + G V EA+++ ++ +G+ + Y
Sbjct: 251 GKHVLFDMEEKGCIPNLV----TYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYA 306
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME----LSRFVASQCGKGKWKEVEELLSA 315
++ C++ + E +L ++ G P + ++ FV G ++ EE+ +
Sbjct: 307 TLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFA- 365
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ + L++F +L+ C ++KA L ++ + D+ TY+ L++G +K
Sbjct: 366 ---RKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQN 422
Query: 376 MEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
ME+A + +K+ + +++ +V+ LCH +L +A + EM+ G KP+ Y
Sbjct: 423 MEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTT 482
Query: 435 VISGFM 440
++ G +
Sbjct: 483 IVKGLV 488
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 145/382 (37%), Gaps = 70/382 (18%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S S ++ Y + +++ M++ G P AL+D +
Sbjct: 716 KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVID 120
A L+ MV +G++ +L+ + GK +++V ++D+ I + V Y ++I+
Sbjct: 776 ALSLFLGMVEEGIASTPAFNALIDGFF-KLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
++ G+ A EM RN+ P TY+S+L G R
Sbjct: 835 YHCTVGNIKEAEQLFMEM-QKRNVMPNVLTYTSLLHGYNR-------------------- 873
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+G+ +F I+ D M+ A KEG +A+
Sbjct: 874 -----------------IGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + G+ V + Y ++ LCK + EV +L +V ++G S+ +
Sbjct: 917 KLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQG--------SKLSLAT 968
Query: 301 CGK--------GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
CG G+ E +L +++ L L F + NR L I +E
Sbjct: 969 CGTLVCCFHRAGRTDEALRVLESMVRSFLNLLEFSVRN------GNRGKSNGEMLSIILE 1022
Query: 353 KLKG-SLDVATYDVLLDGLFKD 373
K S D+ T DV LFK+
Sbjct: 1023 GRKSLSGDIQTLDV---DLFKE 1041
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 45/403 (11%)
Query: 79 SPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFD 133
SPN++T+ +V + C+ GK +++ +LD+GI + YN++ID Y+KKG A +
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA-N 63
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
RL E L P TY+S+L+ + K + + + M EK P +I
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST--IIS 121
Query: 194 KLSDMGK-TYAAEMIF----KRAC----------------DEKIE--------------L 218
L GK T A EM+F +R C DE IE +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 219 QDD-TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D+ T +L L + G+V EA Q + + RG + Y ++ L KE + +E L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+DV+ +GY+P + + + K E EE+ ++ G + S ++ +C
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
+++D A + ++ K+ DV TY++LLDGL K +++A +F M + S
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +V++ LC ++ A D M++ PD T+ ++ G
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 187/429 (43%), Gaps = 8/429 (1%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+VL + +G DG +++ M G P N L+D ++ + A+ LY MV
Sbjct: 13 VVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV 72
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ P+ +T++ + C+ K + + L + G V+ Y+ +I K G A
Sbjct: 73 GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEA 132
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L R + Y+++++G + E E + +++ M K +P + + +
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY--NTI 190
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ L MGK A+ F +L AL KEG+ EA++++ + +G
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY 250
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + + L ++ +E + + +V G P S ++ C K + +
Sbjct: 251 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK 310
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L + G + D + L++ C +DKA L + + D+ +Y V+L+GL
Sbjct: 311 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 370
Query: 372 KDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K ++ +A +FD M E K+V +F I++ LC +L +A D+M G PD
Sbjct: 371 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYV 430
Query: 431 TYKQVISGF 439
Y +++G
Sbjct: 431 AYNTLMNGL 439
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 172/377 (45%), Gaps = 9/377 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y+ KG + +Y M G P++ N+LL+A ++ +++ A L+ M
Sbjct: 47 NILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE 106
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDFG 129
G P+ T+S + LC++GK L +L + ++V YN +I+ K +
Sbjct: 107 KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIE 166
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A+ L EM + + P TY++IL G R K + + M + P + +
Sbjct: 167 RAYKLLEEMAS-KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD--VVAYN 223
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ L GKT A +FK + T +L L+++ + EA +++ +
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + Y ++ C+ + ++ +L ++ + G +P + + + C +
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL S ++D G D S ++ C ++ A L ++ + K DV T+++L+DG
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 403
Query: 370 LFKDGRMEEAVRIFDYM 386
L K G+++EA + D M
Sbjct: 404 LCKAGKLDEAKDLLDQM 420
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 8/294 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G+VP N +L L R ++ A + +M G SP+ ++ + L + GK
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234
Query: 98 FEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ + L I +V YN ++ ++K + A + +M P +TYS
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV-ASGCAPNGATYS 293
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L G R +K + + +++ M + +P + + ++ L A +F
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPD--VVTYNILLDGLCKTNLVDKAHELFSTMV 351
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + +L L K +V +A ++ + ER + + ++ LCK + +
Sbjct: 352 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 411
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
E LL + G P + + + +G+ + + L A+ +KG L D F
Sbjct: 412 EAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 194/432 (44%), Gaps = 15/432 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H + + + M G+ P N L+ L+ N+ A L M
Sbjct: 153 TLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRM 212
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
V G P+ FT+ V LC+ G ++ L LL + G + V+YN +ID K
Sbjct: 213 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHM 272
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AFD N+M + + P TY+S++ Y + + R++ M+E+K+ P + ++ N
Sbjct: 273 DDAFDLFNKM-ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINP-NVVTFN 330
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I + GK AE +F I+ T ++ R+ EA QI+ L+
Sbjct: 331 S-LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 389
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + EE L R++ +RG + + + + G
Sbjct: 390 KDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 449
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C +++KA+ + ++K K ++ TY+++++
Sbjct: 450 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIE 509
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS--FVIVVSRLCH--LKELRKAMKNHDEMLKMG 424
G+ K G++E+ +F + LK V + + ++S C LKE A+ EM + G
Sbjct: 510 GMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADAL--FREMKEDG 566
Query: 425 HKPDEATYKQVI 436
PD Y +I
Sbjct: 567 TLPDSGCYNTLI 578
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 174/411 (42%), Gaps = 29/411 (7%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + N+ + L M G+ N +T+S++ CR + + L +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT---------------PGFS 149
L G + Y + D LN C+G+ ++ P
Sbjct: 139 L--GKMMKLGY---------EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
T+++++ G + K + ++ MV + P F G V+ L G A + K
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT--VVNGLCKRGDIDLALSLLK 245
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ KIE ++ L K + +A +++ + +GI Y + ++ LC
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ + LL D++ER P + + + + +GK E E+L ++ + + + +
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
SL+ +C + ++D+A + + DV TY+ L+ G K R+EE + +F M +
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V ++ ++ ++ L + A K +M+ G PD TY ++ G
Sbjct: 426 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 7/254 (2%)
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
LS N KL D + EM+ R IE +L A++K + I +
Sbjct: 52 LSRNGLSELKLDDAVALFG-EMVKSRPFPSIIEFSK-----LLSAIAKMNKFDVVISLGE 105
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ GI Y +N C+ Q +L +++ GY P + LS + C
Sbjct: 106 QMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 165
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E L+ +++ G D+ ++L+ + + +A+AL ++ D+ TY
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKM 423
+++GL K G ++ A+ + M++ K+ ++ + ++ LC K + A ++M
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285
Query: 424 GHKPDEATYKQVIS 437
G KPD TY +IS
Sbjct: 286 GIKPDVFTYNSLIS 299
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E + ++ L ++V+ P +E S+ +++ K+ V L + + G+ + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
S L+ +C Q+ A+A+ K+ KL D+ T LL+G R+ EAV + D M
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E+ + +F ++ L + +A+ D M+ G +PD TY V++G
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 231
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 201/432 (46%), Gaps = 13/432 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S ++ + G D ++++ M G P V N L+ L + + A MV
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 308
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFG 129
+DGV+ T+S++ L + KF V+ L+ G + V+YN +ID Y K G+ G
Sbjct: 309 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 368
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSG 187
A +M + + + P T +SI+ G + + E ++ I+ M+ + + P F +
Sbjct: 369 DALRIRGDMVS-KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT- 426
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L + +A + + D ++ L KEG+ +A++++ +
Sbjct: 427 ---IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 483
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E+G A ++ LCK +E LL+ ++ERG++ + + ++ C +GK +
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +L ++ +G+ D+F + L+ C ++D+A+ L + + +V TY V++
Sbjct: 544 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603
Query: 368 DGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG K ++EE ++F + + + ++S + ++ C +A K HD+M G
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663
Query: 427 PDEATYKQVISG 438
P ATY +I G
Sbjct: 664 PTTATYSSLIHG 675
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 191/419 (45%), Gaps = 12/419 (2%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + + V+R + G P V C LL +L + NE+ + ++ M R GVSP+ + +S
Sbjct: 193 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFST 251
Query: 88 VAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC-NG 141
C+ GK E + L G+ +V+ YN +I K G+ AF +M +G
Sbjct: 252 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 311
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
N T TYS +++G + EK ++ ++ +EK P + + +I MG
Sbjct: 312 VNAT--LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY--NTLIDGYCKMGNL 367
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A I + I T +++ K G++++A I + RG ++ +
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LC + E LR+++ R P L+ V C +GK + EL +L+KG
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ ++L+ C + +A+ L K+ + LD TY+ L+ G K+G++EE +
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + + + ++ +++ +C + +L +A+ +E P+ TY +I G+
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 192/463 (41%), Gaps = 44/463 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y G D L + M G P N+++ + ++ A C+ M+ G
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNL--------VI 119
S N ++ + LC + +FE L L + G+ ++++ L +
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 120 DFYSK---KGDFGAAFDRLNEMCNG---------------RNLTPGFS----TYSSILDG 157
+ + + KG FGA N + +G + L GF TY++++ G
Sbjct: 477 ELWFRLLEKG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K E ++ G MV++ + P F + +I + +GK A ++ +
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTY--NLLIHGMCRIGKLDEAVNLWNECKSRDLV 593
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T G M+ K +++E +++ + + + + Y + C+ E L
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
D+ +G P S + C G+ ++ + L+ + +GLL + C ++L+ YC
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
Q+DK + + ++ + TY V++DG K G M+ A ++ M +V + +
Sbjct: 714 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 773
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ + C ++ + K D M + G DE TY ++ G+
Sbjct: 774 YNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQP---EEVCGLLRDVVERGYIP----CAMELSRFV- 297
+ E G+ V D ++V C + + G+ R + +G P C LS V
Sbjct: 167 VGESGVAVAAVDL--LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVK 224
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
A++ K W + + +G+ D + S+ + +C +++ AI L +EKL S
Sbjct: 225 ANELEKSYW------VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 278
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKN 416
+V TY+ L+ GL K G ++EA R + M + V ++ ++ ++++ L L++ +A
Sbjct: 279 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
E L+ G P+E Y +I G+
Sbjct: 339 LKETLEKGFTPNEVVYNTLIDGY 361
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 9/436 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + L++ Y +DGL V R+M G +P + + +L+ L R + R+A L
Sbjct: 143 STTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHL 202
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSK 124
+ +V G+ P+ + ++ V + LC F EV+ + SG SV YN+ I K
Sbjct: 203 FDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + + + + + L TY +++ G + E+ E + ++ M+E +P
Sbjct: 263 NQRVWEAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
N ++ L G +A + + + ++ ++ K+G++ EA +++
Sbjct: 322 AVSN--LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN 379
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +G+ D Y ++ CK + + L + E G S ++ C G
Sbjct: 380 NMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLG 439
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K + + L ++ GL + +SL+ YC ++ A L+ ++ S + T+
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFT 499
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ GL RM EA ++F M E V+ + ++ +++ C +A + DEM++
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559
Query: 424 GHKPDEATYKQVISGF 439
G PD TY+ +ISG
Sbjct: 560 GLVPDTYTYRPLISGL 575
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 194/441 (43%), Gaps = 22/441 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A+S ++D KG ++ ++ +G P++ NAL++++ + ++ A L+ M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
G+ PN T+S++ C+ GK +V L L + GI ++V Y+ +I + K G
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
AA +EM NG L P Y+S++ G + + + R+ M K + P +
Sbjct: 442 RAAKSLFDEMIANG--LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF- 498
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L + A +F + + + T +++ KEG A ++ +
Sbjct: 499 -TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE--------RGYIPCAMELSRFVAS 299
E+G+ Y ++ LC + E + D+ G +P + + +
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL- 358
C G + E L +L L + + ++Y S I+KAI LH + L+G L
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL--LEGFLA 675
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
+ TY++L+ G K GR++EA + M + + S+ ++ C +L++A+K
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735
Query: 418 DEMLKMGHKPDEATYKQVISG 438
+ ML G PD Y +I G
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYG 756
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 187/421 (44%), Gaps = 43/421 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F G E+ M +GFVP+ +A + L+D L ++ I A L + + GV+P+ F ++
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 88 VAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ +C+ GK + L ++ KG F P
Sbjct: 361 LINSMCKDGKLDEAESLFNN--------------MGHKGLF-----------------PN 389
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++D + K +V+ +G M E + K + +I +GK AA+ +
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGI--KATVYPYSSLISGHCKLGKLRAAKSL 447
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F ++ ++ KEG + A ++YH ++ +GI+ + A ++ LC
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
++ E L ++VE IP + + + C +G ELL +++KGL+ D++
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 328 CSSLMEYYCSNRQIDKAIAL-------HIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEA 379
L+ CS ++ +A K+ +++G L +V TY L++GL K G M++A
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKA 627
Query: 380 -VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + + + + +++ + L + KA++ HD +L+ G + TY +I G
Sbjct: 628 ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRG 686
Query: 439 F 439
F
Sbjct: 687 F 687
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 140/350 (40%), Gaps = 58/350 (16%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P V +L+ ++ E+ A LY M G+SPN +T++ + LC + +
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510
Query: 98 FEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L + I + V YN++I+ + K+G+ AF+ L+EM + L P TY
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE-KGLVPDTYTYR 569
Query: 153 SILDG----ARRYEKTEVSDRI-----------------------------VGLMVEKKL 179
++ G R E E + + +GLM + +L
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAEL 629
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA---CDEKIELQDD----------TCGCM 226
L + L+ N Q TYA + + + ++ I+L D T +
Sbjct: 630 LCREMLASNSLPNQN------TYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNIL 683
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
++ K GR++EA ++ + + GI+ Y + C+ +E L ++ RG
Sbjct: 684 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 743
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
P + + + C G+ + EL ++ +G+ + +SL+ C
Sbjct: 744 NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/346 (17%), Positives = 126/346 (36%), Gaps = 44/346 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y +G + +Y M G P AL+ L N + A+ L+G MV V PN
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLN 136
+ T++++ + C+ G FE++ +++ G+ + Y +I G A + +N
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 137 EMCNGRN-------LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH------ 183
++ + P TY+++++G + + ++ + M+ LP
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 649
Query: 184 -----------------------FLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
FL+ + +I+ +G+ A + D I
Sbjct: 650 LDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS 709
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ ++ + G +KEAI+++ + RG+ Y + C + + L
Sbjct: 710 PDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 769
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
D++ RG P + + C + S L+ LL
Sbjct: 770 RDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLNWCFLL 815
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 188/433 (43%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P ++ N L+ L + +I L+ M
Sbjct: 96 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G PN T+ + LC+ G + LL S + V+Y +ID K
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ +EM + + ++P TY+S++ + + ++ MV K++P +
Sbjct: 216 TQAFNLFSEMIH-QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L GK A + +E T ++ + EA++++ +
Sbjct: 275 --VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC 332
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK + E+ L ++ + IP + S + C G+ ++
Sbjct: 333 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 392
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ +G + D L++Y C NR++D+AIAL IE D+ Y +++D
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 452
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A +F + + + ++ I+++ LC L +A K EM + G+ P
Sbjct: 453 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 512
Query: 428 DEATYKQVISGFM 440
+ TY + GF+
Sbjct: 513 NGCTYNLITRGFL 525
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 157/347 (45%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +++D+L + ++ A L+ M+ G+SP+ FT++ + LC +++ V L
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 256
Query: 105 LDSGIYSSVMYNLVI-----DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + S +M N+VI D K+G A D ++ M R + P TY++++DG
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVEPNVVTYNALMDGHC 315
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++ MV K P + +I + + A +F+ C +++
Sbjct: 316 LRSEMDEAVKVFDTMVCKGFAPD--VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 373
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L GR+++AI ++H + RG Y ++ LCK + +E LL+
Sbjct: 374 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 433
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ P + + C G+ + +L S + KGL + + + ++ C
Sbjct: 434 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 493
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +A L ++++ S + TY+++ G ++ +++ M
Sbjct: 494 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + ++ + S + V L + G+ + + + L+ +C +++ A ++
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCH 406
KI KL ++AT++ L+ GL +G++ E + +FD M E + ++ +++ LC
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ M + +PD Y +I
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSII 206
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 199/430 (46%), Gaps = 9/430 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++ Y G+ GLE + FVP V ACN LL+ L + N I +Y M R
Sbjct: 198 MLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRL 257
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAA 131
G+ N +T++++ +LCR G + V G L + G V YN++I+ Y KK A
Sbjct: 258 GIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDA 317
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F L ++ R + P +YS++++G + K + + ++ MV++ + P +S N +
Sbjct: 318 F-YLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPD-VVSYNTLI 375
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ GK + I + TC + + ++EG++ A+ + + GI
Sbjct: 376 SGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGI 435
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG-YIPCAMELSRFVASQCGKGKWKEVE 310
+ ++ Y + LCKE +P L + + G Y+P + S C +E
Sbjct: 436 KIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEAL 495
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L S + K + L+ +++ C ++ +A L ++ L D+ L++G
Sbjct: 496 ILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGY 555
Query: 371 FKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
++ +++AV + + KE +V + S+ +V C + + + M+ D+++K+G+ P+
Sbjct: 556 CEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNS 615
Query: 430 ATYKQVISGF 439
T K VI G
Sbjct: 616 LTCKYVIRGL 625
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 188/433 (43%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P ++ N L+ L + +I L+ M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G PN T+ + LC+ G + LL S + V+Y +ID K
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ +EM + + ++P TY+S++ + + ++ MV K++P +
Sbjct: 225 TQAFNLFSEMIH-QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L GK A + +E T ++ + EA++++ +
Sbjct: 284 --VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC 341
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK + E+ L ++ + IP + S + C G+ ++
Sbjct: 342 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 401
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ +G + D L++Y C NR++D+AIAL IE D+ Y +++D
Sbjct: 402 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 461
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A +F + + + ++ I+++ LC L +A K EM + G+ P
Sbjct: 462 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 521
Query: 428 DEATYKQVISGFM 440
+ TY + GF+
Sbjct: 522 NGCTYNLITRGFL 534
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 157/347 (45%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +++D+L + ++ A L+ M+ G+SP+ FT++ + LC +++ V L
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 265
Query: 105 LDSGIYSSVMYNLVI-----DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + S +M N+VI D K+G A D ++ M R + P TY++++DG
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVEPNVVTYNALMDGHC 324
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++ MV K P + +I + + A +F+ C +++
Sbjct: 325 LRSEMDEAVKVFDTMVCKGFAPD--VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 382
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L GR+++AI ++H + RG Y ++ LCK + +E LL+
Sbjct: 383 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 442
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ P + + C G+ + +L S + KGL + + + ++ C
Sbjct: 443 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 502
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +A L ++++ S + TY+++ G ++ +++ M
Sbjct: 503 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + ++ + S + V L + G+ + + + L+ +C +++ A ++
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCH 406
KI KL ++AT++ L+ GL +G++ E + +FD M E + ++ +++ LC
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ M + +PD Y +I
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSII 215
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 192/437 (43%), Gaps = 9/437 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + LS++++C+ H G V + G+ P L+ L + E++
Sbjct: 161 KGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKK 220
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVID 120
+ + +V G N+ ++ + LC+ G+ + LL S VMYN +ID
Sbjct: 221 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIID 280
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K A+D EM N R + P TYS+++ G + + ++ M K +
Sbjct: 281 GLCKDKLVNEAYDFYTEM-NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I L GK A+ + E ++ T ++ G V A
Sbjct: 340 PDVYTY--TILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
QI+H + + + Y +N LCK +E LLR+++ + +P + + +
Sbjct: 398 QIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ +L+ + +G D +SL++ C N+ +DKAIAL +K+++ +
Sbjct: 458 CKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNK 517
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY L+DGL K R++ A ++F + + + + ++ +++ LC L +A+ +
Sbjct: 518 YTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577
Query: 420 MLKMGHKPDEATYKQVI 436
M G PD T++ +I
Sbjct: 578 MEDNGCIPDAVTFEIII 594
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 14/364 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+++ RM+ P V N ++D L + + A Y M G+ P+ T+S +
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLIC 315
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C +G+ LL+ ++ Y ++ID K+G A + L M +
Sbjct: 316 GFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTK-EGVK 374
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSDMGKTY 202
P TYS+++DG + + +I MV+ ++ P + + N K D
Sbjct: 375 PNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNL 434
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
EM+ K + T ++ L K GR+ A+ + + RG Y + +
Sbjct: 435 LREMLHKNVVPNTV-----TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCK ++ L + ERG P + + C + K ++L +L KG
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+D + + ++ C +D+A+A+ K+E D T+++++ LF+ ++A ++
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKL 609
Query: 383 FDYM 386
M
Sbjct: 610 LHEM 613
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 22/309 (7%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G M + M + P V L+DAL ++ +++ A L G M ++GV PN T+
Sbjct: 321 GQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTY 380
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCN 140
S + C G+ ++ ++ + + SV YN++I+ K A + L EM +
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH 440
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL-----PKHFLSGNDYV--IQ 193
+N+ P TY+S++DG + S RI + K L P ++ + +
Sbjct: 441 -KNVVPNTVTYNSLIDGLCK------SGRITSALDLMKELHHRGQPADVITYTSLLDGLC 493
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
K ++ K A +F + + I+ T ++ L K R+K A +++ I +G +
Sbjct: 494 KNQNLDKAIA---LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCI 550
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y + LCKE +E + + + G IP A+ + S K + + E+LL
Sbjct: 551 DVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLL 610
Query: 314 SAVLDKGLL 322
++ KGLL
Sbjct: 611 HEMIAKGLL 619
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + ++ + G +L L K G + AI++ +I +R Y ++ LCK+
Sbjct: 227 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDK 286
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
E ++ RG P + S + C G+ LL+ + K + D + +
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L++ C ++ +A L + K +V TY L+DG G + A +IF M +
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V S S+ I+++ LC K + +AM EML P+ TY +I G
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 34/214 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K L +G VK+++ + + +G + Y +N LCK + LLR + +R
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS 267
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C E + + + +G+ D S+L+ +C Q+ A
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAF 327
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
+L ++ + DV TY +L+D L K+G+++EA +
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGV-------------------- 367
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M K G KP+ TY ++ G+
Sbjct: 368 --------------MTKEGVKPNVVTYSTLMDGY 387
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 199/443 (44%), Gaps = 26/443 (5%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A SLV+ ++ GL LE YR ++++ VP V +CN+LL+ L + ++ +A +Y
Sbjct: 102 EAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYD 161
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG 126
MV + +T ++ + LC+ GK E L++ + + V YN +ID Y KKG
Sbjct: 162 EMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKG 221
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFL 185
D A E+ + P TY +I++G + K EV D+++ M E+ L + H
Sbjct: 222 DTERANVLFKEL-KMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIY 280
Query: 186 SGNDYVIQKLSDMGKTYAAEMI---FKRACDEKIE----LQDDTCGCMLKALSKEGRVKE 238
N+ + + + AA+ + K CD + L +C C G V +
Sbjct: 281 --NNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSC--------GEVHK 330
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A Q+ +RG+ Y ++ CK+ + LL + ERG+ P + + +
Sbjct: 331 AEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIH 390
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G+ + + +++KG+L D+ + LM C ++ A L ++ +
Sbjct: 391 GLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAP 450
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
D L+DG + G EEA ++F+ E + + ++ C ++ A+
Sbjct: 451 DAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCF 510
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
M++ H PDE TY +I G++
Sbjct: 511 KRMIQGLHSPDEFTYSTIIDGYI 533
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 172/436 (39%), Gaps = 73/436 (16%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + ++D G ++ + M G P ++ N L+ E+ A
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L ++ G+ PNK + Y+ +++N Y K+G
Sbjct: 332 EQLLEQAIKRGLLPNKVS-------------------------YTPLIHN-----YCKQG 361
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
++ A D L +M + R P TY++++ G + +V+ + MVEK +LP
Sbjct: 362 EYLRALDLLIKM-SERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLP----D 416
Query: 187 GNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
N Y ++ L G+ AA+++ D+ + ++ + G +EA +++
Sbjct: 417 ANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFE 476
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
L E+GI Y A + CK G+++D A C K
Sbjct: 477 LTIEKGIDPGVVGYNAMIKGYCK-------FGMMKD-----------------ALLCFK- 511
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ ++ L S D F S++++ Y + A+ + + K +V TY
Sbjct: 512 --RMIQGLHSP--------DEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYT 561
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L++G G + A + F M L++ + ++ I++ C L KA ++ML
Sbjct: 562 LLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLME 621
Query: 424 GHKPDEATYKQVISGF 439
P++ TY +++G
Sbjct: 622 KCLPNDVTYNYLMNGL 637
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 139/371 (37%), Gaps = 56/371 (15%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L V M G +P + N L+ L ++ + A L M+ V+P+ F + +
Sbjct: 401 ALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVD 460
Query: 91 ILCRSGKFEVVLGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
R G FE L ++ GI V+ YN +I Y K G A M G + +
Sbjct: 461 GFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLH-S 519
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS+I+DG + + R+ GLMV+ P + +I G AE
Sbjct: 520 PDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPN--VVTYTLLINGFCLSGDINRAE 577
Query: 206 MIFK----------------------------RACD-------EKIELQDDTCGCMLKAL 230
FK +AC EK D T ++ L
Sbjct: 578 KTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637
Query: 231 ------------SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
S++ ++ + ++ G R + Y + + LC+ + L
Sbjct: 638 TNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLR 697
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ +G++P + L + C +G+ ++ ++S L++ L + S ++ + S
Sbjct: 698 DKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQ 757
Query: 339 RQIDKA-IALH 348
Q +A + LH
Sbjct: 758 GQTSEASLILH 768
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 201/432 (46%), Gaps = 13/432 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S ++ + G D ++++ M G P V N L+ L + + A MV
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 375
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFG 129
+DGV+ T+S++ L + KF V+ L+ G + V+YN +ID Y K G+ G
Sbjct: 376 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 435
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSG 187
A +M + + + P T +SI+ G + + E ++ I+ M+ + + P F +
Sbjct: 436 DALRIRGDMVS-KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT- 493
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L + +A + + D ++ L KEG+ +A++++ +
Sbjct: 494 ---IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 550
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E+G A ++ LCK +E LL+ ++ERG++ + + ++ C +GK +
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +L ++ +G+ D+F + L+ C ++D+A+ L + + +V TY V++
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Query: 368 DGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG K ++EE ++F + + + ++S + ++ C +A K HD+M G
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730
Query: 427 PDEATYKQVISG 438
P ATY +I G
Sbjct: 731 PTTATYSSLIHG 742
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 192/423 (45%), Gaps = 20/423 (4%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + + V+R + G P V C LL +L + NE+ + ++ M R GVSP+ + +S
Sbjct: 260 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFST 318
Query: 88 VAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC-NG 141
C+ GK E + L G+ +V+ YN +I K G+ AF +M +G
Sbjct: 319 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 378
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD---- 197
N T TYS +++G + EK ++ ++ +EK P N+ V L D
Sbjct: 379 VNAT--LITYSVLINGLMKLEKFNEANSVLKETLEKGFTP------NEVVYNTLIDGYCK 430
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
MG A I + I T +++ K G++++A I + RG ++
Sbjct: 431 MGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 490
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ ++ LC + E LR+++ R P L+ V C +GK + EL +L
Sbjct: 491 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 550
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+KG + ++L+ C + +A+ L K+ + LD TY+ L+ G K+G++E
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
E ++ M + + + ++ +++ +C + +L +A+ +E P+ TY +I
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Query: 437 SGF 439
G+
Sbjct: 671 DGY 673
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 176/429 (41%), Gaps = 44/429 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y G D L + M G P N+++ + ++ A C+ M+ G
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNL--------VI 119
S N ++ + LC + +FE L L + G+ ++++ L +
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 120 DFYSK---KGDFGAAFDRLNEMCNG---------------RNLTPGFS----TYSSILDG 157
+ + + KG FGA N + +G + L GF TY++++ G
Sbjct: 544 ELWFRLLEKG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 602
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K E ++ G MV++ + P F + +I + +GK A ++ +
Sbjct: 603 CCKEGKVEEGFKLRGEMVKQGIEPDTFTY--NLLIHGMCRIGKLDEAVNLWNECKSRDLV 660
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T G M+ K +++E +++ + + + + Y + C+ E L
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
D+ +G P S + C G+ ++ + L+ + +GLL + C ++L+ YC
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
Q+DK + + ++ + TY V++DG K G M+ A ++ M +V + +
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840
Query: 397 FVIVVSRLC 405
+ ++ + C
Sbjct: 841 YNVLTNGFC 849
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 147/360 (40%), Gaps = 43/360 (11%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G D +E++ + GF + NAL+ L + ++ A L M+ G +K T
Sbjct: 536 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 595
Query: 85 WSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + C+ GK F++ ++ GI + YNL+I + G A + NE C
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE-C 654
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
R+L P TY ++DG + +K E
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIE---------------------------------- 680
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
E +F + +EL +++A + G EA +++ + +GI + Y
Sbjct: 681 ---EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ ++ +C + E+ L+ ++ + G +P + + + C G+ +V +L +
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ + + +++ Y + + A L ++ D TY+VL +G K+G++EE
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQP---EEVCGLLRDVVERGYIP----CAMELSRFV- 297
+ E G+ V D ++V C + + G+ R + +G P C LS V
Sbjct: 234 VGESGVAVAAVDL--LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVK 291
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
A++ K W + + +G+ D + S+ + +C +++ AI L +EKL S
Sbjct: 292 ANELEKSYW------VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 345
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKN 416
+V TY+ L+ GL K G ++EA R + M + V ++ ++ ++++ L L++ +A
Sbjct: 346 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 405
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
E L+ G P+E Y +I G+
Sbjct: 406 LKETLEKGFTPNEVVYNTLIDGY 428
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 197/478 (41%), Gaps = 54/478 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + G P V N LL L ++ + A L+ M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
PN T++ + LCR G+ + LLD G+ + + Y ++D KKGD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+D + + + + M EK + P F +
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ AE + + + KI T ++ A KEG+ EA ++Y +
Sbjct: 296 --MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+++ + + + +G P + + + CG + +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 309 VEELLSAVLDKGLLLDS-----------------------------------FCCSSLME 333
ELL + + GL+ D+ C +L++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYDVLLDGLFKDGRMEEAVRI 382
C N ++ A+ + ++K K LD V TY++L+ GL +G+ EA +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M +V + ++ ++ LC L +A + D M P+ T+ +I+G+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 205/468 (43%), Gaps = 77/468 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D KG + L + R M V +P V +A++D+L + A L+ M
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 77 GVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ P+ FT++ + C SG++ +++ +L+ I V+ YN +I+ + K+G F A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ +EM R + P TYSS++DG + + + ++ + LM K P + ++ N +
Sbjct: 345 EELYDEMLP-RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLI 402
Query: 192 ---------------IQKLSDMG-----KTYAA-------------------EMIFKRAC 212
+ ++++ G TY EMI C
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + TC +L L G++K+A++++ ++ + + +D D N
Sbjct: 463 PDIV-----TCDTLLDGLCDNGKLKDALEMFKVMQK---SKKDLDASHPFN--------- 505
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
G P + ++ +GK+ E EEL + +G++ D+ SS++
Sbjct: 506 ------------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C ++D+A + + S +V T+ L++G K GR+++ + +F M +V
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +++ ++ + + A+ EM+ G PD T + +++G
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 18/358 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G F + E+Y M G +P ++++D +QN + A ++ M G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
SPN T++ + C + + + + LL ++G+ + + YN +I + GD AA
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLSG--- 187
D L EM + L P T ++LDG K + + + +M + K L H +G
Sbjct: 451 DLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 188 ----NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + GK AE +++ I T M+ L K+ R+ EA Q++
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + + +N CK + ++ L ++ RG + A+ +
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G ++ ++ G+ D+ +++ S ++ +A+A+ +EKL+ S+D++
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM---LEKLQMSMDLS 684
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/445 (19%), Positives = 200/445 (44%), Gaps = 14/445 (3%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
+SCE ++L L + KGL D ++++ M +P+V L+ + R
Sbjct: 37 ESCEA-GFGGESLKLQSGFHEIKGL-EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNL 117
L LY M R + + ++++++ + C K L L G++ V+ +N
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNT 154
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++ + A + ++M P T++++++G R + + ++ M+E
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGR 235
L P G ++ + G T +A + ++ +E + + ++ +L K+GR
Sbjct: 214 GLQPTQITYGT--IVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+A ++ + E+GI Y + + C + + LL++++ER P + +
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + +GK+ E EEL +L +G++ ++ SS+++ +C ++D A + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAM 414
S ++ T++ L+DG R+++ + + M E +V+ ++++ ++ + +L A+
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD T ++ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K ++ A+ + +++ G+ + ++ LC E + E L + E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +G+ E LL +++ GL ++++ C A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L K+E++ + +V Y ++D L KDGR +A +F M+E + ++ ++
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C A + EML+ PD TY +I+ F+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 197/478 (41%), Gaps = 54/478 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + G P V N LL L ++ + A L+ M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
PN T++ + LCR G+ + LLD G+ + + Y ++D KKGD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+D + + + + M EK + P F +
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ AE + + + KI T ++ A KEG+ EA ++Y +
Sbjct: 296 --MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+++ + + + +G P + + + CG + +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 309 VEELLSAVLDKGLLLDS-----------------------------------FCCSSLME 333
ELL + + GL+ D+ C +L++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYDVLLDGLFKDGRMEEAVRI 382
C N ++ A+ + ++K K LD V TY++L+ GL +G+ EA +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M +V + ++ ++ LC L +A + D M P+ T+ +I+G+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 205/468 (43%), Gaps = 77/468 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D KG + L + R M V +P V +A++D+L + A L+ M
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 77 GVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ P+ FT++ + C SG++ +++ +L+ I V+ YN +I+ + K+G F A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ +EM R + P TYSS++DG + + + ++ + LM K P + ++ N +
Sbjct: 345 EELYDEMLP-RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLI 402
Query: 192 ---------------IQKLSDMG-----KTYAA-------------------EMIFKRAC 212
+ ++++ G TY EMI C
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + TC +L L G++K+A++++ ++ + + +D D N
Sbjct: 463 PDIV-----TCDTLLDGLCDNGKLKDALEMFKVMQK---SKKDLDASHPFN--------- 505
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
G P + ++ +GK+ E EEL + +G++ D+ SS++
Sbjct: 506 ------------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C ++D+A + + S +V T+ L++G K GR+++ + +F M +V
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +++ ++ + + A+ EM+ G PD T + +++G
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 18/358 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G F + E+Y M G +P ++++D +QN + A ++ M G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
SPN T++ + C + + + + LL ++G+ + + YN +I + GD AA
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLSG--- 187
D L EM + L P T ++LDG K + + + +M + K L H +G
Sbjct: 451 DLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 188 ----NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + GK AE +++ I T M+ L K+ R+ EA Q++
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + + +N CK + ++ L ++ RG + A+ +
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G ++ ++ G+ D+ +++ S ++ +A+A+ +EKL+ S+D++
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM---LEKLQMSMDLS 684
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/445 (19%), Positives = 199/445 (44%), Gaps = 14/445 (3%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
+SCE ++L L + KGL D ++++ M +P+V L+ + R
Sbjct: 37 ESCEA-GFGGESLKLQSGFHEIKGL-EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNL 117
L LY M R + + ++++++ + C K L G++ V+ +N
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNT 154
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++ + A + ++M P T++++++G R + + ++ M+E
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGR 235
L P G ++ + G T +A + ++ +E + + ++ +L K+GR
Sbjct: 214 GLQPTQITYGT--IVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+A ++ + E+GI Y + + C + + LL++++ER P + +
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + +GK+ E EEL +L +G++ ++ SS+++ +C ++D A + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAM 414
S ++ T++ L+DG R+++ + + M E +V+ ++++ ++ + +L A+
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD T ++ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K ++ A+ + I++ G+ + ++ LC E + E L + E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +G+ E LL +++ GL ++++ C A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L K+E++ + +V Y ++D L KDGR +A +F M+E + ++ ++
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C A + EML+ PD TY +I+ F+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 212/473 (44%), Gaps = 49/473 (10%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A+S+V+ YS GL LE+Y +++ Y + P V ACN+LL+ L + I +A LY
Sbjct: 130 EAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYD 189
Query: 72 AMVR-DGVSP---NKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFY 122
M+ DG + ++ ++ + LC+ GK E L++ I + + YN +ID Y
Sbjct: 190 EMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGY 249
Query: 123 SKKGD----------------------FGA------------AFDRLNEMCNGRNLTPGF 148
KKGD +GA A DRL N R LT
Sbjct: 250 CKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNV 309
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
Y++I+D ++ + + M+E P ++ N + D GK A+ +
Sbjct: 310 QVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD-IVTYNTLISGSCRD-GKVSEADQLL 367
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
++A + + + ++ A K+G A ++ERG Y A V+ L
Sbjct: 368 EQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVA 427
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ + + ++ERG P A + ++ C K K + LL+ +LD+ +L D+F
Sbjct: 428 GEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVY 487
Query: 329 SSLMEYYCSNRQIDKAIAL-HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++L++ + N +D+A L + IEK + Y+ ++ G K G M++A+ + MK
Sbjct: 488 ATLVDGFIRNGNLDEARKLFELTIEKGMNP-GIVGYNAMIKGYCKFGMMKDAMACINRMK 546
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ V+ +L A K EM+KM KP+ TY +I+GF
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGF 599
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 177/428 (41%), Gaps = 44/428 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + KG F + M G V N ++DA Y+ I A M+ G
Sbjct: 280 IINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG 339
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAF 132
P+ T++ + CR GK LL+ + +M Y +I Y K+G + A
Sbjct: 340 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 399
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L EM R P TY +++ G + +V+ I M+E+ + P + + ++
Sbjct: 400 NWLIEMTE-RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY--NILM 456
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L K AA+++ D+ + ++ + G + EA +++ L E+G+
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y A + CK G+++D + C + +
Sbjct: 517 PGIVGYNAMIKGYCK-------FGMMKDA-----MACINRMKK----------------- 547
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ L D F S++++ Y +D A + ++ K+K +V TY L++G +
Sbjct: 548 ------RHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCR 601
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G + +++IF M+ +V + ++ I++ C +L A +EML P++ T
Sbjct: 602 KGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVT 661
Query: 432 YKQVISGF 439
+ +++GF
Sbjct: 662 FNYLVNGF 669
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 202/440 (45%), Gaps = 23/440 (5%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D S+AL+L Y + F++ + ++ M G P V N L++ L + + A+
Sbjct: 190 DRISEALALF--GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYS 123
L MV G+ + T+ + +C+ G + L LL ++ I V +Y+ +ID
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K G A +EM + + P TY+ ++DG + + + R++ M+E+++ P
Sbjct: 308 KDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD- 365
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE--LQDDTC--GCMLKALSKEGRVKEA 239
L+ N + + + GK + AE + CDE + + DT M+ K R +A
Sbjct: 366 VLTFNALISASVKE-GKLFEAE----KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ L++ + + ++V C+ + +E LLR++ RG + + +
Sbjct: 421 KHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C ++L ++ G+ D+ C+ L+ +C N ++++A+ L I+ K LD
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
Y++++ G+ K +++EA +F + V ++ +++S C + A
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 419 EMLKMGHKPDEATYKQVISG 438
+M GH+PD +TY +I G
Sbjct: 597 KMKDNGHEPDNSTYNTLIRG 616
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 183/427 (42%), Gaps = 35/427 (8%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M+R F AV CN ++ R N +A LY M + N ++++++ + C
Sbjct: 97 MVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCH 155
Query: 97 KFEVVLGLL----------DSGIYSSVMYNLVID--FYSKKGDFG-----------AAFD 133
K L D ++++++ L ++ FG A FD
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD 215
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
++ E+ LTP T++++++G + + +V MV K L G ++
Sbjct: 216 QMVEI----GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT--IVN 269
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ MG T +A + + + I+ ++ L K+G +A ++ + E+GI
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ C + + LLRD++ER P + + +++ +GK E E+L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+L + + D+ +S++ +C + + D A + L S DV T++ ++D +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRA 445
Query: 374 GRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
R++E +++ + + V +++++ ++ C + L A EM+ G PD T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 433 KQVISGF 439
++ GF
Sbjct: 506 NILLYGF 512
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 150/369 (40%), Gaps = 36/369 (9%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +A++D L + A L+ M+ G++PN FT++ + C G++ L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L I + +N +I K+G A +EM + R + P TY+S++ G
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH-RCIFPDTVTYNSMIYGFC 412
Query: 160 RYEKTEVSDRIVGLMVEKKL-------------------------LPKHFLSGN----DY 190
++ + + + + LM + + + L N +
Sbjct: 413 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I ++ AA+ +F+ + TC +L + +++EA++++ +I
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I + Y ++ +CK + +E L + G P + ++ CGK +
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + D G D+ ++L+ +IDK+I L ++ S D T ++ D L
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-L 651
Query: 371 FKDGRMEEA 379
DGR++++
Sbjct: 652 ITDGRLDKS 660
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 193/429 (44%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++C+S G V+ + G+ P L+ L + +I A + +
Sbjct: 93 TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
V G NK + + LC+ G+ L LL D + VMYN +ID K
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AFD +EM + + ++P TYS+++ G K + + M+ +++ P +
Sbjct: 213 NEAFDLYSEMVS-KGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFS- 270
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ G+ A+ + + I+ T ++ +V +A I++ +++
Sbjct: 271 -ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N CK + +E L +++ + IP + + + C GK
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L+ + D+G+ D +S+++ C N Q+DKAIAL K++ D+ TY +L+D
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++A IF D + + ++ ++ +++ C KA+ +M G P
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIP 509
Query: 428 DEATYKQVI 436
+ TY+ +I
Sbjct: 510 NAKTYEIII 518
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 156/347 (44%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D++ + + A LY MV G+SP+ T+S + C GK +GL
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I + +++++D + K+G A + L M + + P TY S++DG
Sbjct: 254 FNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK-QGIKPDVVTYCSLMDGYC 312
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + I M + + + + +I + K A +FK + I
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTAN--VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K G++ A+++ + +RG+ Y + ++ LCK HQ ++ LL
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + G P + + C G+ K+ + + +L KG + + + +++ +C N
Sbjct: 431 KMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDND 490
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
DKA+AL K+E + TY++++ LF+ + A ++ M
Sbjct: 491 LFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 36/287 (12%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I S +G T+ + +F + E T ++K L +G++ +A+ + +
Sbjct: 95 NILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA 154
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G + Y +N LCK Q LLR V + P + + + S C E
Sbjct: 155 LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 214
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L S ++ KG+ D S+L+ +C +++ AI L K+ + + DV T+ +L+D
Sbjct: 215 AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274
Query: 369 GLFKDGRMEEAVR-----------------------------------IFDYMKELKVVS 393
G K+GR++EA IF+ M + V +
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ I+++ C +K++ +AM EM PD TY +I G
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 153/365 (41%), Gaps = 45/365 (12%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ +G+ Q + + + ++D L + ++Y M G P V +AL+
Sbjct: 183 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC 242
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI----- 109
++ A L+ M+ + ++P+ +T+S++ C+ G+ + V+ ++ GI
Sbjct: 243 ILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVV 302
Query: 110 -YSSVM------------------------------YNLVIDFYSKKGDFGAAFDRLNEM 138
Y S+M YN++I+ + K A + EM
Sbjct: 303 TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM 362
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ +N+ P TY+S++DG + K + ++V M ++ + P ++ N ++ L
Sbjct: 363 -HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV-PHDKITYNS-ILDALCKN 419
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ A + + DE I+ T ++ L K GR+K+A I+ + +G + Y
Sbjct: 420 HQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTY 479
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ C ++ LL + + G IP A + S K + E+LL ++
Sbjct: 480 TVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIA 539
Query: 319 KGLLL 323
+GLL
Sbjct: 540 RGLLF 544
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 190/428 (44%), Gaps = 9/428 (2%)
Query: 19 LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
L ++ K + + + M ++ V + N L++ L R N + + + G M + G+
Sbjct: 100 LGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGI 159
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFD 133
P+ T++ + LC GK + + L + + + + Y VI+ K G+ A D
Sbjct: 160 HPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVD 219
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+M P TYS+I+D + + + MVE+ + P F + ++
Sbjct: 220 VFKKM-EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS--IVH 276
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
++G+ A +FK + T ++ L KEG V EA ++ ++E+G+
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
S Y A ++ C + E + ++ +G P A + + C + E + LL
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL 396
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + K L D+ S+LM+ C + +A+ L ++ ++ TY +LLDG K
Sbjct: 397 AEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKH 456
Query: 374 GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G ++EA+++ MKE K+ + + I++ + +L A + ++ G +PD TY
Sbjct: 457 GHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTY 516
Query: 433 KQVISGFM 440
+I G +
Sbjct: 517 TVMIKGLL 524
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 160/391 (40%), Gaps = 20/391 (5%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + V++ G ++V++ M G P V + ++D+L + + A
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDF 121
MV G+ PN FT++ + C G+ L + VM N V +D
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312
Query: 122 YSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
K+G A F+ + E + + P STY++++DG + ++ +M+ K
Sbjct: 313 LCKEGMVSEARLVFETMTE----KGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG 368
Query: 179 LLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
P + + N Y + D K+ AEM K + + T +++ L + GR
Sbjct: 369 CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTV-----TYSTLMQGLCQLGR 423
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
KEA+ ++ + G Y ++ CK +E LL+ + E+ P + +
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ GK + +EL S + G D + +++ D+A L K+E
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +Y+V++ G ++ A+R+ D M
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 27/304 (8%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GRD + ++ +++D +G+ + V+ M G P +S NAL+D Q +
Sbjct: 296 GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM 114
A ++ M+R G +P +++++ C+S + + LL D+ YS++M
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
L + G A + EMC+ P TY +LDG ++ + + +++ M
Sbjct: 416 QGLC-----QLGRPKEALNLFKEMCS-YGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM 469
Query: 175 VEKKLLPK--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
EKKL P H+ +I+ + GK A+ +F + + T M+K L K
Sbjct: 470 KEKKLEPNIVHY----TILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
EG EA ++ + + G Y + + L+ ++V + + ++
Sbjct: 526 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF---SVN 582
Query: 293 LSRF 296
LS F
Sbjct: 583 LSTF 586
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 182/413 (44%), Gaps = 21/413 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L++ L R+ + A L M+ DG+ PN+ T+ + +C+ G L L
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239
Query: 105 L------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L I + V+YN +ID K G A + EM + + P TY+ +++G
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM-QEKEIFPDIVTYNCMINGF 298
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ +++++ M+E+K+ P + +I GK + AE ++ I
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPD--VVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T M+ K+ R+ A +++L +G + + + C+ + ++ LL
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ E G + + + + C G ++LL ++ G+ + C++L++ C N
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476
Query: 339 RQIDKAIALHIKIEKLKGSL-----------DVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++ A+ + ++K K + DV TY++L+ GL +G+ EA +++ M
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMP 536
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V + ++ ++ LC L +A + D M PD T+ +I+G+
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGY 589
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/414 (19%), Positives = 173/414 (41%), Gaps = 51/414 (12%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL--------LDSGIYS--------- 111
L+G MVR P+ + + ++ R G+ +VV+ L + YS
Sbjct: 68 LFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFC 127
Query: 112 -----------------------SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
V +N ++ + A D ++MC P
Sbjct: 128 SCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-----PNV 182
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
T++++++G R + + ++ M+E L P G ++ + MG T +A +
Sbjct: 183 VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT--IVDGMCKMGDTVSALNLL 240
Query: 209 KRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
++ +E + + ++ L K+GR +A ++ + E+ I Y +N C
Sbjct: 241 RKM-EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ + LL++++ER P + S + + +GK+ E EEL +L + ++ +
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SS+++ +C ++D A + S D+ T++ L+ G + R+++ +++ M
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E +V+++ ++ ++ C + +L A EM+ G P+ T ++ G
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 158/390 (40%), Gaps = 54/390 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S +++ + +G F + E+Y M +P+ ++++D +QN + A ++
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG-IYSSVMYNLVIDFYSKKGDF 128
G SP+ T++ + CR+ + + + LL ++G + +++ Y +I + + GD
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AA D L EM + + P T +++LDG
Sbjct: 445 NAAQDLLQEMISS-GVCPNVVTCNTLLDG------------------------------- 472
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEK-----------IELQDDTCGCMLKALSKEGRVK 237
L D GK A +FK K +E T ++ L EG+
Sbjct: 473 ------LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA ++Y + RGI Y + ++ LCK+ + +E + + + + P + + +
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C G + EL + +G++ D+ +L+ + ID A+ + ++
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
D T +L GL+ +E AV + + ++
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 202/440 (45%), Gaps = 23/440 (5%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D S+AL+L Y + F++ + ++ M G P V N L++ L + + A+
Sbjct: 190 DRISEALALF--GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYS 123
L MV G+ + T+ + +C+ G + L LL ++ I V +Y+ +ID
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K G A +EM + + P TY+ ++DG + + + R++ M+E+++ P
Sbjct: 308 KDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD- 365
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE--LQDDTC--GCMLKALSKEGRVKEA 239
L+ N + + + GK + AE + CDE + + DT M+ K R +A
Sbjct: 366 VLTFNALISASVKE-GKLFEAE----KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ L++ + + ++V C+ + +E LLR++ RG + + +
Sbjct: 421 KHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C ++L ++ G+ D+ C+ L+ +C N ++++A+ L I+ K LD
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
Y++++ G+ K +++EA +F + V ++ +++S C + A
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 419 EMLKMGHKPDEATYKQVISG 438
+M GH+PD +TY +I G
Sbjct: 597 KMKDNGHEPDNSTYNTLIRG 616
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 183/427 (42%), Gaps = 35/427 (8%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M+R F AV CN ++ R N +A LY M + N ++++++ + C
Sbjct: 97 MVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCH 155
Query: 97 KFEVVLGLL----------DSGIYSSVMYNLVID--FYSKKGDFG-----------AAFD 133
K L D ++++++ L ++ FG A FD
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD 215
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
++ E+ LTP T++++++G + + +V MV K L G ++
Sbjct: 216 QMVEI----GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT--IVN 269
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ MG T +A + + + I+ ++ L K+G +A ++ + E+GI
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ C + + LLRD++ER P + + +++ +GK E E+L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+L + + D+ +S++ +C + + D A + L S DV T++ ++D +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRA 445
Query: 374 GRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
R++E +++ + + V +++++ ++ C + L A EM+ G PD T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 433 KQVISGF 439
++ GF
Sbjct: 506 NILLYGF 512
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 134/337 (39%), Gaps = 35/337 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +A++D L + A L+ M+ G++PN FT++ + C G++ L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L I + +N +I K+G A +EM + R + P TY+S++ G
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH-RCIFPDTVTYNSMIYGFC 412
Query: 160 RYEKTEVSDRIVGLMVEKKL-------------------------LPKHFLSGN----DY 190
++ + + + + LM + + + L N +
Sbjct: 413 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I ++ AA+ +F+ + TC +L + +++EA++++ +I
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I + Y ++ +CK + +E L + G P + ++ CGK +
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
L + D G D+ ++L+ +IDK+I L
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 123/320 (38%), Gaps = 4/320 (1%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G + D + R M P V NAL+ A ++ ++ A L M+
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+ P+ T++ + C+ +F+ + D V+ +N +ID Y + L
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E+ + R L +TY++++ G + + + M+ + P + ++
Sbjct: 457 EI-SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC--NILLYGFC 513
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ K A +F+ KI+L ++ + K +V EA ++ + G+
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ C + + L + + G+ P + + G+ + EL+S +
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 317 LDKGLLLDSFCCSSLMEYYC 336
G D+F E C
Sbjct: 634 RSNGFSGDAFTIKMAEEIIC 653
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 190/405 (46%), Gaps = 9/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P + N L++ L ++++ A L MV +G PN T++ + +C+SG +
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL + + + V Y+ +ID + G AA EM + + TY+S++
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSLVTYNSLVG 248
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K +++ M +K++P + ++ N +I GK A ++K + I
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIP-NVITFN-VLIDVFVKEGKLQEANELYKEMITKGI 306
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + R+ EA + L+ + + + + CK + +E
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L R + +RG + + S V C GK + EEL ++ G+L D L++ C
Sbjct: 367 LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLC 426
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
N +++KA+ + ++K K +LD+ Y ++++G+ K G++E+A +F + V +
Sbjct: 427 DNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 486
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ +++S LC L +A +M + G++P++ TY +I +
Sbjct: 487 TYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 192/414 (46%), Gaps = 9/414 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L+ + M + G + N +++ R + A + G +++ G P+ T++ +
Sbjct: 85 LDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 144
Query: 92 LCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC K +V ++++G +V+ YN +++ K GD A D L +M + RN+
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM-DERNVKA 203
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TYS+I+D R + + + M K + K L + ++ L GK
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSLVTYNSLVGGLCKAGKWNDGVQ 261
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ K KI T ++ KEG+++EA ++Y + +GI+ Y + ++ C
Sbjct: 262 LLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYC 321
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+++ E +L +V P + + + C + E +L + +GL+ ++
Sbjct: 322 MQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV 381
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S L++ +C + +++ A L ++ L DV TY +LLDGL +G++E+A+ IF+ +
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441
Query: 387 KELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ K+ + + I++ +C ++ A + G KP+ TY +ISG
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 495
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 166/355 (46%), Gaps = 24/355 (6%)
Query: 107 SGIYSSVMYNLVIDFYSKKGDFGAAFD--RLNEMCN---------------GRNLTPGF- 148
SG+ S+ +NLV+DF K G A + LN M N G+ + G+
Sbjct: 73 SGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 132
Query: 149 ---STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
+T++++++G K + +V MVE P + + ++ + G T A
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPN--VVTYNSIVNGICKSGDTSLAL 190
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ ++ + ++ T ++ +L ++G + AI ++ + +GI Y + V L
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGL 250
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK + + LL+D+ R IP + + + +GK +E EL ++ KG+ ++
Sbjct: 251 CKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNT 310
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+SLM+ YC ++ +A + + + S D+ T+ L+ G K R++E +++F
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK 370
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + +V+++ ++ I+V C +L A + EM+ +G PD TY ++ G
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 173/429 (40%), Gaps = 57/429 (13%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V RM+ G P V N++++ + + + LA L M V + FT+S + LC
Sbjct: 158 VARMVE-NGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216
Query: 94 RSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R G + + L GI SS V YN ++ K G + L +M R + P
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM-TSRKIIPNV 275
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQ-KLSDMGKTYAA 204
T++ ++D + K + ++ + M+ K + P + Y +Q +LS+
Sbjct: 276 ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML-- 333
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+++ + C I T ++K K RV E ++++ IS+RG+ Y V
Sbjct: 334 DLMVRNNCSPDIV----TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQG 389
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C+ + E L +++V G +P M + C GK ++ E+ + + LD
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449
Query: 325 SFCCSSLMEYYCSNRQIDKAIALH----------------IKIEKL--KGSLDVA----- 361
+ ++E C +++ A L + I L KGSL A
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 509
Query: 362 ------------TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV-----SRL 404
TY+ L+ +DG + + ++ + MK + +S + +V S +
Sbjct: 510 KMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAV 569
Query: 405 CHLKELRKA 413
KE R++
Sbjct: 570 WWFKEPRRS 578
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 159/383 (41%), Gaps = 49/383 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + DG+++ + M +P V N L+D ++ +++ A+ LY M+ G+SPN T
Sbjct: 254 GKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT- 312
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
YN ++D Y + A + L+ M N +
Sbjct: 313 -----------------------------YNSLMDGYCMQNRLSEANNMLDLMVRN-NCS 342
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---DYVIQKLSDMGKTY 202
P T++S++ G Y K + D G+ + +K+ + ++ ++Q GK
Sbjct: 343 PDIVTFTSLIKG---YCKVKRVDE--GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLE 397
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
AE +F+ + T G +L L G++++A++I+ + + + + Y +
Sbjct: 398 IAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIII 457
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+CK + E+ L + +G P M + ++ C KG E LL + + G
Sbjct: 458 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNE 517
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL------FKDGRM 376
+ ++L+ + + + + L +++ S D ++ +++D L FK+ R
Sbjct: 518 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRR 577
Query: 377 EEAVRIF----DYMKELKVVSSS 395
V+ F Y+ +++S
Sbjct: 578 SPGVKRFRGTQAYLMPFNTITAS 600
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 201/505 (39%), Gaps = 84/505 (16%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++L Y KGL + L V+ M G +P++ +CN+LL+ L + E A +Y M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDF 128
+R G+ P+ F S++ C+ GK + G + + G+ + V Y+ +I+ Y GD
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243
Query: 129 GAAFDRLNEMCN---GRN--------------------------------LTPGFSTYSS 153
AA L M RN L P Y
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++DG R K + + R++ M+ L F+ + +I G+ + AE + R D
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS--LINGYCKRGEIHEAEGVITRMVD 361
Query: 214 -----------------------------------EKIELQDDTCGCMLKALSKEGRVKE 238
E IE T +LK L + G +
Sbjct: 362 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 421
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+QI+HL+ +RG+ + Y ++ L K E L +D++ RG+ + + ++
Sbjct: 422 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 481
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK E EE+ + D G D +L++ YC + +A + +E+ S
Sbjct: 482 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 541
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAM 414
+ Y+ L+ GLFK R+ V + D + E+ + + ++ L C L KA
Sbjct: 542 SIEMYNSLISGLFKSRRL---VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
++ EM + G + ++SG
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGL 623
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 187/458 (40%), Gaps = 49/458 (10%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S + + +LD Y +G + + M G P V N LL L R A ++
Sbjct: 368 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSS-VMYNLVIDFYSKKG 126
M++ GV+P++ +S + L + FE L L G S + +N +I K G
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 487
Query: 127 DFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-- 181
A FD++ ++ +P TY +++DG + + ++ G M + + P
Sbjct: 488 KMVEAEEIFDKMKDL----GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 543
Query: 182 ---KHFLSG--------------NDYVIQKLSDMGKTYAA-------EMIFKRACDEKIE 217
+SG + I+ L+ TY A E + +A E
Sbjct: 544 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFE 603
Query: 218 LQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ ++ C M+ L + GR+ EA + + + G D+ F+ +
Sbjct: 604 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF---PDHECFLKSDIRYAA 660
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+++ L + + +P + + +A C GK + S + KG + D+F +
Sbjct: 661 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 720
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L+ Y + +D+A L ++ + ++ TY+ L++GL K ++ A R+F + +
Sbjct: 721 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 780
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+ + ++ ++ C + + A K D+M++ G P
Sbjct: 781 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + M G VP + NAL++ L + + A L+ + + G+ PN
Sbjct: 725 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 784
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVMYNLV 118
T++ + C+ G + L D GI S+ NL+
Sbjct: 785 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCNLL 825
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 185/432 (42%), Gaps = 35/432 (8%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR-QNEIRLASC 68
S S LV+ YS L L + + + +GF+P V + NA+LDA R + I A
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDF 128
++ M+ VSPN FT++++ + C +G +V L L
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL------------------------ 227
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
FD++ + P TY++++DG + K + +++ M K L P L
Sbjct: 228 ---FDKMET----KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN--LISY 278
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ VI L G+ + L + T ++K KEG +A+ ++ +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y + ++ +CK L + RG P + V KG E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L + D G ++L+ +C +++ AIA+ +++ S DV +Y +L
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + ++EA+R+ M E + + ++ ++ C + ++A ++EML++G P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 428 DEATYKQVISGF 439
DE TY +I+ +
Sbjct: 519 DEFTYTALINAY 530
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 26/430 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L ++ M G +P V N L+D + +I L +M G+ PN ++++V
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 91 ILCRSGKFE---VVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LCR G+ + VL ++ YS V YN +I Y K+G+F A EM LT
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLT 342
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+S++ + + + M + L P ++ S G A
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE--RTYTTLVDGFSQKGYMNEAY 400
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + D T ++ G++++AI + + E+G++ Y ++
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+ + +E + R++VE+G P + S + C + + KE +L +L GL D
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIF- 383
F ++L+ YC ++KA+ LH ++ + KG L DV TY VL++GL K R EA R+
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 384 ------------DYMKELKVVSSSSFVIVVSRL---CHLKELRKAMKNHDEMLKMGHKPD 428
Y ++ S+ F VVS + C + +A + + ML HKPD
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 429 EATYKQVISG 438
Y +I G
Sbjct: 640 GTAYNIMIHG 649
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 139/360 (38%), Gaps = 54/360 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D +S KG + V R M GF P+V NAL++ ++ A + M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGI------YSSVM----------- 114
G+SP+ ++S V CRS + L +++ GI YSS++
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 115 -------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
Y +I+ Y +GD A NEM + + P TYS ++
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSVLI 562
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPK----HFLSGN---------DYVIQKLSDMGKTY 202
+G + +T + R++ + ++ +P H L N +I+ G
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A+ +F+ + + M+ + G +++A +Y + + G + A V
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L KE + E+ ++ V+ + A + V +G V ++L+ + G L
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFL 742
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 29/282 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L V R M G P ++L+ Q + A LY M+R G+ P++FT++ +
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 90 QILCRSGKFEVVLGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C G E L L ++ G+ V+ Y+++I+ +K+ A L ++ ++
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGL-----------MVEKKLLPKHFLSGNDYVIQ 193
P TY ++++ E V I G + E L H G Y I
Sbjct: 588 -PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 194 -----KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ-IYHLIS 247
+ D+ K Y ++K L T ++KAL KEG+V E I H++
Sbjct: 647 IHGHCRAGDIRKAYT---LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL- 702
Query: 248 ERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
R + +++ V + +E + V +L ++ + G++P
Sbjct: 703 -RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 200/453 (44%), Gaps = 47/453 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D V+ MR +GF P NALL L + A LY M++ G SP+ T++ +
Sbjct: 68 DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ GK + L + D + V YN +I+ + K A L M + +L
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS-ESL 186
Query: 145 TPGFSTYSSILDGARRYEKTE-----------------VSDRIVGLMVE-------KKLL 180
P TY+S+++G + + + S I GL E ++LL
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLL 246
Query: 181 PKHFLSG-------NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
K L+G + +I L+ A +F + E + T ++ L KE
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
RV EA +++ + + G+ Y F++ LCK + E+ +L+D+ E+G +P +
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C + + E E LLS + KG ++ ++L+ C + KA+ ++ K
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426
Query: 354 LKGSLDVATYDVLLDGLFK---DGRMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCH 406
V TY++L+DGL K +GR++EA+ +FD M E VV+ S+ + + +
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L + R+ + M G P+ TY +ISG
Sbjct: 487 LDDARRLL---GAMEAKGCIPNVYTYNSLISGL 516
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 200/428 (46%), Gaps = 8/428 (1%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L + G + L+++ GFVP V NAL++ + +++ A + MV +
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185
Query: 78 VSPNKFTWSLVAQILCRSGKF-EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ P+ T++ + LC++G+ E + ++D G +V+ Y+ +I ++ + +L
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQL 245
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
E P +Y++++ G R + + ++ G ++ + P+ + + +I L
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPE--VPTYNILIDGL 303
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ A +F +E T + L K GRV++A+ + + E+G
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ A +N LCKE + +E LL + +G P A+ + + QC GKWK+
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQ---IDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+L +G+ + L++ C RQ I +AI L + + DV TY L+DGL K
Sbjct: 424 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 483
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G++++A R+ M+ + + ++ ++S LC L ++ +A++ M++ G PD T
Sbjct: 484 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTIT 543
Query: 432 YKQVISGF 439
Y +IS
Sbjct: 544 YGTIISAL 551
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 179/401 (44%), Gaps = 15/401 (3%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
+S N + L R + I A ++ M + G PN+ T++ + LC G+ L +
Sbjct: 50 ISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYE 109
Query: 107 SGI---YSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
I YS V YN ++ + K G A ++ + R P TY+++++G +
Sbjct: 110 RMIKAGYSPDVVTYNTLLHGFCKVGKLDEAL-KIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+K + + RI+ MV + L+P + + ++ L G+ A M+ D+
Sbjct: 169 DKLDEAQRILQRMVSESLVPD--VVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVI 223
Query: 222 TCGCMLKALSKE-GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ L +E R++ A Q+ + G Y A ++ L +E E L
Sbjct: 224 TYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGS 283
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
V+ +GY P + + + + E EL S ++ GL D+ + ++ C +
Sbjct: 284 VLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 343
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFV 398
++ A+ + +++ DV +++ +++GL K+ R++EA + M E K S + SF
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM-EAKGCSPNAISFN 402
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C + +KAM EMLK G KP TY ++ G
Sbjct: 403 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 169/360 (46%), Gaps = 23/360 (6%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + G P + + NAL+ L R+ + A L+G+++R G P T++++ L + +
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308
Query: 98 ----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
FE+ GL+ G+ ++ Y + ID K G A L +M + + P +++
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM-DEKGCVPDVVSHN 367
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + ++ + ++ ++ M K P + +S N + + GK A FK
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSP-NAISFNTLICGQCR-AGKWKKAMTTFKEML 425
Query: 213 DEKIELQDDTCGCMLKALSK---EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++ T ++ L K EGR+KEAI ++ + E+G Y A ++ L K
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ LL + +G IP + ++ CG K E EL A+++KG + D+
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT------YDVLLDGLFKDGRMEEAVRIF 383
+++ C +DKA+AL GSL+ Y L+DGL R++EA+++
Sbjct: 546 TIISALCKQEMVDKALAL------FDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 181/419 (43%), Gaps = 25/419 (5%)
Query: 16 SLVLDCYSHK----GLFMDG-LEVYRMMRV-YGFVPAVSACNALLDALYRQ-NEIRLASC 68
SLV D ++ GL +G ++ RM+ V GF P V + L+ L R+ + A
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYS 123
L MV +G P+ +++ + L R L L S G V YN++ID
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-- 181
K+ AF+ + + L P TY+ +DG + + E + ++ M EK +P
Sbjct: 305 KEDRVNEAFELFSGLVK-HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363
Query: 182 -KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
H N +K D + + M K I CG + G+ K+A+
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG-----QCRAGKWKKAM 418
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQP---EEVCGLLRDVVERGYIPCAMELSRFV 297
+ + +RG+ Y V+ LCK Q +E L ++E+G +P + S +
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
GK + LL A+ KG + + + +SL+ C ++D+A+ L + + +
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMK 415
D TY ++ L K +++A+ +FD E VV +S + ++ LC + + +A+K
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 11/282 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + + ++ +D G D L + + M G VP V + NA+++ L ++ +
Sbjct: 322 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 381
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVID 120
A L M G SPN +++ + CR+GK++ + +L G+ +V+ YN+++D
Sbjct: 382 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441
Query: 121 FYSK---KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
K +G A + M + P TYS+++DG + K + + R++G M K
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIE-KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+P + + +I L + K A +F ++ T G ++ AL K+ V
Sbjct: 501 GCIPNVYTYNS--LISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVD 558
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+A+ ++ E G+ Y++ ++ LC + +E LL+
Sbjct: 559 KALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 111/240 (46%), Gaps = 11/240 (4%)
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+ +++ K CD T + L + R+ +A ++ + + G Y A
Sbjct: 38 FVEQLLVKGLCDIS------TFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNAL 91
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LC + + L +++ GY P + + + C GK E ++ + +G
Sbjct: 92 LSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGF 151
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-V 380
+ D ++L+ +C ++D+A + ++ DV TY+ L++GL K+GR++EA +
Sbjct: 152 VPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARM 211
Query: 381 RIFDYMKELKVVSSSSFVIVVSRLC-HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I D V++ S+ +S LC L+ L A + ++M+ G KPD +Y +I G
Sbjct: 212 LIVDKGFSPNVITYSTL---ISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL 268
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L L GR+ +A +Y + + G + Y ++ CK + +E +
Sbjct: 87 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V+RG++P + + + C K E + +L ++ + L+ D +SL+ C N ++
Sbjct: 147 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRV 206
Query: 342 DKAIALHIKIEKLKG-SLDVATYDVLLDGLFKD-GRMEEAVRIFDYMK----ELKVVSSS 395
D+A L + KG S +V TY L+ GL ++ R+E A ++ + M + +VS +
Sbjct: 207 DEARMLIVD----KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYN 262
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + ++R + E A+K +L+ G++P+ TY +I G +
Sbjct: 263 ALIHGLAREQGVSE---ALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KGSLDVATYDVLLDGLFKDGRMEEAVR 381
D++ L+ + +I+KA H +E+L KG D++T+++ + GL + R+ +A
Sbjct: 15 DAYTVGILLRSLLKSGKIEKA---HRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQT 71
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M++ + ++ ++S LC+ + A ++ M+K G+ PD TY ++ GF
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY---- 335
D + R Y P A + + S GK ++ + +L KGL C S Y
Sbjct: 6 DKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-----CDISTFNIYISGL 60
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C +I A + + K + TY+ LL GL GRM +A +++ M +K S
Sbjct: 61 CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM--IKAGYSP 118
Query: 396 SFVIVVSRL---CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V + L C + +L +A+K D +K G PD TY +I+GF
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGF 165
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 192/439 (43%), Gaps = 14/439 (3%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A S ++ Y G L+++ +R ++ +P V A N+LL+ L + ++ +A LY
Sbjct: 127 EAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYD 186
Query: 72 AMVRD----GVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFY 122
M++ G + +T S+V + LC GK E +V G + V YN++ID Y
Sbjct: 187 KMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGY 246
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
KKGD A L E+ + + P TY ++++G + + E D+++ M + L
Sbjct: 247 CKKGDLQCATRTLKEL-KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMN 305
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ N VI G A +R + T M+ K GR+KEA +
Sbjct: 306 VKVFNN--VIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEF 363
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
ERG+ Y ++ CK+ + G+L + E G P + F+
Sbjct: 364 LEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVV 423
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ + +++KG+ D+ + LM C N + L ++ DV
Sbjct: 424 HGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYV 483
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
+ L+DG ++G ++EA++IF + V + ++ C ++ A+ ++M
Sbjct: 484 FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMK 543
Query: 422 KMGHKPDEATYKQVISGFM 440
+ H PDE TY VI G++
Sbjct: 544 NVHHAPDEYTYSTVIDGYV 562
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 201/451 (44%), Gaps = 54/451 (11%)
Query: 1 MIQSCEGRDSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M+Q+ +G + D S+V+ + G +G + + G VP V N ++D
Sbjct: 188 MLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYC 247
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV- 113
++ +++ A+ + GV P T+ + C++G+FE V LL G+ +V
Sbjct: 248 KKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVK 307
Query: 114 MYNLVIDFYSKKGDFGAAFD---RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++N VID K G A + R+ EM G P +TY+++++ + + + + +D
Sbjct: 308 VFNNVIDAEFKYGLVTKAAETMRRMAEMGCG----PDITTYNTMINFSCKGGRIKEADEF 363
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ E+ LLP F +Y ++ A
Sbjct: 364 LEKAKERGLLPNKF----------------SYTP---------------------LMHAY 386
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD-VVERGYIPC 289
K+G +A + I+E G Y AF++ + H +V ++R+ ++E+G P
Sbjct: 387 CKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVV-VHGEIDVALMVREKMMEKGVFPD 445
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
A + ++ C G++ ++ LLS +LD+ + D + ++LM+ + N ++D+AI +
Sbjct: 446 AQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFK 505
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
I + + Y+ ++ G K G+M +A+ + MK + ++ V+
Sbjct: 506 VIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQH 565
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A+K +M+K KP+ TY +I+GF
Sbjct: 566 DMSSALKMFGQMMKHKFKPNVITYTSLINGF 596
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 131/329 (39%), Gaps = 23/329 (6%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L+D R E+ A ++ ++R GV P ++ + + C+ GK L
Sbjct: 479 PDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSC 538
Query: 105 LDS--GIYSSV---MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ ++ + Y+ VID Y K+ D +A +M + P TY+S+++G
Sbjct: 539 LNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK-FKPNVITYTSLINGFC 597
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++++ M L+P + ++ GK A IF+
Sbjct: 598 KKADMIRAEKVFRGMKSFDLVPN--VVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPN 655
Query: 220 DDTCGCMLKALSKEGRVKEAIQ--------------IYHLISERGITVRDSDYYAFVNVL 265
D T ++ L+ I+ + ++ G + Y + + L
Sbjct: 656 DATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCL 715
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK + LL ++ +G++ ++ + + C KGK KE ++S L+K L +
Sbjct: 716 CKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTA 775
Query: 326 FCCS-SLMEYYCSNRQIDKAIALHIKIEK 353
S +L +Y R + ++ L IE+
Sbjct: 776 VKYSLTLDKYLYQGRLSEASVILQTLIEE 804
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 194/443 (43%), Gaps = 19/443 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + G P V LL L ++ + A + M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
PN T++ + LCR G+ + LLD G+ + + Y ++D KKGD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+D + + + + M EK + P F +
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ AE + + + KI T ++ A KEG+ EA ++Y +
Sbjct: 296 --MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+ + + + + +G P + + CG + +
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
ELL + +GL+ ++ ++L+ +C ++ A+ L ++ D+ T + LLD
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS------------FVIVVSRLCHLKELRKAMKN 416
GL +G++++A+ +F M++ K+ +S + I++ L + + +A +
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++EM G PD TY +I G
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGL 556
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 185/428 (43%), Gaps = 21/428 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+ + M P V L++ L R+ I A L M+ DG+ P + T+ +
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 90 QILCRSGKFEVVLGLL------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+C+ G L LL I + V+Y+ +ID K G A + EM +
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-QEKG 285
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+ P TY+S++ G + +++++ M+E+K+ P + + +I GK +
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD--VVTYNALINAFVKEGKFFE 343
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A ++ I T M+ K+ R+ A +++L++ +G + + ++
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C + ++ LL ++ RG + + + + C G +L ++ G+
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-----------DVATYDVLLDGLFK 372
D C++L++ C N ++ A+ + ++K K L DV TY++L+ GL
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+G+ EA +++ M +V + ++ ++ LC L +A + M P+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583
Query: 432 YKQVISGF 439
+ +I+G+
Sbjct: 584 FNTLINGY 591
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 206/467 (44%), Gaps = 75/467 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D KG + L + R M V +P V +A++D+L + A L+ M
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 77 GVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ P+ FT++ + C SG++ +++ +L+ I V+ YN +I+ + K+G F A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL------------ 179
+ +EM R + P TY+S++DG + ++ + ++ + LM K
Sbjct: 345 AELYDEMLP-RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 180 -----------------LPKHFLSGN----DYVIQKLSDMGKTYAA-----EMIFKRACD 213
+P+ L N + +I +G AA +MI C
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ + TC +L L G++K+A++++ + + + + S +
Sbjct: 464 DIV-----TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN------------- 505
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
G+ DV+ + C + +GK+ E EEL + +G++ D+ SS+++
Sbjct: 506 --GVEPDVLTYNILICGL---------INEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C ++D+A + + + S +V T++ L++G K GR+++ + +F M +V+
Sbjct: 555 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ + + A+ EM+ G PD T + +++GF
Sbjct: 615 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 204/440 (46%), Gaps = 45/440 (10%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
RD A+S L+L ++ G L V+ M G P++ +CN LL+ L + + +
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVID 120
A+ +YG M GV P++FT +++A+ CR G+ E V + G+ + V Y+ V+D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y G + R+ E + L+P TY+ ++ G + + E ++R+V M E
Sbjct: 262 CYCGMG-WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET--- 317
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
D V+ +++ G M+ + GR+ +A
Sbjct: 318 -------GDIVVDEVA--------------------------YGMMINGYCQRGRMDDAT 344
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + + GI V Y +N LCK + EEV +L+++ + G P + +
Sbjct: 345 RVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGY 404
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C +G ++ E+ ++ GL + ++L++ +CS ID A+ L + K + +
Sbjct: 405 CREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464
Query: 361 ATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ LLDGLFK G+ E+A+ ++ + + + +F V++ LC + + +A + D
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524
Query: 420 MLKMGHKPDEATYKQVISGF 439
M ++ PD TY+ + G+
Sbjct: 525 MKELRCPPDSLTYRTLFDGY 544
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 177/449 (39%), Gaps = 66/449 (14%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L ++ +M G P +C+ LLD L++ + A L+ + G++ N T++ V
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506
Query: 90 QILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ G+ LLD S+ Y + D Y K G G A +N+M
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM-EHLGF 565
Query: 145 TPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P ++S + G A+++ K V+D I M + L P G +I G
Sbjct: 566 APSVEMFNSFITGHFIAKQWHK--VND-IHSEMSARGLSPNLVTYG--ALIAGWCKEGNL 620
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI--------------------- 240
+ A ++ + + C ++ KEG+V EA
Sbjct: 621 HEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIE 680
Query: 241 --QIYHLISERGITVRDSDYYA---FVNV----LCKEHQPEEVCGLLRDVVERGYIPCAM 291
+I H++ T+ D + ++ NV LCK + + L + + ++P
Sbjct: 681 IDKISHVVD----TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
S + G E L +L GL + +SL+ C + ++ +A+ L K+
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELR 411
+ S + TY+ L+D K+G+ EA ++ M E +
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY------------------ME 838
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+A+K D+M++ P+ TY +I G++
Sbjct: 839 EAIKLLDQMIENNVDPNYITYCTLIHGYI 867
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 29/364 (7%)
Query: 55 DALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY 110
DA +NE+R A G+ N F ++ + LC+ G+ E V +L D G+
Sbjct: 342 DATRVRNEMRDA----------GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMR 391
Query: 111 S-SVMYNLVIDFYSKKGDFGAAFDRLNEMC-----NGRNLTPGFSTYSSILDGARRYEKT 164
YN +ID Y ++G AF EMC NG L TY+++L G
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAF----EMCRMMVRNG--LAATTLTYNTLLKGFCSLHAI 445
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + R+ LM+++ + P ++ L GKT A ++K + T
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCST--LLDGLFKAGKTEQALNLWKETLARGLAKNVITFN 503
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ L K GR+ EA ++ + E Y + CK Q L+ +
Sbjct: 504 TVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G+ P + F+ +W +V ++ S + +GL + +L+ +C + +A
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF-VIVVSR 403
L+ ++ + +V L+ +K+G+++EA + + + ++ S I + +
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDK 683
Query: 404 LCHL 407
+ H+
Sbjct: 684 ISHV 687
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D ++ +R F+P ++L+ I A L M+ G++PN T+
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC+SGK + L + GI + + YN +ID Y K+G AF +M
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833
Query: 141 G---------------RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
N+ P + TY +++ G + E ++ M + LLP +++
Sbjct: 834 EGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 893
Query: 186 SGN 188
GN
Sbjct: 894 -GN 895
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 50/303 (16%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+++ M G P + AL+ ++ + A LY MV +G++PN F S +
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649
Query: 93 CRSGKFE------------------------------VVLGLLDSGIYSS-VMYNLVIDF 121
+ GK + VV + D +S+ VM+N++I
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G A + N R L F TYSS++ G + + + +M+ L P
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNF-TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTP 768
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR------ 235
+ ++ N +I L GK A +F + + I T ++ KEG+
Sbjct: 769 -NIITYNS-LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826
Query: 236 ----------VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++EAI++ + E + Y ++ K EE+ L ++ RG
Sbjct: 827 LKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 886
Query: 286 YIP 288
+P
Sbjct: 887 LLP 889
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 198/443 (44%), Gaps = 13/443 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+ + L+L Y G+ +G + + G+VP+V ACN LL+ L + N I
Sbjct: 175 CQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIH 234
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVI 119
L +YG M R GV PN +T++++ + C+ G + + L + G ++ YN +I
Sbjct: 235 LCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLI 294
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ Y +G AF L + R + P +Y+++++G + + + +++ MV + L
Sbjct: 295 NGYCGRGRLSDAF-YLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGL 353
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + +I GK ++ + I TC +++ KEG + A
Sbjct: 354 NPD--VVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISA 411
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + + G+++ Y V LC+E +P LL + +RGYIP ++ + S
Sbjct: 412 LNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIES 471
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C + L + ++ + + +L+ C + +A L ++ D
Sbjct: 472 LCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPD 531
Query: 360 VATYDVLLDGLFKD---GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKN 416
++ G ++ G+ E + +F KE ++ S S+ +V +C ++ K M+
Sbjct: 532 PEICRAMIHGYCREKDAGKAESLLVLF--AKEFQIFDSESYSTLVRIVCEDGDVAKFMEL 589
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
+ MLK+G P+ T K +I G
Sbjct: 590 QERMLKVGFAPNSLTCKYMIDGL 612
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 152/387 (39%), Gaps = 34/387 (8%)
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----------------------YSSVM 114
G+ P+ + L+ +L S +FE + L I + ++
Sbjct: 125 GLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDCNWDPII 184
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
++L++ Y K G F ++ P + +L+G + + + G M
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILE-VGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEM 243
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
++P N Y L+ + G ++ +E E T ++
Sbjct: 244 GRVGVIP------NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGY 297
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
GR+ +A +Y ++ R + Y A +N LCKE + E LL +V RG P
Sbjct: 298 CGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDV 357
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + + C +GK E + LL ++ G+ DSF C L++ Y + A+ L ++
Sbjct: 358 VSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVE 417
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKE 409
+EK S+ YD L+ L ++ R A + + M + + + ++ LC
Sbjct: 418 LEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDC 477
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A+ E++ P+ TYK +I
Sbjct: 478 VADALSLKAEIVVGNINPNLLTYKALI 504
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 201/505 (39%), Gaps = 84/505 (16%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++L Y KGL + L V+ M G +P++ +CN+LL+ L + E A +Y M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDF 128
+R G+ P+ F S++ C+ GK + G + + G+ + V Y+ +I+ Y GD
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 129 GAAFDRLNEMCN---GRN--------------------------------LTPGFSTYSS 153
AA L M RN L P Y
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++DG R K + + R++ M+ L F+ + +I G+ + AE + R D
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS--LINGYCKRGEIHEAEGVITRMVD 395
Query: 214 -----------------------------------EKIELQDDTCGCMLKALSKEGRVKE 238
E IE T +LK L + G +
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+QI+HL+ +RG+ + Y ++ L K E L +D++ RG+ + + ++
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK E EE+ + D G D +L++ YC + +A + +E+ S
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAM 414
+ Y+ L+ GLFK R+ V + D + E+ + + ++ L C L KA
Sbjct: 576 SIEMYNSLISGLFKSRRL---VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
++ EM + G + ++SG
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGL 657
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 185/428 (43%), Gaps = 28/428 (6%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F D L+++ +M G P + LLD L++ AS L+ ++ G + ++ T+
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC+ GK E+ + D G + Y +ID Y K + G AF M
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM-E 569
Query: 141 GRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
++P Y+S++ G + + EV+D + + + L+ N L D
Sbjct: 570 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG-------LTPNIVTYGALID-- 620
Query: 200 KTYAAEMIFKRACDEKIELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ E + +A E+ ++ C M+ L + GR+ EA + + + G
Sbjct: 621 -GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
D+ F+ + +++ L + + +P + + +A C GK +
Sbjct: 680 ---PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
S + KG + D+F +L+ Y + +D+A L ++ + ++ TY+ L++GL K
Sbjct: 737 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
++ A R+F + + + + ++ ++ C + + A K D+M++ G P T
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVT 856
Query: 432 YKQVISGF 439
Y +I+G
Sbjct: 857 YSALINGL 864
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 191/468 (40%), Gaps = 49/468 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A +++D Y G D + + M G + CN+L++ ++ EI A + M
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
V + P+ ++++ + CR G F + +L GI +V+ YN ++ + G F
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + M R + P YS++LDG + E E + + K +L + F
Sbjct: 454 DDALQIWHLMMK-RGVAPDEVGYSTLLDGLFKMENFEGASTL-----WKDILARGFTKSR 507
Query: 189 ---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I L MGK AE IF + D T ++ K V +A ++
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ I+ Y + ++ L K + EV LL ++ RG P + + C +G
Sbjct: 568 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK--------------- 350
+ + + GL + CS+++ +ID+A L K
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 351 -------IEKLKGSLDVA----------TYDVLLDGLFKDGRMEEAVRIFDYMKELK--V 391
I+K+ SLD + Y++ + GL K G++++A R F M LK V
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFV 746
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ + +A + DEML+ G P+ TY +I+G
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 41/187 (21%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + M G VP + NAL++ L + + A L+ + + G+ PN
Sbjct: 759 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 818
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
T YN +ID Y K G+ AAF ++M
Sbjct: 819 VVT------------------------------YNTLIDGYCKIGNMDAAFKLKDKMIE- 847
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK----------KLLPKHFLSGNDYV 191
++P TYS++++G ++ E S +++ M++ L+ + SG
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQK 907
Query: 192 IQKLSDM 198
I KL DM
Sbjct: 908 IHKLYDM 914
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 187/406 (46%), Gaps = 23/406 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G V + ACNA +D L + R A L+ M G+ PN+ T++++ LC+ G E
Sbjct: 46 GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDA 105
Query: 102 LGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L + D GI +V YN +I+ Y K +F A LNEM + LTP ++YS ++
Sbjct: 106 LCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMV-AKGLTPSPASYSPLIA 164
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQKLSDMGKTYAAEMIFKRAC 212
G R + M + + ++ +SGN Y +I G A +F +
Sbjct: 165 GLCR------KGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMM 218
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + + T M++ + G +++A Q+Y + +RG+T + Y + ++V+C
Sbjct: 219 ESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAM 278
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + D+ + + L+ + C +G E L +L L +S+ + +
Sbjct: 279 KAKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEMLAGHFLPNSYTYNCFL 335
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+Y + +++KA LH + L+G L + T++ L+ G G+++ A+ + E
Sbjct: 336 DYLANEGELEKAKVLHAAM--LEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGF 393
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
S+ +++ LC + + KA + +EML G KPD Y +I
Sbjct: 394 FPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILI 439
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C + L K+GR +EA +++ +++RG+ + Y ++ LCK E+ + +
Sbjct: 54 CNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMR 113
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E+G + + C + + LL+ ++ KGL S L+ C +
Sbjct: 114 EKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLA 173
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A+ LH ++ + S +V T+ L+ G KDG M+EA R+F M E +V + +F +++
Sbjct: 174 SAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMI 233
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
C + +RKA + +D+ML G PD TY+ +IS
Sbjct: 234 EGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLIS 269
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 24/322 (7%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P+ ++ + L+ L R+ ++ A L+ M R+ VS N +T++ + C+ G
Sbjct: 147 MVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGN 206
Query: 98 FEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ L + SS V +N++I+ Y + G+ AF ++M + R LTP TY
Sbjct: 207 MDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLD-RGLTPDNYTYR 265
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG------KTYAAEM 206
S++ V +G M K+ + L N V+ S K +AE+
Sbjct: 266 SLIS---------VVCLTLGAMKAKEFVAD--LENNCAVLNSFSLTALMHGFCKEGSAEI 314
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ K T C L L+ EG +++A ++ H G + + C
Sbjct: 315 LCKEMLAGHFLPNSYTYNCFLDYLANEGELEKA-KVLHAAMLEGCLANTVTFNTLIKGFC 373
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
Q + L++ E G+ P + S + C G + EL + +L KGL D
Sbjct: 374 MAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIV 433
Query: 327 CCSSLMEYYCSNRQIDKAIALH 348
+ L+ + + + DK + ++
Sbjct: 434 AYTILIRWCNIHGEFDKGLGIY 455
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 196/409 (47%), Gaps = 12/409 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E + + YGF ++++CN LL AL ++N+I +Y M++ + N T+++ L
Sbjct: 151 EAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGL 210
Query: 93 CRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDR---LNEMCNGRNL 144
CR+GK + + + GI +V+ YN ++D Y K+G G + + EM + +
Sbjct: 211 CRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK-I 269
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+++++DG + E + + M ++ L P + + +I L + GK A
Sbjct: 270 CPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN--IVTYNSLINGLCNNGKLEEA 327
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ + ++ T ++ K+ +KEA +++ +S++ + + ++
Sbjct: 328 IDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDA 387
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CKE EE L +++ G +P + +A C K + +ELL+ + +KGL D
Sbjct: 388 YCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD 447
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ L++ C N + A L ++ L + TY+ L+DG +G+++ A+ +
Sbjct: 448 VVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRT 507
Query: 385 YM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
M KE K + ++ +++ C + +L A +EML+ G P+ TY
Sbjct: 508 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 138/296 (46%), Gaps = 5/296 (1%)
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+S S LD + EK VS L+++ L + V+ + ++ + + A
Sbjct: 94 YSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNL-ELHCAYEA 152
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F RA D +L +C +L AL KE ++ + +Y + +R I + + F+N LC+
Sbjct: 153 FTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCR 212
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK---GKWKEVEELLSAVLDKGLLLD 324
+ + + D+ G P + + V C + GK + E + +L + +
Sbjct: 213 AGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPN 272
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L++ +C + + A +++K ++ TY+ L++GL +G++EEA+ ++D
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M L + + ++ +++ C K +++A K D++ K P+ T+ +I +
Sbjct: 333 KMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+ G + ++++ M G P + NAL++ ++ ++ A+ ++ + + + PN
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379
Query: 84 TWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + C+ G F + +LD GI +V YN +I +K D AA + LNEM
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
N + L TY+ ++DG + +K+ +++++ M L P H
Sbjct: 440 EN-KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHV-------------- 484
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
TY L D C EG++K A+ + + + Y
Sbjct: 485 --TYNT-------------LMDGYC--------MEGKLKAALNVRTRMEKERKQPNVVTY 521
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ CK ++ E GLL +++E+G P
Sbjct: 522 NVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + K + + +V+ + VP V N ++DA ++ + L +M+ +G
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
+ PN T++ + LCR + LL+ G+ V+ YN++ID K A
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG 157
LNEM N L P TY++++DG
Sbjct: 469 KLLNEMFN-LGLKPNHVTYNTLMDG 492
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 204/440 (46%), Gaps = 45/440 (10%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
RD A+S L+L ++ G L V+ M G P++ +CN LL+ L + + +
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVID 120
A+ +YG M GV P++FT +++A+ CR G+ E V + G+ + V Y+ V+D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y G + R+ E + L+P TY+ ++ G + + E ++R+V M E
Sbjct: 262 CYCGMG-WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET--- 317
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
D V+ +++ G M+ + GR+ +A
Sbjct: 318 -------GDIVVDEVA--------------------------YGMMINGYCQRGRMDDAT 344
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + + GI V Y +N LCK + EEV +L+++ + G P + +
Sbjct: 345 RVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGY 404
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C +G ++ E+ ++ GL + ++L++ +CS ID A+ L + K + +
Sbjct: 405 CREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464
Query: 361 ATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ LLDGLFK G+ E+A+ ++ + + + +F V++ LC + + +A + D
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524
Query: 420 MLKMGHKPDEATYKQVISGF 439
M ++ PD TY+ + G+
Sbjct: 525 MKELRCPPDSLTYRTLFDGY 544
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 186/450 (41%), Gaps = 49/450 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L ++ +M G P +C+ LLD L++ + A L+ + G++ N T++ V
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506
Query: 90 QILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ G+ LLD S+ Y + D Y K G G A +N+M
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM-EHLGF 565
Query: 145 TPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P ++S + G A+++ K V+D I M + L P G +I G
Sbjct: 566 APSVEMFNSFITGHFIAKQWHK--VND-IHSEMSARGLSPNLVTYG--ALIAGWCKEGNL 620
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI--------------------- 240
+ A ++ + + C ++ KEG+V EA
Sbjct: 621 HEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIE 680
Query: 241 --QIYHLISERGITVRDSDYYA---FVNV----LCKEHQPEEVCGLLRDVVERGYIPCAM 291
+I H++ T+ D + ++ NV LCK + + L + + ++P
Sbjct: 681 IDKISHVVD----TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
S + G E L +L GL + +SL+ C + ++ +A+ L K+
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
+ S + TY+ L+D K+G+ EA ++ M E + + ++ I++ LC +
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYM 856
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+A+K D+M++ P+ TY +I G++
Sbjct: 857 EEAIKLLDQMIENNVDPNYITYCTLIHGYI 886
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 29/364 (7%)
Query: 55 DALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY 110
DA +NE+R A G+ N F ++ + LC+ G+ E V +L D G+
Sbjct: 342 DATRVRNEMRDA----------GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMR 391
Query: 111 S-SVMYNLVIDFYSKKGDFGAAFDRLNEMC-----NGRNLTPGFSTYSSILDGARRYEKT 164
YN +ID Y ++G AF EMC NG L TY+++L G
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAF----EMCRMMVRNG--LAATTLTYNTLLKGFCSLHAI 445
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + R+ LM+++ + P ++ L GKT A ++K + T
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCST--LLDGLFKAGKTEQALNLWKETLARGLAKNVITFN 503
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ L K GR+ EA ++ + E Y + CK Q L+ +
Sbjct: 504 TVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G+ P + F+ +W +V ++ S + +GL + +L+ +C + +A
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF-VIVVSR 403
L+ ++ + +V L+ +K+G+++EA + + + ++ S I + +
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDK 683
Query: 404 LCHL 407
+ H+
Sbjct: 684 ISHV 687
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL+ C + G + + +M G P + N+L+ L + ++ A L+ +
Sbjct: 740 SLIHGCAA-SGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+SPN T++ + C+ GK F++ +++ GI +V+ Y+++I +G
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L++M N+ P + TY +++ G + E ++ M + LLP +++ GN
Sbjct: 859 AIKLLDQMIE-NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI-GN 914
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 16/187 (8%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D ++ +R F+P ++L+ I A L M+ G++PN T+
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 86 SLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC+SGK + L + GI + + YN +ID Y K+G AF +M
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL----------SGNDY 190
+ P TYS ++ G E + +++ M+E + P + SGN
Sbjct: 834 -EGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 892
Query: 191 VIQKLSD 197
I KL D
Sbjct: 893 EISKLYD 899
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 196/421 (46%), Gaps = 11/421 (2%)
Query: 1 MIQSCEGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ + G+ + +A+S V+ + + ++ ++ M G P + N L+ L
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM 114
++ ++ + L+ +++ GV PN FT+++ Q LCR G + LL+S G+ V+
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I + K A L++M N + P TY++I++G + + +D+I+
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRD 346
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ K +P F + +I L + G A +F A ++ + ++K LSK+
Sbjct: 347 AMFKGFIPDEFTYSS--LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G V +A+Q+ + E G + Y VN LCK + G+L D + +G IP
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTF 464
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C + + E+L +L G+ D ++L+ C R++D + + +
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRK 412
+ ++ TY++L++ KD ++ EA+ +F MK + + ++ LC EL K
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK 584
Query: 413 A 413
A
Sbjct: 585 A 585
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 182/424 (42%), Gaps = 9/424 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + + V+ M Y P+V + NA+++ L A +Y M G+ P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+T ++ + C +G+ L LL++ +++V Y VI + K+ A+ +
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + + P T++ ++ + + S+++ ++++ + P F + IQ L
Sbjct: 206 EMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF--NIFIQGLC 262
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A + + E + + ++ K ++ EA H + G+ +
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +N CK + +LRD + +G+IP S + C G +
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
++KG ++L++ + +A+ L + + S D+ TY+++++GL K G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 377 EEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A I D + + + +F ++ C + + KA++ D ML G PD TY +
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 436 ISGF 439
++G
Sbjct: 503 LNGL 506
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 148/351 (42%), Gaps = 9/351 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V + N L+ + +++ A C MV GV PN+FT++ + C++G +
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 102 LGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+L ++ + Y+ +I+ GD A E + Y++++
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME-KGFKHSIILYNTLVK 399
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + +++ M+E P + + V+ L MG A I A +
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPD--IWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ K+ + +AI+I + GIT Y +N LCK + + V
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++E+G P + + + S C K E EL + +GL D +L+ C
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 337 SNRQIDKAIALHIKIEK-LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SN ++DKA L + IEK K S A ++++++ + + A ++F M
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIF---KRACDEKIELQDDTCGCMLKALSKEGRVKE 238
KH L +I+KL GK A E + ++ D K+ L+ G M + ++G+V+E
Sbjct: 37 KHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKM-LEGVYIGIM-RDYGRKGKVQE 94
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKE---HQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ ++ + Y A +N+L + Q +V ++D+ G P +
Sbjct: 95 AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI---GIYPDVYTHTI 151
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFC-CSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ S C G+ LL+ + +G ++ C+ + +Y N QI+ A H+ E L
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE---AYHLFDEML 208
Query: 355 KGSL--DVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELR 411
K + D+ T++ L+ L K G ++E+ ++F MK + +F I + LC +
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A + + ++ G PD +Y +I GF
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGF 296
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 158/395 (40%), Gaps = 60/395 (15%)
Query: 25 KGLFMDGLEVYRMMRVY------GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
GL DG ++ R M V+ GF ++ N L+ L +Q + A L M+ G
Sbjct: 364 NGLCNDG-DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFD 133
SP+ +T++LV LC+ G G+L+ I + +N +ID Y K+ + A +
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
L+ M + +TP TY+++L+G + K + M+EK P + + +I+
Sbjct: 483 ILDTMLS-HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN--IITYNILIE 539
Query: 194 KLSDMGKTYAAEMIFKRA-----CDEKIELQDDTCG------------------------ 224
K A +FK + + L CG
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599
Query: 225 -------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
M+ A ++ V A +++H + + Y ++ CK +
Sbjct: 600 YSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTF 659
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L + + +G +P + + C + E +++ ++ G++ + +S+ E +
Sbjct: 660 LLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIFE---A 714
Query: 338 NRQIDKAIALHIKIEKL--KGSLDVATYDVLLDGL 370
+++ + A I +E L K + +Y++L DG+
Sbjct: 715 DKK--EVAAPKIVVEYLLKKSHITYYSYELLYDGI 747
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 206/444 (46%), Gaps = 14/444 (3%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I C+ S +++ Y++ F G E ++ YG+ + +C L+ AL +QN
Sbjct: 143 ISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQN 202
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-DSGIY----SSVMYN 116
LY M+R + PN FT+++V LC++GK ++ D +Y + V YN
Sbjct: 203 RSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYN 262
Query: 117 LVIDFYSKKGDFGAAFDR---LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
+ID Y K G G + L EM ++P +T++ ++DG + + S ++
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENE-VSPNLTTFNILIDGFWKDDNLPGSLKVFKE 321
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+++ ++P + ++ N +I L + GK A + + ++ T ++ K
Sbjct: 322 MLDQDVIP-NVITYNS-LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G +KEA+ ++ + +G Y ++ CK + ++ L ++ G +P
Sbjct: 380 GMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ +A C G + ++L + +KG L D LME YCS + KA L ++ K
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSK 498
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV-VSSSSFVIVVSRLCHLKELR 411
+ TY++++ G K+G ++ A + M KE ++ ++ +S+ +++ +L
Sbjct: 499 MGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 412 KAMKNHDEMLKMGHKPDEATYKQV 435
A +EML+ G P+ TY+ V
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIV 582
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 204/479 (42%), Gaps = 57/479 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D V++ Y GL L+++ +R +G P V N LLDA+ +N ++
Sbjct: 108 EGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQM 167
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVID 120
+Y M RDG PN +T++++ + LC++ + + LL + G V+ Y VI
Sbjct: 168 IEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVIS 227
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
SK G A + P S Y+++++G R K + ++G MVEK +
Sbjct: 228 SMSKLGKVEEAREL------SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGID 281
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMI----FKRACDEKIELQDDTCGCMLKALSKEGRV 236
P VI LS +G A + F R C + T ++K GRV
Sbjct: 282 PNVITYST--VISSLSGIGNVELALAVWAKMFVRGCSPNVY----TFTSLMKGYFMRGRV 335
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC------------------GLL 278
EA+ I++ ++E G Y ++ LC + E G L
Sbjct: 336 LEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGAL 395
Query: 279 RD-----------------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
D ++ G IP + + V C + + L+ +
Sbjct: 396 IDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
++ ++ ++ C + +++ AI L ++E+ S ++ TY+ +LDGL K+ R++EA+
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALE 515
Query: 382 IFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M+E + ++ ++ + C++ + +A+K +ML G KPD TY + +
Sbjct: 516 LVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 153/393 (38%), Gaps = 60/393 (15%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
F P VS NAL++ R+ +++ L G MV G+ PN T+S V L G E+ L
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304
Query: 103 GLL--------DSGIYS--------------------------------SVMYNLVIDFY 122
+ +Y+ V YN +I
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364
Query: 123 SKKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G G A ++M RN +P STY +++DG + + I M+ +P
Sbjct: 365 CSHGKMGEAVSVSSKM--ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-------GCMLKALSKEG 234
+ + M +F +A ++ D C +K L G
Sbjct: 423 N---------VVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG 473
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
RV+ AI ++ + + G + Y ++ L KE++ +E L+ ++ E+G + +
Sbjct: 474 RVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYN 533
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
C GK++E +LL +L G+ D+ ++L YC ++ AI L K+
Sbjct: 534 TIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAG 593
Query: 355 -KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
K +VA Y LL G+ +EEAV D M
Sbjct: 594 GKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKM 626
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 163/390 (41%), Gaps = 19/390 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D S V+ S G L V+ M V G P V +L+ + + +
Sbjct: 278 KGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLE 337
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVID 120
A ++ M +G PN ++ + LC GK V + +G +V Y +ID
Sbjct: 338 ALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALID 397
Query: 121 FYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
++K GD A + N+M NG P Y+S+++ R + ++ M
Sbjct: 398 GFAKAGDLVGASEIWNKMMTNG--CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIF----KRACDEKIELQDDTCGCMLKALSKEGR 235
P + ++ N + I+ L G+ A +F + C I+ ++ +L L KE R
Sbjct: 456 -PPNTVTFNTF-IKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE----VLDGLLKENR 509
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+KEA+++ + E+G+ + Y C + EE LL ++ G P A+ +
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC-SSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C +GK K +LL + G + +SL+ C+ +++A+ K+
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
L+ AT++ L+ GLF + I D
Sbjct: 630 GICLNAATWNALVRGLFNSLGHLGPIHILD 659
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 184/409 (44%), Gaps = 9/409 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M ++G V + N L++ L R + + A + G M + G+ P+ T++ + LC GK
Sbjct: 122 MDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGK 181
Query: 98 FEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ +GL + ++S + YN VI+ K G+ A +M R P TY+
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG-KPNVVTYN 240
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+I+D + + + MV++ + P + + ++ +G+ A +FK
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVDRGIPPD--VVTYNTILHGFCSLGQLNEATRLFKEMV 298
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T ++ L KEG V EA + ++E+G Y A ++ C +Q +
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E +L ++ +G P + + C + E + LLS + +K L D+ S+LM
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C + +A+ L ++ D+ Y +LLDG K G ++EA+++ M E ++
Sbjct: 419 QGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478
Query: 393 SSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + I++ + +L A + ++ G +PD TY +I G +
Sbjct: 479 PNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 189/433 (43%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+++++C + V M G P N L++ L + +I+ A L+ M
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
V G PN +++ V LC++G + + + + G + V YN +ID K
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + L+EM + R + P TY++IL G + + R+ MV + ++P
Sbjct: 253 NEAVEFLSEMVD-RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF-- 309
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L G A + + ++ E T ++ ++ EAI++ ++
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G S Y +N CK + E LL ++ E+ P + S + C G+ +E
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + GLL D S L++ +C + +D+A+ L ++ + + ++ Y +L+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+F G++E A +F + + ++ +++ L +A + +M G P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549
Query: 428 DEATYKQVISGFM 440
D +Y +I GF+
Sbjct: 550 DSCSYNVIIQGFL 562
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 177/412 (42%), Gaps = 47/412 (11%)
Query: 35 YRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
YRM+R+ P+V L ++ ++ + A L M GV+ N ++ +++ LCR
Sbjct: 85 YRMVRM-NPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR 143
Query: 95 SGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ + ++ GI ++ +N +I+ +G A NEM + P
Sbjct: 144 LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH-EPNVI 202
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+Y+++++G L G T A +F+
Sbjct: 203 SYNTVING-------------------------------------LCKNGNTIMAVRVFR 225
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + + T ++ +L K+ V EA++ + +RGI Y ++ C
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLG 285
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
Q E L +++V R +P + + V C +G E + + +KG +++ +
Sbjct: 286 QLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYN 345
Query: 330 SLMEYYCSNRQIDKAI-ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+LM+ YC + Q+D+AI L I I K + ++++Y++L++G K RM EA R+ M E
Sbjct: 346 ALMDGYCLHNQMDEAIKVLGIMIGK-GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ LC + R+A+ EM G PD Y ++ GF
Sbjct: 405 KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 182/423 (43%), Gaps = 9/423 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + V++ G + + V+R M P V N ++D+L + + A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
MV G+ P+ T++ + C G+ L + +VM +N+++D
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K+G A ++E + P TY++++DG + + + + +++G+M+ K P
Sbjct: 316 LCKEGMVSEA-RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
LS + +I + A+ + ++ + T +++ L + GR +EA+
Sbjct: 375 N--LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + G+ Y ++ CK +E LL+++ ER P + + +
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK + +EL S + G+ D + + +++ D+A K+E D
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKNHDEM 420
+Y+V++ G ++ A+++ D M + + SS+F +++ H + + + M+ +
Sbjct: 553 SYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEIISRFMRGSSQH 612
Query: 421 LKM 423
KM
Sbjct: 613 TKM 615
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 109/281 (38%), Gaps = 33/281 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + ++D Y + ++V +M G P +S+ N L++ + +
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M ++P+ T+S + Q LC+ G+ L L
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK------------------- 435
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
EMC+ L P YS +LDG ++ + + +++ M E+++ P L
Sbjct: 436 -----------EMCSS-GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIIL 483
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I+ + GK A+ +F + + I T M+K L KEG EA + +
Sbjct: 484 Y--TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ + G Y + + L+ ++V + +
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRF 582
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 196/421 (46%), Gaps = 11/421 (2%)
Query: 1 MIQSCEGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ + G+ + +A+S V+ + + ++ ++ M G P + N L+ L
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM 114
++ ++ + L+ +++ GV PN FT+++ Q LCR G + LL+S G+ V+
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I + K A L++M N + P TY++I++G + + +D+I+
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRD 346
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ K +P F + +I L + G A +F A ++ + ++K LSK+
Sbjct: 347 AMFKGFIPDEFTYSS--LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G V +A+Q+ + E G + Y VN LCK + G+L D + +G IP
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTF 464
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C + + E+L +L G+ D ++L+ C R++D + + +
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRK 412
+ ++ TY++L++ KD ++ EA+ +F MK + + ++ LC EL K
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK 584
Query: 413 A 413
A
Sbjct: 585 A 585
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 182/424 (42%), Gaps = 9/424 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + + V+ M Y P+V + NA+++ L A +Y M G+ P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+T ++ + C +G+ L LL++ +++V Y VI + K+ A+ +
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + + P T++ ++ + + S+++ ++++ + P F + IQ L
Sbjct: 206 EMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF--NIFIQGLC 262
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A + + E + + ++ K ++ EA H + G+ +
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +N CK + +LRD + +G+IP S + C G +
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
++KG ++L++ + +A+ L + + S D+ TY+++++GL K G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 377 EEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A I D + + + +F ++ C + + KA++ D ML G PD TY +
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 436 ISGF 439
++G
Sbjct: 503 LNGL 506
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 147/351 (41%), Gaps = 9/351 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V + N L+ + +++ A C MV GV PN+FT++ + C++G +
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 102 LGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+L ++ + Y+ +I+ GD A E + Y++++
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME-KGFKHSIILYNTLVK 399
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + +++ M+E P + + V+ L MG A I A +
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPD--IWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ K+ + +AI+I + GIT Y +N LCK + + V
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++E+G P + + + S C K E EL + +GL D +L+ C
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 337 SNRQIDKAIALHIKIEK-LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SN ++DKA L + IEK K S A ++++++ + A ++F M
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIF---KRACDEKIELQDDTCGCMLKALSKEGRVKE 238
KH L +I+KL GK A E + ++ D K+ L+ G M + ++G+V+E
Sbjct: 37 KHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKM-LEGVYIGIM-RDYGRKGKVQE 94
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKE---HQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ ++ + Y A +N+L + Q +V ++D+ G P +
Sbjct: 95 AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI---GIYPDVYTHTI 151
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFC-CSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ S C G+ LL+ + +G ++ C+ + +Y N QI+ A H+ E L
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE---AYHLFDEML 208
Query: 355 KGSL--DVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELR 411
K + D+ T++ L+ L K G ++E+ ++F MK + +F I + LC +
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A + + ++ G PD +Y +I GF
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGF 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 157/394 (39%), Gaps = 60/394 (15%)
Query: 26 GLFMDGLEVYRMMRVY------GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
GL DG ++ R M V+ GF ++ N L+ L +Q + A L M+ G S
Sbjct: 365 GLCNDG-DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDR 134
P+ +T++LV LC+ G G+L+ I + +N +ID Y K+ + A +
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L+ M + +TP TY+++L+G + K + M+EK P + + +I+
Sbjct: 484 LDTMLS-HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN--IITYNILIES 540
Query: 195 LSDMGKTYAAEMIFKRA-----CDEKIELQDDTCG------------------------- 224
K A +FK + + L CG
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600
Query: 225 ------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
M+ A + V A +++H + + Y ++ CK + L
Sbjct: 601 STAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFL 660
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ + +G +P + + C + E +++ ++ G++ + +S+ E ++
Sbjct: 661 LENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIFE---AD 715
Query: 339 RQIDKAIALHIKIEKL--KGSLDVATYDVLLDGL 370
++ + A I +E L K + +Y++L DG+
Sbjct: 716 KK--EVAAPKIVVEYLLKKSHITYYSYELLYDGI 747
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 196/478 (41%), Gaps = 54/478 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + G P V N LL L ++ + A L+ M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
PN T++ + LCR G+ + LLD G+ + + Y ++D K GD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A D L +M ++ P YS+I+D + + + + M EK + P F +
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ AE + + + KI T ++ A KEG+ EA ++Y +
Sbjct: 296 --MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+++ + + + +G P + + + CG + +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 309 VEELLSAVLDKGLLLDS-----------------------------------FCCSSLME 333
ELL + + GL+ D+ C +L++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYDVLLDGLFKDGRMEEAVRI 382
C N ++ A+ + ++K K LD V TY++L+ GL +G+ EA +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M +V + ++ ++ LC L +A + D M P+ T+ +I+G+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 197/449 (43%), Gaps = 76/449 (16%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+M + +P V +A++D+L + A L+ M G+ P+ FT++ + C S
Sbjct: 244 KMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303
Query: 96 GKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G++ +++ +L+ I V+ YN +I+ + K+G F A + +EM R + P T
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP-RGIIPNTIT 362
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV---------------IQKL 195
YSS++DG + + + ++ + LM K P + ++ N + + ++
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 196 SDMG-----KTYAA-------------------EMIFKRACDEKIELQDDTCGCMLKALS 231
++ G TY EMI C + + TC +L L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV-----TCDTLLDGLC 476
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
G++K+A++++ ++ + + +D D N G P
Sbjct: 477 DNGKLKDALEMFKVMQK---SKKDLDASHPFN---------------------GVEPDVQ 512
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ ++ +GK+ E EEL + +G++ D+ SS+++ C ++D+A + +
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
S +V T+ L++G K GR+++ + +F M +V+++ +++ ++ + +
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A+ EM+ G PD T + +++G
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 18/358 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G F + E+Y M G +P ++++D +QN + A ++ M G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
SPN T++ + C + + + + LL ++G+ + + YN +I + GD AA
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLSG--- 187
D L EM + L P T ++LDG K + + + +M + K L H +G
Sbjct: 451 DLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 188 ----NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + GK AE +++ I T M+ L K+ R+ EA Q++
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + + +N CK + ++ L ++ RG + A+ +
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G ++ ++ G+ D+ +++ S ++ +A+A+ +EKL+ S+D++
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM---LEKLQMSMDLS 684
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/445 (19%), Positives = 199/445 (44%), Gaps = 14/445 (3%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
+SCE ++L L + KGL D ++++ M +P+V L+ + R
Sbjct: 37 ESCEA-GFGGESLKLQSGFHEIKGL-EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNL 117
L LY M R + + ++++++ + C K L G++ V+ +N
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNT 154
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++ + A + ++M P T++++++G R + + ++ M+E
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGR 235
L P G ++ + +G T +A + R +E + + ++ +L K+GR
Sbjct: 214 GLQPTQITYGT--IVDGMCKIGDTVSA-LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGR 270
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+A ++ + E+GI Y + + C + + LL++++ER P + +
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + +GK+ E EEL +L +G++ ++ SS+++ +C ++D A + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAM 414
S ++ T++ L+DG R+++ + + M E +V+ ++++ ++ + +L A+
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD T ++ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K ++ A+ + I++ G+ + ++ LC E + E L + E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +G+ E LL +++ GL ++++ C A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L K+E++ + +V Y ++D L KDGR +A +F M+E + ++ ++
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C A + EML+ PD TY +I+ F+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 197/437 (45%), Gaps = 9/437 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S +++ Y +G+ D LE++R+M +YGF P+V CNA+L ++ + E
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYS 123
M++ + P+ T++++ +LC G FE L+ SG + V YN V+ +Y
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
KKG F AA + L+ M + + TY+ ++ R + ++ M ++ + P
Sbjct: 240 KKGRFKAAIELLDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I S+ GK A + + T ++ EG KEA++++
Sbjct: 299 VTY--NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+++ +G+T + Y ++ LCK + + G + G + + + C
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G E LL+ + G+ D S+L+ +C + A + +I ++ S + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 364 DVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ + G ++EA+RI++ M E +F ++V+ LC ++ +A + M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 423 MGHKPDEATYKQVISGF 439
G P+ ++ +I+G+
Sbjct: 537 DGILPNTVSFDCLINGY 553
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 168/432 (38%), Gaps = 78/432 (18%)
Query: 33 EVYRMMRVYGFVPAVSAC---NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
E + ++ VPA N LL A+ + + A L+G MV+ + P+ +T++ +
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 90 QILCRSGKFEVVL------------------------GLLDSGIYSSVMY---------- 115
LCR GK + + G+ +G + + +Y
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715
Query: 116 -------NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
N +ID YS+ G D L EM N +N P +TY+ +L G + + S
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSF 774
Query: 169 RIVGLMVEKKLLP-------------------------KHFLSGN--------DYVIQKL 195
+ ++ +LP K F+ + +I K
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+ A + K I L DTC M+ L++ R +E+ + H +S++GI+
Sbjct: 835 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N LC+ + + +++ P + S V + GK E LL
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+L L+ ++LM C N + +A+ L + + LD+ +Y+VL+ GL G
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014
Query: 376 MEEAVRIFDYMK 387
M A +++ MK
Sbjct: 1015 MALAFELYEEMK 1026
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 183/430 (42%), Gaps = 12/430 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ +S++G + ++ M +G P NAL+D + + A ++ M G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
++P++ ++ ++ LC++ +F++ G +G+ + Y +ID K G A
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
LNEM + + P TYS++++G + + + + IV + L P + +I
Sbjct: 424 VLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST--LI 480
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
MG A I++ E T ++ +L K G+V EA + ++ GI
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N + + + ++ + G+ P + C G +E E+
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ +D+ ++L+ C + + KA++L ++ + D TY L+ GL +
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 373 DGRMEEAVRIFDYMKELK---VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G+ A+ +F E + + + + V + + + + ++M +GH PD
Sbjct: 661 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 430 ATYKQVISGF 439
T +I G+
Sbjct: 720 VTTNAMIDGY 729
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 173/431 (40%), Gaps = 18/431 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++++ G + E R M G +P + + L++ E
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVID 120
A ++ M + G P FT+ + + LC+ G L S +VMYN ++
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G+ A EM R++ P TY+S++ G R KT ++ ++ K+
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQ-RSILPDSYTYTSLISGLCRKGKT-----VIAILFAKEAE 675
Query: 181 PKHFLSGNDYVIQKLSD---MGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRV 236
+ + N + D + A + F+ D D T M+ S+ G++
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
++ + + + + Y ++ K L R ++ G +P +
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
V C + ++L A + +G+ +D + + L+ C+N +I+ A L + L
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
SLD T D ++ L ++ R +E+ + M + + S ++ +++ LC + +++ A
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 416 NHDEMLKMGHK 426
+EM+ HK
Sbjct: 916 VKEEMI--AHK 924
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 200/487 (41%), Gaps = 63/487 (12%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNE 62
S +G D S +++ + G F E+ R+ RV G P + L+ R
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-GLSPNGIIYSTLIYNCCRMGC 488
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNL 117
++ A +Y AM+ +G + + FT++++ LC++GK E + + GI ++V ++
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 118 VIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDG---------ARRYEKT--- 164
+I+ Y G+ AF +EM G + P F TY S+L G A ++ K+
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHH--PTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 165 --EVSDRIV---------------------GLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
D ++ G MV++ +LP + + +I L GKT
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS--LISGLCRKGKT 664
Query: 202 YAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A + K A L + C + + K G+ K I + G T A
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE---LLSAVL 317
++ + + E+ LL ++ + P L+ + G K K+V L +++
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGP---NLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRM 376
G+L D C SL+ C + ++ + + +K +G +D T+++L+ +G +
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKI-LKAFICRGVEVDRYTFNMLISKCCANGEI 840
Query: 377 EEAVRIFDYMKELKVV----SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
A + M L + + + V V++R +E R + EM K G P+ Y
Sbjct: 841 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH---EMSKQGISPESRKY 897
Query: 433 KQVISGF 439
+I+G
Sbjct: 898 IGLINGL 904
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 197/437 (45%), Gaps = 9/437 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S +++ Y +G+ D LE++R+M +YGF P+V CNA+L ++ + E
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYS 123
M++ + P+ T++++ +LC G FE L+ SG + V YN V+ +Y
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
KKG F AA + L+ M + + TY+ ++ R + ++ M ++ + P
Sbjct: 240 KKGRFKAAIELLDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I S+ GK A + + T ++ EG KEA++++
Sbjct: 299 VTY--NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+++ +G+T + Y ++ LCK + + G + G + + + C
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G E LL+ + G+ D S+L+ +C + A + +I ++ S + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 364 DVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ + G ++EA+RI++ M E +F ++V+ LC ++ +A + M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 423 MGHKPDEATYKQVISGF 439
G P+ ++ +I+G+
Sbjct: 537 DGILPNTVSFDCLINGY 553
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 161/411 (39%), Gaps = 75/411 (18%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL-------- 102
N LL A+ + + A L+G MV+ + P+ +T++ + LCR GK + +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 103 ----------------GLLDSGIYSSVMY-----------------NLVIDFYSKKGDFG 129
G+ +G + + +Y N +ID YS+ G
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-------- 181
D L EM N +N P +TY+ +L G + + S + ++ +LP
Sbjct: 737 KTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 182 -----------------KHFLSGN--------DYVIQKLSDMGKTYAAEMIFKRACDEKI 216
K F+ + +I K G+ A + K I
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L DTC M+ L++ R +E+ + H +S++GI+ Y +N LC+ +
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ +++ P + S V + GK E LL +L L+ ++LM C
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
N + +A+ L + + LD+ +Y+VL+ GL G M A +++ MK
Sbjct: 976 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 183/430 (42%), Gaps = 12/430 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ +S++G + ++ M +G P NAL+D + + A ++ M G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
++P++ ++ ++ LC++ +F++ G +G+ + Y +ID K G A
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
LNEM + + P TYS++++G + + + + IV + L P + +I
Sbjct: 424 VLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST--LI 480
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
MG A I++ E T ++ +L K G+V EA + ++ GI
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N + + + ++ + G+ P + C G +E E+
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ +D+ ++L+ C + + KA++L ++ + D TY L+ GL +
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 373 DGRMEEAVRIFDYMKELK---VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G+ A+ +F E + + + + V + + + + ++M +GH PD
Sbjct: 661 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 430 ATYKQVISGF 439
T +I G+
Sbjct: 720 VTTNAMIDGY 729
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 174/434 (40%), Gaps = 24/434 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++++ G + E R M G +P + + L++ E
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVID 120
A ++ M + G P FT+ + + LC+ G L S +VMYN ++
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV------GLM 174
K G+ A EM R++ P TY+S++ G R KT ++ G +
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQ-RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKE 233
+ K++ F+ G Q + A + F+ D D T M+ S+
Sbjct: 681 LPNKVMYTCFVDGMFKAGQ--------WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G++++ + + + + Y ++ K L R ++ G +P +
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
V C + ++L A + +G+ +D + + L+ C+N +I+ A L +
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
L SLD T D ++ L ++ R +E+ + M + + S ++ +++ LC + +++
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 413 AMKNHDEMLKMGHK 426
A +EM+ HK
Sbjct: 913 AFVVKEEMI--AHK 924
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 200/487 (41%), Gaps = 63/487 (12%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNE 62
S +G D S +++ + G F E+ R+ RV G P + L+ R
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-GLSPNGIIYSTLIYNCCRMGC 488
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNL 117
++ A +Y AM+ +G + + FT++++ LC++GK E + + GI ++V ++
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 118 VIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDG---------ARRYEKT--- 164
+I+ Y G+ AF +EM G + P F TY S+L G A ++ K+
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHH--PTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 165 --EVSDRIV---------------------GLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
D ++ G MV++ +LP + + +I L GKT
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS--LISGLCRKGKT 664
Query: 202 YAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A + K A L + C + + K G+ K I + G T A
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE---LLSAVL 317
++ + + E+ LL ++ + P L+ + G K K+V L +++
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGP---NLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRM 376
G+L D C SL+ C + ++ + + +K +G +D T+++L+ +G +
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKI-LKAFICRGVEVDRYTFNMLISKCCANGEI 840
Query: 377 EEAVRIFDYMKELKVV----SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
A + M L + + + V V++R +E R + EM K G P+ Y
Sbjct: 841 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH---EMSKQGISPESRKY 897
Query: 433 KQVISGF 439
+I+G
Sbjct: 898 IGLINGL 904
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 183/408 (44%), Gaps = 15/408 (3%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
+ GF + N+LL L R + R A L+ + + P+ ++++V C +G
Sbjct: 70 IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129
Query: 100 VVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSS 153
L LL+ +G + + +I + GD A D L M C+ P TY++
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD-----PNVVTYTA 184
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++ R +K E + +++ M E+ P L + ++ L + AA+ + K+ +
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPN--LVTYNVLVDALCKLSMVGAAQDVVKKMIE 242
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
T ++ K G V +A ++ ++ +G+ Y A ++ LCK + E
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+L ++ RG P A S + C K +E E++L + G D SS++
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+C + ++ +A ++ K + S DV TY+ ++DGL K G++ EA I + M+E V
Sbjct: 363 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVL 422
Query: 394 SS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ V++ LC L +A K D M K G PD TY +I G
Sbjct: 423 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 470
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 180/409 (44%), Gaps = 45/409 (11%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR--- 94
+R G P V AL+ A R ++ A L M G PN T++++ LC+
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229
Query: 95 -SGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+VV +++ G +VM +N ++D + K+G+ A L M + + P TYS
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV-AKGMRPNVVTYS 288
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++DG + +K + ++ M + + P F TY+A
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF----------------TYSA-------- 324
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ L K +++EA Q+ ++ G T Y + ++ CK +
Sbjct: 325 -------------LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG-LLLDSFCCSSL 331
E L+++ ++ P + + + C GK E + +L + + G +L D S++
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ C + + +A L ++ K + DV TY ++DGL K GR+EEA + MK
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 392 VSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++S LC +++ +A + +EM G P+ TY +++G
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 168/365 (46%), Gaps = 9/365 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +++ MR G P + N L+DAL + + + A + M+ G +PN T++ +
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256
Query: 90 QILCRSGKFE---VVLGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ G + +LG++ + G+ +V+ Y+ +ID K F A + L EM R +
Sbjct: 257 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM-KTRGV 315
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TP TYS+++ G + +K E +++++ M P + + +I GK A
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS--IIHAFCKSGKLLEA 373
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVN 263
+ + ++ T ++ L K G++ EA I + E G + D Y +N
Sbjct: 374 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVIN 433
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK E LL + + G P + + + C G+ +E E LL + G
Sbjct: 434 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ ++L+ C R++D+A + ++ ++ TY+ +++GL GR++EA ++
Sbjct: 494 NVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLV 553
Query: 384 DYMKE 388
MK+
Sbjct: 554 QRMKD 558
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 42/376 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + +G D ++ +M G P V +AL+D L + + A + M G
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
V+P+ FT+S + LC++ K E +L SG V+Y+ +I + K G A
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYV 191
L EM R +P TY++++DG + K + I+ M E +LP + V
Sbjct: 375 KTLQEMRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD--VVTYSTV 431
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I L A+ + R C T ++ L K GR++EA + + G
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ LCK + +E ++ ++ G P + + V C G+ KE ++
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 551
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+ +K + + S D ATY +++ L
Sbjct: 552 LVQ---------------------------------RMKDGRAECSPDAATYRTIVNALM 578
Query: 372 KDGRMEEAVRIFDYMK 387
++EA ++ + MK
Sbjct: 579 SSDLVQEAEQLLEQMK 594
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 193/430 (44%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++++C+ + L V M G+ P + ++LL+ I A L M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G PN T++ + L K + L+D + V Y +V++ K+GD
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF+ LN+M G+ L PG Y++I+DG +Y+ + + + M K + P +
Sbjct: 240 AFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS-- 296
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + + KI T ++ A KEG++ EA ++Y + +R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + +V + P + + + C + +E
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E+ + +GL+ ++ + L++ D A + ++ ++ TY+ LLDGL
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G++E+A+ +F+Y++ K+ + ++ I++ +C ++ + G KPD
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 430 ATYKQVISGF 439
Y +ISGF
Sbjct: 537 VAYNTMISGF 546
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 17/440 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + LS +L+ Y H + + + M V G+ P N L+ L+ N+ A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLV 118
L MV G P+ T+ +V LC+ G ++ LL+ G+ ++YN +
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV---LIYNTI 262
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID K A + EM + + P TYSS++ Y + + R++ M+E+K
Sbjct: 263 IDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P F +I GK AE ++ I+ T ++ R+ E
Sbjct: 322 INPDVFTFSA--LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A Q++ + + Y + CK + EE + R++ +RG + + + +
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G +E+ ++ G+ + ++L++ C N +++KA+ + +++ K
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKN 416
+ TY+++++G+ K G++E+ +F + LK V ++ ++S C +A
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 417 HDEMLKMGHKPDEATYKQVI 436
EM + G P+ Y +I
Sbjct: 559 FKEMKEDGTLPNSGCYNTLI 578
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 171/401 (42%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + N+ + L M G+ N +T+S++ CR + + L +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 105 LDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + N+V ++ Y A +++M P T+++++ G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV-TGYQPNTVTFNTLIHGLF 197
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ K + ++ MV K P G V+ L G T A + + K+E
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYG--VVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L K + +A+ ++ + +GI Y + ++ LC + + LL
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D++ER P S + + +GK E E+L ++ + + SSL+ +C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D+A + + DV TY+ L+ G K R+EE + +F M + +V ++ ++
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I++ L + A + EM+ G P+ TY ++ G
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 171/392 (43%), Gaps = 21/392 (5%)
Query: 61 NEIRL--ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSV 113
+E++L A L+G MV+ P+ +S + + + KF+VV+ L + GI ++
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+++I+ + ++ A L +M P T SS+L+G ++ + +V
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M P + +I L K A + R + + T G ++ L K
Sbjct: 177 MFVTGYQPNTVTF--NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G A + + + + + Y ++ LCK ++ L +++ +G P +
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S ++ C G+W + LLS ++++ + D F S+L++ + ++ +A L+ ++ K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR------LCHL 407
+ TY L++G R++EA ++F++M VS F VV+ C
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM-----VSKHCFPDVVTYNTLIKGFCKY 409
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K + + M+ EM + G + TY +I G
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ +N C + E L+ + GY P + + + K E L+ ++ K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G D ++ C D A L K+E+ K V Y+ ++DGL K M++A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 380 VRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ +F M+ VV+ SS ++S LC+ A + +M++ PD T+ +
Sbjct: 276 LNLFKEMETKGIRPNVVTYSS---LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 436 ISGFM 440
I F+
Sbjct: 333 IDAFV 337
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 200/478 (41%), Gaps = 58/478 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + GF P V + LL L ++ + A L+ M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
R PN T++ + LCR G+ + LLD + + + Y ++D K GD
Sbjct: 174 CR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+DG + + + + M EK + P F
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY-- 287
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I G+ A+ + + + KI T ++ A KE + EA ++Y +
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+++ + + + +G P + + CG + +
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407
Query: 309 VEELLSAVLDKGLLLDS---------FC--------------------------CSSLME 333
ELL + + GL+ D+ FC C++L++
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYDVLLDGLFKDGRMEEAVRI 382
C N ++ A+ + ++K K LD V TY++L+ GL +G+ EA +
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEEL 527
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M +V ++ ++ +++ LC L +A + D M PD T+ ++SG+
Sbjct: 528 YKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 198/442 (44%), Gaps = 27/442 (6%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
+ ++L L + KGL D ++++ M +P+V N L+ + R L LY
Sbjct: 42 RGESLKLRSGFHEIKGL-EDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLY 100
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVID 120
M R + + ++++++ + C K L D +S++++ L ++
Sbjct: 101 QKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVE 160
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
A D ++MC P T++++++G R + + ++ MVE L
Sbjct: 161 -----DRVSEALDLFHQMCR-----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQ 210
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKE 238
P G ++ + +G T +A + ++ +E ++ + ++ L K+GR +
Sbjct: 211 PNQITYGT--IVDGMCKIGDTVSALNLLRKM-EEMSHIKPNVVIYSAIIDGLWKDGRHSD 267
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A +Y + E+GI Y ++ C + E LL++++ER P + S +
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ + K+ E EEL +L +G++ ++ +S+++ +C ++D A + + S
Sbjct: 328 AYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP 387
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKNH 417
DV T++ L+DG R+++ + M E +V+ ++++ ++ C + +L A+
Sbjct: 388 DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLS 447
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+M+ G PD T ++ G
Sbjct: 448 QQMISSGVCPDIVTCNTLLDGL 469
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 182/437 (41%), Gaps = 74/437 (16%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +A++D L++ A LY M G+ P+ FT++ + C SG++ L
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306
Query: 105 LDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + + V Y+ +I+ Y K+ F A + +EM R + P TY+S++DG
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP-RGIIPNTITYNSMIDGFC 365
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHF--------------LSGNDYVIQKLSDMG-----K 200
+ + + ++ + +M K P F + ++ ++++ G
Sbjct: 366 KQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTT 425
Query: 201 TY-------------------AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
TY + +MI C + + TC +L L G++K+A++
Sbjct: 426 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV-----TCNTLLDGLCDNGKLKDALE 480
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + + + + S + G P + ++
Sbjct: 481 MFKAMQKSKMDLDASRPF------------------------NGVEPDVQTYNILISGLI 516
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+GK+ E EEL + +G++ ++ SS++ C ++D+A + + S DV
Sbjct: 517 NEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVV 576
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
T++ L+ G K GR+++ + +F M +V+ + +++ ++ + + A+ EM
Sbjct: 577 TFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636
Query: 421 LKMGHKPDEATYKQVIS 437
+ G PD T + +++
Sbjct: 637 ISSGVYPDTITIRSMLT 653
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 130/347 (37%), Gaps = 50/347 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ Y + F + E+Y M G +P N+++D +QN + A ++ M
Sbjct: 323 SALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
G SP+ FT++ + C + + E++ + ++G+ + + YN +I + GD A
Sbjct: 383 KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNA 442
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG--------------------------ARRYEKT 164
A D +M + + P T +++LDG +R +
Sbjct: 443 ALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501
Query: 165 EVSDR-----IVGLMVEKKLL---------PKHFLSGNDY----VIQKLSDMGKTYAAEM 206
E + I GL+ E K L P + N +I L + A
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F + T ++ K GRV + ++++ + RGI Y ++
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
K + ++++ G P + + + K + K +L
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAML 668
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 198/429 (46%), Gaps = 10/429 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ + KG+ + + M+ G VP + N L+ A R I+ A+ + AM G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS--VMYNLVIDFYSKKGDFGAA 131
P+ +T++++A LC++GK + L D GI S V YN ++D K A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L EM + + T++ I+ G R + E + + +M E+ L P + + +
Sbjct: 370 LNLLEEM-REKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPD--VITYNTL 426
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I G A ++ +++ T +L L KE R +EA ++ +RG
Sbjct: 427 IDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGF 486
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y + KE++PE L ++++R P + + GK E +
Sbjct: 487 VPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAID 546
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+ +++ GL+ D + ++ YC ++KA H K+ + DV T + L++GL
Sbjct: 547 KLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLC 606
Query: 372 KDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
GR+E+A+++F+ ++++ K V ++ ++ LC ++ A++ +M G +PD
Sbjct: 607 LYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVF 666
Query: 431 TYKQVISGF 439
TY ++S
Sbjct: 667 TYNVLLSAL 675
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 188/420 (44%), Gaps = 44/420 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCL--YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P++ A NA+L AL R + L + +++ + PN +T++L+ C G L
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229
Query: 103 GLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L G+ +V YN +++ + +KG G A L M + P +TY++++
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM-KKEGIVPTRATYNTLVSA 288
Query: 158 ARRY----EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
R + T+V + + E L + L+ L GK D
Sbjct: 289 YARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAG------LCQAGK-----------VD 331
Query: 214 EKIELQDD------------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
E +L+D+ T ++ A K R +A+ + + E+G+ +
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
V LC+E Q EE G L + E G P + + + + C G + L+ ++ GL
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL 451
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAV 380
+D+F ++L+ C ++ ++A L ++ +G + D +Y ++ FK+ + E A+
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEEL-LRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++D M + K+ S S++ ++ L + +L +A+ +E+++MG PD+ TY +I +
Sbjct: 511 CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAY 570
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 185/446 (41%), Gaps = 46/446 (10%)
Query: 38 MRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M G V P V N L+DA ++ A L M GV + T +++ + LCR G
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399
Query: 97 KFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ E LG L+ G+ V+ YN +ID K G+ AF ++EM L T
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS-GLKMDTFTL 458
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++L + ++ E ++ ++ ++ +P G V+ K A ++
Sbjct: 459 NTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT--VMAAYFKEYKPEPALCLWDEM 516
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
K+ T ++K LS G++ EAI + + E G+ D+ Y ++ CKE
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E+ +VE + P + + + C G+ ++ +L + ++KG +D ++L
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE--- 388
++ C + +D A+ +E DV TY+VLL L + GR EA ++ + E
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGK 696
Query: 389 ------LKVVSSS----------------------------SFVIVVSRLCHLKELRKAM 414
+ SS S+ + LC +L++A
Sbjct: 697 LYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAK 756
Query: 415 KNHDEMLKMGHKPDEATYKQVISGFM 440
DEM++ G D +TY ++ G +
Sbjct: 757 AVLDEMMQKGMSVDNSTYITLMEGLI 782
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 166/389 (42%), Gaps = 14/389 (3%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + L MM G P V N L+DA + + A L MVR G+ + FT
Sbjct: 398 EGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFT 457
Query: 85 WSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ + LC+ ++E LL + + V Y V+ Y K+ A +EM
Sbjct: 458 LNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMI 517
Query: 140 NGRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
R LTP STY++++ G K TE D++ LM E L+P + + +I
Sbjct: 518 K-RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM-EMGLVPDD--TTYNIIIHAYCKE 573
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G A + + + TC ++ L GR+++A++++ E+G V Y
Sbjct: 574 GDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ LCK++ + D+ RG P + +++ G+ E +++L + +
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRM 376
G L F S+ + + K + IE + + D +Y+ + L G++
Sbjct: 694 SGKLYGRFFYPSI-KSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQL 752
Query: 377 EEAVRIFDYMKELKV-VSSSSFVIVVSRL 404
+EA + D M + + V +S+++ ++ L
Sbjct: 753 KEAKAVLDEMMQKGMSVDNSTYITLMEGL 781
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 197/437 (45%), Gaps = 9/437 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S +++ Y +G+ D LE++R+M +YGF P+V CNA+L ++ + E
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYS 123
M++ + P+ T++++ +LC G FE L+ SG + V YN V+ +Y
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
KKG F AA + L+ M + + TY+ ++ R + ++ M ++ + P
Sbjct: 280 KKGRFKAAIELLDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I S+ GK A + + T ++ EG KEA++++
Sbjct: 339 VTY--NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+++ +G+T + Y ++ LCK + + G + G + + + C
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G E LL+ + G+ D S+L+ +C + A + +I ++ S + Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 364 DVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ + G ++EA+RI++ M E +F ++V+ LC ++ +A + M
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 423 MGHKPDEATYKQVISGF 439
G P+ ++ +I+G+
Sbjct: 577 DGILPNTVSFDCLINGY 593
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 161/411 (39%), Gaps = 75/411 (18%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL-------- 102
N LL A+ + + A L+G MV+ + P+ +T++ + LCR GK + +
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716
Query: 103 ----------------GLLDSGIYSSVMY-----------------NLVIDFYSKKGDFG 129
G+ +G + + +Y N +ID YS+ G
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-------- 181
D L EM N +N P +TY+ +L G + + S + ++ +LP
Sbjct: 777 KTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 182 -----------------KHFLSGN--------DYVIQKLSDMGKTYAAEMIFKRACDEKI 216
K F+ + +I K G+ A + K I
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L DTC M+ L++ R +E+ + H +S++GI+ Y +N LC+ +
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ +++ P + S V + GK E LL +L L+ ++LM C
Sbjct: 956 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 1015
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
N + +A+ L + + LD+ +Y+VL+ GL G M A +++ MK
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1066
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 183/430 (42%), Gaps = 12/430 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ +S++G + ++ M +G P NAL+D + + A ++ M G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
++P++ ++ ++ LC++ +F++ G +G+ + Y +ID K G A
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
LNEM + + P TYS++++G + + + + IV + L P + +I
Sbjct: 464 VLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST--LI 520
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
MG A I++ E T ++ +L K G+V EA + ++ GI
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N + + + ++ + G+ P + C G +E E+
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ +D+ ++L+ C + + KA++L ++ + D TY L+ GL +
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 373 DGRMEEAVRIFDYMKELK---VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G+ A+ +F E + + + + V + + + + ++M +GH PD
Sbjct: 701 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 430 ATYKQVISGF 439
T +I G+
Sbjct: 760 VTTNAMIDGY 769
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 174/434 (40%), Gaps = 24/434 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++++ G + E R M G +P + + L++ E
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVID 120
A ++ M + G P FT+ + + LC+ G L S +VMYN ++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV------GLM 174
K G+ A EM R++ P TY+S++ G R KT ++ G +
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQ-RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKE 233
+ K++ F+ G Q + A + F+ D D T M+ S+
Sbjct: 721 LPNKVMYTCFVDGMFKAGQ--------WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G++++ + + + + Y ++ K L R ++ G +P +
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
V C + ++L A + +G+ +D + + L+ C+N +I+ A L +
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
L SLD T D ++ L ++ R +E+ + M + + S ++ +++ LC + +++
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 413 AMKNHDEMLKMGHK 426
A +EM+ HK
Sbjct: 953 AFVVKEEMI--AHK 964
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 200/487 (41%), Gaps = 63/487 (12%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNE 62
S +G D S +++ + G F E+ R+ RV G P + L+ R
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-GLSPNGIIYSTLIYNCCRMGC 528
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNL 117
++ A +Y AM+ +G + + FT++++ LC++GK E + + GI ++V ++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 118 VIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDG---------ARRYEKT--- 164
+I+ Y G+ AF +EM G + P F TY S+L G A ++ K+
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHH--PTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 165 --EVSDRIV---------------------GLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
D ++ G MV++ +LP + + +I L GKT
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS--LISGLCRKGKT 704
Query: 202 YAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A + K A L + C + + K G+ K I + G T A
Sbjct: 705 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE---LLSAVL 317
++ + + E+ LL ++ + P L+ + G K K+V L +++
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGP---NLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRM 376
G+L D C SL+ C + ++ + + +K +G +D T+++L+ +G +
Sbjct: 822 LNGILPDKLTCHSLVLGICESNMLEIGLKI-LKAFICRGVEVDRYTFNMLISKCCANGEI 880
Query: 377 EEAVRIFDYMKELKVV----SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
A + M L + + + V V++R +E R + EM K G P+ Y
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH---EMSKQGISPESRKY 937
Query: 433 KQVISGF 439
+I+G
Sbjct: 938 IGLINGL 944
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 193/430 (44%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++++C+ + L V M G+ P + ++LL+ I A L M
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G PN T++ + L K + L+D + V Y +V++ K+GD
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF+ LN+M G+ L PG Y++I+DG +Y+ + + + M K + P +
Sbjct: 854 AFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS-- 910
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + + KI T ++ A KEG++ EA ++Y + +R
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + +V + P + + + C + +E
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E+ + +GL+ ++ + L++ D A + ++ ++ TY+ LLDGL
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G++E+A+ +F+Y++ K+ + ++ I++ +C ++ + G KPD
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150
Query: 430 ATYKQVISGF 439
Y +ISGF
Sbjct: 1151 VAYNTMISGF 1160
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 185/433 (42%), Gaps = 17/433 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H + + + M V G+ P N L+ L+ N+ A L M
Sbjct: 767 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSKK 125
V G P+ T+ +V LC+ G ++ LL+ G+ ++YN +ID K
Sbjct: 827 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV---LIYNTIIDGLCKY 883
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A + EM + + P TYSS++ Y + + R++ M+E+K+ P F
Sbjct: 884 KHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 942
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I GK AE ++ I+ T ++ R+ EA Q++
Sbjct: 943 FS--ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 1000
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + Y + CK + EE + R++ +RG + + + + G
Sbjct: 1001 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 1060
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+E+ ++ G+ + ++L++ C N +++KA+ + +++ K + TY++
Sbjct: 1061 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 1120
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+++G+ K G++E+ +F + LK V ++ ++S C +A EM +
Sbjct: 1121 MIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 424 GHKPDEATYKQVI 436
G P+ Y +I
Sbjct: 1180 GTLPNSGCYNTLI 1192
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 148/327 (45%), Gaps = 8/327 (2%)
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI---YSS--VMYN 116
++ LA + G M++ G P++ T + CR + + L+D + Y V YN
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 297
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID K AFD E+ + + P TY+++++G + + R++ M++
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
KK+ P ++ GK A+ +F+ I+ T ++ L R+
Sbjct: 357 KKITPNVITYS--ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA Q++ L+ +G Y +N CK + E+ L R++ +RG + + +
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G + +E S + G+ D + + L+ C N +++KA+ + ++K +
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIF 383
LD+ TY ++ G+ K G++EEA +F
Sbjct: 535 DLDIVTYTTVIRGMCKTGKVEEAWSLF 561
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 171/401 (42%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + N+ + L M G+ N +T+S++ CR + + L +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 105 LDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + N+V ++ Y A +++M P T+++++ G
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQPNTVTFNTLIHGLF 811
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ K + ++ MV K P G V+ L G T A + + K+E
Sbjct: 812 LHNKASEAMALIDRMVAKGCQPDLVTYG--VVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 869
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L K + +A+ ++ + +GI Y + ++ LC + + LL
Sbjct: 870 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D++ER P S + + +GK E E+L ++ + + SSL+ +C +
Sbjct: 930 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 989
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D+A + + DV TY+ L+ G K R+EE + +F M + +V ++ ++
Sbjct: 990 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 1049
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I++ L + A + EM+ G P+ TY ++ G
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 166/385 (43%), Gaps = 19/385 (4%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVID 120
A L+G MV+ P+ +S + + + KF+VV+ L + GI ++ Y+++I+
Sbjct: 679 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ ++ A L +M P T SS+L+G ++ + +V M
Sbjct: 739 CFCRRSQLPLALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 797
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I L K A + R + + T G ++ L K G A
Sbjct: 798 PNTVTF--NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + + + + Y ++ LCK ++ L +++ +G P + S ++
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+W + LLS ++++ + D F S+L++ + ++ +A L+ ++ K +
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR------LCHLKELRKAM 414
TY L++G R++EA ++F++M VS F VV+ C K + + M
Sbjct: 976 VTYSSLINGFCMHDRLDEAKQMFEFM-----VSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ EM + G + TY +I G
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGL 1055
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ + RV +A+ + + E G Y A ++ LCK + + +++
Sbjct: 260 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 319
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G P + + V C +W + LLS ++ K + + S+L++ + N ++
Sbjct: 320 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 379
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+A L ++ ++ D+ TY L++GL R++EA ++FD M ++ S+ +
Sbjct: 380 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 439
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C K + MK EM + G + TY +I GF
Sbjct: 440 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 478
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/501 (18%), Positives = 197/501 (39%), Gaps = 92/501 (18%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + + M G+ P + A NA++D+L + + A + + R G+ PN T++ +
Sbjct: 276 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 335
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC S ++ LL I + N++ +D + K G A + EM ++
Sbjct: 336 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSI 394
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--------------------------- 177
P TYSS+++G +++ + ++++ LMV K
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454
Query: 178 --KLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
+ + + L N + +IQ G A+ F + I T +L L
Sbjct: 455 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 514
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
G +++A+ I+ + +R + + Y + +CK + EE L + +G P +
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 574
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGL------------------------------ 321
+ ++ C KG EVE L + + +GL
Sbjct: 575 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 634
Query: 322 ---------------LLDSFCCSSLMEYY-------CSNRQIDKAIALHIKIEKLKGSLD 359
LL +F + +Y S ++D A+AL ++ K +
Sbjct: 635 LLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS 694
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
+ + LL + K + + + + + M+ L + + ++ I+++ C +L A+
Sbjct: 695 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 754
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M+K+G++P+ T +++G+
Sbjct: 755 KMMKLGYEPNIVTLSSLLNGY 775
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 176/472 (37%), Gaps = 73/472 (15%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E + M +G P + N LL L E+ A ++ M + + + T++ V + +
Sbjct: 489 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 548
Query: 93 CRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNE---MCNG 141
C++GK E L S G+ V Y ++ KG + A + ++ + M N
Sbjct: 549 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 608
Query: 142 RNLTPGFSTYSSILDGAR---RYEKTEVSDRIVGLMVEKKLLPKHF-----------LSG 187
L+ G T S+ L Y + + D G+ + L + F LS
Sbjct: 609 CTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSR 668
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
N KL D + EM+ R IE +L A++K + I + +
Sbjct: 669 NGLSELKLDDAVALFG-EMVKSRPFPSIIEFSK-----LLSAIAKMNKFDVVISLGEQMQ 722
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
GI Y +N C+ Q +L +++ GY P + LS + C +
Sbjct: 723 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 782
Query: 308 EVEELLSAVLDKG-------------------------LLLDSF----CCSSLMEY---- 334
E L+ + G L+D C L+ Y
Sbjct: 783 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 842
Query: 335 --YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----E 388
C D A L K+E+ K V Y+ ++DGL K M++A+ +F M+
Sbjct: 843 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 902
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
VV+ SS ++S LC+ A + +M++ PD T+ +I F+
Sbjct: 903 PNVVTYSS---LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 951
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 256 SDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+D Y F +N C Q +L +++ GY P + + V C + + + L
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ +++ G D +++++ C ++++ A +IE+ +V TY L++GL
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
R +A R+ M + K+ + ++ ++ ++ +A + +EM++M PD T
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400
Query: 432 YKQVISGF 439
Y +I+G
Sbjct: 401 YSSLINGL 408
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L +L G D SL+ +C ++ A++L K+ ++ D+ Y+ ++D L
Sbjct: 245 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 304
Query: 372 KDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K R+ +A FD+ KE++ + ++ +V+ LC+ A + +M+K P
Sbjct: 305 KTKRVNDA---FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361
Query: 428 DEATYKQVISGFM 440
+ TY ++ F+
Sbjct: 362 NVITYSALLDAFV 374
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 193/476 (40%), Gaps = 91/476 (19%)
Query: 15 LSLVLDCYS-------HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
L+L CY+ G VY+ M +G VP V + ++D L + I A
Sbjct: 87 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 146
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFY 122
++ +M G++PN+ +S + LC++ K + L +L ++ YN++ID
Sbjct: 147 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGL 206
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K GD AA +EM P TY+ ++ G + T+ +
Sbjct: 207 CKSGDVEAARAFFDEMLEA-GCKPDVYTYNILISGFCKAGNTDAAS-------------- 251
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
H L+ + D+ TY A ++ L+K +++EA+ +
Sbjct: 252 HSLAQETTINGCTIDI-HTYTA---------------------IVDWLAKNKKIEEAVAL 289
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
I+ G T + Y A +N LCK + EE LLR +V+ G P + + + G
Sbjct: 290 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID---G 346
Query: 303 KGKWK---EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
GK K E +L + +GL LD+ C ++L+ +I +A +++ + D
Sbjct: 347 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYM--------------------------------- 386
V T ++DGL K GR+ AVRIF M
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466
Query: 387 ---KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K + ++ I++ LC ++ A DEML+ G KPD TY +ISGF
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 522
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 188/431 (43%), Gaps = 8/431 (1%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
LS ++D S G + +++ M G P +AL+ L + ++ A + M
Sbjct: 129 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 188
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSV-MYNLVIDFYSKKGDFG 129
+ +P+ T++++ LC+SG E +L++G V YN++I + K G+
Sbjct: 189 KAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 248
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AA L + T TY++I+D + +K E + ++ + P ++ +
Sbjct: 249 AASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT--IATYN 306
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ L MG+ A + ++ D T ++ L KE R EA +++ ++ R
Sbjct: 307 ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + Y A + L + + + + + + G +P + LS + G+
Sbjct: 367 GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 426
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ ++ +GL + S+L+ C R++D A+ + +++K + D TY++L+DG
Sbjct: 427 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 486
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K G +E A FD M E ++ I++S C A D+M +
Sbjct: 487 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSAN 546
Query: 429 EATYKQVISGF 439
TY +ISG
Sbjct: 547 VVTYGALISGL 557
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 159/397 (40%), Gaps = 40/397 (10%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE+ M+ P N L+D L + ++ A + M+ G P+ +T++++
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 91 ILCRSGKFEVVLGLL--DSGIYSSVM----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C++G + L ++ I + Y ++D+ +K A L E
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV-ALMEKITANGC 298
Query: 145 TPGFSTYSSILDG----ARRYEKTEVSDRIV----------------GLMVEK------K 178
TP +TY+++L+G R E ++ +IV GL EK K
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 358
Query: 179 LLPKHFLSG-------NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
L + L G +I++L GK A ++K T M+ LS
Sbjct: 359 LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 418
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K GR+ A++I+ + RG+ + Y A ++ LCK + + +L + + P +
Sbjct: 419 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + C G + +L+ G D + + L+ +C D A + +
Sbjct: 479 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ S +V TY L+ GL K ++ +A F +MKE
Sbjct: 539 SSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKE 575
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 145/327 (44%), Gaps = 5/327 (1%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN +++ K G A D L ++ + TP TY+S++DG + +++ + ++ M
Sbjct: 24 YNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 82
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ L +I++L GK A ++K T M+ LSK G
Sbjct: 83 ALRGLALDTVCY--TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 140
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ A++I+ + RG+ + Y A ++ LCK + + +L + + P + +
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C G + +L+ G D + + L+ +C D A + +
Sbjct: 201 VLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTI 260
Query: 355 KG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRK 412
G ++D+ TY ++D L K+ ++EEAV + + + + +++ +++ LC + L +
Sbjct: 261 NGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 320
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A+ +++ G PD TY +I G
Sbjct: 321 AIDLLRKIVDNGCTPDVVTYTSLIDGL 347
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+++EA+ + I+ G T + Y A +N LCK + EE LLR +V+ G P + +
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 295 RFVASQCGKGKWK---EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ G GK K E +L + +GL LD+ C ++L+ +I +A +++ +
Sbjct: 61 SLID---GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM------------------------- 386
DV T ++DGL K GR+ AVRIF M
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177
Query: 387 -----------KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
K + ++ +++ LC ++ A DEML+ G KPD TY +
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237
Query: 436 ISGF 439
ISGF
Sbjct: 238 ISGF 241
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 103/265 (38%), Gaps = 8/265 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + +++ R + G P V +L+D L ++ A L+ M G++ + +
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375
Query: 86 SLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + L ++GK V + G + V + +ID SK G GAA M
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM-E 434
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R L P YS+++ G + K + + ++ M + P + +I L G
Sbjct: 435 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY--NILIDGLCKSGD 492
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
AA F + + T ++ K G A ++ +S + Y A
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGA 552
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERG 285
++ LCK Q + + + ERG
Sbjct: 553 LISGLCKRRQLTKASLYFQHMKERG 577
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 200/445 (44%), Gaps = 18/445 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + +++++C+SH + + G+ P N LL L +++
Sbjct: 82 KGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKE 141
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--GIY----SSVMYNLVI 119
A + ++R ++ ++ + LC+SG+ L LL G+ +MY +I
Sbjct: 142 ALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAII 201
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D + K A+D +EM + + P T++S++ G + + VGL+ E L
Sbjct: 202 DSFCKDKLVIDAYDLYSEMI-VKKIYPNVVTFNSLIYGFCIVGQLK---EAVGLLNEMSL 257
Query: 180 LPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ ++ N Y L D G+ A + + +E T ++
Sbjct: 258 ---NNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V +A +++ IS RG+T Y +N LCK +E L +++ + P + S
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G+ +V +L+ + ++G + +SL+ C N Q+DKAIAL K++
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
D++TY L+DGL K+GR+++A RI+ D + + ++ + ++++ LC +A+
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+M G PD TY+ +IS
Sbjct: 495 SLLSQMEDNGCMPDAVTYETLISAL 519
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 152/347 (43%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A++D+ + + A LY M+ + PN T++ + C G+ + +GL
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ ++V +N++ID K+G+ A L+ M + + P TY+S++DG
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK-QGVEPNVVTYTSLMDGYF 310
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + + + + + P + +I L A +FK + +
Sbjct: 311 LVKEVNKAKHVFNTISLRGVTPN--VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K GR+ + + I+ RG Y + +N LCK HQ ++ LL
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + G P + V C G+ K+ + + +L KG L+ + ++ C
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
D+A++L ++E D TY+ L+ LFK+ + +AV++ M
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 16/291 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS-------LVAQ 90
M + P V N L+D L ++ E++ A+ + M++ GV PN T++ LV +
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314
Query: 91 ILCRSGKFEVV-LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ F + L + ++S Y+++I+ K A EM + +N+TP
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHS---YSVMINGLCKNKMVDEAVKLFKEM-HLKNMTPNTV 370
Query: 150 TYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TYSS++DG + + ++V D I + + P + ++ N ++ L + A +
Sbjct: 371 TYSSLIDGLCKSGRISDVWDLIDE--INNRGQPANIITYNS-LLNGLCKNHQVDKAIALL 427
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ DE I+ T ++ L K GR+K+A +IY + +G + Y +N LCKE
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+E LL + + G +P A+ +++ K + +LL ++ +
Sbjct: 488 GFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 175/421 (41%), Gaps = 49/421 (11%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + + M + G P + N L++ ++ A + +++ G P+ T +
Sbjct: 69 FKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNT 128
Query: 88 VAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + LC +GK + L D I V Y +I+ K G+ AA L ++
Sbjct: 129 LLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLL 188
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P Y++I+D + D++V D Y
Sbjct: 189 LVRPDVIMYTAIIDSFCK-------DKLV------------------------IDAYDLY 217
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+ EMI K+ + T ++ G++KEA+ + + +S + + +
Sbjct: 218 S-EMIVKKIYPNVV-----TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILI 271
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCKE + ++ +L ++++G P + + + + + + + + + +G+
Sbjct: 272 DGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVT 331
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ S ++ C N+ +D+A+ L ++ + + TY L+DGL K GR+ + +
Sbjct: 332 PNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISD---V 388
Query: 383 FDYMKELKVVSSSSFVI----VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+D + E+ + +I +++ LC ++ KA+ +M G +PD +TY ++ G
Sbjct: 389 WDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDG 448
Query: 439 F 439
Sbjct: 449 L 449
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 122/276 (44%), Gaps = 8/276 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D +G V +M G P V +L+D + E+ A ++ +
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI 325
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVIDFYSKKGDF 128
GV+PN ++S++ LC++ + + L L + ++V Y+ +ID K G
Sbjct: 326 SLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRI 385
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+D ++E+ N R TY+S+L+G + + + + ++ M ++ + P +S
Sbjct: 386 SDVWDLIDEI-NNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPD--MSTY 442
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L G+ A+ I++ + L M+ L KEG EA+ + + +
Sbjct: 443 TTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMED 502
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
G Y ++ L K ++ + LLR+++ R
Sbjct: 503 NGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 98/252 (38%), Gaps = 39/252 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L +L K K AI + +GI + +N Q ++ +++ G
Sbjct: 59 ILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLG 118
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P + ++ + C GK KE V+ K LD +L+ C + + A+
Sbjct: 119 YQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAAL 178
Query: 346 ALHIKIEK-LKGSLDVATYDVLLDGLFKD------------------------------- 373
L KIE L DV Y ++D KD
Sbjct: 179 QLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYG 238
Query: 374 ----GRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+++EAV + + M L V+ + +F I++ LC E++KA M+K G +P
Sbjct: 239 FCIVGQLKEAVGLLNEM-SLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEP 297
Query: 428 DEATYKQVISGF 439
+ TY ++ G+
Sbjct: 298 NVVTYTSLMDGY 309
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 196/478 (41%), Gaps = 54/478 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + G P V LL L ++ + A L+ M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
PN T++ + LCR G+ + LLD G+ + + Y ++D KKGD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+D + + + + M EK + P F +
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ AE + + + KI T ++ A KEG+ EA ++Y +
Sbjct: 296 --MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+++ + + + +G P + + + CG + +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 309 VEELLSAVLDKGLLLDS-----------------------------------FCCSSLME 333
ELL + + GL+ D+ C +L++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYDVLLDGLFKDGRMEEAVRI 382
C N ++ A+ + ++K K LD V TY++L+ GL +G+ EA +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M +V + ++ ++ LC L +A + D M P+ T+ +I+G+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 205/468 (43%), Gaps = 77/468 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D KG + L + R M V +P V +A++D+L + A L+ M
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 77 GVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ P+ FT++ + C SG++ +++ +L+ I V+ YN +I+ + K+G F A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ +EM R + P TYSS++DG + + + ++ + LM K P + ++ N +
Sbjct: 345 EELYDEMLP-RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLI 402
Query: 192 ---------------IQKLSDMG-----KTYAA-------------------EMIFKRAC 212
+ ++++ G TY EMI C
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + TC +L L G++K+A++++ ++ + + +D D N
Sbjct: 463 PDIV-----TCDTLLDGLCDNGKLKDALEMFKVMQK---SKKDLDASHPFN--------- 505
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
G P + ++ +GK+ E EEL + +G++ D+ SS++
Sbjct: 506 ------------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C ++D+A + + S +V T+ L++G K GR+++ + +F M +V
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +++ ++ + + A+ EM+ G PD T + +++G
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 18/358 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G F + E+Y M G +P ++++D +QN + A ++ M G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
SPN T++ + C + + + + LL ++G+ + + YN +I + GD AA
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLSG--- 187
D L EM + L P T ++LDG K + + + +M + K L H +G
Sbjct: 451 DLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 188 ----NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + GK AE +++ I T M+ L K+ R+ EA Q++
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + + +N CK + ++ L ++ RG + A+ +
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G ++ ++ G+ D+ +++ S ++ +A+A+ +EKL+ S+D++
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM---LEKLQMSMDLS 684
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/456 (19%), Positives = 200/456 (43%), Gaps = 36/456 (7%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
+SCE ++L L + KGL D ++++ M +P+V L+ + R
Sbjct: 37 ESCEA-GFGGESLKLQSGFHEIKGL-EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSS 112
L LY M R + + ++++++ + C K L D +++
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCN------GRNLTPGFSTYSSILDGARRYEKTEV 166
+++ L ++ DR++E N P T++++++G R +
Sbjct: 155 LLHGLCVE------------DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--G 224
+ ++ M+E L P G ++ + G T +A + ++ +E + +
Sbjct: 203 AVALLDRMMEDGLQPTQITYGT--IVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVVIYS 259
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ +L K+GR +A ++ + E+GI Y + + C + + LL++++ER
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
P + + + + +GK+ E EEL +L +G++ ++ SS+++ +C ++D A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSR 403
+ + S ++ T++ L+DG R+++ + + M E +V+ ++++ ++
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +L A+ EM+ G PD T ++ G
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K ++ A+ + I++ G+ + ++ LC E + E L + E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +G+ E LL +++ GL ++++ C A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L K+E++ + +V Y ++D L KDGR +A +F M+E + ++ ++
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C A + EML+ PD TY +I+ F+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 191/430 (44%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++++C+ + L V M G+ P + ++LL+ I A L M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G PN T++ + L K + L+D + V Y +V++ K+GD
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF LN+M G+ L PG Y++I+DG + + + + + M K + P +
Sbjct: 240 AFILLNKMEQGK-LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSS-- 296
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + + KI T ++ A KEG++ EA ++Y + +R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + +V + P + S + C + E
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGM 416
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ ++ ++L++ D A + ++ ++ TY+ LLDGL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G++E+A+ +F+Y++ K+ + ++ I++ +C ++ + G KPD
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 430 ATYKQVISGF 439
Y +ISGF
Sbjct: 537 VAYNTMISGF 546
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 186/440 (42%), Gaps = 17/440 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + LS +L+ Y H + + + M V G+ P N L+ L+ N+ A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL--------GLLDSGIYSSVMYNLV 118
L MV G P+ T+ +V LC+ G ++ G L+ G+ ++Y +
Sbjct: 206 VALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGV---LIYTTI 262
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID K A + EM + + P TYSS++ Y + + R++ M+E+K
Sbjct: 263 IDGLCKNKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P F +I GK AE ++ I+ T ++ R+ E
Sbjct: 322 INPDVFTFSA--LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A Q++ + + Y + CK + +E L R++ +RG + + + +
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G +E+ ++ G+ + ++L++ C N +++KA+ + +++ K
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKN 416
+ TY+++++G+ K G++E+ +F + LK V ++ ++S C +A
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 417 HDEMLKMGHKPDEATYKQVI 436
EM + G P+ Y +I
Sbjct: 559 FKEMKEDGTLPNSGCYNTLI 578
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 170/401 (42%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + N+ + L M G+ N +T+S++ CR + + L +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 105 LDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + N+V ++ Y A +++M P T+++++ G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV-TGYQPNTVTFNTLIHGLF 197
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ K + ++ MV K P G V+ L G T A ++ + K+E
Sbjct: 198 LHNKASEAVALIDRMVAKGCQPDLVTYG--VVVNGLCKRGDTDLAFILLNKMEQGKLEPG 255
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L K + +A+ ++ + +GI Y + ++ LC + + LL
Sbjct: 256 VLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D++ER P S + + +GK E E+L ++ + + SSL+ +C +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D+A + + DV +Y L+ G K R++E + +F M + +V ++ ++
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ L + A + EM+ G P+ TY ++ G
Sbjct: 436 TLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 171/392 (43%), Gaps = 21/392 (5%)
Query: 61 NEIRL--ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSV 113
+E++L A L+G MV+ P+ +S + + + KF+VV+ L + G+ ++
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHY 117
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+++I+ + ++ A L +M P T SS+L+G ++ + +V
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M P + +I L K A + R + + T G ++ L K
Sbjct: 177 MFVTGYQPNTVTF--NTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G A + + + + + Y ++ LCK ++ L +++ +G P +
Sbjct: 235 GDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S ++ C G+W + LLS ++++ + D F S+L++ + ++ +A L+ ++ K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR------LCHL 407
+ TY L++G R++EA ++F++M VS F VVS C
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM-----VSKHCFPDVVSYSTLIKGFCKA 409
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K + + M+ EM + G + TY +I G
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ +N C + E L+ + GY P + + + K E L+ ++ K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK 215
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G D ++ C D A L K+E+ K V Y ++DGL K+ M++A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275
Query: 380 VRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ +F M+ VV+ SS ++S LC+ A + +M++ PD T+ +
Sbjct: 276 LNLFKEMETKGIRPNVVTYSS---LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 436 ISGFM 440
I F+
Sbjct: 333 IDAFV 337
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 181/414 (43%), Gaps = 44/414 (10%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ ++ M++ G P + CN +++ + R ++ ASC G M++ G P+ T++ +
Sbjct: 102 ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHG 161
Query: 92 LCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + E L L D + + V Y +I K A + N+M + + P
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN-GIRP 220
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+S++ G L ++G+ A
Sbjct: 221 NVVTYNSLVSG-------------------------------------LCEIGRWSDAAW 243
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + I+ T ++ A K G++ EA ++Y ++ + + Y A +N LC
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ +E + + GY P + + + C + ++ ++ + KGL+ ++
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L++ YC + D A + ++ + D+ TY+VLLDGL +G +E+A+ IF YM
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423
Query: 387 KELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ ++ ++ I++ +C + ++ A + G KP+ TY +ISGF
Sbjct: 424 RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 477
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 8/268 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + D + R M G P V AL+DA + +I A LY M++ V P+ FT+
Sbjct: 236 GRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTY 295
Query: 86 SLVAQILCRSGKFE---VVLGLLDSGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC G+ + + L++S Y + V Y +I + K EM +
Sbjct: 296 TALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM-S 354
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ L TY+ ++ G + +V+ + M ++ P + + ++ L G
Sbjct: 355 QKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD--IRTYNVLLDGLCYNGY 412
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A MIFK ++++ T +++ + K G+V++A ++ + +G+ Y
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIP 288
++ C+ E L + + E G++P
Sbjct: 473 MISGFCRRGFIHEADALFKKMKEDGFLP 500
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 135/348 (38%), Gaps = 41/348 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +L + H D L ++ + GF P V L+ L + + A ++ M
Sbjct: 154 TFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
+G+ PN T++ + LC G++ ++ ++ GI +V+ + +ID + K G
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKI 273
Query: 129 GAA----------------------------FDRLNE------MCNGRNLTPGFSTYSSI 154
A + RL+E + P TY+++
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ G + ++ E +I M +K L+ +IQ +G+ A+ +F +
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITY--TVLIQGYCLVGRPDVAQEVFNQMGSR 391
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T +L L G V++A+ I+ + +R + + Y + +CK + E+
Sbjct: 392 RAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDA 451
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L + +G P + + ++ C +G E + L + + G L
Sbjct: 452 FDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
Q E L +V +P ++ +R ++ ++ V L + G+ + C+
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+M C + Q +A K+ KL D+ T+ LL G R+E+A+ +FD + +
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++ ++ LC + L A++ ++M G +P+ TY ++SG
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
D+ ++V+ K + + V L + G P + + C + L +
Sbjct: 84 DFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKM 143
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ G D +SL+ +C +I+ A+AL +I + +V TY L+ L K+ +
Sbjct: 144 MKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHL 203
Query: 377 EEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
AV IF+ M + VV+ +S +VS LC + A +M+K G +P+ T+
Sbjct: 204 NHAVEIFNQMGDNGIRPNVVTYNS---LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 433 KQVISGFM 440
+I F+
Sbjct: 261 TALIDAFV 268
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 201/472 (42%), Gaps = 44/472 (9%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S +++ Y +G+ D LE++R+M +YGF P+V CNA+L ++ + E
Sbjct: 120 NSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWS 179
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYS 123
M++ + P+ T++++ +LC G F+ L+ SG + V YN V+ +Y
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
KKG F AA + L+ M N + + TY+ ++ R ++ ++ M ++ + P
Sbjct: 240 KKGRFKAAIELLDHM-NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ ++ S+ GK A + + T ++ EG KEA++++
Sbjct: 299 VTY--NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 244 HLISER-----------------------------------GITVRDSDYYAFVNVLCKE 268
H++ + G+ V Y ++ LCK
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+E +L ++ + G P + S + C G+ K +E++ + GL +
Sbjct: 417 GFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIY 476
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
S+L+ C + + I ++ + + D T++VL+ L K G++ EA M
Sbjct: 477 STLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ SF +++ E KA DEM K+GH P TY ++ G
Sbjct: 537 DGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 165/421 (39%), Gaps = 78/421 (18%)
Query: 44 VPA---VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
VPA CN L+ A+ + + A L+G MV+ + P+ FT++ + LCR GK +
Sbjct: 607 VPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVI 666
Query: 101 VL------------------------GLLDSGIYSSVMY-----------------NLVI 119
+ G+ +G + + Y N +I
Sbjct: 667 AILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMI 726
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D YS+ G D L EM N +N P +TY+ +L G + + S + M+ +
Sbjct: 727 DGYSRMGKIEKTHDLLFEMGN-QNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785
Query: 180 LP-------------------------KHFLSGN--------DYVIQKLSDMGKTYAAEM 206
LP K F+ + +I K G+ A
Sbjct: 786 LPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFD 845
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ I L +TC ++ L++ R +E+ + H +S++GI+ Y +N LC
Sbjct: 846 MVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC 905
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ + + +++ P + S V + GK E LL ++L L+
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIA 965
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++LM +C N + +A+ L + + LD+ +Y+VL+ GL G M A +F+ M
Sbjct: 966 SFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025
Query: 387 K 387
K
Sbjct: 1026 K 1026
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 177/430 (41%), Gaps = 12/430 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ +S++G + ++ M +G P NAL+D + + A ++ M G
Sbjct: 304 LLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKG 363
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
+ + ++ ++ LC++ +F++ G +G+ + Y +ID K G A
Sbjct: 364 LIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
LNEM + + P TYS++++G R + + + IV + L P + +I
Sbjct: 424 VMLNEM-SKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST--LI 480
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
MG I++ E T ++ +L K G+V EA + ++ GI
Sbjct: 481 YNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N + + + ++ + G+ P + C G E+
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ + +D+ C++L+ C + +DKA++L ++ + D TY L+ GL +
Sbjct: 601 LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660
Query: 373 DGRMEEAVRIFDYMKELK---VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G+ A+ +F E + V + + V + + + +M K+G D
Sbjct: 661 KGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDV 719
Query: 430 ATYKQVISGF 439
T +I G+
Sbjct: 720 VTTNAMIDGY 729
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 177/435 (40%), Gaps = 26/435 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++++ G + E R M G +P + + L++ E
Sbjct: 502 EGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLK 561
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVID 120
A ++ M + G P FT+ + + LC+ G L S +VM N +I
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLIT 621
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV------GLM 174
K G+ A EM R++ P TY+S++ G R KT ++ G +
Sbjct: 622 AMCKSGNLDKAVSLFGEMVQ-RSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNL 680
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSK 232
V K++ F+ G + G+ + A F++ D K+ L D T M+ S+
Sbjct: 681 VPNKVMYTCFVDG-------MFKAGQ-WKAGFYFRQQMD-KLGLTRDVVTTNAMIDGYSR 731
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G++++ + + + + Y ++ K L R ++ G +P +
Sbjct: 732 MGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ C + ++L A + +G+ +D + L+ C+N +I+ A + +
Sbjct: 792 CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
L SLD T D ++ L ++ R +E+ + M + + S ++ +++ LC + +++
Sbjct: 852 SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911
Query: 412 KAMKNHDEMLKMGHK 426
A +EM+ HK
Sbjct: 912 TAFVVKEEMI--AHK 924
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 154/378 (40%), Gaps = 49/378 (12%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYS 123
+Y AM+ +G +P+ FT++++ LC++GK E + + GI ++V ++ +I+ Y
Sbjct: 495 IYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYG 554
Query: 124 KKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
G+ AF +EM G + P F TY S+L G
Sbjct: 555 SSGEGLKAFSVFDEMTKVGHH--PTFFTYGSLLKG------------------------- 587
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
L G AAE K + + C ++ A+ K G + +A+ +
Sbjct: 588 ------------LCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSL 635
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG-YIPCAMELSRFVASQC 301
+ + +R I Y + ++ LC++ + ++ RG +P + + FV
Sbjct: 636 FGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMF 695
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+WK + GL D +++++ Y +I+K L ++ ++
Sbjct: 696 KAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLT 755
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDE 419
TY++LL G K + + ++ M ++ + + I++ +C L +K
Sbjct: 756 TYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG-ICESNMLEIGLKILKA 814
Query: 420 MLKMGHKPDEATYKQVIS 437
+ G + D T+ +IS
Sbjct: 815 FICRGVEVDRHTFNMLIS 832
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/318 (18%), Positives = 121/318 (38%), Gaps = 42/318 (13%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P ++ N LL ++ + + LY +M+ G+ P+K T + +C S E+ L +
Sbjct: 752 PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKI 811
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCN-----------------GR 142
L + I V +N++I G+ AFD +N M + R
Sbjct: 812 LKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNR 871
Query: 143 N-----------------LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
N ++P Y +L+G R + + + M+ K+ P +
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNV- 930
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+++ L+ GK A ++ + K+ + ++ K G V EA+++ +
Sbjct: 931 -AESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVV 989
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG- 304
+S G+ + Y + LC + L ++ G++ V +G
Sbjct: 990 MSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGT 1049
Query: 305 KWKEVEELLSAVLDKGLL 322
++ + +L +L +G +
Sbjct: 1050 EFSGTDIILKDLLARGFI 1067
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 218/514 (42%), Gaps = 83/514 (16%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYR 59
+I +CE ALS V+ Y+ GL + LE+Y ++ V+ VP V ACN+LL+ L
Sbjct: 127 LIPTCE-------ALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVH 179
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVM 114
++ +A +Y MV + +T +V + LC+ GK E L++ + + V
Sbjct: 180 HGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVF 239
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI---- 170
YN +ID Y K GD A E+ + P TY ++++ + K E D++
Sbjct: 240 YNTLIDGYCKNGDIERANLLFKEL-KVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEM 298
Query: 171 ------VGLMVEKKLLPKHFLSG-----------------------NDYVIQKLSDMGKT 201
V L + ++ F G + +I GK
Sbjct: 299 KERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKV 358
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
AE + + A + + ++ A SK G A ++ +SERG T+ Y A
Sbjct: 359 REAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
V+ L + + + ++ERG +P A + ++ C KG++ ++LL +LD+ +
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNV 478
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIAL-HIKIEK------------LKG------------ 356
D+F ++L++ + + +D+A L + IE+ +KG
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL 538
Query: 357 ----------SLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLC 405
S D TY ++DG K + A+R+F M K+ + +F +++ C
Sbjct: 539 CFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L +A K +EM G +P+ TY +I F
Sbjct: 599 RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYF 632
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/450 (17%), Positives = 193/450 (42%), Gaps = 42/450 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G ++ + R M G P ++ N L++ + ++R A L +R G
Sbjct: 313 IIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG 372
Query: 78 VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG------IYSSVMYNLVIDFYSKKGD 127
+ PNKF+++ + ++G++ E+++ + + G Y ++++ LV+ G+
Sbjct: 373 LFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVV-----AGE 427
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A ++M R + P + Y+ ++ G + + + +++ M+++ + P F+
Sbjct: 428 VDVALTVRDKMME-RGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFV-- 484
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
N ++ G A+ +F+ + I+ C M+K K G + +A+ + +
Sbjct: 485 NATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMF 544
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD---VVERGYIPCAMELSRFVASQCGKG 304
V D + + ++ + ++ G LR ++++ P + + + C G
Sbjct: 545 N---GVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNG 601
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
E++ + G + + L+ Y+C ++ KA ++ K + AT++
Sbjct: 602 DLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFN 661
Query: 365 VLLDGLFKDG-----------RMEEAVRIFDYM----KELKVVSSSSFVIVVSRLCHLKE 409
L++GL + + + F M + ++ + +S ++ LC K
Sbjct: 662 YLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLC---LCQHKM 718
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A++ HD+M+ G PD ++ ++ G
Sbjct: 719 VKPALQLHDKMMSKGFPPDPVSFIALLHGL 748
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 136/355 (38%), Gaps = 36/355 (10%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L V M G +P + N L+ L ++ A L M+ V+P+ F + +
Sbjct: 431 ALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVD 490
Query: 91 ILCRSGKFEVVLGL----LDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
R G + L ++ GI +SV+ N +I Y K G A M NG + +
Sbjct: 491 GFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVH-S 549
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--HFLSGNDYVIQKLSDMGKTYA 203
P TYS+I+DG + + R+ GLM++K P F S +I G
Sbjct: 550 PDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTS----LINGFCRNGDLNR 605
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
AE +F+ E T ++ KEG++ +A + + D+ + VN
Sbjct: 606 AEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVN 665
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
L + G+ ++S+ + E ++ G
Sbjct: 666 GLTNNN------GIA------------------ISSKRSNSQPNLTLEFFGMMISDGWDW 701
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+S++ C ++ + A+ LH K+ D ++ LL GL +GR+++
Sbjct: 702 RIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD 756
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 198/419 (47%), Gaps = 12/419 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G E ++ YG +V++CN L+ L + EI +Y M+R + P ++++V
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171
Query: 91 ILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDR---LNEMCNGR 142
LC+ GK +++ + G+ ++V+ YN +ID Y K G G + L EM
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM-RAD 230
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P T++ ++DG + + + ++ M + + P + ++ N +I L + GK
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP-NVVTYNS-LINGLCNNGKVN 288
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + + ++ T +L K VK+A +++ + ++GIT + Y +
Sbjct: 289 EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILI 348
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ CK+ E+ L R ++ +G P + +A C KG + L+S + K L
Sbjct: 349 DAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLK 408
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D + L++ C+ ++ KA+ L ++ + TY+ ++DG K+G + A+ +
Sbjct: 409 ADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNL 468
Query: 383 FDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
M+++ ++ + +++ +++ C +L A +EML+ G P+ TY+ V M
Sbjct: 469 RSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMM 527
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 8/302 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + ++V+ M G P V N+L++ L ++ A+ L M
Sbjct: 238 TFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDF 128
V + PN T + + C++ + L D GI +V YN++ID Y K +
Sbjct: 298 VNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF L + G+ + P STY+ ++ G R E + +V M K L K L
Sbjct: 358 EDAF-ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHL--KADLITY 414
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L + G+ A + C + ++ T M+ KEG ++ A+ + + +
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G + Y + CK+ + E+ GLL +++E+G IP M KG +
Sbjct: 475 VGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534
Query: 309 VE 310
+E
Sbjct: 535 IE 536
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 195/454 (42%), Gaps = 55/454 (12%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE + M P V N L+D L + ++ AS + MV GV+P+ T++ +
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304
Query: 91 ILCRSGKFEVVLGLL---------------------------------------DSGIYS 111
LC++GKFE LL SG
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364
Query: 112 SVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
V+ Y+++ D K+G AF+ + EM +G+ TP TY++++DG + KTE + +
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEM-SGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCM 226
+ +V +P + ++ L G+ A E + KR C + T +
Sbjct: 424 LESLVSSGFVPD--VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI----TYTAL 477
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
++ L + GRV EA I+ + + T Y + VN CK + +E ++ + Y
Sbjct: 478 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY 537
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
I L + C +G+ E+ + + +G + + + +M+ C + ++D+A
Sbjct: 538 IDVYNAL---MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
+ DV +Y++++DGLFK + +EA ++ D M + + + ++ ++++ C
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A+ M+K G PD TY +ISG
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 171/414 (41%), Gaps = 37/414 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GFVP V + L D L ++ I A L M G +PN T++ + LC++ K E
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL+S + S V Y +++D K+G A + M R TP TY+++++
Sbjct: 421 YELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALME 479
Query: 157 GARRYEKTEVSDRIVGLMVEK----------KLLPKHFLSGNDYVIQKLSD--MGKTYAA 204
G R + + + I MV K L+ + S QK+ D G Y
Sbjct: 480 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI- 538
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
D ++ KEGR+ E ++ ++ RG Y ++
Sbjct: 539 ----------------DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 582
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + +E L + G +P + + + K KE ++L ++ G+ D
Sbjct: 583 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++LM +C + D A+ + + K D TY+ L+ GL + R+ +A +
Sbjct: 643 AVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 702
Query: 385 YMKELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M V S +++ ++ RLC L++A+ D M G + + TY I
Sbjct: 703 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 188/444 (42%), Gaps = 55/444 (12%)
Query: 39 RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS--- 95
+V GF P VS L A + ++ A ++ R+ SP+ ++ + CR
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIF----RNIPSPDAIAYNAIIHGHCRKNDC 242
Query: 96 -GKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
G E + + + + V YN++ID K A + L+EM + R +TP T++S
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD-RGVTPDTVTFNS 301
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSGNDYVIQKLSDMGKTYAAEMIF 208
I+DG + K E + ++ +M E+ P +SG Q+ D K E +
Sbjct: 302 IMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG--LCKQQNVDRAKDLVDEFVS 359
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ + T + L K GR+ EA ++ +S +G T Y ++ LCK
Sbjct: 360 SGFVPDVV-----TYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ E+ LL +V G++P + + V C +G+ + +++ +L +G
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474
Query: 329 SSLMEYYCSNRQIDKAIALHIK--------------------------------IEKLKG 356
++LME C ++D+A + + ++ ++G
Sbjct: 475 TALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG 534
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMK 415
+ + Y+ L+DG K+GR++E +F+ M V + ++ IV+ LC ++ +A
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+ M G PD +Y +I G
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGL 618
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 175/408 (42%), Gaps = 21/408 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF + N L L ++ M+ G +P+ +T+ LV + LC+ + +
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 102 LGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL-TPGFSTYSSIL 155
+LD G V +Y ++ + K G A + RN+ +P Y++I+
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF------RNIPSPDAIAYNAII 233
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G R + + + M E+K+ P F + +I L KT A + D
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTY--NILIDGLCKASKTDKASEMLHEMVDRG 291
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T ++ L K G+ + A + +++ER Y ++ LCK+ +
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L+ + V G++P + S C +G+ E EL+ + KG + ++L++
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411
Query: 336 CSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
C + +KA L +E L S DV TY +++DGL K+GR+++A+++ + M K
Sbjct: 412 CKASKTEKAYEL---LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 468
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ ++ LC + +A EM+ D Y +++G+
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 516
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 192/464 (41%), Gaps = 46/464 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G L++ M G P+V AL++ L R + A ++ MV
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-------GIYSSVM-------------- 114
+ + + + C+S + + ++D +Y+++M
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 559
Query: 115 ----------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
YN+V+D K G AF L M + P +Y+ I+DG
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAGCVPDVVSYNIIIDGL 618
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ K + + +++ M++ + P + ++ + + A I K ++
Sbjct: 619 FKASKPKEARQVLDQMIQAGIPPDAVTY--NTLMAQFCKEERFDDAVGILKNMIKAGVDP 676
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVNVLCKEHQPEEVCGL 277
+ T ++ LS+ R+ +A ++ H + G V + Y ++ LCKE ++ L
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 736
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ + G + + F+ C +G+ E LLS + L D ++++ C
Sbjct: 737 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS---EMDTLRDEVSYTTVIIGLCK 793
Query: 338 NRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
Q+D+A L ++ +KG + T+++L+D K R++EA+ + M + S
Sbjct: 794 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVI 853
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +V++ LC L ++ KA + DEM G +Y +I G
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 897
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 191/410 (46%), Gaps = 34/410 (8%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P + NAL+D ++ + ++ M G PN T+++V LC+ GK +
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 104 LLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L+S + V YN++ID K A L++M + P TY++++
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLM--- 650
Query: 159 RRYEKTEVSDRIVGL---MVEKKLLPKH-----FLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++ K E D VG+ M++ + P + +SG + + + +G Y E++ +
Sbjct: 651 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG----LSQTNRLGDAY--ELMHEM 704
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + T ++ L KEG +K+A+ + ++ G+ Y F++ LCKE +
Sbjct: 705 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 764
Query: 271 PEEVCGLLRDVV----ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E LL ++ E Y + L + A Q + K E+++ KGL + S
Sbjct: 765 LDEASSLLSEMDTLRDEVSYTTVIIGLCK--AEQLDRAS-KLAREMVAV---KGLCITSH 818
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L++ + +++D+A+ L + + S V TY++++ L K ++++A +FD M
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+V+SS S+ +++ LC ++A++ +EM + D+ ++ V
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 164/396 (41%), Gaps = 60/396 (15%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+C G ++V+D G + M G VP V + N ++D L++ ++
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 624
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLV 118
+ A + M++ G+ P+ T++ + C+ +F+ +G+L + I + +V YN +
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I S+ G A++ ++EM + +TY++I+D
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIID---------------------- 722
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+L G A ++ +E T + L KEGR+ E
Sbjct: 723 ---------------RLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE 767
Query: 239 AIQIYHLISERGITVRDSDYYAFVNV-LCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRF 296
A L+SE T+RD Y V + LCK Q + L R++V +G + +
Sbjct: 768 A---SSLLSEMD-TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLL 823
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY------YCSNRQIDKAIALHIK 350
+ + K K ++E L+ + GL++ C S++ Y C ++DKA L +
Sbjct: 824 IDA---FTKTKRLDEALTLL---GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 877
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +Y VL+ GL GR +EA+++ + M
Sbjct: 878 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+Q+L D A + F A D + T C L+ L + G ++ + + G
Sbjct: 99 VLQRLKD---PQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAG 155
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y+ + LC+ +Q ++ +L RG+ P + + C G+ K+
Sbjct: 156 YAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL 215
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E+ + D+ ++++ +C D A+ ++ + K + DV TY++L+DGL
Sbjct: 216 EIFRNIPSP----DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGL 271
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K + ++A + M + V + +F ++ LC + +A M + +P
Sbjct: 272 CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSC 331
Query: 430 ATYKQVISGF 439
TY +ISG
Sbjct: 332 CTYNTLISGL 341
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 181/395 (45%), Gaps = 13/395 (3%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG 108
++D L + N + A+ + M + G PN++T++++ C+ K LL +SG
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 109 IYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEV 166
+ +V+ Y+ VI + ++ A+ +M NG P TY+++L G R +
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG--CMPNLVTYNTLLSGLCRNGLMDE 130
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ ++ M E+ L P F D ++ L GK A +F+ + +
Sbjct: 131 AYELLDEMRERGLQPDKF--SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ L K GR+ EA +++ + E + A ++ LCK + +E +L + +R
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + S + C G+ ++ +E+ ++ +G+ + +SL+ +C +D A+
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRL 404
L ++ D+ TY+ L+DGL K GR EA R+F MK K + ++ ++
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA-KFCNPDVITYSCLIGGF 367
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L+ + A D+MLK PD T+ ++ G+
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 15/416 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+++R M G +P + N LL L R + A L M G+ P+KF++ + L
Sbjct: 98 KLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 157
Query: 93 CRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNL 144
C++GK ++ L + + V Y+ +I K G A F+++ E +
Sbjct: 158 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRE----NSC 213
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+++++DG + ++ + + +++ M ++ P + +I L G+ A
Sbjct: 214 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS--LIDGLCKTGQVRDA 271
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ +FKR IE T ++ V A+ + ++ G Y ++
Sbjct: 272 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 331
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + E L D+ + P + S + C + L +L + +L D
Sbjct: 332 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 391
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S+L+E YC+ +D A L ++ S DV TY L+DG K GRM EA R+
Sbjct: 392 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 451
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + + ++ ++ C + A K +EM+ G +P+ TY+ +I GF
Sbjct: 452 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 194/436 (44%), Gaps = 19/436 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A S ++ G + +++ MR P V AL+D L + + ++ A + M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
+PN T+S + LC++G+ EV ++ GI +V+ YN +I +
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---- 184
+A + EM P TY++++DG + + ++R+ G M K P
Sbjct: 304 DSALLLMEEM-TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
L G ++++ DM +T +M+ + + + T +++ G V +A ++
Sbjct: 363 LIGGFCKLERI-DMARTLFDDMLKQAVLPDVV-----TFSTLVEGYCNAGLVDDAERLLE 416
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + Y + V+ CK + E +L+ + +RG P + + + + C G
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATY 363
K +LL ++ G+ + SL+ +C +++A + ++E+ + D+ Y
Sbjct: 477 KPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAY 536
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEM-L 421
V++DGL + GRM A+ + + +K+ +V ++ LC KEL KAM+ +EM L
Sbjct: 537 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 596
Query: 422 KMGHKPDEATYKQVIS 437
+P+ Y+ VI
Sbjct: 597 SRKSRPNAEAYEAVIQ 612
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
+V T+ +++DGL K R+ EA F MK+ V + ++ ++++ C + ++ +A
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM + G P+ TY VI GF
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGF 87
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 199/440 (45%), Gaps = 28/440 (6%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D S+AL+L G ++ ++ M G P V N L++ L + + A+
Sbjct: 190 DRISEALALF-------GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 242
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYS 123
L MV G+ + T+ + +C+ G + L LL ++ I V +Y+ +ID
Sbjct: 243 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K G A +EM + + P TY+ ++DG + + + R++ M+E+++ P
Sbjct: 303 KDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD- 360
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE--LQDDTC--GCMLKALSKEGRVKEA 239
L+ N + + + GK + AE + CDE + + DT M+ K R +A
Sbjct: 361 VLTFNALISASVKE-GKLFEAE----KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 415
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ L++ + + ++V C+ + +E LLR++ RG + + +
Sbjct: 416 KHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 471
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C ++L ++ G+ D+ C+ L+ +C N ++++A+ L I+ K LD
Sbjct: 472 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 531
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
Y++++ G+ K +++EA +F + V ++ +++S C + A
Sbjct: 532 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 591
Query: 419 EMLKMGHKPDEATYKQVISG 438
+M GH+PD +TY +I G
Sbjct: 592 KMKDNGHEPDNSTYNTLIRG 611
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 184/422 (43%), Gaps = 30/422 (7%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M+R F AV CN ++ R N +A LY M + N ++++++ + C
Sbjct: 97 MVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCH 155
Query: 97 KFEVVLGLL----------DSGIYSSVMYNLVID--------FYSKKGDFGAAFDRLNEM 138
K L D ++++++ L ++ + + G+ FD++ E+
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEI 215
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
LTP T++++++G + + +V MV K L G ++ + M
Sbjct: 216 ----GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT--IVNGMCKM 269
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G T +A + + + I+ ++ L K+G +A ++ + E+GI Y
Sbjct: 270 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 329
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ C + + LLRD++ER P + + +++ +GK E E+L +L
Sbjct: 330 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 389
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+ + D+ +S++ +C + + D A + L S DV T++ ++D + R++E
Sbjct: 390 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDE 445
Query: 379 AVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+++ + + V +++++ ++ C + L A EM+ G PD T ++
Sbjct: 446 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 505
Query: 438 GF 439
GF
Sbjct: 506 GF 507
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 150/369 (40%), Gaps = 36/369 (9%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +A++D L + A L+ M+ G++PN FT++ + C G++ L
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L I + +N +I K+G A +EM + R + P TY+S++ G
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH-RCIFPDTVTYNSMIYGFC 407
Query: 160 RYEKTEVSDRIVGLMVEKKL-------------------------LPKHFLSGN----DY 190
++ + + + + LM + + + L N +
Sbjct: 408 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I ++ AA+ +F+ + TC +L + +++EA++++ +I
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I + Y ++ +CK + +E L + G P + ++ CGK +
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + D G D+ ++L+ +IDK+I L ++ S D T ++ D L
Sbjct: 588 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-L 646
Query: 371 FKDGRMEEA 379
DGR++++
Sbjct: 647 ITDGRLDKS 655
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 173/361 (47%), Gaps = 16/361 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P+V N LL+ ++ + + M ++ V N T++++ + RS K E
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277
Query: 102 LGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L D GI V +Y +I++ K G+ AF +EM R L P TY ++++
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE-RRLVPNAYTYGALIN 336
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRAC 212
GA + + + ++ +V M K + N + L D G A +
Sbjct: 337 GACKAGEMKAAEMMVNDMQSKGV------DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQ 390
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ E+ TC + + R +EA ++ + ERG+ + +++ CKE
Sbjct: 391 QKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFA 450
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L + + ++G P + + F+ C KGK +E +L++ + ++GL+ D++ +SL+
Sbjct: 451 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ ++ +D+A+ L ++ +L + +V TY V++ GL KDGR +EA +++D M + +V
Sbjct: 511 DGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 570
Query: 393 S 393
Sbjct: 571 P 571
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++D Y KG+ + L + +M+ GF CN + R N
Sbjct: 357 KGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 416
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L M GV+PN ++S++ I C+ F L S V YN I+
Sbjct: 417 AKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIE 476
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y KKG A+ +NEM R L P TY+S++DG R DR + L E +
Sbjct: 477 RYCKKGKMEEAYKLINEM-QERGLMPDTYTYTSLIDGERASGNV---DRALELFNE---M 529
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P+ L+ N V+ T ++ LSK+GR EA
Sbjct: 530 PQLGLNRN--VV-----------------------------TYTVIISGLSKDGRADEAF 558
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++Y +++ GI D Y + + L H+ + L +VV+R
Sbjct: 559 KLYDEMNKEGIVPDDGIYSSLIASL---HKVGPLVSGLENVVDR 599
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F A + E+ + +C L AL + G ++ ++ + + GI +R + A V+ LC
Sbjct: 140 VFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC 199
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K+ + L+ ++V +G+ P + + + V E+LS + + +
Sbjct: 200 KKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 259
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L+E+Y + +I++A L ++ K DV Y +++ K G M+ A +FD M
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E ++V ++ ++ +++ C E++ A ++M G + + ++ G+
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 306 WKEVEELLSAV---LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
W VE ++S++ ++ +++ FC L Y NR D ++ + K +D +
Sbjct: 97 WSNVERIVSSIGGEFNEPSIVEKFC-DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERS 155
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
L L + G ME V M + + + S+ VV LC E+ +A DE++
Sbjct: 156 CFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELV 215
Query: 422 KMGHKPDEATYKQVISGFM 440
G KP TY +++G++
Sbjct: 216 CKGFKPSVITYNTLLNGYI 234
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK---- 97
G P NAL+D RQ +I A + MV G+ N W+ + +C++GK
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 98 FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E++ +++ G+ S Y+L+I+ + + + AF+ L+EM R L P TYS I++
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM-KKRKLAPTVLTYSVIIN 424
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R + ++ I+ MV L P N V L
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKP------NAVVYTTL--------------------- 457
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ A +KEGRV+E+ I + E+GI Y + + CK + EE
Sbjct: 458 ----------MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +++ER P A F+ G+ + + + +L G+L + ++L+E +C
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+ +A ++ I + DV TY VL+ GL ++G+M EA IF ++E ++ ++
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++S C + KA + +EM G PD TY +I G
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 671
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 194/437 (44%), Gaps = 10/437 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + S SL+++ + E+ M+ P V + +++ L R ++
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVID 120
+ + MV +G+ PN ++ + + G+ E ++ + + GI V YN +I
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K A L EM R L P TY + +DG + + E++DR M+ +L
Sbjct: 495 GFCKAKRMEEARTYLMEMLE-RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 553
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSKEGRVKEA 239
P + +I+ G A +F+ ++ LQD T ++ LS+ G++ EA
Sbjct: 554 PN--VGIYTALIEGHCKEGNVTEAFSVFRFILSRRV-LQDVQTYSVLIHGLSRNGKMHEA 610
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I+ + E+G+ Y + ++ CK+ ++ LL ++ +G P + + +
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 670
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ + + L + +GL + +++++ YC ++ A L ++ D
Sbjct: 671 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
Y+V+L+ K+ + E+A+ +F M E S+ SF ++ C +L++A +E
Sbjct: 731 AFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEE 790
Query: 420 MLKMGHKPDEATYKQVI 436
M++ P+ TY +I
Sbjct: 791 MIEKQFIPNHVTYTSLI 807
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 192/430 (44%), Gaps = 10/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ ++ +G + + MR G +P V N+L+ + + A M+
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
+ PN T+ ++G+ E+ +L G+ +V +Y +I+ + K+G+
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF + + R L TYS ++ G R K + I + EK LLP F +
Sbjct: 575 AFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTY--NS 631
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I G A + + C + I T ++ L K G ++ A ++ I RG
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T Y A V+ CK P LL +++ RG P A + + C + K+++
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 751
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L +L+KG + ++L+E YC + ++ +A L ++ + + + TY L+D
Sbjct: 752 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHN 810
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G M EA R++ M+E V+ ++ ++ ++ ++ + + +EM+ G +PD+
Sbjct: 811 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870
Query: 430 ATYKQVISGF 439
TY +I +
Sbjct: 871 MTYYVMIDAY 880
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 158/393 (40%), Gaps = 52/393 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ S G + ++ ++ G +P N+L+ +Q + AS L M
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGA 130
G++P+ T++++ LC++G+ E L D G+ + V Y ++D Y K + A
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 714
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF L EM R + P Y+ IL+ + EK E + + M+E
Sbjct: 715 AFQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-------------- 759
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
K +A+ + F +++ K G+++EA + + E+
Sbjct: 760 ---------KGFASTVSFN---------------TLIEGYCKSGKLQEANHLLEEMIEKQ 795
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y + ++ CK E L ++ ER +P A + + G EV
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 855
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-------SLDVATY 363
L ++ KG+ D +++ YC + +A L +I +KG L + T
Sbjct: 856 ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI-LVKGMPMKSGFRLGLPTC 914
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
V+ G G M+EA + M + VS+++
Sbjct: 915 SVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 947
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 173/361 (47%), Gaps = 16/361 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P+V N LL+ ++ + + M ++ V N T++++ + RS K E
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281
Query: 102 LGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L D GI V +Y +I++ K G+ AF +EM R L P TY ++++
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE-RRLVPNAYTYGALIN 340
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRAC 212
GA + + + ++ +V M K + N + L D G A +
Sbjct: 341 GACKAGEMKAAEMMVNDMQSKGV------DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQ 394
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ E+ TC + + R +EA ++ + ERG+ + +++ CKE
Sbjct: 395 QKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFA 454
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L + + ++G P + + F+ C KGK +E +L++ + ++GL+ D++ +SL+
Sbjct: 455 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 514
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ ++ +D+A+ L ++ +L + +V TY V++ GL KDGR +EA +++D M + +V
Sbjct: 515 DGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 574
Query: 393 S 393
Sbjct: 575 P 575
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++D Y KG+ + L + +M+ GF CN + R N
Sbjct: 361 KGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 420
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L M GV+PN ++S++ I C+ F L S V YN I+
Sbjct: 421 AKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIE 480
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y KKG A+ +NEM R L P TY+S++DG R DR + L E +
Sbjct: 481 RYCKKGKMEEAYKLINEM-QERGLMPDTYTYTSLIDGERASGNV---DRALELFNE---M 533
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P+ L+ N V+ T ++ LSK+GR EA
Sbjct: 534 PQLGLNRN--VV-----------------------------TYTVIISGLSKDGRADEAF 562
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++Y +++ GI D Y + + L H+ + L +VV+R
Sbjct: 563 KLYDEMNKEGIVPDDGIYSSLIASL---HKVGPLVSGLENVVDR 603
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F A + E+ + +C L AL + G ++ ++ + + GI +R + A V+ LC
Sbjct: 144 VFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC 203
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K+ + L+ ++V +G+ P + + + V E+LS + + +
Sbjct: 204 KKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 263
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L+E+Y + +I++A L ++ K DV Y +++ K G M+ A +FD M
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E ++V ++ ++ +++ C E++ A ++M G + + ++ G+
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 306 WKEVEELLSAV---LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
W VE ++S++ ++ +++ FC L Y NR D ++ + K +D +
Sbjct: 101 WSNVERIVSSIGGEFNEPSIVEKFC-DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERS 159
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
L L + G ME V M + + + S+ VV LC E+ +A DE++
Sbjct: 160 CFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELV 219
Query: 422 KMGHKPDEATYKQVISGFM 440
G KP TY +++G++
Sbjct: 220 CKGFKPSVITYNTLLNGYI 238
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 194/434 (44%), Gaps = 11/434 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS++++C+SH V + G P + L++ L + + A L+ M
Sbjct: 135 TLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
V G P+ +T++ + LC+ G+ GLL ++G +V+ Y+ +ID + K
Sbjct: 195 VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRV 254
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D + M + ++P TY+S++ G + + + + ++ M ++P +
Sbjct: 255 NEALDIFSYM-KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD--IVTF 311
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ + GK A+ + K + +E T ++ S V EA +++ +
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT 371
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK + +E L +++ +G P + + + C G +E
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + G L + F S L++ +C KA L ++ ++ Y++L+D
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491
Query: 369 GLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+ K G + +A ++F ++K L+ ++ + +++ LC L +A++ M + G
Sbjct: 492 AMCKSGNLRDARKLFSELFVKGLQ-PNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 550
Query: 427 PDEATYKQVISGFM 440
PDE +Y +I GF+
Sbjct: 551 PDEISYNVIIRGFL 564
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 8/279 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D +G + V + M G P V ++L+ ++E+ A L+ AM
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
+ G P+ F+++++ C+ + + L + I+ ++V YN +I + G
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + M NL P TYS +LDG + + R+ M P L
Sbjct: 430 REARNLFKNMHTNGNL-PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN--LVMY 486
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I + G A +F + ++ ++ L KEG + EA++ + + E
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
G + Y + L+ ++ ++G+I
Sbjct: 547 DGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 179/374 (47%), Gaps = 10/374 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGD 127
MVR GV+PN +T++++ + LC G+ E +G++ ++V YN ++ + + G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A ++ M N P T++S+++G + + E + ++ MV + L P +
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD--VVS 118
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ +G + + +F + T ++ A K G +++A+ + +
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
ERG+ + + + A ++ CK+ ++ + ++ + G P + + + C G+
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVL 366
EL+ + K + D S+++ YC +D A L+ K+ K KG L D TY L
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK-KGVLPDAITYSSL 297
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ GL ++ R+ +A +F+ M +L V ++ ++ C + KA+ HDEM++ G
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357
Query: 426 KPDEATYKQVISGF 439
PD TY +I+G
Sbjct: 358 LPDVVTYSVLINGL 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 184/441 (41%), Gaps = 35/441 (7%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKF 83
+G + + V MR G P N L+ A R E+ A + M +G PN
Sbjct: 23 RGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV 82
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + LC++G+ E + D + V YN ++ Y K G + +EM
Sbjct: 83 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD- 197
R L P T++S++ + E + +V M E+ L N+ L D
Sbjct: 143 TQ-RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL------RMNEVTFTALIDG 195
Query: 198 -MGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVR 254
K + + + K +Q ++ K GR+ A ++ + + +
Sbjct: 196 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 255
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y ++ CK + L + ++++G +P A+ S + C + + + EL
Sbjct: 256 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 315
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKD 373
+L G+ D F ++L++ +C ++KA++LH ++ + KG L DV TY VL++GL K
Sbjct: 316 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVLINGLSKS 374
Query: 374 GRMEEAVRIF-------------DYMKELKVVSSSSFVIVVSRL---CHLKELRKAMKNH 417
R +EA R+ Y + S + F VV+ L C +++A K +
Sbjct: 375 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 434
Query: 418 DEMLKMGHKPDEATYKQVISG 438
ML K D + Y +I G
Sbjct: 435 QSMLDRNWKLDGSVYSILIHG 455
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 173/394 (43%), Gaps = 23/394 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + +L Y G + L V+ M G VP V +L+ A + +
Sbjct: 110 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 169
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVID 120
A L M G+ N+ T++ + C+ G + L ++ GI SV+ YN +I+
Sbjct: 170 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 229
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G A + + EM + + P TYS+I+ G + + + ++ M++K +L
Sbjct: 230 GYCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 288
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I+ L + + A +F+ ++ + T ++ KEG V++A+
Sbjct: 289 PDAITYSS--LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-----------C 289
++ + +G+ Y +N L K + +E LL + +P C
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 406
Query: 290 A-MELSRFVA---SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ E VA C KG KE +++ ++LD+ LD S L+ +C + KA+
Sbjct: 407 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 466
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ H ++ + S + + L+ GLF++G + EA
Sbjct: 467 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 156/401 (38%), Gaps = 82/401 (20%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++D + KG D L MR G P+V NAL++ + + LA L M
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI------YSSVM--------- 114
V P+ T+S + C+ G F++ +L G+ YSS++
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307
Query: 115 ---------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
Y +ID + K+G+ A +EM + + P TYS
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSV 366
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + +T+ + R++ + + +P + Y A M+ C
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNI----------------KYDALML----CC 406
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
K E + + +LK +G +KEA ++Y + +R + S Y ++ C+ +
Sbjct: 407 SKAEFK--SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 464
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ ++ G+ P + V +G E + + +L CC
Sbjct: 465 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT--------CCP---- 512
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ + KA+ I + + +G++D A DVL G+ +DG
Sbjct: 513 --LADAEASKAL---IDLNRKEGNVD-ALIDVLC-GMARDG 546
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 189/422 (44%), Gaps = 11/422 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y GLF ++ +M G ALL L +R A ++ M DG +P+
Sbjct: 119 YCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPD 178
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+S++ LC +G+ + LL + + +YN +ID Y GD A D
Sbjct: 179 SHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFK 238
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
M + P TY+ ++ G + K E + + M+E L P + ++ + + S
Sbjct: 239 GM-QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP-NVVTYTTLIQGQCS 296
Query: 197 DMGKTYAAEMIFK-RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ +A ++ AC + + TC ++ AL K GR++EA Q + ++GI V
Sbjct: 297 EGHLEHAFRLLHSMEACG--LAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQ 354
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + ++ LCK + + L++ ++ G++P A S + C + K E LL+
Sbjct: 355 VIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLND 414
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+++ G+ ++ + L++ + + D + ++ DV TY V + +DGR
Sbjct: 415 MIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGR 474
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
ME+A + M + V + +++ ++ +L + +A + M+ G KP++ +Y
Sbjct: 475 MEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTV 534
Query: 435 VI 436
++
Sbjct: 535 LL 536
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/471 (17%), Positives = 175/471 (37%), Gaps = 85/471 (18%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y G +++++ M+ G +P V L+ + ++ A LY M+ G
Sbjct: 220 LIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAG 279
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
++PN T++ + Q C G E LL S E
Sbjct: 280 LAPNVVTYTTLIQGQCSEGHLEHAFRLLHS----------------------------ME 311
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
C L P T ++D ++ + E + + +G +V+K + + + +I L
Sbjct: 312 AC---GLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS--MIDALCK 366
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
GK A + ++ E ++ L +E ++ EAI + + + E G+
Sbjct: 367 SGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ ++ +E + + + + G P + + F+ S C G+ ++ E ++ ++
Sbjct: 427 FTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMI 486
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIA------------------------------- 346
D G+ + ++L++ Y + + +A +
Sbjct: 487 DHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYH 546
Query: 347 --------------------LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L ++ KL+ S YD + L K R+EEA M
Sbjct: 547 DLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGM 606
Query: 387 KELKVVSSSSFVIVVSRLCH-LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + S + C+ +K L++A++ D M+K + P +Y+ +I
Sbjct: 607 QSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFII 657
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 1/214 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ A G + A + + G+ Y +FV C+ C L + +RG
Sbjct: 80 LINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG 139
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ + CG G +E + + + G DS S ++ C + +A+
Sbjct: 140 CARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAV 199
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
AL +VA Y+ L+DG G +E A+ IF M+ + + ++ ++
Sbjct: 200 ALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGF 259
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
C ++ +AM + M++ G P+ TY +I G
Sbjct: 260 CKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQG 293
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 162/432 (37%), Gaps = 110/432 (25%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G F + + + GFVP ++L+D L R+N++ A L M+ G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Query: 78 VS-----------------------------------PNKFTWSLVAQILCRSGKFE--- 99
V P+ T+++ + C+ G+ E
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479
Query: 100 -VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+++ ++D G+ ++ YN +I Y+ G AF L M + P +Y+ +L
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID-NGCKPNDESYTVLL-- 536
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
GL+++K H L + + K+ DM + + +E I+
Sbjct: 537 --------------GLLLKKN--SYHDLVADSISLWKIVDMK-------VLEELLEEVIK 573
Query: 218 LQDDTCG----CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
LQ + C ++ LSK R++EA + +T + Y + + +E
Sbjct: 574 LQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKE 633
Query: 274 VCGLLRDVVERGYIPCAMELSRF-VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L +V+R Y+P +E RF + + C +G + + + +L K
Sbjct: 634 ALRFLDSMVKRNYLP-RLESYRFIICALCEEGSFHTAKSIFGDILSK------------- 679
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
EY NR D + +L+DGL + G + R+ +M+E
Sbjct: 680 EY---NR-------------------DEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCR 717
Query: 393 SSSSFVIVVSRL 404
S+ + SRL
Sbjct: 718 PGSA---IYSRL 726
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 5/215 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L AL++ G + + + + R + Y +N C L ++ G
Sbjct: 49 LLMALARHGMLSDMESLAARMPVRNLHT----YTTLINAYCHAGDLPAAKRHLSSLLRAG 104
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + FV C G + L + +G F ++L++ C + +A+
Sbjct: 105 LAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAM 164
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRL 404
A+ + + D Y +++ GL GR EAV + D M + V + + + ++
Sbjct: 165 AVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGY 224
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C +L A+ M G P+ TY Q+I GF
Sbjct: 225 CSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGF 259
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 191/413 (46%), Gaps = 10/413 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+Y M++ G P+V N+LL + AS L+ V GV+ N FT++++ L
Sbjct: 381 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWL 439
Query: 93 CRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ GK + LLD+ G+ +V+ YN +I + +KG+ A ++M R+L P
Sbjct: 440 CKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML-ARDLKPN 498
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++DG + +E + + M+ + P F + +I L +G+ A
Sbjct: 499 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF--NTIINGLCKVGQMSEARDK 556
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K +E T ++ KEG + A+ +Y + E G++ Y + +N CK
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
++ + ++ E+G S + C + + ++L +L+ GL +
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+S++ + ++ A+ + K+ + D+ TY L+DGL K+GR+ A ++ M
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V +F ++V+ LC+ +L A K +EM + P Y +I+G+
Sbjct: 737 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 789
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 190/445 (42%), Gaps = 36/445 (8%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ +L+ Y + ++ + M +P V N LL AL R+N I LY MV
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVV---------LGL-LDSGIYSSVMYNLVIDFYSK 124
G+ + FT ++ + + G+ E G+ LD+G YS ++I K
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYS-----IIIQAVCK 267
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
K + + L EM R P +T++S++ V+ G MVE L +
Sbjct: 268 KPNSNLGLELLEEM-KERGWVPSEATFTSVI----------VACVAQGNMVEALRLKEEM 316
Query: 185 LS-GNDYVIQKLSDMGKTYAAE-------MIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
++ G + + + K Y A+ +F + ++ + T +++ G +
Sbjct: 317 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNI 376
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
++A ++Y + GI + + + K EE L + V+ G + +
Sbjct: 377 EKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIM 435
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
++ C GK E LL ++++G++ + + ++ +C +D A ++ +
Sbjct: 436 MSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDL 495
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
+V TY +L+DG FK G E+A+ +FD M L + + +F +++ LC + ++ +A
Sbjct: 496 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARD 555
Query: 416 NHDEMLKMGHKPDEATYKQVISGFM 440
L+ G P TY ++ GF+
Sbjct: 556 KLKNFLEEGFIPSCMTYNSIVDGFI 580
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 39/329 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ M P V + L+D +++ + A L+ M+ ++P FT++ + LC
Sbjct: 486 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 545
Query: 94 RSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G+ + + L+ G S M YN ++D + K+G+ +A EMC ++P
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE-FGVSPNV 604
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKL----------------------------- 179
TY+S+++G + + +++ + M EK L
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 664
Query: 180 LPKHFLSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
L + LS N V I D+ AA + +K+ +++I T ++ L KEGR
Sbjct: 665 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 724
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ A +Y + +GI ++ VN LC + Q E +L ++ + P + +
Sbjct: 725 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 784
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+A +G KE L +LD+GL+ D
Sbjct: 785 LIAGYFREGNLKEAFTLHDEMLDRGLVPD 813
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 189/441 (42%), Gaps = 19/441 (4%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S++ S+++ C + +G ++ L + M G + +L+ Q + A L
Sbjct: 289 SEATFTSVIVACVA-QGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 347
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSK 124
+ + DG+ PNK T+S++ + C SG E L +GI SV N ++ Y K
Sbjct: 348 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407
Query: 125 KGDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ A +E C N+ TY+ ++ + K + + ++ MV + ++P
Sbjct: 408 APLWEEASKLFDEAVDCGVANIF----TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP- 462
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +S ND ++ G A +F ++ T ++ K+G ++A+ +
Sbjct: 463 NVVSYNDMILGHCRK-GNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 521
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + I D + +N LCK Q E L++ +E G+IP M + V
Sbjct: 522 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 581
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+G + + + G+ + +SL+ +C + +ID A+ ++ + LDV
Sbjct: 582 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 641
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRKAMKNHDE 419
Y L+DG K ME A +F + L+V S + ++ ++S L + A+ + +
Sbjct: 642 YSALIDGFCKRRDMESAQDLF--FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 699
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M+ D TY +I G +
Sbjct: 700 MINDRIPCDLGTYTTLIDGLL 720
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 198/447 (44%), Gaps = 46/447 (10%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M+ G S D +S V++ + +G Y M G +P V N+++ AL
Sbjct: 183 MMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALC 242
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM 114
+ + A + MV++GV P+ T++ + C SG+ + +G L G+ V+
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV 302
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+L++D+ K G A + M R L P +TY ++L G ++ L
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV + P H+ +F ++ A +K+
Sbjct: 362 MVRNGIHPDHY----------------------VFS---------------ILICAYAKQ 384
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V +A+ ++ + ++G+ Y A + +LCK + E+ +++ G P +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C KW+ EEL+ +LD+G+ L++ +S+++ +C ++ ++ L + +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
+ +V TY+ L++G G+M+EA+++ M + + ++ ++ +++ C + +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A+ EM G PD TY ++ G
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 159/374 (42%), Gaps = 10/374 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL++D G M+ +++ M G P ++ LL + + L MVR
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
+G+ P+ + +S++ + GK + V + G+ ++V Y VI K G
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGND 189
A +M + L+PG Y+S++ G K E ++ ++ M+++ + L F +
Sbjct: 425 AMLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS-- 481
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G+ +E +F+ ++ T ++ G++ EA+++ +
Sbjct: 482 -IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y +N CK + E+ L +++ G P + + + +
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+EL + + G ++ + ++ C N+ D A+ + + + L+ T+++++D
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 370 LFKDGRMEEAVRIF 383
L K GR +EA +F
Sbjct: 661 LLKVGRNDEAKDLF 674
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 136/311 (43%), Gaps = 37/311 (11%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C L GF+ +++ R + + + GL +K+ D V+++++++
Sbjct: 98 CRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS-----DAMDIVLRRMTEL 152
Query: 199 G---KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER---GIT 252
G ++ ++ K CDE R +EA+++ H++++ G
Sbjct: 153 GCIPNVFSYNILLKGLCDEN-------------------RSQEALELLHMMADDRGGGSP 193
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y +N KE ++ ++++RG +P + + +A+ C + E+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L+ ++ G++ D +S++ YCS+ Q +AI K+ DV TY +L+D L K
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 373 DGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+GR EA +IFD M + ++ + + + + L E+ + D M++ G PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL---DLMVRNGIHPD 370
Query: 429 EATYKQVISGF 439
+ +I +
Sbjct: 371 HYVFSILICAY 381
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 169/407 (41%), Gaps = 40/407 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+ +G + V+ MR G P A++ L + + A + M+
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+G+SP ++ + LC K+ E++L +LD GI +++ +N +ID + K+G
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG-- 187
+ ++L E+ + P TY+++++G K + + +++ MV L P
Sbjct: 494 ES-EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 188 -NDY------------------------------VIQKLSDMGKTYAAEMIFKRACDEKI 216
N Y ++Q L +T AA+ ++ R +
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+++ T +L L K +A+Q++ + + + + ++ L K + +E
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L G +P + G+G +E+++L ++ D G +DS + ++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A I++ SL+ +T + +D L G+ +E R
Sbjct: 733 QRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 147/393 (37%), Gaps = 77/393 (19%)
Query: 70 YGAMVRDG---VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
Y M R G V+P+ T+ ++ CR+G+ ++
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDL-------------------------- 105
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
GF+ +++ R + + + GL +K+
Sbjct: 106 --------------------GFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT-----SD 140
Query: 187 GNDYVIQKLSDMG---KTYAAEMIFKRACDEK-----IEL----QDDTCG---------- 224
D V+++++++G ++ ++ K CDE +EL DD G
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ KEG +A YH + +RGI Y + + LCK ++ +L +V+
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G +P M + + C G+ KE L + G+ D S LM+Y C N + +A
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
+ + K ++ TY LL G G + E + D M + F I++
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ +AM +M + G P+ TY VI
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 239 AIQIYHLISERG---ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ Y+ ++ G +T Y + C+ + + L +V+++G+ A+ +
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 296 FVASQCGKGKWKEVEEL-LSAVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKIEK 353
+ C + + ++ L + + G + + F + L++ C NR + LH+ +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 354 LKG--SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
G DV +Y +++G FK+G ++A + M + ++ ++ +++ LC + +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KAM+ + M+K G PD TY ++ G+
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK---- 97
G P NAL+D RQ +I A + MV G+ N W+ + +C++GK
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 374
Query: 98 FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E++ +++ G+ S Y+L+I+ + + + AF+ L+EM R L P TYS I++
Sbjct: 375 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM-KKRKLAPTVLTYSVIIN 433
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R + ++ I+ MV L P N V L
Sbjct: 434 GLCRCGNLQGTNAILREMVMNGLKP------NAVVYTTL--------------------- 466
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ A +KEGRV+E+ I + E+GI Y + + CK + EE
Sbjct: 467 ----------MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 516
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +++ER P A F+ G+ + + + +L G+L + ++L+E +C
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+ +A ++ I + DV TY VL+ GL ++G+M EA IF ++E ++ ++
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++S C + KA + +EM G PD TY +I G
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 680
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 194/437 (44%), Gaps = 10/437 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + S SL+++ + E+ M+ P V + +++ L R ++
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVID 120
+ + MV +G+ PN ++ + + G+ E ++ + + GI V YN +I
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K A L EM R L P TY + +DG + + E++DR M+ +L
Sbjct: 504 GFCKAKRMEEARTYLMEMLE-RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 562
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSKEGRVKEA 239
P + +I+ G A +F+ ++ LQD T ++ LS+ G++ EA
Sbjct: 563 PN--VGIYTALIEGHCKEGNVTEAFSVFRFILSRRV-LQDVQTYSVLIHGLSRNGKMHEA 619
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I+ + E+G+ Y + ++ CK+ ++ LL ++ +G P + + +
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ + + L + +GL + +++++ YC ++ A L ++ D
Sbjct: 680 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
Y+V+L+ K+ + E+A+ +F M E S+ SF ++ C +L++A +E
Sbjct: 740 AFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEE 799
Query: 420 MLKMGHKPDEATYKQVI 436
M++ P+ TY +I
Sbjct: 800 MIEKQFIPNHVTYTSLI 816
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 192/430 (44%), Gaps = 10/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ ++ +G + + MR G +P V N+L+ + + A M+
Sbjct: 464 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
+ PN T+ ++G+ E+ +L G+ +V +Y +I+ + K+G+
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF + + R L TYS ++ G R K + I + EK LLP F +
Sbjct: 584 AFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTY--NS 640
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I G A + + C + I T ++ L K G ++ A ++ I RG
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T Y A V+ CK P LL +++ RG P A + + C + K+++
Sbjct: 701 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 760
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L +L+KG + ++L+E YC + ++ +A L ++ + + + TY L+D
Sbjct: 761 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHN 819
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G M EA R++ M+E V+ ++ ++ ++ ++ + + +EM+ G +PD+
Sbjct: 820 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879
Query: 430 ATYKQVISGF 439
TY +I +
Sbjct: 880 MTYYVMIDAY 889
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 186/428 (43%), Gaps = 52/428 (12%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
+SC G S +++D Y G ++ + V+ + + F P++ +CN+LL L + N+
Sbjct: 137 RSCNG-SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNK 195
Query: 63 IRL-------------------------ASCLYG----------AMVRDGVSPNKFTWSL 87
+ L A C G M G SPN T+++
Sbjct: 196 VELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV 255
Query: 88 VAQILCRS----GKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ LCR+ E+ ++D G+ + Y+++I+ + + A L EM +
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID-V 314
Query: 143 NLTPGFSTYSSILDGARRYEKTE----VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
L P TY++++DG R E + D +V +E L+ + L + +
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL------LNGVCKA 368
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
GK A I + ++ +E T +++ + + A ++ + +R + Y
Sbjct: 369 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N LC+ + +LR++V G P A+ + + + +G+ +E +L + +
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+G+L D FC +SL+ +C +++++A +++ + + + TY +DG K G ME
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 379 AVRIFDYM 386
A R F+ M
Sbjct: 549 ADRYFNEM 556
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 169/388 (43%), Gaps = 13/388 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ S G + ++ ++ G +P N+L+ +Q + AS L M
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 663
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGA 130
G++P+ T++++ LC++G+ E L D G+ + V Y ++D Y K + A
Sbjct: 664 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 723
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF L EM R + P Y+ IL+ + EK E + L + +++L K F S +
Sbjct: 724 AFQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKA-----LDLFQEMLEKGFASTVSF 777
Query: 191 --VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I+ GK A + + +++ T ++ K G + EA +++ + E
Sbjct: 778 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 837
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
R + Y + ++ EV L ++V +G P M + + C +G E
Sbjct: 838 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L +L KG+ + +L++ C + + + L +I + L + T V+
Sbjct: 898 ACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIAR 957
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS 396
G G M+EA + M + VS+++
Sbjct: 958 GFQIAGNMDEAAEVLRSMVKFGWVSNTT 985
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 151/357 (42%), Gaps = 15/357 (4%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + G P + N L+D L + EI A L+ + G++PN T++ + C+S
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720
Query: 98 FEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST-- 150
LL+ + V +YN++++F K+ F A D EM L GF++
Sbjct: 721 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-----LEKGFASTV 775
Query: 151 -YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
++++++G + K + ++ ++ M+EK+ +P H + +I G A+ ++
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS--LIDHNCKAGMMGEAKRLWL 833
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + T +L G + E ++ + +GI YY ++ C+E
Sbjct: 834 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 893
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
E C L +++ +G + + C K ++ EV +LL+ + + G L CS
Sbjct: 894 NVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCS 953
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ + +D+A + + K + + L+DG E++ + M
Sbjct: 954 VIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 163/384 (42%), Gaps = 21/384 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +++ + +G + V+R + + V + L+ L R ++ A ++ +
Sbjct: 569 TALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE 628
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGA 130
G+ PN FT++ + C+ G + LL+ GI V YN++ID K G+
Sbjct: 629 KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER 688
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + +++ GR LTP TY++++DG + + + +++ M+ + + P F+
Sbjct: 689 AKNLFDDI-EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN--- 744
Query: 191 VIQKLSDMGKTYAAEMIFKRACD------EKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
VI E F++A D EK + +++ K G+++EA +
Sbjct: 745 VILNFC------CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLE 798
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ E+ Y + ++ CK E L ++ ER +P A + + G
Sbjct: 799 EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 858
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
EV L ++ KG+ D +++ YC + +A L +I + VA YD
Sbjct: 859 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYD 918
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKE 388
L+ L K E +++ + + E
Sbjct: 919 ALIQALCKKEEFFEVLKLLNEIGE 942
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 34/316 (10%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK---LLPKHF------LSGND 189
CNG +P + ++D R+ +G +VE L PK+F LS N
Sbjct: 139 CNG---SPNSVIFDMLMDSYRK----------MGFLVEAVNVFLGPKNFEFRPSLLSCNS 185
Query: 190 YVIQKLSDMGKTYAAEM---IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L D+ K E+ +F C K+ T M+ A K G VK+A ++ +
Sbjct: 186 L----LGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM 241
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
E+G + Y + LC+ +E L R +V++G +P + C + +
Sbjct: 242 GEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS 301
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYD 364
+E + +L ++D GL + ++L++ + RQ D A IK E + + ++ ++
Sbjct: 302 REAKLMLLEMIDVGLKPEPITYNALIDGFM--RQGDIEQAFRIKDEMVACGIEANLIIWN 359
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
LL+G+ K G+ME+A+ I M E V S ++ +++ C + + +A + DEM K
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419
Query: 424 GHKPDEATYKQVISGF 439
P TY +I+G
Sbjct: 420 KLAPTVLTYSVIINGL 435
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+L D + ++++ +C + A + +++ + S ++ TY+V++ GL + ++EA+
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + +V ++ I+++ C K R+A EM+ +G KP+ TY +I GF
Sbjct: 271 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 330
Query: 440 M 440
M
Sbjct: 331 M 331
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 183/421 (43%), Gaps = 19/421 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G+E++ + G P V N L+D+L + ++ A L+G M G PN T+S++
Sbjct: 100 GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGR- 142
LC+ G+ + L+ S + YN +D K+ A + + + +G
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219
Query: 143 NLTPGFSTYSSILDGARRYEKTEVS---DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
++P T+S+++DG + +T+ + D I G V + ++G L
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNG-------LCKAD 272
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A + + D+ + T ++ A K RV EA+++ H ++ RG T +
Sbjct: 273 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ ++ LCK + E + V R +P + + +A C G +++ L ++ K
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ D +L++ C Q++ A + + L +V TY+VL+ GL K GR+EE
Sbjct: 393 NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEP 452
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ M V S ++ +V LC A++ ++ G PD TY ++ G
Sbjct: 453 CEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDG 512
Query: 439 F 439
Sbjct: 513 L 513
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 159/396 (40%), Gaps = 69/396 (17%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+VP V NAL++ L + +++ A + +MV GV+P+ T+S++ C++ + +
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 102 LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
L LL G+ S R TP T++SI+DG +
Sbjct: 313 LELL-HGMAS------------------------------RGCTPNVVTFNSIIDGLCKS 341
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+++ + +I + + L+P + +I G A +F+ + ++
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTF--NILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L K G+V+ A I L+ G+ Y V+ LCK + EE C L ++
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V G +P +S SL+ C +
Sbjct: 460 VSSGCVP-----------------------------------ESMTYGSLVYALCRASRT 484
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIV 400
D A+ L K++ D TY++L+DGL+K G+ E+A+ + + M + S +F
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 544
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
L L M+ +L G PD T ++
Sbjct: 545 FGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 147/367 (40%), Gaps = 48/367 (13%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN+V+ + G+ A + + P TY++I++G + + + +
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF----KRACDEKIELQDDTCGCMLKAL 230
V++ P + + +I L G A + R C + T ++ L
Sbjct: 108 VKRGHHPD--VVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVV----TYSVLINGL 161
Query: 231 SKEGRVKEAIQIYHLISERGITVRDS--DYYAFVNVLCKEHQPEEVCGLLR--------- 279
K GR+ EA ++ ++ + V + Y +F++ LCK+ E C L+R
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221
Query: 280 --------------------------DVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
D++ GY+P + + V C K + ++
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+++DKG+ D S L++ +C ++D+A+ L + + +V T++ ++DGL K
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341
Query: 374 GRMEEAVRI-FDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
R EA +I + V +F I+++ C +A +EM+ +PD T+
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401
Query: 433 KQVISGF 439
+I G
Sbjct: 402 GALIDGL 408
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 32/177 (18%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F ++ M P V AL+D L + ++ A + M GV PN T+
Sbjct: 377 GNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 436
Query: 86 SLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNL--------VIDFYSKKGD 127
+++ LC+SG+ E L +S Y S++Y L + SK
Sbjct: 437 NVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKS 496
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
FG P TY+ ++DG + KTE + ++ MV K P F
Sbjct: 497 FG--------------WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 539
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 198/430 (46%), Gaps = 10/430 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRV-YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
L++ Y +DG+ V++MM +P V +ALL L + LA L+ MV
Sbjct: 161 LLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS 220
Query: 76 DGVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ P+ + ++ V + LC S E++ + +G + V YN++ID KK
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++ G++L P TY +++ G + ++ E+ ++ M+ + P +
Sbjct: 281 AVGIKKDLA-GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE--AAVSS 337
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ L GK A + KR D + ++ +L K + EA ++ + + G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ D Y +++ C+ + + L ++V+ G + + C G E
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++ +++K L +SLM YCS +I+KA+ L+ ++ + + T+ LL GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
F+ G + +AV++F+ M E V + ++ +++ C ++ KA + EM + G PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 430 ATYKQVISGF 439
+Y+ +I G
Sbjct: 578 YSYRPLIHGL 587
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 110/536 (20%), Positives = 218/536 (40%), Gaps = 114/536 (21%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A+S +++ +G + L + + + +G P + NAL+D+L + + A L+ M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI------YSS----------- 112
+ G+ PN T+S++ + CR GK + L L D+G+ Y+S
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 113 -------------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
V Y ++ Y KG A +EM G+ + P T+++
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM-TGKGIAPSIYTFTT 512
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------------LSGNDYVIQKLSDMG 199
+L G R + ++ M E + P +S ++++++ G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 200 ---KTYAAEMIFKRAC------DEKI----------ELQDDTCGCMLKALSKEGRVKEAI 240
TY+ + C + K+ EL + +L +EG+++EA+
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + +RG+ + Y ++ K + GLL+++ +RG P + + + ++
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 301 CGKGKWKEVEELLSAVLDKG---------LLLDSFCCSSLM---EYYCSNRQ-------- 340
G +KE + ++++G +++ C + + E CS Q
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 341 ----------------IDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIF 383
+ KA+ LH I LKG L + ATY++L+ G + GR+EEA +
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNAI--LKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M V ++ +++ LC +++KA++ + M + G +PD Y +I G
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 174/415 (41%), Gaps = 44/415 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F GLE+ M F P+ +A ++L++ L ++ +I A L +V GVSPN F ++
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 88 VAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ LC+ KF L D G+ + V Y+++ID + ++G A L EM +
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD-T 431
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
L Y+S+++G ++ ++ + M+ KKL P V+ S MG
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT--------VVTYTSLMG--- 480
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+G++ +A+++YH ++ +GI + +
Sbjct: 481 --------------------------GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ L + + L ++ E P + + + C +G + E L + +KG++
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D++ L+ C Q +A + K L+ Y LL G ++G++EEA+ +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 383 FDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M + V + + +++ K+ + EM G KPD+ Y +I
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 122/282 (43%), Gaps = 12/282 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----D 106
LL R+ ++ A + MV+ GV + + ++ + ++ GLL D
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 107 SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G+ V+Y +ID SK GDF AF + M N P TY+++++G +
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVN 734
Query: 166 VSDRIVGLMVEKKLLPKHFLSGN--DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
++ + M +P G D + + DM K A E+ A + + T
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK--AVEL--HNAILKGLLANTATY 790
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+++ ++GR++EA ++ + G++ Y +N LC+ + ++ L + E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+G P + + + C G+ + EL + +L +GL+ ++
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 191/413 (46%), Gaps = 10/413 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+Y M++ G P+V N+LL + AS L+ V GV+ N FT++++ L
Sbjct: 421 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWL 479
Query: 93 CRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ GK + LLD+ G+ +V+ YN +I + +KG+ A ++M R+L P
Sbjct: 480 CKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML-ARDLKPN 538
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++DG + +E + + M+ + P F + +I L +G+ A
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF--NTIINGLCKVGQMSEARDK 596
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K +E T ++ KEG + A+ +Y + E G++ Y + +N CK
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
++ + ++ E+G S + C + + ++L +L+ GL +
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+S++ + ++ A+ + K+ + D+ TY L+DGL K+GR+ A ++ M
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V +F ++V+ LC+ +L A K +EM + P Y +I+G+
Sbjct: 777 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 829
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 189/442 (42%), Gaps = 36/442 (8%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ Y + ++ + M +P V N LL AL R+N I LY MV G
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255
Query: 78 VSPNKFTWSLVAQILCRSGKFEVV---------LGL-LDSGIYSSVMYNLVIDFYSKKGD 127
+ + FT ++ + + G+ E G+ LD+G YS ++I KK +
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYS-----IIIQAVCKKPN 310
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS- 186
+ L EM R P +T++S++ V+ G MVE L + ++
Sbjct: 311 SNLGLELLEEM-KERGWVPSEATFTSVI----------VACVAQGNMVEALRLKEEMINC 359
Query: 187 GNDYVIQKLSDMGKTYAAE-------MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
G + + + K Y A+ +F + ++ + T +++ G +++A
Sbjct: 360 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 419
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++Y + GI + + + K EE L + V+ G + + ++
Sbjct: 420 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSW 478
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C GK E LL ++++G++ + + ++ +C +D A ++ + +
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 538
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
V TY +L+DG FK G E+A+ +FD M L + + +F +++ LC + ++ +A
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 598
Query: 419 EMLKMGHKPDEATYKQVISGFM 440
L+ G P TY ++ GF+
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFI 620
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 39/329 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ M P V + L+D +++ + A L+ M+ ++P FT++ + LC
Sbjct: 526 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 585
Query: 94 RSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G+ + + L+ G S M YN ++D + K+G+ +A EMC ++P
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE-FGVSPNV 644
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKL----------------------------- 179
TY+S+++G + + +++ + M EK L
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 704
Query: 180 LPKHFLSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
L + LS N V I D+ AA + +K+ +++I T ++ L KEGR
Sbjct: 705 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 764
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ A +Y + +GI ++ VN LC + Q E +L ++ + P + +
Sbjct: 765 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 824
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+A +G KE L +LD+GL+ D
Sbjct: 825 LIAGYFREGNLKEAFTLHDEMLDRGLVPD 853
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 189/441 (42%), Gaps = 19/441 (4%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S++ S+++ C + +G ++ L + M G + +L+ Q + A L
Sbjct: 329 SEATFTSVIVACVA-QGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 387
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSK 124
+ + DG+ PNK T+S++ + C SG E L +GI SV N ++ Y K
Sbjct: 388 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447
Query: 125 KGDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ A +E C N+ TY+ ++ + K + + ++ MV + ++P
Sbjct: 448 APLWEEASKLFDEAVDCGVANIF----TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP- 502
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +S ND ++ G A +F ++ T ++ K+G ++A+ +
Sbjct: 503 NVVSYNDMILGHCRK-GNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 561
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + I D + +N LCK Q E L++ +E G+IP M + V
Sbjct: 562 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 621
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+G + + + G+ + +SL+ +C + +ID A+ ++ + LDV
Sbjct: 622 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 681
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRKAMKNHDE 419
Y L+DG K ME A +F + L+V S + ++ ++S L + A+ + +
Sbjct: 682 YSALIDGFCKRRDMESAQDLF--FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 739
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M+ D TY +I G +
Sbjct: 740 MINDRIPCDLGTYTTLIDGLL 760
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 49/461 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F D ++ +R G +P+V + N++L L ++ ++ A L+ M +D PN
Sbjct: 63 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPN 121
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLN 136
T++++ +LC G+ E +LD ++S+ NL+ +D K A+ ++
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY-KIF 180
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQK 194
E + R P TY S++DG + + + + R + EK L H + Y +I+
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR----LFEKMLDAGHNANPVVYTSLIRN 236
Query: 195 LSDMGKTYAAEMIFK----RACDEKIELQDDTCGCMLKA--------------------- 229
G+ IFK R C + L + C+ KA
Sbjct: 237 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 296
Query: 230 ----------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
L+K G+ +E I+H + ++G + Y A V+ CK + + +L
Sbjct: 297 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 356
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ E+ P V + E L KG+ L+ SSL++ +
Sbjct: 357 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ID+A + ++ K + +V T++ LLD L K + EA+ F MKE+K ++ ++
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 476
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I+++ LC +++ KA +M K G P+ TY +ISG
Sbjct: 477 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 517
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + +H + +G+ D Y + + VLCK + E L + +PCA + +
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G++++ +LL + ++G + +S++ R++D+A++L ++ K
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL-FEVMKKDAEP 120
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNH 417
+ +TY++++D L GR+EEA RI D M+ + + V I+V RLC ++L +A K
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+ + G PD TY +I G
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGL 202
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 139/365 (38%), Gaps = 68/365 (18%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ +DC G G ++ +R YGF+P V + + L+ L + + R S ++ AM
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
+ G + LD+ YN V+D + K G A++
Sbjct: 325 QQGFA-------------------------LDAR-----AYNAVVDGFCKSGKVHKAYEI 354
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L EM + + P +TY +I+DG + K
Sbjct: 355 LEEM-KEKCVQPTVATYGAIVDG----------------------------------LAK 379
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ + + Y M+F+ A + IEL ++ K GR+ EA I + ++G+T
Sbjct: 380 IDRLDEAY---MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ + ++ L K + E + + E P S + C K+ +
Sbjct: 437 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 496
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ +GL+ + ++++ I A +L + + G D A+++ L++G+
Sbjct: 497 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 556
Query: 375 RMEEA 379
R EA
Sbjct: 557 RAMEA 561
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 204/456 (44%), Gaps = 31/456 (6%)
Query: 12 SDALSLVL----------DCYSHKGLF---------MDGLEVYRMM---RVYGFVPAVSA 49
SDA+ +VL D +S+ L + LE+ MM R G P V +
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI 109
N +L+ +++ + A Y M+ G+ P+ T+S + LC++ + + +L++ +
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263
Query: 110 YSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ VM YN ++ Y G A L +M + P TYSS+++ + ++
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRS 322
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ +I M ++ L P ++ ++Q + G + I+
Sbjct: 323 TEARKIFDSMTKRGLEPD--IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ A +K+ +V +A+ ++ + + G+ Y ++VLCK ++ +++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + + C KW + EEL+ +LD+G+ L++ +S+++ +C ++ ++
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L + ++ D+ TY+ L+DG G+M+EA ++ M + V ++ +++
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + + A+ EM+ G P+ TY ++ G
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/511 (20%), Positives = 206/511 (40%), Gaps = 83/511 (16%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M+ G S D +S VL+ + +G Y M G +P V ++++ AL
Sbjct: 188 MMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALC 247
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM 114
+ + A + MV++GV P+ T++ + C SG+ + +G L G+ +V+
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 307
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+ ++++ K G A + M R L P +TY ++L G ++ L
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV + P H + + +I + K A ++F + + G ++ L K
Sbjct: 367 MVRNGIQPDHHVF--NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G V +A+ + + + G+T Y + ++ LC + ++ L+ ++++RG +
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFF 484
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGL---------LLDSFCCS--------------- 329
+ + S C +G+ E E+L ++ G+ L+D C +
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 330 -----------SLMEYYCSNRQIDKAIAL------------------------------- 347
+L+ YC ++D A+AL
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604
Query: 348 ----HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY--MKELKVVSSSSFVIVV 401
++ I K L+++TY+++L GL K+ +EA+R+F + +L+ + + +F I++
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ-LETRTFNIMI 663
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
L + +A G PD TY
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 155/375 (41%), Gaps = 41/375 (10%)
Query: 70 YGAMVRDG---VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
Y M R G V+P T++++ CR+G+ LD G + + N+V KKG
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGR-------LDLGF--AALGNVV-----KKG 122
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT-EVSDRIVGLMVEKKLLPKHFL 185
R++ + T++ +L G ++T + D ++ M E +P F
Sbjct: 123 ------FRVDAI-----------TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFS 165
Query: 186 SGNDYVIQKLSDMGKTYAA-EMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQI 242
N +++ L D ++ A E++ A D D +L KEG +A
Sbjct: 166 YNN--LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
YH + +RGI Y + + LCK ++ +L +V+ G +P M + + C
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ KE L + G+ + SSLM Y C N + +A + + K D+AT
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEML 421
Y LL G G + E + D M + F I++ +++ +AM +M
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403
Query: 422 KMGHKPDEATYKQVI 436
+ G P+ Y VI
Sbjct: 404 QHGLNPNVVCYGTVI 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C L GF+ +++ R + + + GL +K+ D V+++++++
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTS-----DAMDIVLRRMTEL 157
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER---GITVRD 255
G C + ++ +LK L E R +EA+++ H++++ G
Sbjct: 158 G------------CIPDVFSYNN----LLKGLCDENRSQEALELLHMMADDRGGGSPPDV 201
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N KE ++ ++++RG +P + S +A+ C + E+L+
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ G++ D +S++ YCS+ Q +AI K+ +V TY L++ L K+GR
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 376 MEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
EA +IFD M K G +PD ATY+ +
Sbjct: 322 STEARKIFD----------------------------------SMTKRGLEPDIATYRTL 347
Query: 436 ISGF 439
+ G+
Sbjct: 348 LQGY 351
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 149/360 (41%), Gaps = 43/360 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ MR +G P V ++D L + + A + M+ +G++PN ++ + LC
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 94 RSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
K+ E++L +LD GI +++ +N +ID + K+G + ++L ++ + P
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFDLMVRIGVKPDI 516
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY++++DG K + + +++ MV + P G +I + + A +F
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT--LINGYCRVSRMDDALALF 574
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
K + T +L+ L R A ++Y I++ G + S Y ++ LCK
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ +E + +++ + + + G+ E ++L +A GL+ D
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD---- 690
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
V TY ++ + L + G +EE +F M+E
Sbjct: 691 -------------------------------VRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 239 AIQIYHLISERG---ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ Y+ ++ G +T Y + C+ + + L +VV++G+ A+ +
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 296 FVASQCGKGKWKEVEEL-LSAVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKIEK 353
+ C + + ++ L + + G + D F ++L++ C NR + LH+ +
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 354 LKG--SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
G DV +Y+ +L+G FK+G ++A + M + ++ ++ +++ LC + +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KAM+ + M+K G PD TY ++ G+
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGY 281
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 10/289 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV P+ T++ + C +GK + LL S +
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V Y +I+ Y + A EM + ++P TY+ IL G +T
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITYNIILQGLFHTRRTA 603
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + V + L LS + ++ L T A +F+ C ++L+ T
Sbjct: 604 AAKELYVSITKSGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 660
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M+ AL K GR+ EA ++ S G+ Y L ++ EE+ L + E
Sbjct: 661 IMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN 720
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
G + L+ V +G L + +K L++ S L+E
Sbjct: 721 GCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 200/473 (42%), Gaps = 44/473 (9%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
EGR + + L ++ Y D +++ + P V A L+D L E
Sbjct: 23 AEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFE 82
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVI 119
A +Y +V+ G ++F ++++ + RSG+ + + + + Y ++
Sbjct: 83 RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLV 142
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ K G A + M R LTP TY+ ++D R+ + +++ + M +
Sbjct: 143 NALGKAGRVQEARSFFDAMLE-RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF 201
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + ++ L G+ AA +F + + T ++ L K GRV+EA
Sbjct: 202 QPS--VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEA 259
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME------- 292
+++ + +RG+ V +Y + + L K + V L++++ +G+ P A
Sbjct: 260 HKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319
Query: 293 -------------LSRFVASQCGK---------------GKWKEVEELLSAVLDKGLLLD 324
+R V S C G + ++L +++ G + +
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPE 379
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +SL+ + ++ Q+D+A A+ ++E DV TY+ L+D L K G + A R+F
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
MK+ V + S+ + + L L +A+ +M +G D+A Y+ +I
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 183/433 (42%), Gaps = 48/433 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A ++++ + G +E++R M++ G P L++AL + ++ A + AM
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF 128
+ G++PN T++L+ + G+ ++ LGL G SV+ YN+++D G
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK----------K 178
GAA ++M G +P TYS++++G + + E + ++ MV++
Sbjct: 222 GAARKLFHKMT-GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280
Query: 179 LLPKHFLSGN-----------------------DYVIQKLSDMGKTYAAEMIFKRACDEK 215
LL +GN + ++ L K AA +F R +
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ + ++ + ++ G +A Q+ + E G Y + ++ L + Q +E
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+L ++ G P + +R + +G+ + L + DKG+ D+ + ++
Sbjct: 401 AVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ ++D+A+ L ++ + +D A Y +L+ + G D E ++ S
Sbjct: 461 AFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG---------DTELEAQLKHES 511
Query: 396 SFVIVVSRLCHLK 408
F+ V SRL K
Sbjct: 512 QFMPVESRLTSQK 524
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 50/443 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + V+ + H G +EV+ M+ GFVP V + + L+D L +Q ++
Sbjct: 278 GYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTG 337
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
+ M R+G++PN ++S + LCR+G+ E+ L D G + ++Y++V+
Sbjct: 338 YYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ D +D N+M + N P YSS++ R+ + + + + LM+ + P
Sbjct: 398 CCQHLDLEICYDLWNDMVH-HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICP 456
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
TC ++ S EG + EA
Sbjct: 457 NVV-------------------------------------TCTILVHGFSNEGLIGEAFL 479
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + G+ Y +N LCK ++P +V G+ D+++RGY+P + S +
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLD 359
+E L ++D+G + F +SL+ C + ++ + + L H+ E L + D
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL--TPD 597
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMKNH 417
Y L+ K M+ A+ IF M E + +S+ SFV ++ + + A
Sbjct: 598 RILYTSLIACYCKRSNMKAALEIFREM-ETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
+EM+ G P TY +I G+
Sbjct: 657 EEMMNKGLTPTVVTYTDLIIGYF 679
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/482 (18%), Positives = 177/482 (36%), Gaps = 60/482 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + V+ + +F D L Y + G + CN LL L N+I
Sbjct: 138 GSMTLPQVYATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKGLVEGNQIMYV 195
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF------------EVVLGLLDSGIYSSVM 114
L+ M G SPN +++S++ + K EV ++ Y + +
Sbjct: 196 RSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYL 255
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y L + +A++ L +C R +++++ G + + + M
Sbjct: 256 YGL-----CRAKQVKSAWNFLQMLCQ-RGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGM 309
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ +P + ++ L G + I + +L L + G
Sbjct: 310 KKCGFVPD--VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC-GLLRDVVERGYIPCAMEL 293
RV+ A +++ + ++G D Y+ V C +H E+C L D+V ++P A
Sbjct: 368 RVELAFELFKRLKDQGFK-HDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNY 426
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + + C + KE E+ ++ G+ + C+ L+ + + I +A K+ +
Sbjct: 427 SSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQ 486
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------------------ 395
++ TY V+++GL K + + IF M + V +
Sbjct: 487 FGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQE 546
Query: 396 ------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
++ +++ LCH +L + M M+ G PD Y +I+
Sbjct: 547 AFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIA 606
Query: 438 GF 439
+
Sbjct: 607 CY 608
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 194/441 (43%), Gaps = 17/441 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G S LS++++C+S G V + G+ P V L+ L + +I
Sbjct: 101 NGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQ 160
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVID 120
A + +V G NK ++ + LC+ G+ L LL D + VMYN +ID
Sbjct: 161 ALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID 220
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K AFD +EM + ++P TY++++ G K + + + M+ + +
Sbjct: 221 SMCKVKLVNEAFDLYSEMV-SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENIN 279
Query: 181 PKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P N Y L D + A+ + + I+ T ++ V
Sbjct: 280 P------NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A I++ IS+RG+ Y ++ CK + +E L +++ IP + +
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C GK +L+ + D+G+ D +S+++ C N Q+DKAIAL K++
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
D+ TY L+DGL K+GR+E+A +F D + + ++ + + ++ C +++
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513
Query: 416 NHDEMLKMGHKPDEATYKQVI 436
+M + G P+ TY+ +I
Sbjct: 514 LLSKMEENGCIPNAVTYEIII 534
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 158/347 (45%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D++ + + A LY MV G+SP+ T++ + C GK + L
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I+ ++ +N+++D + K+ A + L M + + P TY+S++D
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL-AMMMKQGIKPDVFTYNSLMDRYC 328
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + I + ++ + P + +I + K A +FK I
Sbjct: 329 LVKEVNKAKHIFNTISQRGVNPN--IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD 386
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K G++ A+++ + +RG+ Y + ++ LCK HQ ++ LL
Sbjct: 387 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 446
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + G P + V C G+ ++ + +L KG +LD +++++ +CS+
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
D+++ L K+E+ + TY++++ LF ++A ++ M
Sbjct: 507 LFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 16/290 (5%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
YS+++ R+ E ++ +V L + +I S +G+ + + +
Sbjct: 88 YSTVVSLHRQMEFNGITSDLVILSI---------------LINCFSQLGQNPLSFSVLAK 132
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
E T ++K L +G++ +A+Q + + G + Y +N LCK Q
Sbjct: 133 ILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQ 192
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
LLR V + P + + + S C E +L S ++ KG+ D ++
Sbjct: 193 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNA 252
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L+ +C ++ A L K+ + +V T+++L+DG K+ R++EA + M +
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ R C +KE+ KA + + + G P+ +Y +I GF
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 135/303 (44%), Gaps = 10/303 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D +++ M P V N L+D ++ ++ A + M++ G+ P+ FT+
Sbjct: 261 GKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTY 320
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM-C 139
+ + C + + ++ G+ ++ Y+++I + K A + EM C
Sbjct: 321 NSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHC 380
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
N N+ P TY+S++DG + K + ++V M ++ + P ++ N ++ L
Sbjct: 381 N--NIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV-PHDKITYNS-ILDALCKNH 436
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A + + DE I+ T ++ L K GR+++A ++ + +G + + Y
Sbjct: 437 QVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYT 496
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A + C +E LL + E G IP A+ + S K + + E+LL ++ +
Sbjct: 497 AMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556
Query: 320 GLL 322
GL
Sbjct: 557 GLF 559
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 159/390 (40%), Gaps = 54/390 (13%)
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMY 115
N+ L S + + P+ F + + L +S + V+ L +GI S V+
Sbjct: 51 NKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVIL 110
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIV 171
+++I+ +S+ G +F L ++ P T ++++ G + ++ + D++V
Sbjct: 111 SILINCFSQLGQNPLSFSVLAKILK-MGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169
Query: 172 GLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
L L+ Y +I L +G+T AA + +R + ++ ++ +
Sbjct: 170 ALGFH--------LNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 221
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
+ K V EA +Y + +GI+ Y A ++ C + ++ L ++ P
Sbjct: 222 MCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPN 281
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ V C + + KE + +L+ ++ +G+ D F +SLM+ YC ++++KA +
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKE 409
I + + ++ +Y +++ G C +K+
Sbjct: 342 TISQRGVNPNIHSYSIMIHGF----------------------------------CKIKK 367
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +AM EM PD TY +I G
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 190/417 (45%), Gaps = 18/417 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G E ++ YGF ++ +CN LL L +++E +Y M++ + N ++++V
Sbjct: 104 GFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVN 163
Query: 91 ILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDR---LNEMCNGR 142
LC+ GK +V+ + G+ +V+ YN +ID Y K G G + L EM +
Sbjct: 164 GLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV-AK 222
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P TY+ ++DG + E + R+ G M + L P + + +I L GK
Sbjct: 223 GICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN--VVTYNILINGLCSDGKVD 280
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + +E T ++ K V EAI +++ + ++G+ Y +
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ CK+ + E+ L +++RG P + +A C KG K L++ ++ K L
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS 400
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D + L++ C + KA+ L ++ + + TY+ L+DG ++G + A+ +
Sbjct: 401 ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIV 460
Query: 383 FDYM----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
M K+ VV+ + +++ C L A +EML+ G P+ TY+ +
Sbjct: 461 RTRMERKGKQANVVTHN---VLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + + ++D Y G D +Y MM G P VS N L+ L R+ +++
Sbjct: 327 QGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKA 386
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID 120
A L MV +S + T++++ LC+ G+ + LLD G+ S V YN ++D
Sbjct: 387 ARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD 446
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y ++G+ AA M + T++ ++ G + E ++ ++ M+E+ L+
Sbjct: 447 GYCREGNLRAALIVRTRM-ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505
Query: 181 PKH 183
P
Sbjct: 506 PNR 508
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + ++ M G P L+DA + + A LY M+ G+ P T++ +
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR G + L++ + V YN++ID KKG+ A L+EM + L
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFE-KGL 434
Query: 145 TPGFSTYSSILDG 157
P TY++++DG
Sbjct: 435 NPSHVTYNTLMDG 447
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
D G L C+ L+ + ++ ++ K K L+V +++++++GL K G++
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172
Query: 378 EAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAMKNH---DEMLKMGHKPDEA 430
R D ++++KV S VI + L C + + K K EM+ G P+E
Sbjct: 173 ---RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEV 229
Query: 431 TYKQVISGF 439
TY +I GF
Sbjct: 230 TYNILIDGF 238
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 190/442 (42%), Gaps = 40/442 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G GL + M G +P V N L+DA + I A L +M G+ PN ++
Sbjct: 24 GELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISY 83
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+++ LCR G + +L+ Y V YN +++ Y K+G+F A EM
Sbjct: 84 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV- 142
Query: 141 GRN-LTPGFSTYSSILDG---ARRYEKT-EVSD--RIVGLMVEKKLLPKHFLSGNDYVIQ 193
RN ++P TY+++++ AR + E D RI GL ++ +I
Sbjct: 143 -RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT--------LID 193
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S G A I + T + R++EA+ + + E+G+
Sbjct: 194 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 253
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ C++ + + + +++VE+G P A+ S + C + E +L
Sbjct: 254 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 313
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFK 372
+LD GL D F ++L+ YC ++KA+ LH ++ KG L D TY VL++GL K
Sbjct: 314 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH-KGFLPDAVTYSVLINGLNK 372
Query: 373 DGRMEEAVRI-FDYMKELKVVSS---------------SSFVIVVSRLCHLKELRKAMKN 416
R EA R+ F + E V S S V ++ C + +A +
Sbjct: 373 QARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRV 432
Query: 417 HDEMLKMGHKPDEATYKQVISG 438
+ M++ HKP EA Y +I G
Sbjct: 433 FESMVERNHKPGEAVYNVIIHG 454
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 169/373 (45%), Gaps = 9/373 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGD 127
M+R VSPN +T++++ + C G+ + LG + + + V YN +ID Y K G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
AF L M + + + P +Y+ I++G R + + I+ M K P
Sbjct: 61 IDEAFGLLKSMSS-KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY- 118
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ G + A +I + T ++ ++ K + A++ + +
Sbjct: 119 -NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
RG+ + Y ++ ++ E +L ++ E G+ P + + F+ C + +
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E ++ +++KGL D S+++ +C ++D+A + ++ + S D TY L+
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GL + R+ EA + M ++ + ++ +++ C +L KA+ HDEM+ G
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357
Query: 427 PDEATYKQVISGF 439
PD TY +I+G
Sbjct: 358 PDAVTYSVLINGL 370
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 185/459 (40%), Gaps = 61/459 (13%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++S + Q + +S ++++ +G + E+ M GF P N LL+
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV- 113
++ A ++ MVR+GVSP+ T++ + +C++ + D G+ +
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y +ID +S++G A+ LNEM +P TY++ + G E+ E + +V
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTE-SGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MVEK L P D V +Y+ ++ ++
Sbjct: 246 MVEKGLAP-------DVV---------SYST---------------------IISGFCRK 268
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G + A Q+ + E+G++ Y + + LC+ + E C L +++++ G P
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 328
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + + C +G + L ++ KG L D+ S L+ + +A L K+
Sbjct: 329 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 388
Query: 354 LKGSLDVATYDVLLD---------------GLFKDGRMEEAVRIFDYMKELKVVSSSS-F 397
+ TYD L++ G G M EA R+F+ M E + +
Sbjct: 389 EESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVY 448
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ C L KA + EM+ G P T +I
Sbjct: 449 NVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 186/407 (45%), Gaps = 21/407 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L++ L + + A+ L MV G+ + T+ + +C+ G +
Sbjct: 5 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64
Query: 102 LGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL ++ I V +Y+ +ID K G A +EM + + P TY+ ++D
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMID 123
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + R++ M+E+++ P L+ N + + + GK + AE + CDE +
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPD-VLTFNALISASVKE-GKLFEAE----KLCDEML 177
Query: 217 E--LQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ DT M+ K R +A ++ L++ + + ++V C+ + +
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVD 233
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E LLR++ RG + + + C ++L ++ G+ D+ C+ L+
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+C N ++++A+ L I+ K LD Y++++ G+ K +++EA +F + V
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ +++S C + A +M GH+PD +TY +I G
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 400
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 135/297 (45%), Gaps = 7/297 (2%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
LTP T++++++G + + +V MV K L G ++ + MG T +
Sbjct: 6 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT--IVNGMCKMGDTKS 63
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A + + + I+ ++ L K+G +A ++ + E+GI Y ++
Sbjct: 64 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 123
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C + + LLRD++ER P + + +++ +GK E E+L +L + +
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 183
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D+ +S++ +C + + D A + L S DV T++ ++D + R++E +++
Sbjct: 184 DTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 239
Query: 384 -DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + V +++++ ++ C + L A EM+ G PD T ++ GF
Sbjct: 240 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 150/369 (40%), Gaps = 36/369 (9%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +A++D L + A L+ M+ G++PN FT++ + C G++ L
Sbjct: 78 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 137
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L I + +N +I K+G A +EM + R + P TY+S++ G
Sbjct: 138 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH-RCIFPDTVTYNSMIYGFC 196
Query: 160 RYEKTEVSDRIVGLMVEKKL-------------------------LPKHFLSGN----DY 190
++ + + + + LM + + + L N +
Sbjct: 197 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 256
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I ++ AA+ +F+ + TC +L + +++EA++++ +I
Sbjct: 257 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 316
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I + Y ++ +CK + +E L + G P + ++ CGK +
Sbjct: 317 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 376
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + D G D+ ++L+ +IDK+I L ++ S D T ++ D L
Sbjct: 377 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-L 435
Query: 371 FKDGRMEEA 379
DGR++++
Sbjct: 436 ITDGRLDKS 444
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+VE G P + + + C +G+ E L++ ++ KGL +D +++ C
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
A+ L K+E+ DV Y ++D L KDG +A +F M E + + ++
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ C A + +M++ PD T+ +IS
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 159
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E G+T + +N LC E + E L+ +V +G + V C G K
Sbjct: 3 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 62
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
LLS + + + D S++++ C + A L ++ + + +V TY+ ++
Sbjct: 63 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 122
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG GR +A R+ M E ++ +F ++S +L +A K DEML
Sbjct: 123 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182
Query: 427 PDEATYKQVISGF 439
PD TY +I GF
Sbjct: 183 PDTVTYNSMIYGF 195
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 199/505 (39%), Gaps = 84/505 (16%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++L Y KGL + L V+ M G +P++ +CN+LL+ L + E A +Y M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDF 128
+R G+ P+ F S++ C+ GK + G + + G+ + V Y+ +I+ Y GD
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 129 GAAFDRLNEMCN---GRN--------------------------------LTPGFSTYSS 153
AA L M RN L P Y
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++DG R K + + R++ M+ L F+ + +I G+ + AE + R D
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS--LINGYCKRGEIHEAEGVITRMVD 395
Query: 214 -----------------------------------EKIELQDDTCGCMLKALSKEGRVKE 238
E IE T +LK L + G +
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+QI+HL+ + G+ + Y ++ L K E L +D++ RG+ + + ++
Sbjct: 456 ALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK E EE+ + D G D +L++ YC + +A + +E+ S
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISP 575
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAM 414
+ Y+ L+ GLFK R+ E D + E+ + + ++ L C L KA
Sbjct: 576 SIEMYNSLISGLFKSRRLVEXT---DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
++ EM + G + ++SG
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGL 657
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 184/428 (42%), Gaps = 28/428 (6%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F D L+++ +M G P + LLD L++ AS L+ ++ G + ++ T+
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC+ GK E+ + D G + Y +ID Y K + G AF M
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM-E 569
Query: 141 GRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
++P Y+S++ G + + E +D + + + L+ N L D
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG-------LTPNIVTYGALID-- 620
Query: 200 KTYAAEMIFKRACDEKIELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ E + +A E+ ++ C M+ L + GR+ EA + + + G
Sbjct: 621 -GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
D+ F+ + +++ L + + +P + + +A C GK +
Sbjct: 680 ---PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
S + KG + D+F +L+ Y + +D+A L ++ + ++ TY+ L++GL K
Sbjct: 737 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
++ A R+F + + + + ++ ++ C + + A K D+M++ G P T
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVT 856
Query: 432 YKQVISGF 439
Y +I+G
Sbjct: 857 YSALINGL 864
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 189/468 (40%), Gaps = 49/468 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A +++D Y G D + + M G + CN+L++ ++ EI A + M
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
V + P+ ++++ + CR G F + +L GI +V+ YN ++ + G F
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + M + P YS++LDG + E E + + K +L + F
Sbjct: 454 DDALQIWHLMMK-XGVAPDEVGYSTLLDGLFKMENFEGASTL-----WKDILARGFTKSR 507
Query: 189 ---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I L MGK AE IF + D T ++ K V +A ++
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ I+ Y + ++ L K + E LL ++ RG P + + C +G
Sbjct: 568 MEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK--------------- 350
+ + + GL + CS+++ +ID+A L K
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 351 -------IEKLKGSLDVA----------TYDVLLDGLFKDGRMEEAVRIFDYMKELK--V 391
I+K+ SLD + Y++ + GL K G++++A R F M LK V
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFV 746
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ + +A + DEML+ G P+ TY +I+G
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + M G VP + NAL++ L + + A L+ + + G+ PN
Sbjct: 759 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 818
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++ + C+ G + L D GI SV+ Y+ +I+ K GD + LN
Sbjct: 819 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN 878
Query: 137 EM 138
+M
Sbjct: 879 QM 880
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 192/445 (43%), Gaps = 44/445 (9%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
M+ ++G P + + N++L+A N+ R A + G+SPN T++++ +I C+
Sbjct: 103 NMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKK 162
Query: 96 GKFEVVLGLLD---------------------------------------SGIYSSVM-Y 115
+FE GLL G+ VM Y
Sbjct: 163 RQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCY 222
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N++ID + +KGDF A + + ++ P TY+ +++G + K + S + M
Sbjct: 223 NILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK 282
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ + P F + +I LS G AAE +F+ + + T ML L + G+
Sbjct: 283 KNEKSPDLFTFSS--MIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGK 340
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ + ++++++S+ Y + L + E+ + + ERG +
Sbjct: 341 LNKCFELWNVMSKNN-CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGL 399
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G + +L ++G LD+F SS++ C +++A+ L +++K +
Sbjct: 400 LINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNR 459
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
L+ ++ L++G + ++EEA+ + MK + S+ +++ LC + A
Sbjct: 460 RKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAY 519
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ EML+ G KPD TY +I G
Sbjct: 520 LSLKEMLEEGLKPDMITYSLLIDGL 544
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 199/443 (44%), Gaps = 11/443 (2%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNE 62
S G + ++++D + KG F+ E++ R++ P+V N +++ L + +
Sbjct: 211 SVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGK 270
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNL 117
+ + ++ M ++ SP+ FT+S + L ++G F +V +++SG+ V YN
Sbjct: 271 LDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNA 330
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++ + G F+ N M +N +Y+ ++ G +K E + L+ E+
Sbjct: 331 MLSGLFRTGKLNKCFELWNVM--SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHER 388
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
L G +I L G A I + A +E +L M+ L K+G ++
Sbjct: 389 GLKADSTTYG--LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLE 446
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A+++ H + + + + + +N + + EE +LR++ + P + + +
Sbjct: 447 QAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTII 506
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C ++ + L +L++GL D S L++ C ++D A+ L + +
Sbjct: 507 NGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLK 566
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKN 416
D+ +++++ GL +++ A+ IF M+++ V + ++ L + +A+K
Sbjct: 567 PDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKI 626
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
D +L+ G +PD +Y G
Sbjct: 627 WDRILEAGLQPDIISYNITFKGL 649
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 181/408 (44%), Gaps = 20/408 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P N+++D L + + A L M P+ T++ + LC+ +
Sbjct: 40 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L+D + S V Y+++ D K+G AF+ + EM +G TP TY++++D
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM-SGNGCTPNLVTYNTLID 158
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRAC 212
G + KTE + ++ +V +P + ++ L G+ A E + KR C
Sbjct: 159 GLCKASKTEKAYELLETLVSSGFVPD--VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 216
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T +++ L + GRV EA I+ + + T Y + VN CK + +
Sbjct: 217 TPSVI----TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTK 272
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E ++ + YI + + C +G+ E+ + + +G + + + +M
Sbjct: 273 EAQKVVDGIRGTPYIDV---YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C + ++D+A + DV +Y++++DGLFK + +EA ++ D M + +
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++++ C + A+ M+K G PD TY +ISG
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 172/414 (41%), Gaps = 37/414 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GFVP V + L D L ++ I A L M +G +PN T++ + LC++ K E
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL++ + S V Y +++D K+G A + M R TP TY+++++
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALME 228
Query: 157 GARRYEKTEVSDRIVGLMVEK----------KLLPKHFLSGNDYVIQKLSD--MGKTYAA 204
G R + + + I MV K L+ + S QK+ D G Y
Sbjct: 229 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI- 287
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
D ++ KEGR+ E ++ ++ RG Y ++
Sbjct: 288 ----------------DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 331
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + +E L + G +P + + + K KE ++L ++ G+ D
Sbjct: 332 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++LM +C + D A+ + + K D TY+ L+ GL + R+ +A +
Sbjct: 392 AVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 451
Query: 385 YMKELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M V S +++ ++ RLC L++A+ D M G + + TY I
Sbjct: 452 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 171/382 (44%), Gaps = 40/382 (10%)
Query: 78 VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
V+P+ FT++++ LC++ K E++ ++D G+ +V +N ++D K G F A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L M RN P TY++++ G + + + + +V V +P D V
Sbjct: 66 SLLAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP-------DVV- 116
Query: 193 QKLSDMGKTYA--AEMIFKRA-CDEKIELQDDTCG-----------CMLKALSKEGRVKE 238
TY+ A+ + KR DE EL + G ++ L K + ++
Sbjct: 117 --------TYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEK 168
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++ + G Y V+ LCKE + ++ ++ +++RG P + + +
Sbjct: 169 AYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALME 228
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G+ E + ++ K D+ SL+ YC + + +A + ++ ++G+
Sbjct: 229 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV---VDGIRGTP 285
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNH 417
+ Y+ L+DG K+GR++E +F+ M V + ++ IV+ LC ++ +A
Sbjct: 286 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 345
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+ M G PD +Y +I G
Sbjct: 346 ESMHSAGCVPDVVSYNIIIDGL 367
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 193/464 (41%), Gaps = 46/464 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G L++ M G P+V AL++ L R + A ++ MV
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-------GIYSSVM-------------- 114
+ + + + C+S + + ++D +Y+++M
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 308
Query: 115 ----------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
YN+V+D K G AF L M + P +Y+ I+DG
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAGCVPDVVSYNIIIDGL 367
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ K + + +++ M++ + P + ++ + + A I K ++
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTY--NTLMAQFCKEERFDDAVGILKNMIKAGVDP 425
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVNVLCKEHQPEEVCGL 277
+ T ++ LS+ R+ +A ++ H + G V + Y ++ LCKE ++ L
Sbjct: 426 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 485
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ + G + + F+ C +G+ E LLS + L D ++++ C
Sbjct: 486 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS---EMDTLRDEVSYTTVIIGLCK 542
Query: 338 NRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
Q+D+A L ++ +KG + T+++L+D K R++EA+ + + M + S
Sbjct: 543 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVI 602
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +V++ LC L ++ KA + DEM G +Y +I G
Sbjct: 603 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 646
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 185/395 (46%), Gaps = 34/395 (8%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P + NAL+D ++ + ++ M G PN T+++V LC+ GK +
Sbjct: 284 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343
Query: 104 LLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L+S + V YN++ID K A L++M + P TY++++
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLM--- 399
Query: 159 RRYEKTEVSDRIVGL---MVEKKLLPKH-----FLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++ K E D VG+ M++ + P + +SG + + + +G Y E++ +
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG----LSQTNRLGDAY--ELMHEM 453
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + T ++ L KEG +K+A+ + ++ G+ Y F++ LCKE +
Sbjct: 454 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 513
Query: 271 PEEVCGLLRDVV----ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E LL ++ E Y + L + A Q + K E+++ KGL + S
Sbjct: 514 LDEASSLLSEMDTLRDEVSYTTVIIGLCK--AEQLDRAS-KLAREMVAV---KGLCITSH 567
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L++ + +++D+A+ L + + S V TY++++ L K ++++A +FD M
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
+V+SS S+ +++ LC ++A++ +EM
Sbjct: 628 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 151/368 (41%), Gaps = 44/368 (11%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+C G ++V+D G + M G VP V + N ++D L++ ++
Sbjct: 314 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 373
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLV 118
+ A + M++ G+ P+ T++ + C+ +F+ +G+L + I + +V YN +
Sbjct: 374 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 433
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR----YEKTEVSDRIVGLM 174
I S+ G A++ ++EM + +TY++I+D + + + D + G
Sbjct: 434 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 493
Query: 175 VEKKLL-----------------PKHFLSGNDYVIQKLS--------------DMGKTYA 203
VE + LS D + ++S D A
Sbjct: 494 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLA 553
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
EM+ + + + T ++ A +K R+ EA+ + L+ +RG + Y +
Sbjct: 554 REMVAVKG----LCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVIT 609
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK + ++ L ++ RG + ++ + + CG+G+ KE ++L + +
Sbjct: 610 CLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEI 669
Query: 324 DSFCCSSL 331
D C L
Sbjct: 670 DDLKCRKL 677
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
++ER + Y ++ LCK + ++ +L ++V+RG P + + + C GK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 306 WKEVEELLSAVLDKGLLLDSFCCS--SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
++ LL+ + ++ CC+ +L+ C + +D+A L + DV TY
Sbjct: 61 FERAHSLLAVMAERN--CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTY 118
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELK----VVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+L DGL K GR++EA F+ +KE+ + ++ ++ LC + KA + +
Sbjct: 119 SILADGLCKRGRIDEA---FELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLET 175
Query: 420 MLKMGHKPDEATYKQVISGF 439
++ G PD TY ++ G
Sbjct: 176 LVSSGFVPDVVTYTIIVDGL 195
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 195/478 (40%), Gaps = 54/478 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + G P V LL L ++ + A + M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
PN T++ + LCR G+ + LLD G+ + + Y ++D KKGD
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+D + + + + M EK + P F +
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ AE + + + KI T ++ A KEG+ EA ++Y +
Sbjct: 296 --MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y + ++ CK+++ + + + +G P + + + CG + +
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 309 VEELLSAVLDKGLLLDS-----------------------------------FCCSSLME 333
ELL + + GL+ D+ C +L++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYDVLLDGLFKDGRMEEAVRI 382
C N ++ A+ + ++K K LD V TY++L+ GL +G+ EA +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M +V + ++ ++ LC L +A + D M P+ T+ +I+G+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 205/468 (43%), Gaps = 77/468 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++D KG + L + R M V +P V +A++D+L + A L+ M
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 77 GVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ P+ FT++ + C SG++ +++ +L+ I V+ YN +I+ + K+G F A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ +EM R + P TYSS++DG + + + ++ + LM K P + ++ N +
Sbjct: 345 EELYDEMLP-RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLI 402
Query: 192 ---------------IQKLSDMG-----KTYAA-------------------EMIFKRAC 212
+ ++++ G TY EMI C
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + TC +L L G++K+A++++ ++ + + +D D N
Sbjct: 463 PDIV-----TCDTLLDGLCDNGKLKDALEMFKVMQK---SKKDLDASHPFN--------- 505
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
G P + ++ +GK+ E EEL + +G++ D+ SS++
Sbjct: 506 ------------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C ++D+A + + S +V T+ L++G K GR+++ + +F M +V
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +++ ++ + + A+ EM+ G PD T + +++G
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 18/358 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G F + E+Y M G +P ++++D +QN + A ++ M G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
SPN T++ + C + + + + LL ++G+ + + YN +I + GD AA
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLSG--- 187
D L EM + L P T ++LDG K + + + +M + K L H +G
Sbjct: 451 DLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 188 ----NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + GK AE +++ I T M+ L K+ R+ EA Q++
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + + +N CK + ++ L ++ RG + A+ +
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G ++ ++ G+ D+ +++ S ++ +A+A+ +EKL+ S+D++
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM---LEKLQMSMDLS 684
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 202/451 (44%), Gaps = 26/451 (5%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
+SCE ++L L + KGL D ++++ M +P+V L+ + R
Sbjct: 37 ESCEA-GFGGESLKLQSGFHEIKGL-EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSS 112
L LY M R + + ++++++ + C K L D +++
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154
Query: 113 VMYNLVI-DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+++ L + D S+ DF F ++ E P T++++++G R + + ++
Sbjct: 155 LLHGLCVEDRVSEALDF---FHQMFE----TTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKA 229
M+E L P G ++ + G T +A + ++ +E + + ++ +
Sbjct: 208 DRMMEDGLQPTQITYGT--IVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVVIYSAIIDS 264
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K+GR +A ++ + E+GI Y + + C + + LL++++ER P
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + + +GK+ E EEL +L +G++ ++ SS+++ +C ++D A +
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLK 408
+ S ++ T++ L+DG R+++ + + M E +V+ ++++ ++ +
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L A+ EM+ G PD T ++ G
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K ++ A+ + I++ G+ + ++ LC E + E + E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +G+ E LL +++ GL ++++ C A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L K+E++ + +V Y ++D L KDGR +A +F M+E + ++ ++
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C A + EML+ PD TY +I+ F+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 204/456 (44%), Gaps = 31/456 (6%)
Query: 12 SDALSLVL----------DCYSHKGLF---------MDGLEVYRMM---RVYGFVPAVSA 49
SDA+ +VL D +S+ L + LE+ MM R G P V +
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI 109
N +L+ +++ + A Y M+ G+ P+ T+S + LC++ + + +L++ +
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263
Query: 110 YSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ VM YN ++ Y G A L +M + P TYSS+++ + ++
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRS 322
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ +I M ++ L P ++ ++Q + G + I+
Sbjct: 323 TEARKIFDSMTKRGLEPD--IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ A +K+ +V +A+ ++ + + G+ Y ++VLCK ++ +++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + + C KW + EEL+ +LD+G+ L++ +S+++ +C ++ ++
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 500
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
L + ++ D+ TY+ L+DG G+M+EA ++ M + V ++ +++
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + + A+ EM+ G P+ TY ++ G
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 204/511 (39%), Gaps = 83/511 (16%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M+ G S D +S VL+ + +G Y M G +P V ++++ AL
Sbjct: 188 MMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALC 247
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM 114
+ + A + MV++GV P+ T++ + C SG+ + +G L G+ +V+
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 307
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+ ++++ K G A + M R L P +TY ++L G ++ L
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV + P H + + +I + K A ++F + + G ++ L K
Sbjct: 367 MVRNGIQPDHHVF--NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G V +A+ + + + G+T Y + ++ LC + ++ L+ ++++RG +
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFF 484
Query: 294 SRFVASQCGKG-----------------------------------KWKEVEELLSAVLD 318
+ + S C +G K E +LL++++
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIAL------------------------------- 347
G+ D +L+ YC ++D A+AL
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604
Query: 348 ----HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY--MKELKVVSSSSFVIVV 401
++ I K L+++TY+++L GL K+ +EA+R+F + +L+ + + +F I++
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ-LETRTFNIMI 663
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
L + +A G PD TY
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 41/375 (10%)
Query: 70 YGAMVRDG---VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
Y M R G V+P T++++ CR+G+ + LG + + N+V KKG
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLD--LGF-------AALGNVV-----KKG 122
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT-EVSDRIVGLMVEKKLLPKHFL 185
R++ + T++ +L G ++T + D ++ M E +P F
Sbjct: 123 ------FRVDAI-----------TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFS 165
Query: 186 SGNDYVIQKLSDMGKTYAA-EMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQI 242
N +++ L D ++ A E++ A D D +L KEG +A
Sbjct: 166 YNN--LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
YH + +RGI Y + + LCK ++ +L +V+ G +P M + + C
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ KE L + G+ + SSLM Y C N + +A + + K D+AT
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEML 421
Y LL G G + E + D M + F I++ +++ +AM +M
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403
Query: 422 KMGHKPDEATYKQVI 436
+ G P+ Y VI
Sbjct: 404 QHGLNPNVVCYGTVI 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C L GF+ +++ R + + + GL +K+ D V+++++++
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTS-----DAMDIVLRRMTEL 157
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER---GITVRD 255
G C + ++ +LK L E R +EA+++ H++++ G
Sbjct: 158 G------------CIPDVFSYNN----LLKGLCDENRSQEALELLHMMADDRGGGSPPDV 201
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N KE ++ ++++RG +P + S +A+ C + E+L+
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ G++ D +S++ YCS+ Q +AI K+ +V TY L++ L K+GR
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 376 MEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
EA +IFD M K G +PD ATY+ +
Sbjct: 322 STEARKIFD----------------------------------SMTKRGLEPDIATYRTL 347
Query: 436 ISGF 439
+ G+
Sbjct: 348 LQGY 351
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 149/360 (41%), Gaps = 43/360 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ MR +G P V ++D L + + A + M+ +G++PN ++ + LC
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 94 RSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
K+ E++L +LD GI +++ +N +ID + K+G + ++L ++ + P
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFDLMVRIGVKPDI 516
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY++++DG K + + +++ MV + P G +I + + A +F
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT--LINGYCRVSRMDDALALF 574
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
K + T +L+ L R A ++Y I++ G + S Y ++ LCK
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ +E + +++ + + + G+ E ++L +A GL+ D
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD---- 690
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
V TY ++ + L + G +EE +F M+E
Sbjct: 691 -------------------------------VRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 239 AIQIYHLISERG---ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ Y+ ++ G +T Y + C+ + + L +VV++G+ A+ +
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 296 FVASQCGKGKWKEVEEL-LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-HIKIEK 353
+ C + + ++ L + + G + D F ++L++ C + +A+ L H+ +
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 354 LKG--SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
G DV +Y+ +L+G FK+G ++A + M + ++ ++ +++ LC + +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KAM+ + M+K G PD TY ++ G+
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGY 281
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 10/289 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV P+ T++ + C +GK + LL S +
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V Y +I+ Y + A EM + ++P TY+ IL G +T
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITYNIILQGLFHTRRTA 603
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + V + L LS + ++ L T A +F+ C ++L+ T
Sbjct: 604 AAKELYVSITKSGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 660
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M+ AL K GR+ EA ++ S G+ Y L ++ EE+ L + E
Sbjct: 661 IMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN 720
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
G + L+ V +G L + +K L++ S L+E
Sbjct: 721 GCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 178/415 (42%), Gaps = 9/415 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + R M +G P V ++++L N + A +++ G P+ T++ + +
Sbjct: 65 LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRG 124
Query: 92 LCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC GK L L D I + V Y +I+ K AF+ +EM + ++P
Sbjct: 125 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMIT-KGISP 183
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+S++ G + + + ++ MV+ K++P F + V+ L G A
Sbjct: 184 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL--NTVVDALCKEGMVAEAHD 241
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +E T ++ V A++++ + + Y +N C
Sbjct: 242 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 301
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K ++ L ++ + P + + + C G+ ++ L ++ +G + D
Sbjct: 302 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 361
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+L +Y C NR +DKA+AL IE D+ Y +LDG+ + G +E+A +F +
Sbjct: 362 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + ++ I++ LC L +A K EM K G P++ TY + GF+
Sbjct: 422 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 476
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 170/370 (45%), Gaps = 11/370 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + L ++ M GF P V L++ L + ++ A ++ M+ G+SPN T
Sbjct: 128 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVT 187
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + LC+ +++ V L++ + S +M N V+D K+G A D ++ M
Sbjct: 188 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 247
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ R + P TY++++DG + +V+ ++ MV K + + +S N +I +
Sbjct: 248 H-RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV-ANVISYNT-LINGYCKIQ 304
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A +F+ +++ T ++ L GR+++AI ++H + RG Y
Sbjct: 305 SVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 364
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ LCK ++ LL+ + + P + + C G+ ++ +L S + K
Sbjct: 365 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 424
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL + + + ++ C + +A L ++ K S + TY+++ G ++ EA
Sbjct: 425 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN---EA 481
Query: 380 VRIFDYMKEL 389
+R + ++E+
Sbjct: 482 LRTIELLEEM 491
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 157/388 (40%), Gaps = 56/388 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + GF P V L++ L + M
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------M 664
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI-----DFYSKKGDF 128
+ G+SP+ FT++ + LC +++ V LL+ + S +M N+V+ D K+G
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D ++ M R + P TY++++DG + + + ++ MV K +P +
Sbjct: 725 AIAHDVVDMMIK-RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN--VRSY 781
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I + + A + ++ + + T ++ L GR++ AI ++H +
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y ++ LCK H E LL+ + + + + C G+ +
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L S + KGL DV TY++++
Sbjct: 902 ARDLFSNLSSKGL-----------------------------------QPDVRTYNIMIH 926
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS 396
GL K G ++EA ++F M E + S+S+
Sbjct: 927 GLCKRGLLDEANKLFRKMDENDIWSNST 954
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 154/393 (39%), Gaps = 52/393 (13%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + M +G P V N L+++ + A + +++ G P+ T+ +
Sbjct: 601 LSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG 660
Query: 92 LCRSGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LC+ ++ GI + YN +I ++ LNEM N + + P
Sbjct: 661 LCK---------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK-IMPNVVV 710
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+S+++D + ++ +V +M+++ + P D V TY A
Sbjct: 711 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEP-------DVV---------TYTA------ 748
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
L D C + EA++++ + +G Y +N C+ +
Sbjct: 749 -------LMDGHC--------LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 793
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ GLL + +G I + + + C G+ + L ++ G + D
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L++Y C N + +A+ L IE D+ Y++ +DG+ + G +E A +F +
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 391 VVSS-SSFVIVVSRLCH---LKELRKAMKNHDE 419
+ ++ I++ LC L E K + DE
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 138/340 (40%), Gaps = 23/340 (6%)
Query: 115 YNLVIDFYSKKGDFGAAFD------RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
Y+ V+ ++ FG D +N C+ R L FS + +L + +
Sbjct: 597 YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGT 656
Query: 169 RIVGL--MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ GL M+ K + P F + +I L ++ + + + KI +
Sbjct: 657 LMNGLCKMITKGISPDIFTYNS--LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 714
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ AL KEG + A + ++ +RG+ Y A ++ C + +E + +V +G
Sbjct: 715 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 774
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + + C + + LL + +GL+ D+ ++L+ C ++ AIA
Sbjct: 775 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 834
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-------FVI 399
L ++ D+ TY +LLD L K+ + EA M LK + S+ + I
Sbjct: 835 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA------MVLLKAIEGSNLDADILVYNI 888
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +C EL A + G +PD TY +I G
Sbjct: 889 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 106/534 (19%), Positives = 178/534 (33%), Gaps = 112/534 (20%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+ V+D +G+ + +V MM G P V NAL+D +NE+ +A ++ M
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 74 V-----------------------------------RDGVSPNKFTWSLVAQILCRSGKF 98
V R ++PN T++ + LC G+
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341
Query: 99 EVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+ + L I V Y + D+ K A L + G N P Y++
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI-EGSNWDPDIQIYTT 400
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
ILDG R + E + + + K L P + + +I L G A +F
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPN--VWTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV----------- 262
D T + + + I++ + RG +V S V
Sbjct: 459 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 518
Query: 263 --NVLCKEHQPEEVCGL---------------------------------LRDVVERGYI 287
+LCK G ++
Sbjct: 519 VKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPP 578
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P ++ ++ + S + V L + + G+ D + + L+ +C R++ A ++
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY---------MKELKVVSS---- 394
K+ KL DV TY L++GL K + IF Y + E K V++
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 698
Query: 395 ----------SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
F VV LC + A D M+K G +PD TY ++ G
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 752
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 193/404 (47%), Gaps = 10/404 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P+V A NA+L AL + A + +M+ DGV+PN +T++++ + LC G +
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 102 LGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L +L +G ++V YN ++ + + G+ A +RL +M L P T++S+++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA-ERLVDMMREGGLKPNLVTFNSVVN 235
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + E + ++ MV++ L P + ++ +G ++ A +F + I
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGV--SYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + K G ++ A+ + + ERG+ + + + A ++ CK+ ++
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+R++ + P + + + C G+ E EL+ + KG+ D S+++ YC
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
N A L+ ++ + D TY L+ L ++ R+ +A +F M L +
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + +A+ HDEM+K G PD TY +I+G
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 169/401 (42%), Gaps = 20/401 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + L V R MR G P N L+ A R E+ A L M G+ PN T
Sbjct: 170 RGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVT 229
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V +C++G+ E + D + V YN ++ Y K G A EM
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMT 289
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD-- 197
+ + P T++S++ + E R VGL+ E + + L N+ L D
Sbjct: 290 R-KGIMPDVVTFTSLIHVMCKAGNLE---RAVGLVREMR---ERGLQMNEITFTALIDGF 342
Query: 198 MGKTYAAEMIFK----RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
K + + + R C +I+ ++ GR+ EA ++ + +G+
Sbjct: 343 CKKGFLDDALLAVREMRQC--RIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP 400
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ CK L + ++E G +P A+ S + C + + + L
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ GL D +SL++ +C +++A++LH ++ K DV TY VL++GL K
Sbjct: 461 KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
R +EA R+ + + V ++ + R C EL+ +
Sbjct: 521 ARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVL 561
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 42/381 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++D + KG D L R MR P+V NAL++ + A L M
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 74 VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDF 128
GV P+ T+S + C++G F++ +L++G+ ++ Y+ +I ++
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G A M + L P TY+S++DG + E + + MV+ +LP +
Sbjct: 454 GDAHVLFKNMIS-LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPD--VVTY 510
Query: 189 DYVIQKLSDMGKTYAAE-MIFKRACDEKIELQ---DDTCGC-----------MLKALSKE 233
+I LS +T A+ ++FK +E + D C +LK +
Sbjct: 511 SVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMK 570
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G + EA ++Y I +R + S Y ++ C+E + + +++ G+ P +
Sbjct: 571 GLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTST 630
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ KG E ++++ +L+ C SL + S ID L++K
Sbjct: 631 ISLIRGLFEKGMVVEADQVIQQLLN---------CCSLADAEASKALID----LNLKEGN 677
Query: 354 LKGSLDVATYDVLLDGLFKDG 374
+ LDV L G+ +DG
Sbjct: 678 VDAVLDV------LHGMARDG 692
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 201/461 (43%), Gaps = 49/461 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F D ++ +R G +P+V + N++L L ++ ++ A L+ M +D PN
Sbjct: 195 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPN 253
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLN 136
T++++ +LC G+ E +LD ++S+ NL+ +D K A+ ++
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY-KIF 312
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQK 194
E + R P TY S++DG + + + + R + EK L H + Y +I+
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR----LFEKMLDAGHNANPVVYTSLIRN 368
Query: 195 LSDMGKTYAAEMIFK----RACDEKIELQDDTCGCMLKA--------------------- 229
G+ +FK R C + L + C+ KA
Sbjct: 369 FFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 428
Query: 230 ----------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
L+K G+ +E I+H + ++G + Y A V+ CK + + +L
Sbjct: 429 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 488
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ E+ P V + E L KG+ L+ SSL++ +
Sbjct: 489 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 548
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ID+A + ++ K + +V T++ LLD L K + EA+ F MKE+K ++ ++
Sbjct: 549 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 608
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I+++ LC +++ KA +M K G P+ TY +ISG
Sbjct: 609 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 649
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K G V A + +H + +G+ D Y + + VLCK + E L + +PC
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
A + + G++++ +LL + ++G + +S++ R++D+A++L
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL-F 243
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLK 408
++ K + +TY++++D L GR+EEA RI D M+ + + V I+V RLC +
Sbjct: 244 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L +A K + + G PD TY +I G
Sbjct: 304 KLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 146/382 (38%), Gaps = 73/382 (19%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ +DC G G ++ +R YGF+P V + + L+ L + + R S ++ AM
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
+ G + LD+ YN V+D + K G A++
Sbjct: 457 QQGFA-------------------------LDAR-----AYNAVVDGFCKSGKVHKAYEI 486
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L EM + + P +TY +I+DG + K
Sbjct: 487 LEEM-KEKCVQPTVATYGAIVDG----------------------------------LAK 511
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ + + Y M+F+ A + IEL ++ K GR+ EA I + ++G+T
Sbjct: 512 IDRLDEAY---MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ + ++ L K + E + + E P S + C K+ +
Sbjct: 569 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 628
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ +GL+ + ++++ I A +L + + G D A+++ L++G+
Sbjct: 629 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 688
Query: 375 RMEEAVRIFDYMKELKVVSSSS 396
R EA Y + +SSSS
Sbjct: 689 RAMEA-----YQTTVYQLSSSS 705
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 164/407 (40%), Gaps = 49/407 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + +MR F PA SA L+ AL A L M G ++ +
Sbjct: 28 DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLV 87
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ L R G+ L L+D S V+YN+ ID + K G+ A +E+ + L
Sbjct: 88 RALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL-KAQGL 146
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P +Y+S++ +V+ K +G+ A
Sbjct: 147 KPDDVSYTSMI----------------------------------WVLCKAGRLGE---A 169
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E +F + E+ M+ GR ++A ++ + ERG + + +
Sbjct: 170 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 229
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K+ + +E L +V+++ P + + + C G+ +E +L + L +
Sbjct: 230 LGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 288
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +++ C R++++A + + + D TY L+DGL K G+++EA R+F+
Sbjct: 289 LLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 348
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNH---DEMLKMGHKPD 428
M L +++ V+ S + + + H E+++ G KPD
Sbjct: 349 KM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPD 393
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 118/255 (46%)
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ D ++ + V ++L + S +I L++ + A + ++ + E+
Sbjct: 26 LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 85
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++AL++EG+V +A+ + + + Y ++ K + C ++ +G
Sbjct: 86 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C G+ E EEL + + + + ++ ++++ Y S + + A
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 205
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
L ++ + V +++ +L L K +++EA+ +F+ MK+ +SS++ I++ LC
Sbjct: 206 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLC 265
Query: 406 HLKELRKAMKNHDEM 420
+ +A + DEM
Sbjct: 266 LGGRVEEAYRILDEM 280
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 12/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+VP+V A NA+L AL + A + +M+ DGV+PN +T++++ + LC G +
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L +L +G +V+ YN ++ + + G+ A +RL M L P T++S+++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA-ERLVGMMREGGLKPNLVTFNSMVN 268
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K E + ++ MV + L P + ++ G ++ A +F + I
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGV--SYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + K G ++ A+ + + ERG+ + + + A ++ CK+ ++
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+R + + P + + + C G+ E ELL + KGL D S+++ YC
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446
Query: 337 SNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
N A L+ ++ + KG L D TY L+ L + R+ +A +F M +L +
Sbjct: 447 KNCDTHSAFELNQQMLE-KGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE 505
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + A+ HD+M+K G PD TY +I+G
Sbjct: 506 FTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 159/368 (43%), Gaps = 16/368 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + L + R MR G P V N L+ A +R E+ A L G M G+ PN T
Sbjct: 203 RGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVT 262
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + +C++GK E + D + V YN ++ Y K G A EM
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD-- 197
+ + P T++S++ + E + +V M E+ L N+ L D
Sbjct: 323 Q-KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGL------QMNEVTFTALIDGF 375
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
K + + + ++ ++ ++ GR+ EA ++ H + +G+
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 435
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y ++ CK L + ++E+G +P A+ S + CG+ + + L
Sbjct: 436 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKN 495
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ GL D F +SL++ +C ++ A++LH K+ K DV TY VL++GL K R
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 376 MEEAVRIF 383
EA ++
Sbjct: 556 AMEAQQLL 563
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 153/382 (40%), Gaps = 46/382 (12%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D + KG D L R M+ P+V NAL++ + A L M
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Query: 75 RDGVSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFG 129
G+ P+ T+S + C++ FE+ +L+ G+ ++ Y+ +I +
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A M L P TY+S++DG + E + + MV+ +LP +
Sbjct: 488 DAHVLFKNMIK-LGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPD--VVTYS 544
Query: 190 YVIQKLSDMGKTY-AAEMIFK----------------RACDEKIELQDDTCGCMLKALSK 232
+I LS + A +++FK C K EL+ + +LK
Sbjct: 545 VLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELK--SVLALLKGFCM 602
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+G + EA ++Y + +R + S Y ++ C+ + + +++ G+ P +
Sbjct: 603 KGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTS 662
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ G E ++++ +L+ YCS + + AL I +
Sbjct: 663 TISLIRGLFENGMVVEADQVIQQLLN----------------YCSLADAEASKAL-IDLN 705
Query: 353 KLKGSLDVATYDVLLDGLFKDG 374
+G++D A DV L G+ KDG
Sbjct: 706 LNEGNVD-AVLDV-LHGMAKDG 725
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 190/433 (43%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+++++C + + V M G P N L++ + EI+ A L+ M
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDF 128
VR G P+ ++S V LC+SG + L LL + G + V Y +ID K
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D L+EM + R + P TYS+IL G + + MV + ++P
Sbjct: 249 NDAMDLLSEMVD-RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF-- 305
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L G A +F+ + E T ++ ++ EA ++ ++ +
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK + +E LL ++ E+ P + S + C G+ +E
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + GLL D S+L++ C + +D+A+ L +++ K D+ Y++L++
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+F G++E A +F + + + ++ I++ L +A + +M G P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545
Query: 428 DEATYKQVISGFM 440
+ +Y +I GF+
Sbjct: 546 NSCSYNVIIQGFL 558
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 177/410 (43%), Gaps = 10/410 (2%)
Query: 35 YRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
YRM+R+ P+V L ++ ++ + L M GV+ N ++ +++ LCR
Sbjct: 81 YRMLRMNP-RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCR 139
Query: 95 SGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ +L GI ++ +N +I+ +G+ A NEM R P
Sbjct: 140 LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR-RGHQPDVI 198
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+YS++++G + T ++ +++ M EK P L +I L A +
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPN--LVAYTTIIDSLCKDTLVNDAMDLLS 256
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
D I T +L G + EA +++ + R + + V+ LCKE
Sbjct: 257 EMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEG 316
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
E + + ++G P A + + C + E +++L ++DKG +
Sbjct: 317 MVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYN 376
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L+ YC R++D+A +L +++ + + + D TY L+ GL + GR +EA+ +F M
Sbjct: 377 ILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSS 436
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ ++ ++ LC L +A+K M + +PD Y +I G
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 167/401 (41%), Gaps = 20/401 (4%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R Q D +S V++ G L++ R M G P + A ++D+L + +
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----ID 120
A L MV G+ P+ T+S + C G L + + +VM N V +D
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K+G A M + P TY++++DG + + + +++ +MV+K
Sbjct: 311 GLCKEGMVSEARCVFEAMTK-KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369
Query: 181 P---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGR 235
P + + N Y ++ D K+ EM EK EL DT +++ L + GR
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEM------SEK-ELTPDTVTYSTLMQGLCQVGR 422
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+EA+ ++ + G+ Y ++ LCK +E LL+ + E P + +
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ GK + +EL S + G+ + +++ D+A L K+E
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
+ +Y+V++ G ++ A+R+ D M + + SS
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSS 583
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 33/281 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + ++D Y + +V +M G P V + N L++ ++ +
Sbjct: 331 KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDE 390
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M ++P+ T+S + Q LC+ G+ + L L
Sbjct: 391 AKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL--------------------- 429
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
EMC+ L P TYS++LDG ++ + + +++ M E K+ P L
Sbjct: 430 ---------FKEMCSS-GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I+ + GK A+ +F + + I+ T M+K L KEG EA +++
Sbjct: 480 Y--NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ + G Y + + L+ ++V + +
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRF 578
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 182/392 (46%), Gaps = 13/392 (3%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS S LS ++ Y++ + D ++V+ MRV+GF P + AC LL++L + +
Sbjct: 149 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 208
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYS 123
+Y MVR GV PN ++++ C+SG E LL+ I+ + YN +I Y
Sbjct: 209 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 268
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPK 182
KKG A + M G ++P TY+S++ G R E + R+ +M + L P
Sbjct: 269 KKGMHYEALGIQDRMERG-GVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPG 327
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +++KL + GK A + + K+E + TC ++ A K G + A+++
Sbjct: 328 --VVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 385
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ E G+ + A ++ CK H+ + L ++++ G+ P S V S
Sbjct: 386 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 445
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA--IALHIKIEKLKGSLDV 360
+ + V L + KGL +D +L+ C +I+ A I ++ + +KG D
Sbjct: 446 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG--DS 503
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
Y L FK G+ A + D M + +++
Sbjct: 504 VVYTSLAYAYFKAGKAIAASDMLDEMDKRRLM 535
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 2/220 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
C +L +L+K ++Y + G+ + ++ CK E+ LL ++
Sbjct: 189 ACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEM 248
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN-RQ 340
R P + ++ C KG E + + G+ D +SL+ +C
Sbjct: 249 ESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVND 308
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
+++A+ L +E V TY+ +L L ++G++++A R+ + M E KV + +
Sbjct: 309 LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT 368
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C + ++ AMK +ML+ G KPD+ T+K +I GF
Sbjct: 369 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 408
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ A K G V++A Q+ + + R I Y +++ CK+ E G+ +D +ERG
Sbjct: 228 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI-QDRMERG 286
Query: 286 YI-PCAMELSRFVASQCGKGKWKEVEEL-----LSAVLD-KGLLLDSFCCSSLMEYYCSN 338
+ P + + + C +EV +L L V++ +GL +S++ C
Sbjct: 287 GVSPDIVTYNSLIYGFC-----REVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE 341
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
+I A L ++ + K D T + L++ K G M A+++ M E + +F
Sbjct: 342 GKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTF 401
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C L E+ A + EML G P +TY ++ +
Sbjct: 402 KALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 443
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 198/433 (45%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS++++C+ H G V + G+ P N L+ L + E++ + + +
Sbjct: 47 TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKV 106
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
V G ++ ++ ++ LC+ G+ + LL S VMY+ +ID K
Sbjct: 107 VAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLV 166
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+D +EM N R + P TY++++ G + + ++ M+ K + P +
Sbjct: 167 DEAYDLYSEM-NARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTY-- 223
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L GK ++ + + ++ ++ G V++A QI+ ++ +
Sbjct: 224 NTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ 283
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y +N LCK + +E LLR+++ + IP + S + C G+
Sbjct: 284 TGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ +L + +G + +SL++ C N+ +DKAIAL +K+++ + TY L+D
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403
Query: 369 GLFKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++ +F + + + + ++ +++S LC +A+ +M G P
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIP 463
Query: 428 DEATYKQVISGFM 440
+ T++ +I +
Sbjct: 464 NAVTFEIIIRSLL 476
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 147/350 (42%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++D L + + A LY M G+ P+ T++ + C +G+ GL
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ I ++ YN +ID K+G + + L M + + P YS ++DG
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTK-KGVKPDVVIYSILMDGYC 266
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + +I +MV+ + P + + N K D EM+ K + +
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR+ + + + RG Y + ++ LCK ++
Sbjct: 327 -----TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ERG P + + C G+ K+ + L +L KG +D + + ++ C
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLC 441
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
D+A+A+ K+E + T+++++ L + ++A ++ M
Sbjct: 442 KEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM 491
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 138/304 (45%), Gaps = 12/304 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G M+ + M + P + N L+D L ++ +++ + L M + GV P+ +
Sbjct: 199 GQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIY 258
Query: 86 SLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
S++ C G+ + + L ++ +G+ V YN++I+ K A + L EM +
Sbjct: 259 SILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH 318
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV--IQKLSDM 198
+N+ P TYSS++DG + + + M + P + ++ N + + K ++
Sbjct: 319 -KNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM-HHRGQPANLVTYNSLLDGLCKNQNL 376
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
K A +F + + I+ T ++ L K GR+K+ ++ + +G + Y
Sbjct: 377 DKAIA---LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTY 433
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ LCKE +E + + + G IP A+ + S K + + E+LL ++
Sbjct: 434 TVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIA 493
Query: 319 KGLL 322
KGLL
Sbjct: 494 KGLL 497
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 121/276 (43%), Gaps = 8/276 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D +G + + +M G P V + L+D E++ A ++ MV+ G
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAF 132
V+P+ ++++++ LC+ + + + LL + I +V Y+ +ID K G
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D EM + R TY+S+LDG + + + + + M E+ + P + +I
Sbjct: 346 DLTKEM-HHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY--TALI 402
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L G+ + +F+ + + T M+ L KEG EA+ + + + G
Sbjct: 403 DGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCI 462
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + L ++ + ++ LL +++ +G +P
Sbjct: 463 PNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 1/214 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G +L +L K I + + +GI +N C Q +L +++
Sbjct: 14 GKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILK 73
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
GY P + L+ + C KG+ K+ V+ +G +D L+ C +
Sbjct: 74 LGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRC 133
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
AI L IE DV Y ++DGL KD ++EA ++ M + ++ ++
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
C +L +A +EM+ P+ TY +I
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLI 227
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+IP +E + + S + V L + KG++ D S L+ +C Q+ +
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------SFVI 399
++ KI KL + + L+ GL G +++++ D KVV+ S+ I
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHD-----KVVAQGFQMDQVSYGI 120
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC + E R A+K + +PD Y +I G
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGL 160
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 200/420 (47%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ LE +M+ +P CN+LL L + N+I++A +Y MV+ + + T++++
Sbjct: 165 EALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMI 224
Query: 90 QILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
ILCR GK++ + G+ +V+ YN VI+ Y +G F AA ++ + +NL
Sbjct: 225 NILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA-SKIFKTMKDKNL 283
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--DYVIQKLSDMGKTY 202
P TY+S + + + E + ++ ++E L+P D K D+ K +
Sbjct: 284 KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNK-GDLDKAF 342
Query: 203 A--AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A EM+ + I T ++ AL E R++EA + + E+G+ Y
Sbjct: 343 AYRDEMM-----NRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N C+ ++ L ++VE+ P + + + + E EE + +G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+L D ++L++ +C N ID+A L +++ K D T++ L+ G ++ ++EEA
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ D MKE + S+ ++S +++ A++ DEML +G P TY +I G+
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 183/413 (44%), Gaps = 56/413 (13%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M VYG P V N +++ + + AS ++ M + P+ +T++ LC+ +
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERR 302
Query: 98 FE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E V+ LL+SG + ++V YN +ID KGD AF +EM N R + TY+
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMN-RGIVASVFTYN 361
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++ ++ E ++ ++ M EK + P D V TY ++
Sbjct: 362 LLIHALFLEKRIEEAEDMIKEMREKGVEP-------DVV---------TYNIQI------ 399
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ C C G K+A+ ++ + E+ I Y + ++V K ++
Sbjct: 400 -------NGYCRC--------GNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMS 444
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + ++ G +P + + + C G +LL + + ++ D ++LM
Sbjct: 445 EAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLM 504
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL--- 389
+ YC R++++A L ++++ D +Y+ L+ G K G M++A+ +FD M L
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFD 564
Query: 390 -KVVSSSSFVIVVSRLC---HLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+++ ++ + S++ H +EL + EM G PD++TY VI
Sbjct: 565 PTLLTYNALIQGYSKIGEADHAEELLR------EMQSKGITPDDSTYLYVIEA 611
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 186/432 (43%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
V+ G PN T+ +V LC+ G ++ LL+ + I ++ V+Y+ VID K
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM N + + P TYSS++ YE+ + R++ M+E+K+ P
Sbjct: 277 DDALNLFTEMEN-KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV---- 331
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
T ++ A KEG++ EA ++Y + +
Sbjct: 332 ---------------------------------TFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
R I Y + +N C + +E + ++ + P + + + C + E
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EL + +GL+ ++ ++L+ + R D A + ++ ++ TY+ LLD
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K+G++E+A+ +F+Y++ K+ + ++ I++ +C ++ + G KP
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 428 DEATYKQVISGF 439
D Y +ISGF
Sbjct: 539 DVIIYNTMISGF 550
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 179/405 (44%), Gaps = 15/405 (3%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P++ N LL A+ + + L L M R G+S N +T++++ CR + + L
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 104 LLDSGI-----YSSVMYNLVIDFY---SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
LL + S V + +++ Y + D A D++ EM P T+++++
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM----GYRPDTITFTTLI 197
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + K + +V MV++ P G V+ L G A + + K
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYG--VVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
IE ++ +L K +A+ ++ + +G+ Y + ++ LC + +
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL D++ER P + + + + +GK E E+L ++ + + D F SSL+ +
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + ++D+A + + +V TY+ L++G K R++E V +F M + +V ++
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ ++ A +M+ G P+ TY ++ G
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 163/377 (43%), Gaps = 9/377 (2%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYS 123
L+G MV+ P+ F ++ + + + KF++V+ L + GI ++ YN++I+ +
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++ A L +M P T SS+L+G ++ + +V MVE P
Sbjct: 132 RRSQISLALALLGKMMK-LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I L K A + R + T G ++ L K G + A +
Sbjct: 191 ITFTT--LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + I Y ++ LCK ++ L ++ +G P + S ++ C
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+W + LLS ++++ + + ++L++ + ++ +A L+ ++ K D+ TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
L++G R++EA +F+ M + ++ +++ C K + + ++ EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 423 MGHKPDEATYKQVISGF 439
G + TY +I GF
Sbjct: 429 RGLVGNTVTYTTLIHGF 445
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
R + DY + + ++ GL +V+ +P E ++ +++ K+
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V L + G+ + + + L+ +C QI A+AL K+ KL + T LL+
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G R+ +AV + D M E+ + +F ++ L + +A+ D M++ G +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 428 DEATYKQVISGF 439
+ TY V++G
Sbjct: 224 NLVTYGVVVNGL 235
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 202/466 (43%), Gaps = 43/466 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+L++ + KG D L M+ +G P N LL+A R+ + A L M
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFG 129
RDG++P + T++ + R G + +++S G + YN++ + G
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF +EM P TY++++D ++ + + R++ M +K + P L ++
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT--LVTHN 388
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKI------------------------ELQDDTCGC 225
V++ L GK A ++ +E + L D+ G
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 226 MLKA-----------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
LK L K R ++A ++ H +RG + Y + KE+ PE
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ER IP + + C + KE + L+ +++KGL+ D + ++
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVS 393
YC ++ A H K+ + DV T + L++GL G++++A+++F+ ++++ K V
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ +C + ++ A+ D+M G +PD TY V+S
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 189/426 (44%), Gaps = 34/426 (7%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL--YGAMVRDGVSPNKFTWSLVAQI 91
++ + R G P++ A NA+L AL R + L + +++ + PN +T++L+
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217
Query: 92 LCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C G L L + G+ +V YN +++ + +KG G A L M + P
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM-KRDGIAP 276
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY++++ R + + ++V M P L + + L GK
Sbjct: 277 TQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD--LRTYNVLAVGLCQAGKV----- 329
Query: 207 IFKRACDEKIELQDD------------TCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
DE L+D+ T ++ A K +A+++ + ++G+
Sbjct: 330 ------DEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ V LCKE + EE G L + E G P + + + + C G + L+
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ KGL +D+F ++++ C ++ + A L + D +Y ++ FK+
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503
Query: 375 RMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
E A+R++D M E K++ S S++ ++ LC ++ L++A+ +E+++ G PDE TY
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563
Query: 434 QVISGF 439
+I +
Sbjct: 564 IIIHAY 569
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 189/446 (42%), Gaps = 45/446 (10%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R+ +P V N L+DA ++ A L M GV P T ++V + LC+ G
Sbjct: 339 MERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 97 KFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K E LG L+ G+ V+ YN +ID Y K G+ AF ++EM G+ L T
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV-GKGLKMDTFTL 457
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++L + ++ E ++ ++ ++ +P G V+ A ++ +
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT--VMAAYFKEYNPEPALRLWDQM 515
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ K+ T ++K L + R+KEAI + + E+G+ ++ Y ++ CKE
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E +VE + P + + + C GK + +L + ++KG +D ++L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C +D A+ +E D TY+V+L L + GR EEA + + +
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695
Query: 392 VSSS-------------------------------------SFVIVVSRLCHLKELRKAM 414
+S S +++ ++ LC +L++A
Sbjct: 696 LSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAK 755
Query: 415 KNHDEMLKMGHKPDEATYKQVISGFM 440
DEM++ G D +TY ++ G +
Sbjct: 756 AVLDEMMQKGMPVDSSTYITLMEGLI 781
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 188/416 (45%), Gaps = 25/416 (6%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R + P N L L + N+++L L+ MV D V P+ T++++ + LC++
Sbjct: 154 MERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAH 213
Query: 97 KFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC--NGRNL 144
+ + +L D ++++M + ++ D A R+ E+ +G L
Sbjct: 214 QLRPAILMLEDMPNYGLRPDEKTFTTLMQGFI-----EEADVEGAL-RIKELMVESGCEL 267
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
T + + +++G + + E + R + E+ P + ++ L G
Sbjct: 268 TS--VSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTF--NALVNGLCRTGHIKQG 321
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ ++ EL T ++ L K G + EA++I H + R Y +
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCKE+ E L R + +G +P + + C + EL + +KG D
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
F S L+E CS R++ +A+ L ++E + +V Y+ L+DGL K+ R+ +A IFD
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ L V SS ++ +++ LC K + +A + D+M+ G KPD+ TY ++ F
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 187/399 (46%), Gaps = 15/399 (3%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGL 104
+ N L++ L ++ R+ L +G P++ T++ + LCR+G E++ +
Sbjct: 271 SVNVLVNGLCKEG--RIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328
Query: 105 LDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
L+ G V YN +I K G+ A + L+ M + R+ P TY++++ +
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVS-RDCEPNTVTYNTLIGTLCKENH 387
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
E + + ++ K +LP + + +IQ L A +F+ ++ + + T
Sbjct: 388 VEAATELARVLTSKGVLPD--VCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTY 445
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++++L E R+KEA+ + + G Y ++ LCK ++ + + +
Sbjct: 446 SILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEM 505
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G ++ + + C + +E +L+ ++ +GL D F +++++Y+C I +
Sbjct: 506 LGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKR 565
Query: 344 AIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIV 400
A + ++ L G D+ TY L+ GL K GR++ A ++ MK + V++ ++ V
Sbjct: 566 AADI-VQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM-VLTPQAYNPV 623
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC K ++AM+ EM++ G PD TYK V G
Sbjct: 624 IQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGL 662
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 13/402 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P VS N L+ AL + +++R A + M G+ P++ T++ + Q E L
Sbjct: 197 PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI 256
Query: 104 ---LLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+++SG +SV N++++ K+G A + E P T++++++G
Sbjct: 257 KELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE---EEGFCPDQVTFNALVNGLC 313
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R + ++ M+EK + + + +I L +G+ A I E
Sbjct: 314 RTGHIKQGLEMMDFMLEKGF--ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN 371
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L KE V+ A ++ +++ +G+ + + + LC E L
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ E+G P S + S C + + KE LL + G + ++L++ C N
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD--YMKELKVVSSSSF 397
++ A + ++E L S TY+ L++GL K R+EEA ++ D M+ LK ++
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK-PDKFTY 550
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C ++++A M G +PD TY +I G
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ R++ G +P V N+L+ L + +A L+ M G P++FT+S++ + L
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452
Query: 93 CRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C + + L LL S V+YN +ID K G A D ++M ++
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM-EMLGVSRS 511
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+++++G + ++ E + +++ M+ + L P F + M K + +
Sbjct: 512 SVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKF---------TYTTMLKYFCQQGD 562
Query: 208 FKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
KRA D + + C G ++ L K GRV A ++ + +G+ + Y
Sbjct: 563 IKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC-GKGKWKEVEELLSAVLDK 319
+ LCK + +E L R+++E+G P + C G G +E + +L+K
Sbjct: 623 VIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
G+L + L E CS D I L
Sbjct: 683 GILPEFPSFGFLAEGLCSLSMEDTLIQL 710
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 135/300 (45%), Gaps = 9/300 (3%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKT 201
L P FS S +LD RR S + L P + + + ++++L+ G
Sbjct: 53 LPPDFSP-SQLLDLLRRQPD---SSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSF 108
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR-DSDYYA 260
+ + ++ KI + + T L+ + + I L+ ER V+ D+ +Y
Sbjct: 109 DSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYN 168
Query: 261 F-VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+++L K ++ + V L +V P + + + C + + +L + +
Sbjct: 169 VALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNY 228
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL D ++LM+ + ++ A+ + + + L + +VL++GL K+GR+EEA
Sbjct: 229 GLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA 288
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+R F Y +E +F +V+ LC +++ ++ D ML+ G + D TY +ISG
Sbjct: 289 LR-FIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGL 347
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 125/289 (43%), Gaps = 15/289 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D S++++ + + L + + M + G V N L+D L + N +
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGD 495
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVID 120
A ++ M GVS + T++ + LC+S + E L+D I + Y ++
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK- 178
++ ++GD A D + M NG P TY +++ G + + +V+ +++ + K
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNG--CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613
Query: 179 -LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL-SKEGRV 236
L P+ + + VIQ L +T A +F+ ++ T + + L + G +
Sbjct: 614 VLTPQAY----NPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+EA+ + E+GI + LC + + L+ V+E+G
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 189/415 (45%), Gaps = 11/415 (2%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
++ + + + M V G + + L++ ++ + L G +++ G PN TW+
Sbjct: 26 YLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTT 85
Query: 88 VAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + LC G+ + +L D + + V Y +++ K G+ A +L M R
Sbjct: 86 LMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAI-KLLRMIEDR 144
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P YS+I+DG + + + + M +++ P + + +I G+
Sbjct: 145 STRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPN--VITYNTLICAFCLAGQLM 202
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + I T ++ AL KEG K A QI+H + + G+ Y +
Sbjct: 203 GAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMI 260
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N LCK + +E LLR+++ + +P + + + C G+ L++ + +G
Sbjct: 261 NGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 320
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +SL++ C N+ +DKA AL +K+++ + TY L+DGL K GR++ A +
Sbjct: 321 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 380
Query: 383 FDY-MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
F + + + + ++ +++S LC +A+ +M G P+ T++ +I
Sbjct: 381 FQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 167/424 (39%), Gaps = 51/424 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + LS++++C+ H G + + G+ P L+ L + E++
Sbjct: 39 KGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKK 98
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM- 114
+ +V N+ ++ + LC++G+ + LL + +YS+++
Sbjct: 99 LLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIID 158
Query: 115 -----------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
YN +I + G AF L+EM +N+
Sbjct: 159 GLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI-LKNIN 217
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQKLSDMGKTY 202
P T+S ++D + K + +I MV+ + P + + N K D
Sbjct: 218 PDVYTFSILIDALCKEGKN--AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 275
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
EM+ K + + T ++ L K GR+ A+ + + + RG Y + +
Sbjct: 276 LREMLHKNMVPDTV-----TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 330
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCK ++ L + ERG P + + C G+ K +EL +L KG
Sbjct: 331 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 390
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+D + + ++ C D+A+A+ K+E + T+++++ LF+ ++A ++
Sbjct: 391 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450
Query: 383 FDYM 386
M
Sbjct: 451 LHEM 454
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 45/302 (14%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G M + M + P V + L+DAL ++ + A ++ AMV+ GV+PN +++
Sbjct: 199 GQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSY 256
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+++ LC+ + + + LL ++ +V YN +ID K G +A + +NEM +
Sbjct: 257 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM-H 315
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R TY+S+LD + + + + + M E+ + P +
Sbjct: 316 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY---------------- 359
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
TY A ++ L K GR+K A +++ + +G + Y
Sbjct: 360 TYTA---------------------LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCKE +E + + + G IP A+ + S K + + E+LL ++ KG
Sbjct: 399 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458
Query: 321 LL 322
LL
Sbjct: 459 LL 460
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++K L +G VK+ + + + + Y +N LCK + LLR +
Sbjct: 82 TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMI 141
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+R P + S + C E +L S + + + + ++L+ +C Q+
Sbjct: 142 EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQL 201
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
A +L ++ + DV T+ +L+D L K+G+ A +IF M ++ V + S+ I+
Sbjct: 202 MGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIM 259
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC K + +AM EML PD TY +I G
Sbjct: 260 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 200/437 (45%), Gaps = 45/437 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V+ N L+ AL ++ + + L+ +++ GV PN FT+++ Q LC+ G + + L
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 105 LD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L G+ V+ YN VI +K A + L++M NG P TY+SI+DG
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNG-GFEPNDFTYNSIIDGYC 411
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++RI+ V K P F + ++ G A +FK + +
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCS--LVNGFCQDGDPDQAMAVFKDGLGKGLRPS 469
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++K L ++G + A+Q+ + ++E+G Y +N LCK + L+
Sbjct: 470 IIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIG 529
Query: 280 DVVERGYIP-------------------CAMELSRFVASQ----------------CGKG 304
D + +G IP A+EL + SQ C
Sbjct: 530 DAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTA 589
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K +EV E+ A+ +KG + ++++E C+++++++A+ L +++ + DV ++
Sbjct: 590 KSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFG 649
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVS--SSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ G K G ++ A +F M++ VS ++++ I++S ++ A++ EM K
Sbjct: 650 TLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK 709
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY+ +I GF
Sbjct: 710 NGCDPDNYTYRVLIDGF 726
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 199/493 (40%), Gaps = 77/493 (15%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + ++ + M ++ P+V + NA+++ L A +Y M V +
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAA---FD 133
+T+++ + CR+G+ L LL + G +S +V Y V+ + + GD A FD
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284
Query: 134 RLNEMC-----------------NG--------------RNLTPGFSTYSSILDGARRYE 162
+ E C G R + P T++ + G +
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ + R++G + + L P + + VI L + AE + + E D T
Sbjct: 345 SLDRAVRLLGCVSREGLRPD--VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFT 402
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ K+G V +A +I +G + Y + VN C++ P++ + +D +
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462
Query: 283 ERGYIPCAMELSRFVASQCGKGK--------------------W---------------K 307
+G P + + + C +G W
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ L+ + KG + D F ++L++ YC ++D AI L ++ + DV TY+ LL
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+GL K + EE + IF M E + ++ ++ LC+ K++ +A+ EM G
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642
Query: 427 PDEATYKQVISGF 439
PD ++ +I+GF
Sbjct: 643 PDVVSFGTLITGF 655
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 169/403 (41%), Gaps = 45/403 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P N+++D ++ + A+ + V G P++FT+ + C+ G +
Sbjct: 395 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 454
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ + G+ S ++YN +I ++G A +NEM + P TY+ I++
Sbjct: 455 MAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAE-KGCKPDIWTYNLIIN 513
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + ++ ++G + K +P F TY
Sbjct: 514 GLCKMGCLSDANHLIGDAITKGCIPDIF----------------TYNT------------ 545
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L D C ++ ++ AI++ + + +G+T Y +N LCK + EEV
Sbjct: 546 -LVDGYC--------RQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVME 596
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ + + E+G P + + + S C K E +LL + KGL D +L+ +C
Sbjct: 597 IFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFC 656
Query: 337 SNRQIDKAIALHIKIEK-LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+D A L +EK S ATY++++ + M+ A+R+F MK+ +
Sbjct: 657 KVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDN 716
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
++ +++ C + + K E ++ G P T+ +V++
Sbjct: 717 YTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLN 759
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 44/325 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P++ N L+ L +Q I A L M G P+ +T++L+ LC+ G
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 102 LGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L+ I + YN ++D Y ++ +A + +N M + + +TP TY+++L+
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS-QGMTPDVITYNTLLN 583
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA-----EMIFK-- 209
G + K+E I M EK P + + +I+ L + K A EM K
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPN--IITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641
Query: 210 ---------------------------RACDEKIELQDDTC--GCMLKALSKEGRVKEAI 240
R +++ ++ T ++ A S++ +K A+
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ + + G + Y ++ CK + L + +E+G+IP R +
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDS 325
C + K +E ++ ++ K ++ D+
Sbjct: 762 CVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 118/309 (38%), Gaps = 37/309 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y + +E+ M G P V N LL+ L + + ++ AM
Sbjct: 544 NTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE 603
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G +PN T++ + + LC S K A D L
Sbjct: 604 KGCAPNIITYNTIIESLCNSKKVN------------------------------EAVDLL 633
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVIQ 193
EM + LTP ++ +++ G + K D GL +EK+ H + + +I
Sbjct: 634 GEM-KSKGLTPDVVSFGTLITG---FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S+ A +F + + T ++ K G V + + E+G
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ + +N LC EH+ +E G++ +V++ +P + + F A + G + E L
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN-TIFEADKKGHITYHAYEFLY 808
Query: 314 SAVLDKGLL 322
V DK +L
Sbjct: 809 DGVRDKKIL 817
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 201/461 (43%), Gaps = 49/461 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F D ++ +R G +P+V + N++L L ++ ++ A L+ M +D PN
Sbjct: 329 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPN 387
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLN 136
T++++ +LC G+ E +LD ++S+ NL+ +D K A+ ++
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY-KIF 446
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQK 194
E + R P TY S++DG + + + + R + EK L H + Y +I+
Sbjct: 447 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR----LFEKMLDAGHNANPVVYTSLIRN 502
Query: 195 LSDMGKTYAAEMIFK----RACDEKIELQDDTCGCMLKA--------------------- 229
G+ IFK R C + L + C+ KA
Sbjct: 503 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 562
Query: 230 ----------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
L+K G+ +E I+H + ++G + Y A V+ CK + + +L
Sbjct: 563 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 622
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ E+ P V + E L KG+ L+ SSL++ +
Sbjct: 623 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 682
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ID+A + ++ K + +V T++ LLD L K + EA+ F MKE+K ++ ++
Sbjct: 683 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 742
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I+++ LC +++ KA +M K G P+ TY +ISG
Sbjct: 743 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 783
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K G V A + +H + +G+ D Y + + VLCK + E L + +PC
Sbjct: 259 FGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 318
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
A + + G++++ +LL + ++G + +S++ R++D+A++L
Sbjct: 319 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL-F 377
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLK 408
++ K + +TY++++D L GR+EEA RI D M+ + + V I+V RLC +
Sbjct: 378 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 437
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L +A K + + G PD TY +I G
Sbjct: 438 KLEEAYKIFESASQRGCNPDCVTYCSLIDGL 468
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 143/370 (38%), Gaps = 68/370 (18%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ +DC G G ++ +R YGF+P V + + L+ L + + R S ++ AM
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
+ G + LD+ Y N V+D + K G A++
Sbjct: 591 QQGFA-------------------------LDARAY-----NAVVDGFCKSGKVHKAYEI 620
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L EM + + P +TY +I+DG + K
Sbjct: 621 LEEM-KEKCVQPTVATYGAIVDG----------------------------------LAK 645
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ + + Y M+F+ A + IEL ++ K GR+ EA I + ++G+T
Sbjct: 646 IDRLDEAY---MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ + ++ L K + E + + E P S + C K+ +
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ +GL+ + ++++ I A +L + + G D A+++ L++G+
Sbjct: 763 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822
Query: 375 RMEEAVRIFD 384
R EA ++F+
Sbjct: 823 RAMEAYQVFE 832
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 165/407 (40%), Gaps = 49/407 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + +MR F PA SA L+ AL A L M G ++ +
Sbjct: 162 DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLV 221
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ L R G+ L L+D S V+YN+ ID + K G+ A+ +E+ + L
Sbjct: 222 RALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL-KAQGL 280
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P +Y+S++ +V+ K +G+ A
Sbjct: 281 KPDDVSYTSMI----------------------------------WVLCKAGRLGE---A 303
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E +F + E+ M+ GR ++A ++ + ERG + + +
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 363
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K+ + +E L +V+++ P + + + C G+ +E +L + L +
Sbjct: 364 LGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +++ C R++++A + + + D TY L+DGL K G+++EA R+F+
Sbjct: 423 LLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 482
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNH---DEMLKMGHKPD 428
M L +++ V+ S + + + H E+++ G KPD
Sbjct: 483 KM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 116/289 (40%), Gaps = 17/289 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + A + V+D + G E+ M+ P V+ A++D L + + +
Sbjct: 592 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 651
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVID 120
A L+ G+ N +S + + G+ + ++ ++ G+ +V +N ++D
Sbjct: 652 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 711
Query: 121 FYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
K + A F + EM P TYS +++G R +K + M ++
Sbjct: 712 ALVKAEEINEALVCFQSMKEM----KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
L+P + +I L+ +G A +F+R + +++ +S R
Sbjct: 768 GLVPN--VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 825
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKE---HQPEEVCGLLRDVVE 283
EA Q++ RG + + ++ L K Q V +LR++ +
Sbjct: 826 EAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLREIAK 874
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 198/456 (43%), Gaps = 44/456 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + + + M + +P V +CN LL L + ++ LA + MV G+SP+ FT+
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTY 254
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
++V L R G E L + G+ V YN +ID Y K G A EM +
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314
Query: 141 G----------------------------------RNLTPGFSTYSSILDGARRYEKTEV 166
R L P TYS+++D +
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQ-KLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+++ M+ L P F + K+ D+ + + E ++A + L T
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA---GVNLNIVTYTA 431
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L L ++GR++EA +++ + + G T+ Y + + K E+ +L ++ ++
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C + + ++ ++ ++D GL +S+ ++L++ Y + +A+
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
L +++ L + V TY VL+DGL K G +++AVR FD+M + + + ++ L
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C L +A +EML G PD+ Y +I G M
Sbjct: 612 CKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 178/406 (43%), Gaps = 16/406 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D + G+ ++ + + M G P +L+DA + ++ A L M +
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGA 130
GV+ N T++ + LC G+ E+ LL +G + +Y + Y K
Sbjct: 420 AGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEK 479
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L EM N +NL P Y + + G R + E S ++ M++ L+ N Y
Sbjct: 480 AMDILEEM-NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG------LTANSY 532
Query: 191 VIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ L D +GKT A + + D I++ T G ++ L K G V++A++ + +
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ G+ Y A ++ LCK EE L +++++G P + + + G
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E L + +++ G+ LD +SL+ + Q+ A +L ++ + D L
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICL 712
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK 412
L ++ G + EA+ + D M ++S + + V S L + +L K
Sbjct: 713 LRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHK 758
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 186/450 (41%), Gaps = 48/450 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y G+ + V+ M+ G P V N+L++ + I A M + G
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351
Query: 78 VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
+ PN T+S + C++G + + ++ G+ + Y +ID K GD AF
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411
Query: 133 DRLNEMCN-GRNLTPGFSTYSSILDG----ARRYEKTEVSDRIV--GLMVEKKLLPKHFL 185
+EM G NL TY+++LDG R E E+ ++ G + +++ F
Sbjct: 412 KLESEMQQAGVNLN--IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLF- 468
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKI-------------ELQDDT--------CG 224
+ Y+ K+ + EM K + + E++D CG
Sbjct: 469 --HGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 225 ---------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
++ A K G+ EA+ + + + GI + Y ++ LCK ++
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ G P M + + C +E + L + +LDKG+ D +SL++
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ +A++L ++ ++ LD+ Y L+ G + G+++ A + D M ++
Sbjct: 647 MKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQ 706
Query: 396 SFVIVVSRLCH-LKELRKAMKNHDEMLKMG 424
I + R + L ++ +A+ HD+M + G
Sbjct: 707 VLCICLLRKYYELGDINEALALHDDMARRG 736
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D + L D+G A F + ++ + +C +L LSK + A+ + +
Sbjct: 185 DTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVV 244
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G++ Y + L +E E L ++ +G P + + + G
Sbjct: 245 AGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTG 304
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ + D G D +SL+ +C +I +A +++ +V TY L+D
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K G + EA + F M + + + ++ ++ C + +L +A K EM + G
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424
Query: 428 DEATYKQVISGF 439
+ TY ++ G
Sbjct: 425 NIVTYTALLDGL 436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 8/185 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S + ++D Y G + + + + M+ G V L+D L + ++ A
Sbjct: 526 GLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQA 585
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYS-SVMYNLVIDF 121
+ M R+G+ PN ++ + LC++ E L LD GI ++Y +ID
Sbjct: 586 VRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDG 645
Query: 122 YSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G+ G A N M G L Y+S++ G RY + +++ ++ M+ K ++
Sbjct: 646 NMKHGNPGEALSLRNRMVEIGMELD--LCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGII 703
Query: 181 PKHFL 185
P L
Sbjct: 704 PDQVL 708
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 192/428 (44%), Gaps = 18/428 (4%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
+ +G+ E+ R MR +G +P+ + N ++ L + A L+ M G+ P+
Sbjct: 328 TEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDA 386
Query: 83 FTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNE 137
FT++++ LC+ K L L + +G+ V Y+ ++ Y G A E
Sbjct: 387 FTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTE 446
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQ 193
M G+ TP TY++++ G + D+ L+ E K ++ +S NDY +I
Sbjct: 447 M-PGKGFTPNVVTYTTLMKG---HINKAAFDKAYALLAEMK---QNGVSCNDYTYNTLIN 499
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
L +G+ + KR E T ++ K G + A +Y + +GI
Sbjct: 500 GLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP 559
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +F++ CK + +L DV +G P + + C +G ++L
Sbjct: 560 NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL 619
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+L GLL + +S + Y + + +++A+ L+ K+ K LD ATY L+DG KD
Sbjct: 620 VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKD 679
Query: 374 GRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G + A++++ M + + +F + LC ++ A K DEM ++ +P+ Y
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739
Query: 433 KQVISGFM 440
+I+G++
Sbjct: 740 NMLINGYL 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 153/360 (42%), Gaps = 15/360 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL+L CY G + +++Y M GF P V L+ + A L M +
Sbjct: 426 SLLL-CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
+GVS N +T++ + LC G+ V +L + + +++ YN +I+ + K G G+
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE---KKLLPKHFLSG 187
AF +MC + + P TY+S +DG Y KT D + ++ + K L P ++
Sbjct: 545 AFAVYQQMC-AKGIPPNIVTYTSFIDG---YCKTSCCDLALKMLNDVRCKGLRPD--IAA 598
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I G A + + + + ++EA+++Y +
Sbjct: 599 YNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMI 658
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ GI + + Y ++ K+ L ++V +G IP + + C G
Sbjct: 659 KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDID 718
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ +LL + + + + L+ Y N ++ +A LH ++ + K D TYD+L+
Sbjct: 719 DARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 181/445 (40%), Gaps = 20/445 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+GR + +V+ +G++ D + ++ M P C+ + +L + +
Sbjct: 171 KGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANR 230
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVID 120
A + M G P FT++ V +L + G+ E L + D + S V+ ++
Sbjct: 231 ALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMH 290
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y + + A D E L P TY+ ++ G E + + M + LL
Sbjct: 291 GYCLQREVRKALDIFEETLRD-GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349
Query: 181 PKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P S N++ VI+ L + A +FK D I T ++ L + +++E
Sbjct: 350 P----STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIRE 404
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ ++ ++E G+ Y++ + C +E L ++ +G+ P + + +
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
K + + LL+ + G+ + + ++L+ C ++ + + + E
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSSFVIVVSRLCHLKELRKAM 414
TY+ +++G K G M A ++ M +V+ +SF + C A+
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSF---IDGYCKTSCCDLAL 581
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
K +++ G +PD A Y +I GF
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIFGF 606
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D + + ++D +S G L++Y M G +P AL L R +I
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM 114
A L M R + PN ++++ R+GK + L D + +M
Sbjct: 720 ARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIM 768
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 197/447 (44%), Gaps = 46/447 (10%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M+ G S D +S V++ + +G Y M G +P V N+++ AL
Sbjct: 183 MMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALC 242
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM 114
+ + A + MV++GV P+ T++ + C SG+ + +G L G+ V+
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV 302
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+L++D+ K G A + M R L P +TY ++L G ++ L
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV + P H+ +F ++ A + +
Sbjct: 362 MVRNGIHPDHY----------------------VFS---------------ILICAYANQ 384
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V +A+ ++ + ++G+ Y A + +LCK + E+ +++ G P +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C KW+ EEL+ +LD+G+ L++ +S+++ +C ++ ++ L + +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
+ +V TY+ L++G G+M+EA+++ M + + ++ ++ +++ C + +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A+ EM G PD TY ++ G
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 136/311 (43%), Gaps = 37/311 (11%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C L GF+ +++ R + + + GL +K+ D V+++++++
Sbjct: 98 CRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS-----DAMDIVLRRMTEL 152
Query: 199 G---KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER---GIT 252
G ++ ++ K CDE R +EA+++ H++++ G
Sbjct: 153 GCIPNVFSYNILLKGLCDEN-------------------RSQEALELLHMMADDRGGGSP 193
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y +N KE ++ ++++RG +P + + +A+ C + E+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L+ ++ G++ D +S++ YCS+ Q +AI K+ DV TY +L+D L K
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 373 DGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+GR EA +IFD M + ++ + + + + L E+ + D M++ G PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL---DLMVRNGIHPD 370
Query: 429 EATYKQVISGF 439
+ +I +
Sbjct: 371 HYVFSILICAY 381
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 158/374 (42%), Gaps = 10/374 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL++D G M+ +++ M G P ++ LL + + L MVR
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
+G+ P+ + +S++ GK + V + G+ ++V Y VI K G
Sbjct: 365 NGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGND 189
A +M + L+PG Y+S++ G K E ++ ++ M+++ + L F +
Sbjct: 425 AMLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS-- 481
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G+ +E +F+ ++ T ++ G++ EA+++ +
Sbjct: 482 -IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y +N CK + E+ L +++ G P + + + +
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+EL + + G ++ + ++ C N+ D A+ + + + L+ T+++++D
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 370 LFKDGRMEEAVRIF 383
L K GR +EA +F
Sbjct: 661 LLKVGRNDEAKDLF 674
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 170/407 (41%), Gaps = 40/407 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+++G + V+ MR G P A++ L + + A + M+
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+G+SP ++ + LC K+ E++L +LD GI +++ +N +ID + K+G
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG-- 187
+ ++L E+ + P TY+++++G K + + +++ MV L P
Sbjct: 494 ES-EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 188 -NDY------------------------------VIQKLSDMGKTYAAEMIFKRACDEKI 216
N Y ++Q L +T AA+ ++ R +
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+++ T +L L K +A+Q++ + + + + ++ L K + +E
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L G +P + G+G +E+++L ++ D G +DS + ++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A I++ SL+ +T + +D L G+ +E R
Sbjct: 733 QRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 148/393 (37%), Gaps = 77/393 (19%)
Query: 70 YGAMVRDG---VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
Y M R G V+P+ T+ ++ CR+G+ ++
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDL-------------------------- 105
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
GF+ +++ R + + + GL +K+
Sbjct: 106 --------------------GFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT-----SD 140
Query: 187 GNDYVIQKLSDMG---KTYAAEMIFKRACDEK-----IEL----QDDTCG---------- 224
D V+++++++G ++ ++ K CDE +EL DD G
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ KEG +A YH + +RGI Y + + LCK ++ +L +V+
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G +P M + + C G+ KE L + G+ D S LM+Y C N + +A
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
+ + K ++ TY LL G G + E + D M + F I++
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ +AM +M + G P+ TY VI
Sbjct: 381 YANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 239 AIQIYHLISERG---ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ Y+ ++ G +T Y + C+ + + L +V+++G+ A+ +
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 296 FVASQCGKGKWKEVEEL-LSAVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKIEK 353
+ C + + ++ L + + G + + F + L++ C NR + LH+ +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 354 LKG--SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
G DV +Y +++G FK+G ++A + M + ++ ++ +++ LC + +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KAM+ + M+K G PD TY ++ G+
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 213/475 (44%), Gaps = 54/475 (11%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
SD L +G + +R++ G P++ CNA L+AL R ++ A ++
Sbjct: 150 SDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFD 209
Query: 72 AMVRD-GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKK 125
M V+ N+++++ + + LC++GK FE++ L +G+ +V+ YN+++D K
Sbjct: 210 EMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKS 269
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G AF M G +TP T+ +++G R E+ VG+++++ + + +
Sbjct: 270 GRVEEAFRLKGRMEQG-GMTPSVVTFGILINGLARGERFGE----VGIVLQE--MEQLGV 322
Query: 186 SGNDYVIQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
S N+ + +L G A +F +K++ T + KAL KEG ++ A +
Sbjct: 323 SPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAER 382
Query: 242 IYHLISERGITVRDSDYYAFVN-VLCKEHQPEEVCGLLRDVVERGYIP-------CAMEL 293
I + G+TV + V +L + + E V + ++V RG P C EL
Sbjct: 383 ILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMREL 442
Query: 294 SRFVASQCGKGKW----------------------------KEVEELLSAVLDKGLLLDS 325
+ Q G W KE +++ +L+KG+ LDS
Sbjct: 443 CKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDS 502
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ ++ C + ++++AI LH + + D+ T++ LL G+MEE + D
Sbjct: 503 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 562
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK + S+ ++ C K++RKA + E++ G KP+ Y +I G+
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY 617
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 187/470 (39%), Gaps = 53/470 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D G + + M G P+V L++ L R + M +
Sbjct: 260 NVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQ 319
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGA 130
GVSPN+ ++ + CR G L L D + ++V YNL+ K+G+
Sbjct: 320 LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMER 379
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGA-----RRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A L +M L+ G + + + + +R + E I MV + + P L
Sbjct: 380 AERILEDM-----LSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPL 434
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+++L GK A I+ + ++ + + T ++ L + +KEA ++
Sbjct: 435 M--TACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQT 492
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +GI + Y + CK+ + EE L D+ RG+ P + + + C GK
Sbjct: 493 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 552
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA--------------------- 344
+E LL + +GL D ++++ +C + I KA
Sbjct: 553 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612
Query: 345 -IALHIKIEKLKGSLDV-------------ATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
I + + + G++D TY L+ + G +EEA IF +E
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672
Query: 391 V-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V + + I++ C L ++ +A+ +EM G P++ TY ++ +
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY 722
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 118/307 (38%), Gaps = 43/307 (14%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYS 123
L+G M R G P+ FT++ + C GK E LLD G+ ++ Y +ID +
Sbjct: 524 LHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHC 583
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K D A + L E+ + R L P Y++++ G R + V M + P +
Sbjct: 584 KAKDIRKAKEYLTELMD-RGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTN 642
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
G+ ++ + G A+ IF +A + ++L M++ K G++ EA+ +
Sbjct: 643 VTYGS--LMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 700
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ RGI+ Y + K EE L ++V G IP + +A
Sbjct: 701 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIAR---- 756
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
CS + +DK I ++ + D Y
Sbjct: 757 ------------------------CSEV-------NSLDKDIGHTAELSSGALTKDDRMY 785
Query: 364 DVLLDGL 370
++L +G+
Sbjct: 786 NILSNGI 792
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 203/454 (44%), Gaps = 36/454 (7%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L++ + + D +E +R+M GF P+V CN +L +L + E+ L
Sbjct: 106 NSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWS 165
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLLD-SGIY-SSVMYNLVIDFYS 123
+ M+ + VSPN T++++ LC GKF+ V+L +D +G + ++V YN ++++Y
Sbjct: 166 FFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYC 225
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
KKG + AA + ++ M + + + TY+ ++D R ++ I+ M + + P
Sbjct: 226 KKGRYKAASELIDAMAS-KGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNE 284
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L GK A +F+ + T ++ G ++EA+++
Sbjct: 285 ITY--NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLC 342
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER----GYIPCAMELSRFVAS 299
++ G+ + Y A +N + K Q GL+ V+ER G + + +
Sbjct: 343 DVMVSHGLRPNEVTYGALLNGISKHAQ----FGLVSSVLERMRMDGVRVGHISYTTMIDG 398
Query: 300 QCGKGKWKEVEELL-------------------SAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
C G +E +LL + L GL+ + S+L+ YC
Sbjct: 399 LCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGN 458
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
+ +A+ + + + D T VL+ + GR+EEA D+M + + SS +F
Sbjct: 459 LKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDC 518
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++ + + KA D+M +GH P + TY+
Sbjct: 519 IIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYE 552
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 174/431 (40%), Gaps = 46/431 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L S G + + + M + FVP +L+ L R+ ++ A L G + G
Sbjct: 589 MLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKG 648
Query: 78 V-SPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAA 131
+ SPN ++ + L + G + L +L+ G+ ++ +N+++D YS+KG
Sbjct: 649 LLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKV 708
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
D L+ M R+L +TY+ +L G + ++ M+ P + +
Sbjct: 709 NDILSTM-RSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHS--L 765
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I G A ++ E ++ T ++ L + +K A + ++ G+
Sbjct: 766 ILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGV 825
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK---- 307
T Y + N + +E +L ++E GY P + + + C G K
Sbjct: 826 TPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAME 885
Query: 308 -------------------------------EVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
E +L +L+ ++ ++LM YC
Sbjct: 886 LQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYC 945
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
+ KA+ L +E+ LDVA Y+VL+ GL DG ++ A ++++ M++ + ++S
Sbjct: 946 KEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTS 1005
Query: 397 FVIVV--SRLC 405
IV+ S LC
Sbjct: 1006 IYIVLIDSFLC 1016
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
TC +L +L K+ V + + ++ + + +N LC+ + + LLR +
Sbjct: 146 TCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKM 205
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
E G+ P A+ + + C KG++K EL+ A+ KG+ D + L++ C +
Sbjct: 206 DETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRS 265
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
K + ++ K + TY+ L++GL K+G++ A ++F+ M ++ +S ++ +
Sbjct: 266 AKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTL 325
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ C + +A++ D M+ G +P+E TY +++G
Sbjct: 326 IFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNG 363
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 177/424 (41%), Gaps = 46/424 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP + L+ + ++ A Y M + G + FT S++ CR G+ E
Sbjct: 438 GLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEA 497
Query: 102 LGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+D G+ SSV ++ +ID Y GD AF ++M + +L F+
Sbjct: 498 EYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFT------- 550
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA----C 212
YE I G + E K+ H S Y I G T+ M+ +
Sbjct: 551 ----YEGLLKGLLIGGHINEAKIF-MHRPSSIPYAI------GSTFYNTMLTLTSRSGNL 599
Query: 213 DEKIELQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGI-TVRDSDYYA 260
+ L D+ T ++ L ++G++ A+ + E+G+ + + Y +
Sbjct: 600 SNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTS 659
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
V+ L KE + + D++ G P A+ + + KGK +V ++LS + +
Sbjct: 660 LVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRS 719
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L + + L+ Y + + L+ ++ + D T+ L+ G K G ++ AV
Sbjct: 720 LCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAV 779
Query: 381 RIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +++++ V V + ++VS+LC E++ A ++ +G P+ TY +
Sbjct: 780 K---FLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLF 836
Query: 437 SGFM 440
+GF+
Sbjct: 837 NGFV 840
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 172/442 (38%), Gaps = 31/442 (7%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G + L + +M +G P ALL+ + + + L S + M DGV +
Sbjct: 332 NGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHIS 391
Query: 85 WSLVAQILCRSGKFE-----------------------VVLGLLDSGIYSS-VMYNLVID 120
++ + LC++G E +V G L +G+ + V+++ +I
Sbjct: 392 YTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIY 451
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR-RYEKTEVSDRIVGLMVEKKL 179
Y K G+ A + M +++ F+ SS+L + R + E ++ V M L
Sbjct: 452 NYCKMGNLKEALNAYAVMNQSGHVSDHFT--SSVLVASFCRCGRLEEAEYFVDHMSRMGL 509
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P D +I + G A +F + T +LK L G + EA
Sbjct: 510 APSSVTF--DCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEA 567
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
H S + + Y + + + LL ++V ++P + + +A
Sbjct: 568 KIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAG 627
Query: 300 QCGKGKWKEVEELLSAVLDKGLL-LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C KGK L ++KGLL + +SL++ A+ + +
Sbjct: 628 LCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQP 687
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
D ++VLLD + G+M + I M+ + + +++ I++ + + K +
Sbjct: 688 DAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLY 747
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+EM+ G PD T+ +I G+
Sbjct: 748 NEMIIHGFAPDRLTWHSLILGY 769
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 186/396 (46%), Gaps = 15/396 (3%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG 108
+L +L + + LA L+ M++ GV +++ ++ + C S + GL+ G
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228
Query: 109 I-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ S+V YN+++ K A + N M N +T TY +++ G R E+ E++
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN-IGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC---DEKIELQDDTCG 224
RI M+ +P + ++I +L K E F AC D +
Sbjct: 288 LRITHDMIRLGFVPSE--ANCSFMIDELR---KKELVEEAFSLACKLGDLGMVPNVFAYN 342
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ L K R +A +++ ++ RG+ + Y ++ LCK E+ L + ++
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G + + C +G LLS ++ +GL + S L+ C N + A
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
+ LH ++ + + + T+ L++G KD +M+EA R+FD M + V+ + +F +++
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + +RKA + +D+M++MG KPD TY+ +ISG
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 205/486 (42%), Gaps = 75/486 (15%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ +G+ D L ++ MR G V N+L++ +Q + A
Sbjct: 368 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA 427
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDF 121
L MV++G++P ++S + LCR+G + L + GI +++ + +I+
Sbjct: 428 RGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALING 487
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ K A ++M + N+ P T++ +++G + ++ MVE L P
Sbjct: 488 FCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 546
Query: 182 KHFL-----------SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
++ SG + ++D+ +YA L + + +L L
Sbjct: 547 DNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-------------LNNFSLTALLYGL 593
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG----- 285
+EGR E ++ ++ RG+ + + V K+H E+ C L R++ E+G
Sbjct: 594 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 653
Query: 286 ------------------------------YIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y P + + + + C G E L
Sbjct: 654 IFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDG 374
+L +L + F + ++Y+ + ++KA LH + L+G L + ++++L+ GL K G
Sbjct: 714 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAG 771
Query: 375 RMEEAVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+++EA+ D M+++ S S+ ++ LC + ++ KA + +EML G KPD
Sbjct: 772 KIQEAI---DLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVV 828
Query: 431 TYKQVI 436
Y I
Sbjct: 829 AYNIFI 834
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 180/415 (43%), Gaps = 51/415 (12%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+R+ GFVP+ + C+ ++D L ++ + A L + G+ PN F ++ + LC
Sbjct: 291 THDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349
Query: 94 RSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNEMCNGRNLT 145
++ +F+ + + G+ + V Y ++I K+G D FD++ + +
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+S+++G Y K DR GL LSG V + L+ +Y+
Sbjct: 410 P----YNSLING---YCKQGSLDRARGL-----------LSG--MVKEGLTPTAASYSP- 448
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ L + G + A++++ ++ERGI + + A +N
Sbjct: 449 --------------------LIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGF 488
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + +E L +++ IP + + + C G ++ +L +++ GL D+
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ SL+ C + KA +E L+ + LL GLF++GR E ++D
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDE 608
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M V + SF I+V + K+ EM + G KPD+ Y +I
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 17/402 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V A NAL+D L + A L+ M G+ PN+ T++++ LC+ G E
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L D GI +V YN +I+ Y K+G A L+ M LTP ++YS ++
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK-EGLTPTAASYSPLIA 451
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRAC 212
G R + + M E+ ++ N+Y L + K A +F +
Sbjct: 452 GLCRNGDLSSAMELHREMAERG------IAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + + T M++ G +++A Q+Y + E G+ + Y + ++ LC
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + D+ + L+ + +G++ E L + +G+ LD + ++
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKV 391
+K+ L ++++ D Y ++D L K+ M +A+ +D M +
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYS 685
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++ + ++++ LC L A EML P++ TY
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 144/370 (38%), Gaps = 50/370 (13%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW-SLVAQILCRSG------ 96
+P N +++ IR A LY MV G+ P+ +T+ SL++ + SG
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 97 ---KFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
E +L++ ++++Y L ++G F + +EM R + +++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGLF-----REGRFTETYHLWDEMAV-RGVKLDLVSFTI 623
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------LSGNDYVIQKLS--------- 196
I+ A + E S + M E+ + P LS + +IQ L+
Sbjct: 624 IVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDG 683
Query: 197 ----------------DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
G +AE++ K + T C L + EG +++A
Sbjct: 684 YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK 743
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ H +G + + LCK + +E L+R + E G+ P + S +
Sbjct: 744 DL-HSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + EL + +L KGL D + + + + + DKA+ ++ + + +
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 361 ATYDVLLDGL 370
TY LL G+
Sbjct: 863 DTYRALLSGI 872
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 189/434 (43%), Gaps = 40/434 (9%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
R+ V++ + +KG GL ++ + GF + CN +L ++ QN+I +A
Sbjct: 233 REQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVAD 292
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
+ +VR G PN T+S + ID Y K+G+
Sbjct: 293 DYFNMVVRIGPKPNVVTFSTL------------------------------IDAYCKEGN 322
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFL 185
AF + M G +TP YS ++DG + + E R++ + ++K KL F
Sbjct: 323 LDKAFVLFDVMA-GNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFS 381
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S D + K+ D+G+ I+KR +E I +C ++K + GR+ EA ++
Sbjct: 382 SAMDAYV-KIGDLGRVIQ---IYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQ 437
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
I + G Y A + CK + L D++++ P + S + C +G
Sbjct: 438 ILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGL 497
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ +++GL + F ++L++ +C + I A+ ++ + L D TY +
Sbjct: 498 VGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTI 557
Query: 366 LLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ G + GR++EA+ +F M K+ K ++ ++ LC LK+ + D M K
Sbjct: 558 LIKGAAQFGRVDEALMLFFQMLKKDFK-PDVITYCTLIDGLCKLKKSSAGLCIFDFMCKN 616
Query: 424 GHKPDEATYKQVIS 437
PD A Y +I+
Sbjct: 617 AVAPDIAIYNVLIN 630
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 184/433 (42%), Gaps = 10/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S +D Y G +++Y+ M G P V +C+ L+ + I A L+ +
Sbjct: 379 GFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQI 438
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
++ G P+ T+S + C+SG L + I +++Y+++I+ K+G
Sbjct: 439 LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLV 498
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G A + N R L+P T +++LD R + + ++ LM L K
Sbjct: 499 GDALRFFFQAVN-RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLM--GMLNIKADTVTY 555
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I+ + G+ A M+F + + + T ++ L K + + I+ + +
Sbjct: 556 TILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCK 615
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + Y +N+ +E E GL VVERG P + + C + +
Sbjct: 616 NAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDD 675
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L + + + L ++ + L++ +C ++D A+ + K+ + ++ TY L+
Sbjct: 676 AVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIH 735
Query: 369 GLFK-DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G FK ME +++++ M E + + S+ I++ LC +++A L
Sbjct: 736 GYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLL 795
Query: 427 PDEATYKQVISGF 439
PD Y +I G+
Sbjct: 796 PDVIAYTILIRGY 808
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/432 (18%), Positives = 185/432 (42%), Gaps = 12/432 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S+++ + G ++ ++ + GF P++ +AL+ + +R
Sbjct: 406 EGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRD 465
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVID 120
LY M++ P+ +S++ LC+ G ++ G+ +V N ++D
Sbjct: 466 GFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525
Query: 121 FYSK-KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ + K GA ++ + N+ TY+ ++ GA ++ + + + + M++K
Sbjct: 526 SFCRLKCIVGAM--KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDF 583
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P +I L + K+ A IF C + ++ S+EG ++ A
Sbjct: 584 KPDVITYCT--LIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAA 641
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ ++ + ERG + + C + ++ L + P A+ + + +
Sbjct: 642 LGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDA 701
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME-YYCSNRQIDKAIALHIKIEKLKGSL 358
C +G+ + + S +L++G + S L+ Y+ S ++ + L+ ++ + +
Sbjct: 702 FCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAP 761
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
++ +Y +L+DGL K G M+EA F + ++ ++ I++ C + L +AM +
Sbjct: 762 NIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLY 821
Query: 418 DEMLKMGHKPDE 429
D ML PD
Sbjct: 822 DNMLLNRLTPDR 833
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 10/331 (3%)
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPG--FSTYSSILDGARRYEKTEVSD 168
SV+Y +I+ Y +KG F + D +C G ++P + S++D +
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+ M E+ S ++V+ + + G+ K L TC +LK
Sbjct: 227 ELCSAMREQP------FSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILK 280
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + + A ++++ G + ++ CKE ++ L + G P
Sbjct: 281 GIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTP 340
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ S + G+ ++ + LL LDKG+ LD SS M+ Y + + I ++
Sbjct: 341 DLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIY 400
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL 407
++ S +V + +L+ G ++GR+ EA +F + +L S ++ +++ C
Sbjct: 401 KRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKS 460
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
LR +++M+K +PD Y +I+G
Sbjct: 461 GNLRDGFYLYEDMIKKRCEPDTIVYSVLING 491
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/350 (19%), Positives = 141/350 (40%), Gaps = 14/350 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G L+ +LD + + ++VY +M + L+ + +
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVID 120
A L+ M++ P+ T+ + LC+ K L + D ++V +YN++I+
Sbjct: 571 ALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLIN 630
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+S++G AA + R P T+++++ +++ + + ++ M ++L
Sbjct: 631 MHSREGHLEAALGLFVHVVE-RGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLR 689
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA- 239
P +I G+ A ++F + +E E T C++ K + E+
Sbjct: 690 PNAITF--TILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESG 747
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++Y+ + E I Y ++ LCK +E R +++ +P + + +
Sbjct: 748 LKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
C G+ E L +L L D F +L EY Q+ KA A H+
Sbjct: 808 YCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEY-----QLKKAGAKHL 852
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/477 (19%), Positives = 202/477 (42%), Gaps = 53/477 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D +V++ Y GL L+ + + +G P+V N +LDAL +N+ ++
Sbjct: 102 EGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQM 161
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSV-- 113
+ +Y M RDG+ N +T++++ + LC++ + + LL D+ Y++V
Sbjct: 162 INGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVS 221
Query: 114 -----------------------MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+YN +I+ + ++ F+ NEM + P T
Sbjct: 222 SMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMA-VEGIDPDVIT 280
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY-------A 203
YS++++ E++ + L K FL G + + + K Y
Sbjct: 281 YSTVINTLSEMGNVEMALAV---------LAKMFLRGCSPNVHTFTSLMKGYFMGGRLCE 331
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A ++ R E E ++ L G++ EA+ + + G+ ++ Y ++
Sbjct: 332 ALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLID 391
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
K + ++ G +P + + V C + L+ + +
Sbjct: 392 GFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPP 451
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++ ++ ++ C + + + A+ + ++ + + +V TY+ +LDGLF R EA++I
Sbjct: 452 NTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIV 511
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++E+++ S+ ++ ++S CH + A++ ++L G KPD TY VI +
Sbjct: 512 GEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAY 568
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++V MR YG P V+ N +LD L+ R A + G + + N T++ +
Sbjct: 472 AMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILS 531
Query: 91 ILCRSGKFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C +G F+ L LL G S+ YN VI Y K+G+ A ++ +
Sbjct: 532 GFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGY 591
Query: 146 PGFSTYSSILDG 157
P TY+S+L G
Sbjct: 592 PDVFTYTSLLWG 603
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 101/248 (40%), Gaps = 5/248 (2%)
Query: 191 VIQKLSDMGKTYAAEMIFKR-ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V+ KL + A FK A + T M+K L E + + L+
Sbjct: 43 VLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLE 102
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GI+ + + +N + E+ + E G P + + + + K++ +
Sbjct: 103 GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMI 162
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ + + G+ L+ + + L++ C N ++D A L ++ D +Y ++
Sbjct: 163 NGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ + G++EEA + +K V ++ +++ C ++ + + +EM G PD
Sbjct: 223 MCRLGKVEEARELSMRIKSFVPVYNA----LINGFCREHKMEEVFELFNEMAVEGIDPDV 278
Query: 430 ATYKQVIS 437
TY VI+
Sbjct: 279 ITYSTVIN 286
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 196/447 (43%), Gaps = 30/447 (6%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A S ++ Y+ G L+++ +R ++ P A N LL+ L + ++ +A LY
Sbjct: 131 EAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYD 190
Query: 72 AMVRD----GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFY 122
M++ G + +T S++ + LC GK E L+ + V YN++ID Y
Sbjct: 191 KMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGY 250
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
KKGD A LNE+ + + P TY ++++G + + E D+++ M + L
Sbjct: 251 CKKGDLQCATRALNEL-KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL--- 306
Query: 183 HFLSGNDYVIQKLSDMGKTY-----AAEMIFKRA---CDEKIELQDDTCGCMLKALSKEG 234
+ N V + D Y AAEM+ + A C I T M+ K G
Sbjct: 307 ---NMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDIT----TYNIMINFSCKGG 359
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R++EA ++ ERG+ Y ++ CK+ + G+L + E G +
Sbjct: 360 RIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYG 419
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
F+ G+ + +++KG+ D+ + LM C +I L ++
Sbjct: 420 AFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDR 479
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
DV + L+DG ++G ++EA++IF + V + ++ C ++ A
Sbjct: 480 NVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 539
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +EM + H PDE TY VI G++
Sbjct: 540 LSCLNEMNSVHHAPDEYTYSTVIDGYV 566
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/383 (17%), Positives = 144/383 (37%), Gaps = 33/383 (8%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ G + + V+D GL + E+ R M G P ++ N +++ + I
Sbjct: 302 AARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRI 361
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
A L G+ PNKF+++ + C+ G + G+L
Sbjct: 362 EEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGML------------------ 403
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
R+ E+ +L +Y + + G + +V+ + M+EK + P
Sbjct: 404 ---------FRIAEIGEKSDLV----SYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA 450
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ + ++ L G+ A +++ D ++ ++ + G + EAI+I+
Sbjct: 451 QIY--NILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+I +G+ Y A + CK + + L ++ + P S + +
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
++ ++ + +SL+ +C + +A + ++ +V TY
Sbjct: 569 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTY 628
Query: 364 DVLLDGLFKDGRMEEAVRIFDYM 386
L+ G FK G+ E A IF+ M
Sbjct: 629 TTLVGGFFKAGKPERATSIFELM 651
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 134/333 (40%), Gaps = 23/333 (6%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L+D R E+ A ++ ++R GV P ++ + + C+ GK L
Sbjct: 483 PDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSC 542
Query: 105 LD--SGIYSSV---MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ + Y+ VID Y K+ D +A +M + P TY+S+++G
Sbjct: 543 LNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK-FKPNVITYTSLINGFC 601
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++++ M L+P + ++ GK A IF+
Sbjct: 602 KKADMIRAEKVFSGMKSFDLVPN--VVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPN 659
Query: 220 DDTCGCMLKAL--------------SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
D T ++ L SKE + + ++ G + Y + + L
Sbjct: 660 DATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCL 719
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK + LL ++ +G++ ++ + + C KGK KE ++S L+K L +
Sbjct: 720 CKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTA 779
Query: 326 FCCS-SLMEYYCSNRQIDKAIALHIKIEKLKGS 357
S +L +Y R + ++ L +E K S
Sbjct: 780 VKYSLTLDKYLYQGRLSEASVILQTLVEDSKFS 812
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 200/453 (44%), Gaps = 52/453 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY+ M YG++ V+ N ++ AL + +++ A ++ +++ G+ PN T++++ C
Sbjct: 225 VYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGAC 284
Query: 94 RSGKFEVVLGLL--------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ G ++ L L+ S +SV YN +ID + K G A + NEM ++
Sbjct: 285 KMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMK-IDIE 343
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+++++G R E + R+ MVE+ LLP + + ++ L G A
Sbjct: 344 PNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNS--IMHWLYMEGDVDGAS 401
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++F D++I L TC + + L + G + A++ + + E + + +N L
Sbjct: 402 LVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFL 461
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK------------------ 307
CK + LL + RG +P + + C +G +
Sbjct: 462 CKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNL 521
Query: 308 ----------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+V L VL + L+D+ ++L+ Y + + DKA L +
Sbjct: 522 LVYNSIINGLCKDGLVDVARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLM 581
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHL 407
+ ATY+ ++ L K G ++EA + M V ++ + VI +++ C
Sbjct: 582 QNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSA 641
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+E+ ++ HD M+ G PD+ TY+ ++S +
Sbjct: 642 EEV---IELHDYMVLKGVVPDKLTYENIVSPLL 671
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 201/466 (43%), Gaps = 43/466 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+L++ + KG D L M+ +G P N LL+A R+ + A L M
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFG 129
RDG++P + T++ + R G + +++S G + YN++ + G
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF +EM P TY++++D ++ + + R++ M +K + P L ++
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT--LVTHN 388
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKI------------------------ELQDDTCGC 225
V++ L GK A ++ +E + L D+ G
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 226 MLKA-----------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
LK L K R ++A ++ H +RG + Y + KE+ PE
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ER IP + + C + KE + L+ ++KGL+ D + ++
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVS 393
YC ++ A H K+ + DV T + L++GL G++++A+++F+ ++++ K V
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ +C + ++ A+ D+M G +PD TY V+S
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 188/426 (44%), Gaps = 34/426 (7%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL--YGAMVRDGVSPNKFTWSLVAQI 91
++ + R G P++ A NA+L AL R + L + +++ + PN +T++L+
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217
Query: 92 LCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C G L L + G+ +V YN +++ + +KG G A L M + P
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM-KRDGIAP 276
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY++++ R + + ++V M P L + + L GK
Sbjct: 277 TQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD--LRTYNVLAMGLCQAGKV----- 329
Query: 207 IFKRACDEKIELQDD------------TCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
DE L+D+ T ++ A K +A+++ + ++G+
Sbjct: 330 ------DEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ V LCKE + EE G L + E G P + + + + C G + L+
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ KGL +D+F ++++ C ++ + A L + D +Y ++ FK+
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503
Query: 375 RMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
E A+R++D M E K++ S S++ ++ LC ++ L++A+ +E ++ G PDE TY
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563
Query: 434 QVISGF 439
+I +
Sbjct: 564 IIIHAY 569
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 162/364 (44%), Gaps = 8/364 (2%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R+ +P V N L+DA ++ A L M GV P T ++V + LC+ G
Sbjct: 339 MERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 97 KFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K E LG L+ G+ V+ YN +ID Y K G+ AF ++EM G+ L T
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV-GKGLKMDTFTL 457
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++L + ++ E ++ ++ ++ +P G V+ A ++ +
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT--VMAAYFKEYNPEPALRLWDQM 515
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ K+ T ++K L + R+KEAI + E+G+ ++ Y ++ CKE
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E +VE + P + + + C GK + +L + ++KG +D ++L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C +D A+ +E D TY+V+L L + GR EEA + + +
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695
Query: 392 VSSS 395
+S S
Sbjct: 696 LSQS 699
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 11/354 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+DA + + A L MV G+ + FT + V LC+ ++E
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473
Query: 102 LGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL S + V Y V+ Y K+ + A ++M R L P STY++++
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE-RKLIPSISTYNTLIK 532
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R E+ + + + VEK L+P + + +I G A + +
Sbjct: 533 GLCRMERLKEAIDKLNEFVEKGLVPDE--TTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ TC ++ L G++ +A++++ E+G V Y + +CK +
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
D+ +G P A + +++ G+ +E +L + D G L SF C L++
Sbjct: 651 FFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFAC-PLLKPSS 709
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVA--TYDVLLDGLFKDGRMEEAVRIFDYMKE 388
++ K + E + + D A TY L+GL G+++EA + D M +
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQ 763
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 197/431 (45%), Gaps = 14/431 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L + KG+ + + M+ G P + N L+ A R I+ A+ + AM G
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAA 131
P+ +T++++A LC++GK + L D + S V YN ++D K A
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA 370
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L EM + + + T++ ++ G R + E + + +M E+ L P ++ N +
Sbjct: 371 LNLLEEMRD-KGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD-VITYNTLI 428
Query: 192 IQ--KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
K ++ K + ++ +++ T +L L KE R +EA ++ +R
Sbjct: 429 DAYCKARNVAKAF---VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQR 485
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + Y + KE++PE L ++ +R P + + C GK E
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEA 545
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ L+ ++ KGL+ D + ++ YC ++KA H K+ + DV T + L++G
Sbjct: 546 IDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNG 605
Query: 370 LFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L G++E+A+++F+ + ++ K V ++ ++ LC ++ A+ +M G +PD
Sbjct: 606 LCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPD 665
Query: 429 EATYKQVISGF 439
TY V+S
Sbjct: 666 AFTYNVVLSAL 676
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 195/432 (45%), Gaps = 43/432 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L++ + KG D L M+ +G P V N LL A R+ + A L M
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDF 128
++G++P + T++ + R G + VV + G + YN++ + G
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF +EM + ++P TY++++D +Y+++ SD +
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRS--SDAL------------------ 371
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+++++ D G ++ T ++K L +EG+++EA+ +++E
Sbjct: 372 -NLLEEMRDKG----------------VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTE 414
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y ++ CK + L+ ++V G L+ + + C + +++E
Sbjct: 415 EGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 474
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EELL + +G + D ++M Y + + A+ L ++ K K + + TY+ L+
Sbjct: 475 AEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK 534
Query: 369 GLFKDGRMEEAV-RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL G++ EA+ ++ + MK+ V +++ I++ C +L KA + H++ML+ KP
Sbjct: 535 GLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP 594
Query: 428 DEATYKQVISGF 439
D T +++G
Sbjct: 595 DVVTCNTLMNGL 606
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 186/420 (44%), Gaps = 44/420 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCL--YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P++ A NA+L AL R + L + +++ + PN +T++L+ C G L
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230
Query: 103 GLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L + G+ V+ YN ++ + +KG G A L M + P +TY++++
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM-KKEGIAPTRATYNTLVSA 289
Query: 158 ARRY----EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
R + T V + + E L + L+ L GK D
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAG------LCQAGK-----------VD 332
Query: 214 EKIELQDD------------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
E +L+D+ T ++ A K R +A+ + + ++G+ +
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
V LC+E Q EE G L+ + E G P + + + + C + L+ ++ GL
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAV 380
+D+F ++L+ C ++ ++A L ++ +G + D +Y ++ FK+ + E A+
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEEL-LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++D M + K+ S ++ ++ LC + +L +A+ +E++K G PD+ TY +I +
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 181/438 (41%), Gaps = 45/438 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N L+DA ++ A L M GV + T ++V + LCR G+ E LG
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + G+ V+ YN +ID Y K + AF ++EM L T +++L
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS-GLKMDTFTLNTLLYNLC 467
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++ E ++ ++ ++ +P G V+ K A ++ K+
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGT--VMAAYFKENKPEPALYLWDEMSKRKLTPS 525
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++K L G++ EAI + + ++G+ D+ Y ++ CKE E+
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++E + P + + + C GK ++ +L + +KG +D ++L++ C +
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE---------LK 390
+D A+ +E D TY+V+L L + GR EEA + + E
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP 705
Query: 391 VVSSS----------------------------SFVIVVSRLCHLKELRKAMKNHDEMLK 422
++ SS S+ V LC +L++A DEM++
Sbjct: 706 LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQ 765
Query: 423 MGHKPDEATYKQVISGFM 440
G D +TY ++ G +
Sbjct: 766 KGMSVDSSTYITLMEGLI 783
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 172/401 (42%), Gaps = 20/401 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ +G + L +MM G P V N L+DA + + A L MVR
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
G+ + FT + + LC+ ++E LL S + V Y V+ Y K+
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGND 189
A +EM R LTP TY++++ G K TE D++ LM +K L+P + +
Sbjct: 510 ALYLWDEMSK-RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM-KKGLVPDD--TTYN 565
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A + + + TC ++ L G++++AI+++ +E+
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G V Y + LCK+ + D+ RG P A + +++ G+ +E
Sbjct: 626 GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE-----KLKGSLDVATYD 364
+ +L + + G L + F + S ++ +K + KG D +Y+
Sbjct: 686 QNMLHKLDESGKLSERFSYPLIK---SSAEEVKTGKDPEVKSDCESGGNAKGG-DQESYN 741
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRL 404
+ L G+++EA + D M + + V SS+++ ++ L
Sbjct: 742 KSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 198/465 (42%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + + G +P+V A N +L L ++ + A ++ M RD V PN
Sbjct: 100 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PN 158
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LCR GK L + D +G++ +V+ N++ID K A
Sbjct: 159 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 218
Query: 137 EMCNGRNLTPGFSTYSSILDGARR----------YEKTEVSDRIVGLMVEKKLLPKHFLS 186
M + + TP T+SS++DG + YEK + G +V L+ F
Sbjct: 219 GM-DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 277
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
G + D K Y EM+ C + L + C+ KA
Sbjct: 278 G------RKEDGHKIYK-EMV-HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 329
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G E ++++ + E+G + Y A ++ CK + +
Sbjct: 330 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 389
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ +G+ P + + + E L G+ L+ SSL++ +
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 449
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ + + +V T++ LLD L K + EA+ F MK+LK +
Sbjct: 450 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 509
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+++ LC +++ KA EM K+G KP+ TY +ISG
Sbjct: 510 ITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 554
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 157/369 (42%), Gaps = 18/369 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y+ M G P ++ N +D +++ E L+ + G P+ ++S++
Sbjct: 282 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 341
Query: 90 QILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L ++G +E+ + + G + + YN VID + K G A+ L EM +
Sbjct: 342 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM-KVKGH 400
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGK 200
P TY S++DG + ++ D L E K + + N V L D +G+
Sbjct: 401 PPTVVTYGSVIDGLAKIDRL---DEAYMLFEEAK---SNGIKLNVVVYSSLIDGFGKVGR 454
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +I + + + T C+L AL K + EA+ + + + Y
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N LC+ + + +++ + G P + + ++ G E L S G
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 574
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEA 379
+ DS ++++E S + A AL + +LKG ++ T VLLD L K +E+A
Sbjct: 575 GIPDSASYNAMIEGLSSANKAMDAYAL-FEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633
Query: 380 VRIFDYMKE 388
+ +KE
Sbjct: 634 AIVGAVLKE 642
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
F VLCK ++ +E L + + +PCA + + GK+ E LL KG
Sbjct: 61 FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + ++ R++++A+ + ++++ +V TY++L+D L ++G++ A+
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAAL 179
Query: 381 RIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I D M+ + + V I++ RLC ++L +A + M P+ T+ +I G
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 188/420 (44%), Gaps = 11/420 (2%)
Query: 26 GLFMDGLEVYRMMRV-YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G + L +Y M + +GF P V + L+D L R +E+ L M G +PN T
Sbjct: 79 GRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVT 138
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEM- 138
++ + L G+ + LL+ + + + L+I K+G+ AAF ++EM
Sbjct: 139 YNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF 198
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
L+P T++S+LDG + ++ + + +E+ P +I LS M
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST--LIDGLSKM 256
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
K A + + + T ++ L K GR+++A+ + + + G Y
Sbjct: 257 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 316
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ K + E GLLR+++E G+ P + + C G++ E E+L +
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK-GSLDVATYDVLLDGLFKDGRME 377
+G ++ SS+++ C ++ +A+ K+ + + + V Y L+DGL K G+++
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436
Query: 378 EAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA + M + ++ +F I+++ LC + ++ M + G PD TY ++
Sbjct: 437 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 186/454 (40%), Gaps = 48/454 (10%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ +++ M P V AL+D L +Q ++ A L+ G P T++ +
Sbjct: 14 AITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMID 73
Query: 91 ILCRSGKFEVVLGLLDS-GIY--------------------------------------- 110
LC+ G+ E L L D I+
Sbjct: 74 GLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCA 133
Query: 111 -SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
++V YN +++ +G AF L +M P T+ I+ G + + E + R
Sbjct: 134 PNAVTYNTLVNALLGQGRSKEAFSLLEQMA-ANGCPPELITFGLIIKGLCKEGEIEAAFR 192
Query: 170 IVG--LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+V M+E L P + V+ L + A +FKRA + T ++
Sbjct: 193 VVDEMFMIESGLSPDVITFNS--VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
LSK ++ EA+Q+ + E G Y V+ L K + E+ +LR + + G +
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P A+ + + + + +E LL +L+ G ++L C + + D+A+ +
Sbjct: 311 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLC 405
+ + + TY ++DGL K GR+ EA+ F+ M +VV+ ++ ++ LC
Sbjct: 371 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 430
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +A + + M++ G PD T+ +I+G
Sbjct: 431 KAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 150/373 (40%), Gaps = 44/373 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VLD + +D V++ G P V + L+D L + ++ A L MV G
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAF 132
N T+S V L + G+ E V+ + D+G + +V YN +ID + K+ A
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L EM P TY+++ G R + + + I+ M + P
Sbjct: 334 GLLREMLEA-GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI-------- 384
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
TY++ ++ L K GRV EA+ + ++ +
Sbjct: 385 --------TYSS---------------------IVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 253 VRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y A ++ LCK + +E L ++ G IP + S + C G+ E
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + ++G + D ++L++ C ++D+A L ++ S D +T ++ GL
Sbjct: 476 LFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLL 535
Query: 372 KDGRMEEAVRIFD 384
+ R E+A RI D
Sbjct: 536 EVNRDEDAKRIQD 548
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 7/263 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D G D + V R MR G +P N L+D +++ +R A L M+
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ T++ + LCRSG+F+ + +LD +++ Y+ ++D K G
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M + P YS+++DG + K + + + M+ +P +
Sbjct: 402 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD--VVTFSI 459
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L D G+ +F+ + T ++ L + RV EA ++ + G
Sbjct: 460 LINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG 519
Query: 251 ITVRDSDYYAFVNVLCKEHQPEE 273
++ S ++ L + ++ E+
Sbjct: 520 LSPDRSTRRTMIHGLLEVNRDED 542
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 45/292 (15%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L K A +FK+ D+ I T G ++ L K+ RVKEA ++ +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 251 ------------------------ITVRDS------------DYYAFVNVLCKEHQPEEV 274
+T+ D Y ++ LC++H+ ++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
C LL ++ RG P A+ + V + G+G+ KE LL + G + +++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 335 YCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKE---- 388
C +I+ A + ++ ++ L DV T++ +LDGL K+ R+ +A +F E
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
VV+ S+ + +S++ + E A++ +M+++G + + TY V+ G +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDE---ALQLLAKMVELGCRANTVTYSTVVDGLL 289
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGD 127
M PN T++++ LCR GK E G +L G+ ++ +N +I+ Y K+G
Sbjct: 260 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 319
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+AF L+ M G N P TY+ +++G R K+ + ++ +V+ LLP
Sbjct: 320 VVSAFQLLSVMEKG-NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY- 377
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ G+ A IF +E T ++ L K GR+++A I +
Sbjct: 378 -NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 436
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
++GI++ + + A ++ CK + ++VC L ++VE + A + F+ + K
Sbjct: 437 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 496
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +L ++ GL+ + L+E +C + ++ + ++++ S +V TY +++
Sbjct: 497 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 556
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK--ELRKAMKNHDEMLKMGH 425
+GL +GR+EEA I M VS + F V H+K L +A + M+K G
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFG-VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 615
Query: 426 KPDEATYKQVISGFM 440
+P+ Y ++SGF+
Sbjct: 616 QPNSHIYSALLSGFV 630
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 195/461 (42%), Gaps = 53/461 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G + V+R M +G P + NAL++ ++ + A L M +
Sbjct: 273 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 332
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
PN T++ + + LCR K F ++ ++D+G+ V YN+++D + K+G
Sbjct: 333 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 392
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF+ N M N L P T+++++DG + + E ++ I+G MV+K + S ++
Sbjct: 393 AFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI------SLDEV 445
Query: 191 VIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L D +GK +F+ + + T C L AL K+ ++ EA + +
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ G+ + + C+ + +L + + G P + + C G+
Sbjct: 506 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 565
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+E E +L ++ G+ + F + L++ + ++D+A + + K + Y L
Sbjct: 566 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 625
Query: 367 LDG-------------------------------------LFKDGRMEEAVRIFDYMKEL 389
L G +F+ ++ A++I D +K+
Sbjct: 626 LSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKC 685
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
V + + +V LC + +A + +M+K G PD+A
Sbjct: 686 GVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 726
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 180/446 (40%), Gaps = 63/446 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+IQ CE DS++ + L+ +DG M GF + + LL L +
Sbjct: 63 LIQECE--DSENGVVKLMGA--------LDG------MTELGFRLSYPCYSTLLMCLAKL 106
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV------LGLLDSGIYSSVM 114
N +A +Y MV +G + V LC++G + + L G+ + V
Sbjct: 107 NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVC 166
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
+LV+ ++ D G AF +M + P TYS ++ G + E + ++ M
Sbjct: 167 TSLVLA-NCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM 225
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VEK P +TY ++ K CD G
Sbjct: 226 VEKGCQPST----------------RTYT--VLIKAKCD-------------------IG 248
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+A+++ ++ + Y ++ LC+E + EE G+ R +++ G P + +
Sbjct: 249 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 308
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSF-CCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ C +G +LLS V++KG + + LME C + KA L ++
Sbjct: 309 ALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 367
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
D TY++L+DG K+G++ A IF+ M + +F ++ LC L L +
Sbjct: 368 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 427
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISG 438
A M+K G DE T+ +I G
Sbjct: 428 ANGILGSMVKKGISLDEVTFTALIDG 453
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 171/432 (39%), Gaps = 52/432 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + +G ++ M G P AL+D L + + A+ + G+MV+
Sbjct: 378 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 437
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G+S ++ T++ + C+ GK + V L ++ + + + +N +D K
Sbjct: 438 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 497
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M L P T++ +++G R +T +S +++ M + P +
Sbjct: 498 ANAMLGKMMK-YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY--TI 554
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ AE I + T ++KA K GR+ A QI + + G
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGL--------------------------------- 277
Y A ++ + L
Sbjct: 615 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 674
Query: 278 ---LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+RD +++ +P + V C +G+ E ++L ++ GL D SS++E+
Sbjct: 675 ALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEH 733
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-------VRIFDYMK 387
YC + D + + K A+Y ++ GL +GR++EA VR +
Sbjct: 734 YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEE 793
Query: 388 ELKVVSSSSFVI 399
E++V S F++
Sbjct: 794 EVEVTPSIEFLM 805
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 191/443 (43%), Gaps = 50/443 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + V+ + H G +EV+ M+ GFVP V + + L+D L +Q ++
Sbjct: 278 GYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTG 337
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
+ M R+G++PN ++S + LCR+G+ E+ L D G + ++Y++V+
Sbjct: 338 YYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ D +D N+M + N P YSS++ R+ + + + + LMV + P
Sbjct: 398 CCQHLDLEICYDLWNDMVH-HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICP 456
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
V+ TC ++ S EG + EA
Sbjct: 457 N--------VV-----------------------------TCTILVHGFSNEGLIGEAFL 479
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + G+ Y ++ LCK ++P ++ G+ D+++RGY+P + S +
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLD 359
+E L ++D+G + F +SL+ C + ++ + + L H+ E L + D
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL--APD 597
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMKNH 417
Y L+ K M+ A+ IF M E + +S+ SFV ++ + + A
Sbjct: 598 RILYTSLIACYCKRSNMKAALEIFREM-ETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
+EM+ G P TY +I G+
Sbjct: 657 EEMMNKGLTPTVVTYTDLIVGYF 679
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/480 (18%), Positives = 185/480 (38%), Gaps = 60/480 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + V+ + +F D L Y + G + CN LL L N+I A
Sbjct: 138 GSMTLPQVYATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKRLVEGNQIMYA 195
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV-----------VLGL-LDSGIYSSVM 114
L+ M G SPN +++S++ + K + V G+ ++ Y++ +
Sbjct: 196 RSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYL 255
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y L ++K+ +A++ L +C R +++++ G + + + M
Sbjct: 256 YGLC---HAKQ--VKSAWNFLQMLCQ-RGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGM 309
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ +P + ++ L G + I + +L L + G
Sbjct: 310 KKCGFVPD--VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC-GLLRDVVERGYIPCAMEL 293
RV+ A +++ + ++G D Y+ V C +H E+C L D+V ++P A
Sbjct: 368 RVELAFELFKRLKDQGFK-HDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNY 426
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + + C + KE E+ ++ G+ + C+ L+ + + I +A K+ +
Sbjct: 427 SSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQ 486
Query: 354 L----------------------------------KGSL-DVATYDVLLDGLFKDGRMEE 378
+G + D Y +++DG K ++E
Sbjct: 487 FGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQE 546
Query: 379 AVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A R++ M E + ++ +++ LCH +L + M M+ G PD Y +I+
Sbjct: 547 AFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIA 606
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P A + ++ C + K L + +G +++C ++++ +C + Q+ KA
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
I + ++K DV +Y +L+DGL K G + + M + + S+ ++
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
LC + A + + G K D Y V+ G
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 17/441 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G +S +++++C+S GL ++ + G+ P N L+ L + I
Sbjct: 90 NGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQ 149
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIY--SSVMYNLVID 120
A + +V G ++ ++ + LC+ G+ L LL D + ++VMYN++ID
Sbjct: 150 ALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID 209
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K AFD ++M R + P TY++++ G K + + M ++ +
Sbjct: 210 NMCKAKLVNDAFDLYSQMVAKR-ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN 268
Query: 181 PKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P N Y L D GK A+++ + I+ T ++ +V
Sbjct: 269 P------NVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A I+ ++ G+ Y VN CK +E L ++ R IP + S
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C G+ +L+ + D+G + SS+++ C N +DKAIAL ++
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
D+ TY +L+ GL + GR+E+A +F D + + + ++ +++ C KA+
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502
Query: 416 NHDEMLKMGHKPDEATYKQVI 436
+M G P+ TY+ VI
Sbjct: 503 LLSKMEDNGCIPNAKTYELVI 523
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 176/396 (44%), Gaps = 51/396 (12%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ +G+ Q +A+ ++++D L D ++Y M P V NAL+
Sbjct: 188 LLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFS 247
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLL--DSGIYSSV 113
+++ A L+ M ++ ++PN +T++++ C+ GK +VVL ++ D V
Sbjct: 248 AVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVV 307
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++D Y A D + M +G + Y+++++G + K ++ D + L
Sbjct: 308 TYNSLMDGYCSINKVNKAKDIFDSMASG-GVIANVQIYTTMVNG---FCKIKMVDEAINL 363
Query: 174 MVE---KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
E +K++P V+ TY++ ++ L
Sbjct: 364 FEEMRCRKIIPN--------VV--------TYSS---------------------LIDGL 386
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K GR+ A+++ + +RG Y + ++ LCK H ++ LL ++ ++G P
Sbjct: 387 CKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDM 446
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + C G+ ++ + + +L KG LD + + +++ +C DKA+AL K
Sbjct: 447 YTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSK 506
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+E + TY++++ LF+ + A ++ M
Sbjct: 507 MEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ + +L KG + ++L++ C I +A+ H K+ LD +Y L++GL
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGL 176
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSS--FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K GR+ A+++ + + K+V ++ + +++ +C K + A + +M+ PD
Sbjct: 177 CKVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235
Query: 429 EATYKQVISGF 439
TY +ISGF
Sbjct: 236 VFTYNALISGF 246
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 171/378 (45%), Gaps = 27/378 (7%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ T++ + L +G + + + D+ V YN++I Y
Sbjct: 195 WQAMRLAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYC 254
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK----------TEVSDRIVGL 173
+ G RL ++ L P TY +++ R Y + E+ +R +G
Sbjct: 255 RAGRTQDGMSRLADLREQAELAPDKVTYLTLMQ--RHYSEGTFPQCIALFQEMEERGMG- 311
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
K +P+H VI LS GK + A +F+R ++ ++ K
Sbjct: 312 ----KEIPQH---AYVLVIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKL 364
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
GR KEA+ ++ + GI + Y VN LC+ EE R VE+G A+
Sbjct: 365 GREKEAMALFERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFY 424
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + G + +EL ++ KG + DS+C + L++ + D A A + ++E
Sbjct: 425 TSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMED 484
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRK 412
V TY +L+DGLFK+ + EEA++ +D M + + ++++F ++ + LC + +
Sbjct: 485 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLANGLCLSGKFSR 544
Query: 413 AMKNHDEMLKMGHKPDEA 430
A + DE+ MG P+ A
Sbjct: 545 AWRILDELAPMGVIPETA 562
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 122/314 (38%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G++ A LV+ S G + L V+ M G + AL+D++ + + A
Sbjct: 311 GKEIPQHAYVLVIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREKEA 370
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M G+ + T+ ++ LCR G E L S + V N +
Sbjct: 371 MALFERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIF------- 423
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
Y+S++DG + + + + M+ K +P +
Sbjct: 424 ------------------------YTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYC- 458
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L G+T A ++R D+ + T ++ L KE + +EA++ + +
Sbjct: 459 -YNVLIDALVKAGRTDIACAFYERMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSM 517
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + N LC + +L ++ G IP + C G++
Sbjct: 518 IDKGITPTAAAFRVLANGLCLSGKFSRAWRILDELAPMGVIPETAH-EDMINVLCKTGRF 576
Query: 307 KEVEELLSAVLDKG 320
K+ +L ++ KG
Sbjct: 577 KQACKLADGIVQKG 590
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 98/229 (42%), Gaps = 5/229 (2%)
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEV 274
+E T C+L L G + AI ++ +S D Y + C+ + ++
Sbjct: 203 VEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRTQDG 262
Query: 275 CGLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL--LLDSFCCSSL 331
L D+ E+ + P + + +G + + L + ++G+ + +
Sbjct: 263 MSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMGKEIPQHAYVLV 322
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ + + +A+A+ ++ K + A Y L+D + K GR +EA+ +F+ MK +
Sbjct: 323 IGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREKEAMALFERMKASGI 382
Query: 392 -VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++V+ LC + +A+ ++ G + Y +I GF
Sbjct: 383 ELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGF 431
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 198/465 (42%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + + G +P+V A N +L L ++ + A ++ M RD V PN
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PN 403
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LCR GK L + D +G++ +V+ N++ID K A
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463
Query: 137 EMCNGRNLTPGFSTYSSILDGARR----------YEKTEVSDRIVGLMVEKKLLPKHFLS 186
M + + TP T+SS++DG + YEK + G +V L+ F
Sbjct: 464 GM-DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 522
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
G + D K Y EM+ C + L + C+ KA
Sbjct: 523 G------RKEDGHKIYK-EMV-HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 574
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G E ++++ + E+G + Y A ++ CK + +
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ +G+ P + + + E L G+ L+ SSL++ +
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 694
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ + + +V T++ LLD L K + EA+ F MK+LK +
Sbjct: 695 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 754
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+++ LC +++ KA EM K+G KP+ TY +ISG
Sbjct: 755 ITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 799
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 185/439 (42%), Gaps = 15/439 (3%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + ++ LV +C + L + ++ + MR + F PA SA L+ AL E L
Sbjct: 159 SSNISIELVANCVKSRKL-REAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLIL 217
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSK 124
+ M G N ++ + ++ R G+ + L LLD +S V+YN+ ID + K
Sbjct: 218 FHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGK 277
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G ++ +EM L P TY+S++ + + + + + + + + +P +
Sbjct: 278 AGKVDMSWKFFHEM-KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY 336
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I GK A + +R + C+L L K+ RV+EA++I+
Sbjct: 337 --AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE 394
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +R Y +++LC+E + + D+ G P + ++ + C
Sbjct: 395 EM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 453
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K +E + + DK ++ SSL++ ++D A +L+ K+ Y
Sbjct: 454 KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 513
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL-CHLK--ELRKAMKNHDEML 421
L+ FK GR E+ +I+ M + S ++ + + C K E K E+
Sbjct: 514 SLIRSFFKCGRKEDGHKIYKEM--VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571
Query: 422 KMGHKPDEATYKQVISGFM 440
G PD +Y +I G +
Sbjct: 572 AHGFIPDARSYSILIHGLV 590
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 157/369 (42%), Gaps = 18/369 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y+ M G P ++ N +D +++ E L+ + G P+ ++S++
Sbjct: 527 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 586
Query: 90 QILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L ++G +E+ + + G + + YN VID + K G A+ L EM +
Sbjct: 587 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM-KVKGH 645
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGK 200
P TY S++DG + ++ D L E K + + N V L D +G+
Sbjct: 646 PPTVVTYGSVIDGLAKIDRL---DEAYMLFEEAK---SNGIKLNVVVYSSLIDGFGKVGR 699
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +I + + + T C+L AL K + EA+ + + + Y
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N LC+ + + +++ + G P + + ++ G E L S G
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEA 379
+ DS ++++E S + A AL + +LKG ++ T VLLD L K +E+A
Sbjct: 820 GIPDSASYNAMIEGLSSANKAMDAYAL-FEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878
Query: 380 VRIFDYMKE 388
+ +KE
Sbjct: 879 AIVGAVLKE 887
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGD 127
M PN T++++ LCR GK E G +L G+ ++ +N +I+ Y K+G
Sbjct: 326 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 385
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+AF L+ M G N P TY+ +++G R K+ + ++ +V+ LLP
Sbjct: 386 VVSAFQLLSVMEKG-NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY- 443
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ G+ A IF +E T ++ L K GR+++A I +
Sbjct: 444 -NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 502
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
++GI++ + + A ++ CK + ++VC L ++VE + A + F+ + K
Sbjct: 503 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 562
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +L ++ GL+ + L+E +C + ++ + ++++ S +V TY +++
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK--ELRKAMKNHDEMLKMGH 425
+GL +GR+EEA I M VS + F V H+K L +A + M+K G
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFG-VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 681
Query: 426 KPDEATYKQVISGFM 440
+P+ Y ++SGF+
Sbjct: 682 QPNSHIYSALLSGFV 696
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 180/446 (40%), Gaps = 63/446 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+IQ CE DS++ + L+ +DG M GF + + LL L +
Sbjct: 129 LIQECE--DSENGVVKLMGA--------LDG------MTELGFRLSYPCYSTLLMCLAKL 172
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV------LGLLDSGIYSSVM 114
N +A +Y MV +G + V LC++G + + L G+ + V
Sbjct: 173 NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVC 232
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
+LV+ ++ D G AF +M N P TYS ++ G + E + ++ M
Sbjct: 233 TSLVLA-NCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM 291
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VEK P +TY ++ K CD G
Sbjct: 292 VEKGCQPS----------------TRTYT--VLIKAKCD-------------------IG 314
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+A+++ ++ + Y ++ LC+E + EE G+ R +++ G P + +
Sbjct: 315 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 374
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSF-CCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ C +G +LLS V++KG + + LME C + KA L ++
Sbjct: 375 ALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 433
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
D TY++L+DG K+G++ A IF+ M + +F ++ LC L L +
Sbjct: 434 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 493
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISG 438
A M+K G DE T+ +I G
Sbjct: 494 ANGILGSMVKKGISLDEVTFTALIDG 519
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 170/416 (40%), Gaps = 36/416 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + +G ++ M G P AL+D L + + A+ + G+MV+
Sbjct: 444 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 503
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G+S ++ T++ + C+ GK + V L ++ + + + +N +D K
Sbjct: 504 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 563
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M L P T++ +++G R +T +S +++ M + P +
Sbjct: 564 ANAMLGKMMK-YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY--TI 620
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ AE I + T ++KA K GR+ A QI + + G
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680
Query: 251 ITVRDSDYYAFVNVLCKEHQP--------------------EEVCGLLRDVVERGYIPCA 290
Y A ++ + E L + +++ +P
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTE 740
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ V C +G+ E ++L ++ GL D SS++E+YC + D +
Sbjct: 741 DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKL 799
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEA-------VRIFDYMKELKVVSSSSFVI 399
+ K A+Y ++ GL +GR++EA VR +E++V S F++
Sbjct: 800 VLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLM 855
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 209/449 (46%), Gaps = 27/449 (6%)
Query: 13 DALSLVLDCYSHKGLFMDG--------------LEVYRMMRVYGFVP-AVSACNALLDAL 57
DAL V D KGL ++G + +R M G V V + ++D L
Sbjct: 134 DALK-VFDYVMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVL 192
Query: 58 YRQNEIRLASCLYGAMVRDGVSPNKFTW-SLVAQILCRSGKFEV--VLGLLD-SGIYSS- 112
R+ E+ A L M GV P FT+ +L+ + R + V +LGL++ G+ +S
Sbjct: 193 CRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASL 252
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
V Y ++I++Y+ G A EMC RN+ Y+S++ R + +
Sbjct: 253 VTYTILIEWYASSERIGEAEKVYEEMCE-RNVEMDVYVYTSMISWNCRAGNVRRASALFD 311
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M+ + ++P G +I + G+ AAE++ + + ++L M+ K
Sbjct: 312 EMICRGIVPNTXTFG--ALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCK 369
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G + EA ++ ++ +G Y + LCK H+ EE +L +VE+G P +
Sbjct: 370 RGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVT 429
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ F+ C +G E E L + +G++ + ++L++ Y N ++ +A L ++
Sbjct: 430 CATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMV 489
Query: 353 KLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKEL 410
+ KG L DV TY L+ G +++EA+++F+ M + + ++ ++S L
Sbjct: 490 E-KGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRA 548
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A+K +DEM++MG PD+ ++ ++
Sbjct: 549 DEALKLYDEMMRMGLIPDDRVFEALVGSL 577
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 195/441 (44%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + S +++ +G + LE+ M G P + N L++ L + A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
L MV G PN T+ V ++C+SG+ + + LL + I +V Y+++ID
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G AF+ NEM + +T TY+ ++ G + + +++ M+++K+ P
Sbjct: 273 LCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I GK AE + K I T ++ KE + +A Q
Sbjct: 332 N--VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ L+ +G + +N CK ++ ++ L R + RG + + + + C
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK +EL ++ + + + L++ C N + +KA+ + KIEK K LD+
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDE 419
Y++++ G+ ++++A +F + LK V ++ I++ LC L +A +
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M + GH PD TY +I +
Sbjct: 569 MEEDGHAPDGWTYNILIRAHL 589
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 180/410 (43%), Gaps = 36/410 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + + M + G + + +++ R ++ LA G +++ G PN T+S +
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
LC G+ L L+ DR+ EM + P T
Sbjct: 168 LCLEGRVSEALELV---------------------------DRMVEMGH----KPDLITI 196
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++++G K + ++ MVE P G V+ + G+T A + ++
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP--VLNVMCKSGQTALAMELLRKM 254
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ I+L ++ L K G + A +++ + +GIT Y + C +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LLRD+++R P + S + S +GK +E EEL ++ +G+ D+ +SL
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
++ +C +DKA + + + KG ++ T+++L++G K R+++ + +F M
Sbjct: 375 IDGFCKENHLDKANQM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV+ + ++ ++ C L +L A + EM+ P+ TYK ++ G
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 176/419 (42%), Gaps = 50/419 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++++R M +P V + L A+ + + L L M G++ N +T S++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 90 QILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAF---DRLNEMCNG 141
CR K + + I +++ ++ +I+ +G A DR+ EM +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH- 189
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P T +++++G K + ++ MVE P G V+ + G+T
Sbjct: 190 ---KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP--VLNVMCKSGQT 244
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A + ++ + I+L ++ L K G + A +++ + +GIT Y
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ C + ++ LLRD+++R P + S + S +GK +E EEL ++ +G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAV 380
D+ +SL++ +C +DKA + + + KG ++ T+++L++G K R+++ +
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 381 RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F M VV+ D TY +I GF
Sbjct: 424 ELFRKMSLRGVVA----------------------------------DTVTYNTLIQGF 448
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 167/400 (41%), Gaps = 40/400 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL+ G +E+ R M + ++D L + + A L+ M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
++ N T++++ C +G+++ LL I + N+V ID + K+G A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--------------- 177
+ EM + R + P TY+S++DG + + ++++V LMV K
Sbjct: 354 ELHKEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 178 -----------KLLPKHFLSG-------NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+L K L G + +IQ ++GK A+ +F+ K+
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L G ++A++I+ I + + + Y ++ +C + ++ L
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ +G P + + C KG E E L + + G D + + L+ + +
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
K++ L ++++ S+D +T +++D + DGR++++
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKS 631
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ S+R ++ R+ V++ + ++ L RD++ +P ++ SR ++
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAK 100
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
++ V L + KG+ + + S ++ +C R++ A + KI KL + T
Sbjct: 101 TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
+ L++GL +GR+ EA+ + D M E+ + +V+ LC + +AM D+M+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 422 KMGHKPDEATYKQVIS 437
+ G +P+ TY V++
Sbjct: 221 EYGCQPNAVTYGPVLN 236
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGD 127
M PN T++++ LCR GK E G +L G+ ++ +N +I+ Y K+G
Sbjct: 303 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 362
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+AF L+ M G N P TY+ +++G R K+ + ++ +V+ LLP
Sbjct: 363 VVSAFQLLSVMEKG-NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY- 420
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ G+ A IF +E T ++ L K GR+++A I +
Sbjct: 421 -NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 479
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
++GI++ + + A ++ CK + ++VC L ++VE + A + F+ + K
Sbjct: 480 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +L ++ GL+ + L+E +C + ++ + ++++ S +V TY +++
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 599
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK--ELRKAMKNHDEMLKMGH 425
+GL +GR+EEA I M VS + F V H+K L +A + M+K G
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFG-VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 658
Query: 426 KPDEATYKQVISGFM 440
+P+ Y ++SGF+
Sbjct: 659 QPNSHIYSALLSGFV 673
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 195/461 (42%), Gaps = 53/461 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G + V+R M +G P + NAL++ ++ + A L M +
Sbjct: 316 TILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEK 375
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
PN T++ + + LCR K F ++ ++D+G+ V YN+++D + K+G
Sbjct: 376 GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM 435
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF+ N M N L P T+++++DG + + E ++ I+G MV+K + S ++
Sbjct: 436 AFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI------SLDEV 488
Query: 191 VIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L D +GK +F+ + + T C L AL K+ ++ EA + +
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ G+ + + C+ + +L + + G P + + C G+
Sbjct: 549 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 608
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+E E +L ++ G+ + F + L++ + ++D+A + + K + Y L
Sbjct: 609 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 668
Query: 367 LDG-------------------------------------LFKDGRMEEAVRIFDYMKEL 389
L G +F+ ++ A++I D +K+
Sbjct: 669 LSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKC 728
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
V + + +V LC + +A + +M+K G PD+A
Sbjct: 729 GVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 769
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 180/446 (40%), Gaps = 63/446 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+IQ CE DS++ + L+ +DG M GF + + LL L +
Sbjct: 106 LIQECE--DSENGVVKLMGA--------LDG------MTELGFRLSYPCYSTLLMCLAKL 149
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV------LGLLDSGIYSSVM 114
N +A +Y MV +G + V LC++G + + L G+ + V
Sbjct: 150 NMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVC 209
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
+LV+ ++ D G AF +M N P TYS ++ G + E + ++ M
Sbjct: 210 TSLVLA-NCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM 268
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VEK P +TY ++ K CD G
Sbjct: 269 VEKGCQPS----------------TRTYT--VLIKAKCD-------------------IG 291
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+A+++ ++ + Y ++ LC+E + EE G+ R +++ G P + +
Sbjct: 292 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 351
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSF-CCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ C +G +LLS V++KG + + LME C + KA L ++
Sbjct: 352 ALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 410
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
D TY++L+DG K+G++ A IF+ M + +F ++ LC L L +
Sbjct: 411 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 470
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISG 438
A M+K G DE T+ +I G
Sbjct: 471 ANGILGSMVKKGISLDEVTFTALIDG 496
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 171/432 (39%), Gaps = 52/432 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + +G ++ M G P AL+D L + + A+ + G+MV+
Sbjct: 421 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 480
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G+S ++ T++ + C+ GK + V L ++ + + + +N +D K
Sbjct: 481 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 540
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M L P T++ +++G R +T +S +++ M + P +
Sbjct: 541 ANAMLGKMMK-YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY--TI 597
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ AE I + T ++KA K GR+ A QI + + G
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGL--------------------------------- 277
Y A ++ + L
Sbjct: 658 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 717
Query: 278 ---LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+RD +++ +P + V C +G+ E ++L ++ GL D SS++E+
Sbjct: 718 ALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEH 776
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-------VRIFDYMK 387
YC + D + + K A+Y ++ GL +GR++EA VR +
Sbjct: 777 YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEE 836
Query: 388 ELKVVSSSSFVI 399
E++V S F++
Sbjct: 837 EVEVTPSIEFLM 848
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 192/442 (43%), Gaps = 46/442 (10%)
Query: 6 EGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+G D D +S V++ + +G Y M G +P V N+++ AL + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLV 118
A + +MV++GV PN T++ + C SG+ + +G L G+ V+ YN +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+D+ K G A + M R L P +TY ++L G ++ LMV
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P H+ +F ++ A +K+G+V +
Sbjct: 370 IHPNHY----------------------VFS---------------ILICAYAKQGKVDQ 392
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ ++ + ++G+ Y + +LCK + E+ +++ P + + +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
S C KW + +EL+ +LD+G+ LD+ +S+++ +C ++ ++ L + ++
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
++ TY L+DG G+M+EA ++ M + + ++ +++ C + + A+
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G PD TY ++ G
Sbjct: 573 REMESSGVSPDIITYNIILQGL 594
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 168/422 (39%), Gaps = 46/422 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G + +++ M G P ++ LL + + L MVR+G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
+ PN + +S++ + GK + V + G+ +V Y VI K G A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M + R L+PG Y+S++ ++K
Sbjct: 430 RYFEQMIDER-LSPGNIVYNSLIHSLCIFDKW---------------------------- 460
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D K EM+ + C + I ++ + KEGRV E+ +++ L+ G+
Sbjct: 461 ----DKAKELILEMLDRGICLDTIFFNS-----IIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C + +E LL +V G P + + + C + ++ L
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ G+ D + +++ R+ A L++ I + L+++TY+++L GL K
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 373 DGRMEEAVRIFDY--MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ +EA+R+F + +L+ + + +F I++ L + +A + G PD
Sbjct: 632 NNLTDEALRMFQNLCLTDLQ-LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 431 TY 432
TY
Sbjct: 691 TY 692
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C GR L GF+ +++ R + + + GL +K+ D V+++++ +
Sbjct: 103 CAGR-LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS-----DAMDIVLRRMTQL 156
Query: 199 G---KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G ++ ++ K CDE R +EA+++ ++ + G
Sbjct: 157 GCIPNVFSYNILLKGLCDEN-------------------RSQEALELLQMMPDDGGDCPP 197
Query: 256 S--DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N KE ++ G ++++RG +P + + +A+ C + E+L
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVL 257
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++++ G++ + +S++ YCS+ Q +AI K+ DV TY+ L+D L K+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
GR EA ++FD M K G KP+ TY
Sbjct: 318 GRCTEARKMFD----------------------------------SMTKRGLKPEITTYG 343
Query: 434 QVISGF 439
++ G+
Sbjct: 344 TLLQGY 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 138/315 (43%), Gaps = 8/315 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+ +G + V+ MR G P ++ L + + A + M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+ +SP ++ + LC K+ E++L +LD GI ++ +N +ID + K+G
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ ++L ++ + P TYS+++DG K + + +++ MV + P +
Sbjct: 497 ES-EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY--N 553
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + + A ++F+ + T +L+ L + R A ++Y I+E
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + S Y ++ LCK + +E + +++ + + + G+ E
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 310 EELLSAVLDKGLLLD 324
++L +A+ GL+ D
Sbjct: 674 KDLFAALSANGLVPD 688
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV PN T+S + C +GK + LL S +
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V YN +I+ Y K A EM ++P TY+ IL G + +T
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + VG+ L LS + ++ L T A +F+ C ++L+ T
Sbjct: 602 AAKELYVGITESGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
M+ AL K GR EA ++ +S G+ V D Y+ +
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGL-VPDVRTYSLM 695
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI-KIEKL 354
+ S C G+ L V+ KG +D+ + L++ C++++ A+ + + ++ +L
Sbjct: 97 LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LKVVSSSSFVIVVSRLCHLK 408
+V +Y++LL GL + R +EA+ + M + VV S+ V++
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEG 213
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L KA + EML G P+ TY +I+
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYNSIIAAL 244
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 191/428 (44%), Gaps = 18/428 (4%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
+ +G+ E+ R MR +G +P+ + N ++ L + A L+ M G+ P+
Sbjct: 328 TEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDA 386
Query: 83 FTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNE 137
FT++++ LC+ K L L + +G+ V Y+ ++ Y G A E
Sbjct: 387 FTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTE 446
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQ 193
M G+ TP TY++++ G + D+ L+ E K ++ +S NDY +I
Sbjct: 447 M-PGKGFTPNVVTYTTLMKG---HINKAAFDKAYALLAEMK---QNGVSCNDYTYNTLIN 499
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
L +G+ + KR E T ++ K G + A +Y + +GI
Sbjct: 500 GLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP 559
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +F++ CK + +L DV +G P + + C +G ++L
Sbjct: 560 NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL 619
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+L GLL + +S + Y + + +++A+ + K+ K LD ATY L+DG KD
Sbjct: 620 VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKD 679
Query: 374 GRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G + A++++ M + + +F + LC ++ A K DEM ++ +P+ Y
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739
Query: 433 KQVISGFM 440
+I+G++
Sbjct: 740 NMLINGYL 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 152/360 (42%), Gaps = 15/360 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL+L CY G + +++Y M GF P V L+ + A L M +
Sbjct: 426 SLLL-CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
+GVS N +T++ + LC G+ V +L + + +++ YN +I+ + K G G+
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE---KKLLPKHFLSG 187
AF +MC + + P TY+S +DG Y KT D + ++ + K L P ++
Sbjct: 545 AFAVYQQMC-AKGIPPNIVTYTSFIDG---YCKTSCCDLALKMLNDVRCKGLRPD--IAA 598
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I G A + + + + ++EA++ Y +
Sbjct: 599 YNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMI 658
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ GI + + Y ++ K+ L ++V +G IP + + C G
Sbjct: 659 KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDID 718
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ +LL + + + + L+ Y N ++ +A LH ++ + K D TYD+L+
Sbjct: 719 DARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V++A+ I+ G+ D Y + +E PE+ L R + + G +P E +
Sbjct: 298 VRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNM 357
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ WK+ L + D G + D+F + L+ + C R+I +A+ L K+ +
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
+ TY LL +G M+EAV+++ M + ++ ++ + KA
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
EM + G ++ TY +I+G
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGL 501
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 8/215 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++A KEG +A++++ + I + LCK +LR + + G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
++P + V G+ +E + +L G + ++LM YC R++ K
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRK-- 300
Query: 346 ALHIKIEKLKGSL---DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVV 401
AL I E L+ L DV TY VL+ G ++G E+A + M++ ++ S++ F +V+
Sbjct: 301 ALDIFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
L + K + A+ EM G PD TY +I
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILI 393
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 98/230 (42%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F +IE C + +L K A+ + + + G D + + V+VL
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + EE + +++ G + + + C + + ++ ++ L GL+
Sbjct: 259 KGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV 318
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L+ +KA L ++ +++++ GL D ++AV +F M
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + + ++ I++ LC +++R+A+ ++M + G KP TY ++
Sbjct: 379 ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D CS + C R ++A+ + K++ T++ ++D L K GRMEEA+ I
Sbjct: 211 DQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIK 270
Query: 384 DYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
D EL V++ + L H +E+RKA+ +E L+ G P + TY +I G
Sbjct: 271 D---ELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRG 326
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMK 415
LD +DV++ FK+G ++AVR+FD M ++ + ++ LC L++ +A+
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233
Query: 416 NHDEMLKMGHKPDEATYKQVI 436
+M G P + T+ V+
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVV 254
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D + + ++D +S G L++Y M G +P AL L R +I
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM 114
A L M R + PN ++++ R+GK + L D + +M
Sbjct: 720 ARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIM 768
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 204/465 (43%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F D + R G +P+V + N +L L R+ ++ A + M +D + PN
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PN 408
Query: 82 KFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC++GK E L + D+G++ +V+ N+++D K RL+
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA-------QRLD 461
Query: 137 EMC------NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF----LS 186
+ C + + P TY S+++G R+ + + + ++ M++ +P L
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
N + + D K Y EM+ + C + L + C+ KA
Sbjct: 522 RNFFKCGRKEDGHKIYN-EML-RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G EA ++++ + E+G + Y ++ CK + +
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ +G+ P + + + E L KG+ L+ SSL++ +
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ + + +V T++ LLD L K + EA+ F MK+LK +
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNY 759
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC +++ KA EM K G KP+ TY +ISG
Sbjct: 760 ITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGL 804
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 196/505 (38%), Gaps = 79/505 (15%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + + +VL + L + + MR F PA SA L+ AL + L
Sbjct: 164 SNNTCIEIVLSFIKSRKL-REAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSK 124
+ M G + N ++ + ++ R G+ + L LLD +S V+YN+ ID + K
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A+ +EM L TY+S++ + ++ + + M + K +P +
Sbjct: 283 AGKVDMAWKXFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I GK A + +R + + C+L L ++G+V EA++ +
Sbjct: 342 --AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 245 LIS-----------------------ERGITVRDS--DYYAFVNV---------LCKEHQ 270
+ E + VRD+ D F NV LCK +
Sbjct: 400 EMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ C + + + P A+ + G+ E +L +LD + ++ +S
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 331 LMEYY--CSNR---------------------------------QIDKAIALHIKIEKLK 355
L+ + C + +I+K AL +I+ L
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFVIVVSRLCHLKELRKAM 414
D +Y +L+ GL K G EA +F MKE V+ + ++ V+ C ++ KA
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ +EM GH+P TY VI G
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGL 664
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 158/365 (43%), Gaps = 10/365 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y M G P + N +D +++ EI L+ + G P+ +++++
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591
Query: 90 QILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L ++G +E+ + + G + + YN VID + K G A+ L EM +
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTKGH 650
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY S++DG + ++ + + + K + + + +I +G+ A
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS--LIDGFGKVGRIDEA 708
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+I + + + T C+L AL K + EA+ + + + T Y ++
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + + +++ ++G+ P + ++ G E + L +KG + D
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF 383
S ++++E + + A L + +LKG S+ T VLLD L K +E+A +
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRL-FEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVG 887
Query: 384 DYMKE 388
++E
Sbjct: 888 AVLRE 892
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 105/276 (38%), Gaps = 37/276 (13%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ A + V+D + G ++ M+ G P V +++D L + + + A L+
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAA 131
G+ N V+Y+ +ID + K G A
Sbjct: 679 EAKSKGIELN------------------------------VVIYSSLIDGFGKVGRIDEA 708
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL--MVEKKLLPKHFLSGND 189
+ + E+ + LTP T++ +LD + E E+S+ +V M + K P +
Sbjct: 709 YLIMEELMQ-KGLTPNVYTWNCLLDALVKAE--EISEALVCFQSMKDLKCTPNYITYS-- 763
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L + K A + ++ + + T M+ L+K G + EA ++ E+
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
G + Y A + L ++ + L + +G
Sbjct: 824 GGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 205/438 (46%), Gaps = 23/438 (5%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ + G D +E++R M G P V N ++ L + + A M
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFG 129
++ V P+ T+ ++ L + +F+ ++ + D G ++V+YN +ID Y + G+
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A ++M + ++P T +S++ G + + E ++ ++E+ L ++
Sbjct: 320 TALQIRDDMIS-NGISPNSVTCNSLIQGYCKSNQMEHAEH----LLEEMLTGGGVINQGT 374
Query: 190 Y--VIQKLS-----DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ VI +L D + EM+ + + D ++ L + G+ EAI++
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLR-----NFKPNDGLLTLLVSGLCQNGKQSEAIEL 429
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
++ + E+G A ++ LC+ EE LL++++ERG + ++ + + + C
Sbjct: 430 WYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCK 489
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+GK +E +L ++ +G+ D + + L+ C+ +I++A L + +K D T
Sbjct: 490 EGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYT 549
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y +++DG K R+EE ++F M +K+ ++ + ++ C +R+A + D+M
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609
Query: 422 KMGHKPDEATYKQVISGF 439
G ATY +I G
Sbjct: 610 SRGIPQTSATYSSLIHGL 627
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 188/414 (45%), Gaps = 9/414 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
E++ ++ G P++ CN LL +L + NE++++ ++ M GV+P+ + +S +
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206
Query: 92 LCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C G+ + + L G+ +V+ YN +I K G AF + E + P
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAF-QFKEKMEKERVKP 265
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY +++G + E+ + ++ I+ M ++ P + + + +I +G A
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVY--NTLIDGYCRIGNISTALQ 323
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
I I TC +++ K +++ A + + G + + + ++ LC
Sbjct: 324 IRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLC 383
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ + + + +++ R + P L+ V+ C GK E EL +L+KG ++
Sbjct: 384 LKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTV 443
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L+ C ++A L ++ + LD +Y+ L+ K+G++EE ++ + M
Sbjct: 444 TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +++ LC++ ++ +A E K G+ PD TY +I G+
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 181/452 (40%), Gaps = 54/452 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ + M G+ P N L+D R I A + M+ +G+SPN T + + Q C
Sbjct: 289 ILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYC 348
Query: 94 RSGKFEVVL----------GLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+S + E G+++ G ++SV++ L + K F +A + EM RN
Sbjct: 349 KSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL-----KCRFDSALLFIMEML-LRN 402
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P + ++ G + K + + ++EK S + +I L + G
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS--NALIHGLCEAGSKEE 460
Query: 204 AEMIFKR------------------AC------DEKIELQDD-----------TCGCMLK 228
A + K AC +E +L+++ T +L
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L G+++EA ++H + G Y ++ CK ++ EE L +++V
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
A+ + + C G +E L + +G+ S SSL+ + +D A L
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL 407
++ K S +V Y L+ G K G+M + I M V + ++ I+++ C L
Sbjct: 641 DEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKL 700
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A K +EM + G PD TY + +GF
Sbjct: 701 GNMKAAAKLLNEMAQKGIVPDAVTYNALTNGF 732
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 147/354 (41%), Gaps = 8/354 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + F P L+ L + + A L+ ++ G + N T + + LC +G
Sbjct: 398 MLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGS 457
Query: 98 FE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E ++ +L+ G + S+ YN +I K+G F EM R + P TY+
Sbjct: 458 KEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR-RGIQPDMYTYN 516
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L G K E + + + P + G +I + E +F+
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG--IMIDGYCKANRVEEGEKLFQEMV 574
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
KIE G +++A + G ++EA ++ + RGI + Y + ++ L +
Sbjct: 575 TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVD 634
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL ++ + G P + + + C G+ +V+ +L + + + + ++
Sbjct: 635 SANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMI 694
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+C + A L ++ + D TY+ L +G K+G+MEEA+++ D M
Sbjct: 695 NGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLM 748
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 180/464 (38%), Gaps = 46/464 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y G L++ M G P CN+L+ + N++ A L M+ G
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367
Query: 78 -----------------------------------VSPNKFTWSLVAQILCRSGK----F 98
PN +L+ LC++GK
Sbjct: 368 GVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAI 427
Query: 99 EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E+ LL+ G + +V N +I + G A L EM R L +Y++++
Sbjct: 428 ELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE-RGLVLDSISYNTLILA 486
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K E ++ MV + + P + + ++ L +MGK A ++ C +
Sbjct: 487 CCKEGKVEEGFKLKEEMVRRGIQPDMYTY--NMLLHGLCNMGKIEEAGGLWHE-CKKNGN 543
Query: 218 LQDD-TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
D T G M+ K RV+E +++ + I Y + C+ E
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L D+ RG + S + G +LL + +GL + C ++L+ YC
Sbjct: 604 LRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
Q+ K ++ ++ + TY ++++G K G M+ A ++ + M + +V +
Sbjct: 664 KLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + + C ++ +A+K D M G D+ TY +I G+
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 33/322 (10%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N L+ A ++ ++ L MVR G+ P+ +T++++ LC GK E GL
Sbjct: 481 NTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHE--- 537
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
K G+F A+ TY ++DG + + E +++
Sbjct: 538 -----------CKKNGNFPDAY-----------------TYGIMIDGYCKANRVEEGEKL 569
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
MV K+ + G +I+ + G A + I T ++ L
Sbjct: 570 FQEMVTMKIEQNAVVYGT--LIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S G V A Q+ + + G++ Y A + CK Q +V +L+++ P
Sbjct: 628 SNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNK 687
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + + C G K +LL+ + KG++ D+ ++L +C ++++A+ +
Sbjct: 688 ITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDL 747
Query: 351 IEKLKGSLDVATYDVLLDGLFK 372
+ SLD TY L+DG K
Sbjct: 748 MSTGGISLDDITYTTLIDGWHK 769
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Query: 225 CMLKALSKEGRVKEAIQIYHLISER------GITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
C L S + A +H SE +TV D + + K V L
Sbjct: 92 CFLAIGSNNVNPRTAFNFFHFASETLFEPAVAVTVVDLLIHVYSTQF-KHLGFGVVFELF 150
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ +G P + ++S + K ++ + G+ D + S+++ +C+
Sbjct: 151 SLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTG 210
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSF 397
++D AI L K+EK+ + +V TY+ ++ GL K+GR++EA + + M++ +V S ++
Sbjct: 211 GRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY 270
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++++ L L+ +A EM G+ P+ Y +I G+
Sbjct: 271 GVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGY 312
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 186/417 (44%), Gaps = 13/417 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++R+M GF P +L+ + ++ A L+ MV G P+ T +++ L
Sbjct: 316 ELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGL 375
Query: 93 CRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+SG FE ++ G +V+ Y +I SK G AF + M P
Sbjct: 376 CKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI-AHGCFPD 434
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA-EM 206
TY +LDG + + + + +++ + + P L + ++ L D G +
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS--LVNGLCDGGSVEKTLDD 492
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F+++ L C ++ L K GR+ EA +I+ + G + Y +N LC
Sbjct: 493 LFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552
Query: 267 K--EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ E++ E LL D+ + GY+P A+ + C G+ ++L +G D
Sbjct: 553 RSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNAD 612
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L C Q+D+A++L ++ + G+ D A Y +++GL K ++E+A + FD
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFD 672
Query: 385 YM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA-TYKQVISGF 439
M + + + +++ +V LCH + +A + ML G Y +I GF
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGF 729
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 194/502 (38%), Gaps = 81/502 (16%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACN-ALLDALYRQNEIRLASCLYGAMVR 75
+++DC G+ EV+ M GFVP A + A++ L + ++ A ++G M +
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ ++ + L ++G + L +LD + + + V Y ++++ K G
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---KHFL-- 185
A + L + P Y+S++ G + + + + + MVE P H +
Sbjct: 314 A-EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372
Query: 186 -----SGN-----------------------DYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
SGN +IQ LS +G+ A I K
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCF 432
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN-------------- 263
T C+L K GR+ EA Q+ + + + Y + VN
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDD 492
Query: 264 ----------------------VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
LCK + +E C + + +V G P A + + C
Sbjct: 493 LFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552
Query: 302 GKGKWKEVEELLSAVLD---KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ + VE + + D G L D+ + L C ++D+A+ + + +
Sbjct: 553 -RSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNA 611
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNH 417
DV Y L GL G+++ AV +F M ++ ++++ +++ L +K+L A K
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFF 671
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
DEM+ G KP ATY ++
Sbjct: 672 DEMIGKGQKPTVATYTALVQAL 693
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/440 (19%), Positives = 182/440 (41%), Gaps = 44/440 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF V N L++ L + ++ M++ G++PN F+++++ + R+ + +
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 102 LGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ + +L ++D K G AF+ +EM + P + +++++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ ++ + + + G M EK P ++ N +I L+ G A + +
Sbjct: 234 TLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNT-MIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T G ++ +L K G ++ A +++ +++ G Y + ++ K + +E C
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKW----KEVEEL-------------------- 312
L ++VE GY P + + + C G + K EE+
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411
Query: 313 -----------LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ ++ G DS L++ +C ++D+A L +++K S ++
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471
Query: 362 TYDVLLDGLFKDGRMEEAV-RIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
Y L++GL G +E+ + +F+ K + + ++ LC L +A +
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQR 531
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G KPD TY +I+G
Sbjct: 532 MVSEGCKPDATTYNILINGL 551
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 50/305 (16%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDAL--YRQNEIRLASCLYGAMVRDGVSPNKF 83
G + +++ M G P + N L++ L R+N + A L + + G P+
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAV 579
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSK-------KGDFGAAFDRLN 136
T++ + LC+ G+ + + +L+ SS +N + Y+ +G A
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEA--SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + P + Y I++G + +K E + + M+ K P
Sbjct: 638 EMVR-QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV------------- 683
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
TY A +++AL G V EA + + RG V
Sbjct: 684 ---ATYTA---------------------LVQALCHAGNVDEAFHRFESMLARGELVGSV 719
Query: 257 DYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y A ++ CK + + L D++ RG +P A+ + GK ++ +ELL
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 316 VLDKG 320
+ G
Sbjct: 780 MAAGG 784
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 204/465 (43%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F D + R G +P+V + N +L L R+ ++ A + M +D + PN
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PN 408
Query: 82 KFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC++GK E L + D+G++ +V+ N+++D K RL+
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA-------QRLD 461
Query: 137 EMC------NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF----LS 186
+ C + + P TY S+++G R+ + + + ++ M++ +P L
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
N + + D K Y EM+ + C + L + C+ KA
Sbjct: 522 RNFFKCGRKEDGHKIYN-EML-RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G EA ++++ + E+G + Y ++ CK + +
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ +G+ P + + + E L KG+ L+ SSL++ +
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ + + +V T++ LLD L K + EA+ F MK+LK +
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNY 759
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC +++ KA EM K G KP+ TY +ISG
Sbjct: 760 ITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGL 804
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 196/505 (38%), Gaps = 79/505 (15%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + + +VL + L + + MR F PA SA L+ AL + L
Sbjct: 164 SNNTCIEIVLSFIKSRKL-REAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSK 124
+ M G + N ++ + ++ R G+ + L LLD +S V+YN+ ID + K
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A+ +EM L TY+S++ + ++ + + M + K +P +
Sbjct: 283 AGKVDMAWKFFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I GK A + +R + + C+L L ++G+V EA++ +
Sbjct: 342 --AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 245 LIS-----------------------ERGITVRDS--DYYAFVNV---------LCKEHQ 270
+ E + VRD+ D F NV LCK +
Sbjct: 400 EMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ C + + + P A+ + G+ E +L +LD + ++ +S
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 331 LMEYY--CSNR---------------------------------QIDKAIALHIKIEKLK 355
L+ + C + +I+K AL +I+ L
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFVIVVSRLCHLKELRKAM 414
D +Y +L+ GL K G EA +F MKE V+ + ++ V+ C ++ KA
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ +EM GH+P TY VI G
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGL 664
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 158/365 (43%), Gaps = 10/365 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y M G P + N +D +++ EI L+ + G P+ +++++
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591
Query: 90 QILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L ++G +E+ + + G + + YN VID + K G A+ L EM +
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTKGH 650
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY S++DG + ++ + + + K + + + +I +G+ A
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS--LIDGFGKVGRIDEA 708
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+I + + + T C+L AL K + EA+ + + + T Y ++
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + + +++ ++G+ P + ++ G E + L +KG + D
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF 383
S ++++E + + A L + +LKG S+ T VLLD L K +E+A +
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRL-FEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVG 887
Query: 384 DYMKE 388
++E
Sbjct: 888 AVLRE 892
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 105/276 (38%), Gaps = 37/276 (13%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ A + V+D + G ++ M+ G P V +++D L + + + A L+
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAA 131
G+ N V+Y+ +ID + K G A
Sbjct: 679 EAKSKGIELN------------------------------VVIYSSLIDGFGKVGRIDEA 708
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL--MVEKKLLPKHFLSGND 189
+ + E+ + LTP T++ +LD + E E+S+ +V M + K P +
Sbjct: 709 YLIMEELMQ-KGLTPNVYTWNCLLDALVKAE--EISEALVCFQSMKDLKCTPNYITYS-- 763
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L + K A + ++ + + T M+ L+K G + EA ++ E+
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
G + Y A + L ++ + L + +G
Sbjct: 824 GGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 187/432 (43%), Gaps = 26/432 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ +Y +++ P++ N +++ E+ A + +++ G P+ T + + +
Sbjct: 67 AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126
Query: 91 ILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC +GK L D I + V Y ++I+ K G+ AA L ++ +G+ +
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKI-DGKLVN 185
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
YS+I+D + + + + M+ KK+ P + +I +G+ A
Sbjct: 186 TNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD--VVTFSALIYGFCMVGQFKEAF 243
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKE-----------------AIQIYHLISE 248
+F I T ++ AL KEG KE A ++++I +
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGK 303
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
R +T Y + LCK +E L ++ +G P + S + C +
Sbjct: 304 RRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISH 363
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
ELL + +G D +S + C N Q+DKA+AL KI+ ++ TY++L+D
Sbjct: 364 AWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILID 423
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K+GR E A IF D + + V+ ++ I+++ LC +AM ++M G P
Sbjct: 424 GLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTP 483
Query: 428 DEATYKQVISGF 439
D TY+ +I
Sbjct: 484 DVVTYETIIRAL 495
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 174/432 (40%), Gaps = 64/432 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ V++CY H G V + G+ P L+ L ++ A + +
Sbjct: 85 TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVID-------- 120
+ G N+ ++ ++ LC+ G+ L +L D + ++ VMY+ +ID
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLV 204
Query: 121 -----FYSKK----------------------GDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
YS+ G F AF +EM N+ P T++
Sbjct: 205 TEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMV-LTNINPDVCTFNI 263
Query: 154 ILDGARRYEKTEVSDRIVGLM---VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++D + T+ + ++ +M V + KH + +I K ++ +I KR
Sbjct: 264 LVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFN----IIGKRRVTPDVHSYTIIIKR 319
Query: 211 AC-----DEKIELQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
C DE + L ++ T ++ L K R+ A ++ + RG
Sbjct: 320 LCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPAD 379
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y +F++ LCK HQ ++ L++ + ++G P + + C +G+++ + +
Sbjct: 380 VITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQ 439
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+L KG + + + ++ C D+A+ L K+E + DV TY+ ++ LFK+
Sbjct: 440 DLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKND 499
Query: 375 RMEEAVRIFDYM 386
+A ++ M
Sbjct: 500 ENHKAEKLLREM 511
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 136/330 (41%), Gaps = 27/330 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D + L + E+Y M V P V +AL+ + + A L+ MV
Sbjct: 192 STIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVL 251
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD------------SGIYSSV---------- 113
++P+ T++++ LC+ G + +L +++ +
Sbjct: 252 TNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVH 311
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
Y ++I K A NEM C G +TP TYSS++DG + E+ + ++
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEMRCKG--ITPDKVTYSSLIDGLCKSERISHAWELLD 369
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M + P ++ + + L + A + K+ D+ I+ +T ++ L K
Sbjct: 370 QM-HARGQPADVITYTSF-LHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
EGR + A I+ + +G V Y +N LC E +E LL + + G P +
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ + + + E+LL ++ +GLL
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIARGLL 517
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 6/181 (3%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G S ++D E+ M G V + L AL + +++
Sbjct: 338 CKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVD 397
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVI 119
A L + G+ PN T++++ LC+ G+FE + LL G +V YN++I
Sbjct: 398 KAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMI 457
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ +G F A L +M TP TY +I+ + ++ +++++ M+ + L
Sbjct: 458 NGLCLEGLFDEAMTLLEKM-EDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Query: 180 L 180
L
Sbjct: 517 L 517
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 194/405 (47%), Gaps = 12/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+VP+V A NA+L AL + A + +M+ DGV+PN +T++++ + LC G +
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L +L +G +V+ YN ++ + + G+ A +RL M L P T++S+++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA-ERLVGMMLDGGLKPNLVTFNSMVN 228
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K E + ++ M+ + L P + ++ G ++ A +F + I
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGV--SYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + K G ++ A+ + + ERG+ + + + A ++ CK+ ++
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+R + + P + + + C G+ E ELL + KGL D S+++ YC
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406
Query: 337 SNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
N A L+ ++ + KG L D TY L+ L ++ R+ +A +F M +L +
Sbjct: 407 KNCDTHSAFELNQQMLE-KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE 465
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + +A+ HD+M+K G PD TY +I+G
Sbjct: 466 FTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 173/402 (43%), Gaps = 22/402 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + L + R MR G P V N L+ A +R E+ A L G M+ G+ PN T
Sbjct: 163 RGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVT 222
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + +C++GK E + D + V YN ++ Y K G A EM
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD-- 197
+ + P T++S++ + E + +V M E+ L N+ L D
Sbjct: 283 Q-KGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGL------QMNEVTFTALIDGF 335
Query: 198 MGKTYAAEMIFK----RACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGIT 252
K + + + R C K + C ++ GR+ EA ++ H + +G+
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSV---VCYNALINGYCMVGRMDEARELLHEMEAKGLK 392
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ CK L + ++E+G +P A+ S + C + + + L
Sbjct: 393 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVL 452
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
++ GL D F +SL++ +C +++A++LH K+ K DV TY VL++GL K
Sbjct: 453 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSK 512
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
R EA ++ + + + +++ + C EL+ +
Sbjct: 513 SARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVL 554
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 156/380 (41%), Gaps = 42/380 (11%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D + KG D L R MR P+V NAL++ + A L M
Sbjct: 328 FTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Query: 75 RDGVSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFG 129
G+ P+ T+S + C++ FE+ +L+ G+ ++ Y+ +I ++
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLS 447
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A M L P TY+S++DG + E + + MV+ +LP +
Sbjct: 448 DAHVLFKNMIK-LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPD--VVTYS 504
Query: 190 YVIQKLSDMGKTY-AAEMIFKRACDEKIELQ---DDTCGC-----------MLKALSKEG 234
+I LS + A +++FK +E I D C +LK +G
Sbjct: 505 VLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 564
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+ EA ++Y + +R + S Y ++ C+ + + +++RG+ P +
Sbjct: 565 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTI 624
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ G E ++++ +L+ CCS ++ + KA+ I +
Sbjct: 625 SLIRGLFENGMVVEADQVIQQLLN--------CCS------LADAEASKAL---IDLNLN 667
Query: 355 KGSLDVATYDVLLDGLFKDG 374
+G++D A DV L G+ KDG
Sbjct: 668 EGNVD-AVLDV-LHGMAKDG 685
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 181/402 (45%), Gaps = 19/402 (4%)
Query: 51 NALLDALYRQNEI-RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLL 105
N +L +L R + R G M RDGV+P T++ + LC+S E+ L+
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 106 DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ G + V+ YN +ID K GD A RL+ + R P TYS +++G + +
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEA-RRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 165 EVSDRIVGLMVEKK--LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ + ++ M K +LP + ++ N + + L T A + + D + + DT
Sbjct: 124 DEARELIQEMTRKSCDVLP-NIITYNSF-LDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181
Query: 223 C--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ L K G++ EA ++ + G Y A VN LCK + E ++
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG-----LLLDSFCCSSLMEYY 335
+V++G P + S V + C + E ELL + +G L+ D + L+
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS- 394
C ++A AL ++ DV T+ L+DGL K G++E A I D M L V +
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ +V LC + +A + +EM+ G PD TY ++
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLV 403
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 157/344 (45%), Gaps = 13/344 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S ++D G + V+ M G+VP V NAL++ L + +++ A + +M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM------YNLVIDFYS 123
V GV+P+ T+S++ C++ + E++ G+ G +V+ +N++I
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K G+F A EM +NL P T+ +++DG + + E + I+ LM + P +
Sbjct: 303 KAGNFEQASALFEEMV-AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV-PPN 360
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++ N ++ L G+ A + T G ++ AL + R +A+Q+
Sbjct: 361 VVTYN-ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ G Y V+ L K + E+ +L ++V +G+ P + + +
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
G ELL VL KG+L D+ CSS++++ C + ++D A+
Sbjct: 480 GNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAM 523
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 174/418 (41%), Gaps = 41/418 (9%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G+E++ + G P V N L+D+L + ++ A L+G M G PN T+S++
Sbjct: 56 GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN 115
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGR- 142
LC+ G+ + L+ S + YN +D K+ A + + + +G
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
++P T+S+++DG + + + + + M+ +P + ++ L K
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY--NALVNGLCKADKME 233
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + D+ + T ++ A K RV EA+++ H ++ RG T
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT---------P 284
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
NVL +P + + +A C G +++ L ++ K L
Sbjct: 285 NVL---------------------VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 323
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +L++ C Q++ A + + L +V TY+ L+ GL K GR+EEA +
Sbjct: 324 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 383
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M V S ++ +V LC A++ E+ G PD TY ++ G
Sbjct: 384 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 6/257 (2%)
Query: 189 DYVIQKLSDMGKTYAAEMIFK-RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ V+Q L G T A IF+ + + T ++ L K + ++++ +
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
ERG Y ++ LCK EE L D+ RG +P + S + C G+
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 308 EVEELLSAVLDKG--LLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATY 363
E EL+ + K +L + +S ++ C +A L ++ L+ S D T+
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+DGL K G+++EA +FD M V + ++ +V+ LC ++ +A + M+
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY ++ F
Sbjct: 245 KGVTPDVITYSVLVDAF 261
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 183/406 (45%), Gaps = 11/406 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + N LL L + +I A L+ MV+ G P+ T+S + LC+ G +
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL + G +V+ YN +ID K A D +EM + P TYSSIL
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK-EGIPPDVFTYSSILH 123
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + MVE+ ++P +I L A ++F+ ++ +
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTF--TILIDGLCKKRMISEAWLVFETMTEKGL 181
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
E T ++ ++ EA ++++++ +G Y +N CK + +E G
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL ++ + P S + C G+ +E +ELL + GLL + S +++ C
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD--YMKELKVVSS 394
+ +D+A L +++ K ++ Y +L++G+ G++E A +F ++K ++ +
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ-PTV 360
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ +++S L +A + EM G P+ TY +I GF+
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 180/449 (40%), Gaps = 53/449 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S +++ G L++ + M G P V A N ++D+L + + A
Sbjct: 40 GHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEA 99
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDF 121
+ MV++G+ P+ FT+S + C G+ L + I + V + ++ID
Sbjct: 100 MDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDG 159
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
KK A+ M + L P TY++++DG + + + ++ +M K P
Sbjct: 160 LCKKRMISEAWLVFETMTE-KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP 218
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
++Y ++ K GR+ EA
Sbjct: 219 NV----------------RSY---------------------NILINGHCKSGRIDEAKG 241
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ +S + +T Y + C+ +P+E LL+++ G +P + S + C
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G E ELL A+ + + + F + L+E C+ +++ A L + V
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY V++ GL K G EA +F M + +S ++ +++ + A++ +EM
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Query: 421 LKMGHKPDEATYK---------QVISGFM 440
+ G D +T++ ++IS FM
Sbjct: 422 VGKGFSADSSTFRMLSDLESSDEIISQFM 450
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 188/432 (43%), Gaps = 15/432 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P N L+ L+ N+ A L M
Sbjct: 152 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQM 211
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
V+ G P+ T+ V LC+ G ++ L LL + G + V+YN +ID K
Sbjct: 212 VQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI 271
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF N+M + + P TY+S++ Y + + R++ M+E+K+ P +
Sbjct: 272 DDAFALFNKM-ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPN--VVTF 328
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I GK AE ++ I+ T ++ R+ EA ++ L+
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + EE L R++ +RG + + + + G
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C +++KA+ + ++K K D+ TY+++++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS--FVIVVSRLCH--LKELRKAMKNHDEMLKMG 424
G+ K G++E+ +F + LK V + + ++S C LKE A+ EM + G
Sbjct: 509 GMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADAL--FREMKEDG 565
Query: 425 HKPDEATYKQVI 436
PD Y +I
Sbjct: 566 TLPDSGCYNTLI 577
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 182/430 (42%), Gaps = 44/430 (10%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
N L++ R++++ LA + G M++ G P+ T S + C S + + L+D
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178
Query: 108 ---------------GIY----------------------SSVMYNLVIDFYSKKGDFGA 130
G++ V Y V++ K+GD
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M G+ + Y++I+DG +Y+ + + + M K + P F +
Sbjct: 239 ALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS-- 295
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + + KI T ++ A KEG++ EA ++Y + +R
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + ++ + P + + + C + +E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ ++ ++L++ D A + K+ D+ TY +LLDGL
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G++E+A+ +F+Y+++ K+ ++ I++ +C ++ + G KP+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 430 ATYKQVISGF 439
Y +ISGF
Sbjct: 536 IIYTTMISGF 545
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 174/414 (42%), Gaps = 48/414 (11%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL--------LDSGIYSSVMYNLVID 120
L+G MV+ P+ ++ + + + KF++V+ L + +YS YN++I+
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS---YNILIN 123
Query: 121 FYSKKGDFGAAFDRLNEM-------------------CNGRNLT---------------P 146
+ ++ A L +M C+ + ++ P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
T+++++ G + K + +V MV++ P G V+ L G A
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA--VVNGLCKRGDIDLALS 241
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ K+ KIE ++ L K + +A +++ + +GI Y + ++ LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ + LL +++ER P + S + + +GK E E+L ++ + + D F
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SSL+ +C + ++D+A + + +V TY+ L+ G K R+EE + +F M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +V ++ ++ ++ L + A K +M+ G PD TY ++ G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 7/254 (2%)
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
LS N + KL D + EM+ R +E +L A++K + I +
Sbjct: 51 LSRNALLNLKLDDAIGLFG-EMVQSRPLPSIVEFNK-----LLSAIAKMKKFDLVISLGE 104
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ I+ Y +N C+ Q +L +++ GY P + LS + C
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSK 164
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ + L+ +++ G D+ ++L+ + + +A+AL ++ + D+ TY
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKM 423
+++GL K G ++ A+ + M++ K+ + + ++ LC K + A ++M
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284
Query: 424 GHKPDEATYKQVIS 437
G +PD TY +IS
Sbjct: 285 GIRPDVFTYNSLIS 298
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 186/432 (43%), Gaps = 51/432 (11%)
Query: 14 ALSLVLD----CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
A S+++D Y G LE + YGF + +CN +L +L ++ I + +
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSK 124
Y M+R + N T+ +V LC+ GKF+ VV + G SV+ YN +ID Y K
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A L EM R + P T++ ++DG R E + ++ M + L P
Sbjct: 277 AGKMFKADALLKEMVAKR-IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
T ++ L G++ EA+ +
Sbjct: 336 -------------------------------------TYNSLINGLCSNGKLDEALGLQD 358
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+S G+ Y A +N CK+ +E +L D+ +RG P + + + + G
Sbjct: 359 KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAG 418
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ + L S +LD G+ + + L+ +C + +A L ++E D+ TY+
Sbjct: 419 RMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478
Query: 365 VLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
+L+D L K G +AVR+ D M K+ + + ++ +++ C+ +L +A + +EM
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
Query: 421 LKMGHKPDEATY 432
L+ G P+ TY
Sbjct: 539 LEKGLIPNRTTY 550
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F RA D L +C ML +L KEGR+ +Y + R I V + +N LCK
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ ++ ++ D+ G+ P + + + C GK + + LL ++ K + +
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ L++ +C + + A + ++++ +V TY+ L++GL +G+++EA+ + D M
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + ++ +++ C K L++A + D++ K G P+ T+ +I +
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 191/465 (41%), Gaps = 60/465 (12%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
G + LEV ++M G P L+D +Q + A ++ +M G++PN+F
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGI----------YSSVM------------------- 114
T++ + + G E L + D I Y++++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 115 -----------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
YNL+ID Y K D A + L EM R LTP TYS ++ G
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM-KARKLTPSPFTYSVLISGLCHSSD 466
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ ++ ++ M+ + P F+ G YV + +M MI L D
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV------LPD 520
Query: 221 DTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
C C++ L + +V+EA + + E+GI Y AF+N+ K + + +
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D++ G +P + + + C G E +L+KGL+ D S+++ N
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+ +A+ + +K K DV Y+ L+ G K+G +E+A +++D M + + ++
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN---IV 697
Query: 400 VVSRL------CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
V + L C L +A K DEM+ G PD Y +I G
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 742
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 186/422 (44%), Gaps = 12/422 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + ++ M + G P N L+D + +++ A L M ++P+ FT+
Sbjct: 395 GEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEM-C 139
S++ LC S + +LD I + V MY +I Y ++ + A + L M
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
NG + P Y+ ++ G R +K E + ++ M EK + P G I S G
Sbjct: 515 NG--VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG--AFINLYSKSG 570
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ AE FK I + ++K G EA+ + + E+G+ Y
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A ++ L K + +E G+ ++ G +P + ++ C +G ++ +L +L
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 320 GLLLDSFCCSSLM-EY-YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G+ + ++L+ +Y YC + + +A L ++ S D Y +L+DG K+G +E
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750
Query: 378 EAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+A+ +F ++ V S S+F ++ C ++ +A + D+M+ P+ TY +I
Sbjct: 751 KALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 810
Query: 438 GF 439
+
Sbjct: 811 AY 812
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 171/377 (45%), Gaps = 11/377 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G ++ L ++ M G +P + A +A++ +L + + + A ++ ++ GV P+ F +
Sbjct: 605 GNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI------DF-YSKKGDFGAAFDRLNEM 138
+ + C+ G E L D +++ + N+V+ D+ Y K G+ AF +EM
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEM 724
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ + ++P Y ++DG + E + + L E + LS + +I
Sbjct: 725 IS-KGISPDGYIYCILIDGCGKEGNLE---KALSLFHEAQQKSVGSLSAFNSLIDSFCKH 780
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
GK A +F D+K+ T ++ A K ++EA Q++ + R I Y
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 840
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ + + ++ L +D+ RG A+ ++ C +GK E +LL+ L
Sbjct: 841 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+G+ L+ +L+ + C +QI + L ++ K + SL T + LL G +K G +E
Sbjct: 901 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 960
Query: 379 AVRIFDYMKELKVVSSS 395
A ++ M+ L V +S
Sbjct: 961 ASKVLGVMQRLGWVPTS 977
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 187/435 (42%), Gaps = 10/435 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + +D + G + V+ GF P + CN L+ L + N + L +
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSG---KFEVVLGLLDSGIYSSVM-YNLVIDFYSKK 125
YG+MV + P+ +T++ V + C+ G K ++VL ++ ++ YN I +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQT 289
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A + + ++ + L P TY+ ++DG + ++++ + I M L P F
Sbjct: 290 GAVDEALE-VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I G A I ++L T M+ ++K G + +A+ +++
Sbjct: 349 Y--TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI Y ++ K H + C LL ++ R P S ++ C
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYD 364
++ E+L ++ G+ + F +L++ Y + + AI L +KI G L D+ Y+
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL-LKIMIANGVLPDLFCYN 525
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ GL + ++EEA + M E + ++ ++ ++ E++ A + +ML
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585
Query: 424 GHKPDEATYKQVISG 438
G P+ Y +I G
Sbjct: 586 GIVPNNVIYTILIKG 600
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF---KRACDEKIELQDDTCGC 225
++ G MVE K++P + N VI+ +G +M+ ++ C + T
Sbjct: 228 KVYGSMVEAKIVPDVYTYTN--VIKAHCKVGDVIKGKMVLSEMEKECKPNLF----TYNA 281
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ L + G V EA+++ L+ E+G+ Y V+ CK+ + +E + + G
Sbjct: 282 FIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG 341
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + +G +E + ++ +GL L+ ++++ ++ KA+
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
+L ++ D TY++L+DG K M +A + MK K+ S ++ +++S L
Sbjct: 402 SLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
CH +L+KA + D+M++ G KP+ Y +I ++
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 137/360 (38%), Gaps = 75/360 (20%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A S ++ S G + + V+ G VP V N+L+ ++ +I AS LY M
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687
Query: 74 VRDGVSPNKFTWSLVAQIL--CRSGKFEVVLGLLDSGIYSSV------------------ 113
+ +G++PN ++ + C+SG L D I +
Sbjct: 688 LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 747
Query: 114 ---------------------MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+N +ID + K G A + ++M + + LTP TY+
Sbjct: 748 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD-KKLTPNIVTYT 806
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHF------LS----GNDY-VIQKLSDM--- 198
++D + E E ++++ M + ++P LS GN + +I DM
Sbjct: 807 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 866
Query: 199 -------------------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
GK+ A + ++ E I+L+DD ++ L KE ++
Sbjct: 867 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 926
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++ + + +++ + K +E +L + G++P ++ L+ +++
Sbjct: 927 LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 986
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 13/371 (3%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ ++ + L +G + + + D+ V YN++I Y
Sbjct: 210 WKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYC 269
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL---L 180
+ G A RL+EM LTP TY +++ V + M E+ + +
Sbjct: 270 RAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDI 329
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P+H VI L GK + +F+R ++ ++ K GR KEA+
Sbjct: 330 PQH---AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAM 386
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + G+ + Y VN LC+ + +E R E+G A+ + +
Sbjct: 387 ALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGF 446
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G + +EL ++ KG + DS+C + L++ + ++D A AL+ ++E V
Sbjct: 447 GKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTV 506
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY +L+DGLFK+ + EEA++ +D M + + ++++F + S LC + +A + DE
Sbjct: 507 YTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDE 566
Query: 420 MLKMGHKPDEA 430
+ MG P+ A
Sbjct: 567 LAPMGVIPETA 577
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D A LV+ G +G+ V+ M G + AL+D++ + + A
Sbjct: 326 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 385
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M G+ + T+ ++ LCR GK + + S + N +
Sbjct: 386 MALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIF------- 438
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
Y+S++DG + + S + M+ K +P +
Sbjct: 439 ------------------------YTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYC- 473
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ G+ A ++KR D+ + T ++ L KE + +EA++ + +
Sbjct: 474 -YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 532
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + + LC + C +L ++ G IP + C G++
Sbjct: 533 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAH-EDMINVLCKAGRF 591
Query: 307 KEVEELLSAVLDKG 320
K+ +L ++ KG
Sbjct: 592 KQACKLADGIVQKG 605
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 233 EGRVKEAIQIYHLISERGIT--VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
EG I ++ + ERG+ + Y + LCK+ +P E + +++RG A
Sbjct: 307 EGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANA 366
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + S G+ KE L + D GL LDS ++ C ++D+A+A
Sbjct: 367 AIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRS 426
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
++ +++ Y L+DG K G ++++ +F+
Sbjct: 427 CQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE-------------------------- 460
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD Y +I G
Sbjct: 461 --------EMIAKGFVPDSYCYNVLIDGL 481
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G D +Y+ M G V L+D L+++++ A + AM+
Sbjct: 475 NVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMID 534
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G++P + +A LC SGKF +LD G+ + +I+ K G F A
Sbjct: 535 KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFKQA 594
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+ + PG + +++ R+ T+++ ++V
Sbjct: 595 CKLADGIVQKGREIPG-RVRTMMINALRKAGNTDLAVKLV 633
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 50/252 (19%)
Query: 2 IQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
+SC+ + +A+ + ++D + G+ E++ M GFVP N L+D L +
Sbjct: 424 FRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAK 483
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI 119
+ A LY M DG +T++++ L + K E L D+ +I
Sbjct: 484 SGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDA----------MI 533
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D + +TP + + ++ G K + RI+ + +
Sbjct: 534 D---------------------KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGV 572
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC-------DEKIELQDDTCGCMLKALSK 232
+P+ + ++ +I L G+ FK+AC + E+ M+ AL K
Sbjct: 573 IPE---TAHEDMINVLCKAGR-------FKQACKLADGIVQKGREIPGRVRTMMINALRK 622
Query: 233 EGRVKEAIQIYH 244
G A+++ H
Sbjct: 623 AGNTDLAVKLVH 634
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 180/416 (43%), Gaps = 41/416 (9%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D S S ++ Y++ + + ++V+ M V GF P + AC LL++L + +
Sbjct: 127 DINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWK 186
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYS 123
+Y M R GV N ++++ C+SG E LL V YN +I Y
Sbjct: 187 VYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYC 246
Query: 124 KKGDFGAAF---DRL------------NEMCNG-----------------RNLTPGFSTY 151
KKG A DR+ N + +G R+ TP TY
Sbjct: 247 KKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTY 306
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++DG R + + R+ M + L P + + +++KL ++G+ A +
Sbjct: 307 TTLIDGYCRLNDLDQALRLREEMEAQGLYPT--VVTYNSILRKLCEIGRIRDANKLLNEM 364
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
++KIE + TC ++ A K G +K A+++ + + E G+ + Y A ++ CK +
Sbjct: 365 SEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREM 424
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ LL +++ G+ P S V C + + V +L + KGL +D +L
Sbjct: 425 DGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRAL 484
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +C Q+D A + + + KG+L D Y L +K G+ A + D M
Sbjct: 485 IRRFCKREQVDYAKKI-FSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEM 539
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 34/251 (13%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C +L +L+K+ ++Y ++ G+ Y ++ CK E+ LL ++
Sbjct: 168 CTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEME 227
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEV---------EELLSAVLDKGLLLDSFC------ 327
+ P + ++ C KG E E + ++ L+ FC
Sbjct: 228 SKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMR 287
Query: 328 ------------------CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++L++ YC +D+A+ L ++E V TY+ +L
Sbjct: 288 EAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRK 347
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + GR+ +A ++ + M E K+ + + +++ C + +++ A+K + M++ G K D
Sbjct: 348 LCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLD 407
Query: 429 EATYKQVISGF 439
+ TYK +I GF
Sbjct: 408 QFTYKALIHGF 418
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+E ++ ++ G C+ L+ +R D ++ K+ ++ ++ Y+VL
Sbjct: 147 QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVL 206
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMG 424
+ K G +E+A + M E K V F ++S C +A+ D M + G
Sbjct: 207 IHACCKSGDVEKADNLLSEM-ESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREG 265
Query: 425 HKPDEATYKQVISGF 439
KPD TY +I GF
Sbjct: 266 IKPDIVTYNSLIHGF 280
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 204/461 (44%), Gaps = 49/461 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + ++ ++ G +P+V + N++L L ++ ++ A L+ AM +D PN
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPN 390
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC +GK E + D +G++ +++ N+++D K F A++
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF- 449
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSGNDYVIQK 194
E + R P TY S++DG + + + R+ M++ P + S +I+
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTS----LIRN 505
Query: 195 LSDMGKTYAAEMIFK----RACDEKIELQDDTCGCMLKA--------------------- 229
G+ IFK R C + L + C+ KA
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565
Query: 230 ----------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
L+K G+ +E I+H + ++G + Y A V+ CK + ++ +L
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ + P + + E L KG+ L+ SSL++ +
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ID+A + ++ K + +V T++ L+D L K + EA+ F MKE+K ++ ++
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I+++ LC +++ KA EM K G P+ TY +I+G
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGL 786
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 191/469 (40%), Gaps = 51/469 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++ +DC+ G + + ++ G P + +++ L + + A L+G M
Sbjct: 256 NVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMET 315
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGA 130
+ P + ++ + +G+FE LLD I S V +N ++ KK
Sbjct: 316 ERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDE 375
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A M ++ P STY+ I+D K E + I M L P + L+ N
Sbjct: 376 ALTLFEAM--KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFP-NLLTVN-I 431
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ +L K A +F+ A T ++ L K+G V +A +++ + + G
Sbjct: 432 MVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491
Query: 251 ITVRDSDYYAFV------------NVLCKEH-----QP------------------EEVC 275
Y + + + + KE QP E+
Sbjct: 492 HNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGR 551
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ D+ G++P S + G+ +E + A+ +G LD+ +++++ +
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGF 611
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKV 391
C + ++DKA + +++ + VATY ++DGL K R++EA +F+ K EL V
Sbjct: 612 CKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ SS + ++ + E + +EM+K G P+ T+ ++ +
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLIL---EEMMKKGLTPNVYTWNSLMDALV 717
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 146/379 (38%), Gaps = 70/379 (18%)
Query: 8 RDSQSDA--LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R Q D L+ +DC G G ++ ++ YGF+P V + + L+ L + + R
Sbjct: 525 RGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARE 584
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
S ++ AM + G + LD+ Y N V+D + K
Sbjct: 585 TSSIFHAMKQQGFA-------------------------LDARAY-----NAVVDGFCKS 614
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A++ L EM + + P +TY SI+DG
Sbjct: 615 GKLDKAYEVLEEM-KVKRVPPTVATYGSIIDG---------------------------- 645
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ K+ + + Y M+F+ A + IEL ++ K GR+ EA I
Sbjct: 646 ------LAKIDRLDEAY---MLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ ++G+T + + ++ L K + E + + E P S + C K
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + +GL+ + ++++ I A +L + + G+ D A+++
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816
Query: 366 LLDGLFKDGRMEEAVRIFD 384
L++G+ R EA +F+
Sbjct: 817 LIEGMSHANRAIEAYHVFE 835
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 151/371 (40%), Gaps = 25/371 (6%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D V MR F PA SA L+ A+ + A L M G ++ +
Sbjct: 165 DAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLV 224
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ L R G+ E L L+D S V+YN+ ID + K G+ A+ +E+ + L
Sbjct: 225 RALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL-KSQGL 283
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P +Y+S++ + + ++ + G M ++ +P + + M Y +
Sbjct: 284 KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAY---------AYNTMIMGYGS 334
Query: 205 EMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
F+ A +L++ C +L L K+ +V EA+ ++ + ++ S
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSST 393
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +++LC + EE ++RD +E G P + ++ V C K++ E+
Sbjct: 394 YNIIIDMLCMAGKVEEAY-MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+G +S SL++ +D A L + + + Y L+ F GR
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512
Query: 377 EEAVRIFDYMK 387
E+ +IF M
Sbjct: 513 EDGHKIFKEMN 523
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 137/316 (43%), Gaps = 9/316 (2%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCN-GRNL-TPGFSTYSSILDGARRYEKTEVSDRIVG 172
YN V+ F S D A L EM G + P + S L RR + E R++
Sbjct: 117 YNAVLPFLSH--DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAE---RVIA 171
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M K P S +I +++ + A + ++ + E+ +++AL++
Sbjct: 172 AMRRLKFRPA--FSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAR 229
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
EGRV+ A+ + + + Y ++ K + ++ +G P +
Sbjct: 230 EGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVS 289
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C G+ E EEL + + + ++ ++++ Y S Q + A L +++
Sbjct: 290 YTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLK 349
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK 412
+ V +++ +L L K +++EA+ +F+ MK+ +SS++ I++ LC ++ +
Sbjct: 350 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEE 409
Query: 413 AMKNHDEMLKMGHKPD 428
A DEM G P+
Sbjct: 410 AYMIRDEMEHAGLFPN 425
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 101/243 (41%), Gaps = 17/243 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+D + G EV M+V P V+ +++D L + + + A L+
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 662
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDF 128
G+ N +S + + G+ + ++ ++ G+ +V +N ++D K +
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722
Query: 129 GAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A F + EM +P TYS +++G R +K + M ++ L+P +
Sbjct: 723 NEALICFQSMKEM----KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN--V 776
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I L+ +G A +F+R + +++ +S R AI+ YH+
Sbjct: 777 VTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANR---AIEAYHV 833
Query: 246 ISE 248
E
Sbjct: 834 FEE 836
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 186/417 (44%), Gaps = 13/417 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++R+M GF P +L+ + ++ A L+ MV G P+ T +++ L
Sbjct: 316 ELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGL 375
Query: 93 CRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+SG FE ++ G +V+ Y +I SK G AF + M P
Sbjct: 376 CKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI-AHGCFPD 434
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT-YAAEM 206
TY +LDG + + + + +++ + + P L + +++ L D G +
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS--LVKGLCDGGSVENTLDD 492
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F+++ L C ++ L K GR+ EA +I+ + G + Y +N LC
Sbjct: 493 LFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552
Query: 267 K--EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ E++ E LL D+ GY+P A+ + C G+ ++L +G D
Sbjct: 553 RSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNAD 612
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L C Q+D+A++L ++ + G+ D A Y +++GL K ++E+A + FD
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFD 672
Query: 385 YM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA-TYKQVISGF 439
M + + + +++ +V LCH + +A + ML G Y +I GF
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGF 729
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 180/434 (41%), Gaps = 15/434 (3%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACN-ALLDALYRQNEIRLASCLYGAMVR 75
+++DC G+ EV+ M GFVP A + A++ L + ++ A ++G M +
Sbjct: 194 ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ ++ + L ++G + L +LD + + + V Y ++++ K G
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLER 313
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L + P Y+S++ G + + + + + MVE P + +
Sbjct: 314 A-EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD--VITHTV 370
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G A F+ + T +++ LSK GRV A +I + G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE-V 309
Y ++ CK + +E LL ++ + P S V C G + +
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++L LD C S++ C ++D+A + ++ D TY++L++G
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 370 LFKDGRMEEAVRIFDYMKELKVVS----SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L + R R F + +L++V + ++ + LC + E+ +A+K +E G
Sbjct: 551 LCRS-RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 426 KPDEATYKQVISGF 439
D Y + +G
Sbjct: 610 NADVVAYTALCTGL 623
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/449 (19%), Positives = 179/449 (39%), Gaps = 62/449 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF V N L++ L + ++ M++ G++PN F+++++ + R+ + +
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 102 LGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ + +L ++D K G AF+ +EM + P + +++++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ ++ + + + G M EK P ++ N +I L+ G A + +
Sbjct: 234 TLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNT-MIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T G ++ +L K G ++ A +++ +++ G Y + ++ K + +E C
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++VE GY P + + + C G +++ + ++ G C +++ Y
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG------CKPNVVTYTT 405
Query: 337 SNRQIDKAIALHIKIEKLKGSL------DVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+ + K + +KG + D TY LLDG K GR++EA ++ D EL
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD---ELD 462
Query: 391 VVSSSSFVIVVSR----------------------------------------LCHLKEL 410
SSS + + S LC L
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A + M+ G KPD TY +I+G
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGL 551
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 13/371 (3%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ ++ + L +G + + + D+ V YN++I Y
Sbjct: 206 WKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYC 265
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL---L 180
+ G A RL+EM LTP TY +++ V + M E+ + +
Sbjct: 266 RAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDI 325
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P+H VI L GK + +F+R ++ ++ K GR KEA+
Sbjct: 326 PQH---AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAM 382
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + G+ + Y VN LC+ + +E R E+G A+ + +
Sbjct: 383 ALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGF 442
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G + +EL ++ KG + DS+C + L++ + ++D A AL+ ++E V
Sbjct: 443 GKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTV 502
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY +L+DGLFK+ + EEA++ +D M + + ++++F + S LC + +A + DE
Sbjct: 503 YTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDE 562
Query: 420 MLKMGHKPDEA 430
+ MG P+ A
Sbjct: 563 LAPMGVIPETA 573
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D A LV+ G +G+ V+ M G + AL+D++ + + A
Sbjct: 322 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 381
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M G+ + T+ ++ LCR GK + + S + N +
Sbjct: 382 MALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIF------- 434
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
Y+S++DG + + S + M+ K +P +
Sbjct: 435 ------------------------YTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYC- 469
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ G+ A ++KR D+ + T ++ L KE + +EA++ + +
Sbjct: 470 -YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 528
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + + LC + C +L ++ G IP + C G++
Sbjct: 529 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAH-EDMINVLCKAGRF 587
Query: 307 KEVEELLSAVLDKG 320
K+ +L ++ KG
Sbjct: 588 KQACKLADGIVQKG 601
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 233 EGRVKEAIQIYHLISERGI--TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
EG I ++ + ERG+ + Y + LCK+ +P E + +++RG A
Sbjct: 303 EGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANA 362
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + S G+ KE L + D GL LDS ++ C ++D+A+A
Sbjct: 363 AIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRS 422
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
++ +++ Y L+DG K G ++++ +F+
Sbjct: 423 CQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE-------------------------- 456
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD Y +I G
Sbjct: 457 --------EMIAKGFVPDSYCYNVLIDGL 477
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G D +Y+ M G V L+D L+++++ A + AM+
Sbjct: 471 NVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMID 530
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G++P + +A LC SGKF +LD G+ + +I+ K G F A
Sbjct: 531 KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFKQA 590
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+ + PG + +++ R+ T+++ ++V
Sbjct: 591 CKLADGIVQKGREIPG-RVRTMMINALRKAGNTDLAVKLV 629
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 50/252 (19%)
Query: 2 IQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
+SC+ + +A+ + ++D + G+ E++ M GFVP N L+D L +
Sbjct: 420 FRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAK 479
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI 119
+ A LY M DG +T++++ L + K E L D+ +I
Sbjct: 480 SGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDA----------MI 529
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D + +TP + + ++ G K + RI+ + +
Sbjct: 530 D---------------------KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGV 568
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC-------DEKIELQDDTCGCMLKALSK 232
+P+ + ++ +I L G+ FK+AC + E+ M+ AL K
Sbjct: 569 IPE---TAHEDMINVLCKAGR-------FKQACKLADGIVQKGREIPGRVRTMMINALRK 618
Query: 233 EGRVKEAIQIYH 244
G A+++ H
Sbjct: 619 AGNTDLAVKLVH 630
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 192/442 (43%), Gaps = 46/442 (10%)
Query: 6 EGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+G D D +S V++ + +G Y M G +P V ++++ AL + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLV 118
A + +MV++GV PN T++ + C SG+ + +G L G+ V+ YN +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+D+ K G A + M R L P +TY ++L G ++ LMV
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P H+ +F ++ A +K+G+V +
Sbjct: 370 IHPNHY----------------------VFS---------------ILICAYAKQGKVDQ 392
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ ++ + ++G+ Y + +LCK + E+ +++ P + + +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
S C KW + +EL+ +LD+G+ LD+ +S+++ +C ++ ++ L + ++
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D+ TY L+DG G+M+EA ++ M + + ++ +++ C + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G PD TY ++ G
Sbjct: 573 REMESSGVSPDIITYNIILQGL 594
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 167/375 (44%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSS--VMYNLVIDFYSKK 125
M + G PN F+++++ + LC + + L LL D G V Y VI+ + K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
GD A+ +EM + R + P TYSSI+ + + + + ++ MV+ ++P
Sbjct: 213 GDLDKAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN--C 269
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ G+ A K+ + +E T ++ L K GR EA +++
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+++RG+ + Y + + E+ GLL +V G P S + + +GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + S + +GL D+ +++ C + +++ A+ ++ + S Y+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ L + ++A + M + + + + F ++ C + ++ K D M+++G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 425 HKPDEATYKQVISGF 439
KPD TY +I G+
Sbjct: 510 VKPDIITYSTLIDGY 524
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 168/422 (39%), Gaps = 46/422 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G + +++ M G P ++ LL + + L MVR+G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
+ PN + +S++ + GK + V + G+ +V Y VI K G A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M + R L+PG Y+S++ ++K
Sbjct: 430 RYFEQMIDER-LSPGNIVYNSLIHSLCIFDKW---------------------------- 460
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D K EM+ + C + I ++ + KEGRV E+ +++ L+ G+
Sbjct: 461 ----DKAKELILEMLDRGICLDTIFFNS-----IIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C + +E LL +V G P + + + C + ++ L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ G+ D + +++ R+ A L++ I + L+++TY+++L GL K
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 373 DGRMEEAVRIFDY--MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ +EA+R+F + +L+ + + +F I++ L + +A + G PD
Sbjct: 632 NNLTDEALRMFQNLCLTDLQ-LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 431 TY 432
TY
Sbjct: 691 TY 692
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 138/315 (43%), Gaps = 8/315 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+ +G + V+ MR G P ++ L + + A + M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+ +SP ++ + LC K+ E++L +LD GI ++ +N +ID + K+G
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ ++L ++ + P TYS+++DG K + + +++ MV + P +
Sbjct: 497 ES-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY--N 553
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + + A ++F+ + T +L+ L + R A ++Y I+E
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + S Y ++ LCK + +E + +++ + + + G+ E
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 310 EELLSAVLDKGLLLD 324
++L +A+ GL+ D
Sbjct: 674 KDLFAALSANGLVPD 688
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV P+ T+S + C +GK + LL S +
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V YN +I+ Y K A EM ++P TY+ IL G + +T
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + VG+ L LS + ++ L T A +F+ C ++L+ T
Sbjct: 602 AAKELYVGITESGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
M+ AL K GR EA ++ +S G+ V D Y+ +
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGL-VPDVRTYSLM 695
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL-LSAVLDKGLLLDSFCCSSLMEYYC 336
L +V+++G+I A+ + + C + + ++ L + G + + F + L++ C
Sbjct: 114 LGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC 173
Query: 337 SNRQIDKAIALHIKIEKLKG--SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
+ + +A+ L + G DV +Y +++G FK+G +++A + M + ++ +
Sbjct: 174 DDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ LC + + KAM+ M+K G P+ TY ++ G+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI-KIEKL 354
+ S C G+ L V+ KG ++D+ + +++ C++++ A+ + + ++ +L
Sbjct: 97 LMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQL 156
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LKVVSSSSFVIVVSRLCHLK 408
+V +Y++LL GL D R +EA+ + M + VV S+ V++
Sbjct: 157 GCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEG 213
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L KA + EML G P+ TY +I+
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 192/442 (43%), Gaps = 46/442 (10%)
Query: 6 EGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+G D D +S V++ + +G Y M G +P V ++++ AL + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLV 118
A + +MV++GV PN T++ + C SG+ + +G L G+ V+ YN +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+D+ K G A + M R L P +TY ++L G ++ LMV
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P H+ +F ++ A +K+G+V +
Sbjct: 370 IHPNHY----------------------VFS---------------ILICAYAKQGKVDQ 392
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ ++ + ++G+ Y + +LCK + E+ +++ P + + +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
S C KW + +EL+ +LD+G+ LD+ +S+++ +C ++ ++ L + ++
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D+ TY L+DG G+M+EA ++ M + + ++ +++ C + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G PD TY ++ G
Sbjct: 573 REMESSGVSPDIITYNIILQGL 594
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 167/375 (44%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSS--VMYNLVIDFYSKK 125
M + G PN F+++++ + LC + + L LL D G V Y VI+ + K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
GD A+ +EM + R + P TYSSI+ + + + + ++ MV+ ++P
Sbjct: 213 GDLDKAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN--C 269
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ G+ A K+ + +E T ++ L K GR EA +++
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+++RG+ + Y + + E+ GLL +V G P S + + +GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + S + +GL D+ +++ C + +++ A+ ++ + S Y+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ L + ++A + M + + + + F ++ C + ++ K D M+++G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 425 HKPDEATYKQVISGF 439
KPD TY +I G+
Sbjct: 510 VKPDIITYSTLIDGY 524
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C GR L GF+ +++ R + + + GL +K+ D V+++++ +
Sbjct: 103 CAGR-LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS-----DAMDIVLRRMTQL 156
Query: 199 G---KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G ++ ++ K CDE R +EA+++ ++ + G
Sbjct: 157 GCIPNVFSYNILLKGLCDEN-------------------RSQEALELLQMMPDDGGDCPP 197
Query: 256 S--DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N KE ++ G ++++RG +P + S +A+ C + E+L
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++++ G++ + +S++ YCS+ Q +AI K+ DV TY+ L+D L K+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
GR EA ++FD M K G KP+ TY
Sbjct: 318 GRCTEARKMFD----------------------------------SMTKRGLKPEITTYG 343
Query: 434 QVISGF 439
++ G+
Sbjct: 344 TLLQGY 349
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 168/422 (39%), Gaps = 46/422 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G + +++ M G P ++ LL + + L MVR+G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
+ PN + +S++ + GK + V + G+ +V Y VI K G A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M + R L+PG Y+S++ ++K
Sbjct: 430 RYFEQMIDER-LSPGNIVYNSLIHSLCIFDKW---------------------------- 460
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D K EM+ + C + I ++ + KEGRV E+ +++ L+ G+
Sbjct: 461 ----DKAKELILEMLDRGICLDTIFFNS-----IIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C + +E LL +V G P + + + C + ++ L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ G+ D + +++ R+ A L++ I + L+++TY+++L GL K
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 373 DGRMEEAVRIFDY--MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ +EA+R+F + +L+ + + +F I++ L + +A + G PD
Sbjct: 632 NNLTDEALRMFQNLCLTDLQ-LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 431 TY 432
TY
Sbjct: 691 TY 692
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 138/315 (43%), Gaps = 8/315 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+ +G + V+ MR G P ++ L + + A + M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+ +SP ++ + LC K+ E++L +LD GI ++ +N +ID + K+G
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ ++L ++ + P TYS+++DG K + + +++ MV + P +
Sbjct: 497 ES-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY--N 553
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + + A ++F+ + T +L+ L + R A ++Y I+E
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + S Y ++ LCK + +E + +++ + + + G+ E
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 310 EELLSAVLDKGLLLD 324
++L +A+ GL+ D
Sbjct: 674 KDLFAALSANGLVPD 688
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV P+ T+S + C +GK + LL S +
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V YN +I+ Y K A EM ++P TY+ IL G + +T
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + VG+ L LS + ++ L T A +F+ C ++L+ T
Sbjct: 602 AAKELYVGITESGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
M+ AL K GR EA ++ +S G+ V D Y+ +
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGL-VPDVRTYSLM 695
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI-KIEKL 354
+ S C G+ L V+ KG +D+ + L++ C++++ A+ + + ++ +L
Sbjct: 97 LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LKVVSSSSFVIVVSRLCHLK 408
+V +Y++LL GL + R +EA+ + M + VV S+ V++
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEG 213
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L KA + EML G P+ TY +I+
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 13/371 (3%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ ++ + L +G + + + D+ V YN++I Y
Sbjct: 209 WKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYC 268
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL---L 180
+ G A RL+EM LTP TY +++ V + M E+ + +
Sbjct: 269 RAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDI 328
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P+H VI L GK + +F+R ++ ++ K GR KEA+
Sbjct: 329 PQH---AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAM 385
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + G+ + Y VN LC+ + +E R E+G A+ + +
Sbjct: 386 ALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGF 445
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G + +EL ++ KG + DS+C + L++ + ++D A AL+ ++E V
Sbjct: 446 GKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTV 505
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY +L+DGLFK+ + EEA++ +D M + + ++++F + S LC + +A + DE
Sbjct: 506 YTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDE 565
Query: 420 MLKMGHKPDEA 430
+ MG P+ A
Sbjct: 566 LAPMGVIPETA 576
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D A LV+ G +G+ V+ M G + AL+D++ + + A
Sbjct: 325 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 384
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M G+ + T+ ++ LCR GK + + S + N +
Sbjct: 385 MALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIF------- 437
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
Y+S++DG + + S + M+ K +P +
Sbjct: 438 ------------------------YTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYC- 472
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ G+ A ++KR D+ + T ++ L KE + +EA++ + +
Sbjct: 473 -YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 531
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + + LC + C +L ++ G IP + C G++
Sbjct: 532 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAH-EDMINVLCKAGRF 590
Query: 307 KEVEELLSAVLDKG 320
K+ +L ++ KG
Sbjct: 591 KQACKLADGIVQKG 604
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 233 EGRVKEAIQIYHLISERGI--TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
EG I ++ + ERG+ + Y + LCK+ +P E + +++RG A
Sbjct: 306 EGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANA 365
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + S G+ KE L + D GL LDS ++ C ++D+A+A
Sbjct: 366 AIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRS 425
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
++ +++ Y L+DG K G ++++ +F+
Sbjct: 426 CQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE-------------------------- 459
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD Y +I G
Sbjct: 460 --------EMIAKGFVPDSYCYNVLIDGL 480
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G D +Y+ M G V L+D L+++++ A + AM+
Sbjct: 474 NVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMID 533
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G++P + +A LC SGKF +LD G+ + +I+ K G F A
Sbjct: 534 KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFKQA 593
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+ + PG + +++ R+ T+++ ++V
Sbjct: 594 CKLADGIVQKGREIPG-RVRTMMINALRKAGNTDLAVKLV 632
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 50/252 (19%)
Query: 2 IQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
+SC+ + +A+ + ++D + G+ E++ M GFVP N L+D L +
Sbjct: 423 FRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAK 482
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI 119
+ A LY M DG +T++++ L + K E L D+ +I
Sbjct: 483 SGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDA----------MI 532
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D + +TP + + ++ G K + RI+ + +
Sbjct: 533 D---------------------KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGV 571
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC-------DEKIELQDDTCGCMLKALSK 232
+P+ + ++ +I L G+ FK+AC + E+ M+ AL K
Sbjct: 572 IPE---TAHEDMINVLCKAGR-------FKQACKLADGIVQKGREIPGRVRTMMINALRK 621
Query: 233 EGRVKEAIQIYH 244
G A+++ H
Sbjct: 622 AGNTDLAVKLVH 633
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 219/485 (45%), Gaps = 71/485 (14%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMM-RVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+AL+ V+ Y+ G ++++ M+ +Y P V A N+LL+ L + ++ +A LY
Sbjct: 129 EALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYD 188
Query: 72 AMVRDG------VSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVID 120
M+ G + + ++ +V + LC GK E L+D + + V YN++ID
Sbjct: 189 KMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIID 248
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR------IVGLM 174
Y KKGD A R+ E + P TY +++DG + K +V D+ ++GL
Sbjct: 249 GYCKKGDLKRA-TRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLN 307
Query: 175 VEKKLLPKHFLSGNDY-VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
V K+ + Y ++ K ++M + M+ + C+ I T ++
Sbjct: 308 VNVKVFNSIIDAKYKYGLVDKAAEMMR-----MMTEMGCEPDIT----TYNILINFSCSG 358
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE-----------------HQPE---- 272
GR+KEA + ER + Y ++ CK+ +P+
Sbjct: 359 GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSY 418
Query: 273 -------------EVCGLLRD-VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+V ++R+ ++E+G P A + ++ C KG++ + LLS +LD
Sbjct: 419 GAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLD 478
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
L D++ ++L++ + N ++DKA L + V Y+V++ GL K G+M +
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTD 538
Query: 379 AVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
AV Y+ ++K+ + + + V+ +L A+K +M+K +KP+ Y
Sbjct: 539 AV---SYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTS 595
Query: 435 VISGF 439
+I+GF
Sbjct: 596 LINGF 600
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 151/381 (39%), Gaps = 42/381 (11%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L V M G P N L+ L ++ A L M+ + P+ + ++ +
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVD 493
Query: 91 ILCRSGK-------FEVVLGL-LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
R+ + FEVV+ +D G+ V YN++I K G A +N+M
Sbjct: 494 GFIRNNELDKATELFEVVMSKGIDPGV---VGYNVMIKGLCKCGKMTDAVSYVNKM-KIA 549
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-----HFLSGNDYVIQKLSD 197
N P T+S+++DG + + + ++ G M+++K P ++G K++D
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLING----FCKIAD 605
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
M + AE +F+ +E T ++ SK G+ ++A + L+ D+
Sbjct: 606 MSR---AEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTT 662
Query: 258 YYAFVNVLC------------KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
++ +N L +E+ + ++ G+ + + C G
Sbjct: 663 FHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGM 722
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT--- 362
+ L + +L KG L+DS C S+L+ C Q K+ I +D T
Sbjct: 723 VDTAQLLQTKMLRKGFLMDSVCFSALLHGLC---QTGKSKEWRNIISGDLTKIDFQTAFE 779
Query: 363 YDVLLDGLFKDGRMEEAVRIF 383
Y + LD DG+ EA I
Sbjct: 780 YSLKLDKYLYDGKPSEASYIL 800
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 192/436 (44%), Gaps = 32/436 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+++ ++ +G ++++ M YGFV ++ + L++ L +Q +I A L+ M
Sbjct: 282 TLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEM 341
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----YSSV--MYNLVIDFYSKKGD 127
GV+P+ V + CR G F V+ ++ SV +YN+V++ G+
Sbjct: 342 KSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGE 401
Query: 128 FGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV--GLMVEKKLLPKHF 184
AA+ L M C G+ + + + +L + S IV GL KKL
Sbjct: 402 VEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL----- 456
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
DM +MI C KI + +D ++ L R++E I++
Sbjct: 457 ------------DMALALTKDMI-SLGCKGKILMFND----LIHELCNMDRLEEGYGIFN 499
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + G+T + Y + +C+ P+ LLR++ G+ P + V C G
Sbjct: 500 QMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSG 559
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E + L +L G L D S+ M C+ ++D A+ L I DV ++
Sbjct: 560 RVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHN 619
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L++G K +++EA +I + M E + S ++ +++ C + KA+ D+M+
Sbjct: 620 ILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYE 679
Query: 424 GHKPDEATYKQVISGF 439
+P TY +I GF
Sbjct: 680 EKQPTVITYTSLIDGF 695
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLI-SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
G +L+ L G A++ + + G T Y ++ L K + ++ LR++V
Sbjct: 142 GFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMV 201
Query: 283 ER---GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
R G + L+ + C G+ + ++ + + G + D ++LM +
Sbjct: 202 ARCGDGSVD-KYTLTSLLRCYCNAGRPDDANDVFQRMSELGWV-DEHVLTTLMVAFSKWG 259
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFV 398
++D A+ L +E L L T VL+ G K GR+++A+ +F M VV + +
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC K++ +A+K EM G PD K+VI F
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAF 360
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 125/305 (40%), Gaps = 28/305 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G ++ M+ G P+ N+L + R+ + + A L M +G P + +
Sbjct: 493 EGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMV 552
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG-------- 141
Q LC SG+ + LD + + ++V + AA +N MCN
Sbjct: 553 QQLCFSGRVTEAVQFLDGMLQIGFLPDIVT--------YSAA---MNGMCNTGEVDDALH 601
Query: 142 --RNLT-----PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
R+++ P ++ +++G R+ K + + +I+ M+EK L P + + +I
Sbjct: 602 LFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPS--VVTYNLMIDV 659
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ A + E+ + T ++ GR EAI+++ + E+G
Sbjct: 660 CCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPN 719
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ Y AF+N L K + E ++V +G+ L F+ G + ELL
Sbjct: 720 NIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLK 779
Query: 315 AVLDK 319
VL K
Sbjct: 780 EVLQK 784
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 222 TCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDSDYYAFVNVL---CKEHQPEEVCGL 277
T C+L AL+K GR +A ++ +++ G D Y ++L C +P++ +
Sbjct: 176 TYNCLLDALAKAGRADDAQARLREMVARCGDG--SVDKYTLTSLLRCYCNAGRPDDANDV 233
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVE---ELLSAVLDKGLLLDSFCCSSLMEY 334
+ + E G++ + + VA KW +V+ ELL ++ G+ L S L+
Sbjct: 234 FQRMSELGWVDEHVLTTLMVAFS----KWGKVDGAVELLGSMEALGMRLSEKTLSVLVHG 289
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ ++DKA+ + K+ +D+A Y VL++GL + + AV++F MK V
Sbjct: 290 FTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAP 348
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 145/355 (40%), Gaps = 35/355 (9%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+S YN ++D +K G A RL EM C ++ T +S+L + + +
Sbjct: 173 NSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDK--YTLTSLLRCYCNAGRPDDA 230
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ + M E + +H L+ ++ S GK A + + L + T ++
Sbjct: 231 NDVFQRMSELGWVDEHVLT---TLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLV 287
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+K+GRV +A+ ++ + G V + Y + LC++ L +++ G
Sbjct: 288 HGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVA 347
Query: 288 PCAMELSRFVASQCGKGKWKEVEELL----------SAVLDKGLLLDSFC-CSSLMEYY- 335
P L + + + C +G + + + S V ++L+ C + Y
Sbjct: 348 PDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQ 407
Query: 336 ------CSNRQIDKAIA-----LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
C + ++ +A LHI+ E K + D ++++++ GL K +++ A+ +
Sbjct: 408 LLRSMVCGGQAVNNDVAGGAHMLHIR-EDAKPNSD--SFNIVVCGLCKVKKLDMALALTK 464
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M L F ++ LC++ L + ++M +G P E TY + G
Sbjct: 465 DMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 195/441 (44%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + S +++ +G + LE+ M G P + N L++ L + A
Sbjct: 251 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 310
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
L MV G PN T+ V ++C+SG+ + + LL + I +V Y+++ID
Sbjct: 311 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G AF+ NEM + +T TY+ ++ G + + +++ M+++K+ P
Sbjct: 371 LCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I GK AE + K I T ++ KE + +A Q
Sbjct: 430 N--VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 487
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ L+ +G + +N CK ++ ++ L R + RG + + + + C
Sbjct: 488 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 547
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK +EL ++ + + + L++ C N + +KA+ + KIEK K LD+
Sbjct: 548 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 607
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDE 419
Y++++ G+ ++++A +F + LK V ++ I++ LC L +A +
Sbjct: 608 IYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M + GH PD TY +I +
Sbjct: 667 MEEDGHAPDGWTYNILIRAHL 687
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 180/410 (43%), Gaps = 36/410 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + + M + G + + +++ R ++ LA G +++ G PN T+S +
Sbjct: 206 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 265
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
LC G+ L L+ DR+ EM + P T
Sbjct: 266 LCLEGRVSEALELV---------------------------DRMVEMGH----KPDLITI 294
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++++G K + ++ MVE P G V+ + G+T A + ++
Sbjct: 295 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP--VLNVMCKSGQTALAMELLRKM 352
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ I+L ++ L K G + A +++ + +GIT Y + C +
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LLRD+++R P + S + S +GK +E EEL ++ +G+ D+ +SL
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
++ +C +DKA + + + KG ++ T+++L++G K R+++ + +F M
Sbjct: 473 IDGFCKENHLDKANQM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV+ + ++ ++ C L +L A + EM+ P+ TYK ++ G
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 176/419 (42%), Gaps = 50/419 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++++R M +P V + L A+ + + L L M G++ N +T S++
Sbjct: 169 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 228
Query: 90 QILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAF---DRLNEMCNG 141
CR K + + I +++ ++ +I+ +G A DR+ EM +
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH- 287
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P T +++++G K + ++ MVE P G V+ + G+T
Sbjct: 288 ---KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP--VLNVMCKSGQT 342
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A + ++ + I+L ++ L K G + A +++ + +GIT Y
Sbjct: 343 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ C + ++ LLRD+++R P + S + S +GK +E EEL ++ +G+
Sbjct: 403 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 462
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAV 380
D+ +SL++ +C +DKA + + + KG ++ T+++L++G K R+++ +
Sbjct: 463 APDTITYTSLIDGFCKENHLDKANQM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521
Query: 381 RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F M VV+ D TY +I GF
Sbjct: 522 ELFRKMSLRGVVA----------------------------------DTVTYNTLIQGF 546
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 161/394 (40%), Gaps = 39/394 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL+ G +E+ R M + ++D L + + A L+ M G
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 391
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
++ N T++++ C +G+++ LL I + N+V ID + K+G A
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--------------- 177
+ EM + R + P TY+S++DG + + ++++V LMV K
Sbjct: 452 ELHKEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 510
Query: 178 -----------KLLPKHFLSG-------NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+L K L G + +IQ ++GK A+ +F+ K+
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L G ++A++I+ I + + + Y ++ +C + ++ L
Sbjct: 571 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 630
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ +G P + + C KG E E L + + G D + + L+ + +
Sbjct: 631 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 690
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
K++ L ++++ S+D +T +++D L D
Sbjct: 691 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 141/308 (45%), Gaps = 26/308 (8%)
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+L + NL+ F ++ LD ++ KTE DR L K+L K G +V
Sbjct: 49 QLKSIIASENLSSPFD-FNRFLDLMAKHLKTEPFDR--QLRDAFKVLDKE---GTGFV-- 100
Query: 194 KLSDMGK--TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS-ERG 250
++D+ T E + DE I+ D + +G+++ I +++ +R
Sbjct: 101 AVADLRHILTSIGEKLEPNEFDEWIKEVD---------VGSDGKIRYEDFIARMVANDRN 151
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
++ R+ V++ + ++ L RD++ +P ++ SR ++ ++ V
Sbjct: 152 LSYRERLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVL 206
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + KG+ + + S ++ +C R++ A + KI KL + T+ L++GL
Sbjct: 207 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL 266
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+GR+ EA+ + D M E+ + +V+ LC + +AM D+M++ G +P+
Sbjct: 267 CLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 326
Query: 430 ATYKQVIS 437
TY V++
Sbjct: 327 VTYGPVLN 334
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 181/400 (45%), Gaps = 46/400 (11%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
VS N L+ AL + +++R A + M G+SP++ T++ + Q G + L + +
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262
Query: 107 SGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+ + V N++I+ + K+G A + E + P TY+++++G +
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVS-EGFRPDQFTYNTLVNGLCKI 321
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ + +V M+ L P +
Sbjct: 322 GHAKHAMEVVDAMLLGGLDPDIY------------------------------------- 344
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L K G ++EA++I + R + Y A ++ LCKE++ +E + R +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G +P + + C K +L + KG D F + L++ CS+R++
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS--SSSFVI 399
++A+ L ++E + +V Y+ L+DG K+ R+EEA IFD M EL+ VS S ++
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM-ELQGVSRDSVTYNT 523
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC K + A + D+M+ G +PD+ TY +++ F
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF 563
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 190/442 (42%), Gaps = 15/442 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++ Y G L + M YG N L++ +Q I A
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA 292
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVV----LGLLDSGIYSSVMYNLV 118
V +G P++FT++ + LC+ G EVV LG LD IY+ YN +
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT---YNSL 349
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I K G+ A L++M + R+ +P TY++I+ + + + + I L+ K
Sbjct: 350 ISGLCKLGEIEEAVKILDQMVS-RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+LP + + +IQ L +A +F+ + + T ++ +L +++E
Sbjct: 409 ILPD--VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEE 466
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + + G Y ++ CK + EE + ++ +G ++ + +
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C + ++ +L+ ++ +GL D F +SL+ ++C I KA + + +
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP 586
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNH 417
D+ TY L+ GL K GR++ A R+ ++ + V++ ++ V+ L +AM+
Sbjct: 587 DIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF 646
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EML PD TYK V G
Sbjct: 647 REMLDKSEPPDAITYKIVYRGL 668
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 124/294 (42%), Gaps = 13/294 (4%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+ + +G+ + D + +++D + L + + M + G V N L+D
Sbjct: 435 LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFC 494
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV----- 113
+ I A ++ M GVS + T++ + LC+S + E L+D I +
Sbjct: 495 KNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKF 554
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV-G 172
YN ++ + K GD A D + M + P TY++++ G + + +V+ R++
Sbjct: 555 TYNSLLTHFCKTGDIKKAADIVQTMTSS-GCNPDIVTYATLISGLCKAGRVQVASRLLRS 613
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL-S 231
+ ++ +L H + VIQ L +T+ A +F+ D+ T + + L +
Sbjct: 614 IQMKGMVLTPH---AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCN 670
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
G + EA+ + ERG S + LC + + L+ ++E+
Sbjct: 671 GGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKA 724
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNH 417
D Y+VLL+ L +++ M ++ S+F I++ LC ++R A+
Sbjct: 167 DTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMM 226
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
+EM G PDE T+ ++ G++
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYI 249
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 174/405 (42%), Gaps = 9/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + L+ L + +I A L+ M+ +G PN T+ + LC+ G
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LL S + V+++ +ID K AF+ +EM + ++P TY+S++
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT-KGISPNIVTYNSLIH 253
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + ++ MV+ K++P F + V+ L G A + +
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTL--NTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
E T ++ V A++++ + + Y +N CK ++
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++ + P + + + C G+ ++ L ++ +G + D +L +Y C
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
NR +DKA+AL IE D+ Y +LDG+ + G +E+A +F + + +
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 491
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ I++ LC L +A K EM K G P++ TY + GF+
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 167/364 (45%), Gaps = 11/364 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R M P V + L+D+L + ++ A ++ M+ G+SPN T++ +
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC+ +++ V L++ + S +M N V+D K+G A D ++ M + R +
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH-RGVE 312
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++DG + +V+ ++ MV K + + +S N +I + A
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV-ANVISYNT-LINGYCKIQSVDKAM 370
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F+ +++ T ++ L GR+++AI ++H + RG Y + L
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK ++ LL+ + + P + + C G+ ++ +L S + KGL +
Sbjct: 431 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ + ++ C + +A L ++ K S + TY+++ G ++ EA+R +
Sbjct: 491 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN---EALRTIEL 547
Query: 386 MKEL 389
++E+
Sbjct: 548 LEEM 551
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 174/405 (42%), Gaps = 9/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + L+ L + +I A L+ M+ +G PN T+ + LC+ G
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LL S + V+++ +ID K AF+ +EM + ++P TY+S++
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT-KGISPNIVTYNSLIH 253
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + ++ MV+ K++P F + V+ L G A + +
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTL--NTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
E T ++ V A++++ + + Y +N CK ++
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++ + P + + + C G+ ++ L ++ +G + D +L +Y C
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
NR +DKA+AL IE D+ Y +LDG+ + G +E+A +F + + +
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 491
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ I++ LC L +A K EM K G P++ TY + GF+
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 167/364 (45%), Gaps = 11/364 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R M P V + L+D+L + ++ A ++ M+ G+SPN T++ +
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC+ +++ V L++ + S +M N V+D K+G A D ++ M + R +
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH-RGVE 312
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++DG + +V+ ++ MV K + + +S N +I + A
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV-ANVISYNT-LINGYCKIQSVDKAM 370
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F+ +++ T ++ L GR+++AI ++H + RG Y + L
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK ++ LL+ + + P + + C G+ ++ +L S + KGL +
Sbjct: 431 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ + ++ C + +A L ++ K S + TY+++ G ++ EA+R +
Sbjct: 491 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN---NEALRTIEL 547
Query: 386 MKEL 389
++E+
Sbjct: 548 LEEM 551
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 187/433 (43%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P + L+ L + +I A L+ M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G PN T+ + LC+ G + LL S + V+Y +ID K
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ ++M G+ ++P TY+S++ + + ++ MV K+LP +
Sbjct: 222 TEAFNLFSQMV-GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 280
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L GK A I +E T ++ + + EA++++ ++
Sbjct: 281 --VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK H+ ++ L ++ + +IP + + C G+ ++
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ +G + D S L++ C NR +++A+AL IE + D+ Y++++D
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A +F + + S ++ I++ LC L +A K EM P
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518
Query: 428 DEATYKQVISGFM 440
D TY + GF+
Sbjct: 519 DGCTYNTIARGFL 531
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 163/361 (45%), Gaps = 8/361 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +++D+L + ++ A L+ MV G+SP+ FT++ + LC +++ V L
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262
Query: 105 LDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + S V+++ V+D K+G A + ++ M R + P TY++++DG
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ-RGVEPDVVTYTTLMDGHC 321
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++ +MV K P + +I + K A +F+ C ++
Sbjct: 322 LQSEMDEAVKVFDMMVRKGFAPD--VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 379
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L GR+++AI ++H + RG Y ++ LCK EE LL+
Sbjct: 380 TKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLK 439
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ P + + C G+ + +L S + KGL + + ++ C
Sbjct: 440 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRG 499
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+++A L ++++ S D TY+ + G ++ A+++ + M + S F++
Sbjct: 500 LLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLM 559
Query: 400 V 400
+
Sbjct: 560 L 560
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
D+ + + K V L + G P L+ + S C + +L+ +
Sbjct: 67 DFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 126
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
L G D ++L+ C +I +A+ L K+ +V TY L++GL K G
Sbjct: 127 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 186
Query: 377 EEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
A+R+ M+ + VV +S ++ LC +++ +A +M+ G PD TY
Sbjct: 187 SAAIRLLRSMEQGNCQPDVVIYTS---IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 243
Query: 433 KQVI 436
++
Sbjct: 244 TSLV 247
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 190/430 (44%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+ ++C+ + L V M G+ P + ++LL+ I A L MV
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ FT++ + L K + L+D + V Y V++ K+GD
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M G+ + Y++I+DG +Y+ + + + M K + P F +
Sbjct: 242 ALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS-- 298
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + + KI T ++ A KEG++ EA ++Y + +R
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + ++ + P + S + C + +E
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ ++ ++L+ + R D A + ++ + ++ TY++LLDGL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G++ +A+ +F+Y++ + ++ I++ +C ++ + + G P+
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 430 ATYKQVISGF 439
Y +ISGF
Sbjct: 539 IAYNTMISGF 548
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 177/407 (43%), Gaps = 21/407 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ N LL A+ + N+ L L M G+S + +T+S+ CR + + L +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 105 L----------DSGIYSSVMYNLVIDFYSKK-GDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
L D SS++ +SK+ D A D++ EM P T+++
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYC---HSKRISDAVALVDQMVEM----GYKPDTFTFTT 193
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++ G + K + +V MV++ P G V+ L G A + K+
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT--VVNGLCKRGDIDLALSLLKKMEK 251
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
KIE ++ L K + +A+ ++ + +GI Y + ++ LC + +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
LL D++ER P + S + + +GK E E+L ++ + + D F SSL+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+C + ++D+A + + +V TY L+ G K R+EE + +F M + +V
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ ++ ++ A +M+ +G P+ TY ++ G
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 164/381 (43%), Gaps = 17/381 (4%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYS 123
L+G MV+ P+ ++ + + + KFE+V+ L + GI + Y++ I+ +
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++ A L +M P T SS+L+G ++ + +V MVE P
Sbjct: 130 RRSQLSLALAVLAKMMK-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 184 FLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
F +I L K A + + +R C + T G ++ L K G + A
Sbjct: 189 FTFTT--LIHGLFLHNKASEAVALVDQMVQRGCQPDLV----TYGTVVNGLCKRGDIDLA 242
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + + I Y ++ LCK ++ L ++ +G P S ++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+W + LLS ++++ + + S+L++ + ++ +A L+ ++ K D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
+ TY L++G R++EA +F+ M + ++ ++ C K + + M+
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 419 EMLKMGHKPDEATYKQVISGF 439
EM + G + TY +I GF
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGF 443
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 181/475 (38%), Gaps = 78/475 (16%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
V+ G P+ T+ V LC+ G ++ L LL + G + V+YN +ID K
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM N + + P TYSS++ Y + + R++ M+E+K+ P +
Sbjct: 275 DDALNLFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN--VVTF 331
Query: 189 DYVIQKLSDMGKTYAAEMIF----KRACDEKI----ELQDDTC----------------- 223
+I GK AE ++ KR+ D I L + C
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 224 ----------GCMLKALSKEGRVKEAIQIYHLISERGIT---------------VRDSD- 257
++K K RV+E ++++ +S+RG+ RD D
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 258 -------------------YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
Y ++ LCK + + + + P + +
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK ++ EL + KG+ + ++++ +C ++A +L K+++
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKA 413
+ TY+ L+ +DG E + + M+ +S + +V+ + H L K+
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 248 ERGITVRDSDYYAFV-NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
ER DY + N L + ++ L D+V+ P +E ++ +++ K+
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ V L + G+ D + S + +C Q+ A+A+ K+ KL D+ T L
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L+G R+ +AV + D M E+ + +F ++ L + +A+ D+M++ G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 426 KPDEATYKQVISGF 439
+PD TY V++G
Sbjct: 220 QPDLVTYGTVVNGL 233
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 186/411 (45%), Gaps = 14/411 (3%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV-RDGVSPNKFTWSLVAQILCR 94
++ R +G P+ + N +L L R + A LY MV RD V P FT+ + A+ LCR
Sbjct: 128 QLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCR 187
Query: 95 SGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G+ L LL + +V+Y VI +G A LNEM +
Sbjct: 188 LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL-MGCAADVN 246
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
T+ ++ G + + R+V M+ K +P G +++Q L + + A +
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYG--FLLQGLCRVRQADEARAMLG 304
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R + + L + G L EG++ EA ++Y + +G Y ++ LCK
Sbjct: 305 RVPELNVVLFNTVIGGCLA----EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ LLR++ ++G+ P + + + S C G W + LL + KGL L+S +
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++ C + ++D+A+ L ++ + D+ +Y+ ++ L + +MEEA +F+ + E
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV++ ++ ++ L + A++ EM+ G D +Y +I
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 8/328 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + E+Y M + G P + L+ L + I A L M + G +PN T
Sbjct: 324 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVT 383
Query: 85 WSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++V C++G ++ LL+ G+ +S YN +I K G A + EM
Sbjct: 384 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM- 442
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P +Y++I+ E+ E ++ + ++E+ ++ + +I L G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY--NTIIHALLRDG 500
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A + K L + ++KA+ K+G V ++ + ++E+GI + Y
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYN 560
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ LCKE + + L + ++ +G P + + + C G LL + ++
Sbjct: 561 ILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+ D + L+ ++C R +D A L
Sbjct: 621 NVHPDIITYNILISWHCKVRLLDDAAML 648
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 157/350 (44%), Gaps = 10/350 (2%)
Query: 42 GFVPAVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
G VP ++ N ++ + ++ A+ LY M G P+ T+S++ LC+ G+
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIS 363
Query: 100 VVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+ LL G +V+ Y +V+ + K G + L EM + + LT Y+ +
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM-SAKGLTLNSQGYNGM 422
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ + + + + ++ M + P + + +I L + + AE +F+ +E
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPD--ICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T ++ AL ++GR ++A+++ + G ++ Y + +CK+ +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
LL ++ E+G P + + ++ C + + ++ EL +L++GL D ++L+
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
C + A+ L K+ D+ TY++L+ K +++A + +
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 650
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + ++ G + D + + + M ++G V + N L+ A+ + +
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVID 120
+ L M G+ PN +++++ LC+ + E+ +L+ G+ V YN +I+
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
K G AA + L ++ N N+ P TY+ ++
Sbjct: 600 GLCKMGWMHAALNLLEKLHN-ENVHPDIITYNILI 633
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 207/461 (44%), Gaps = 46/461 (9%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMM-RVYGFVPAVSACNALLDALYRQNEI 63
C+ +ALS V+ Y GL LE+Y + ++ ++P V ACNALL+AL +Q ++
Sbjct: 127 CKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKV 186
Query: 64 RLASCLYGAMV-RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNL 117
+A +Y MV RDG N ++ ++ + LC+ K E L++ I + V YN
Sbjct: 187 EIARKVYEEMVKRDGCWDN-YSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNT 245
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++D Y K+GD A E+ + P TY +++G + + D GL+VE
Sbjct: 246 LVDGYWKRGDVERANGLFKEL-KMKGFLPTTETYGIMINGLCKKCNFKAVD---GLLVEM 301
Query: 178 KLLPKHFLSGNDYVIQKLSD----------MGKTYAAEMIFKRACDEKIELQDDTCGCML 227
K + + N V + D +GKT I + C+ I T ++
Sbjct: 302 K---ERGVDVNVQVYNSIVDAQIKHGCKIEVGKTL--RWITENGCEPDIT----TYNTLI 352
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
++G+V EA ++ +RG++ Y ++V CK+ + L + E+G+
Sbjct: 353 SGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGH- 411
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSA---VLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
++L + A G EV+ L+ ++++G+L D+ + LM C ++ A
Sbjct: 412 --PLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAA 469
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV---- 400
L +++ SLD L+DG + G+++EA ++F EL + +V
Sbjct: 470 KLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLF----ELTIAKGMDPGVVGYNA 525
Query: 401 -VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ C + A+ M H PDE TY +I G++
Sbjct: 526 MIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYV 566
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 179/442 (40%), Gaps = 50/442 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P + N L+D +++ ++ A+ L+ + G P T+ ++ LC+ F+ V
Sbjct: 235 GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAV 294
Query: 102 LGLL----DSGIYSSV-MYNLVIDFYSKKG---DFGAAFDRLNEMCNGRNLTPGFSTYSS 153
GLL + G+ +V +YN ++D K G + G + E NG P +TY++
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITE--NG--CEPDITTYNT 350
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++ G+ R K ++ ++ +++ L P +I GK A +F +
Sbjct: 351 LISGSCRDGKVHEAEELLEHAIKRGLSPNKL--SYTPLIHVYCKQGKCLRAFDLFIGMTE 408
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE----- 268
+ L G ++ L G V A+ + + ERG+ + Y +N LCK+
Sbjct: 409 KGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSA 468
Query: 269 ---------HQP---------------------EEVCGLLRDVVERGYIPCAMELSRFVA 298
HQ +E L + +G P + + +
Sbjct: 469 AKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIK 528
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G + + + D D F S++++ Y + A+ L ++ K K
Sbjct: 529 GYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKP 588
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNH 417
+V TY L++G + G A + F+ M+ + + ++ I++ C ++ KA
Sbjct: 589 NVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFF 648
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+ ML P++ T+ +I+G
Sbjct: 649 ELMLLNRCIPNDVTFNYLINGL 670
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/456 (17%), Positives = 186/456 (40%), Gaps = 29/456 (6%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + ++D G ++ + R + G P ++ N L+ R ++ A
Sbjct: 305 GVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEA 364
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG-IYSSVMYNLVIDF 121
L ++ G+SPNK +++ + + C+ GK F++ +G+ + G V Y ++
Sbjct: 365 EELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHG 424
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G+ A ++M R + P + Y+ +++G + + + ++ M+ + L
Sbjct: 425 LVAAGEVDVALTVRDKMVE-RGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSL 483
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
F+S ++ GK A+ +F+ + ++ M+K K G + +A+
Sbjct: 484 DAFVSAT--LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALT 541
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + + + Y ++ K++ L +V++ P + + + C
Sbjct: 542 CVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFC 601
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G E+ + GL + + L+ +C +I KA + + + +
Sbjct: 602 RTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDV 661
Query: 362 TYDVLLDGLFKD------GRMEEAVRI-----FDYMK-------ELKVVSSSSFVIVVSR 403
T++ L++GL + + E++ I D+ + E +V + +S +I
Sbjct: 662 TFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLIC--- 718
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LCH K + A++ D+M G PD ++ ++ G
Sbjct: 719 LCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGL 754
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++ Y G+ D L + M+ P + ++D +QN++
Sbjct: 514 KGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHN 573
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSG-------KFEVVLGLLDSGIYSSVM-YNL 117
A L+G MV+ PN T++ + CR+G FE + SG+ +V+ Y +
Sbjct: 574 ALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFE---EMRSSGLKPNVVTYTI 630
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
+I + K+G A M R + P T++ +++G T VS++
Sbjct: 631 LIGCFCKEGKISKACSFFELMLLNRCI-PNDVTFNYLINGLTNNLATAVSNK 681
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 192/407 (47%), Gaps = 13/407 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG--VSPNKFTWSLVAQILCRSGKFE 99
G P++ CN L++AL ++ LA ++G M RDG V+P+ +T++++ + LCR+G+ +
Sbjct: 175 GASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPDVYTYTVMIKALCRAGEID 233
Query: 100 VVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+L SGI +V+ YN+++D + G AF M GR L P T+ +
Sbjct: 234 AAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR-LRPSIVTFGIL 292
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
++G R ++ D ++ M + P + + +I G A +F +
Sbjct: 293 INGLARGQRFGEVDAVLQEMEGFGITPNEVIY--NQLIGWHCREGHCSEALRLFDEMVSK 350
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV-LCKEHQPEE 273
I+ T + KAL KEG ++ A QI + G+TV S + + V L + +
Sbjct: 351 GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDV 410
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
V L+R++V R P ++ + C +GK +E E+ VL KGL ++ ++L+
Sbjct: 411 VLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIH 470
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + +A + + D TY++++ K +MEEA+++ D M +
Sbjct: 471 GLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKP 530
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F + C+L ++ + D+M G KPD TY +I G+
Sbjct: 531 DLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 177/410 (43%), Gaps = 26/410 (6%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ L++ L R + M G++PN+ ++ + CR G L L
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343
Query: 105 LDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA- 158
D GI +V+ YNL+ K+G+ A L+EM L G + + S+ +
Sbjct: 344 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM-----LLAGMTVHCSLFNSVV 398
Query: 159 ----RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV----IQKLSDMGKTYAAEMIFKR 210
R + +V R++ MV + FL ND V IQ+L GK A I+
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVAR------FLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + + T ++ L + +KEA ++ + + G+ Y + CK +
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK 512
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
EE L D+++RG+ P + F+ + C GK +++ LL + +GL D +
Sbjct: 513 MEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGT 572
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+++ YC + + KA I++ K + Y+ L+ G ++G + +A+ + D MK
Sbjct: 573 IIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNG 632
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ +CH + +A + + + + Y +I GF
Sbjct: 633 IQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGF 682
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 176/410 (42%), Gaps = 26/410 (6%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----- 99
P V ++ AL R EI A + + R G+ P T++++ LCRSG+ E
Sbjct: 214 PDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQL 273
Query: 100 ---VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+V G L I V + ++I+ ++ FG L EM G +TP Y+ ++
Sbjct: 274 KGRMVEGRLRPSI---VTFGILINGLARGQRFGEVDAVLQEM-EGFGITPNEVIYNQLIG 329
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
R + R+ MV K + K + + + + L G+ AE I DE +
Sbjct: 330 WHCREGHCSEALRLFDEMVSKGI--KQTVVTYNLIAKALCKEGEMEHAEQIL----DEML 383
Query: 217 ELQDDTCGCML------KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
L T C L L GR+ +++ + R + D+ A + LCK +
Sbjct: 384 -LAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGK 442
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
EE + V+ +G + + C KE ++L A++D G+ D +
Sbjct: 443 HEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNI 502
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
++++ C ++++AI L + K D+ T++ L G++E+ + + D MK
Sbjct: 503 MIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ C K++ KA K E++K G +P+ Y +I G+
Sbjct: 563 LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGY 612
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 176/447 (39%), Gaps = 45/447 (10%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V + M +G P N L+ R+ A L+ MV G+ T++L+A+ LC
Sbjct: 308 VLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALC 367
Query: 94 RSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSK-KGDFGAAFDRLNEMCNGRNLTPG 147
+ G+ E +LD + + + ++N V+ ++ + G + EM R L P
Sbjct: 368 KEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMV-ARFLKPN 426
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+ ++ + + K E + I L++ K L ++ ++ +I L A +
Sbjct: 427 DAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN--IATSNALIHGLCQGNNMKEATKV 484
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K D +E T M++ K +++EAIQ+ + +RG + F+ C
Sbjct: 485 LKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCN 544
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ E++ LL + G P + + C + + L ++ GL ++
Sbjct: 545 LGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVI 604
Query: 328 CSSLMEYYCSNRQIDKAIAL-----HIKIEK----------------------------- 353
++L+ Y N I AI + H I+
Sbjct: 605 YNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCI 664
Query: 354 LKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
LK L V Y +++ G K G+++EAV F M + + ++ ++ C
Sbjct: 665 LKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKE 724
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISG 438
+A K DEM+ G PD +Y +ISG
Sbjct: 725 EAFKLFDEMVSSGIVPDTVSYNTLISG 751
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 10/235 (4%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGD 127
M++ G P+ FT++ + C GK E +L LLD G+ V Y +ID Y K D
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582
Query: 128 FGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A L E+ NG L P Y++++ G R + ++ M + P
Sbjct: 583 VHKANKYLIELIKNG--LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITY 640
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ + G A+ IF + + IEL +++ K G++ EA+ + +
Sbjct: 641 NS--LMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
R I Y + CK EE L ++V G +P + + ++ C
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 10/232 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
GF P + N L A ++ L M +G+ P+ T+ + C++
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586
Query: 99 -EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSIL 155
+ ++ L+ +G+ ++V+YN +I Y + G A L+ M NG TP TY+S++
Sbjct: 587 NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP--ITYNSLM 644
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
E + I + K + + + G +IQ +GK A M FK
Sbjct: 645 YWMCHAGLVEEAKEIFAQCILKNI--ELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRD 702
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
I T ++ A K G +EA +++ + GI Y ++ C+
Sbjct: 703 IRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCE 754
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 187/415 (45%), Gaps = 12/415 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V+ ++ G P+ + CN LL +L R E + C +V GVSP+ + ++
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQ-KCCEAFHVVCKGVSPDVYLFTTAIN 260
Query: 91 ILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ GK E + L ++G+ +V+ YN VID G + AF +M R +
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVE-RGVE 319
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS ++ G + ++ + ++ M EK P + N +I L + G A
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN--LIDSLIEAGSLNKAI 377
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I + + L T ++K K G+ A ++ + G V + + + +L
Sbjct: 378 EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLL 437
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C H + + +++ R P L+ ++ C GK + EL L+KG L+D+
Sbjct: 438 CSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDT 497
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ C ++++ + +I +D +Y+ L+ G + +++EA D
Sbjct: 498 KTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDE 557
Query: 386 M--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M K LK + ++ I++ L ++ ++ +A++ + + G PD TY +I G
Sbjct: 558 MVKKGLK-PDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG 611
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 196/448 (43%), Gaps = 25/448 (5%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + ++ + G + +E++ M G VP V N ++D L
Sbjct: 245 CKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYD 304
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVI 119
A MV GV P T+S++ + L ++ + + V+ + + G +V+ YN +I
Sbjct: 305 EAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLI 364
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D + G A + + ++ + L+ STY++++ G + + ++++R++ K++
Sbjct: 365 DSLIEAGSLNKAIE-IKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLL-----KEM 418
Query: 180 LPKHFLSGNDYVI--------QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
L F + D + EM+ + + ++ L
Sbjct: 419 LSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLR-----NMSPGGGLLTTLISGLC 473
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K G+ +A++++ +G V A ++ LC+ + EE + ++++ RG++ +
Sbjct: 474 KHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRV 533
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ ++ CG K E + ++ KGL D++ S L+ + ++++AI
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
++ DV TY V++DG K R EE ++FD M + ++ + ++ C L
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL 653
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISG 438
A++ ++M G P+ ATY +I G
Sbjct: 654 SMALELREDMKHKGISPNSATYTSLIKG 681
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 189/454 (41%), Gaps = 48/454 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D V + M GF P V N L+D+L + A + MV G+S T++ +
Sbjct: 340 DAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 399
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNL-------VIDFYSKKGDFGAAFDRLNEMCNGR 142
+ C+SG+ ++ LL + S+ +N+ VI F +A + EM R
Sbjct: 400 KGYCKSGQADIAERLLKEML--SIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLL-R 456
Query: 143 NLTPGFSTYSSILDGARRYEK-------------------TEVSDRIV-----------G 172
N++PG ++++ G ++ K T+ S+ ++ G
Sbjct: 457 NMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEG 516
Query: 173 LMVEKKLLPKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
++K++L + F+ + +I K A M + ++ + T +++
Sbjct: 517 FRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRG 576
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L +V+EAIQ + G+ Y ++ CK + EE L +++ P
Sbjct: 577 LLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPN 636
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-- 347
+ + + + C G+ EL + KG+ +S +SL++ ++++A L
Sbjct: 637 TVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLE 696
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCH 406
+++E L+ +V Y L+DG K G+M + + M V + ++ +++
Sbjct: 697 EMRMEGLEP--NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 754
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +A + EM + G PD TYK+ I G++
Sbjct: 755 DGNVTEASRLLHEMREKGIVPDSITYKEFIYGYL 788
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 186/433 (42%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P + L+ L + +I A L+ M
Sbjct: 93 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G PN T+ + LC+ G + LL S + V+Y +ID K
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ ++M G+ ++P TY+S++ + + ++ MV K+LP +
Sbjct: 213 TEAFNLFSQMV-GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L GK A I +E T ++ + + EA++++ ++
Sbjct: 272 --VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK H+ ++ L ++ + +IP + + C G+ ++
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ +G + D S L++ C N +++A+AL IE + D+ Y++++D
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A +F + + S ++ I++ LC L +A K EM P
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509
Query: 428 DEATYKQVISGFM 440
D TY + GF+
Sbjct: 510 DGCTYNTIARGFL 522
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 161/361 (44%), Gaps = 8/361 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R M P V +++D+L + ++ A L+ MV G+SP+ FT++ +
Sbjct: 180 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 239
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC +++ V LL+ + S V+++ V+D K+G A + ++ M R +
Sbjct: 240 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ-RGVE 298
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++DG + + + ++ +MV K P + +I + K A
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD--VISYTTLINGYCKIHKIDKAM 356
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F+ C ++ T ++ L GR+++AI ++H + RG Y ++ L
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK EE LL+ + P + + C G+ + +L S + KGL
Sbjct: 417 CKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ + ++ C +++A L ++++ S D TY+ + G ++ A+++ +
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 536
Query: 386 M 386
M
Sbjct: 537 M 537
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
D+ + + K V L + G P L+ + S C + +L+ +
Sbjct: 58 DFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 117
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
L G D ++L+ C +I +A+ L K+ +V TY L++GL K G
Sbjct: 118 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 177
Query: 377 EEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
A+R+ M+ + VV +S ++ LC +++ +A +M+ G PD TY
Sbjct: 178 SAAIRLLRSMEQGNCQPDVVIYTS---IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 234
Query: 433 KQVI 436
++
Sbjct: 235 TSLV 238
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 13/371 (3%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ ++ + L +G + + + D+ V YN++I Y
Sbjct: 255 WKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYC 314
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL---L 180
+ G A RL+EM LTP TY +++ V + M E+ + +
Sbjct: 315 RAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDI 374
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P+H VI L GK + +F+R ++ ++ K GR KEA+
Sbjct: 375 PQHAYV---LVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAM 431
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + G+ + Y VN LC+ + +E R E+G A+ + +
Sbjct: 432 ALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGF 491
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G + +EL ++ KG + DS+C + L++ + ++D A AL+ ++E V
Sbjct: 492 GKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTV 551
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY +L+DGLFK+ + EEA++ +D M + + ++++F + S LC + +A + DE
Sbjct: 552 YTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDE 611
Query: 420 MLKMGHKPDEA 430
+ MG P+ A
Sbjct: 612 LAPMGVIPETA 622
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 110/282 (39%), Gaps = 33/282 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D A LV+ G +G+ V+ M G + AL+D++ + + A
Sbjct: 371 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 430
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M G+ + T+ ++ LCR GK + + S + N +
Sbjct: 431 MALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIF------- 483
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
Y+S++DG + + S + M+ K +P +
Sbjct: 484 ------------------------YTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYC- 518
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ G+ A ++KR D+ + T ++ L KE + +EA++ + +
Sbjct: 519 -YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 577
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
++GIT + + + LC + C +L ++ G IP
Sbjct: 578 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIP 619
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 233 EGRVKEAIQIYHLISERGIT--VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
EG I ++ + ERG+ + Y + LCK+ +P E + +++RG A
Sbjct: 352 EGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANA 411
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + S G+ KE L + D GL LDS ++ C ++D+A+A
Sbjct: 412 AIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRS 471
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
++ +++ Y L+DG K G ++++ +F+
Sbjct: 472 CQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE-------------------------- 505
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
EM+ G PD Y +I G
Sbjct: 506 --------EMIAKGFVPDSYCYNVLIDGL 526
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G D +Y+ M G V L+D L+++++ A + AM+
Sbjct: 520 NVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMID 579
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G++P + +A LC SGKF +LD G+ + +I+ K G F A
Sbjct: 580 KGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFKQA 639
Query: 132 FDRLNEMCNGRN 143
+ +C R
Sbjct: 640 CKLADGICTERT 651
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 192/468 (41%), Gaps = 85/468 (18%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+LVL+ +G + L + R + +G P V + NA+L L L MVR
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
PN T++ + LCR+G FE V+ +++ G + MY +ID K+G
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 315
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + LN M L P Y+++L G A R+E+TE +LL + F
Sbjct: 316 AHEILNRM-PSYGLKPNVVCYNTLLKGLCSAERWEETE------------ELLAEMF--- 359
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
D+ L D T ++ + G V I++ +
Sbjct: 360 -------------------------DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
ERG Y +N CKE +E LL+ + G P + + + C +W
Sbjct: 395 ERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ E+L+S ++ +G L+ ++L+ + C +++AI L ++ S D+ +Y ++
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514
Query: 368 DGLFKDGRMEEA-----------------------------------VRIFDYMKELKVV 392
DGL K G+ +EA +++FD +++ +
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIR 574
Query: 393 SSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S + + V+S LC E +A++ M+ G P+E+TY +I G
Sbjct: 575 SDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M G +P V +++ ++ I A L +M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
G PN ++++V + LC + ++ L+ I + + +N +I+F KKG
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KT+ + ++ +MV K + P +
Sbjct: 489 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII-- 544
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ + ALS+EGR+ + IQ++ I
Sbjct: 545 --------------YSS---------------------IASALSREGRINKVIQMFDNIQ 569
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + E L +V G +P + + +G K
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 629
Query: 308 EVEELLSAVLDKGLL 322
E +E+L+ + KG L
Sbjct: 630 EAQEMLTELCSKGAL 644
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L+A + G + A+++ + RG + + +N +C + +E LLRD+ G
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 222
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +W V+EL+ ++ + ++L+ Y C N ++
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE-------------LKVV 392
+ ++ + + D+ Y ++DG+ K+G +E A I + M LK +
Sbjct: 283 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 342
Query: 393 SSS-----------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
S+ +F I+V C + + ++ ++ML+ G PD
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV 402
Query: 430 ATYKQVISGF 439
TY VI+GF
Sbjct: 403 ITYTTVINGF 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y+ V LC + + +L ++ RG P + + C G ++ +L +
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+G LD C+ ++ C +D+A+ L + DV +Y+ +L GL R
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + M + + +F ++S LC + + +M++ G PD Y +I
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304
Query: 437 SGF 439
G
Sbjct: 305 DGI 307
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 192/436 (44%), Gaps = 32/436 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+++ ++ +G ++++ M YGFV ++ + L++ L +Q +I A L+ M
Sbjct: 282 TLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEM 341
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----YSSV--MYNLVIDFYSKKGD 127
GV+P+ V + CR G F V+ ++ SV +YN+V++ G+
Sbjct: 342 KSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGE 401
Query: 128 FGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV--GLMVEKKLLPKHF 184
AA+ L M C G+ + + + +L + S IV GL KKL
Sbjct: 402 VEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL----- 456
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
DM +MI C KI + +D ++ L R++E I++
Sbjct: 457 ------------DMALALTKDMI-SLGCKGKILMFND----LIHELCNMDRLEEGYGIFN 499
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + G+T + Y + +C+ P+ LLR++ G+ P + V C G
Sbjct: 500 QMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSG 559
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E + L +L G L D S+ M C+ ++D A+ L I DV ++
Sbjct: 560 RVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHN 619
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L++G K +++EA +I + M E + S ++ +++ C + KA+ D+M+
Sbjct: 620 ILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYE 679
Query: 424 GHKPDEATYKQVISGF 439
+P TY +I GF
Sbjct: 680 EKQPTVITYTSLIDGF 695
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLI-SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
G +L+ L G A++ + + G T Y ++ L K + ++ LR++V
Sbjct: 142 GFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMV 201
Query: 283 ER---GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
R G + L+ + C G+ + ++ + + G + D ++LM +
Sbjct: 202 ARCGDGSVD-KYTLTSLLRCYCNAGRPDDANDVFQRMSELGWV-DEHVLTTLMVAFSKWG 259
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFV 398
++D A+ L +E L L T VL+ G K GR+++A+ +F M VV + +
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC K++ +A+K EM G PD K+VI F
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAF 360
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 124/305 (40%), Gaps = 28/305 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G ++ M+ G P+ N+L + R+ + A L M +G P + +
Sbjct: 493 EGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMV 552
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG-------- 141
Q LC SG+ + LD + + ++V + AA +N MCN
Sbjct: 553 QQLCFSGRVTEAVQFLDGMLQIGFLPDIVT--------YSAA---MNGMCNTGEVDDALH 601
Query: 142 --RNLT-----PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
R+++ P ++ +++G R+ K + + +I+ M+EK L P + + +I
Sbjct: 602 LFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPS--VVTYNLMIDV 659
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ A + E+ + T ++ GR EAI+++ + E+G
Sbjct: 660 CCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPN 719
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ Y AF+N L K + E ++V +G+ L F+ G + ELL
Sbjct: 720 NIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGHPMKGCELLK 779
Query: 315 AVLDK 319
VL K
Sbjct: 780 EVLQK 784
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 222 TCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDSDYYAFVNVL---CKEHQPEEVCGL 277
T C+L AL+K GR +A ++ +++ G D Y ++L C +P++ +
Sbjct: 176 TYNCLLDALAKAGRADDAQARLREMVARCGDG--SVDKYTLTSLLRCYCNAGRPDDANDV 233
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVE---ELLSAVLDKGLLLDSFCCSSLMEY 334
+ + E G++ + + VA KW +V+ ELL ++ G+ L S L+
Sbjct: 234 FQRMSELGWVDEHVLTTLMVAFS----KWGKVDGAVELLGSMEALGMRLSEKTLSVLVHG 289
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ ++DKA+ + K+ +D+A Y VL++GL + + AV++F MK V
Sbjct: 290 FTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAP 348
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 145/355 (40%), Gaps = 35/355 (9%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+S YN ++D +K G A RL EM C ++ T +S+L + + +
Sbjct: 173 NSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDK--YTLTSLLRCYCNAGRPDDA 230
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ + M E + +H L+ ++ S GK A + + L + T ++
Sbjct: 231 NDVFQRMSELGWVDEHVLT---TLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLV 287
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+K+GRV +A+ ++ + G V + Y + LC++ L +++ G
Sbjct: 288 HGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVA 347
Query: 288 PCAMELSRFVASQCGKGKWKEVEELL----------SAVLDKGLLLDSFC-CSSLMEYY- 335
P L + + + C +G + + + S V ++L+ C + Y
Sbjct: 348 PDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQ 407
Query: 336 ------CSNRQIDKAIA-----LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
C + ++ +A LHI+ E K + D ++++++ GL K +++ A+ +
Sbjct: 408 LLRSMVCGGQAVNNDVAGGAHMLHIR-EDAKPNSD--SFNIVVCGLCKVKKLDMALALTK 464
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M L F ++ LC++ L + ++M +G P E TY + G
Sbjct: 465 DMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 194/432 (44%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G + + G+ P N L+ L + +++ A + +
Sbjct: 95 TLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKV 154
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
+ G + ++ ++ +C+ G+ + LL S + V+Y+++ID K
Sbjct: 155 LAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLV 214
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+D EM G+ ++P TYS ++ G + + ++ MV + + P +
Sbjct: 215 DEAYDLYTEMV-GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYT- 272
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L GK AE + + L ++ V A ++++ +++
Sbjct: 273 -ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQ 331
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N LCK + +E L ++ ++ +P + + + C G+
Sbjct: 332 MGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISY 391
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L +LD+G D ++L++ C N +D+AIAL K++ +V T+ +LLD
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR++ A+ F D + + ++ ++ ++++ LC L +A+ M G
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS 511
Query: 428 DEATYKQVISGF 439
D T++ +I F
Sbjct: 512 DAVTFEIMIRAF 523
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 149/361 (41%), Gaps = 15/361 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R + + P V + ++D L + + A LY MV G+SP+ T+S++
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNG-RNL 144
C G+ + LL+ + ++ Y +++D K+G A + L M NL
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYVIQKLSDMGKTYA 203
YS+++DG + + R+ M + + P H S +I L + +
Sbjct: 302 --DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYS---IMINGLCKIKRVDE 356
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A +F+ + + T ++ L K GR+ ++ + +RG Y ++
Sbjct: 357 ALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLID 416
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK + L + ++ P + + C G+ K E +L KG L
Sbjct: 417 ALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCL 476
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF---KDGRMEEAV 380
+ + ++ C +D+A+AL ++E D T+++++ F ++ + E+ V
Sbjct: 477 NVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLV 536
Query: 381 R 381
R
Sbjct: 537 R 537
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 41/346 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D L + ++Y M G P V + L+ ++ A L MV
Sbjct: 202 SMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL 261
Query: 76 DGVSPNKFTWSLVAQILCRSGKF---EVVLGL-------LDSGIYSSVM--YNLVIDFYS 123
+ ++P+ +T++++ LC+ GK E VL + LD +YS++M Y LV + +
Sbjct: 262 ENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNN 321
Query: 124 KKGDF------GAAFD---------------RLNEMCN------GRNLTPGFSTYSSILD 156
K F G D R++E N +N+ P TY+S++D
Sbjct: 322 AKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLID 381
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + M+++ P N +I L G A +F + D+ I
Sbjct: 382 CLCKSGRISYVWDLFDEMLDRGQPPDVITYNN--LIDALCKNGHLDRAIALFNKMKDQAI 439
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T +L L K GR+K A++ + + +G + Y +N LCKE +E
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L + + G I A+ + + K + + E+L+ ++ +GLL
Sbjct: 500 LQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 182/418 (43%), Gaps = 14/418 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D E+ M G +AL+D L + + A L M G +P T++ +
Sbjct: 92 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSII 151
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CR+ + + G ++ + + Y +I + K D G + L E+ R
Sbjct: 152 TGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTR-RGF 210
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TP TYS+++DG + + + V + E P + +I G A
Sbjct: 211 TPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNS--LIGGYCRAGDMDEA 265
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + D+K T ++ A K GR+ +A +++ + ++ + + V+
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC E + E+ LL ++ RG P + V C + ++ EEL++ +G + +
Sbjct: 326 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS--LDVATYDVLLDGLFKDGRMEEAVRI 382
+ + L+ C + D+A+ ++ G VA Y ++LD L +DGR ++AV+
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 445
Query: 383 FDYMKELK-VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M + V ++++F VV LC + ++A + +EM+K GH P T V+S +
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 19/403 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N ++ L R +R A +Y M D P+ T++ + L ++ + + +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 105 LDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN---GRNLTPGFSTYSSILDGARR 160
L + + V N + + G D E+ R + TYS+++DG +
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
E+ + + +V M E+ P + + +I + A ++ E
Sbjct: 122 CERLDEAVALVETMAERGCAPT--VVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ K V +++ ++ RG T Y ++ LCK G LRD
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKA-------GRLRD 232
Query: 281 VV----ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
V E P A+ + + C G E LL ++D D ++LM +C
Sbjct: 233 AVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
++D A L ++ K S DV T+ L+DGL +GRME+A+ + + + +
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ VV C ++RKA + + G P+ TY +++G
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 129/310 (41%), Gaps = 21/310 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D G D ++++ M P N+L+ R ++ A L G MV
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
D +P+ T++ + C+ G+ + L + + V + ++D +G
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L E+ R P TY+ ++DG + + ++ +V + +P +
Sbjct: 335 ALELLEEITR-RGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTY--NI 391
Query: 191 VIQKLSDMGKTYAAEMIFKR------ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
++ G+T A + C + + +L AL ++GR +A+Q Y
Sbjct: 392 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY----AIILDALCRDGRTDDAVQFYE 447
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +RG + + V LCK HQP++ LL ++++ G+ P V++ C G
Sbjct: 448 EMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 507
Query: 305 KWKEVEELLS 314
++ +EL S
Sbjct: 508 MIQKADELAS 517
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P FL+ ++ LS + A + + + + T ++++L RV +A
Sbjct: 36 PPDFLTYTK-LVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 94
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + RG+ Y A V+ LCK + +E L+ + ERG P + + +
Sbjct: 95 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGF 154
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C + E + ++ +G D ++L+ +C +R + + + L ++ + + D+
Sbjct: 155 CRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDI 214
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
TY ++DGL K GR+ +AV IF+ M ++ ++ ++ C ++ +A++ +M
Sbjct: 215 VTYSTVIDGLCKAGRLRDAVDIFEEMS--CAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 421 LKMGHKPDEATYKQVISGF 439
+ PD TY ++S F
Sbjct: 273 VDDKCAPDVVTYTTLMSAF 291
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 183/401 (45%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + + +++ +++ ++ Y M+ +SPN T++ + LC++ + + +
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145
Query: 105 LDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + + S VM YN ++ + G A L +M + P TY+S++D
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMDYLC 204
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + +I M ++ L P+ G ++Q + G + I
Sbjct: 205 KNGRCTEARKIFDSMTKRGLKPEITTYGT--LLQGYATKGALVEMHGLLDLMVRNGIHPN 262
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ A +K+ +V+EA+ ++ + ++G+ Y A + +LCK + E+
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+++ G P + + + C KW+ EEL+ +LD+G+ L++ +S+++ +C
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++ ++ L + ++ D+ TY L+DG G+M+EA ++ M + + ++
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYS 442
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C + ++ A+ EM G PD TY ++ G
Sbjct: 443 TLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 207/482 (42%), Gaps = 46/482 (9%)
Query: 2 IQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
I + +G D D +S V++ + +G Y M P V N+++ AL +
Sbjct: 76 IMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCK 135
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM- 114
+ A + MV+ GV P+ T++ + C SG+ + + L G+ V+
Sbjct: 136 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 195
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN ++D+ K G A + M R L P +TY ++L G ++ LM
Sbjct: 196 YNSLMDYLCKNGRCTEARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 254
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
V + P H++ ++ + K A ++F + + + T G ++ L K G
Sbjct: 255 VRNGIHPNHYVFS--ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 312
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
RV++A+ + + + G++ + Y + ++ LC ++ E L+ ++++RG + +
Sbjct: 313 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 372
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL------- 347
+ S C +G+ E E+L ++ G+ D S+L++ YC ++D+A L
Sbjct: 373 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 432
Query: 348 ---------------HIKIEKLKGSL-------------DVATYDVLLDGLFKDGRMEEA 379
+ KI ++K +L D+ TY+++L GLF+ R A
Sbjct: 433 GMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 492
Query: 380 VRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ K + + S++ I++ LC K A++ + M K + T+ +I
Sbjct: 493 KELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 552
Query: 439 FM 440
+
Sbjct: 553 LL 554
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 152/367 (41%), Gaps = 35/367 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y+ KG ++ + +M G P + L+ A +Q ++ A ++ M + G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
++PN T+ V ILC+SG+ E D+ +Y + +ID
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVE------DAMLY----FEQMID----------------- 326
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLS 196
L+PG Y+S++ G K E ++ ++ M+++ + L F + +I
Sbjct: 327 ----EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS---IIDSHC 379
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G+ +E +F ++ T ++ G++ EA ++ + G+
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +N CK + ++ L R++ G P + + + + +EL +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G L+ + ++ C N+ D A+ + + + L+ T+++++D L K GR
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559
Query: 377 EEAVRIF 383
+EA +F
Sbjct: 560 DEAKDLF 566
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 169/408 (41%), Gaps = 40/408 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S+++ Y+ + + + V+ MR G P A++ L + + A + M
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDF 128
+ +G+SP ++ + LC K+ E++L +LD GI +++ +N +ID + K+G
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-----KH 183
+ ++L ++ + P TYS+++DG K + + +++ MV + P
Sbjct: 385 IES-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443
Query: 184 FLSG----------------------------NDYVIQKLSDMGKTYAAEMIFKRACDEK 215
++G + ++Q L +T AA+ ++
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+L+ T +L L K +A++++ + + + + ++ L K + +E
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L G +P + G+G +E+++L ++ D G +DS + ++
Sbjct: 564 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 623
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A I++ SL+ +T + +D L G+ +E R
Sbjct: 624 LQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFL 670
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDS--DYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+L L E R +EA+++ H++++ G Y +N KE ++ ++++
Sbjct: 57 LLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLD 116
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+ P + + +A+ C + E+L+ ++ G++ D +S++ +CS+ Q +
Sbjct: 117 QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKE 176
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
AI K+ DV TY+ L+D L K+GR EA +IFD M +
Sbjct: 177 AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 199/450 (44%), Gaps = 39/450 (8%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRV-YGFVPAVSACNALLDALYRQNEIRLASCLY 70
+D+L + ++ Y+ GL+ + L+ M V +G V N LL+ L N+++L +
Sbjct: 124 NDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAH 183
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL---------GLL-DSGIYSSVMYNLVID 120
MV G+ P+ T++++ + LCR+ + + GLL D ++++M +
Sbjct: 184 SNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFI-- 241
Query: 121 FYSKKGDFGAAFDRLNEMCNG---------RNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
++G+ A +M L GF I + R E+ + +
Sbjct: 242 ---EEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE--- 295
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
G +K + ++ LS G A + E + T ++ L
Sbjct: 296 GFFPDKYTF--------NMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC 347
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K G V EA+++ + + ER + Y ++ LCKE+Q EE L + +G +P
Sbjct: 348 KLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVC 407
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + C EL + KG D F + L++ C ++ +A+ L ++
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS--SSSFVIVVSRLCHLKE 409
E + +V TY+ L+DG K+ R+ EA IFD M EL+ VS S ++ ++ LC +
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM-ELQGVSRNSVTYNTLIDGLCKSER 526
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A + D+M+ G +PD+ TY +++ F
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYF 556
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 178/406 (43%), Gaps = 12/406 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P N L++ L + ++ A + M+R+G P+ +T++ + LC+ G+ +
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ +L+ I ++V YN +I K+ A +L + G+ + P TY+S++
Sbjct: 356 VKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEA-TKLALVLTGKGILPDVCTYNSLIQ 414
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G V+ + M K P F + +I L GK A + K
Sbjct: 415 GLCLSRNHTVAMELYKEMKTKGCHPDEFTY--NMLIDSLCFRGKLQEALNLLKEMEVSGC 472
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ K R+ EA +I+ + +G++ Y ++ LCK + EE
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L+ ++ G P + + C G K+ +++ + G D +L+ C
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC 592
Query: 337 SNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE-LKVVSS 394
+++ A L ++ ++KG +L Y+ ++ LF+ R +EAVR+F M E + +
Sbjct: 593 KAGRVEAATKL-LRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDA 651
Query: 395 SSFVIVVSRLCH-LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ IV LC + +A+ EML+ G+ P+ +++ + G
Sbjct: 652 VTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGL 697
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 168/374 (44%), Gaps = 19/374 (5%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ T++ + L + + + + D+ V YN++I Y
Sbjct: 192 WQAMRLAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVVSYNILIKGYC 251
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE------K 177
+ G A RL +M L P TY +++ +R+ + + L E
Sbjct: 252 RAGRTQDAMARLADMREHAELAPDKVTYLTLM---QRHYSEATFPQCIALFQEMEERGMG 308
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
K +P+H VI LS GK + A +F+R ++ ++ K GR K
Sbjct: 309 KEIPQH---AYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREK 365
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA+ ++ + GI + Y VN LC+ EE R VE+G A+ + +
Sbjct: 366 EAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLI 425
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
G + +EL ++ KG + DS+C + L++ + D A A + ++E
Sbjct: 426 DGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDGCD 485
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKN 416
V TY +L+DGLFK+ + EEA++ +D M + + ++++F + + LC + +A +
Sbjct: 486 QTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRALSNGLCLSGKFSRAWRI 545
Query: 417 HDEMLKMGHKPDEA 430
DE+ MG P+ A
Sbjct: 546 LDELAPMGVIPETA 559
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 123/314 (39%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G++ A LV+ S G + L V+ M G + AL+D++ + + A
Sbjct: 308 GKEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREKEA 367
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M G+ + T+ +V LCR G E L S + V N +
Sbjct: 368 MALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIF------- 420
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
Y+S++DG + + + + MV K +P +
Sbjct: 421 ------------------------YTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYC- 455
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L G+T A +KR D+ + T ++ L KE + +EA++ + +
Sbjct: 456 -YNVLIDALVKAGRTDDACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSM 514
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + A N LC + +L ++ G IP + C G++
Sbjct: 515 IDKGITPTAAAFRALSNGLCLSGKFSRAWRILDELAPMGVIPETAH-EDMINVLCKTGRF 573
Query: 307 KEVEELLSAVLDKG 320
K+ +L ++ KG
Sbjct: 574 KQACKLADGIVQKG 587
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVV 401
+A+A+ ++ K + A Y L+D + K GR +EA+ +F+ MK + + + ++ +VV
Sbjct: 331 EALAVFERMSKRGCPANAAMYTALIDSMGKFGREKEAMALFERMKATGIELDAVTYGVVV 390
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC L +A+ ++ G + Y +I GF
Sbjct: 391 NCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLIDGF 428
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 201/424 (47%), Gaps = 13/424 (3%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G MD LE++ M GF + L++AL + + R A L+ M+ + S N FT
Sbjct: 22 EGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFT 81
Query: 85 WSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
+ LV LC+ G ++ +++ GI +V+ Y+ +I+ + G A + +EM
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV 141
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ + + TY+S++ + R+ + + R MV + +LP + +I LS G
Sbjct: 142 S-QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD--VVTFTTLIDHLSKKG 198
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A IF+ + T +L L ++ A++++ ++ ERGI + Y
Sbjct: 199 KVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYN 258
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS--AVL 317
+N C + EE L R + P + + + G+ + +EL + +
Sbjct: 259 TLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQIC 318
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ LD++ + L++ C N I++AI + ++ +K + Y +L+ G+F+ R E
Sbjct: 319 GQSPSLDTY--TVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A+ IFD + + +V + ++ I+++ LC +L +A + +M + G + DE ++ +I
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436
Query: 437 SGFM 440
GF+
Sbjct: 437 RGFL 440
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 184/393 (46%), Gaps = 8/393 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
LV+D GL + GL+++R M G P V ++L++ L R ++R A L+ MV
Sbjct: 84 LVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQ 143
Query: 77 GVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+ N T++ + CR G ++ ++ GI V+ + +ID SKKG A
Sbjct: 144 GIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEA 203
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ ++ E+ + P TY+S+L+G + + + + R+ +MVE+ + K + + +
Sbjct: 204 Y-KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI--KIDVISYNTL 260
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I GKT A +F++ E++ T +LKAL + GR++ A ++++ + G
Sbjct: 261 INGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQ 320
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y ++ LCK EE + R + Y P S + +W+ E
Sbjct: 321 SPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAME 380
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ + GL+ + + ++ C ++ +A L +++E+ D +++ ++ G
Sbjct: 381 IFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFL 440
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
++ ++++A+ M+E + S +++ L
Sbjct: 441 QENQVQKAMEFLKRMREKNFSPNDSVTLMLVNL 473
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 164/407 (40%), Gaps = 44/407 (10%)
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM--------------- 114
++ G PN T S + + +C GK L L D SG ++
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 115 ---------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
Y LVID K G EM N + P YSS
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMIN-MGICPNVIVYSS 119
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G R K + + MV + + K + + +I G A F +
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGI--KANVITYNSLIHASCRFGLWKEATRTFSQMVG 177
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
E I T ++ LSK+G+V+EA +I+ L+ ++G Y + +N LC HQ +
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L +VERG + + + C GK +E L + + L + L++
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
N +I A L ++ S + TY VLLDGL K+G +EEA+ +F +K +K
Sbjct: 298 ALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKP 357
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S + I++ + + AM+ DE+ +G P+ TY +I+G
Sbjct: 358 SIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+Q C G+ D +++LD G + ++V+R ++ + P++ + L+ +++
Sbjct: 315 MQIC-GQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQAR 373
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYN 116
A ++ + G+ PN T++++ LC+ GK + + + +SG + +N
Sbjct: 374 RWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFN 433
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD-GARRYEKTEVSDRIVGLMV 175
+I + ++ A + L M +N +P S +++ A + +E+ + + +V
Sbjct: 434 FIIRGFLQENQVQKAMEFLKRM-REKNFSPNDSVTLMLVNLYAADAQSSELPNNFLHELV 492
Query: 176 EKKLL 180
+KK L
Sbjct: 493 QKKTL 497
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 196/443 (44%), Gaps = 48/443 (10%)
Query: 6 EGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+G D D +S V++ + +G Y M G +P V ++++ AL + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLV 118
A + +MV++GV PN T++ + C SG+ + +G L G+ V+ YN +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEK 177
+D+ K G A + M R L P +TY ++L G A + E+ ++ LMV
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHG-LLDLMVRN 368
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+ P H+ +F ++ A +K+G+V
Sbjct: 369 GIHPNHY----------------------VFS---------------ILICAYAKQGKVD 391
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A+ ++ + ++G+ Y + +LCK + E+ +++ P + + +
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
S C KW + +EL+ +LD+G+ LD+ +S+++ +C ++ ++ L + ++
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D+ TY L+DG G+M+EA ++ M + + ++ +++ C + + A+
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
EM G PD TY ++ G
Sbjct: 572 FREMESSGVSPDIITYNIILQGL 594
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 167/375 (44%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSG--IYSSVMYNLVIDFYSKK 125
M + G PN F+++++ + LC + + L LL D G V Y VI+ + K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
GD A+ +EM + R + P TYSSI+ + + + + ++ MV+ ++P
Sbjct: 213 GDLDKAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN--C 269
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ G+ A K+ + +E T ++ L K GR EA +++
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+++RG+ + Y + + E+ GLL +V G P S + + +GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + S + +GL D+ +++ C + +++ A+ ++ + S Y+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ L + ++A + M + + + + F ++ C + ++ K D M+++G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 425 HKPDEATYKQVISGF 439
KPD TY +I G+
Sbjct: 510 VKPDIITYSTLIDGY 524
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C GR L GF+ +++ R + + + GL +K+ D V+++++ +
Sbjct: 103 CAGR-LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS-----DAMDIVLRRMTQL 156
Query: 199 G---KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G ++ ++ K CDE R +EA+++ ++ + G
Sbjct: 157 GCIPNVFSYNILLKGLCDEN-------------------RSQEALELLQMMPDDGGDCPP 197
Query: 256 S--DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N KE ++ G ++++RG +P + S +A+ C + E+L
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++++ G++ + +S++ YCS+ Q +AI K+ DV TY+ L+D L K+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
GR EA ++FD M K G KP+ TY
Sbjct: 318 GRCTEARKMFD----------------------------------SMTKRGLKPEITTYG 343
Query: 434 QVISGF 439
++ G+
Sbjct: 344 TLLQGY 349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 168/422 (39%), Gaps = 46/422 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G + +++ M G P ++ LL + + L MVR+G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
+ PN + +S++ + GK + V + G+ +V Y VI K G A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M + R L+PG Y+S++ ++K
Sbjct: 430 RYFEQMIDER-LSPGNIVYNSLIHSLCIFDKW---------------------------- 460
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D K EM+ + C + I ++ + KEGRV E+ +++ L+ G+
Sbjct: 461 ----DKAKELILEMLDRGICLDTIFFNS-----IIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C + +E LL +V G P + + + C + ++ L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ G+ D + +++ R+ A L++ I + L+++TY+++L GL K
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 373 DGRMEEAVRIFDY--MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ +EA+R+F + +L+ + + +F I++ L + +A + G PD
Sbjct: 632 NNLTDEALRMFQNLCLTDLQ-LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 431 TY 432
TY
Sbjct: 691 TY 692
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 138/315 (43%), Gaps = 8/315 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+ +G + V+ MR G P ++ L + + A + M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+ +SP ++ + LC K+ E++L +LD GI ++ +N +ID + K+G
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ ++L ++ + P TYS+++DG K + + +++ MV + P +
Sbjct: 497 ES-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY--N 553
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + + A ++F+ + T +L+ L + R A ++Y I+E
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + S Y ++ LCK + +E + +++ + + + G+ E
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 310 EELLSAVLDKGLLLD 324
++L +A+ GL+ D
Sbjct: 674 KDLFAALSANGLVPD 688
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV P+ T+S + C +GK + LL S +
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V YN +I+ Y K A EM ++P TY+ IL G + +T
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + VG+ L LS + ++ L T A +F+ C ++L+ T
Sbjct: 602 AAKELYVGITESGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
M+ AL K GR EA ++ +S G+ V D Y+ +
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGL-VPDVRTYSLM 695
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI-KIEKL 354
+ S C G+ L V+ KG +D+ + L++ C++++ A+ + + ++ +L
Sbjct: 97 LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LKVVSSSSFVIVVSRLCHLK 408
+V +Y++LL GL + R +EA+ + M + VV S+ V++
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEG 213
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L KA + EML G P+ TY +I+
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 187/430 (43%), Gaps = 11/430 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 81 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V+ G PN T+ +V LC+ G ++ LL+ + V++N +ID K
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM + + P TYSS++ Y + + +++ M+EKK+ P L
Sbjct: 201 DDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN--LVTF 257
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK AE + I+ T ++ R+ +A Q++ +
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + E+ L R++ RG + + + + G
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C+N +++KA+ + ++K + LD+ Y +++
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G+ K G++++ +F + LK V + ++ ++S LC + L++A +M + G
Sbjct: 438 GMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496
Query: 427 PDEATYKQVI 436
PD TY +I
Sbjct: 497 PDSGTYNTLI 506
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 181/410 (44%), Gaps = 10/410 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+MM++ G+ P++ ++LL+ I A L MV G P+ T++ + L
Sbjct: 69 KMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 127
Query: 96 GKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
K + L+D + V Y +V++ K+GD AF+ LN+M +
Sbjct: 128 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVI 186
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+++I+D +Y + + + M K + P + +I L G+ A +
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS--LISCLCSYGRWSDASQLLSD 244
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++KI T ++ A KEG+ EA +++ + +R I Y + +N C +
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 304
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ + +V + P + + C + ++ EL + +GL+ D+ ++
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L++ + D A + ++ D+ TY +LLDGL +G++E+A+ +FDYM++ +
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 391 V-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + ++ +C ++ + G KP+ TY +ISG
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 152/372 (40%), Gaps = 32/372 (8%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDF 128
L+G MV+ P+ F ++ + + + KF++V+ L G + Y I S
Sbjct: 29 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSS---- 84
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
LN C+G+ ++ + +++ R + + I GL + K ++
Sbjct: 85 -----LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK--ASEAVALV 137
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D ++Q R C + T G ++ L K G + A + + +
Sbjct: 138 DRMVQ----------------RGCQPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEA 177
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
I + ++ LCK ++ L +++ +G P + S ++ C G+W +
Sbjct: 178 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 237
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+LLS +++K + + ++L++ + + +A LH + K D+ TY+ L++
Sbjct: 238 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 297
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G R+++A ++F++M ++ ++ C K + + EM G
Sbjct: 298 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 357
Query: 428 DEATYKQVISGF 439
D TY +I G
Sbjct: 358 DTVTYTTLIQGL 369
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG E++R M G V L+ L+ + A ++ MV DGV P+ T+S++
Sbjct: 342 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 90 QILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC +GK E L + D S + +Y +I+ K G +D + + + +
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGV 460
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--NDYVIQKLSDMGKTY 202
P TY++++ G + + ++ M E LP SG N + L D K
Sbjct: 461 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD---SGTYNTLIRAHLRDGDKAA 517
Query: 203 AAEMIFK-RAC 212
+AE+I + R+C
Sbjct: 518 SAELIREMRSC 528
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 196/429 (45%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G G V + G+ P N L+ L + +++ A + +
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
+ G N+ +++ + +C+ G + L D + VMYN +ID K
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLV 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM + ++ TY++++ G K + + ++ MV K + P +
Sbjct: 216 SEAYGLFSEMA-VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTY-- 272
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L GK A+ + ++ T ++ VK+A +++ +S
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N CK +E L +++ ++ +P + S + C G+
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L+ + D+G D SSL++ C N +D+AIAL K++ + ++ T+ +LLD
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++A +F D + + ++ ++ ++++ C L +A+ +M G P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512
Query: 428 DEATYKQVI 436
+ T++ +I
Sbjct: 513 NAFTFETII 521
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 152/363 (41%), Gaps = 45/363 (12%)
Query: 2 IQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
++ +GR ++ D + + ++D L + ++ M V G V N L+
Sbjct: 187 LRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCI 246
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGI 109
+++ A L MV ++PN +T++++ LC+ GK + +L D
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 110 YSSVM------------------------------YNLVIDFYSKKGDFGAAFDRLNEMC 139
YS++M Y ++I+ + K A + EM
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM- 365
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ +N+ PG TYSS++DG + + ++ M ++ P ++ + +I L G
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQ-PADVITYSS-LIDGLCKNG 423
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A +F + D++I T +L L K GR+K+A +++ + +G + Y
Sbjct: 424 HLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYN 483
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N CK+ EE +L + + G IP A + + K + + E+LL ++ +
Sbjct: 484 VMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
Query: 320 GLL 322
GLL
Sbjct: 544 GLL 546
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 148/350 (42%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++DA+ + + A L+ M G+S + T++ + C GK + +GL
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGL 256
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ YN+++D K+G A L M + P TYS+++DG
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYF 315
Query: 160 RYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + + M + P + + N + K+ D A +FK + +
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD-----EALNLFKEMHQKNM 370
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR+ + + +RG Y + ++ LCK +
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ P + + C G+ K+ +E+ +L KG L+ + + ++ +C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+++A+ + K+E + T++ ++ LFK ++A ++ M
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 10/313 (3%)
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + N M R+ TP ++ ILD + + + + + K + P L +
Sbjct: 43 AVSQFNRMLCMRH-TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD--LITLNI 99
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I MG+ + + T ++K L +G+VK+A+ + + +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y +N +CK LR + R P + + + + C E
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L S + KG+ D ++L+ +C ++ +AI L ++ + +V TY++L+D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHK 426
K+G+++EA + M + V VI S L + E++KA + M MG
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPD---VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336
Query: 427 PDEATYKQVISGF 439
PD TY +I+GF
Sbjct: 337 PDVHTYTILINGF 349
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 192/436 (44%), Gaps = 32/436 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+++ ++ +G ++++ M YGFV ++ + L++ L +Q +I A L+ M
Sbjct: 282 TLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEM 341
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----YSSV--MYNLVIDFYSKKGD 127
GV+P+ V + CR G F V+ ++ SV +YN+V++ G+
Sbjct: 342 KSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGE 401
Query: 128 FGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV--GLMVEKKLLPKHF 184
AA+ L M C G+ + + + +L + S IV GL KKL
Sbjct: 402 VEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL----- 456
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
DM +MI C KI + +D ++ L R++E I++
Sbjct: 457 ------------DMALALTKDMI-SLGCKGKILMFND----LIHELCNMDRLEEGYGIFN 499
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + G+T + Y + +C+ P+ LLR++ G+ P + V C G
Sbjct: 500 QMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSG 559
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E + L +L G L D S+ M C+ ++D A+ L I DV ++
Sbjct: 560 RVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHN 619
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L++G K +++EA +I + M E + S ++ +++ C + KA+ D+M+
Sbjct: 620 ILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYE 679
Query: 424 GHKPDEATYKQVISGF 439
+P TY +I GF
Sbjct: 680 EKQPTVITYTSLIDGF 695
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLI-SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
G +L+ L G A++ + + G T Y ++ L K + ++ LR++V
Sbjct: 142 GFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMV 201
Query: 283 ER---GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
R G + L+ + C G+ + ++ + + G + D ++LM +
Sbjct: 202 ARCGDGSVD-KYTLTSLLRCYCNAGRPDDANDVFQRMSELGWV-DEHVLTTLMVAFSKWG 259
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFV 398
++D A+ L +E L L T VL+ G K GR+++A+ +F M VV + +
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC K++ +A+K EM G PD K+VI F
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAF 360
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 125/305 (40%), Gaps = 28/305 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G ++ M+ G P+ N+L + R+ + + A L M +G P + +
Sbjct: 493 EGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMV 552
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG-------- 141
Q LC SG+ + LD + + ++V + AA +N MCN
Sbjct: 553 QQLCFSGRVTEAVQFLDGMLQIGFLPDIVT--------YSAA---MNGMCNTGEVDDALH 601
Query: 142 --RNLT-----PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
R+++ P ++ +++G R+ K + + +I+ M+EK L P + + +I
Sbjct: 602 LFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPS--VVTYNLMIDV 659
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ A + E+ + T ++ GR EAI+++ + E+G
Sbjct: 660 CCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPN 719
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ Y AF+N L K + E ++V +G+ L F+ G + ELL
Sbjct: 720 NIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLK 779
Query: 315 AVLDK 319
VL K
Sbjct: 780 EVLQK 784
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 222 TCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDSDYYAFVNVL---CKEHQPEEVCGL 277
T C+L AL+K GR +A ++ +++ G D Y ++L C +P++ +
Sbjct: 176 TYNCLLDALAKAGRADDAQARLREMVARCGDG--SVDKYTLTSLLRCYCNAGRPDDANDV 233
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVE---ELLSAVLDKGLLLDSFCCSSLMEY 334
+ + E G++ + + VA KW +V+ ELL ++ G+ L S L+
Sbjct: 234 FQRMSELGWVDEHVLTTLMVAFS----KWGKVDGAVELLGSMEALGMRLSEKTLSVLVHG 289
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ ++DKA+ + K+ +D+A Y VL++GL + + AV++F MK V
Sbjct: 290 FTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAP 348
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 145/355 (40%), Gaps = 35/355 (9%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+S YN ++D +K G A RL EM C ++ T +S+L + + +
Sbjct: 173 NSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDK--YTLTSLLRCYCNAGRPDDA 230
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ + M E + +H L+ ++ S GK A + + L + T ++
Sbjct: 231 NDVFQRMSELGWVDEHVLT---TLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLV 287
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+K+GRV +A+ ++ + G V + Y + LC++ L +++ G
Sbjct: 288 HGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVA 347
Query: 288 PCAMELSRFVASQCGKGKWKEVEELL----------SAVLDKGLLLDSFC-CSSLMEYY- 335
P L + + + C +G + + + S V ++L+ C + Y
Sbjct: 348 PDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQ 407
Query: 336 ------CSNRQIDKAIA-----LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
C + ++ +A LHI+ E K + D ++++++ GL K +++ A+ +
Sbjct: 408 LLRSMVCGGQAVNNDVAGGAHMLHIR-EDAKPNSD--SFNIVVCGLCKVKKLDMALALTK 464
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M L F ++ LC++ L + ++M +G P E TY + G
Sbjct: 465 DMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 190/429 (44%), Gaps = 12/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDF 128
V+ G P+ T+ V LC+ G ++ L LL+ + I ++ V++N +ID K
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D EM + + P TY+S+++ Y + + R++ M+EKK+ P +
Sbjct: 275 EVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN--VVTF 331
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK AE + + I+ T ++ R+ EA Q++ +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y +N CK + E+ L R++ +RG + + + + G
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ + ++ + D S L+ CS ++D A+ + ++K + L++ Y+ +++
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 369 GLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ K G++ EA +F + + VV+ ++ ++S LC + L++A +M + G P
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIKPDVVTYNT---MISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 428 DEATYKQVI 436
+ TY +I
Sbjct: 569 NSGTYNTLI 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 191/430 (44%), Gaps = 12/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+ ++C+ + L V M G+ P + ++LL+ I A L MV
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ FT++ + L K + L+D + V Y V++ K+GD
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + LN+M R + +++I+D +Y EV+ + M K + P + +
Sbjct: 242 ALNLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN--VVTYNS 298
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + ++KI T ++ A KEG++ EA +++ + +R
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y +N C ++ +E + + +V + +P + + C + ++
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ ++ +++++ + D A + ++ + D+ TY +LL GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G+++ A+ IF Y+++ ++ ++ + ++ +C ++ +A D + KPD
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW---DLFCSLSIKPDV 535
Query: 430 ATYKQVISGF 439
TY +ISG
Sbjct: 536 VTYNTMISGL 545
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 163/400 (40%), Gaps = 42/400 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ N LL A+ + N+ L L M G+S + +T+S+ CR + + L +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
L +K G P T SS+L+G ++
Sbjct: 141 L-----------------AKMMKLG--------------YEPDIVTLSSLLNGYCHSKRI 169
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQD 220
+ +V MVE P F +I L K A + + +R C +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTT--LIHGLFLHNKASEAVALVDQMVQRGCQPDLV--- 224
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T G ++ L K G + A+ + + + I + ++ LCK E L +
Sbjct: 225 -TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ +G P + + + C G+W + LLS +L+K + + ++L++ + +
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVI 399
+ +A LH ++ + D TY++L++G R++EA ++F +M + + ++
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C K + ++ EM + G + TY +I GF
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 248 ERGITVRDSDYYAFV-NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
ER DY + N L + ++ L D+V+ P +E ++ +++ K+
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ V L + G+ D + S + +C Q+ A+A+ K+ KL D+ T L
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L+G R+ +AV + D M E+ + +F ++ L + +A+ D+M++ G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 426 KPDEATYKQVISGF 439
+PD TY V++G
Sbjct: 220 QPDLVTYGTVVNGL 233
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 207/456 (45%), Gaps = 31/456 (6%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+++ E + +++ Y G+ GL +R F+P V ACN LL L R
Sbjct: 167 LVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRF 226
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMY 115
N I +Y M R G+ N +T++++ +LC+ G + V LD G V Y
Sbjct: 227 NYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTY 286
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N +++ Y KK AF L ++ R + P T++ +++G K + + ++ MV
Sbjct: 287 NTLVNSYCKKRRLEDAF-YLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMV 345
Query: 176 EKKLLP-----KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ + P +SG Y + M ++ EMI C + + TC +++
Sbjct: 346 HRGIDPDVVSYNTLVSG--YCREGKMQMCRSLLHEMIGNGICPDSV-----TCRLIVEGF 398
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+++G++ A+ + I + + Y + LC E +P L + + GY+P
Sbjct: 399 ARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKI 458
Query: 291 MELSRFVASQCGKGKWKEVEELL---SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
++ V S C K+ VEE L S ++ + ++L+ +++ C ++++ +
Sbjct: 459 NTYNKLVESLC---KFNNVEEALILKSEMVKRSMILNLVAYRAVISCLC---RVNRTLEA 512
Query: 348 HIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSR 403
+E++ S DV L++G ++ ++++AV + + E +V + S+ VV
Sbjct: 513 EGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKV 572
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + + + ++ D++LK+G+ + T K VI G
Sbjct: 573 FCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGL 608
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 194/422 (45%), Gaps = 13/422 (3%)
Query: 28 FMDGLEVYRMMRVY----GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
F + E+ ++++ GF P + N L+AL N+++L L+ MV +G+ +
Sbjct: 100 FTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVS 159
Query: 84 TWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++++ + LC++ + + +L+ G+ + + ++ + ++GD A +M
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM 219
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
L S +++G + + E + R V + E+ P + ++ +
Sbjct: 220 LGYGCLLTNVSV-KVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF--NSLVNGFCRI 276
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G A I ++ + T ++ + K G ++AI+I + R + Y
Sbjct: 277 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY 336
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ LCKE++ E L R +V +G +P + + C E+ + +
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN 396
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
KG D F S L++ C R++ +A+ L ++E + + Y+ L+DGL K R+E+
Sbjct: 397 KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED 456
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A IFD M+ L V SS ++ ++ LC K + +A + D+M+ G KPD+ TY +++
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516
Query: 438 GF 439
F
Sbjct: 517 YF 518
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 192/432 (44%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++ + +G L++ + M YG + + L++ ++ + A +
Sbjct: 195 TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV 254
Query: 74 VRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDF 128
+G SP++ T++ + CR G ++V +++ G V YN +I K G+F
Sbjct: 255 SEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + L +M R +P TY++++ + + E + + ++V K LLP +
Sbjct: 315 EKAIEILQQMI-LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPD--VCTF 371
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +IQ L A +F+ ++ + + T ++ +L E R+KEA+ + +
Sbjct: 372 NTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMES 431
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y ++ LCK + E+ + + G ++ + + C + +E
Sbjct: 432 SGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEE 491
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L+ ++ +GL D F +SL+ Y+C I+KA + + D+ TY L+
Sbjct: 492 ASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIG 551
Query: 369 GLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL + GR++ A ++ ++ +V + ++ V+ L K ++ M+ EM++ P
Sbjct: 552 GLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPP 611
Query: 428 DEATYKQVISGF 439
D T+K V G
Sbjct: 612 DALTHKIVFRGL 623
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + LL + G + ++ ++L++ + + +I+ L I +L D Y++
Sbjct: 71 FDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENL--LKILENELGFKPDTNFYNI 128
Query: 366 LLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ L +D +++ + M E V+ S+F +++ LC +LR A+ +EM G
Sbjct: 129 ALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHG 188
Query: 425 HKPDEATYKQVISGFM 440
KPDE T+ ++ GF+
Sbjct: 189 LKPDEITFTTLMQGFI 204
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 189/434 (43%), Gaps = 11/434 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+ ++C+ G V + G P + L++ L + E A L+ M
Sbjct: 130 TLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM 189
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDF 128
V G P+ +T++ + LC+ G+ GLL ++G + V Y+ +ID +
Sbjct: 190 VAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLV 249
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D + M + ++P TY+S++ G ++ + + + ++ M ++P +
Sbjct: 250 NEALDIFSYM-KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD--IVTF 306
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ GK A + K + +E T ++ S V EA +++H++
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK + +E L +++ +G P + + + C GK +E
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++L + G L D F S L++ +C + KA L ++ ++ Y +L+
Sbjct: 427 AQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVH 486
Query: 369 GLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+ K G ++A ++F +++ L+ + +++ LC L +A++ M G
Sbjct: 487 AMCKSGNHKDARKLFSELFVQGLQ-PHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCP 545
Query: 427 PDEATYKQVISGFM 440
PDE +Y +I G +
Sbjct: 546 PDEISYNVIIRGLL 559
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 150/358 (41%), Gaps = 8/358 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+ M G P + + L+D+L R + A ++ M G+SP+ FT++ + Q LC+
Sbjct: 222 KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKF 281
Query: 96 GKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+++ LL+ ++M +N+++D + K+G A L M + P T
Sbjct: 282 SRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE-MGVEPNVVT 340
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
YSS++ G + + ++ +M+ K P F + +I + A +F
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF--SYNILINGYCKAKRIDEAMQLFNE 398
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + + + ++ + G+++EA ++ + G Y ++ CK+
Sbjct: 399 MIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGY 458
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ L R + P + + V + C G K+ +L S + +GL ++
Sbjct: 459 LGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTT 518
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
++ C +D+A+ +E D +Y+V++ GL + A+ + M++
Sbjct: 519 IINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRD 576
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 12/289 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + +G + L V + M G P V ++L+ ++ A L+ M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
+ G PN F+++++ C++ + + + L + I+ ++V YN +I + + G
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D MC NL P TYS +LDG + + R+ M L P L
Sbjct: 425 REAQDLFRNMCTNGNL-PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN--LVMY 481
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ + G A +F + ++ ++ L KEG + EA++ + +
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI----PCAMEL 293
G + Y + L + L+ ++ +RG+I PC E+
Sbjct: 542 DGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLSEV 590
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD-KGLLLDSFCCSSLMEYYCSNR 339
++ R +PC ++ ++ +++ G++ +V LS ++ GL + + S M +C +
Sbjct: 83 MLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQ 142
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D ++ K+ KL + T+ L++GL K G +AV +FD M ++
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ LC + E A +M + G +P+ TY +I
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 6/180 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + ++ + G + +++R M G +P + + LLD +Q +
Sbjct: 402 QGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGK 461
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVID 120
A L+ AM + PN ++++ +C+SG ++ L G+ V +Y +I+
Sbjct: 462 AFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIIN 521
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K+G A + M P +Y+ I+ G +++ + +VG M ++ +
Sbjct: 522 GLCKEGLLDEALEAFRNM-EADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 208/475 (43%), Gaps = 44/475 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G +S + A V+ + + ++ E++ M G P + A N L+ L R+ ++
Sbjct: 175 QGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQE 234
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---GIYSSVM-YNLVIDF 121
+ L +++ GVSPN FT ++ Q C+ + LLD G+ V+ YN +I
Sbjct: 235 SERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICG 294
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K A L +M N GF TY+SI+DG + + +D+I+ K +P
Sbjct: 295 LCKNFKVVEAEHYLRKMVNEGYEPDGF-TYNSIIDGYCKLGMMQNADQILRDGAFKGFVP 353
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
S +I L G A +F A ++ ++ C ++K LS++G + +A++
Sbjct: 354 DE--STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALK 411
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + +SE G + Y +N LCK + L+ D + +G++P + + C
Sbjct: 412 LMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYC 471
Query: 302 GK-----------------------------------GKWKEVEELLSAVLDKGLLLDSF 326
K GK+++V +++KG + +
Sbjct: 472 KKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNII 531
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L E +C R++++A+ L +++ + DV + L+ G +G ++ A ++F +
Sbjct: 532 TYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRV 591
Query: 387 KELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E S + ++ I+++ + A K ++M + G PD TY+ +I GF
Sbjct: 592 DEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGF 646
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 202/492 (41%), Gaps = 76/492 (15%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + ++V+ M + P+V + NA+++ L A +Y M G+ P+
Sbjct: 86 YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
+T+++ + CR+ + LL++ G SS V Y VI + ++ A +
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV----- 191
EM G + P ++ ++ R + S+R++ ++++ + P F + N ++
Sbjct: 206 EML-GLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLF-TVNIFIQGFCQ 263
Query: 192 -------IQKLSDMG---------------------KTYAAEMIFKRACDEKIELQDDTC 223
I+ L +G K AE ++ +E E T
Sbjct: 264 RAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ K G ++ A QI + +G +S Y + +N LC++ + + + +E
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383
Query: 284 RGYIP--------------------------------CAMELSRF---VASQCGKGKWKE 308
+G P C+ ++ + + C G +
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSD 443
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ L+ + KG L D F ++L++ YC ++D AI + ++ S DV TY+ +L+
Sbjct: 444 ADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN 503
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K G+ E+ + F M E V + ++ I+ C +++ +A+ +EM G P
Sbjct: 504 GLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTP 563
Query: 428 DEATYKQVISGF 439
D + ++ GF
Sbjct: 564 DVVNFGTLMKGF 575
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 166/400 (41%), Gaps = 62/400 (15%)
Query: 21 CYSHKGLFMDGLEVYRMMRVY------GFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
C GL DG ++ R + V+ G P + CN L+ L +Q I A L M
Sbjct: 359 CSLINGLCQDG-DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMS 417
Query: 75 RDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFG 129
+G SP+ +T++LV LC+ G +V+ + G V +N +ID Y KK
Sbjct: 418 ENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLD 477
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYE------------------------ 162
A + ++ M N ++P TY+SIL+G A +YE
Sbjct: 478 NAIEIVDRMWN-HGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNIL 536
Query: 163 --------KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
K E + ++ M K L P G +++ D G A +FKR DE
Sbjct: 537 TESFCKARKVEEALNLIEEMQNKGLTPDVVNFGT--LMKGFCDNGDLDGAYQLFKRV-DE 593
Query: 215 KIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + T M+ A + + + A ++++ + E G + Y ++ CK
Sbjct: 594 QYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNIN 653
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L +E+G IP R + C K + E ++ ++ KG++ + +++
Sbjct: 654 SGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE--VVNTIF 711
Query: 333 EYYCSNRQIDKAIALHIKIEKL--KGSLDVATYDVLLDGL 370
E ++++ + A I +E L KG + Y++L DG+
Sbjct: 712 E---ADKK--EVAAPKIVVENLMKKGHITYFAYEILHDGI 746
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 59/317 (18%), Positives = 122/317 (38%), Gaps = 38/317 (11%)
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF--KRACDEKIE 217
+Y+K + + V+K+ KH L +I+KL G+ A E + R +
Sbjct: 15 KYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGL 74
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL------------ 265
L+ G M + ++G+++EA+ ++ + Y A +N+L
Sbjct: 75 LEGVYIGAM-RNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKV 133
Query: 266 -----------------------CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
C+ +P LL ++ +G A+ +
Sbjct: 134 YMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYE 193
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+ E EL +L G+ D + L+ C + ++ L K+ K S ++ T
Sbjct: 194 ENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFT 253
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
++ + G + + EA+R+ D + ++ ++ LC ++ +A +M+
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313
Query: 423 MGHKPDEATYKQVISGF 439
G++PD TY +I G+
Sbjct: 314 EGYEPDGFTYNSIIDGY 330
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 182/441 (41%), Gaps = 50/441 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P A AL+D RQ + A + M+ GV N FT++ + + +C+ G E
Sbjct: 336 GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA 395
Query: 102 LGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL+ I + YN +I+ Y K+ + D L+EM NL P T I++
Sbjct: 396 DALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM-KKSNLVPTAYTCGMIIN 454
Query: 157 GARRYEKTEVSDRIVGLMV----------------------------------EKKLLPK 182
G R+ E + R+ +MV +KK +
Sbjct: 455 GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514
Query: 183 HFLSGNDYVI----QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L N +I + + K Y EMI +R + T G ++ K G ++
Sbjct: 515 DVLCYNSVIIGLCKSRKMEEAKDYLVEMI-ERGLKPNVY----TYGALIHGYCKSGEMQV 569
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + + + GI D A ++ CKE E + R ++ R P S +
Sbjct: 570 ADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIH 629
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
GK + ELLS L+KGL+ D F +S++ +C I KA LH + + S
Sbjct: 630 GLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
++ TY+ L++GL K G +E A +FD + + ++ ++ ++ C L KA +
Sbjct: 690 NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749
Query: 418 DEMLKMGHKPDEATYKQVISG 438
DEM G PD Y +I G
Sbjct: 750 DEMTLKGVPPDSFVYSALIDG 770
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 187/430 (43%), Gaps = 45/430 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ + +G F + + + ++M G P V N+++ L + ++ A M+
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
G+ PN +T+ + C+SG+ +V +L GI + V+ +ID Y K+G
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE 604
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A M GR++ P TYS+++ G R K + + ++ +EK L+P F
Sbjct: 605 ATSIFRCML-GRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF------ 657
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
T ++ K+G + +A Q++ + ++G
Sbjct: 658 -------------------------------TYNSIISGFCKQGGIGKAFQLHEYMCQKG 686
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I+ Y A +N LCK + E L + +G A+ + + C G +
Sbjct: 687 ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAF 746
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + KG+ DSF S+L++ +KA++L ++ + KG ++ + L+DG
Sbjct: 747 RLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ-KGFASTSSLNALMDGF 805
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G++ EA ++ + M + V ++ I++ C L++A + +M K P+
Sbjct: 806 CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865
Query: 430 ATYKQVISGF 439
TY ++SG+
Sbjct: 866 LTYTALLSGY 875
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 165/363 (45%), Gaps = 15/363 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V N+++ +Q I A L+ M + G+SPN T++ + LC++G+ E
Sbjct: 651 GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710
Query: 102 LGLLDSGI------YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
L D GI +++V Y +ID Y K G+ AF +EM + + P YS+++
Sbjct: 711 RELFD-GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM-TLKGVPPDSFVYSALI 768
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--DYVIQKLSDMGKTYAAEMIFKRACD 213
DG R+ TE + + L +E + K F S + + ++ GK A + + D
Sbjct: 769 DGCRKEGNTE---KALSLFLES--VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVD 823
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ ++ T ++ K G +KEA Q + + +R + Y A ++ + E
Sbjct: 824 KHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSE 883
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ L +++ + P + S + + +G + +L+ +L KG + C L++
Sbjct: 884 MFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLID 943
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + + + + KIE+ +L +AT L+ K G+M+ A R+ M K V
Sbjct: 944 PLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVP 1003
Query: 394 SSS 396
S+
Sbjct: 1004 DST 1006
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 181/431 (41%), Gaps = 44/431 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L++D Y KGLF + + + + GFV + CN LL L + N++ L Y M+
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFG 129
V + +T++ + R+G + ++ + + G S V YN+VI + G+
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF+ L ++ + + L TYS ++DG + ++ + ++ M K L P H
Sbjct: 289 EAFE-LKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV----- 342
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
Y A ++ ++G EA ++ + R
Sbjct: 343 -----------AYTA---------------------LIDGFMRQGDSGEAFRVKEEMLAR 370
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + Y A V +CK E+ LL +++ G P + + + V
Sbjct: 371 GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++LLS + L+ ++ C ++ C + I+ A + + L + Y L+ G
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
++GR +EAVRI M + V + V+ LC +++ +A EM++ G KP+
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550
Query: 429 EATYKQVISGF 439
TY +I G+
Sbjct: 551 VYTYGALIHGY 561
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 148/341 (43%), Gaps = 32/341 (9%)
Query: 113 VMYNLVIDFYSKKGDFGAAFD-RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
V++ L+ID Y KKG F A L NG G + +L + K E+ R
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNG--FVVGLLCCNGLLSDLLKANKLELFWRFY 224
Query: 172 GLMVEKK----------LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
M+E L+ HF +GN + GK EM ++ C +
Sbjct: 225 NGMLEANVLHDVYTYTHLINAHFRAGN-------AKEGKRLLFEME-EKGCSPSLV---- 272
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L + G V EA ++ L+ ++G+ Y ++ K+ + E +L ++
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM 332
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G P + + + +G E + +L +G+ L+ F ++L++ C +
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK----VVSSSSF 397
+KA AL ++ + D TY+ +++G K+ + R+ D + E+K V ++ +
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKE---QNTSRVKDLLSEMKKSNLVPTAYTC 449
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++++ LC + A + + M+ +G KP+ Y +I G
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 3/220 (1%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C +L L K +++ + Y+ + E + Y +N + +E LL ++
Sbjct: 204 CNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEME 263
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E+G P + + + C G+ E EL + KGL+ D F S L++ + ++
Sbjct: 264 EKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCT 323
Query: 343 KA-IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIV 400
+A + L K VA Y L+DG + G EA R+ + M V ++ ++ +
Sbjct: 324 EAKLMLEEMFSKGLKPGHVA-YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNAL 382
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
V +C ++ KA +EM+ +G KPD TY +I G++
Sbjct: 383 VKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYL 422
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 125/299 (41%), Gaps = 33/299 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y G ++ M + G P +AL+D ++ A L+ V+
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 76 DGVSPNKFTWSLVAQI--LCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
G + T SL A + C+SGK +++ ++D + V Y ++ID++ K G
Sbjct: 790 KGFAS---TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFL 846
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKK------ 178
A +M RNL P TY+++L G RR E + D ++ +E
Sbjct: 847 KEAEQFFVDM-QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
++ H G+ KL D +M+ K + + C ++ L ++ V E
Sbjct: 906 MIDAHLKEGDHVKTLKLVD-------DMLKKGG-----NVSKNVCHVLIDPLCRKEHVSE 953
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+++ I E+G+ + + V K + + +L+ +V ++P + EL+ +
Sbjct: 954 VLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 183/400 (45%), Gaps = 13/400 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + + L++ L + + A L MV G P++ T+ V LC+SG + L L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I +SV+ Y++VID K G F A NEM + + TYSS++ G
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLC 291
Query: 160 RYEKTEVSDRIVGLMVEKKLLPK--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K + +++ M+ + ++P F + D +++ GK A+ ++ I
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE----GKLLEAKELYNEMITRGIA 347
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ KE + EA Q++ L+ +G Y +N CK + ++ L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
R++ +G IP + + V C GK +EL ++ +G+ L++ C
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
N +++KA+ + K++K + +L + Y++++ G+ ++++A +F + + V +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +++ LC L +A +M + G PD+ TY +I
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 172/388 (44%), Gaps = 31/388 (7%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVIDFYS 123
L+ +M++ P ++ + + R+ ++++VLG L+ + ++I+ Y
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFS----TYSSILDG----ARRYEKTEVSDRIVGLMV 175
+K AF L GR G+ T+S++++G R E + DR MV
Sbjct: 117 RKKKLLFAFSVL-----GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR----MV 167
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E K P L +I L G+ A ++ R + + + T G +L L K G
Sbjct: 168 EMKQRPD--LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ ++ + ER I Y ++ LCK+ ++ L ++ +G + S
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C GKW + ++L ++ + ++ D S+L++ + ++ +A L+ ++
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELR 411
+ D TY+ L+DG K+ + EA ++FD M E +V+ S I+++ C K +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS---ILINSYCKAKRVD 402
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ E+ G P+ TY ++ GF
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGF 430
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 164/369 (44%), Gaps = 9/369 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+D G F D L ++ M + G V ++L+ L + + + M+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
+ P+ T+S + + + GK E+ ++ GI ++ YN +ID + K+
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +++ ++ + P TYS +++ + ++ + R+ + K L+P + ++ N
Sbjct: 369 A-NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTL 426
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ GK AA+ +F+ + T G +L L G + +A++I+ + +
Sbjct: 427 VLG-FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T+ Y ++ +C + ++ L + ++G P + + + C KG E +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + + G D F + L+ + + ++ L +++ S D +T +++D +
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID-M 604
Query: 371 FKDGRMEEA 379
D R++++
Sbjct: 605 LSDRRLDKS 613
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ VN C E + E L+ +VE P + +S + C KG+ E L+ ++
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ G D ++ C + A+ L K+E+ V Y +++D L KDG +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 378 EAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A+ +F+ M E+K + + ++ ++ LC+ + K EM+ PD T+ +
Sbjct: 263 DALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 436 ISGFM 440
I F+
Sbjct: 322 IDVFV 326
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 88/241 (36%), Gaps = 36/241 (14%)
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+V +AI ++ + + D+ + + + Q + V G + + G ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C K K +L G D+ S+L+ +C ++ +A+AL ++ ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV----------------------- 391
K D+ T L++GL GR+ EA+ + D M E
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 392 -------------VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
S + IV+ LC A+ +EM G K D TY +I G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 439 F 439
Sbjct: 290 L 290
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 183/400 (45%), Gaps = 13/400 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + + L++ L + + A L MV G P++ T+ V LC+SG + L L
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I +SV+ Y++VID K G F A NEM + + TYSS++ G
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLC 320
Query: 160 RYEKTEVSDRIVGLMVEKKLLPK--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K + +++ M+ + ++P F + D +++ GK A+ ++ I
Sbjct: 321 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE----GKLLEAKELYNEMITRGIA 376
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ KE + EA Q++ L+ +G Y +N CK + ++ L
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 436
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
R++ +G IP + + V C GK +EL ++ +G+ L++ C
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
N +++KA+ + K++K + +L + Y++++ G+ ++++A +F + + V +
Sbjct: 497 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 556
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +++ LC L +A +M + G PD+ TY +I
Sbjct: 557 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 172/388 (44%), Gaps = 31/388 (7%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVIDFYS 123
L+ +M++ P ++ + + R+ ++++VLG L+ + ++I+ Y
Sbjct: 86 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 145
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFS----TYSSILDG----ARRYEKTEVSDRIVGLMV 175
+K AF L GR G+ T+S++++G R E + DR MV
Sbjct: 146 RKKKLLFAFSVL-----GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR----MV 196
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E K P L +I L G+ A ++ R + + + T G +L L K G
Sbjct: 197 EMKQRPD--LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ ++ + ER I Y ++ LCK+ ++ L ++ +G + S
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C GKW + ++L ++ + ++ D S+L++ + ++ +A L+ ++
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELR 411
+ D TY+ L+DG K+ + EA ++FD M E +V+ S I+++ C K +
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS---ILINSYCKAKRVD 431
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ E+ G P+ TY ++ GF
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGF 459
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 164/369 (44%), Gaps = 9/369 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+D G F D L ++ M + G V ++L+ L + + + M+
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 337
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
+ P+ T+S + + + GK E+ ++ GI ++ YN +ID + K+
Sbjct: 338 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +++ ++ + P TYS +++ + ++ + R+ + K L+P + ++ N
Sbjct: 398 A-NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTL 455
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ GK AA+ +F+ + T G +L L G + +A++I+ + +
Sbjct: 456 VLG-FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T+ Y ++ +C + ++ L + ++G P + + + C KG E +
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + + G D F + L+ + + ++ L +++ S D +T +++D +
Sbjct: 575 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID-M 633
Query: 371 FKDGRMEEA 379
D R++++
Sbjct: 634 LSDRRLDKS 642
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ VN C E + E L+ +VE P + +S + C KG+ E L+ ++
Sbjct: 172 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 231
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ G D ++ C + A+ L K+E+ V Y +++D L KDG +
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 291
Query: 378 EAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A+ +F+ M E+K + + ++ ++ LC+ + K EM+ PD T+ +
Sbjct: 292 DALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 436 ISGFM 440
I F+
Sbjct: 351 IDVFV 355
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 88/241 (36%), Gaps = 36/241 (14%)
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+V +AI ++ + + D+ + + + Q + V G + + G ++
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C K K +L G D+ S+L+ +C ++ +A+AL ++ ++
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV----------------------- 391
K D+ T L++GL GR+ EA+ + D M E
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 392 -------------VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
S + IV+ LC A+ +EM G K D TY +I G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318
Query: 439 F 439
Sbjct: 319 L 319
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 191/427 (44%), Gaps = 9/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++C+ GL V+ + G+VP L L + +I+ A + +V
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDFGA 130
G ++ ++ + LC+ G+ L LL D + VMYN +ID K
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AFD +EM + + ++P TYS+++ G K + + + M+ + + P + +
Sbjct: 244 AFDLFSEMVS-KGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF--NI 300
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ GK + +F + I+ T ++ V +A I++ +++ G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y +N CK + +E L +++ + IP + S + G+
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L+ + D+G+ + +S+++ C Q+DKAIAL K + D++TY +L+ GL
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Query: 371 FKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ G++E+A ++F D + + + ++ I++ C +A+ +M G PD
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540
Query: 430 ATYKQVI 436
TY+ +I
Sbjct: 541 KTYEIII 547
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 159/347 (45%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D++ + + A L+ MV G+SP+ T+S + C GK + + L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I ++ +N++++ + K G + +M + + P F TY+S++DG
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEG-KTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + I M + + P + +I + K A +FK + I
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPD--IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ LSK GR+ A+Q+ + +RG+ Y + ++ LCK HQ ++ LL
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++G+ P S + C GK ++ ++ +L KG LD + + +++ +C
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEG 519
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++A+AL K+E D TY++++ LFK + A ++ M
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 186/430 (43%), Gaps = 14/430 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SLV + H L++ + M G P + CN L++ + I A ++ +++
Sbjct: 94 SLVKSKHYHTVLYLS-----QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGA 130
G P+ T++ +++ LC G+ + D + + + Y +I K G+ A
Sbjct: 149 MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L + +G + P Y++I+D + + + + MV K + P +
Sbjct: 209 ALDLLQRV-DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPD--VVTYSA 265
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +GK A +F + E I+ T ++ A K+G++KE ++ ++ ++G
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + ++ C + + + + + G P S + C K+ E
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + K ++ D SSL++ + +I A+ L ++ ++ TY+ +LD L
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K ++++A+ + K+ S++ I++ LC +L A K +++L G+ D
Sbjct: 446 CKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDV 505
Query: 430 ATYKQVISGF 439
Y +I GF
Sbjct: 506 YAYTIMIQGF 515
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 14/280 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ + G +G V+ MM G P N+L+D E+ A ++ M
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
+ GV+P+ ++S++ C+ KF+ + L + I V Y+ +ID SK G
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV---EKKLLPKHFL 185
A +++M + R + P TY+SILD KT D+ + L+ +K P +
Sbjct: 417 SYALQLVDQM-HDRGVPPNICTYNSILDALC---KTHQVDKAIALLTKFKDKGFQPD--I 470
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I+ L GK A +F+ + L M++ EG EA+ +
Sbjct: 471 STYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSK 530
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ + G Y + L K+ + + LLR+++ RG
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 167/394 (42%), Gaps = 19/394 (4%)
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMY 115
+ N++ A L+ ++R +P F ++ + L +S + VL L + +
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118
Query: 116 NLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEV 166
NLV I+ + + G AF ++ P T++++ G + +
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILK-MGYVPDTITFTTLSKGLCLKGQIQQAFLF 177
Query: 167 SDRIVGLMVEKKLLPKHFLS-GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D++V L HF +I L +G+T AA + +R ++
Sbjct: 178 HDKVVALGF-------HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ ++ K V EA ++ + +GI+ Y A ++ C + ++ L ++
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + V + C GK KE + + ++ +G+ + +SLM+ YC ++++KA
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
++ + + + D+ +Y ++++G K + +EA+ +F M ++ ++ ++ L
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ A++ D+M G P+ TY ++
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V +A+ +++ + R T ++ + L K V L + + RG P + +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G + + +L G + D+ ++L + C QI +A H K+ L
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSSSSFVIVVSRLCHLKELR 411
D +Y L+ GL K G A+ R+ + + VV ++ ++ +C +K +
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT---IIDSMCKVKLVN 242
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A EM+ G PD TY +ISGF
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGF 270
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M Q D QS S++++ + F + + +++ M +P V ++L+D L +
Sbjct: 356 MAQGGVNPDIQS--YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKS 413
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL 105
I A L M GV PN T++ + LC++ + + + LL
Sbjct: 414 GRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 178/407 (43%), Gaps = 17/407 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EV+R M P V + N L+ R E+ A Y M + GV+P+ ++S + +
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307
Query: 93 CRSGKFEVV---------LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
GK + LGL+ G V+Y +VI + + G A +EM G
Sbjct: 308 STRGKMDHAAAYLREMKGLGLVPDG----VIYTMVIGGFCRAGSMSEALRVRDEMV-GLG 362
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY+++L+G + + ++ ++ M E+ + P L +I G
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD--LCTFTTLIHGYCRDGNFEK 420
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A +F +++ ++ + ++G + +A +++ + R I Y ++
Sbjct: 421 ALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C++ Q EE G L ++V +G +P M + + C G K+ ++ L ++ +L
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D ++L+ Y + A + +EK D TY+++++G + G MEEA R+F
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
M + +++ +++ ++A + HDEM+ G PD+
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 128/314 (40%), Gaps = 8/314 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ + G + L V M G +P V N LL+ L +Q+ + A L M
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
GV+P+ T++ + CR G FE L L D+ ++ V YN +ID +KGD
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + ++M + R + P TYS ++D + E + + MV K LP + +
Sbjct: 456 ANELWDDM-HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPN--IMTYNS 512
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ G + ++ + I T ++ KE + A +++++ +
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y +N ++ EE + + + G P + G KE
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAF 632
Query: 311 ELLSAVLDKGLLLD 324
+L ++ +G D
Sbjct: 633 QLHDEMMHRGFAPD 646
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 1/218 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +LK L K R +A +++ + + + + + C+ + EE +++
Sbjct: 229 TFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEM 288
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+RG P + S + +GK L + GL+ D + ++ +C +
Sbjct: 289 QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
+A+ + ++ L DV TY+ LL+GL K R+ +A + + MKE V +F +
Sbjct: 349 SEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTL 408
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ C KA++ D +L +PD Y +I G
Sbjct: 409 IHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDG 446
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I+ + K A F+ D ++ + +L ALS+ G A + Y L+
Sbjct: 91 DLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVLS 150
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
V V+ CK + ++ ++ ++ +R P + + + ++ G
Sbjct: 151 SDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDA 210
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L+ ++ +KGL +S+++ C +R+ DKA + +++ + DV ++++L+
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + G +EEA++ + M++ V SF ++ ++ A EM +G P
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 428 DEATYKQVISGF 439
D Y VI GF
Sbjct: 331 DGVIYTMVIGGF 342
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 105/243 (43%), Gaps = 3/243 (1%)
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G + AE ++ E+ T M+ + K +A + + +R + +
Sbjct: 136 GWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTH 195
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ + + L+ + +G P + + + C ++ + +E+ A+
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ 255
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD-GRME 377
+ D + L+ +C ++++A+ + ++++ + DV ++ L+ GLF G+M+
Sbjct: 256 CSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGKMD 314
Query: 378 EAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A MK L +V + +V+ C + +A++ DEM+ +G PD TY ++
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374
Query: 437 SGF 439
+G
Sbjct: 375 NGL 377
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 188/434 (43%), Gaps = 11/434 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V+ G PN T+ +V LC+ G ++ LL+ + V++N +ID K
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM + + P TYSS++ Y + + +++ M+EKK+ P L
Sbjct: 202 DDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN--LVTF 258
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK AE + I+ T ++ R+ +A Q++ +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + E+ L R++ RG + + + + G
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C+N +++KA+ + ++K + LD+ Y +++
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G+ K G++++ +F + LK V + ++ ++S LC + L++A +M + G
Sbjct: 439 GMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 427 PDEATYKQVISGFM 440
PD TY +I +
Sbjct: 498 PDSGTYNTLIRAHL 511
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 187/430 (43%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++C+ + L + M G+ P++ ++LL+ I A L MV
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ T++ + L K + L+D + V Y +V++ K+GD
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF+ LN+M + +++I+D +Y + + + M K + P +
Sbjct: 169 AFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS-- 225
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ A + ++KI T ++ A KEG+ EA +++ + +R
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + ++ + +V + P + + C + ++
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ D+ ++L++ + D A + ++ D+ TY +LLDGL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+G++E+A+ +FDYM++ ++ + + ++ +C ++ + G KP+
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 430 ATYKQVISGF 439
TY +ISG
Sbjct: 466 VTYNTMISGL 475
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 179/405 (44%), Gaps = 15/405 (3%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P++ N LL A+ + + L L M R G+S N +T++++ CR + + L
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 104 LLDSGIY-----SSVMYNLVIDFY---SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
LL + S V + +++ Y + D A D++ EM P T+++++
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM----GYRPDTITFTTLI 122
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + K + +V MV++ P G V+ L G A + + K
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYG--VVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
IE ++ +L K V +A+ ++ + +GI Y + ++ LC + +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL D++E+ P + + + + +GK+ E E+L ++ + + D F +SL+ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + ++DKA + + D+ TY+ L+ G K R+E+ +F M +V +
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ L H + A K +M+ G PD TY ++ G
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG E++R M G V L+ L+ + A ++ MV DGV P+ T+S++
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 90 QILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC +GK E L + D S + +Y +I+ K G +D + + + +
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGV 461
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--NDYVIQKLSDMGKTY 202
P TY++++ G + + ++ M E LP SG N + L D K
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD---SGTYNTLIRAHLRDGDKAA 518
Query: 203 AAEMIFK-RAC 212
+AE+I + R+C
Sbjct: 519 SAELIREMRSC 529
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 192/442 (43%), Gaps = 46/442 (10%)
Query: 6 EGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+G D D +S V++ + +G Y M G +P V ++++ AL + +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLV 118
A + +MV++GV PN T++ + C SG+ + +G L G+ V+ YN +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+D+ K G A + M R L P +TY ++L G ++ LMV
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P H+ +F ++ A +K+G+V +
Sbjct: 370 IHPNHY----------------------VFS---------------ILICAYAKQGKVDQ 392
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ ++ + ++G+ Y + +LCK + E+ +++ P + + +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
S C KW + +EL+ +LD+G+ LD+ +S+++ +C ++ ++ L + ++
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D+ TY L+DG G+M+EA ++ M + + ++ +++ C + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G PD TY ++ G
Sbjct: 573 REMESSGVSPDIITYNIILQGL 594
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 167/375 (44%), Gaps = 11/375 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSG--IYSSVMYNLVIDFYSKK 125
M + G PN F+++++ + LC + + L LL D G V Y VI+ + K+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
GD A+ +EM + R + P TYSSI+ + + + + ++ MV+ ++P
Sbjct: 213 GDLDKAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN--C 269
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ G+ A K+ + +E T ++ L K GR EA +++
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+++RG+ + Y + + E+ GLL +V G P S + + +GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + S + +GL D+ +++ C + +++ A+ ++ + S Y+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ L + ++A + M + + + + F ++ C + ++ K D M+++G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 425 HKPDEATYKQVISGF 439
KPD TY +I G+
Sbjct: 510 VKPDIITYSTLIDGY 524
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C GR L GF+ +++ R + + + GL +K+ D V+++++ +
Sbjct: 103 CAGR-LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS-----DAMDIVLRRMTQL 156
Query: 199 G---KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G ++ ++ K CDE R +EA+++ ++ + G
Sbjct: 157 GCIPNVFSYNILLKGLCDEN-------------------RSQEALELLQMMPDDGGDCPP 197
Query: 256 S--DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N KE ++ G ++++RG +P + S +A+ C + E+L
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++++ G++ + +S++ YCS+ Q +AI K+ DV TY+ L+D L K+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
GR EA ++FD M K G KP+ TY
Sbjct: 318 GRCTEARKMFD----------------------------------SMTKRGLKPEITTYG 343
Query: 434 QVISGF 439
++ G+
Sbjct: 344 TLLQGY 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 168/422 (39%), Gaps = 46/422 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G + +++ M G P ++ LL + + L MVR+G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 78 VSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
+ PN + +S++ + GK + V + G+ +V Y VI K G A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M + R L+PG Y+S++ ++K
Sbjct: 430 RYFEQMIDER-LSPGNIVYNSLIHSLCIFDKW---------------------------- 460
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D K EM+ + C + I ++ + KEGRV E+ +++ L+ G+
Sbjct: 461 ----DKAKELILEMLDRGICLDTIFFNS-----IIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C + +E LL +V G P + + + C + ++ L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ G+ D + +++ R+ A L++ I + L+++TY+++L GL K
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 373 DGRMEEAVRIFDY--MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ +EA+R+F + +L+ + + +F I++ L + +A + G PD
Sbjct: 632 NNLTDEALRMFQNLCLTDLQ-LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 431 TY 432
TY
Sbjct: 691 TY 692
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 138/315 (43%), Gaps = 8/315 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+++ Y+ +G + V+ MR G P ++ L + + A + M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+ +SP ++ + LC K+ E++L +LD GI ++ +N +ID + K+G
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ ++L ++ + P TYS+++DG K + + +++ MV + P +
Sbjct: 497 ES-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY--N 553
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + + A ++F+ + T +L+ L + R A ++Y I+E
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + S Y ++ LCK + +E + +++ + + + G+ E
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 310 EELLSAVLDKGLLLD 324
++L +A+ GL+ D
Sbjct: 674 KDLFAALSANGLVPD 688
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++D+ ++ + + L+ MVR GV P+ T+S + C +GK + LL S +
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V YN +I+ Y K A EM ++P TY+ IL G + +T
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 166 VSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + VG+ L LS + ++ L T A +F+ C ++L+ T
Sbjct: 602 AAKELYVGITESGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
M+ AL K GR EA ++ +S G+ V D Y+ +
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGL-VPDVRTYSLM 695
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI-KIEKL 354
+ S C G+ L V+ KG +D+ + L++ C++++ A+ + + ++ +L
Sbjct: 97 LIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL 156
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LKVVSSSSFVIVVSRLCHLK 408
+V +Y++LL GL + R +EA+ + M + VV S+ V++
Sbjct: 157 GCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEG 213
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L KA + EML G P+ TY +I+
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 190/434 (43%), Gaps = 11/434 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 119 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 178
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V+ G PN T+ +V LC+ G ++ L LL+ + V++N +ID K
Sbjct: 179 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 238
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM + + P TYSS++ Y + + +++ M+EKK+ P L
Sbjct: 239 DDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN--LVTF 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK AE ++ I+ T ++ R+ +A Q++ +
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 355
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + E+ L R++ RG + + + + G
Sbjct: 356 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 415
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C+N +++KA+ + ++K + LD+ Y +++
Sbjct: 416 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 475
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G+ K G++++ +F + LK V + ++ ++S LC + L++A +M + G
Sbjct: 476 GMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 534
Query: 427 PDEATYKQVISGFM 440
P+ TY +I +
Sbjct: 535 PNSGTYNTLIRAHL 548
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 187/430 (43%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++C+ + L + M G+ P++ ++LL+ I A L MV
Sbjct: 86 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ T++ + L K + L+D + V Y +V++ K+GD
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + LN+M + +++I+D +Y + + + M K + P +
Sbjct: 206 ALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS-- 262
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ A + ++KI T ++ A KEG+ EA ++Y + +R
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + VN C + ++ + +V + P + + + C + ++
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ D+ ++L++ + D A + ++ D+ TY +LLDGL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+G++E+A+ +FDYM++ ++ + + ++ +C ++ + G KP+
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502
Query: 430 ATYKQVISGF 439
TY +ISG
Sbjct: 503 VTYNTMISGL 512
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 167/415 (40%), Gaps = 50/415 (12%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL--------LDSGIYSSVMYNLVID 120
L+G MV+ P+ ++ + + + KF+VV+ L + G+Y+ YN++I+
Sbjct: 34 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT---YNILIN 90
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ ++ A L +M P T SS+L+G ++ + +V MVE
Sbjct: 91 CFCRRSQISLALALLGKMMK-LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 149
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P +I L K A + R + T G ++ L K G A+
Sbjct: 150 PDTITFTT--LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + + I + ++ LCK ++ L +++ +G P + S ++
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267
Query: 301 CGKGKWKEVEELLSAVLDKGL---------LLDS-------------------------- 325
C G+W + +LLS +++K + L+D+
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
F +SL+ +C + ++DKA + + DV TY+ L+ G K R+E+ +F
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M +V + ++ ++ L H + A K +M+ G PD TY ++ G
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 184/416 (44%), Gaps = 41/416 (9%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D S LS ++ Y + + + ++V+ MRV GF P + AC LL++L +
Sbjct: 133 DVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWK 192
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYS 123
+Y MV+ GV N ++++ C+SG E +L V YN +I Y
Sbjct: 193 IYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYC 252
Query: 124 KKGDFGAAF---DRL------------NEMCNG-----------------RNLTPGFSTY 151
KKG A DR+ N + G +++TP TY
Sbjct: 253 KKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHVTY 312
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+S++DG R + + R+ +M EK L P ++ N +++KL + G+ A ++
Sbjct: 313 TSLIDGYCRVNDLDEALRLKEVMSEKGLYPT-VITYNS-ILRKLCEGGRLRDANILLNEM 370
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ KIE + TC ++ A K G ++ A+++ + G+ + Y A ++ CK +
Sbjct: 371 SERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEI 430
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LL +++ G+ P S V S C + + V +L ++ +GL +D +L
Sbjct: 431 DKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRAL 490
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +C +ID A + + + K KG D Y L G +K G++ I D M
Sbjct: 491 IRRFCKIEKIDCAQRV-LGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEM 545
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EAIQ++ + G +N L K+ + V + + +V+ G + + +
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLL 213
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ C G ++ E++LS + K + D F ++L+ YC +A+++ ++E S
Sbjct: 214 HACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGIS 273
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNH 417
D+ TY+ L+ G ++GRM EAV++F +K++ + ++ ++ C + +L +A++
Sbjct: 274 PDIFTYNSLIYGFCREGRMREAVQLFRDIKDV-TPNHVTYTSLIDGYCRVNDLDEALRLK 332
Query: 418 DEMLKMGHKPDEATYKQVI 436
+ M + G P TY ++
Sbjct: 333 EVMSEKGLYPTVITYNSIL 351
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L A K G V++A ++ + + + Y +++ CK+ E + + G
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C +G+ +E +L + K + + +SL++ YC +D+A+
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEAL 329
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L + + V TY+ +L L + GR+ +A + + M E K+ + + +++
Sbjct: 330 RLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAY 389
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + ++R A+K D+M+ G K D+ TYK +I GF
Sbjct: 390 CKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGF 424
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 190/434 (43%), Gaps = 11/434 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H D + + M G+ P L+ L+ N+ A L M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V+ G PN T+ +V LC+ G ++ L LL+ + V++N +ID K
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM + + P TYSS++ Y + + +++ M+EKK+ P L
Sbjct: 277 DDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN--LVTF 333
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK AE ++ I+ T ++ R+ +A Q++ +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + E+ L R++ RG + + + + G
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C+N +++KA+ + ++K + LD+ Y +++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G+ K G++++ +F + LK V + ++ ++S LC + L++A +M + G
Sbjct: 514 GMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 427 PDEATYKQVISGFM 440
P+ TY +I +
Sbjct: 573 PNSGTYNTLIRAHL 586
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 187/430 (43%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++C+ + L + M G+ P++ ++LL+ I A L MV
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ T++ + L K + L+D + V Y +V++ K+GD
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + LN+M + +++I+D +Y + + + M K + P +
Sbjct: 244 ALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS-- 300
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ A + ++KI T ++ A KEG+ EA ++Y + +R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + VN C + ++ + +V + P + + + C + ++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ D+ ++L++ + D A + ++ D+ TY +LLDGL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+G++E+A+ +FDYM++ ++ + + ++ +C ++ + G KP+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 430 ATYKQVISGF 439
TY +ISG
Sbjct: 541 VTYNTMISGL 550
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 167/415 (40%), Gaps = 50/415 (12%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL--------LDSGIYSSVMYNLVID 120
L+G MV+ P+ ++ + + + KF+VV+ L + G+Y+ YN++I+
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT---YNILIN 128
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ ++ A L +M P T SS+L+G ++ + +V MVE
Sbjct: 129 CFCRRSQISLALALLGKMMK-LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P +I L K A + R + T G ++ L K G A+
Sbjct: 188 PDTITFTT--LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + + I + ++ LCK ++ L +++ +G P + S ++
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 301 CGKGKWKEVEELLSAVLDKGL---------LLDS-------------------------- 325
C G+W + +LLS +++K + L+D+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
F +SL+ +C + ++DKA + + DV TY+ L+ G K R+E+ +F
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M +V + ++ ++ L H + A K +M+ G PD TY ++ G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 196/433 (45%), Gaps = 46/433 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+L+L + G ++++ MM+ +P + N +++ L + + A L+ M
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFG 129
PN T+S + C++G E GLL+ G+ V +Y+ +I + KGD
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ NEM +N+TP TYS +++ + +K + + +++ M K+ P D
Sbjct: 252 RGKELFNEMLR-KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRP-------D 303
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V + + LSK GR +AI++ L+ +R
Sbjct: 304 VVAYTV------------------------------LADGLSKNGRASDAIKVLDLMVKR 333
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + Y A +N LCKE + ++ G+L + ++G P + S V CG GK E
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 310 EELLSAVLDKGLLL--DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+LL+ ++ K + D F + +++ C R++ A ++ + + ++ TY++L+
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453
Query: 368 DGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG G++ +A+ ++ D + +++++ ++++ LC ++ L A ++ G +
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTR 513
Query: 427 PDEATYKQVISGF 439
P + Y +++
Sbjct: 514 PTVSEYNTLMASL 526
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 186/437 (42%), Gaps = 11/437 (2%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
S S ++D + G +G + M G V +AL+ + +I L+
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKK 125
M+R V+PN T+S + LC+ K++ +LD+ V Y ++ D SK
Sbjct: 258 NEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKN 317
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A L+ M R P TY++I++G + + + + I+ M +K P +
Sbjct: 318 GRASDAIKVLDLMVK-RGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPD--V 374
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG--CMLKALSKEGRVKEAIQIY 243
+++ L +GK A + ++ ++ D +++ L K+ R++ A ++Y
Sbjct: 375 VTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVY 434
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + ERG Y ++ + + L +D V+ G P A + + C
Sbjct: 435 YTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKM 494
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+ L + G ++LM C +++A L ++ DV ++
Sbjct: 495 QMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSF 554
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
++++DG K G +E A + M + +V + +F I+++R L +L +A ++ M+
Sbjct: 555 NIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVS 614
Query: 423 MGHKPDEATYKQVISGF 439
GH PD + ++ G+
Sbjct: 615 CGHVPDAVLFDSLLKGY 631
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 175/417 (41%), Gaps = 46/417 (11%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ V+ M P ++ +AL+++ + A + G +++ G N + ++L+ +
Sbjct: 79 ISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKG 138
Query: 92 LCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C+SG + L + I V YN VI+ K A + EM G P
Sbjct: 139 FCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKP 197
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
T+S+++DG + K + GL+ E + K L G+ +V Y+A
Sbjct: 198 NSVTFSALIDG---FCKNGDVEEGFGLLEE---MEKMGLEGDVFV----------YSA-- 239
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
++ +G ++ ++++ + + +T Y +N LC
Sbjct: 240 -------------------LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALC 280
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K+ + +E +L + P + + G+ + ++L ++ +G ++
Sbjct: 281 KKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV 340
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++++ C ++D A+ + + K DV TY L+ GL G+++EAV + + +
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400
Query: 387 --KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
KE + +F +V+ LC + LR A + + M++ G + TY +I G++
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYL 457
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/435 (19%), Positives = 176/435 (40%), Gaps = 42/435 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++ + KG G E++ M P V + L++AL ++ + + A+ + M
Sbjct: 238 SALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTG 297
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGA 130
V P+ ++++A L ++G+ + +LD + ++V YN +I+ K+G
Sbjct: 298 CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDD 357
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L M + P TYS+++ G K + + ++ L++ K+ K + +
Sbjct: 358 ALGILETMAK-KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VIQ+L + A+ ++ + T ++ G++ +A++++ + G
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG 476
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I+ + Y +N LCK GL G P E + +AS C + ++
Sbjct: 477 ISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQAR 536
Query: 311 ELL---------------SAVLDKGL--------------------LLDSFCCSSLMEYY 335
L + ++D L + D+ S L+ +
Sbjct: 537 NLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRF 596
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
Q+D+A +L+ ++ D +D LL G G+ E+ V + M + VV S
Sbjct: 597 LKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDS 656
Query: 396 SFV-IVVSRLCHLKE 409
+++ LC++ +
Sbjct: 657 KLTSTILACLCNMSK 671
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/213 (17%), Positives = 91/213 (42%), Gaps = 3/213 (1%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
+C ++ L K I ++ ++ + + A + +P G+L +
Sbjct: 61 SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLI 120
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
++RG+ + + C G + +L + L+ D ++++ C +++
Sbjct: 121 MKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRL 180
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV--I 399
+A L +++ + + T+ L+DG K+G +EE + + M+++ + FV
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG-LEGDVFVYSA 239
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
++S C ++ + + +EML+ P+ TY
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTY 272
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 199/471 (42%), Gaps = 69/471 (14%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + + G +P+V A N +L L ++ + A + M +D +PN
Sbjct: 348 YGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APN 406
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC++G+ E + D+ G++ +VM N++ID K +L+
Sbjct: 407 LSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKA-------KKLD 459
Query: 137 EMC------NGRNLTPGFSTYSSILDGA----------RRYEKTEVSDRIVGLMVEKKLL 180
E C N + +P T+ S++DG R YE+ SD+I +V L+
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLI 519
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------- 229
F G + G EMI R C + L + C+ KA
Sbjct: 520 KSFFKCGR-------KEDGHKIFKEMI-HRGCSPDLRLLNAYMDCVFKAGETGKGRALFE 571
Query: 230 --------------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
L K G +E ++++ + E+G + Y F++ CK
Sbjct: 572 EIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSG 631
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ + LL ++ +G P + + + E L GL L+ S
Sbjct: 632 KVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYS 691
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
SL++ + +ID+A + ++ + + +V T++ LLD L K + EA+ F MK L
Sbjct: 692 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNL 751
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K + ++ I+++ LC +++ KA EM K G KP+ TY +I+G
Sbjct: 752 KGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGL 802
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 199/463 (42%), Gaps = 53/463 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++ +DC+ G + + ++ +G +P +++ L + N + A ++ M +
Sbjct: 272 NVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQ 331
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ P + ++ + +GKF+ LL+ I S + YN ++ KKG G
Sbjct: 332 NRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGE 391
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM ++ P STY+ ++D + + E + ++ M E L P + +
Sbjct: 392 ALRTFEEM--KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPN--VMTVNI 447
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC-MLKALSKEGRVKEAIQIYHLISE- 248
+I +L K A IF+ + KI D+ C ++ L K+GRV +A ++Y + +
Sbjct: 448 MIDRLCKAKKLDEACSIFE-GMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 249 ----------------------------------RGITVRDSDYYAFVNVLCKEHQPEEV 274
RG + A+++ + K + +
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ RG+IP M S + G +E EL A+ ++G +LD+ ++ ++
Sbjct: 567 RALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDG 626
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELK 390
+C + +++KA L +++ V TY ++DGL K R++EA +F+ K EL
Sbjct: 627 FCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELN 686
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
VV SS + ++ + E M +E+++ G P+ T+
Sbjct: 687 VVIYSSLIDGFGKVGRIDEAYLIM---EELMQKGLTPNVYTWN 726
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 179/442 (40%), Gaps = 21/442 (4%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + L+L C L +G ++ + MR + F PA SA L+ AL E + L
Sbjct: 162 STKTCIELILSCIKSNKL-REGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTL 220
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSK 124
+ M G + ++ V ++ R G+ + L LLD + V+YN+ ID + K
Sbjct: 221 FHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGK 280
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL----DGARRYEKTEVSDRIVGLMVEKKLL 180
G A+ +E+ L P TY+S++ G R E E+ ++ M + + +
Sbjct: 281 AGKVDMAWKFFHEI-KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQ----MEQNRNV 335
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + +I GK A + +R C+L L K+GR+ EA+
Sbjct: 336 PCAY--AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEAL 393
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + + ++ S Y +++LCK + E + + E G P M ++ +
Sbjct: 394 RTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRL 452
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C K E + + K D SL++ ++D A L+ ++ +
Sbjct: 453 CKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA 512
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK--ELRKAMKNHD 418
Y L+ FK GR E+ +IF M + S ++ C K E K +
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIH-RGCSPDLRLLNAYMDCVFKAGETGKGRALFE 571
Query: 419 EMLKMGHKPDEATYKQVISGFM 440
E+ G PD +Y +I G +
Sbjct: 572 EIKSRGFIPDVMSYSILIHGLV 593
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 159/371 (42%), Gaps = 20/371 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++++ M G P + NA +D +++ E L+ + G P+ ++S++
Sbjct: 530 DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILI 589
Query: 90 QILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRN 143
L ++G +E+ + + G + + YN ID + K G A+ L EM GR
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ 649
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MG 199
P TY S++DG + ++ D L E K + L N + L D +G
Sbjct: 650 --PTVVTYGSVIDGLAKIDRL---DEAYMLFEEAK---SNGLELNVVIYSSLIDGFGKVG 701
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A +I + + + T C+L AL K + EA+ + + T Y
Sbjct: 702 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYS 761
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N LC+ + + +++ ++G P + + +A G E L
Sbjct: 762 ILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKAN 821
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEE 378
G + DS ++++E +R+ +A + + ++KG ++ T LLD L KD +E+
Sbjct: 822 GGVPDSASYNAIIEGLSYSRRAMEAYKI-FEETRMKGCNIHTKTCIALLDALQKDECLEQ 880
Query: 379 AVRIFDYMKEL 389
A + ++E+
Sbjct: 881 AAIVGAVLREI 891
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 171/387 (44%), Gaps = 13/387 (3%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ A + ++D + G L VYR+M G P N L++A + + L+
Sbjct: 89 ASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFE 148
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKG 126
M SPN T+S++ +C+ G E V L + G ++ Y +ID K G
Sbjct: 149 EMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSG 208
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH--F 184
AF EM + L Y+S++ G R + + + ++ M+ K L P H F
Sbjct: 209 HVDKAFFLFEEMTS-EGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
S ++ L G+ A IF+ A D L + ++ L K R+ EA +I+
Sbjct: 268 TS----LVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG 323
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ E G+ + A ++ LCK + + LL D+ G P + + G
Sbjct: 324 ELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSG 383
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E +LL + G D ++L++ C +I+ A+ L +I KG + TY+
Sbjct: 384 RVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISA-KGFANTVTYN 442
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKV 391
+L+GL GR++EA ++F+ MK+ V
Sbjct: 443 TILNGLCMAGRVDEAYKLFNGMKQETV 469
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 191/426 (44%), Gaps = 12/426 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ GL +E + M + SA N+L+DA + + A +Y M + G+ P+
Sbjct: 64 YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLN 136
+T++++ ++ + + V L + + + Y+++ID K G A
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M R P TY+S++DG + + + + M + L+ + + +I L
Sbjct: 184 DM-KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS--LIHGLG 240
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G+ AA +F+ + ++ T ++ L GR EA +I+ + G + +
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ LCK + +E + ++ E G +P + + C G+ + LL +
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G D ++L++ + ++++A L ++++ L DV TY+ L+D K GR+
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD----EMLKMGHKPDEATY 432
E+A+R+F+ + ++ ++ +++ LC + +A K + E + PD TY
Sbjct: 421 EDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480
Query: 433 KQVISG 438
+++G
Sbjct: 481 TTLLNG 486
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 167/417 (40%), Gaps = 41/417 (9%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP+V AC L++ L + K + L +I +
Sbjct: 14 GGVPSVRACTTLVEMLGIARR-------FNEAEEVLAEVEKSRYILQPRIFIELARGYAS 66
Query: 102 LGLLDSGI------------YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
GLL+ + ++ YN +ID + K G A M L P
Sbjct: 67 AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQS-GLRPDTY 125
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF- 208
T++ +++ ++ ++ + ++ M + P +I + G A +F
Sbjct: 126 TFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITY--SILIDAVCKCGGVEKALKVFL 183
Query: 209 ---KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
R C I T M+ L K G V +A ++ ++ G+ Y + ++ L
Sbjct: 184 DMKSRGCRPNIF----TYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + + L R+++ +G P + + V G+ E + D G LD
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ L++ C ++++D+A + ++E+ DV T++ L+DGL K GR+ +A F
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA---FIL 356
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD------EMLKMGHKPDEATYKQVI 436
+ ++K + V V + L + LRK+ + + EM +G++PD TY +I
Sbjct: 357 LGDMKRAGCTPDVTVYNTL--IDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 17 LVLDCYSHKGLFMDGL-------EVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLA 66
LV D Y+ L MDGL + + + M+ G P V+ N L+D L + + A
Sbjct: 330 LVPDVYTFNAL-MDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFY 122
L M G P+ T++ + C+ G+ E L L + G ++V YN +++
Sbjct: 389 GQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGL 448
Query: 123 SKKGDFGAAFDRLN----EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
G A+ N E +G + P F TY+++L+GAR+ +E+++ +
Sbjct: 449 CMAGRVDEAYKLFNGMKQETVDGV-IDPDFVTYTTLLNGARQAGLSELANSL 499
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 199/430 (46%), Gaps = 21/430 (4%)
Query: 25 KGLFM-----DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KG++M D ++++ M G L++ L + + LA L+ M +
Sbjct: 85 KGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCK 143
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ FT+ ++ LC+ G L + I + ++ ++V+ YS D F RL E
Sbjct: 144 GDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVV--YSSLMDGLCRFGRLKEAL 201
Query: 140 N------GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
GR ++ TY+S++ G R + + LMV++ P F +I
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF--TILID 259
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
L GK A+ I + + E T ++ L G++++A +++ +++RGI +
Sbjct: 260 GLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 319
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N CK+ + +E L ++ +G P + + + + C G+ + ++L
Sbjct: 320 NVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 379
Query: 314 SAVLDKG--LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ G L L ++C L++ C N +++AI L I+K + ++ + +LLDG+
Sbjct: 380 VEMQTCGQFLKLSTYCV--LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMC 437
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ G++EEA + FD + + + + ++ I+++ LC+ L +A+K +M + G PD
Sbjct: 438 RAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 497
Query: 431 TYKQVISGFM 440
T+ +I +
Sbjct: 498 TFNVIIQNLL 507
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 176/377 (46%), Gaps = 10/377 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++D G+ + L+++ M G +P V ++L+D L R ++ A + M
Sbjct: 151 MIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 210
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAA 131
G+S + +T++ + L R+G ++ V L D G + + ++ID K+G G A
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
++ E+ + + P TY+++++G + E + ++ + ++ + F + +
Sbjct: 271 -QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF--SYNIL 327
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I K A +F+ + ++ T ++ AL + GRV+ A +++ + G
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
++ S Y ++ LCK EE L + + + + P S + C GK +E +
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGL 370
+ GL D+ + L+ C+ + +A+ L ++E+ KG L D T++V++ L
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE-KGCLPDSITFNVIIQNL 506
Query: 371 FKDGRMEEAVRIFDYMK 387
K+ + EA+++ + M+
Sbjct: 507 LKENEIHEAIQLLEEMR 523
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 154/366 (42%), Gaps = 26/366 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D G + LE ++ M G V N+L+ L R + + MV
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGA 130
G SP+ FT++++ LC+ GK +L+ G ++ YN +++ G
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +L E R + +Y+ +++G + +K + + R+ M K L P +
Sbjct: 305 A-TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTY--NT 361
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK---------ALSKEGRVKEAIQ 241
+I L G+ A+ +F +E+Q TCG LK L K G ++EAI
Sbjct: 362 LIGALCQSGRVRTAQKLF-------VEMQ--TCGQFLKLSTYCVLLDGLCKNGHLEEAID 412
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ I + + ++ +C+ + EE ++ + G P + + + C
Sbjct: 413 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 472
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
KG E +LL + +KG L DS + +++ +I +AI L ++ S D A
Sbjct: 473 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 532
Query: 362 TYDVLL 367
+LL
Sbjct: 533 VTSMLL 538
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++K + E + +A+Q++ ++E+G+ Y +N LCK + GL +
Sbjct: 79 TVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARK----TGLAIKL 134
Query: 282 VERGYIPCAMELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
E+ C ++ + + S C G E ++ S ++ G+L D SSLM+ C
Sbjct: 135 HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 194
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
++ +A+ ++E S DV TY+ L+ GL + G +E + M + + +F
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 254
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I++ LC ++ +A + + M G +PD TY +++G
Sbjct: 255 TILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGL 296
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKE-----VEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++RG+ P A+ ++ V KG W E +L + +KGL D+ L+ C
Sbjct: 69 LKRGFEPDAVTVTTLV-----KGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLC 123
Query: 337 SNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
R+ AI LH EK+KG+ DV TY +++D L KDG EA+ +F M ++
Sbjct: 124 KARKTGLAIKLH---EKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPD 180
Query: 395 SSFVIVVSR----LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+V S LC L++A++ EM G D TY +I G
Sbjct: 181 ---VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 226
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 130/356 (36%), Gaps = 41/356 (11%)
Query: 6 EGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
EGR +D + ++ S GL+ + +M GF P L+D L ++ ++
Sbjct: 208 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 267
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLV 118
A + M G P+ T++ + LC G+ E + L D GI +V YN++
Sbjct: 268 GEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 327
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG------ARRYEKTEVSDRIVG 172
I+ Y K AF RL E + L P TY++++ R +K V + G
Sbjct: 328 INGYCKDQKIDEAF-RLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 173 LMVE---------------------------KKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
++ KK K + ++ + GK A
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
F +E ++ L +G + EA+++ + E+G + + L
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
KE++ E LL ++ R + P S + +W L L KG+
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 190/407 (46%), Gaps = 21/407 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P V A NA++ + N+I A+ + M G P+ T++++ LC K + L
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204
Query: 104 ----LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LLD+ + + + Y ++I+ +G A L EM R L P TY++I+ G
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEML-ARGLLPDMYTYNAIIRGMC 263
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ E + ++ + K P +S N ++ Q D G+ AEM F R C
Sbjct: 264 KEGMVERAAELITSLTSKGCEPD-VISYNILLRAFLNQGKWDEGEKLVAEM-FSRGC--- 318
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
E T ++ +L + GR+ EAI + ++ E+ +T Y ++ LCKE + +
Sbjct: 319 -EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME-- 333
G++ ++ G +P + + +A+ C G + E+ + + G + ++++
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ C +R +A+ + + D TY+ L+ L +DG +EEA+ + D M++
Sbjct: 438 WSCGDRS--RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 495
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ IV+ LC ++ + A+ EM++ G +P+E TY +I G
Sbjct: 496 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 153/359 (42%), Gaps = 8/359 (2%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---- 99
+P V L++A + I A L M+ G+ P+ +T++ + + +C+ G E
Sbjct: 214 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 273
Query: 100 VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
++ L G V+ YN+++ + +G + + EM + R P TYS ++
Sbjct: 274 LITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFS-RGCEPNKVTYSILISSL 332
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
R+ + + + ++ +M+EK+L P + D +I L G+ A I
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTY--SYDPLISALCKEGRLDLAIGIMDYMISNGCLP 390
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+L AL K G +A++I++ + G S Y ++ L G++
Sbjct: 391 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 450
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ +G P + + ++ C G +E LL + G + ++ C
Sbjct: 451 PAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 510
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
R+ID AI + ++ + + TY +L++G+ G EA+ + + + V+S SF
Sbjct: 511 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSF 569
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L G LE++ +R G P VS+ N ++ AL+ + A + AM+ G
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAF 132
+ P++ T++ + LCR G E +GLLD SG +V+ YN+V+ K A
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRI 170
EM + P +TY +++G R E E+++ +
Sbjct: 518 GMFAEMIE-KGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
L + + C GK+ E L +++KG D C+ L++ + + + I+KA + ++I
Sbjct: 81 LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEIL 139
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELR 411
+ DV Y+ ++ G K ++E A ++ + MK + ++ I++ LC+ ++L
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVI 436
A+ D++L P TY +I
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILI 224
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 205/476 (43%), Gaps = 43/476 (9%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+C+G + ++ + G D ++++ M G P V N ++D L++
Sbjct: 247 ACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRF 306
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLV 118
A MVR V+P+ T+ ++ L + FE V++ + G + V++N +
Sbjct: 307 EEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNAL 366
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV------- 171
ID Y +KGD G A +EM + + P F T++++L G R + E +++++
Sbjct: 367 IDGYCRKGDMGEALRVRDEMAM-KGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Query: 172 -------------------GLMVEKKLLPKHFLSGNDYVIQKLSDM---------GKTYA 203
G + K++ K LSGN V L G + A
Sbjct: 426 LSVNMDVCSYVIHRLMERSGFVSALKIVTK-LLSGNIRVSDSLLTPLVVGLCKCEGHSEA 484
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
E+ FK A + + T +L L + G ++E ++ + E+G+ + Y +
Sbjct: 485 IELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIF 544
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
CK + EE L ++V++ + P + + GK +V LL + G +
Sbjct: 545 GCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVP 604
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ + + L+E YC +I+ A+ ++ K L Y++L+ + G + EA ++
Sbjct: 605 NVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLR 664
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
D MK ++ + +++ ++ +C + + +A + +EM G P+ Y +I G
Sbjct: 665 DAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGG 720
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 202/484 (41%), Gaps = 79/484 (16%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY-------------------- 70
+++ M G P + CN LL +L + NE+ + ++
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAINA 264
Query: 71 ---GAMVRD-----------GVSPNKFTWSLVAQILCRSGKFE----------------- 99
G V D GV PN T++ V L +SG+FE
Sbjct: 265 FCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPS 324
Query: 100 -VVLGLLDSGIYSSVMY----------------------NLVIDFYSKKGDFGAAFDRLN 136
V G+L SG+ M+ N +ID Y +KGD G A +
Sbjct: 325 VVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRD 384
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + + P F T++++L G R + E +++++ ++ L + YVI +L
Sbjct: 385 EMAM-KGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVN--MDVCSYVIHRLM 441
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI-YHLISERGITVRD 255
+ +A I + I + D ++ L K EAI++ + L + +G+
Sbjct: 442 ERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANT 501
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
A ++ LC+ EEV +L+ ++E+G + + + + C GK +E +L
Sbjct: 502 VTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEE 561
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ + D++ + LM+ +ID L + ++ +V TY +LL+G K R
Sbjct: 562 MVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADR 621
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+E+AV+ F + KV +SS + I+++ C + + +A K D M G P ATY
Sbjct: 622 IEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSS 681
Query: 435 VISG 438
+I G
Sbjct: 682 LIHG 685
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 154/353 (43%), Gaps = 17/353 (4%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
++R+M GFV A+ LL R ++ L + G +G S W
Sbjct: 437 IHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWF------- 489
Query: 94 RSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
K V GL + + S N ++ ++G+ F+ L +M + L +Y++
Sbjct: 490 ---KLAAVKGLAANTVTS----NALLHGLCERGNMEEVFEVLKQMLE-KGLLLDRISYNT 541
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++ G ++ K E + ++ MV+++ P + +++++ L+DMGK + A +
Sbjct: 542 LIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTY--NFLMKGLADMGKIDDVHRLLHEAKE 599
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
T +L+ K R+++A++ + + + + Y + C+ E
Sbjct: 600 YGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTE 659
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + RG +P S + C G+ E +E+ + ++GLL + FC ++L+
Sbjct: 660 AFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIG 719
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+C Q+D ++ +++ + TY +++DG K G M+EA + + M
Sbjct: 720 GHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM 772
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKE---HQPEEVCGLLRDVVERGYIPCAMELSR 295
A I+ + S+RG+ ++ L K H+ EV D+ +G P +
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF----DLACQGVAPDVFTFTT 260
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C G+ + +L + G+ + +++++ + + ++A+ ++ + K
Sbjct: 261 AINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSK 320
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
+ V TY VL+ GL K EEA + M + + F ++ C ++ +A+
Sbjct: 321 VNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEAL 380
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ DEM G KP+ T+ ++ GF
Sbjct: 381 RVRDEMAMKGMKPNFVTFNTLLQGF 405
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 190/441 (43%), Gaps = 42/441 (9%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G +P V + L+D RQ A + M GV PNK T+ + + LC+ G+
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
++ + G + M YNLVI+ + ++ + AF LNEM G ++P TYS
Sbjct: 399 MGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKG-GISPNVYTYS 457
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-----LSGN------------------- 188
I++G + ++E + ++ M+ L P F +SG
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE 517
Query: 189 ---------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ +I LS++GK A + ++ + D T G ++ S G +++A
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA 577
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
Q+ H + G+ D Y + K E+V L+ ++E+G +P + +
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G + +LS + GL+ DS SL+ +C ++KA+ L ++ K
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNH 417
++ Y+ L+DG K + A IF+ + K L + ++ ++ C ++R A+ +
Sbjct: 698 ISCYNALIDGFCKSDDISHARNIFNSIICKGLP-PNCVTYTTLIDGYCKAGDIRDAIDLY 756
Query: 418 DEMLKMGHKPDEATYKQVISG 438
+EML G PD Y + +G
Sbjct: 757 NEMLTEGVAPDAFVYSVLAAG 777
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 186/432 (43%), Gaps = 11/432 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L +++D Y G DG EV +M+ G P++ CN LL L R + + L + G M
Sbjct: 176 LDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFME 235
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
G+SP+ +T+S + + C+ E VV + ++G + V YN +I + G
Sbjct: 236 GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIE 295
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF EM L P TY +I++G + + + + ++ M L+P +
Sbjct: 296 EAFGYKKEM-EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST- 353
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A I K ++ T +++ L K GR+ A +I +++
Sbjct: 354 -LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + ++H EE LL ++ + G P S + C G+ +
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERA 472
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LL ++ GL ++F + L+ YC A K+ + + D+ Y+ L+ G
Sbjct: 473 SGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIG 532
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMKNHDEMLKMGHKP 427
L G+M+EA+ +D M E K + F ++ L KA + +ML G P
Sbjct: 533 LSNVGKMDEAIEYYDEMLE-KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNP 591
Query: 428 DEATYKQVISGF 439
++ Y Q++ G+
Sbjct: 592 NDFIYAQILEGY 603
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 181/446 (40%), Gaps = 43/446 (9%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ + M G++ N +++ RQ+ A L M + G+SPN +T+S++ LC
Sbjct: 405 ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLC 464
Query: 94 RSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G+ E GLL+ I ++ +Y +I Y ++G F A + L +M NLTP
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTR-ENLTPDL 523
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
Y+S++ G K + + M+EK P F G +I S G AE +
Sbjct: 524 YCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG--LIHGYSMAGNLEKAEQLL 581
Query: 209 KRACDEKIELQD-------------DTC----------------------GCMLKALSKE 233
+ + + D D G ++ LS
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G ++ A+ + +I + G+ Y + ++ CK E+ GLL ++ ++G P
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C + ++++ KGL + ++L++ YC I AI L+ ++
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKA 413
+ D Y VL G G +++A+ I + M SSF +V C +L++
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQET 821
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+K M+ P T + ++ G
Sbjct: 822 VKFLHVMMDKDIVPSLLTVENIVIGL 847
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 138/353 (39%), Gaps = 32/353 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G ++ M G P +L+ ++ + + S +M+ G+ P+
Sbjct: 568 YSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPD 627
Query: 82 KFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+ +V L SG + + +L + + S++Y +I + K D A L+
Sbjct: 628 NRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLD 687
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + + PG S Y++++DG + + + I ++ K L P +I
Sbjct: 688 EMAK-KGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTT--LIDGYC 744
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A ++ E + + S G +++A+ I + RG + S
Sbjct: 745 KAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS 804
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE-------- 308
+ V+ CK + +E L ++++ +P + + V GK E
Sbjct: 805 -FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVEL 863
Query: 309 ------------VEELLSAVLDKGLL-LDSFCCSSLMEYYCSNRQIDKAIALH 348
+ L + ++++GL+ LD ++++ +C +DKA+ LH
Sbjct: 864 QQKNASHRDTDHLSSLFTDMINQGLVPLDVI--HNMIQSHCKQGYLDKALMLH 914
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 1/219 (0%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C +LK L + + ++ + GI+ Y + CK E ++ ++
Sbjct: 211 CNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR 270
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E G + + + C G +E + D GL+ D F +++ C + D
Sbjct: 271 ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPD 330
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
+A L ++ +V Y L+DG + G +EA +I M V + ++ ++
Sbjct: 331 QAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLI 390
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC L + +A + +M K+G+ D TY VI G +
Sbjct: 391 RGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHL 429
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 196/448 (43%), Gaps = 27/448 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + GF P V + LL L ++ I A L+ M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
+ PN T++ + LCR G+ + LLD + + + Y ++D K GD
Sbjct: 175 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230
Query: 129 GAAFDRLNEMCNGRNLTPGFSTY-----SSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+A + L +M ++ P + + +++G + + +++ M+E+K +
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPD 290
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++ N +I GK + AE ++ I T M+ K+ R+ A ++
Sbjct: 291 VVTYN-ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+L++ +G + + + C+ + ++ LL ++ E G + + + + C
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL----- 358
G ++LL ++ G+ + C++L++ C N ++ A+ + ++K K +
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469
Query: 359 ------DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
DV TY++L+ GL +G+ EA +++ M +V + ++ V+ LC L
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A + D M P+ T+ +I+G+
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGY 557
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/453 (18%), Positives = 180/453 (39%), Gaps = 60/453 (13%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L++ L R+ + A L M+ DG+ PN+ T+ + +C+ G L L
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 236
Query: 105 LD-----SGIYSSVMY------NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
L S I +V+ +I+ + G + A L EM + ++P TY++
Sbjct: 237 LRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNA 296
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++ + K ++ + M+ + ++P + +I + AAE +F
Sbjct: 297 LINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSS--MIDGFCKQNRLDAAEHMFYLMAT 354
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ T ++ + RV + I++ H ++E G+ Y ++ C+
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK-------------------------- 307
LL+++V G P + + + C GK K
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474
Query: 308 --------------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
E EEL + +G++ D+ +S++ C ++D+A +
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCH 406
+ S +V T+ L++G K GR+++ + +F M +V+++ +++ ++
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK 594
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + A+ EM+ G PD T + +++G
Sbjct: 595 VGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 178/466 (38%), Gaps = 103/466 (22%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL--------LDSGIYSSVM------ 114
L+G MVR P+ + + ++ R G+ +VV+ L + YS +
Sbjct: 65 LFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFC 124
Query: 115 --------------------YNLVIDFYS------KKGDFGAAFDRLNEMCNGRNLTPGF 148
+ V+ F + + A D ++MC P
Sbjct: 125 SCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-----PNV 179
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
T++++++G R + + ++ M+E L P G ++ + MG T +A +
Sbjct: 180 VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT--IVDGMCKMGDTVSALNLL 237
Query: 209 KRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYA 260
++ +E ++ + CM+ GR EA Q+ + ER D Y A
Sbjct: 238 RKM-EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNA 296
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N KE + E L +++ RG IP + S + C + + E + + KG
Sbjct: 297 LINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 356
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIAL----------------------HIKIEKLKGSL 358
D ++L+ YC +++D I L ++ L +
Sbjct: 357 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 416
Query: 359 D-------------VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS--------- 396
D V T + LLDGL +G++++A+ +F M++ K+ +S
Sbjct: 417 DLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPD 476
Query: 397 ---FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ I++S L + + +A + ++EM G PD TY VI G
Sbjct: 477 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 137/348 (39%), Gaps = 56/348 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + +G F + E+Y M G +P+ ++++D +QN + A ++ M G
Sbjct: 297 LINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 356
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG-IYSSVMYNLVIDFYSKKGDFGAAF 132
SP+ T++ + CR+ + + + LL ++G + +++ Y +I + + GD AA
Sbjct: 357 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 416
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---------------ARRYEKTEVSDR-------- 169
D L EM + + P T +++LDG A + K ++
Sbjct: 417 DLLQEMVSS-GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEP 475
Query: 170 --------IVGLMVEKKLL---------PKHFLSGN----DYVIQKLSDMGKTYAAEMIF 208
I GL+ E K L P + + + VI L + A +F
Sbjct: 476 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMF 535
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ T ++ K GRV + ++++ + RGI Y ++ K
Sbjct: 536 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKV 595
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ ++++ G P + + + G W + EEL AV
Sbjct: 596 GNINGALDIFQEMMASGVYPDTITIRNMLT-----GLWSK-EELKRAV 637
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + ++++ ++G F++ E+Y M G VP N+++ L +Q+ +
Sbjct: 471 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDE 530
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVID 120
A+ ++ +M SPN T++ + C++G+ + L L GI + ++ Y +I
Sbjct: 531 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIH 590
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ K G+ A D EM + P T ++L G
Sbjct: 591 GFRKVGNINGALDIFQEMM-ASGVYPDTITIRNMLTG 626
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 193/464 (41%), Gaps = 45/464 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D G E Y M+ G +V + N++L+ + + A ++ +
Sbjct: 184 SVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE 243
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGA 130
G++ N FT++ + LC+ GK L D GI +V+ YN +I + +K + A
Sbjct: 244 SGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM + TP T++ ++DG + E + I M + +LP G
Sbjct: 303 ACKVYKEMLD-NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG--I 359
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ L G+++ +F + + ++ KEG + A +Y + E G
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
IT Y + ++ CK + + LL D+ +G + C + K
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
ELL+ + GL + F +S++ + + +++AI L+ K+ D+ TY L+DGL
Sbjct: 480 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 539
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC------------------------ 405
K GR+ A I M ++ + ++++ LC
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 599
Query: 406 ---------HLKE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
H KE L++A + HDEML G PD TY +++G
Sbjct: 600 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 43/317 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L +++ G +G +++ GFVP N ++D ++ I LAS +Y M
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 415
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDF 128
G++P+ T++ + C+ ++ L LL+ G+ + Y +ID + K+ D
Sbjct: 416 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 475
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + LNE+ G L+P Y+S++ G +
Sbjct: 476 KSAHELLNEL-RGAGLSPNRFIYNSMITGFK----------------------------- 505
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+M A ++K+ +E I T ++ L K GR+ A I+ +
Sbjct: 506 --------NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 557
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI D + +N LC + Q E +L D+ + IP + + +A +G +E
Sbjct: 558 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 617
Query: 309 VEELLSAVLDKGLLLDS 325
L +LD+GL+ D+
Sbjct: 618 AFRLHDEMLDRGLVPDN 634
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 153/382 (40%), Gaps = 75/382 (19%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+VY+ M GF P L+D +++ +I A ++ M + P T ++ + L
Sbjct: 305 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 364
Query: 93 CRSGK-FE---VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++G+ FE + + G + M YN +ID + K+G+ A + EMC +TP
Sbjct: 365 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE-VGITPS 423
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKL---------------------------- 179
TY+S++DG + +++ +++ M K L
Sbjct: 424 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 483
Query: 180 -LPKHFLSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
L LS N ++ I +M A ++K+ +E I T ++ L K G
Sbjct: 484 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 543
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ A I+ + +GI D + +N LC + Q E +L D+ + IP + +
Sbjct: 544 RLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 603
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+A +G +E L +LD+GL+ D+
Sbjct: 604 TLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNI---------------------------- 635
Query: 355 KGSLDVATYDVLLDGLFK-DGR 375
TYD+L++G FK DG
Sbjct: 636 -------TYDILVNGKFKGDGN 650
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 173/404 (42%), Gaps = 18/404 (4%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVL 102
++ +L+ Q +R A L + G+ PNK T+S++ C++G FE
Sbjct: 145 LAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYS 204
Query: 103 GLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS---TYSSILDGA 158
+ GI SSV N +++ Y K + AF N+ L G + T++++L
Sbjct: 205 EMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA-----LESGLANVFTFNTLLSWL 259
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ K + + ++ K + P + +S N+ ++ AA ++K D
Sbjct: 260 CKEGKMNEACNLWDEVIAKGISP-NVVSYNNIILGHCRK-DNINAACKVYKEMLDNGFTP 317
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ K+G ++ A I+H + + I D+ + LCK + E L
Sbjct: 318 NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLF 377
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
V +G++P M + + +G + + + G+ + +SL++ +C
Sbjct: 378 NKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKG 437
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV 398
ID A+ L +++ +D+ Y L+DG K M+ A + + ++ +S + F+
Sbjct: 438 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG-LSPNRFI 496
Query: 399 I--VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+++ ++ + +A+ + +M+ G D TY +I G +
Sbjct: 497 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ML+A KEG + EA Q + RG+ + Y FV++LC + LLR++
Sbjct: 42 TLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM 101
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G+IP + + + +G E L +++ G ++ +SLM+ YC +
Sbjct: 102 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 161
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------ 395
A+ L +I + + TY VL+DG K+G +E+A + MK + SS
Sbjct: 162 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 221
Query: 396 -----------------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+F ++S LC ++ +A DE++ G
Sbjct: 222 LEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGIS 281
Query: 427 PDEATYKQVISG 438
P+ +Y +I G
Sbjct: 282 PNVVSYNNIILG 293
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 169/418 (40%), Gaps = 40/418 (9%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----E 99
P++ N LL A+ R+N A L+ M+ GV+ + FT ++ + + G +
Sbjct: 2 TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61
Query: 100 VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L G+ Y++ + K + G A L EM P T++S++
Sbjct: 62 HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM-RAAGWIPPEGTFTSVITAC 120
Query: 159 RR----YEKTEVSDRIV------GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
+ E + D +V L V L+ + + GN +A ++
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN------------LRSALVLV 168
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL--- 265
+ + T ++ K G +++A + Y + +GI S Y+ ++L
Sbjct: 169 NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR---SSVYSLNSILEGY 225
Query: 266 --CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C+ Q + D +E G + + ++ C +GK E L V+ KG+
Sbjct: 226 LKCQSWQ--NAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ ++++ +C I+ A ++ ++ + + T+ +L+DG FK G +E A IF
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
MK+ ++ + ++ I++ LC + ++ + G P Y +I GF+
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 400
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 198/431 (45%), Gaps = 16/431 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G D +++ MR G P + N +++ L + ++ A + M G
Sbjct: 86 IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRL 135
P+ T++ + LC+ + + L + V Y VI+ K GD +A L
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRML 205
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVS----DRIVGLMVEKKLLPKHFLSGNDYV 191
++M N R TP TYSS++DG + + E + D ++ L ++ + L G
Sbjct: 206 DQMTN-RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG---A 261
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ +L +GK + +R + + C + L K RVK+A ++ + ERG
Sbjct: 262 LHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC---IDGLCKAERVKKAKAVFDRMVERGC 318
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
T S Y V LCK+ + ++ L+ E+ I + + + C G++ E
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACA 378
Query: 312 LLSAVLDKGLL-LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L S VLD+ + D F + +++ +C RQIDKA+ +H ++ + + +V T+++L+ GL
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-RNCCNVVTWNILVHGL 437
Query: 371 FKDGRMEEA-VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
D R+ +A + + E + ++ +V +C + A++ +E +K G PD
Sbjct: 438 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 497
Query: 430 ATYKQVISGFM 440
TY +I+G +
Sbjct: 498 VTYSALITGLV 508
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 12/348 (3%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGD 127
M+ P+ FT++++ + LCRS + E LL + +YN +I YSK D
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
FG AF L EM L P TY++I+DG + +T+ + +++ M +K P +
Sbjct: 61 FGQAFKFLAEMVKNHCL-PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTY- 118
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +++ L + K A+ + + T +K L K RV EA + ++
Sbjct: 119 -NVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARK---FLA 174
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+T Y +N LCK + +L + RG P + S + C G+ +
Sbjct: 175 RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVE 234
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
LL ++L G + +SL+ I KA + +++E+ + DV +Y+ +
Sbjct: 235 RAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAM 414
DGL K R+++A +FD M E ++SS+ ++V LC KEL A+
Sbjct: 295 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 162/360 (45%), Gaps = 16/360 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E + + P V + +++ L + ++ AS + M G +P+ T+S +
Sbjct: 168 EARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227
Query: 93 CRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G+ E +GLLDS + + V YN ++ + G G A D L EM R TP
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM-ERRGFTPD 286
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+Y++ +DG + E+ + + + MVE+ P S ++++L + A +
Sbjct: 287 VVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA--SSYSMLVEELCKKKELDDAITL 344
Query: 208 FKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY-AFVNVL 265
++A EK ++ D +L L K GR EA ++ + + I D +Y ++
Sbjct: 345 VEQA-REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 403
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK Q ++ + + ++ER + + V C + + E +L ++D+G + D
Sbjct: 404 CKRRQIDKALQIHKQMLERNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 462
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIF 383
+L++ C + A AL + E +KG DV TY L+ GL + EEA +F
Sbjct: 463 VTYGTLVDAMCKCGK--SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 520
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L+ L + ++++A Q+ + E G D+ Y A ++ K + L ++
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V+ +P + + V C G+ K+ +LL + DKG + + + ++E C R++
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
D+A + ++ DV TY+ + GL K R++EA + M V S+ V+
Sbjct: 132 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDV--VSYTTVI 189
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC +L A + D+M G PD TY +I GF
Sbjct: 190 NGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 173/423 (40%), Gaps = 54/423 (12%)
Query: 28 FMDGLEVYRMMRVY------GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
F G EV R M + G P + A N+LL AL+R I A + M R G +P+
Sbjct: 227 FCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD 286
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+++ LC++ + KK A FDR+ E
Sbjct: 287 VVSYNACIDGLCKAERV-------------------------KKAK--AVFDRMVE---- 315
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI--QKLSDMG 199
R TP S+YS +++ +K E+ D I +VE+ + Y + L G
Sbjct: 316 RGCTPNASSYSMLVE--ELCKKKELDDAIT--LVEQAREKYQIVDILLYTVLLDGLCKGG 371
Query: 200 KTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ A +F + DEKI D ML + K ++ +A+QI+ + ER +
Sbjct: 372 RFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN-CCNVVTW 430
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
V+ LC + + + +L +V+ G+IP + V + C GK EL +
Sbjct: 431 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
G + D S+L+ ++A L K LDVA ++ ++ G ++G +
Sbjct: 491 GGCVPDVVTYSALITGLVHENMAEEAYLLFTK-------LDVALWNAMILGYAENGSGDL 543
Query: 379 AVRIFDYMKELKV-VSSSSFVIVVS-RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++F + E V ++ +F +S +L + L KA D +K G PD +I
Sbjct: 544 GLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLI 603
Query: 437 SGF 439
F
Sbjct: 604 DVF 606
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++++ P A + + C + ++ +LL + + G + D ++L+ Y +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFV 398
+A ++ K V TY ++DGL K GR ++AV++ D M++ K S + ++
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRD-KGCSPNIYTYN 119
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++V LC ++L +A K +EM G+ PD TY I G
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 160
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 43/423 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS S LS ++ Y++ + D ++V+ MRV+GF P + AC LL++L + +
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG----IYSSVM-YNLVIDFYS 123
+Y MVR GV PN ++++ C+SG E LL+ I+ + YN +I Y
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243
Query: 124 KKGDFGAAF---DRL------------NEMCNG-----------------RNLTPGFSTY 151
KKG A DR+ N + G TP TY
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTY 303
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++DG R E + R+ +M + L P + + +++KL + GK A +
Sbjct: 304 TTLIDGYCRVNDLEEALRLREVMEVEGLHPG--VVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ K+E + TC ++ A K G + A+++ + E G+ + A ++ CK H+
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ L ++++ G+ P S V S + + V L + KGL +D +L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 332 MEYYCSNRQIDKA--IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ C +I+ A I ++ + +KG D Y L FK G+ A + D M +
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKG--DSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539
Query: 390 KVV 392
+++
Sbjct: 540 RLM 542
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ A K G V++A Q+ + + R I Y +++ CK+ E G+ +D +ERG
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI-QDRMERG 261
Query: 286 YI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
+ P + + + C +G+ +E L + G + ++L++ YC +++A
Sbjct: 262 GVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEA 319
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
+ L +E V TY+ +L L ++G++++A R+ + M E KV + + +++
Sbjct: 320 LRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINA 379
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + ++ AMK +ML+ G KPD+ T+K +I GF
Sbjct: 380 YCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 122/281 (43%), Gaps = 22/281 (7%)
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR-----------ACDEKIELQDDT- 222
VE L KH L + +I L+ + A+ + +R + + + DD
Sbjct: 65 VESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPD 124
Query: 223 -----CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
++ + ++AIQ++ + G +N L K V +
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 184
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +V G +P + + + C G ++ E+LL+ + + + D F ++L+ YC
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-- 395
+A+ + ++E+ S D+ TY+ L+ G ++GRM EA+R+F +E+ + +
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF---REINGATPNHV 301
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ ++ C + +L +A++ + M G P TY ++
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSIL 342
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 186/414 (44%), Gaps = 10/414 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V+ ++ G P+ + CN LL +L R NE + C +V GVSP+ + ++
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ-KCCEAFDVVCKGVSPDVYLFTTAIN 257
Query: 91 ILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ GK E + L ++G+ +V+ +N VID G + AF +M R +
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGME 316
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS ++ G R ++ + ++ M +K P + N +I + G A
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN--LIDSFIEAGSLNKAI 374
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I + + L T ++K K G+ A ++ + G V + + + +L
Sbjct: 375 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 434
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C + + +++ R P L+ ++ C GK + EL L+KG ++D+
Sbjct: 435 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 494
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ C ++D+A + +I +D +Y+ L+ G +++EA D
Sbjct: 495 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 554
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M + + + ++ I++ L ++ ++ +A++ D+ + G PD TY +I G
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 608
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 99/514 (19%), Positives = 197/514 (38%), Gaps = 85/514 (16%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + ++ + G + ++++ M G P V N ++D L
Sbjct: 242 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 301
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVI 119
A MV G+ P T+S++ + L R+ + + V+ + G +V+ YN +I
Sbjct: 302 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 361
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL---------DGARRYEKTEVSD-- 168
D + + G A + + ++ + L+ STY++++ D A R K +S
Sbjct: 362 DSFIEAGSLNKAIE-IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 420
Query: 169 ------------------------RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
R VG M+ + + P L +I L GK A
Sbjct: 421 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT--LISGLCKHGKHSKA 478
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ + ++ + T +L L + G++ EA +I I RG + Y ++
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 538
Query: 265 LCKEHQPEE-----------------------VCGLLR------------DVVERGYIPC 289
C + + +E +CGL D G +P
Sbjct: 539 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 598
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
S + C + +E +E ++ K + ++ + L+ YC + ++ A+ L
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLC 405
++ S + ATY L+ G+ R+EEA +F+ M+ E V ++ + +L
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ EM P++ TY +I G+
Sbjct: 719 QMVKVECLLR---EMHSKNVHPNKITYTVMIGGY 749
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 147/375 (39%), Gaps = 19/375 (5%)
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG-IYSSVMYNLVIDFYSKK 125
G M+ +SP + + LC+ GK E+ L+ G + + N ++ +
Sbjct: 448 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 507
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G AF R+ + GR +Y++++ G +K + + + MV++ L P ++
Sbjct: 508 GKLDEAF-RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 566
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYH 244
+I L +M K A + F C L D T M+ K R +E + +
Sbjct: 567 Y--SILICGLFNMNKVEEA-IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 623
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + + Y + C+ + L D+ +G P + + +
Sbjct: 624 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 683
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E + L + +GL + F ++L++ Y Q+ K L ++ + TY
Sbjct: 684 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 743
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
V++ G +DG + EA R+ + M+E +V S KE +L+
Sbjct: 744 VMIGGYARDGNVTEASRLLNEMREKGIVPDS---------ITYKEFIYGYLKQGGVLEAF 794
Query: 425 HKPDEATYKQVISGF 439
DE Y +I G+
Sbjct: 795 KGSDEENYAAIIEGW 809
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 203/444 (45%), Gaps = 14/444 (3%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I C+ S +++ Y++ F G E ++ YG+ + +C L+ AL ++N
Sbjct: 143 ISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKEN 202
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-DSGIY----SSVMYN 116
+Y M+R + PN FT+++V LC++GK ++ D +Y + V YN
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 117 LVIDFYSKKGDFGAAFDR---LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
+ID Y K G G + L EM +++P +T++ ++DG + + S ++
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVE-NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+++ + P + +S N +I L + GK A + + ++ T ++ K
Sbjct: 322 MLDQDVKP-NVISYNS-LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
+KEA+ ++ + +G Y ++ CK + ++ L ++ G +P
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ +A C G + ++L + KG L D LME YC + KA L ++ K
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV-VSSSSFVIVVSRLCHLKELR 411
+ TY++++ G K+G ++ A + M KE ++ ++ +S+ +++ +L
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 412 KAMKNHDEMLKMGHKPDEATYKQV 435
A +EML+ G P+ TY+ V
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIV 582
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 43/423 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS S LS ++ Y++ + D ++V+ MRV+GF P + AC LL++L + +
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG----IYSSVM-YNLVIDFYS 123
+Y MVR GV PN ++++ C+SG E LL+ I+ + YN +I Y
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243
Query: 124 KKGDFGAAF---DRL------------NEMCNG-----------------RNLTPGFSTY 151
KKG A DR+ N + G TP TY
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTY 303
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++DG R E + R+ +M + L P + + +++KL + GK A +
Sbjct: 304 TTLIDGYCRVNDLEEALRLREVMEVEGLHPG--VVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ K+E + TC ++ A K G + A+++ + E G+ + A ++ CK H+
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ L ++++ G+ P S V S + + V L + KGL +D +L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 332 MEYYCSNRQIDKA--IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ C +I+ A I ++ + +KG D Y L FK G+ A + D M +
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKG--DSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539
Query: 390 KVV 392
+++
Sbjct: 540 RLM 542
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ A K G V++A Q+ + + R I Y +++ CK+ E G+ +D +ERG
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI-QDRMERG 261
Query: 286 YI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
+ P + + + C +G+ +E L + G + ++L++ YC +++A
Sbjct: 262 GVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEA 319
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
+ L +E V TY+ +L L ++G++++A R+ + M E KV + + +++
Sbjct: 320 LRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINA 379
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + ++ AMK +ML+ G KPD+ T+K +I GF
Sbjct: 380 YCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++AIQ++ + G +N L K V + + +V G +P +
Sbjct: 143 TQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNV 202
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C G ++ E+LL+ + + + D F ++L+ YC +A+ + ++E+
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKA 413
S D+ TY+ L+ G ++GRM EA+R+F +E+ + + ++ ++ C + +L +A
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLF---REINGATPNHVTYTTLIDGYCRVNDLEEA 319
Query: 414 MKNHDEMLKMGHKPDEATYKQVI 436
++ + M G P TY ++
Sbjct: 320 LRLREVMEVEGLHPGVVTYNSIL 342
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 189/440 (42%), Gaps = 46/440 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----K 97
G+ CN LL AL R + A +Y + SPN FT++++ LCR+G
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMFTFTILIHGLCRAGDIGTA 896
Query: 98 FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+E++ + G+ +V ++N+VI +A + EM + P TYS+I+D
Sbjct: 897 YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR----AC 212
+ K + + R+V MV K P + ++ L GK A + +R C
Sbjct: 957 SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSS--LLHGLCKAGKLDEATALLQRMTRSGC 1014
Query: 213 DEKI------------------------ELQDDTC-------GCMLKALSKEGRVKEAIQ 241
I E+ D C +L A K G+ ++AI
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ ++ E+G Y + +++ CK+ + E C LL ++++G +P + + +A C
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K E LL +L + D +++++ C ++D A L I++ + ++
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDE 419
TY+ L+ GL K R ++A + M + S ++ V+ LC K + +A K +
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254
Query: 420 MLKMGHKPDEATYKQVISGF 439
ML G PD+ TY VIS
Sbjct: 1255 MLSDGLAPDDVTYSIVISSL 1274
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 16/434 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D G D + M G P V ++LL L + ++ A+ L M R
Sbjct: 952 STIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 1011
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGA 130
G SPN T++ + C+ G+ + LL D G +V+ Y +++D + K G
Sbjct: 1012 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L E+ + P TY+S+LD + ++ E + +++ M++K +P + +
Sbjct: 1072 AIG-LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN--VVSYNT 1128
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI L K + ++ ++ T ++ A+ K RV A ++++LI E G
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWKEV 309
T Y + V+ LCK + ++ LLR++ + G P + + + C +
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA---IALHIKIEKLKGSLDVATYDVL 366
+L +L GL D S ++ C R +D+A + L +K G++ TY L
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI---TYGTL 1305
Query: 367 LDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+DG K G +++A+ I + + +F I + L LR+A + + ML+ G
Sbjct: 1306 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365
Query: 426 KPDEATYKQVISGF 439
PD TY ++ GF
Sbjct: 1366 VPDTVTYNTLLKGF 1379
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 170/397 (42%), Gaps = 13/397 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N +++ L + + + A L MV +G +PN F+++ V C++ + E L LL+ +
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V Y VI+ K A +++M R P TY +++DG R +
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ-RGCQPNVITYGTLVDGFCRVGDLD 352
Query: 166 VSDRIVGLMVEKKLLPKHFLSGND-YVIQKLSDMGKTYAA-EMIFKRACDEKIELQDDTC 223
+ +V M E+ P N +V + +DM + + +M+ + C + T
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD-AINYST- 410
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ K G+++EA + + RG + ++ LCK + LLR +
Sbjct: 411 --IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIG 468
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
P + S + + C + E E L ++ D +S+++ C +R+I+
Sbjct: 469 MDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIND 528
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVS 402
A L ++ DV TY +++ KD ++ A ++ + MKE K V ++ +++
Sbjct: 529 AFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALIN 588
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC + KA EML G P+ TY +I G
Sbjct: 589 GLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 180/445 (40%), Gaps = 57/445 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
G+ + CN LL+ L + ++ A L+ + + + T+S + R+GK
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 99 --------------------EVVLGLLDSGIYS----------------SVMYNLVIDFY 122
++ GL D+G S SV YN +I+
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGL 240
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
SK A L EM + P +Y+++L G + + E + ++ MV + P
Sbjct: 241 SKSDRLDDAIRLLEEMVDN-GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 183 HFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ VI L + + A + + +R C + T G ++ + G +
Sbjct: 300 --VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI----TYGTLVDGFCRVGDLDG 353
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+++ ++ERG Y ++V C+ + E +L+ +++ G P A+ S ++
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK +E +LL ++ +G D C S+L++ C ID A L + +
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELK----VVSSSSFVIVVSRLCHLKELRKAM 414
DV Y +L+ L K R+ EA D M + + VV+ +S VV LC + + A
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNS---VVDGLCKSRRINDAF 530
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
D M G PD TY VI F
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSF 555
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 167/363 (46%), Gaps = 13/363 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++LD + G D + + +M G+VP + N+LLD +++E+ A L +M++
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G PN +++ V LC++ K + LL+ + ++ V +N +ID K
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A++ N + TP TY+S++ G +RR+++ E ++ M K+ ++
Sbjct: 1177 AYELFN-LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY---LLREMTRKQGCSPDIITY 1232
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
N VI L + A +F + + + D T ++ +L K + EA + L+
Sbjct: 1233 NT-VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 1291
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ G Y ++ CK ++ +L+ ++ +G P + S F+ +G+ +
Sbjct: 1292 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 1351
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ ELL +L GL+ D+ ++L++ +C + A+ L + + D ATY L+
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Query: 368 DGL 370
L
Sbjct: 1412 GHL 1414
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + + M GF P V + N +L + N + A L MV G P+ +++ V
Sbjct: 248 DAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVI 307
Query: 90 QILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ + + ++D I + + Y ++D + + GD A + + +M R
Sbjct: 308 NGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE-RGY 366
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY++I+ R E + +++ +M++ P +I GK A
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI--NYSTIISGFCKAGKLREA 424
Query: 205 ----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
E + +R C + ++ AL K + A ++ + Y
Sbjct: 425 HDLLEQMIRRGCRPDVA----CLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK + E L +V+ P + + V C + + L + G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
++ D S ++ +C + +D A + ++++ K DV TY L++GL K G +++A
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAF 600
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F M + ++ ++ LC + ++ +A + + M K PD TY +I+G
Sbjct: 601 DVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGL 660
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 171/416 (41%), Gaps = 9/416 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L + M G P V + +++ L + +++ A + M++ G PN T+ +
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342
Query: 90 QILCR----SGKFEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CR G E+V + + G +++ YN ++ + ++ D A L M
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ-TGC 401
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P YS+I+ G + K + ++ M+ + P ++ +I L +A
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD--VACLSTLIDALCKAAAIDSA 459
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + + + ++ AL K R+ EA ++ + Y + V+
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + + L + G +P + S + S C ++L + + + D
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S+L+ C +DKA + ++ + ++ TY+ L+DGL K ++E+A + +
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M++ S ++ +++ LC+ L +A + EM G PD TY ++
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/395 (19%), Positives = 156/395 (39%), Gaps = 49/395 (12%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
MIQ R Q + ++ ++D + G +E+ R M G+ P N ++
Sbjct: 326 MIQ----RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFC 381
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL- 117
R+N++ A + M++ G P+ +S + C++GK LL+ I ++
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVA 441
Query: 118 ----VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
+ID K +A + L M G + P YS ++ + ++ ++ + +
Sbjct: 442 CLSTLIDALCKAAAIDSAQELL-RMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDV 500
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV+ + P D V TY + ++ L K
Sbjct: 501 MVKNRCYP-------DVV---------TYNS---------------------VVDGLCKS 523
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
R+ +A ++ + G+ Y ++ CK++ + +L + E +P +
Sbjct: 524 RRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTY 583
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + C G + ++ +L G + ++L++ C ++++A + + K
Sbjct: 584 SALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRK 643
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ D TY L++GL R+EEA R+ MK+
Sbjct: 644 QSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 166/415 (40%), Gaps = 32/415 (7%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G+ + M VP + N ++DA+ + + +A L+ + G +PN T++ +
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 1200
Query: 90 QILCRSGKFEVVLGLL-----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
LC+S +F+ LL G ++ YN VID K A+ +M +
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD-G 1259
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L P TYS ++ ++ + ++ ++ LM++ P G +I G
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT--LIDGFCKTGNLDK 1317
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A I + + T + LSK GR+++A ++ + G+ Y +
Sbjct: 1318 ALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 1377
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE-VEELLSAVLDKGLL 322
C E+ L + + G P + V K +K+ + E+ +++D G
Sbjct: 1378 GFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFK 1437
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
L N ++ + I++E DV ++D K G ++A ++
Sbjct: 1438 L--------------NHELSSKLEASIEVEA-----DVRLGCAIVDMFGKCGSPQDARKV 1478
Query: 383 FDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
F+ M + VV S+ + V + H +E +A M G +PD T+ +++
Sbjct: 1479 FEGMDQRNVVLWSAMLGVY--VFHKQE-EQAFGLWRVMGLEGVEPDAVTFLSLLT 1530
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 10/318 (3%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
MIQ+ G + S ++ + G + ++ M G P V+ + L+DAL +
Sbjct: 396 MIQT--GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKA 453
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMY 115
I A L + +P+ +S++ LC++ + LD + + V Y
Sbjct: 454 AAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTY 513
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N V+D K AF + M + P TYS ++ + + + +++ M
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRM-RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E K +P + +I L G A +F+ T ++ L K +
Sbjct: 573 EAKCVPD--VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINK 630
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V++A ++ ++ ++ T Y +N LC + EE +LR++ ++G +P M
Sbjct: 631 VEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGT 690
Query: 296 FVASQCGKGKWKEVEELL 313
+ + + VE+LL
Sbjct: 691 LLRALQKTNNLELVEQLL 708
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 183/404 (45%), Gaps = 9/404 (2%)
Query: 39 RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF 98
++ G+ P L+ L + +I A + +V G ++ + + LC+ G+
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178
Query: 99 EVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
L LL D + VMY+ +ID K AFD +EM + + ++P TYS+
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVS-KGISPNVVTYSA 237
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++ G + + + + M+ + + P + + ++ GK + +F
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTF--NILVDGFCKDGKMKEGKTVFAMMMK 295
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ I+ T ++ V +A I + +S+RG+ Y ++ CK + +E
Sbjct: 296 QGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDE 355
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L +++ + IP + + + C GK +L+ + D+G+ D SS+++
Sbjct: 356 AMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD 415
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVV 392
C N Q+DKAIAL K++ ++ TY +L+DGL K GR+E+A IF D + + +
Sbjct: 416 ALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNI 475
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +++ +++ C+ +A+ +M PD TY+ +I
Sbjct: 476 TVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 152/343 (44%), Gaps = 8/343 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++D + + + A LY MV G+SPN T+S + G+ + + L
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I ++ +N+++D + K G + M + + P TY S++DG
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEG-KTVFAMMMKQGIKPNVVTYCSLMDGYC 313
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + I+ M ++ + P + + +I + K A +FK + I
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPD--IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPD 371
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K G++ A+++ + +RG+ Y + ++ LCK HQ ++ LL
Sbjct: 372 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 431
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ ++G P + + C G+ ++ + +L KG + + ++ +C+
Sbjct: 432 KLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D+A+AL K++ D TY++++ LF ++A ++
Sbjct: 492 LFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 160/369 (43%), Gaps = 9/369 (2%)
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAA 131
G PN T++ + + LC G+ L D+ + V Y +I K G+ AA
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
D L + +G + P YS+I+DG + + + + MV K + P + +
Sbjct: 182 LDLLRRV-DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN--VVTYSAL 238
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I +G+ A +F + E I+ T ++ K+G++KE ++ ++ ++GI
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + ++ C + + +L + +RG P + + C K E
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + K ++ D +SL++ C +I A+ L ++ D+ TY +LD L
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K+ ++++A+ + +K+ + + ++ I++ LC L A +++L G+
Sbjct: 419 KNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN 478
Query: 431 TYKQVISGF 439
TY +I GF
Sbjct: 479 TYTVMIHGF 487
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 140/320 (43%), Gaps = 8/320 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++Y M G P V +AL+ + +++ A L+ M+ + + P+ +T++++
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILV 274
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ GK + V ++ GI +V+ Y ++D Y + A L M R +
Sbjct: 275 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ-RGV 333
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P +Y+ ++DG + +K + + + M K ++P + + +I L +GK A
Sbjct: 334 NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPD--VVTYNSLIDGLCKLGKISYA 391
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ D + T +L AL K +V +AI + + ++GI Y ++
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + E+ + D++ +GY + + C KG + E LLS + D + D
Sbjct: 452 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511
Query: 325 SFCCSSLMEYYCSNRQIDKA 344
+ ++ + DKA
Sbjct: 512 AVTYEIIIRSLFDKDENDKA 531
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 44/314 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + G +G V+ MM G P V +L+D E+ A + M
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM 328
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDF 128
+ GV+P+ +++++ C+ K + + L I V YN +ID K G
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A ++EM + R + P TYSSILD + + D+ + L+ + K
Sbjct: 389 SYALKLVDEM-HDRGVPPDIITYSSILDALCKNHQV---DKAIALLTKLK---------- 434
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D+ I T ++ L K GR+++A I+ +
Sbjct: 435 ------------------------DQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 470
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G + + Y ++ C + +E LL + + IP A+ + S K + +
Sbjct: 471 KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDK 530
Query: 309 VEELLSAVLDKGLL 322
E+ L ++ +GLL
Sbjct: 531 AEK-LREMITRGLL 543
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + + ++++D + + + +++ M +P V N+L+D L + +I
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLV 118
A L M GV P+ T+S + LC++ + + + LL D GI ++ Y ++
Sbjct: 389 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTIL 448
Query: 119 IDFYSKKGDFGAAFDRLNE-MCNGRNLTPGFSTYSSILDG 157
ID K G A + + + G N+T +TY+ ++ G
Sbjct: 449 IDGLCKGGRLEDAHNIFEDLLVKGYNIT--VNTYTVMIHG 486
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 197/441 (44%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + S +++ +G + LE+ M G P + NAL++ L ++ A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
L MV G PN+ T+ V +++C+SG+ + + LL + I +V Y+++ID
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G AF+ NEM + Y++++ G + + +++ M+++K+ P
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I GK AE + K I T ++ KE ++ +A
Sbjct: 316 D--VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ L+ +G + +N CK + ++ L R + RG + + + + C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK + +EL ++ + + D L++ C N + +KA+ + KIEK K LD+
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDE 419
Y++++ G+ ++++A +F + LK V ++ I++ LC L +A +
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M + GH P+ TY +I +
Sbjct: 553 MEEDGHSPNGCTYNILIRAHL 573
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 182/410 (44%), Gaps = 36/410 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L++ + M + G + + +++ R ++ LA G +++ G P+ T+S +
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
LC G+ L L+ DR+ EM + P T
Sbjct: 152 LCLEGRVSEALELV---------------------------DRMVEMGH----KPTLITL 180
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++++G K + ++ MVE P G V++ + G+T A + ++
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP--VLKVMCKSGQTALAMELLRKM 238
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ KI+L ++ L K+G + A +++ + +G Y + C +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LLRD+++R P + S + +GK +E EEL ++ +G+ D+ +SL
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 332 MEYYCSNRQIDKAI-ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
++ +C Q+DKA L + + K G ++ T+++L++G K +++ + +F M
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV+ + ++ ++ C L +L A + EM+ +PD +YK ++ G
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 168/381 (44%), Gaps = 17/381 (4%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDFYS 123
L+ M R P +S + ++ R+ ++++VL L + +NL +I+
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKL 179
+ AF + ++ P T+S++++G R E E+ DR+V + + L
Sbjct: 119 RCRKLSLAFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ + L + L GK A ++ R + + + T G +LK + K G+ A
Sbjct: 178 ITLNAL------VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++ + ER I + Y ++ LCK+ + L ++ +G+ + + +
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+W + +LL ++ + + D S+L++ + ++ +A LH ++ + S D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
TY L+DG K+ ++++A + D M + +F I+++ C + ++
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M G D TY +I GF
Sbjct: 412 KMSLRGVVADTVTYNTLIQGF 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 156/362 (43%), Gaps = 42/362 (11%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
CY+ G + DG ++ R M P V A +AL+D ++ ++R A L+ M++ G+SP
Sbjct: 293 CYA--GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ T++ + C+ + LD N ++D KG C
Sbjct: 351 DTVTYTSLIDGFCKENQ-------LDKA-------NHMLDLMVSKG------------CG 384
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---DYVIQKLSD 197
P T++ +++G Y K + D GL + +K+ + ++ + +IQ +
Sbjct: 385 -----PNIRTFNILING---YCKANLIDD--GLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+GK A+ +F+ ++ + +L L G ++A++I+ I + + +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ +C + ++ L + +G P + + C KG E + L +
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ G + + L+ + K+ L +I++ S+D +T +++D + DGR++
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD-MLSDGRLK 613
Query: 378 EA 379
++
Sbjct: 614 KS 615
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 159/374 (42%), Gaps = 24/374 (6%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS 112
++D L + + A L+ M G + ++ + + C +G+++ LL I
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 113 VMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ ++V ID + K+G A + EM R ++P TY+S++DG + + + +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 168 DRIVGLMVEKKLLP--KHF-LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ ++ LMV K P + F + N Y L D G +M + + + T
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV-----TYN 426
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
+++ + G+++ A +++ + R + Y ++ LC +PE+ + + +
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 285 GYIPCAMEL-----SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
MEL + + C K + +L ++ KG+ D + ++ C
Sbjct: 487 -----KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+ +A L K+E+ S + TY++L+ +G ++ ++ + +K +S V
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 400 VVSRLCHLKELRKA 413
+V + L+K+
Sbjct: 602 MVVDMLSDGRLKKS 615
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 197/441 (44%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + S +++ +G + LE+ M G P + NAL++ L ++ A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
L MV G PN+ T+ V +++C+SG+ + + LL + I +V Y+++ID
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G AF+ NEM + Y++++ G + + +++ M+++K+ P
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I GK AE + K I T ++ KE ++ +A
Sbjct: 316 D--VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ L+ +G + +N CK + ++ L R + RG + + + + C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK + +EL ++ + + D L++ C N + +KA+ + KIEK K LD+
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDE 419
Y++++ G+ ++++A +F + LK V ++ I++ LC L +A +
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M + GH P+ TY +I +
Sbjct: 553 MEEDGHSPNGCTYNILIRAHL 573
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 182/410 (44%), Gaps = 36/410 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L++ + M + G + + +++ R ++ LA G +++ G P+ T+S +
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
LC G+ L L+ DR+ EM + P T
Sbjct: 152 LCLEGRVSEALELV---------------------------DRMVEMGH----KPTLITL 180
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++++G K + ++ MVE P G V++ + G+T A + ++
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP--VLKVMCKSGQTALAMELLRKM 238
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ KI+L ++ L K+G + A +++ + +G Y + C +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LLRD+++R P + S + +GK +E EEL ++ +G+ D+ +SL
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 332 MEYYCSNRQIDKAI-ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
++ +C Q+DKA L + + K G ++ T+++L++G K +++ + +F M
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV+ + ++ ++ C L +L A + EM+ +PD +YK ++ G
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 168/381 (44%), Gaps = 17/381 (4%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDFYS 123
L+ M R P +S + ++ R+ ++++VL L + +NL +I+
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKL 179
+ AF + ++ P T+S++++G R E E+ DR+V + + L
Sbjct: 119 RCRKLSLAFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ + L + L GK A ++ R + + + T G +LK + K G+ A
Sbjct: 178 ITLNAL------VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++ + ER I + Y ++ LCK+ + L ++ +G+ + + +
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+W + +LL ++ + + D S+L++ + ++ +A LH ++ + S D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
TY L+DG K+ ++++A + D M + +F I+++ C + ++
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M G D TY +I GF
Sbjct: 412 KMSLRGVVADTVTYNTLIQGF 432
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 166/423 (39%), Gaps = 51/423 (12%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
CY+ G + DG ++ R M P V A +AL+D ++ ++R A L+ M++ G+SP
Sbjct: 293 CYA--GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ T++ + C+ + LD N ++D KG G N + N
Sbjct: 351 DTVTYTSLIDGFCKENQ-------LDKA-------NHMLDLMVSKG-CGPNIRTFNILIN 395
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
G + + I DG + K + + + L IQ ++GK
Sbjct: 396 G------YCKANLIDDGLELFRKMSLRGVVADTVTYNTL------------IQGFCELGK 437
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A+ +F+ ++ + +L L G ++A++I+ I + + + Y
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ +C + ++ L + +G P + + C KG E + L + + G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + L+ + K+ L +I++ S+D +T L L RM +A
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTL---ARMLKAG 614
Query: 381 RIFDYMKELKVVSSSSFVIVVSRLCHLKE---LRKAMKNHDEMLKMGHKPDEATYKQVIS 437
D +F ++ C L+E + A M MG+KP+ TY VI
Sbjct: 615 HEPDVF---------TFTTLLRPFC-LEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIK 664
Query: 438 GFM 440
G +
Sbjct: 665 GLL 667
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 127/319 (39%), Gaps = 36/319 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ Y L DGLE++R M + G V N L+ ++ +A L+ M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDF 128
V V P+ ++ ++ LC +G+ E L + + S + +YN++I
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+D + + + P TY+ ++ G + +D + M E H +G
Sbjct: 509 DDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG----HSPNGC 563
Query: 189 DYVIQKLSDMGK---TYAAEMIFK-RACDEKIELQD-----DTCGCMLKA---------- 229
Y I + +G+ T +A++I + + C ++ T MLKA
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFT 623
Query: 230 -------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
L + V +A ++ + G Y + L + +V G+L +
Sbjct: 624 TLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMF 683
Query: 283 ERGYIPCAMELSRFVASQC 301
ERG P A+ S F++ C
Sbjct: 684 ERGCQPNAVTKSTFISGLC 702
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 189/407 (46%), Gaps = 21/407 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P V A NA++ + N I A+ + M G P+ T++++ LC K + L
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 104 ----LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LLD+ + + + Y ++I+ +G A L EM R L P TY++I+ G
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEML-ARGLLPDMYTYNAIIRGMC 253
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ E + ++ + K P +S N ++ Q D G+ AEM F R C
Sbjct: 254 KEGMVERAAELITSLTSKGCKP-DVISYNILLRAFLNQGKWDEGEKLVAEM-FSRGC--- 308
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
E T ++ +L + GR+ EAI + ++ E+ +T Y ++ LCKE + +
Sbjct: 309 -EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME-- 333
G++ ++ G +P + + +A+ C G + E+ + + G + ++++
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ C +R +A+ + + D TY+ L+ L +DG +EEA+ + D M++
Sbjct: 428 WSCGDRS--RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 485
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ IV+ LC ++ + A+ EM++ G +P+E TY +I G
Sbjct: 486 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 153/359 (42%), Gaps = 8/359 (2%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---- 99
+P V L++A + I A L M+ G+ P+ +T++ + + +C+ G E
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 263
Query: 100 VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
++ L G V+ YN+++ + +G + + EM + R P TYS ++
Sbjct: 264 LITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS-RGCEPNKVTYSILISSL 322
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
R+ + + + ++ +M+EK+L P + D +I L G+ A I
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTY--SYDPLISALCKEGRLDLAIGIMDYMISNGCLP 380
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+L AL K G +A++I++ + G S Y ++ L G++
Sbjct: 381 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 440
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ +G P + + ++ C G +E LL + G + ++ C
Sbjct: 441 PAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 500
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
R+ID AI + ++ + + TY +L++G+ G EA+ + + + V+S SF
Sbjct: 501 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSF 559
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L G LE++ +R G P VS+ N ++ AL+ + A + AM+ G
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V P++ T++ + LCR G E +GLLD SG +V+ YN+V+ K A
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRI 170
EM + P +TY +++G R E E+++ +
Sbjct: 508 GMFAEMIE-KGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
L + + C GK+ E L +++KG D C+ L++ + + + I+KA + ++I
Sbjct: 71 LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEIL 129
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELR 411
+ DV Y+ ++ G K R+E A ++ + MK + ++ I++ LC+ ++L
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVI 436
A+K D++L P TY +I
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILI 214
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 186/414 (44%), Gaps = 10/414 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V+ ++ G P+ + CN LL +L R NE + C +V GVSP+ + ++
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ-KCCEAFDVVCKGVSPDVYLFTTAIN 281
Query: 91 ILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ GK E + L ++G+ +V+ +N VID G + AF +M R +
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGME 340
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS ++ G R ++ + ++ M +K P + N +I + G A
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN--LIDSFIEAGSLNKAI 398
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I + + L T ++K K G+ A ++ + G V + + + +L
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C + + +++ R P L+ ++ C GK + EL L+KG ++D+
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ C ++D+A + +I +D +Y+ L+ G +++EA D
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M + + + ++ I++ L ++ ++ +A++ D+ + G PD TY +I G
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 99/514 (19%), Positives = 197/514 (38%), Gaps = 85/514 (16%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + ++ + G + ++++ M G P V N ++D L
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVI 119
A MV G+ P T+S++ + L R+ + + V+ + G +V+ YN +I
Sbjct: 326 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 385
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL---------DGARRYEKTEVSD-- 168
D + + G A + + ++ + L+ STY++++ D A R K +S
Sbjct: 386 DSFIEAGSLNKAIE-IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 444
Query: 169 ------------------------RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
R VG M+ + + P L +I L GK A
Sbjct: 445 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT--LISGLCKHGKHSKA 502
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ + ++ + T +L L + G++ EA +I I RG + Y ++
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 265 LCKEHQPEE-----------------------VCGLLR------------DVVERGYIPC 289
C + + +E +CGL D G +P
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
S + C + +E +E ++ K + ++ + L+ YC + ++ A+ L
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLC 405
++ S + ATY L+ G+ R+EEA +F+ M+ E V ++ + +L
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ EM P++ TY +I G+
Sbjct: 743 QMVKVECLLR---EMHSKNVHPNKITYTVMIGGY 773
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 147/375 (39%), Gaps = 19/375 (5%)
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG-IYSSVMYNLVIDFYSKK 125
G M+ +SP + + LC+ GK E+ L+ G + + N ++ +
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G AF R+ + GR +Y++++ G +K + + + MV++ L P ++
Sbjct: 532 GKLDEAF-RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYH 244
+I L +M K A + F C L D T M+ K R +E + +
Sbjct: 591 Y--SILICGLFNMNKVEEA-IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 647
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + + Y + C+ + L D+ +G P + + +
Sbjct: 648 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 707
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E + L + +GL + F ++L++ Y Q+ K L ++ + TY
Sbjct: 708 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
V++ G +DG + EA R+ + M+E +V S KE +L+
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMREKGIVPDS---------ITYKEFIYGYLKQGGVLEAF 818
Query: 425 HKPDEATYKQVISGF 439
DE Y +I G+
Sbjct: 819 KGSDEENYAAIIEGW 833
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 188/432 (43%), Gaps = 15/432 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H + + + M V + P N L+ L+ N+ A L M
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
V G P+ FT+ V LC+ G ++ L LL + G + V+Y +ID +
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM N + + P TY+S++ Y + + R++ M+E+K+ P +
Sbjct: 272 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN--VVTF 328
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I GK AE ++ I+ T ++ R+ EA ++ L+
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + EE L R++ +RG + + + + G
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C +++KA+ + ++K K D+ TY+++++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS--FVIVVSRLCH--LKELRKAMKNHDEMLKMG 424
G+ K G++E+ +F + LK V + + ++S C LKE A+ EM + G
Sbjct: 509 GMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADAL--FREMKEDG 565
Query: 425 HKPDEATYKQVI 436
P+ TY +I
Sbjct: 566 TLPNSGTYNTLI 577
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 185/460 (40%), Gaps = 64/460 (13%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++++ M +P++ N LL A+ + N+ L L M +S + ++++++
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT---- 145
CR + + L +L G + Y + D LN C+G+ ++
Sbjct: 123 NCFCRRSQLPLALAVL--GKMMKLGY---------EPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 146 -----------PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
P T+++++ G + K + ++ MV + P F G V+
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT--VVNG 229
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L G A + K+ KIE ++ AL V +A+ ++ + +GI
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + + LC + + LL D++ER P + S + + +GK E E+L
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ + + D F SSL+ +C + ++D+A + + +V TY+ L+ G K
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 375 RMEEAVRIFDYMKELKVVSSS------------------------------------SFV 398
R+EE + +F M + +V ++ ++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
I++ LC +L KA+ + + K +PD TY +I G
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 133/313 (42%), Gaps = 8/313 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ C + G + D + M P V +AL+DA ++ ++ A LY M++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAF 132
+ P+ FT+S + C + + + + I + V YN +I + K
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ EM R L TY++++ G + +++ +I MV + P + ++
Sbjct: 416 ELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD--IITYSILL 472
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L GK A ++F+ K+E T M++ + K G+V++ ++ +S +G+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C++ EE L R++ E G +P + + + ++ G EL
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 313 LSAVLDKGLLLDS 325
+ + G + D+
Sbjct: 593 IKEMRSCGFVGDA 605
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L R+ EA+ + + + ++ L ++ E L+ +
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V RG P V C +G LL + + D +++++ C+ + +
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+ A+ L +++ +V TY+ L+ L GR +A R+ M E K+ + +F +
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +L +A K +DEM+K PD TY +I+GF
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 7/253 (2%)
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
LS N + KL D + EM+ R +E +L A++K + I +
Sbjct: 51 LSRNVLLDLKLDDAVDLFG-EMVQSRPLPSIVEFNK-----LLSAIAKMNKFDLVISLGE 104
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ I+ Y +N C+ Q +L +++ GY P + LS + C
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E L+ + ++ ++L+ + + +A+AL ++ D+ TY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKM 423
+++GL K G ++ A+ + M++ K+ + + ++ LC+ K + A+ EM
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 424 GHKPDEATYKQVI 436
G +P+ TY +I
Sbjct: 285 GIRPNVVTYNSLI 297
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ L ++V+ +P +E ++ +++ K+ V L + + + D + + L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ +C Q+ A+A+ K+ KL D+ T LL+G R+ EAV + D M ++
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +F ++ L + +A+ D M+ G +PD TY V++G
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 193/464 (41%), Gaps = 45/464 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D G E Y M+ G +V + N++L+ + + A ++ +
Sbjct: 302 SVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE 361
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGA 130
G++ N FT++ + LC+ GK L D GI +V+ YN +I + +K + A
Sbjct: 362 SGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 420
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM + TP T++ ++DG + E + I M + +LP G
Sbjct: 421 ACKVYKEMLD-NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG--I 477
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ L G+++ +F + + ++ KEG + A +Y + E G
Sbjct: 478 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 537
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
IT Y + ++ CK + + LL D+ +G + C + K
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 597
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
ELL+ + GL + F +S++ + + +++AI L+ K+ D+ TY L+DGL
Sbjct: 598 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 657
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC------------------------ 405
K GR+ A I M ++ + ++++ LC
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 717
Query: 406 ---------HLKE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
H KE L++A + HDEML G PD TY +++G
Sbjct: 718 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 43/317 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L +++ G +G +++ GFVP N ++D ++ I LAS +Y M
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 533
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDF 128
G++P+ T++ + C+ ++ L LL+ G+ + Y +ID + K+ D
Sbjct: 534 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 593
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + LNE+ G L+P Y+S++ G +
Sbjct: 594 KSAHELLNEL-RGAGLSPNRFIYNSMITGFK----------------------------- 623
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+M A ++K+ +E I T ++ L K GR+ A I+ +
Sbjct: 624 --------NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 675
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI D + +N LC + Q E +L D+ + IP + + +A +G +E
Sbjct: 676 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 735
Query: 309 VEELLSAVLDKGLLLDS 325
L +LD+GL+ D+
Sbjct: 736 AFRLHDEMLDRGLVPDN 752
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 153/382 (40%), Gaps = 75/382 (19%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+VY+ M GF P L+D +++ +I A ++ M + P T ++ + L
Sbjct: 423 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 482
Query: 93 CRSGK-FE---VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++G+ FE + + G + M YN +ID + K+G+ A + EMC +TP
Sbjct: 483 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE-VGITPS 541
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKL---------------------------- 179
TY+S++DG + +++ +++ M K L
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601
Query: 180 -LPKHFLSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
L LS N ++ I +M A ++K+ +E I T ++ L K G
Sbjct: 602 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 661
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ A I+ + +GI D + +N LC + Q E +L D+ + IP + +
Sbjct: 662 RLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 721
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+A +G +E L +LD+GL+ D+
Sbjct: 722 TLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNI---------------------------- 753
Query: 355 KGSLDVATYDVLLDGLFK-DGR 375
TYD+L++G FK DG
Sbjct: 754 -------TYDILVNGKFKGDGN 768
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 173/404 (42%), Gaps = 18/404 (4%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVL 102
++ +L+ Q +R A L + G+ PNK T+S++ C++G FE
Sbjct: 263 LAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYS 322
Query: 103 GLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS---TYSSILDGA 158
+ GI SSV N +++ Y K + AF N+ L G + T++++L
Sbjct: 323 EMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA-----LESGLANVFTFNTLLSWL 377
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ K + + ++ K + P + +S N+ ++ AA ++K D
Sbjct: 378 CKEGKMNEACNLWDEVIAKGISP-NVVSYNNIILGHCRK-DNINAACKVYKEMLDNGFTP 435
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ K+G ++ A I+H + + I D+ + LCK + E L
Sbjct: 436 NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLF 495
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
V +G++P M + + +G + + + G+ + +SL++ +C
Sbjct: 496 NKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKG 555
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV 398
ID A+ L +++ +D+ Y L+DG K M+ A + + ++ +S + F+
Sbjct: 556 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG-LSPNRFI 614
Query: 399 I--VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+++ ++ + +A+ + +M+ G D TY +I G +
Sbjct: 615 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 35/242 (14%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+EG + EA Q + RG+ + Y FV++LC + LLR++ G+IP
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + + +G E L +++ G ++ +SLM+ YC + A+ L +I
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS---------------- 395
+ + TY VL+DG K+G +E+A + MK + SS
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349
Query: 396 -------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+F ++S LC ++ +A DE++ G P+ +Y +I
Sbjct: 350 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409
Query: 437 SG 438
G
Sbjct: 410 LG 411
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 188/432 (43%), Gaps = 15/432 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +L+ Y H + + + M V + P N L+ L+ N+ A L M
Sbjct: 136 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 195
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
V G P+ FT+ V LC+ G ++ L LL + G + V+Y +ID +
Sbjct: 196 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 255
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM N + + P TY+S++ Y + + R++ M+E+K+ P +
Sbjct: 256 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN--VVTF 312
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I GK AE ++ I+ T ++ R+ EA ++ L+
Sbjct: 313 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 372
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + CK + EE L R++ +RG + + + + G
Sbjct: 373 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 432
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ ++ G+ D S L++ C +++KA+ + ++K K D+ TY+++++
Sbjct: 433 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 492
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS--FVIVVSRLCH--LKELRKAMKNHDEMLKMG 424
G+ K G++E+ +F + LK V + + ++S C LKE A+ EM + G
Sbjct: 493 GMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADAL--FREMKEDG 549
Query: 425 HKPDEATYKQVI 436
P+ TY +I
Sbjct: 550 TLPNSGTYNTLI 561
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 185/460 (40%), Gaps = 64/460 (13%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++++ M +P++ N LL A+ + N+ L L M +S + ++++++
Sbjct: 47 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 106
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT---- 145
CR + + L +L G + Y + D LN C+G+ ++
Sbjct: 107 NCFCRRSQLPLALAVL--GKMMKLGY---------EPDIVTLSSLLNGYCHGKRISEAVA 155
Query: 146 -----------PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
P T+++++ G + K + ++ MV + P F G V+
Sbjct: 156 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT--VVNG 213
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L G A + K+ KIE ++ AL V +A+ ++ + +GI
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + + LC + + LL D++ER P + S + + +GK E E+L
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ + + D F SSL+ +C + ++D+A + + +V TY+ L+ G K
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393
Query: 375 RMEEAVRIFDYMKELKVVSSS------------------------------------SFV 398
R+EE + +F M + +V ++ ++
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
I++ LC +L KA+ + + K +PD TY +I G
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 493
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 136/321 (42%), Gaps = 8/321 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ C + G + D + M P V +AL+DA ++ ++ A LY M++
Sbjct: 280 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAF 132
+ P+ FT+S + C + + + + I + V YN +I + K
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ EM R L TY++++ G + +++ +I MV + P + ++
Sbjct: 400 ELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD--IITYSILL 456
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L GK A ++F+ K+E T M++ + K G+V++ ++ +S +G+
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C++ EE L R++ E G +P + + + ++ G EL
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576
Query: 313 LSAVLDKGLLLDSFCCSSLME 333
+ + G + D+ S ++
Sbjct: 577 IKEMRSCGFVGDASTISMVIN 597
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L R+ EA+ + + + ++ L ++ E L+ +
Sbjct: 136 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 195
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V RG P V C +G LL + + D +++++ C+ + +
Sbjct: 196 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 255
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+ A+ L +++ +V TY+ L+ L GR +A R+ M E K+ + +F +
Sbjct: 256 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 315
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +L +A K +DEM+K PD TY +I+GF
Sbjct: 316 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 354
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 7/253 (2%)
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
LS N + KL D + EM+ R +E +L A++K + I +
Sbjct: 35 LSRNVLLDLKLDDAVDLFG-EMVQSRPLPSIVEFNK-----LLSAIAKMNKFDLVISLGE 88
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ I+ Y +N C+ Q +L +++ GY P + LS + C
Sbjct: 89 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 148
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E L+ + ++ ++L+ + + +A+AL ++ D+ TY
Sbjct: 149 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 208
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKM 423
+++GL K G ++ A+ + M++ K+ + + ++ LC+ K + A+ EM
Sbjct: 209 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 268
Query: 424 GHKPDEATYKQVI 436
G +P+ TY +I
Sbjct: 269 GIRPNVVTYNSLI 281
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ L ++V+ +P +E ++ +++ K+ V L + + + D + + L
Sbjct: 46 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ +C Q+ A+A+ K+ KL D+ T LL+G R+ EAV + D M ++
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +F ++ L + +A+ D M+ G +PD TY V++G
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 207/479 (43%), Gaps = 48/479 (10%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGL---FMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+ S GR + A L++ YS + F ++V+ ++ G P++ CN LL +L
Sbjct: 161 LTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLV 220
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM 114
+ NE C ++ +G P+ F+++ V LC+ GK E + L GI +V+
Sbjct: 221 KANEFE-KCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVV 279
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I+ + G AF+ L E + + P TY ++++G + + + ++
Sbjct: 280 TYNCIINGLCQNGRLDNAFE-LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDE 338
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+ P + N +I MG A I + I T +++ K
Sbjct: 339 MIGSGFNPNVVVFNN--LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKS 396
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ-----------------PEE--- 273
+++ A I G+++ + Y+ V+ LCK+ + P +
Sbjct: 397 DQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 456
Query: 274 ---VCGLLRD------------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
VCGL +D ++E+G + + + CG GK E ++ +L+
Sbjct: 457 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE 516
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+GL +D ++L+ +C+ +++ L ++ K D+ TY+ LL GL G++++
Sbjct: 517 RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDD 576
Query: 379 AVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A++++D K ++S+ ++ I++ C + +E+L + + Y +I
Sbjct: 577 AIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 635
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 189/474 (39%), Gaps = 79/474 (16%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
GF P V N L+D + I A + M+ ++P T + Q C+S + E
Sbjct: 343 GFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA 402
Query: 100 --VVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+ +L SG I+ Y+ V+ + KK + +AF R +M RN P + ++
Sbjct: 403 ENALEEILSSGLSIHPDNCYS-VVHWLCKKFRYHSAF-RFTKMMLSRNFRPSDLLLTMLV 460
Query: 156 DG----ARRYEKTEV-------------------------------SDRIVGLMVEKKLL 180
G + E TE+ + RIV M+E+ L
Sbjct: 461 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL- 519
Query: 181 PKHFLSGNDYVI---------------QKLSDMG---KTYAAEMIFKRAC-----DEKIE 217
P ++ N ++ ++++ G Y + + C D+ I+
Sbjct: 520 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 579
Query: 218 LQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
L D+ T G M++ K R+++ +++ + + + + Y + C
Sbjct: 580 LWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHC 639
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ LL ++ +G +P S + C G ++ + L+ + +G + +
Sbjct: 640 QNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVV 699
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
C ++L+ YC Q+D A + +++ + TY V++DG K G ME+A + M
Sbjct: 700 CYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM 759
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KE +V ++ ++ + C ++ A K D+M G DE TY ++ G+
Sbjct: 760 KESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 164/387 (42%), Gaps = 15/387 (3%)
Query: 12 SDALSLVLD-CYS------HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
S LS+ D CYS K + +MM F P+ L+ L + +
Sbjct: 411 SSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL 470
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVI 119
A+ L+ ++ G +K T + + LC +GK +V +L+ G+ + YN +I
Sbjct: 471 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 530
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ +G F RL E R + P TY+ +L G K + + ++ L
Sbjct: 531 LGFCNEGKVEGCF-RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 589
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ G +++ + E +F +K+EL ++KA + G V A
Sbjct: 590 ISNIHTYG--IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+Q+ + +GI + Y + ++ +C E+ L+ ++ + G++P + + +
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ E ++ + + F + +++ YC ++KA L IK+++ D
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYM 386
V TY+VL +G K M+ A ++ D M
Sbjct: 768 VVTYNVLTNGFCKANDMDNAFKVCDQM 794
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 8/205 (3%)
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ +++L++ +G ++ L K ++ E+ C + R V+ G P + +
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFR-VMSEGACPDVFSFTNVIN 251
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C GK + EL + G+ + + ++ C N ++D A L K+
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAM 414
++ TY L++GL K ++ + D E+ + V+V + L C + + A+
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLD---EMIGSGFNPNVVVFNNLIDGYCKMGNIEGAL 368
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
K D M+ P T ++ GF
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGF 393
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
DV ++ +++ L K G+ME A+ +F M++L + + ++ +++ LC L A +
Sbjct: 242 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 301
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
++M G +P+ TY +I+G +
Sbjct: 302 EKMTVKGVQPNLKTYGALINGLI 324
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 186/414 (44%), Gaps = 10/414 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V+ ++ G P+ + CN LL +L R NE + C +V GVSP+ + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ-KCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 91 ILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ GK E + L ++G+ +V+ +N VID G + AF +M R +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGME 327
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS ++ G R ++ + ++ M +K P + N +I + G A
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN--LIDSFIEAGSLNKAI 385
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I + + L T ++K K G+ A ++ + G V + + + +L
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C + + +++ R P L+ ++ C GK + EL L+KG ++D+
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ C ++D+A + +I +D +Y+ L+ G +++EA D
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M + + + ++ I++ L ++ ++ +A++ D+ + G PD TY +I G
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/514 (19%), Positives = 197/514 (38%), Gaps = 85/514 (16%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + ++ + G + ++++ M G P V N ++D L
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVI 119
A MV G+ P T+S++ + L R+ + + V+ + G +V+ YN +I
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL---------DGARRYEKTEVSD-- 168
D + + G A + + ++ + L+ STY++++ D A R K +S
Sbjct: 373 DSFIEAGSLNKAIE-IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 169 ------------------------RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
R VG M+ + + P L +I L GK A
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT--LISGLCKHGKHSKA 489
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ + ++ + T +L L + G++ EA +I I RG + Y ++
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 265 LCKEHQPEE-----------------------VCGLLR------------DVVERGYIPC 289
C + + +E +CGL D G +P
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
S + C + +E +E ++ K + ++ + L+ YC + ++ A+ L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLC 405
++ S + ATY L+ G+ R+EEA +F+ M+ E V ++ + +L
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ EM P++ TY +I G+
Sbjct: 730 QMVKVECLLR---EMHSKNVHPNKITYTVMIGGY 760
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 147/375 (39%), Gaps = 19/375 (5%)
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG-IYSSVMYNLVIDFYSKK 125
G M+ +SP + + LC+ GK E+ L+ G + + N ++ +
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G AF R+ + GR +Y++++ G +K + + + MV++ L P ++
Sbjct: 519 GKLDEAF-RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYH 244
+I L +M K A + F C L D T M+ K R +E + +
Sbjct: 578 Y--SILICGLFNMNKVEEA-IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + + Y + C+ + L D+ +G P + + +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E + L + +GL + F ++L++ Y Q+ K L ++ + TY
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
V++ G +DG + EA R+ + M+E +V S KE +L+
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDS---------ITYKEFIYGYLKQGGVLEAF 805
Query: 425 HKPDEATYKQVISGF 439
DE Y +I G+
Sbjct: 806 KGSDEENYAAIIEGW 820
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 187/408 (45%), Gaps = 14/408 (3%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV-RDGVSPNKFTWSLVAQILCR 94
++ R +G P+ + N +L L R + A LY MV RD V P FT+ + A+ LCR
Sbjct: 128 QLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCR 187
Query: 95 SGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G+ + L LL + +V+Y VI +G A LNEM +
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL-MGCAADVN 246
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
T+ ++ G + + R+V M+ K +P G +++Q L + + A +
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYG--FLLQGLCRVRQADEARAMLG 304
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R + + L + G L EG++ EA ++Y + +G Y ++ LCK
Sbjct: 305 RVPELNVVLFNTVIGGCLA----EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ LLR++ ++G+ P + + + S C G W + LL + KGL L+S +
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++ C + ++D+A+ L ++ + D+ +Y+ ++ L + +MEEA +F+ + E
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
VV++ ++ ++ L + A++ EM+ G D +Y +I
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 13/231 (5%)
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+++ T G +AL + GR EA+ + ++ G Y ++ LC + E
Sbjct: 169 DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 274 VCGLLRDVVERGYIPCAMELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
LL +++ G CA +++ F V CG G+ +E L+ ++ KG +
Sbjct: 229 AATLLNEMLLMG---CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 285
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L++ C RQ D+A A+ ++ +L +V ++ ++ G +G++ EA +++ M LK
Sbjct: 286 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMG-LK 340
Query: 391 --VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I++ LC L + A++ EM K G P+ TY V+ F
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 391
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 8/328 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + E+Y M + G P + L+ L + I A L M + G +PN T
Sbjct: 324 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVT 383
Query: 85 WSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++V C++G ++ LL+ G+ +S YN +I K G A + EM
Sbjct: 384 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM- 442
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P +Y++I+ E+ E ++ + ++E+ ++ + +I L G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY--NTIIHALLRDG 500
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A + K L + ++KA+ K+G V ++ + ++E+GI + Y
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYN 560
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ LCKE + + L + ++ +G P + + + C G LL + ++
Sbjct: 561 ILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+ D + L+ ++C R +D A L
Sbjct: 621 NVHPDIITYNILISWHCKVRLLDDAAML 648
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 192/460 (41%), Gaps = 52/460 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + E + MR + P +CNALL L + L+ + M G+ + FT+
Sbjct: 199 GMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTY 258
Query: 86 SLVAQILCRSGKFEVV----------------------------LGLLDSGI-------- 109
+++ LC+ G E+ LGLLD I
Sbjct: 259 NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 318
Query: 110 ----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
+ YN +I+ + K AF+ L+EM L P TYS+ +D + K
Sbjct: 319 ADCDPDVITYNALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDA---FCKEG 374
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRACDEKIELQDD 221
+ + V+ + + L+ N++ L D G A + + I+L
Sbjct: 375 MLQEAIKFFVDMRRVA---LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 431
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L L +EGR+KEA +++ + G+ Y A V+ K + E +L+++
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
E+ P + + C + + +E + L+ + + G+ ++ ++LM+ Y + Q
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIV 400
+A+ L ++ L TY L+DGL K G ++EA+ F M E+ + + + + +
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
V LC A K DEML G PD+ Y +I G M
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 651
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 185/413 (44%), Gaps = 9/413 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ E M+ G P V + +DA ++ ++ A + M R
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
++PN+FT++ + C++G L L L +GI + V Y ++D ++G A
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 450
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ M N + P TY++++ G + ++ E + I+ M EK + P L G ++
Sbjct: 451 EVFRAMLNA-GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT--IL 507
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L + + A+++ + I ++ A K G+ EA+ + + + G+
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLI 567
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y A ++ LCK +E + E G P + V C ++ ++L
Sbjct: 568 ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKL 627
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+LDKG++ D ++L++ + + +A+ L ++ ++ LD+ Y L+ GL
Sbjct: 628 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 687
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
G++++A + D M V+ ++ ++ + L ++ +A++ +EM K G
Sbjct: 688 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 175/428 (40%), Gaps = 9/428 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + GL + + ++ M+ P V NAL++ + + A M +G
Sbjct: 296 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355
Query: 78 VSPNKFTWSLVAQILCRSGKF-EVVLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAF 132
+ PN T+S C+ G E + +D + + Y +ID K G+ A
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ E+ + TY+++LDG + + ++ + M+ + P ++
Sbjct: 416 KLVEEILQA-GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ--ETYTALV 472
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ A+ I K ++ I+ G +L L E R++EA + I E GI
Sbjct: 473 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 532
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ K Q E LL ++++ G I + + C G +E
Sbjct: 533 TNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHH 592
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ + GL + ++L++ C N + A L ++ D Y L+DG K
Sbjct: 593 FGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 652
Query: 373 DGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G ++EA+ + D M E+ + + ++ ++ L H +++KA DEM+ G PDE
Sbjct: 653 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 712
Query: 432 YKQVISGF 439
Y +I +
Sbjct: 713 YMCLIKKY 720
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D + L ++G A F + ++ + +C +L LSK GR + + + +
Sbjct: 189 DALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA 248
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI Y ++ LCKE E L + E G+ P + + + G E
Sbjct: 249 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE 308
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA-LH-IKIEKLKGSLDVATYDVL 366
+ + D D ++L+ +C ++ KA LH +K LK +V TY
Sbjct: 309 CICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP--NVVTYSTF 366
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+D K+G ++EA++ F M+ + + + ++ ++ C L +A+K +E+L+ G
Sbjct: 367 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 426
Query: 426 KPDEATYKQVISGF 439
K + TY ++ G
Sbjct: 427 KLNVVTYTALLDGL 440
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 118/315 (37%), Gaps = 72/315 (22%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +LD +G + EV+R M G P AL+ + E+ A + M
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE---VVLG-LLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
+ P+ + + LC + E +++G + +SGI + +V+Y ++D Y K G
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553
Query: 131 AFDRLNEMCN------------------------------GR----NLTPGFSTYSSILD 156
A L EM + GR L P + Y++++D
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSGN----------------------- 188
G + EV+ ++ M++K ++P + GN
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673
Query: 189 -----DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I LS G+ A + + + + C++K G+V EA+++
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733
Query: 244 HLISERGITVRDSDY 258
+ +++RG+ SD+
Sbjct: 734 NEMAKRGMITGLSDH 748
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G ++ + + ++D Y G + L + M G + AL+D L + ++ A
Sbjct: 530 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEA 589
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
+G M G+ PN ++ + LC++ FEV L D + +M Y +ID
Sbjct: 590 MHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 649
Query: 122 YSKKGDFGAAF---DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
K G+ A DR+ E+ + Y++++ G + + + ++ M+ K
Sbjct: 650 NMKHGNLQEALNLRDRMIEI----GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 705
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+LP + +I+K +GK DE +ELQ++
Sbjct: 706 VLPDEVVYM--CLIKKYYALGKV-----------DEALELQNE 735
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 197/444 (44%), Gaps = 32/444 (7%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A+S+V+ YS GL LE+Y +++ Y + P V ACN+LL+ L + I +A
Sbjct: 130 EAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTC 189
Query: 72 AMVR--------------------DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---- 107
MV+ G PN ++ + C+ G E+ GL
Sbjct: 190 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 249
Query: 108 GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
G +V Y +I+ + KKGDF A DRL N R LT Y++I+D ++
Sbjct: 250 GFLPTVETYGAIINGFCKKGDF-KAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 308
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ + M+E P ++ N + D GK A+ + ++A + + + +
Sbjct: 309 AVETIEGMIECGCKPD-IVTYNTLISGSCRD-GKVSEADQLLEQALGKGLMPNKFSYTPL 366
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ A K+G A ++ERG Y A V+ L + + + ++ERG
Sbjct: 367 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 426
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P A + ++ C K K + LL+ +LD+ +L D+F ++L++ + N +D+A
Sbjct: 427 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 486
Query: 347 L-HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L + IEK + Y+ ++ G K G M++A+ + MK+ + ++ V+
Sbjct: 487 LFELTIEKGMNP-GIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 545
Query: 405 CHLKELRKAMKNHDEMLKMGHKPD 428
+L A K EM+KM KP+
Sbjct: 546 VKQHDLDGAQKMFREMVKMKCKPN 569
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 114/285 (40%), Gaps = 18/285 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G + +E M G P + N L+ R ++ A L + G
Sbjct: 296 IIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 355
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGD 127
+ PNKF+++ + C+ G ++ L D Y ++++ LV+ G+
Sbjct: 356 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVV-----AGE 410
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A +M R + P Y+ ++ G + K + ++ M+++ +LP F+
Sbjct: 411 VDVALTIREKMLE-RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 469
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
++ G A +F+ ++ + M+K K G +K+A+ + +
Sbjct: 470 T--LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 527
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+R + + Y ++ K+H + + R++V+ P M+
Sbjct: 528 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVMD 572
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 181/424 (42%), Gaps = 46/424 (10%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S G D ++V + M VP + ++ +L + + A L M+ G++ N
Sbjct: 160 SKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 219
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLN 136
T+S + LC+ + + + LL + V Y+ VID K G A D
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + P TY+S++ G R + + R++G MV+ P ++
Sbjct: 280 EM----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT--LMSAFC 333
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
MG+ A +F++ K+ T ++ L EGR+++A+++ I+ RG
Sbjct: 334 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 393
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y V+ CK +Q + L+ D RG++P + + VA C G+ + + L +
Sbjct: 394 TYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 453
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+G C +S VA Y ++LD L +DGR
Sbjct: 454 NSEG----GPCPTS-----------------------------VAMYAIILDALCRDGRT 480
Query: 377 EEAVRIFDYMKELK-VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
++AV+ ++ M + V ++++F VV LC + ++A + +EM+K GH P T V
Sbjct: 481 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 540
Query: 436 ISGF 439
+S +
Sbjct: 541 VSAY 544
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 175/417 (41%), Gaps = 33/417 (7%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
+R G P N +L L + A L+ M G + N T+ + LC++
Sbjct: 37 IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARL 95
Query: 98 FEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ +GLL G+ ++++N+VI + G A +M + P F TY+
Sbjct: 96 LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPDFLTYT 153
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS-----DMGKTYAAEMI 207
++ G + + + +++ MV + +P + + V+Q L D + EM+
Sbjct: 154 KLVHGLSKAGRLRDAVQVLQEMVSARHVPDN--TTLTVVVQSLCLGDRVDDARELVEEML 211
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNVLC 266
+ I T ++ L K R+ EA+ + ++ RG T Y ++ LC
Sbjct: 212 HRGMAANAI-----TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266
Query: 267 KEHQPEEVCGLLRDVV----ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
K G LRD V E P A+ + + C G E LL ++D
Sbjct: 267 KA-------GRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCA 319
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D ++LM +C ++D A L ++ K S DV T+ L+DGL +GRME+A+ +
Sbjct: 320 PDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 379
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + + ++ VV C ++RKA + + G P+ TY +++G
Sbjct: 380 LEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAG 436
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 129/310 (41%), Gaps = 21/310 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D G D ++++ M P N+L+ R ++ A L G MV
Sbjct: 259 STVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
D +P+ T++ + C+ G+ + L + + V + ++D +G
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L E+ R P TY+ ++DG + + ++ +V + +P +
Sbjct: 376 ALELLEEITR-RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY--NI 432
Query: 191 VIQKLSDMGKTYAAEMIFKR------ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
++ G+T A + C + + +L AL ++GR +A+Q Y
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY----AIILDALCRDGRTDDAVQFYE 488
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +RG + + V LCK HQP++ LL ++++ G+ P V++ C G
Sbjct: 489 EMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 548
Query: 305 KWKEVEELLS 314
++ +EL S
Sbjct: 549 MIQKADELAS 558
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 192/430 (44%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++C + L + M G+ P++ N+LL+ N I A L MV
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G P+ T++ + L + K + L++ + V Y VI+ K+G+
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + LN+M G+ + YS+++D +Y + + + M K + P F +
Sbjct: 224 ALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS-- 280
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L + G+ A + + KI T ++ A +KEG++ EA +++ + +R
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + +N C + +E + +V + +P + + + C K +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL+ ++ ++L+ + D A + ++ ++ TY+ LLDGL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G++E+A+ +F+Y+++ K+ ++ I+ +C ++ + G KPD
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 430 ATYKQVISGF 439
Y +ISGF
Sbjct: 521 IAYNTMISGF 530
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 178/440 (40%), Gaps = 44/440 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+ +L+ + H + + + M G+ P L+ L++ N+ A L M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---GIYSS--VMYNLVIDFYSKKGDF 128
V G P+ T+ V LC+ G+ ++ L LL+ G + V+Y+ VID K
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + EM N + + P TYSS++ Y + + R++ M+E+K+ P + ++ N
Sbjct: 257 DDALNLFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP-NVVTFN 314
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I + GK AE +F I+ T ++ R+ EA QI+ L+
Sbjct: 315 S-LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y +N CK + + L RD+ RG + + + +
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK--------------- 353
+ + ++ G+ + ++L++ C N +++KA+ + ++K
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 354 -------------------LKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
LKG DV Y+ ++ G K G EEA +F MKE +
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 394 SSSFVIVVSRLCHLKELRKA 413
S + R HL++ KA
Sbjct: 554 DSGTYNTLIR-AHLRDGDKA 572
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 171/401 (42%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + + L M GVS N +T++++ LCR + L +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 105 LDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + S V N +++ + A +++M P T+++++ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLF 181
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ K + +V MV K P G VI L G+ A + + KIE
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGA--VINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ +L K V +A+ ++ + +GI Y + ++ LC + + LL
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D++ER P + + + + +GK E E+L ++ + + + +SL+ +C +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++D+A + + DV TY+ L++G K ++ + + +F M +V ++ ++
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + A +M+ G P+ TY ++ G
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 162/377 (42%), Gaps = 9/377 (2%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYS 123
L+G MV+ P+ +S + + + KF++V+ + G+ ++ YN++I+
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++ A L +M P T +S+L+G + + +V MVE P
Sbjct: 112 RRSQLSFALAILGKMMK-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++ L K A + +R + + T G ++ L K G A+ +
Sbjct: 171 VTFTT--LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + I Y ++ LCK ++ L ++ +G P S ++ C
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+W + LLS +L++ + + +SL++ + ++ +A L ++ + ++ TY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ L++G R++EA +IF M + ++ +++ C K++ M+ +M +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 423 MGHKPDEATYKQVISGF 439
G + TY +I GF
Sbjct: 409 RGLVGNTVTYTTLIHGF 425
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
+ ++D+L + + A L+ M G+ P+ FT+S + LC G++ ++ +L+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
I +V+ +N +ID ++K+G A +EM R++ P TY+S+++G +++ +
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMHDRLD 362
Query: 166 VSDRIVGLMVEKKLLP---------KHFLSGNDYV--IQKLSDMGK--------TYA--- 203
+ +I LMV K LP F V ++ DM + TY
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 204 -----------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
A+M+FK+ + + T +L L K G++++A+ ++ + + +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y +CK + E+ L + +G P + + ++ C KG +E L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI--KIEKLKGSLDVATYDVLLDGL 370
+ + G L DS ++L+ + R DKA + + ++ + + D +TY ++ D +
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHL--RDGDKAASAELIKEMRSCRFAGDASTYGLVTD-M 599
Query: 371 FKDGRMEEA 379
DGR+++
Sbjct: 600 LHDGRLDKG 608
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
+DG+E++R M G V L+ ++ ++ A ++ MV DGV PN T++ +
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 89 AQILCRSGKFEVVLGL--------LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
LC++GK E + + ++ IY+ YN++ + K G +D + +
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT---YNIMSEGMCKAGKVEDGWDLFCSL-S 512
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--NDYVIQKLSDM 198
+ + P Y++++ G + E + + M E LP SG N + L D
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD---SGTYNTLIRAHLRDG 569
Query: 199 GKTYAAEMIFK-RAC 212
K +AE+I + R+C
Sbjct: 570 DKAASAELIKEMRSC 584
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 189/450 (42%), Gaps = 42/450 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++ + +M G P+V CN +L +L ++ ++ + + M+ G+ P+ T++++
Sbjct: 123 DAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILL 182
Query: 90 QILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG--- 141
LC GKF+ LL +SG+Y ++V YN ++++Y KKG + AA ++ M +
Sbjct: 183 NALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIG 242
Query: 142 ------------------------------RNLT-PGFSTYSSILDGARRYEKTEVSDRI 170
RN+ P TY++++ G R K EV+ ++
Sbjct: 243 VDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKV 302
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
M LLP + +I G A + + + T G +L L
Sbjct: 303 FDEMSLFNLLPNSITY--NTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGL 360
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K I + G+ V Y A ++ LCK EE LL D+++ P
Sbjct: 361 YKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDV 420
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ S + GK +E++ + GL+ + S+L+ YC + +A+ +
Sbjct: 421 VTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAV 480
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKE 409
+ D T +VL+ + G++EEA ++M + + +S +F +++ + +
Sbjct: 481 MNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KA D+M GH P TY ++ G
Sbjct: 541 ALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/463 (19%), Positives = 173/463 (37%), Gaps = 51/463 (11%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G + L Y +M G V CN L+ R ++ A M R G+ PN
Sbjct: 465 YCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPN 524
Query: 82 K-----------------------------------FTWSLVAQILCRSGKFEVVLGLLD 106
FT+ + + LC G L
Sbjct: 525 SVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH 584
Query: 107 -----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+V++N + + G+ A +NEM L F TY++++ G +
Sbjct: 585 RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNF-TYTNLIAGLCKK 643
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIE 217
K + L++ K + K LS N V L D G AA IF+ ++ +E
Sbjct: 644 GKI-----VAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVE 698
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
++ S++G+ + I + + + + Y ++ K H L
Sbjct: 699 PDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFML 758
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+D++ G++P + C + ++L + +G ++D F + L+ +C
Sbjct: 759 YKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCE 818
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSS 396
++ KA L ++ + +V TY+ L +GL + +A R+ + E V ++
Sbjct: 819 RNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQ 878
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ +C + ++ AMK DEM +G ++ G
Sbjct: 879 YITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGL 921
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 167/423 (39%), Gaps = 47/423 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFT 84
G D + + M F+P L+ L ++ +I A L G + G+ SPN
Sbjct: 609 GNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAV 668
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + L + G L + + + +V +N++ID YS+KG D L+ M
Sbjct: 669 YTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTM- 727
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL---MVEKKLLPKHF------------ 184
+NL +TY+ +L G Y K R L M+ LP F
Sbjct: 728 KSKNLCFNLATYNILLHG---YAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784
Query: 185 --------------LSGN-------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
L G+ + +I K + + A + K+ + DT
Sbjct: 785 KSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTY 844
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+ L + +A ++ ++ E G + Y +N +C+ + L ++
Sbjct: 845 NALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKT 904
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G + +S V K + +L +L+ ++ ++LM YC + K
Sbjct: 905 LGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAK 964
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVS 402
A+ L +E LDV Y+VL+ GL +G +E A ++++ MK+ + ++S +++++
Sbjct: 965 ALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLID 1024
Query: 403 RLC 405
C
Sbjct: 1025 SFC 1027
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 164/388 (42%), Gaps = 44/388 (11%)
Query: 7 GRDSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
+D + D A ++++D YS KG ++ M+ ++ N LL +++ +
Sbjct: 694 NKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMA 753
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVI 119
LY M+R G P+KF+W + C+S F+V + + L+ + +N++I
Sbjct: 754 RCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLI 813
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ ++ + AF+ + +M N + P TY+++ +G R + R++ +++E
Sbjct: 814 TKFCERNEMKKAFELVKQM-NQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS 872
Query: 180 LP--KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+P K +++ +I + +G A + I + +++ L+ +++
Sbjct: 873 VPTNKQYIT----LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIE 928
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC-AMELSRF 296
AI + L+ E I + + ++V CKE + LR ++E ++ + +
Sbjct: 929 NAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE-LRSIMEHCHVKLDVVAYNVL 987
Query: 297 VASQCGKGKWKEVEELLSAVLDKGL---------LLDSFCCSS----------------- 330
++ C G + +L + + L L+DSFC +
Sbjct: 988 ISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047
Query: 331 --LMEYYCSNRQIDKAIALHIKIEKLKG 356
L + +C + + D A+ LH+ L G
Sbjct: 1048 MRLNQQFCYSSRCDIAVVLHMNKIHLLG 1075
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/444 (19%), Positives = 181/444 (40%), Gaps = 30/444 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S++++ + G + E+ M G VP + L+ + ++ A Y M
Sbjct: 422 TFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVM 481
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDF 128
G + FT +++ CR GK E ++ G+ +SV ++ +I+ Y GD
Sbjct: 482 NHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDA 541
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGA----------RRYEKTEVSDRIVGLMVEKK 178
AF ++M N P TY +L G + + + V ++
Sbjct: 542 LKAFSVFDKM-NSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNT 600
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L SGN LSD A +I + ++ + + T ++ L K+G++
Sbjct: 601 KLTSTCRSGN------LSD-----AIALINEMVTNDFLP-DNFTYTNLIAGLCKKGKIVA 648
Query: 239 AIQIYHLISERGI-TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
A+ + E+G+ + + Y + V+ L K + +++ + P + + +
Sbjct: 649 ALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVII 708
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
KGK +V ++LS + K L + + L+ Y + + L+ + +
Sbjct: 709 DQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFL 768
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKN 416
D ++ L+ G + + A++I ++ E V+ +F +++++ C E++KA +
Sbjct: 769 PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFEL 828
Query: 417 HDEMLKMGHKPDEATYKQVISGFM 440
+M + P+ TY + +G +
Sbjct: 829 VKQMNQFMVIPNVDTYNALFNGLI 852
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V +A+Q ++L+ RG+ + L KE + + + ++ +G P +
Sbjct: 121 VGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNI 180
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C +GK+K LL + + G+ + ++L+ +YC + A L I K
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQL-IDCMASK 239
Query: 356 G-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
G +DV TY+V +D L +D R S+ +++ LK +R+ M
Sbjct: 240 GIGVDVCTYNVFIDNLCRDSR-----------------SAKGYLL-------LKRMRRNM 275
Query: 415 KNHDEMLKMGHKPDEATYKQVISGFM 440
P+E TY +ISGF+
Sbjct: 276 V----------YPNEITYNTLISGFV 291
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 19/400 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS---GKF 98
GF+ V A N+L+ + + ++ M G+ P+ +T++ + L S
Sbjct: 185 GFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESA 244
Query: 99 EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E V +++ G V YN +I Y K G+ A ++ +M RNL P TY +++
Sbjct: 245 ERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDM-EKRNLEPDKITYLTLIQ 303
Query: 157 GARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEMIF----KRA 211
+ + M E+ L +P H S VI L G+T +F K+
Sbjct: 304 ACYSEGNFDSCLHLYQEMEERGLEIPPHAYS---LVIGGLCKDGRTVEGSSVFENMNKKG 360
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
C + + ++ A K G V EAI ++ + G D Y VN LCK +
Sbjct: 361 CKANVAIYT----ALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRL 416
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+E + AM S + G+ E E+ ++++G DS+C ++L
Sbjct: 417 DEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNAL 476
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ + ++++A+ L ++EK V TY +L+ GLFK+ R EEA++++D M + +
Sbjct: 477 IDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGI 536
Query: 392 V-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+++SF + LC ++ +A K DE+ MG P+ A
Sbjct: 537 TPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETA 576
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 131/314 (41%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + A SLV+ G ++G V+ M G V+ AL+DA + + A
Sbjct: 325 GLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEA 384
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M +G P+ T+ ++ LC+SG+ + ++++
Sbjct: 385 INLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDE-----------------AVEYF---- 423
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
E C + YSS++DG + + + +++ MVE+ +
Sbjct: 424 ----------EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCY 473
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ GK A ++FKR E + T ++ L KE R +EA++++ L+
Sbjct: 474 --NALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLM 531
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + A LC + C +L ++ G IP + C G+
Sbjct: 532 IDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIP-ETAFEDMINVLCKAGRT 590
Query: 307 KEVEELLSAVLDKG 320
++ +L ++D+G
Sbjct: 591 EQACKLADGIVDRG 604
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 7/238 (2%)
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+AE +F+ KI + M+K K G K+A++ + + +R + Y +
Sbjct: 243 SAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLI 302
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
E + L +++ ERG S + C G+ E + + KG
Sbjct: 303 QACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCK 362
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEA 379
+ ++L++ Y N +++AI L E++KG D TY V+++GL K GR++EA
Sbjct: 363 ANVAIYTALIDAYGKNGNVNEAINL---FERMKGEGFEPDDVTYGVIVNGLCKSGRLDEA 419
Query: 380 VRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
V F++ K+ +V ++ F ++ L + +A K +EM++ G D Y +I
Sbjct: 420 VEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALI 477
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 168/408 (41%), Gaps = 22/408 (5%)
Query: 27 LFMDGLE-VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
+F++ E V+ +M P V + N ++ + + A + M + + P+K T+
Sbjct: 239 MFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITY 298
Query: 86 SLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKG---DFGAAFDRLNE 137
+ Q G F+ L L + G+ Y+LVI K G + + F+ +N+
Sbjct: 299 LTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNK 358
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
N+ + Y++++D + + + M + P G ++ L
Sbjct: 359 KGCKANV----AIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYG--VIVNGLCK 412
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A F+ D ++ + ++ L K GRV EA + + + ERG
Sbjct: 413 SGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYC 472
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y A ++ L K + EE L + + + G + ++ + + +E +L ++
Sbjct: 473 YNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMI 532
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
DKG+ + +L C + ++ +A + ++ + G + ++ +++ L K GR E
Sbjct: 533 DKGITPTTASFRALSVGLCLSGKVARACKILDELAPM-GVIPETAFEDMINVLCKAGRTE 591
Query: 378 EAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+A ++ D +V V R + LRKA N D +K+ H
Sbjct: 592 QACKLAD-----GIVDRGREVPGRVRTILINALRKA-GNADLAMKLMH 633
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 94/216 (43%), Gaps = 3/216 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++++ G V+E + ++ + E GI + +N L E + +V+E G
Sbjct: 196 LIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVF-EVMECG 254
Query: 286 YI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
I P + + + C G K+ E + + + L D +L++ S D
Sbjct: 255 KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSC 314
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSR 403
+ L+ ++E+ + Y +++ GL KDGR E +F+ M + ++ + + ++
Sbjct: 315 LHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDA 374
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A+ + M G +PD+ TY +++G
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGL 410
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+KG L+ F +SL+ + + +++ + + ++++ + T++ LL+GL +E
Sbjct: 183 EKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIE 242
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A R+F+ M+ K+ S+ ++ C +KAM+ +M K +PD+ TY +I
Sbjct: 243 SAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLI 302
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 196/437 (44%), Gaps = 30/437 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D +G + E++ MRV G VP V L+ L N+I A ++ AM G
Sbjct: 188 LIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVG 247
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V PN +T++ + C+ + L L L G+ V+ + ++ID K G+ AA
Sbjct: 248 VYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAAR 307
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK---LLPKHFLSGND 189
+ M ++TP + Y+S++D Y K + L +E + + P F
Sbjct: 308 NLFVNMIK-FSVTPNIAVYNSLIDA---YCKVGDVSEAMALFLELERFEVSPDVFTY--S 361
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I+ L + +T A IF++ E I T ++ KEG++ +A++I ++E
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + ++ CK + G+ ++V + P + + + C G KE
Sbjct: 422 GVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEA 481
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL---HIKIEKLKGSLDVA----- 361
+L S +LD G+ + + S L++ C + +I A+ L I+ + + ++D
Sbjct: 482 LKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPS 541
Query: 362 -----TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR-LCHLKELRKAMK 415
Y L+ GL +DG+ +AV++F M+ + +V+ R L +K + M
Sbjct: 542 LTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMM 599
Query: 416 NHDEMLKMGHKPDEATY 432
H +MLK G P+ A +
Sbjct: 600 LHADMLKFGVIPNSAVH 616
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 187/427 (43%), Gaps = 26/427 (6%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y M G P+V L+D RQ ++ A ++ M G+ P ++++ + LC
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228
Query: 94 RSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
K E + + + G+Y +V YN ++D Y K + A RL + G L P
Sbjct: 229 SDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQAL-RLYQDMLGEGLVPDV 287
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
T+ ++DG ++ + + + + M++ + P ++ + +I +G A +F
Sbjct: 288 VTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPN--IAVYNSLIDAYCKVGDVSEAMALF 345
Query: 209 KRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
E+ E+ D T +++ L R +EA I+ +++ GI Y + ++ C
Sbjct: 346 LEL--ERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCC 403
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
KE + ++ + + E G P + S + C + + S ++ K L D
Sbjct: 404 KEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVV 463
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+++++ +C + +A+ L+ + + + T LLDGL KDG++ +A+ +F
Sbjct: 464 TYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEK 523
Query: 387 KELK--------------VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
E + + + ++ ++ LC + KA+K +M + G +PDE Y
Sbjct: 524 IEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIY 583
Query: 433 KQVISGF 439
++ G
Sbjct: 584 VVMLRGL 590
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 12/185 (6%)
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK-----GKWKEVEELLSA 315
V L K H+P C L + R ++ S+F + G+ K + VEE LS
Sbjct: 84 LVQNLVKSHKPYHACQLAFSELSR------LKSSKFTPNVYGELIIVLCKMELVEEALSM 137
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
G L C+ L+ + + ++ ++ S V T+ L+DG + G
Sbjct: 138 YHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGD 197
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+ A +FD M+ +V + + I++ LC ++ +A H M ++G P+ TY
Sbjct: 198 LLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNT 257
Query: 435 VISGF 439
++ G+
Sbjct: 258 LMDGY 262
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + S ++D Y + +Y M + P V A++D + ++
Sbjct: 421 NGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKE 480
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI 109
A LY M+ +G++PN +T S + LC+ GK L L I
Sbjct: 481 ALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKI 524
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 11/439 (2%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
R+ +DA+ + C L + + R +GF +V NALLD R R A
Sbjct: 21 REISTDAVVKIFQCLKDADLAWELFQCLSSPR-FGFQHSVHTGNALLDVFARTKRHREAG 79
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSV-MYNLVIDF 121
L + P+ TW+++ C + + E ++ D G+ S+ +NLV+
Sbjct: 80 NLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHG 139
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G AA D E T TY++I+D + +K + + ++ + P
Sbjct: 140 LCKSGKVLAAMDHF-ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTP 198
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
++ + ++ L MG+ A + ++ D T ++ L KE R EA +
Sbjct: 199 T--IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 256
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ ++ RG+ + Y A + L + + + + + + +G +P + LS + C
Sbjct: 257 LFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 316
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ + ++ +GL + S+L+ C R++D A+ + +++K + D
Sbjct: 317 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 376
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY++L+DGL K G +E A FD M E ++ I+VS C A D+M
Sbjct: 377 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Query: 421 LKMGHKPDEATYKQVISGF 439
P+ TY +ISG
Sbjct: 437 SSSHCSPNVVTYGTLISGL 455
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 169/398 (42%), Gaps = 11/398 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M YG P++ N +L L + ++ A + +G + + T++ + L
Sbjct: 117 IREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLA 176
Query: 94 RSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
++ K + + L++ +G ++ YN +++ K G A D L ++ + TP
Sbjct: 177 KNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDV 235
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++DG + +++ + ++ M + L+ +I+ L GK A ++
Sbjct: 236 VTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCY--TALIRGLLQAGKIPQASSVY 293
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
K + T M+ L K GR+ A++I+ + RG+ + Y A ++ LCK
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ + +L + + P + + + C G + +L+ G D +
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ +C D A + + S +V TY L+ GL K ++ +A F +MKE
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473
Query: 389 LKVVSSSSFVI--VVSRLCHLKELRKAMKNHDEMLKMG 424
+ SFV +V LC +L DEM + G
Sbjct: 474 -RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 200/465 (43%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + R G +P+V A N +L L ++ + A ++ M RD + PN
Sbjct: 211 YGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PN 269
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC++G E + D+ G++ +V N++ID K +L+
Sbjct: 270 LPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKA-------QKLD 322
Query: 137 EMC------NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK----HFLS 186
E C + + +P +T+ S++DG + + + + RI M++ +P L
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
N + + D K Y M + C + L + C+ KA
Sbjct: 383 RNFFKCDRKEDGHKMYKEMM--RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARG 440
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G +E ++Y+ + ++G + Y ++ CK + +
Sbjct: 441 FLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAY 500
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ G+ P + V + E L G+ L+ SSL++ +
Sbjct: 501 QLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGF 560
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
++D+A + ++ + + +V T++ LLDGL K + EA+ F MK+LK +
Sbjct: 561 GKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQ 620
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+++ LC +++ KA EM K G KP+ TY +ISG
Sbjct: 621 ITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGL 665
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 198/470 (42%), Gaps = 53/470 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++ +DC+ G + + M+ G VP +++ L + N + A ++ M +
Sbjct: 135 NVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQ 194
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ P + ++ + +GKF+ LL+ I S V YN ++ KKG
Sbjct: 195 NRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDK 254
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM R+ P TY+ I+ + E + ++ M E L P + +
Sbjct: 255 ALRIFEEM--KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN--VRTINI 310
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC-MLKALSKEGRVKEAIQIYH----- 244
+I +L K A IF+ D K+ D C ++ L K+GRV +A +IY
Sbjct: 311 MIDRLCKAQKLDEACSIFE-GMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDA 369
Query: 245 -----------LISERGITVRDSDYY-------------------AFVNVLCKEHQPEEV 274
LI R D + +++ + K + E+
Sbjct: 370 DQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKG 429
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ RG++P S + S G +E EL A+ D+G +LD+ +++++
Sbjct: 430 RALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDG 489
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELK 390
+C + +++KA L +++ + V TY ++DGL K R++EA +F+ K EL
Sbjct: 490 FCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELN 549
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
V SS + ++ + E M +EM++ G P+ T+ ++ G +
Sbjct: 550 QVIYSSLIDGFGKVGRVDEAYLVM---EEMMQKGLTPNVYTWNCLLDGLV 596
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 202/504 (40%), Gaps = 87/504 (17%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ LV C + L ++ ++ +MMR + F PA SA L+ AL E L+ M
Sbjct: 30 VELVASCVKSRKL-IEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQ 88
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---SGIYSS--VMYNLVIDFYSKKGDFG 129
G N + + ++ R G+ + L LLD S + + V+YN+ ID + K G
Sbjct: 89 ELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVD 148
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A+ +EM L P TY+S++ + + + + I M + + +P + +
Sbjct: 149 MAWKFFHEM-KANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAY--AYN 205
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI------- 242
+I GK A + +R + C+L L K+G+ +A++I
Sbjct: 206 TMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRD 265
Query: 243 -------YHLI---------SERGITVRDSDYYA--FVNV---------LCKEHQPEEVC 275
Y++I E VRD+ A F NV LCK + +E C
Sbjct: 266 AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEAC 325
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV-------------EELLSAVLDKGLL 322
+ + Y C+ + + F + G GK V +++ + V+ L+
Sbjct: 326 SIFEGM---DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382
Query: 323 LDSFCC----------SSLMEYYCS------NRQID---------KAIALHIKIEKLKGS 357
+ F C +M CS N +D K AL +I K +G
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEI-KARGF 441
Query: 358 L-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFVIVVSRLCHLKELRKAMK 415
L D +Y +L+ L K G E ++ MK+ V+ + ++ V+ C ++ KA +
Sbjct: 442 LPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 501
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+EM MGH P TY V+ G
Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGL 525
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 142/360 (39%), Gaps = 43/360 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y+ M G P + N +D +++ E L+ + G P+ ++S++
Sbjct: 393 DGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILI 452
Query: 90 QILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L ++G +E+ + D G + + YN VID + K G A+ L EM
Sbjct: 453 HSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTMGH 511
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY S++DG + K+ + + Y
Sbjct: 512 HPTVVTYGSVVDG----------------------------------LAKIDRLDEAY-- 535
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M+F+ A IEL ++ K GRV EA + + ++G+T + ++
Sbjct: 536 -MLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDG 594
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K + E + + + P + + C K+ + + +GL +
Sbjct: 595 LVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPN 654
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++++ + + +A +L + G D A+Y+ +++GL R +A ++F+
Sbjct: 655 TITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFE 714
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 193/436 (44%), Gaps = 9/436 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + +L+ +G + +E+ M + VP + N +++ L ++ + A
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDF 121
L M+ +G PN+FT+ + +C+SG L LL + V Y ++ID
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G A +EM + + TY+S++ + + + +++ M+ +K+ P
Sbjct: 275 LCKDGRLDDALSFFSEM-ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP 333
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I L GK A+ ++ IE T ++ L + R+ EA Q
Sbjct: 334 N--VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ 391
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ L+ +G Y +N CK Q ++ L R + RG I + S + C
Sbjct: 392 MMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFC 451
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K +++ ++ +G+ + L++ C N ++++A+ + ++ K K LD+
Sbjct: 452 QSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIG 511
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEM 420
Y++++ G+ ++++A +F + V S+ I++S LC L +A +M
Sbjct: 512 IYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM 571
Query: 421 LKMGHKPDEATYKQVI 436
+ G++PD TY +I
Sbjct: 572 KEDGYEPDGCTYNTLI 587
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/409 (19%), Positives = 181/409 (44%), Gaps = 34/409 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + + M + G + N +++ R+ ++ A G + + G PN T++ +
Sbjct: 110 LALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNG 169
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
LC G+ + L+D + S + +L+ T
Sbjct: 170 LCLEGRVFEAVELVDCMVLSQHVPDLI-------------------------------TL 198
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++I++G ++ + ++ M+ P F G ++ ++ G T +A + ++
Sbjct: 199 NTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGP--ILNRMCKSGNTASALDLLRKM 256
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
KI+ T ++ L K+GR+ +A+ + + +GI Y + + C +
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LLRD++ R P + S + S +GK E ++L + ++ +G+ ++ +SL
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ C+++++D+A + + D+ TY++L++G K ++++ +R+F M +
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM 436
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + ++ ++ C ++L A K EM+ G P TY ++ G
Sbjct: 437 IADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 166/389 (42%), Gaps = 27/389 (6%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVID 120
A L+ +M+R P ++ + +L R+ ++++VL L L Y N++I+
Sbjct: 74 AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVE 176
+ ++ G AF + ++ P T++++L+G R +E E+ D MV
Sbjct: 134 CFCRRRKLGFAFSAMGKIFK-LGYEPNTVTFNTLLNGLCLEGRVFEAVELVD----CMVL 188
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+ +P L + ++ L + A + R + T G +L + K G
Sbjct: 189 SQHVPD--LITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNT 246
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
A+ + + R I Y ++ LCK+ + ++ ++ +G +
Sbjct: 247 ASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ S C G+W + +LL ++ + + + S+L++ ++ +A L+ ++
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------SFVIVVSRLCHLKEL 410
+ TY+ L+ GL D R++EA ++ D M VS ++ I+++ C K++
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLM-----VSKGCDPDIWTYNILINGFCKAKQV 421
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ +M G D TY +I GF
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGF 450
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 150/391 (38%), Gaps = 39/391 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ G L++ R M P V ++D L + + A + M G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
+ N FT++ + C G+++ LL I + N+V ID K+G A
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--------------- 177
D NEM R + P TY+S++ G ++ + +++++ LMV K
Sbjct: 356 DLYNEMIT-RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414
Query: 178 -----------KLLPKHFLSGN-------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+L K L G +IQ K A+ +F+ + +
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L G ++EA+ I + + + + Y ++ +C ++ ++ L
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFC 534
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ +G + ++ C + E + L + + G D ++L+ +
Sbjct: 535 SLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGN 594
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
I ++ L ++++ S D +T +++D L
Sbjct: 595 DITTSVQLIEEMKRCGFSSDASTVKIVMDML 625
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ L + ++ +P ++ +R ++ V L + KG+ D + +
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-E 388
++ +C R++ A + KI KL + T++ LL+GL +GR+ EAV + D M
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
V + +V+ LC + +A+ M+ G +P++ TY +++
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILN 238
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 184/401 (45%), Gaps = 9/401 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P + N L+ L+ + ++ A L MV +G P+ T++ + +CRSG +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL + + + V Y+ +ID + G AA EM + + TY+S++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVR 271
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K ++ MV ++++P + ++ N ++ GK A ++K I
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVP-NVITFN-VLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + R+ EA + L+ + + + + C + ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ R++ +RG + A+ S V C GK K EEL ++ G+L D L++ C
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
N +++KA+ + ++K K L + Y +++G+ K G++E+A +F + V +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ +++S LC L +A +M + G+ P++ TY +I
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 175/380 (46%), Gaps = 9/380 (2%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVID 120
A L+ M+R P+ +S + R+ +F +VL L+ ++ N++I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A+ L ++ P +T+++++ G K + +V MVE
Sbjct: 132 CFCRCCKTCFAYSVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ + G T A + ++ + ++ T ++ +L ++G + AI
Sbjct: 191 PD--VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + +GI Y + V LCK + + LL+D+V R +P + + +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+GK +E EL ++ +G+ + ++LM+ YC ++ +A + + + K S D+
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T+ L+ G R+++ +++F + + +V+++ ++ I+V C +++ A + E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G PD TY ++ G
Sbjct: 429 MVSHGVLPDVMTYGILLDGL 448
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 187/440 (42%), Gaps = 60/440 (13%)
Query: 25 KGLFMDG------LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
KGLF++G + V RM+ G P V N++++ + R + LA L M V
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFD 133
+ FT+S + LCR G + + L GI SSV+ YN ++ K G +
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND---- 189
L +M + R + P T++ +LD + K + ++ + M+ + + P + ++ N
Sbjct: 285 LLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP-NIITYNTLMDG 342
Query: 190 YVIQ-KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
Y +Q +LS+ +++ + C I T ++K RV + ++++ IS+
Sbjct: 343 YCMQNRLSEANNML--DLMVRNKCSPDIV----TFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ Y V C+ + + L +++V G +P M + C GK ++
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 309 V----EELLSAVLDKGLLL------------------DSFCC-------SSLMEY----- 334
E+L + +D G+++ + FC ++M Y
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 335 -YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + +A L K+E+ + + TY+ L+ +DG + + ++ + MK +
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 394 SSSFVIVVSRLCHLKELRKA 413
+S + +V + EL K+
Sbjct: 577 DASSIKMVIDMLLSGELDKS 596
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 142/327 (43%), Gaps = 10/327 (3%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ E R+ ++D S ++D G + +++ M G +V N+L+ L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM 114
+ + + L MV + PN T++++ + + GK E+ ++ GI +++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++D Y + A + L+ M + +P T++S++ G ++ + ++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ ++ L+ ++Q GK AE +F+ + T G +L L
Sbjct: 394 ISKRGLVANAVTYS--ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G++++A++I+ + + + + Y + +CK + E+ L + +G P M
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKG 320
+ ++ C KG E LL + + G
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ L ++++ +P ++ SRF ++ ++ V + + G+ + + +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE- 388
++ +C + A ++ K+ KL D T++ L+ GLF +G++ EAV + D M E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 389 ---LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
VV+ +S +V+ +C + A+ +M + K D TY +I
Sbjct: 188 GCQPDVVTYNS---IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 175/406 (43%), Gaps = 11/406 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V L+D R ++ A L M G PN T++ + LC K +
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSA 203
Query: 102 LGLL----DSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
L L +SG Y+ ++D K G A RL E + +P TYSS+L
Sbjct: 204 LQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC-RLVEAMVSKGCSPNVVTYSSLL 262
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + K + + ++ M P + + +I +G+ A + + D
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPN--IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T +L A K G+ ++AI + ++ E+G Y + +++ CK+ + E C
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++++G +P + + +A C K E LL +L + D +++++
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C ++D A L I++ + ++ TY+ L+ GL K R ++A + M + S
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500
Query: 396 --SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ V+ LC K + +A K +ML G PD+ TY VIS
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 192/434 (44%), Gaps = 16/434 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D G D + M G P V ++LL L + ++ A+ L M R
Sbjct: 224 STIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 283
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGA 130
G SPN T++ + C+ G+ + LL D G +V+ Y +++D + K G
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M + P TY+S+LD + ++ E + +++ M++K +P + +
Sbjct: 344 AIGLVEVMVE-KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN--VVSYNT 400
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI L K + ++ ++ T ++ A+ K RV A ++++LI E G
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWKEV 309
T Y + V+ LCK + ++ LLR++ + G P + + + C +
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA---IALHIKIEKLKGSLDVATYDVL 366
+L +L GL D S ++ C R +D+A + L +K G++ TY L
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI---TYGTL 577
Query: 367 LDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+DG K G +++A+ I + + +F I + L LR+A + + ML+ G
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637
Query: 426 KPDEATYKQVISGF 439
PD TY ++ GF
Sbjct: 638 VPDTVTYNTLLKGF 651
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 200/486 (41%), Gaps = 85/486 (17%)
Query: 31 GLEVYRMMRVYGFVPA-VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
L++++ M G P V + ++D+L + ++ A L AMV G SPN T+S +
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC++GK + LL S V YN +ID + K G A+ L EM +G
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG-GC 321
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---------------- 188
P TY+ +LD + K E + +V +MVEK +P F +
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381
Query: 189 -----------------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
+ VI L K + ++ ++ T ++ A+
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV---------- 281
K RV A ++++LI E G T Y + V+ LCK + ++ LLR++
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501
Query: 282 ---------------VERGY-----------IPCAMELSRFVASQCGKGKWK---EVEEL 312
V+R Y P + S ++S C KW+ E +
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC---KWRFMDEANNV 558
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLF 371
L +L G + +L++ +C +DKA+ + +++ KGS DV T+ + +D L
Sbjct: 559 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI-LQLLLSKGSYPDVVTFSIFIDWLS 617
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K GR+ +A + + M +V + ++ ++ C A+ + M + G +PD A
Sbjct: 618 KRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNA 677
Query: 431 TYKQVI 436
TY ++
Sbjct: 678 TYTTLV 683
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 177/398 (44%), Gaps = 14/398 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N +++ L + + + A L MV +G +PN F+++ V C++ + E L LL+ +
Sbjct: 48 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVM 107
Query: 111 SS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
V Y VI+ K A +++M R P TY +++DG R +
Sbjct: 108 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ-RGCQPNVITYGTLVDGFCRVGDLD 166
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TC 223
+ +V M E+ P N ++ L K +A +FK +E D T
Sbjct: 167 GAVELVRKMTERGYRPNAITYNN--IMHGLCSGRKLDSALQLFKEM-EESGSCPPDVFTY 223
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ +L K G+V +A ++ + +G + Y + ++ LCK + +E LL+ +
Sbjct: 224 STIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 283
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P + + + C G+ E LL ++D G + + L++ +C + +
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343
Query: 344 AIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
AI L +++ KG + ++ TY+ LLD K +E A ++ M + V + S+ V+
Sbjct: 344 AIGL-VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC ++ + + ++ML PD T+ +I
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 48/381 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++LD + G D + + +M G+VP + N+LLD +++E+ A L +M++
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G PN +++ V LC++ K + LL+ + ++ V +N +ID K
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A++ N + TP TY+S++ G +RR+++ E
Sbjct: 449 AYELFN-LIQESGCTPNLVTYNSLVHGLCKSRRFDQAE---------------------- 485
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y+++ EM K+ C I T ++ L K RV A +++ +
Sbjct: 486 --YLLR-----------EMTRKQGCSPDII----TYNTVIDGLCKSKRVDRAYKLFLQML 528
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G+ D Y ++ LCK +E +L +++ G+ P A+ + C G
Sbjct: 529 SDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLD 588
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ E+L +L KG D S +++ ++ +A L + + D TY+ LL
Sbjct: 589 KALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL 648
Query: 368 DGLFKDGRMEEAVRIFDYMKE 388
G R E+AV +F+ M++
Sbjct: 649 KGFCDASRTEDAVDLFEVMRQ 669
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 54/338 (15%)
Query: 107 SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
+G++ S++ L G A EM + P TY+++++G + ++ +
Sbjct: 10 AGVHKSILRGLC-----DAGQCSDAVLHFREM--SKTCPPDSVTYNTMINGLSKSDRLDD 62
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ R++ MV+ P F +Y +
Sbjct: 63 AIRLLEEMVDNGFAPNVF----------------SYNT---------------------V 85
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L K RV+ A+ + + RG Y +N LCK Q +E C ++ +++RG
Sbjct: 86 LHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 145
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + V C G EL+ + ++G ++ +++M CS R++D A+
Sbjct: 146 QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQ 205
Query: 347 LHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIV 400
L ++E+ GS DV TY ++D L K G++++A R+ + M VV+ SS
Sbjct: 206 LFKEMEE-SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL--- 261
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ LC +L +A M + G P+ TY +I G
Sbjct: 262 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 122/302 (40%), Gaps = 10/302 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G+ + M VP + N ++DA+ + + +A L+ + G +PN T++ +
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472
Query: 90 QILCRSGKFEVVLGLL-----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
LC+S +F+ LL G ++ YN VID K A+ +M +
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD-G 531
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L P TYS ++ ++ + ++ ++ LM++ P G +I G
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT--LIDGFCKTGNLDK 589
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A I + + T + LSK GR+++A ++ + G+ Y +
Sbjct: 590 ALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 649
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE-VEELLSAVLDKGLL 322
C + E+ L + + G P + V K +K+ + E+ +++D G
Sbjct: 650 GFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFK 709
Query: 323 LD 324
L+
Sbjct: 710 LN 711
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
DS ++++ + ++D AI L ++ + +V +Y+ +L G K R+E A+ +
Sbjct: 43 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 102
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M S+ V++ LC L ++ +A + D+M++ G +P+ TY ++ GF
Sbjct: 103 EQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 176/426 (41%), Gaps = 36/426 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + + M+ G VP N L++ + +++ A L M
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G++PN T+S V CR K + L + + M NLV
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV----------------- 232
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
TY+++L G R + + ++ M E+ L P F D ++ L
Sbjct: 233 --------------TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF--SYDTLMAGL 276
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
GK A +F+ + ++ L K GR+ EA +++ + E
Sbjct: 277 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV 336
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ A ++ LCK + +E +L + +R P + S + C G+ ++ +E+
Sbjct: 337 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ +G+ + +SL+ +C +D A+ L ++ D+ TY+ L+DGL K GR
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Query: 376 MEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
EA R+F MK K + ++ ++ C L+ + A D+MLK PD T+
Sbjct: 457 APEANRLFGDMKA-KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 515
Query: 434 QVISGF 439
++ G+
Sbjct: 516 TLVEGY 521
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 175/404 (43%), Gaps = 12/404 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF V N L +AL R I + G++PN FT+++V Q LC+SG +
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 102 LGLL----DSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL +SG + + +YN VI K + A D M +N+ T++ ++D
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVI----TWTIMID 134
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + M +K +P + + +I + K + A ++ K + +
Sbjct: 135 GLCKANRLPEATTYFAKMKKKGTVPNEWTY--NVLINGFCKVHKVHRAYLLLKEMKESGL 192
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ ++ +V A +++ + E G Y ++ LC+ +E
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL ++ ERG P +A C GK ++ + D S+L+ C
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
++D+A L K+ + DV T+ L+DGL K R++EA ++ + M++ +
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ LC ++R A + M+ G +P+ TY +I GF
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 179/416 (43%), Gaps = 15/416 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+++R M G +P + N LL L R + A L M G+ P+KF++ + L
Sbjct: 217 KLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 276
Query: 93 CRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNL 144
C++GK ++ L + + V Y+ +I K G A F+++ E +
Sbjct: 277 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRE----NSC 332
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+++++DG + ++ + + +++ M ++ P + +I L G+ A
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS--LIDGLCKTGQVRDA 390
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ +FKR IE T ++ V A+ + ++ G Y ++
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + E L D+ + P + S + C + L +L + +L D
Sbjct: 451 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 510
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S+L+E YC+ +D A L ++ S DV TY L+DG K GRM EA R+
Sbjct: 511 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 570
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + + ++ ++ C + A + +EM+ G +P+ TY+ +I GF
Sbjct: 571 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 193/436 (44%), Gaps = 19/436 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A S ++ G + +++ MR P V AL+D L + + ++ A + M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
+PN T+S + LC++G+ EV ++ GI +V+ YN +I +
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---- 184
+A + EM P TY++++DG + + ++R+ G M K P
Sbjct: 423 DSALLLMEEM-TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
L G ++++ DM +T +M+ + + + T +++ G V +A ++
Sbjct: 482 LIGGFCKLERI-DMARTLFDDMLKQAVLPDVV-----TFSTLVEGYCNAGLVDDAERLLE 535
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + Y + V+ CK + E +L+ + +RG P + + + + C G
Sbjct: 536 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATY 363
K LL ++ G+ + SL+ +C +++A + ++E+ + D+ Y
Sbjct: 596 KPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAY 655
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEM-L 421
V++DGL + GRM A+ + + +K+ +V ++ LC KEL KAM+ +EM L
Sbjct: 656 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 715
Query: 422 KMGHKPDEATYKQVIS 437
+P+ Y+ VI
Sbjct: 716 SRKSRPNAEAYEAVIQ 731
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 182/397 (45%), Gaps = 5/397 (1%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + N ++D L+++ ++ A Y M+ VSP+ T++ + L ++ + + +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 105 LDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
L + + YN ++ Y G A +MC+ + P TY+S++D + K
Sbjct: 69 LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSD-GIEPDVVTYNSLMDYLCKNGK 127
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ +I MV++ L P G ++ + G + ++L
Sbjct: 128 CTEARKIFDSMVKRGLKPDITTYGT--LLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ A +K+ +V E + ++ + ++G+T +Y ++ LCK + ++ +++
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+G P + + + + C KW++ EEL+ +LD+G+ + +++++ C ++ +
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
+ L + + + DV TY L+DG G+M+ A+++ M + + S ++ +++
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLIN 365
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + + A+ EM G PD TY ++ G
Sbjct: 366 GYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 168/385 (43%), Gaps = 49/385 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N+++ AL + + A + MV PN FT++ + C SG+ E +G+
Sbjct: 44 PDAVTYNSIIAALSKAQAMDRAMEVLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGI 99
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-A 158
GI V+ YN ++D+ K G A + M R L P +TY ++L G A
Sbjct: 100 FRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVK-RGLKPDITTYGTLLHGYA 158
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ E+ D ++ LMV+ + H + + +I + K ++F + + +
Sbjct: 159 SKGALVEMHD-LLALMVQNGMQLDHHVF--NILICAYTKQEKVDEVVLVFSKMRQQGLTP 215
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
++ L K GR+ +A+ + + ++G+T Y + ++ LC + E+ L+
Sbjct: 216 NAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELI 275
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL-------------------------- 312
+++++G P + + + S C +G+ E ++L
Sbjct: 276 FEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLA 335
Query: 313 ---------LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
L+ ++ GL DS S+L+ YC +++ A+AL ++E + D+ TY
Sbjct: 336 GKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITY 395
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKE 388
+++L GLF+ R A ++ + E
Sbjct: 396 NIILHGLFRTRRTAAAKELYARITE 420
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ MR G P ++D L + + A + M+ G++PN ++ + LC
Sbjct: 204 VFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALC 263
Query: 94 RSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNEMCNGRNLT 145
K+ E++ +LD GI + V +N ++D K+G + FD L + +
Sbjct: 264 TYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI----GVN 319
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS+++DG K + + +++ MV L P +I + + A
Sbjct: 320 PDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST--LINGYCKINRMEDAL 377
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+FK + T +L L + R A ++Y I+E G + S Y
Sbjct: 378 ALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTY 430
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 202/466 (43%), Gaps = 43/466 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+L++ + KG D L M+ +G P N LL+A R+ + A L M
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266
Query: 75 RDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFG 129
+DGV+P + T++ + R G +VV + +G + YN++ + G
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF +EM L P TY+++ D + + + R++ M EK + K L ++
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGV--KATLVTHN 384
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
VI+ L G+ A + D+ + T ++ A K G + +A + + R
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-------------------CA 290
G+ + + LCKE + EE GLL+ +RG++P A
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 291 MEL----------------SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ L + + G+ KE + L+ +++KGL+ D + ++
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVS 393
YC ++ A H K+ + DV T + L++GL +G++++A+++F+ ++++ K V
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD 624
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ +C ++ A+ +M G +PD TY V+S
Sbjct: 625 VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 187/445 (42%), Gaps = 44/445 (9%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R+ +P V N L DA ++ A L M GV T ++V + LC+ G
Sbjct: 335 MERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDG 394
Query: 97 KFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ E LG L D G+ V+ YN +I + K G+ A+ ++EM R L T
Sbjct: 395 ELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVR-RGLKLDTFTL 453
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+++L + ++ E + ++ ++ +P G V+ + A ++
Sbjct: 454 NTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT--VMAAYFKEYNSEPALRLWDEM 511
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
++K+ T ++K LS+ GR+KEAI + + E+G+ D+ Y ++ CKE
Sbjct: 512 IEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDL 571
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E +VE + P + + + C GK + +L + ++KG +D ++L
Sbjct: 572 ENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTL 631
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C + +D A+ +E D TY+V+L L + GR EEA + + E
Sbjct: 632 IQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT 691
Query: 392 VSSS------------------------------------SFVIVVSRLCHLKELRKAMK 415
+S S ++ +V+ LC + ++A
Sbjct: 692 LSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKA 751
Query: 416 NHDEMLKMGHKPDEATYKQVISGFM 440
DEM++ G D +TY ++ G +
Sbjct: 752 ILDEMMQKGMSVDSSTYITLMEGLV 776
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 185/416 (44%), Gaps = 36/416 (8%)
Query: 45 PAVSACNALLDALYRQNEIRLASCL--YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P++ A NA+L AL R + L + ++V + PN +T++L+ C G L
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224
Query: 103 GLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L + G+ +V YN +++ + +KG G A L M + P TY++++
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM-KKDGVAPTRPTYNTLVSA 283
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
R + + ++V M P L + + L GK DE
Sbjct: 284 YARLGWIKQATKVVEAMTANGFEPD--LWTYNVLAAGLCQAGK-----------VDEAFR 330
Query: 218 LQDDT--CGCMLKALSKEGRV----------KEAIQIYHLISERGITVRDSDYYAFVNVL 265
L+D+ G +L + + +A+++ + E+G+ + + L
Sbjct: 331 LKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGL 390
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + E G L + + G P + + + + C G + L+ ++ +GL LD+
Sbjct: 391 CKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT 450
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFD 384
F ++++ C ++ ++A L ++ +G + D +Y ++ FK+ E A+R++D
Sbjct: 451 FTLNTVLYNLCKEKRYEEAQGL-LQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWD 509
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E K+ S S++ ++ L + L++A+ +E+++ G PD+ TY +I +
Sbjct: 510 EMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAY 565
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 163/403 (40%), Gaps = 51/403 (12%)
Query: 25 KGLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL DG L M G P V N L+ A + I A L MVR G+
Sbjct: 388 KGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLK 447
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDR 134
+ FT + V LC+ ++E GLL S + V Y V+ Y K+ + A
Sbjct: 448 LDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRL 507
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+EM + LTP STY++++ G R + E D++ LM EK L+P + + +I
Sbjct: 508 WDEMIE-KKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELM-EKGLVPDD--TTYNIIIH 563
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
G A + + + TC ++ L G++ +A++++ E+G V
Sbjct: 564 AYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV 623
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y + +CK+ + D+ RG P A + +++ G+ +E + +L
Sbjct: 624 DVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNML 683
Query: 314 SAVLDKGLLLDSFCC-----------------------------------SSLMEYYCSN 338
+ + G L SF + L+ C++
Sbjct: 684 HKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTS 743
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK-DGRMEEAV 380
Q +A A+ ++ + S+D +TY L++GL K R+ AV
Sbjct: 744 GQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTHAV 786
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 192/427 (44%), Gaps = 9/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+++C+S G V+ + G+ P L+ L + E+ A + +V
Sbjct: 97 NLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVA 156
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIY--SSVMYNLVIDFYSKKGDFGA 130
G ++ ++ + LCR G+ + + LL D + + VMY+ +ID K
Sbjct: 157 QGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVND 216
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AFD EM + R ++P TYSS++ G K + + + M+ + P +
Sbjct: 217 AFDLYCEMVSKR-ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFS--I 273
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I GK A+ + + ++L T ++ +V +A +++++++RG
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T Y +N CK +E L ++ + P + + V C G+
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+ + D+G + +S+++ C N +DKAI L KI++ D+ TY VL++GL
Sbjct: 394 ELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Query: 371 FKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K GR+++A ++F D + + + ++ +++ C+ + + +M G P+
Sbjct: 454 CKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNA 513
Query: 430 ATYKQVI 436
TY+ +I
Sbjct: 514 ITYEILI 520
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 158/350 (45%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++D++ + + A LY MV +SP+ T+S + C GK + + L
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I ++ ++++ID + K+G A + L M +N+ TY+S++DG
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMK-KNVKLDVVTYNSLMDGYC 314
Query: 160 RYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
++ + + +M ++ + P + + N + K+ D EM K+ +
Sbjct: 315 LVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVV 374
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR A+++ + +RG Y + ++ +CK + ++
Sbjct: 375 -----TYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL + E+G P + + C G+ + +++ +L KG + + +SL+ +C
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ D+ +A+ K++ + TY++L+ LF+ ++A ++ M
Sbjct: 490 NKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 206/479 (43%), Gaps = 48/479 (10%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGL---FMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+ S GR + A L++ YS + F ++V+ ++ G P++ CN L +L
Sbjct: 138 LTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLV 197
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM 114
+ NE C ++ +G P+ F+++ V LC+ GK E + L GI +V+
Sbjct: 198 KANEFE-KCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVV 256
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I+ + G AF+ L E + + P TY ++++G + + + I+
Sbjct: 257 TYNCIINGLCQNGRLDNAFE-LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDE 315
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+ P + N +I MG A I + I T +++ K
Sbjct: 316 MIGAGFNPNVVVFNN--LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKS 373
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ-----------------PEE--- 273
+++ A I G+++ + Y+ V+ LCK+ + P +
Sbjct: 374 DQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 433
Query: 274 ---VCGLLRD------------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
VCGL +D ++E+G + + + CG GK E ++ +L+
Sbjct: 434 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE 493
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+GL +D ++L+ +C+ +++ L ++ K D+ TY+ LL GL G++++
Sbjct: 494 RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDD 553
Query: 379 AVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A++++D K ++S+ ++ I++ C + +E+L + + Y +I
Sbjct: 554 AIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 612
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 189/474 (39%), Gaps = 79/474 (16%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
GF P V N L+D + I A + M+ ++P T + Q C+S + E
Sbjct: 320 GFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA 379
Query: 100 --VVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+ +L SG I+ Y+ V+ + KK + +AF R +M RN P + ++
Sbjct: 380 ENALEEILSSGLSIHPDNCYS-VVHWLCKKFRYHSAF-RFTKMMLSRNFRPSDLLLTMLV 437
Query: 156 DG----ARRYEKTEV-------------------------------SDRIVGLMVEKKLL 180
G + E TE+ + RIV M+E+ L
Sbjct: 438 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL- 496
Query: 181 PKHFLSGNDYVI---------------QKLSDMG---KTYAAEMIFKRAC-----DEKIE 217
P ++ N ++ ++++ G Y + + C D+ I+
Sbjct: 497 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 556
Query: 218 LQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
L D+ T G M++ K R+++ +++ + + + + Y + C
Sbjct: 557 LWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHC 616
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ LL ++ +G +P S + C G ++ + L+ + +G + +
Sbjct: 617 QNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVV 676
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
C ++L+ YC Q+D A + +++ + TY V++DG K G ME+A + M
Sbjct: 677 CYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKM 736
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KE +V ++ ++ + C ++ A K D+M G DE TY ++ G+
Sbjct: 737 KESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 164/387 (42%), Gaps = 15/387 (3%)
Query: 12 SDALSLVLD-CYS------HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
S LS+ D CYS K + +MM F P+ L+ L + +
Sbjct: 388 SSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL 447
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVI 119
A+ L+ ++ G +K T + + LC +GK +V +L+ G+ + YN +I
Sbjct: 448 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 507
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ +G F RL E R + P TY+ +L G K + + ++ L
Sbjct: 508 LGFCNEGKVEGCF-RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 566
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ G +++ + E +F +K+EL ++KA + G V A
Sbjct: 567 ISNIHTYG--IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+Q+ + +GI + Y + ++ +C E+ L+ ++ + G++P + + +
Sbjct: 625 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ E ++ + + F + +++ YC ++KA L IK+++ D
Sbjct: 685 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 744
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYM 386
V TY+VL +G K M+ A ++ D M
Sbjct: 745 VVTYNVLTNGFCKANDMDNAFKVCDQM 771
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 8/205 (3%)
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ +++L++ +G ++ L K ++ E+ C + R V+ G P + +
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFR-VMSEGACPDVFSFTNVIN 228
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C GK + EL + G+ + + ++ C N ++D A L K+
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAM 414
++ TY L++GL K ++ I D E+ + V+V + L C + + A+
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILD---EMIGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
K D M+ P T ++ GF
Sbjct: 346 KIKDVMISKNITPTSVTLYSLMQGF 370
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
DV ++ +++ L K G+ME A+ +F M++L + + ++ +++ LC L A +
Sbjct: 219 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 278
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
++M G +P+ TY +I+G +
Sbjct: 279 EKMTVKGVQPNLKTYGALINGLI 301
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 189/438 (43%), Gaps = 56/438 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C H L G V + GF P++ N L++ L + I A +
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYI 200
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
+ G P +T +++ LC+ GK + + + V Y+++ID K
Sbjct: 201 MSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLV 260
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D M ++P TY+S++ G
Sbjct: 261 NEAVDLFYHM-RSIGISPTVVTYNSLIYG------------------------------- 288
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ + G+ A ++FK + ++ T ++ AL KEG V EA+ ++ + +
Sbjct: 289 ------MCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQ 342
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y + ++ +CK +E LL +++ R P + S +V C KG E
Sbjct: 343 IAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSE 402
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ +++ ++++GL + +SLM+ YC + Q+D+A + + + DV +Y++L+
Sbjct: 403 AQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIK 462
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL------KELRKAMKNHDEML 421
G K R++EA ++FD M + +S + ++S LC KEL K M +H
Sbjct: 463 GYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSH---- 518
Query: 422 KMGHKPDEATYKQVISGF 439
G PD TY ++SGF
Sbjct: 519 --GCPPDLITYSTLLSGF 534
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 155/373 (41%), Gaps = 43/373 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D L + ++++ MR G P V N+L+ + + + AS L+ M+
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
+ P+ T+S++ LC+ G L + I + V Y+ +I K +
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKE 367
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
+ LNEM + RN+ P T+S +D + + I+ LM+E+ L P
Sbjct: 368 SSTLLNEMLS-RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV------ 420
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
TY + L D C ++ EA +++ ++ +G
Sbjct: 421 ----------TYNS-------------LMDGYC--------LHSQMDEARKVFDIMVNKG 449
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y + CK + +E L ++ +G P ++ + ++ C G+ +
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + G D S+L+ +C + +D+A+AL ++K + + +LL G+
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569
Query: 371 FKDGRMEEAVRIF 383
K G++E+A +F
Sbjct: 570 CKAGKLEDAKELF 582
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L AL + + IY + G++ +N LC H +L + + G
Sbjct: 110 LLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLG 169
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + + + C +G+ E E L ++ +G + + ++ C + AI
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
K+ +L +V +Y +++D L K+ + EAV +F +M+ + + + ++ ++ +
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C+ + ++A EML+ KPD T+ ++
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+V PC + ++ +A+ + V + + G+ + + L+ C
Sbjct: 92 FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCH 151
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY-MKELKVVSSSS 396
+ ++ KI KL + T++ L++GL +GR+ EA+ DY M + +
Sbjct: 152 LHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYT 211
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++V+ LC + + A+ +M+++ +P+ +Y +I
Sbjct: 212 HTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 180/409 (44%), Gaps = 9/409 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M ++G V + N L++ L R N + A + G M + G+ P T++ + LC GK
Sbjct: 114 MDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGK 173
Query: 98 FEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ + L + + + + YN +I+ K G+ A D +M P TY+
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM-EQNGCKPDVVTYN 232
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+I+D + + + M+++ + P F + ++ +G+ A +FK
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY--NCMVHGFCILGQLNEATRLFKEMV 290
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T ++ L KEG V EA ++ ++E+G+ S Y A ++ C +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + ++ +G P + + C + E + LL+ + K L D+ S+LM
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C + +A+ + ++ ++ TY +LLDG K G ++EA+++ M+E K+
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE 470
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ I++ + +L A + ++ G +P TY +I G +
Sbjct: 471 PNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 187/410 (45%), Gaps = 19/410 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P S NAL++ L + +I+ A L+ MVR G PN +++ + LC++G +
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMA 212
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ + +G V+ YN +ID K A + L+EM + R + P TY+ ++
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLD-RGIPPNVFTYNCMVH 271
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + R+ MV + ++P ++ L G A ++F+ ++ +
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTL--TILVDGLCKEGMVSEARLVFETMTEKGV 329
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
E T ++ + + EA +++ ++ +G Y +N CK + +E
Sbjct: 330 EPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKS 389
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL ++ + P + S + C G+ KE + + GLL + S L++ +C
Sbjct: 390 LLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC 449
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
+ +D+A+ L +++ K ++ + +L++G+F G++E A +F + + +
Sbjct: 450 KHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIR 509
Query: 396 SFVIVVSRLCHLKELRKAMKN--HDEMLKM---GHKPDEATYKQVISGFM 440
++ +++ L L++ + + +D KM G P+ +Y +I GF+
Sbjct: 510 TYTVMIKGL-----LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 554
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 153/367 (41%), Gaps = 20/367 (5%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++V++ M G P V N ++D+L + + A M+ G+ PN FT++ +
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVH 271
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAA---FDRLNEMCNGR 142
C G+ L + VM + V +D K+G A F+ + E +
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE----K 327
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMG 199
+ P STY++++DG + ++ +M+ + P + + N + + D
Sbjct: 328 GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEA 387
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K+ AEM K + + T +++ L + GR KEA+ I+ + G+ Y
Sbjct: 388 KSLLAEMYHKALNPDTV-----TYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYS 442
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ CK +E LL+ + E+ P + + + GK + +EL S +
Sbjct: 443 ILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD 502
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ + +++ D+A L K+E + +Y+V++ G ++ A
Sbjct: 503 GIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTA 562
Query: 380 VRIFDYM 386
+R+ D M
Sbjct: 563 IRLIDEM 569
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 26/295 (8%)
Query: 7 GRDSQSDA--LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GRD D L++++D +G+ + V+ M G P +S NAL+D Q +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM 114
A ++ M+R G +P +++++ C+S + + LL D+ YS++M
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410
Query: 115 YNLVIDFYSKKGDFGAAFDRLN---EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
L FG + LN EMC+ L P TYS +LDG ++ + + +++
Sbjct: 411 QGLC--------QFGRPKEALNIFKEMCS-YGLLPNLVTYSILLDGFCKHGHLDEALKLL 461
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
M EKKL P + + +I+ + GK A+ +F + + I T M+K L
Sbjct: 462 KSMQEKKLEPN--IVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
KEG EA ++ + + G Y + + L+ ++V + +
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 574
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 95/217 (43%), Gaps = 1/217 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G L + +K+ + + + + + G+T +N LC+ + + +L + +
Sbjct: 92 GKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFK 151
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P A + + C +GK KE EL + ++ +G + ++++ C
Sbjct: 152 LGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSM 211
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A+ + K+E+ DV TY+ ++D L KD + +A+ M + + + ++ +V
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVH 271
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L +L +A + EM+ PD T ++ G
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P E +F+ S K ++ V L + + G+ + + + L+ C +D A+++
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSSFVIVVSR 403
K+ KL +T++ L++GL +G+++EAV +F+ M E V+S ++ +++
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNT---IING 202
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
LC A+ +M + G KPD TY +I
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 197/444 (44%), Gaps = 25/444 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG L+ +L + LE++ M+ +G P+ + N +L+ L +
Sbjct: 211 EGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHS 270
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVID 120
A ++G + + + P+ T+ + RSG+ E + ++ SGI V + ++ID
Sbjct: 271 AVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLID 330
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G+ A N M N R +P TY+++++G + + E + + M E
Sbjct: 331 ALVKSGNIDEACKFFNGMKNLR-CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCS 389
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I L G+ A +FK D + T M+ L K GR EA
Sbjct: 390 PDAI--AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAW 447
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
Q++H + E+G Y ++VL K Q ++V +++++VE+G C ++
Sbjct: 448 QLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGG-EC------IISRD 500
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSF---CCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
G +E V L S ++LM + N +D+A+ L ++K +
Sbjct: 501 SNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI 560
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKA 413
V TY L+DGL K GR++EAV + M+ E VV+ SS +++ + ++
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS---LMASFYKRDQEEES 617
Query: 414 MKNHDEMLKMGHKPDEATYKQVIS 437
+ DEM++ G D +TY VI+
Sbjct: 618 LSLFDEMVRKGCVADVSTYSLVIN 641
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 194/433 (44%), Gaps = 21/433 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D G + + + R M G P+V ++L+ + Y++++ + L+ MVR
Sbjct: 567 TTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVR 626
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----------GIYSSVMYNLVIDFYSKK 125
G + T+SLV LC+S + L + G Y +++ +LV D +K
Sbjct: 627 KGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD---EK 683
Query: 126 GDFG-AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
DF F+ L E +L P Y+ +++G + + + + ++V M + +LP F
Sbjct: 684 IDFALQIFNELQE----SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ ++ L G+ A +F + +E E ++ L K G++ A+ I+
Sbjct: 740 TYTS--LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++++ Y + ++ L KE + EE + + +G P S + S KG
Sbjct: 798 AMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKG 857
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
EL + + + ++L+ +++ A L ++EK+ D+ TY+
Sbjct: 858 MVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYN 917
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L+DG+ K G ++EA F MKE +V +F ++ L + +L +A + D M +
Sbjct: 918 ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE 977
Query: 424 GHKPDEATYKQVI 436
G+ P TY +I
Sbjct: 978 GYNPSVVTYNVLI 990
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 187/427 (43%), Gaps = 9/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ + H G + +++ +M+ + +P V L+D L + + A L M +
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
G P+ T+S + + + E L L D G + V Y+LVI+ K D
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D M + P Y ++L + EK + + +I + E L+P F+ +
Sbjct: 652 ALDVFGRM-KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY--NI 708
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L + A + ++ I T +L L K GR++EA ++ ++E G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y + ++VL K + + R + ++ +P + S + S +G+ +E
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ KG + SSL++ + +D+A+ L ++++ + ++ TY+ LL GL
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K GR+ A ++ + M+++ V ++ I++ + + + +A M + G PD
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948
Query: 430 ATYKQVI 436
T+ +I
Sbjct: 949 ITFTSLI 955
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 188/438 (42%), Gaps = 35/438 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +++ + G + EV+ M+ P A N L+D L + E +A L+ M
Sbjct: 361 TTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKD 420
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ PN T++++ +L ++G+ +++ L + G V YN +ID K G
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDK 480
Query: 131 AFDRLNEMCN-------GRNLTPGFSTYSSILDGA-RRYEKTEVSDRIVGLMVEKKLLPK 182
+ EM R+ G + ++GA R E + + +G + L+
Sbjct: 481 VLAIIKEMVEKGGECIISRDSNAG---HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537
Query: 183 HFLSGN-DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+G+ D ++ L E++ K C + T ++ L K GR+ EA+
Sbjct: 538 FIHNGHVDEAVKLL---------EVMKKHECIPTVV----TYTTLVDGLGKAGRLDEAVS 584
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + ++G Y + + K Q EE L ++V +G + S + C
Sbjct: 585 LLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLC 644
Query: 302 GKGKWKEVEELLSAVLDKGL--LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
+ ++ + ++G+ LL ++ +L+ + +ID A+ + ++++ D
Sbjct: 645 KSDDVDQALDVFGRMKEEGMEPLLGNY--KTLLSSLVKDEKIDFALQIFNELQESSLVPD 702
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
Y+++++GL K R++EA ++ D MK ++ ++ ++ L L +A
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762
Query: 419 EMLKMGHKPDEATYKQVI 436
+M + GH+PD Y ++
Sbjct: 763 KMTEEGHEPDVVAYTSLM 780
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 168/399 (42%), Gaps = 8/399 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SLV++C L+V+ M+ G P + LL +L + +I A ++ +
Sbjct: 637 SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE 696
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
+ P+ F ++++ L +S + + L+DS +++ Y ++D K G
Sbjct: 697 SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE 756
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF+ +M P Y+S++D + K + I M +K+ +P +
Sbjct: 757 AFNMFTKMTE-EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPD--VVTYSS 813
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ A F+ + + ++ + K+G V A++++ + R
Sbjct: 814 LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y ++ L K + LL ++ + G +P + + + G E E
Sbjct: 874 CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ +KG++ D +SL+E ++ +A L +E+ + V TY+VL+D L
Sbjct: 934 SYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDIL 993
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKE 409
+ G++ EA IF MK + + ++ R+ ++E
Sbjct: 994 GRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVRE 1032
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 14/337 (4%)
Query: 109 IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
I + V Y ++D K G A L EM + P TYSS++ + ++ E S
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREM-EKQGCEPSVVTYSSLMASFYKRDQEEESL 618
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+ MV K + +S VI L A +F R +E +E +L
Sbjct: 619 SLFDEMVRKGCVAD--VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLS 676
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+L K+ ++ A+QI++ + E + Y VN L K ++ +E C L+ + + +P
Sbjct: 677 SLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILP 736
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + G+ +E + + + ++G D +SLM+ ++ A+ +
Sbjct: 737 DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF 796
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY------MKELKVVSSSSFVIVVS 402
+ K + DV TY L+D L K+GR+EEA F+ + V SS ++
Sbjct: 797 RAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS-----LID 851
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A++ +EM + P+ TY ++SG
Sbjct: 852 SFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/456 (20%), Positives = 186/456 (40%), Gaps = 59/456 (12%)
Query: 20 DCYSHKGLFMDGLEVYRMM--RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
D YSH + Y +M R+ G A +L A++++ R++ L +++R
Sbjct: 176 DGYSHT------VGTYTLMIKRLAG-AQETDAVVQILTAMWKEGH-RISMHLLTSLLRTF 227
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
S N SG E+ + G S MYN V++ K G + +A
Sbjct: 228 GSTNNV-----------SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFG 276
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYVIQKL 195
++ R + P T+ + R + + + + M++ + P H + +I L
Sbjct: 277 KLGQFR-IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFT---VLIDAL 332
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G A F + + T ++ L+K GR++EA +++ + E +
Sbjct: 333 VKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDA 392
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y ++ L K + + CGL +++ +RG +P + ++ G+ E +L
Sbjct: 393 IAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHD 452
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG------------------- 356
+ ++G + D F ++L++ Q+DK +A+ ++ + G
Sbjct: 453 LKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGA 512
Query: 357 ------------SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
SL TY+ L+ +G ++EAV++ + MK+ + + + ++ +V
Sbjct: 513 DRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDG 572
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L L +A+ EM K G +P TY +++ F
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 118/283 (41%), Gaps = 33/283 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + A + ++D G L ++R M VP V ++L+D+L ++ +
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEE 826
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + + G +PN G+YSS +ID + KK
Sbjct: 827 AYYFFENSISKGCTPN-------------------------VGVYSS-----LIDSFGKK 856
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A + EM R P TY+++L G + + V+++++ M + +P L
Sbjct: 857 GMVDRALELFEEM-QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPD--L 913
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I + MG AE FKR ++ I T ++++L K ++ EA +++
Sbjct: 914 VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDS 973
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ E G Y +++L + + E + ++ +G +P
Sbjct: 974 MEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 187/409 (45%), Gaps = 11/409 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G VP V + + ++D + ++ L + R G+ PN++T++ + LC++G+
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337
Query: 98 F----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+V+ + + I+ +V+Y +I + K G+ + +EM + + P F TY+
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM-KRKKIVPDFVTYT 396
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++ G + K + ++ M+ K L P +I G+ A + +
Sbjct: 397 SMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY--TALIDGYCKAGEMKEAFSLHNQMV 454
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ + T ++ L K G V A ++ H +SE+G+ Y A +N LCK E
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIE 514
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ L+ ++ G+ P + + + + C G+ + ELL +LDKGL + LM
Sbjct: 515 QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLM 574
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+C + ++ L IK KG + + T++ L+ M + I+ M V
Sbjct: 575 NGFCMSGMLEDGERL-IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGV 633
Query: 392 VS-SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++++ I++ C + +++A H EM++ G A+Y +I GF
Sbjct: 634 VPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 209/470 (44%), Gaps = 47/470 (10%)
Query: 14 ALSLVLDCYSH----KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ-NEIRLASC 68
A LV D + GL ++ +++ + YG + +V +CN L L + IR A
Sbjct: 179 AHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFR 238
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYS 123
++ GV N +++++ +LC+ GK + LL + V Y++++D Y
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+ G + E+ + L P TY+SI+ + + +++++ +M +++ P +
Sbjct: 299 QVEQLGKVLKLMEEL-QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDN 357
Query: 184 FL----------SGN------------------DYV-----IQKLSDMGKTYAAEMIFKR 210
+ SGN D+V I L GK A +F
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ ++ + T ++ K G +KEA +++ + E+G+T Y A V+ LCK +
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LL ++ E+G P + + C G ++ +L+ + G D+ ++
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+M+ YC ++ KA L ++I KG + T++VL++G G +E+ R+ +M +
Sbjct: 538 IMDAYCKMGEMAKAHEL-LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596
Query: 390 KVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ ++++F ++ + C +R ++ + M G PD TY +I G
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 171/367 (46%), Gaps = 8/367 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G ++ +V R+M+ P L+ + + + L+ M R + P+ T+
Sbjct: 336 GRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTY 395
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC++GK ++ +L G+ V Y +ID Y K G+ AF N+M
Sbjct: 396 TSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVE 455
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ LTP TY++++DG + + ++++ ++ M EK L P + + +I L +G
Sbjct: 456 -KGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN--VCTYNALINGLCKVGN 512
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A + + T ++ A K G + +A ++ ++ ++G+ +
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N C E+ L++ ++++G +P A + + C + + E+ + +G
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
++ D+ + L++ +C R + +A LH ++ + SL A+Y+ L+ G +K + EEA
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 381 RIFDYMK 387
++F+ M+
Sbjct: 693 KLFEEMR 699
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 140/312 (44%), Gaps = 8/312 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y G + ++ M G P V AL+D L + E+ +A+ L M
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGA 130
G+ PN T++ + LC+ G E + L++ +G + ++ Y ++D Y K G+
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L M + + L P T++ +++G E +R++ M++K ++P + +
Sbjct: 551 AHELLRIMLD-KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN--ATTFNS 607
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++++ A I+K + + +T ++K K +KEA ++ + E+G
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
++ + Y + + K + EE L ++ G+I FV +G W+
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTL 727
Query: 311 ELLSAVLDKGLL 322
EL ++K L+
Sbjct: 728 ELCDEAIEKCLV 739
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE-GRVKEAIQIYHLIS 247
D Q L + G A +F + + + + D+C L LS ++ A +++ S
Sbjct: 185 DVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYS 244
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E G+ Y +++LC+ + +E LL + RG +P + S V C +
Sbjct: 245 EVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLG 304
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+V +L+ + KGL + + +S++ + C ++ +A + ++ + D Y L+
Sbjct: 305 KVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLI 364
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G K G + ++FD MK K+V ++ ++ LC ++ +A K EML G K
Sbjct: 365 SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLK 424
Query: 427 PDEATYKQVISGF 439
PDE TY +I G+
Sbjct: 425 PDEVTYTALIDGY 437
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 132/302 (43%), Gaps = 8/302 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G ++ +++ M G P AL+D + E++ A L+ MV G++PN T+
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465
Query: 86 SLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC+ G+ ++ LL + G+ +V YN +I+ K G+ A + EM +
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM-D 524
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
P TY++I+D + + + ++ +M++K L P + + ++ G
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT--IVTFNVLMNGFCMSGM 582
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
E + K D+ I T ++K ++ I+IY + +G+ + Y
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNI 642
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ CK +E L +++VE+G+ A + + + K++E +L + G
Sbjct: 643 LIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Query: 321 LL 322
+
Sbjct: 703 FI 704
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 189/422 (44%), Gaps = 15/422 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+G D V R G V A N L+ R + A L +M V P+ +
Sbjct: 82 RRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAY 138
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + + LC G+ L LLD + S V Y ++++ K FG A L+EM
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ TP TY+ I++G R ++ + + +I+ + P V++ L
Sbjct: 199 -RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV--SYTTVLKGLCAA 255
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ E++F + + T +++ + G V+ AI++ +SE G T +
Sbjct: 256 KRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLC 315
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N +CK+ + ++ L ++ G P + + + C G+W++ +ELL+ ++
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR 375
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
K + ++ + C ID+AI L ++ + S+ + TY+ L++G GR++
Sbjct: 376 KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDS 435
Query: 379 AVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ +F+ + E + ++ +++ LCH + L A + EM++ + T+ ++S
Sbjct: 436 ALELFNSLPCEPNTI---TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVS 492
Query: 438 GF 439
F
Sbjct: 493 FF 494
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 188/416 (45%), Gaps = 12/416 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++ + YGF P + +L L L+ MV + PN+ T+ ++
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284
Query: 90 QILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ CR G E + +LD ++ + N+VI+ K+G AF+ LN M
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM-GSYGC 343
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P +Y+++L G R + E + ++ MV K P + ++ N ++ L G A
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNC-PPNEVTFNTFIC-ILCQKGLIDQA 401
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ ++ + + T ++ +GRV A+++++ + T+ Y +
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTI---TYTTLLTG 458
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + + LL ++++ + + V+ C KG +E EL+ +++ G +
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L++ + ++A+ L + SLD TY ++D L ++ R+EEAV++F
Sbjct: 519 LITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFH 578
Query: 385 YMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++++ + + + ++S LC E +A+ M+ P+E+TY +I G
Sbjct: 579 AVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 162/400 (40%), Gaps = 58/400 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++V++ +G D E M YG P + +L L R A
Sbjct: 307 GCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDA 366
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--------GIYSSVMYNLV 118
L MVR PN+ T++ ILC+ G + + L++ GI V YN +
Sbjct: 367 KELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGI---VTYNAL 423
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
++ + +G +A + N + P TY+++L G E+ + + ++ M++
Sbjct: 424 VNGFCVQGRVDSALELFNSL----PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQND 479
Query: 179 LLPKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
P + ++ N + QK + + + C + T +L ++++
Sbjct: 480 -CPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNL----ITFNTLLDGITEDCN 534
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+EA+++ H + +GI++ Y + V+VL +E + EE + V + G P A+ ++
Sbjct: 535 SEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNK 594
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+++ C + + D+AI +
Sbjct: 595 ILSALCKRC-----------------------------------ETDRAIDFFAHMVSNS 619
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ +TY +L++GL ++G ++EA + + V+S S
Sbjct: 620 CMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKS 659
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + L R +A + E L+ +G D + C+ L+ C + A +
Sbjct: 37 PASSRLRRLIA----RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARV 92
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHL 407
E +DV Y+ L+ G + GR++ A R+ M + ++ ++ LC
Sbjct: 93 LRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPP--DAYTYTPLIRGLCDR 150
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ A+ D+ML+ +P TY ++
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 193/439 (43%), Gaps = 44/439 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + S +++ + +G + + + M + P V N L++ L + + A
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDF 121
L MV+ G N+ T+ V +C+SG + L L + I +SV+ Y++VID
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS 253
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G+ A NEM + + YSSI+ G + + +++ M+ + ++P
Sbjct: 254 LCKDGNLDDALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
T++A ++ KEG++ EA +
Sbjct: 313 NVV----------------TFSA---------------------LIDVFVKEGKLLEAKE 335
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+Y+ + RGI Y + ++ CKE++ E +L +V +G P + S + S C
Sbjct: 336 LYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYC 395
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ L + KGL+ D+ ++L++ +C + +++ A L ++ V
Sbjct: 396 KAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
TY +LLDGL +G +++A+ IF+ M++ + ++ + I++ +C+ ++ A +
Sbjct: 456 TYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSL 515
Query: 421 LKMGHKPDEATYKQVISGF 439
G KPD TY +I G
Sbjct: 516 SVKGVKPDVLTYNVMIGGL 534
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 173/388 (44%), Gaps = 31/388 (7%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL---LDSGIYSSVMY--NLVIDFYS 123
L+ +M++ P+ +S + + R ++++VLG +D MY N++I+ +
Sbjct: 56 LFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFC 115
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFS----TYSSILDG----ARRYEKTEVSDRIVGLMV 175
+K AF + GR L GF T+S++++G R E + DR MV
Sbjct: 116 RKRKLLFAFSVV-----GRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDR----MV 166
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E K P + + +I L G+ A ++ R E + T G +L + K G
Sbjct: 167 EMKYRPN--VVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ ++ + ER I Y ++ LCK+ ++ L ++ +G + S
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G+W + ++L ++ + ++ + S+L++ + ++ +A L+ ++
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARG 344
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELR 411
+ D TY L+DG K+ R+ EA ++ D M E +V+ S I+++ C K +
Sbjct: 345 IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYS---ILINSYCKAKRVD 401
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ E+ G D TY ++ GF
Sbjct: 402 NGMRLFCEISSKGLVADTVTYNTLVQGF 429
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 123/312 (39%), Gaps = 8/312 (2%)
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGN 188
A D M R L P +S + ARR E D ++G E L +H +
Sbjct: 53 AIDLFESMIQSRPL-PSLIDFSKLFSAVARRKE----YDLVLGFCKEMDLNGIEHNMYTM 107
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I K A + RA E T ++ EGRV EA+ + + E
Sbjct: 108 NIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE 167
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+N LC + + E L+ +V+ G + + C G
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L + ++ + S +++ C + +D A++L ++E DV Y ++
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL DGR ++ ++ M ++ + +F ++ +L +A + ++EM+ G P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347
Query: 428 DEATYKQVISGF 439
D TY +I GF
Sbjct: 348 DTITYSSLIDGF 359
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ +N C E + E L+ +VE Y P + ++ + C KG+ E L+ ++
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G + ++ C + A+ L K+E+ V Y +++D L KDG ++
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261
Query: 378 EAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A+ +F+ M E+K + + ++ ++ LC+ K EM+ P+ T+ +
Sbjct: 262 DALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSAL 320
Query: 436 ISGFM 440
I F+
Sbjct: 321 IDVFV 325
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 94/241 (39%), Gaps = 36/241 (14%)
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+V EAI ++ + + D+ + + + + + V G +++ G ++
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C K K ++ L G ++ S+L+ +C ++ +A+AL ++ ++
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM---------------------------- 386
K +V T + L++GL GR+ EA+ + D M
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228
Query: 387 ------KELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
E + + +S + IV+ LC L A+ +EM G K D Y +I G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288
Query: 439 F 439
Sbjct: 289 L 289
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 177/380 (46%), Gaps = 10/380 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L++V++ +G ++ + V G P N +++A +Q + + M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDF 128
+DGV NK T++L+ ++ ++GK L D GI S V +Y +I + +KG+
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF +E+ + L+P TY +++DG + + ++ ++ M K + +
Sbjct: 346 KRAFLLFDELTE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF-- 402
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I G A MI+ + + TC + ++ R EA Q + E
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ + Y ++V CKE EE L ++ +G P A+ + + + C +GK KE
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLL 367
+L + + G+ DS+ +SL+ C +D+A+ L ++ LKG + TY V++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMI 581
Query: 368 DGLFKDGRMEEAVRIFDYMK 387
GL K G+ +EA ++D MK
Sbjct: 582 SGLSKAGKSDEAFGLYDEMK 601
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
IF+R D +++ + +++ L + G V+++ ++ S +GI Y +N
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K+ V G+L+ + + G + + + + GK + E+L + ++G+ D
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+SL+ + C + +A L ++ + S TY L+DG+ K G M A + + M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 387 KELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V ++ F ++ C + +A +D M + G + D T + S F
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 107/253 (42%), Gaps = 3/253 (1%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D V + D G +F + + + + +C L A K R+ ++I+ + +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ + V LC+ + E+ L+++ +G P A + + + + +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
VE +L + G++ + + LME N ++ A L ++ + DV Y L+
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+ G M+ A +FD + E K +S SS+ ++ +C + E+ A +EM G
Sbjct: 338 WNCRKGNMKRAFLLFDELTE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 427 PDEATYKQVISGF 439
+ + +I G+
Sbjct: 397 ITQVVFNTLIDGY 409
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 199/430 (46%), Gaps = 21/430 (4%)
Query: 25 KGLFM-----DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KG++M D ++++ M G + L++ L + + LA L+ M +
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCK 1082
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ FT+ ++ LC+ G L + I + ++ ++V+ YS D F RL E
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV--YSSLMDGLCRFGRLKEAL 1140
Query: 140 N------GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
GR ++ TY+S++ G R + + LMV++ P F +I
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF--TILID 1198
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
L GK A+ I + + E T ++ L G++++A +++ +++RGI +
Sbjct: 1199 GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N CK+ + +E ++ +G P + + + + C G+ + ++L
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 1318
Query: 314 SAVLDKG--LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ G L L ++C L++ C N +++A+ L I+K + ++ + +LLDG+
Sbjct: 1319 VEMQTCGQFLKLSTYCV--LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMC 1376
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ G++EEA + FD + + + + ++ I+++ LC+ L +A+K +M + G PD
Sbjct: 1377 RAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 1436
Query: 431 TYKQVISGFM 440
T+ +I +
Sbjct: 1437 TFNVIIQNLL 1446
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 175/377 (46%), Gaps = 10/377 (2%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++D G+ + L+++ M G +P V ++L+D L R ++ A + M
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAA 131
G+S + +T++ + L R+G ++ V L D G + + ++ID K+G G A
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
++ E+ + P TY+++++G + E + ++ + ++ + K + + +
Sbjct: 1210 -QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI--KLNVFSYNIL 1266
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I K A F+ + ++ T ++ AL + GRV+ A +++ + G
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
++ S Y ++ LCK EE L + + + + P S + C GK +E +
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGL 370
+ GL D+ + L+ C+ + +A+ L ++E+ KG L D T++V++ L
Sbjct: 1387 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE-KGCLPDSITFNVIIQNL 1445
Query: 371 FKDGRMEEAVRIFDYMK 387
K+ + EA+++ + M+
Sbjct: 1446 LKENEIHEAIQLLEEMR 1462
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 153/366 (41%), Gaps = 26/366 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D G + LE ++ M G V N+L+ L R + + MV
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGA 130
G SP+ FT++++ LC+ GK +L+ G ++ YN +++ G
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +L E R + +Y+ +++G + +K + + R M K L P +
Sbjct: 1244 A-TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTY--NT 1300
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK---------ALSKEGRVKEAIQ 241
+I L G+ A+ +F +E+Q TCG LK L K G ++EA+
Sbjct: 1301 LIGALCQSGRVRTAQKLF-------VEMQ--TCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ I + + ++ +C+ + EE ++ + G P + + + C
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 1411
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
KG E +LL + +KG L DS + +++ +I +AI L ++ S D A
Sbjct: 1412 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 1471
Query: 362 TYDVLL 367
+LL
Sbjct: 1472 VTSMLL 1477
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 155/365 (42%), Gaps = 15/365 (4%)
Query: 6 EGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
EGR +D + ++ S GL+ + +M GF P L+D L ++ ++
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 1206
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLV 118
A + M G P+ T++ + LC G+ E + L D GI +V YN++
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I+ Y K AF EM + L P TY++++ + + + + L VE +
Sbjct: 1267 INGYCKDQKIDEAFRFFEEM-RPKGLKPSTVTYNTLIGALCQSGRVRTAQK---LFVEMQ 1322
Query: 179 LLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
FL + Y ++ L G A +F+ + + + +L + + G++
Sbjct: 1323 TC-GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKL 1381
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+EA + + IS+ G+ Y +N LC + E LL + E+G +P ++ +
Sbjct: 1382 EEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA-IALHIKIEKLK 355
+ + + + E +LL + ++ D S L+ + Q A ++L ++K
Sbjct: 1442 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501
Query: 356 GSLDV 360
GS+ V
Sbjct: 1502 GSVPV 1506
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 201/471 (42%), Gaps = 42/471 (8%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L++ Y +G+ +E + ++ + GF P+V CN +L ++ + L
Sbjct: 160 NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 219
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYS 123
L+ M G+ PN T++++ LC G + LL + + + V YN ++++Y
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279
Query: 124 KKGDFGAAFDRLNEM-CNG---------------------------------RNLTPGFS 149
KKG + AA + ++ M C G ++P
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY+++++G + K V+ ++ M + L P + +I +G A +
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN--CVTYNALIGGHCHVGDFEEALRLLD 397
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ L + T G +L L K + + A ++ + + V Y ++ LCK
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+E L+ ++ + G P + S + C G K +E++ + GL+L+ S
Sbjct: 458 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 517
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ +C + + +A+ ++ + D T +VL+ L +DG++ EA + +M +
Sbjct: 518 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 577
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V +S ++ +++ + + A D+M+K G P TY ++ G
Sbjct: 578 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 179/451 (39%), Gaps = 20/451 (4%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ +C G + ++++ G + + M G VP + +++
Sbjct: 538 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 597
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYN 116
+ A + M++ G P+ FT+ + + LC+ G L+ G SVMYN
Sbjct: 598 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 657
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL-MV 175
++ K G+ A ++M N+ P TYSS+L G R K + + G M
Sbjct: 658 TLLAETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAA-----EMIFKRACDEKIELQDDTCGCMLKAL 230
L P H + ++ LS G AA EM+ K C + + ++ +
Sbjct: 717 RGTLFPNHVMY--TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN-----AIIDSC 769
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S+ G++ +A + + G+ + Y ++ K+ L ++ G P
Sbjct: 770 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 829
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + G +LL ++ +G L D F + L+ Y + ++ KA L
Sbjct: 830 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 889
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
+ L D TY+ + +GL K E+ + M E V+ + ++ +++ +C + +
Sbjct: 890 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ A K DEM +G E ++ G +
Sbjct: 950 IQGAFKLKDEMEALGFGSHEVAESAMVRGLL 980
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 165/427 (38%), Gaps = 40/427 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ Y KG + +E+ M G V N +D L + A L M ++
Sbjct: 274 LLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM 333
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAF 132
+SPN+ T++ + + GK V + + + V YN +I + GDF A
Sbjct: 334 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 393
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-------- 184
L+ M L TY ++L+G ++EK E++ R++ M ++ H
Sbjct: 394 RLLDHM-EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 452
Query: 185 ------------LSGNDY-------------VIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
L GN Y +I +G +A+ I R + L
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ + G V EA+++Y +++ G V+ LC++ + E L
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ G +P ++ + G ++ G F SL++ C
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 632
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ +A ++ + G++D Y+ LL K G + EAV +FD M + V+ S ++
Sbjct: 633 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 692
Query: 399 IVVSRLC 405
+++ LC
Sbjct: 693 SLLTGLC 699
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 175/427 (40%), Gaps = 17/427 (3%)
Query: 25 KGLFMDG--LEVYRMMRVYGFVP-AVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL G +E + + ++P AV + N LL + + A L+ MV++ V
Sbjct: 626 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 685
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGI------YSSVMYNLVIDFYSKKGDFGAAFD 133
P+ +T+S + LCR GK + L + + + VMY ++D SK G AAF
Sbjct: 686 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 745
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
EM + P +++I+D R + ++ M + P L+ + ++
Sbjct: 746 FFEEMMK-KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN--LATYNILLH 802
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S ++ E I T ++ LSK G +++ + G
Sbjct: 803 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 862
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ +N + + + L+ + G P + K ++E +L
Sbjct: 863 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 922
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK-GSLDVATYDVLLDGLFK 372
+L+ G++ +L+ C I A L ++E L GS +VA ++ GL
Sbjct: 923 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE-SAMVRGLLH 981
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G+ E+A+ + D+M ++++ + ++F ++ R C ++ +A+K M G K D
Sbjct: 982 CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVA 1041
Query: 432 YKQVISG 438
Y +I G
Sbjct: 1042 YNVLIMG 1048
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 163/402 (40%), Gaps = 40/402 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG-AMVRDGVSPNKFT 84
G + + ++ M +P ++LL L R+ + A CL+G AM R + PN
Sbjct: 667 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 726
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + L ++G + + + +V +N +ID S++G A D + M
Sbjct: 727 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM- 785
Query: 140 NGRNLTPGFSTYSSILDGAR------RY--------------EKTEVSDRIVGLM----- 174
+ P +TY+ +L G RY +K I+GL
Sbjct: 786 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845
Query: 175 -VEKKLLPKHFLSGN-------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ KLL K + G + +I K S+ GK A + + DT +
Sbjct: 846 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L+K+ +E+ + H + E G+ + + Y +N +C+ + L ++ G+
Sbjct: 906 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+ S V GK ++ +L +L LL ++LM +C + +I +A+
Sbjct: 966 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L +E LDV Y+VL+ G+ +G A +++ M+
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1067
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++ KEG + A++ + L+ G + + K+ + E V L R++ ++G
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 228
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C +G K+ LL + + G + ++L+ +YC + AI
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 346 ALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
L I KG DV TY+V +D L + R +A +
Sbjct: 289 EL-IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL---------------------- 325
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LK++RK M + P+E TY +I+GF+
Sbjct: 326 --LKKMRKEMIS----------PNEVTYNTLINGFV 349
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 177/398 (44%), Gaps = 19/398 (4%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG 108
L+D L + ++ A L+ ++ GV+P+ ++ + LC + F E+ + G
Sbjct: 16 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75
Query: 109 IYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
S V YN++ID K+G A D + +M ++ P TY++++DG + + E +
Sbjct: 76 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSSRVEEA 134
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ M P ++ +I L K A +F + I + G ++
Sbjct: 135 LLLFNEMERLGCTPNR--RSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L+K G++ EA +++ + + GIT Y ++ +C + +E L + + +G
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + C +GK E LL + D G + D S+L+ CS ++D A L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------SFVIVV 401
+ K + V T + L+ GL K GR++EA + D M VSS ++ +V
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM-----VSSGQSPDVVTYNTLV 367
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + +A + +M+ G P+ TY ++SG
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 173/411 (42%), Gaps = 9/411 (2%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F D E++ M G P+ N ++DA ++ + A L M+ DG P+ T++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 88 VAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
V LC+S + E L L + + +N +I ++ A +EM +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EAK 179
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
++ P +Y ++DG + K + ++ M++ + P + VI +
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTY--NVVIHGMCLAYTLD 237
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +FK + T ++ A K G++ EA ++ +++ G Y +
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LC + ++ LL D+V+R P + + + C G+ KE E+L A++ G
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D ++L+ +C Q ++A L + + +V TY L+ GL K R+ EA +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
F MK + ++ ++ C ++ +K EM+ G PD Y
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 179/434 (41%), Gaps = 19/434 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V+D + L ++ M G P + N ++ L +Q++I A ++ M
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAF 132
+ P+ +++ ++ L ++GK +++ +LDSGI S+V YN+VI A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ M + P T++ ++D + K + + R++ M + +P + +I
Sbjct: 241 ELFKSM-RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD--VVTYSTLI 297
Query: 193 QKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
L + + A E + KR C + Q+ ++ L K GR+KEA ++ +
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT----LIHGLCKAGRIKEAREVLDAMVS 353
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G + Y V+ C+ Q E LL D+V RG P + + V+ C + E
Sbjct: 354 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 413
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ + + G + F ++L+ +CS Q+D + L ++ S D Y L
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473
Query: 369 GLFKDGRMEEAVRIFDYMKE---LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L K GR A+ I +E + + V L ++ A+ +M++ G
Sbjct: 474 ELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ 533
Query: 426 KPDEATYKQVISGF 439
P +++G
Sbjct: 534 LPAPERCASLVAGL 547
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G ++ L+K G++ +A ++ + G+T Y + ++ LC + ++ L D+
Sbjct: 14 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
RG P + + + + C +G +E +L+ +++ G + D +++M+ C + ++++
Sbjct: 74 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 133
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A+ L ++E+L + + +++ ++ GL + ++++A ++F M+ + S S+ I++
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILID 193
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +L +A K ML G P TY VI G
Sbjct: 194 GLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 121/298 (40%), Gaps = 38/298 (12%)
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
N RN++P +Y ++DG L+ G
Sbjct: 2 NERNVSPDSWSYGILIDG-------------------------------------LAKAG 24
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A +F++ + ++ L +A +++ ++ RG Y
Sbjct: 25 KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 84
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ CK EE C L++ ++E G++P + + + C + +E L + +
Sbjct: 85 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G + ++++ C +ID+A + ++E D +Y +L+DGL K G++ EA
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++F M + + S+ ++ +V+ +C L +A++ M G +P T+ +I
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 10/311 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++D + +G + + + M G VP V + L+ L + A L MV
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFG 129
+ P T + + LC++G+ + +LD+ + S V YN ++ + + G
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + L++M R L P TY++++ G + + + + M P F
Sbjct: 378 RARELLSDMV-ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY--T 434
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE- 248
+I G+ +F I G + L K GR A++I E
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494
Query: 249 -RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
R D Y V+ L + + E G +RD+V G +P + VA C G+
Sbjct: 495 LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 554
Query: 308 EVEELLSAVLD 318
E +L ++D
Sbjct: 555 EARAVLEEIMD 565
>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
Length = 485
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 189/464 (40%), Gaps = 75/464 (16%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++ Y G+ LE +R +P V ACN LL L R N I +Y M
Sbjct: 42 FDMLVKAYVKVGMVEKALETFRRNIETRLIPNVIACNCLLSGLSRFNYITQCWEVYAEMG 101
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFG 129
R GV N +T++++ +L + G + V G L+ G V YN +++ Y KK
Sbjct: 102 RLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLE 161
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF L ++ R + P TY+++++G K + + ++ MV + + P +S N
Sbjct: 162 DAF-YLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAHQLFHQMVHRGIAPD-IVSYNT 219
Query: 190 ----YVIQKLSDMGKTYAAEMIFKRACDEKI----------------------------- 216
Y M ++ EMI R C + I
Sbjct: 220 LVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGYARDGKLLSALNTVEELKRFR 279
Query: 217 -ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
++ ++ ++ AL KEG+ A H ISE G T + + Y V LC+ + EE
Sbjct: 280 MKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEAL 339
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L D+ + A + C + E E LL ++ +L D +L++ Y
Sbjct: 340 ILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGY 399
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C ++DKA++L +++F KE +V +
Sbjct: 400 CEENKVDKAVSL--------------------------------LKLF--AKEFQVYDTE 425
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ VV C + + + M+ D++LK+G+ P++ T + VI G
Sbjct: 426 SYNAVVKVFCDVGNVTELMEVEDKLLKVGYVPNKLTCRHVIHGL 469
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 143/346 (41%), Gaps = 12/346 (3%)
Query: 96 GKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
G +E ++ + ++ V++++++ Y K G A + R L P + +L
Sbjct: 23 GIYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEKALETFRRNIETR-LIPNVIACNCLL 81
Query: 156 DGARRYEKT----EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
G R+ EV + L V++ + ++ LS G T ++
Sbjct: 82 SGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMT------HVLSKDGDTDKVTGFLEKM 135
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+E E T ++ + K+ R+++A +Y ++ RG+ Y +N LC+E +
Sbjct: 136 EEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKV 195
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+E L +V RG P + + V C G+ + +L ++ + DS C +
Sbjct: 196 KEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVI 255
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ Y + ++ A+ ++++ + + YD L+ L K+G+ A + E
Sbjct: 256 VDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGY 315
Query: 392 VSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ +V LC +A+ +M K + A Y+ VI
Sbjct: 316 TPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVI 361
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 193/443 (43%), Gaps = 15/443 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + L+++++C+ G V G P + L++ L + + A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDF 121
L+ MV G P+ +T++ + LC+ G+ + GL ++G + V Y+ +I
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K A D + M ++++P TY+S++ G + + + + ++ M ++P
Sbjct: 125 LCKYRRVNEALDIFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + ++ GK AAE + K + +E T ++ S V EA +
Sbjct: 184 N--VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ ++ +G Y +N CK + +E L +++ +G P + + + C
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ +E ++L + G L + + + L++ +C + KA L ++ ++
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS----FVIVVSRLCHLKELRKAMKNH 417
Y++L++ + K G +++A +F EL V+ + +++ LC L +A++
Sbjct: 362 MYNILVNAMCKSGNLKDARELFS---ELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
M G PDE +Y +I GF+
Sbjct: 419 RNMEDDGCPPDEFSYNVIIRGFL 441
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 153/370 (41%), Gaps = 14/370 (3%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+++ M G V + L+ +L + + A ++ M +SP FT++ + Q LC
Sbjct: 102 LFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLC 161
Query: 94 RSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+++ LL+ ++M +N+++D + K+G AA L M + P
Sbjct: 162 NFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTE-MGVEPDV 220
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQKLSDMGKTYAAE 205
TY+S++ G + + + ++ +M+ K P F + N Y K D K E
Sbjct: 221 VTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNE 280
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
MI + + + ++ L + GR++EA ++ + G Y ++
Sbjct: 281 MIHQGSTPNNVSYNT-----LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + L R + P + + V + C G K+ EL S + GL +
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNV 395
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++++ C +D+A+ +E D +Y+V++ G + AV +
Sbjct: 396 QIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGE 455
Query: 386 MKELKVVSSS 395
M++ ++ +
Sbjct: 456 MRDRGFITDA 465
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 8/279 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + +G + V + M G P V N+L+ E+ A L+ M
Sbjct: 187 TFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVM 246
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
+ G P+ F++S++ C++ + + L + I+ ++V YN +I + G
Sbjct: 247 ITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL 306
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D M NL P TY+ +LDG + + R+ M L P L
Sbjct: 307 REAQDLFKNMHTNGNL-PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN--LVMY 363
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ + G A +F ++ ++ L KEG + EA++ + + +
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
G + Y + + L+ ++ +RG+I
Sbjct: 424 DGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 185/428 (43%), Gaps = 9/428 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++++C+ GL V + G+ P N + + +I A + +V
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYS--SVMYNLVIDFYSKKGDFG 129
G ++ ++ + LC+ G+ L LL D + VMY+ +ID K +
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AFD +EM + R ++ TYS+++ G K + + + M + + P + +
Sbjct: 228 DAFDLYSEMVS-RRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF--N 284
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ G+ A+ + I+ T ++ V A I + +S R
Sbjct: 285 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+T Y +N CK ++ L +++ + P + + + C G+
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL+ + D+G D SS+++ C N +DKAIAL IK++ ++ TY +L+DG
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
Query: 370 LFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K GR+E+A IF D + + ++ +++ +++ C +A+ +M PD
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524
Query: 429 EATYKQVI 436
TY+ +I
Sbjct: 525 AITYEIII 532
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 154/341 (45%), Gaps = 8/341 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
+ ++D++ + + A LY MV +S N T+S + C GK + +GL +
Sbjct: 214 STIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
++ +N+++D + K+G A + L M + + P TY+S++DG +
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK-QGIKPDIVTYNSLMDGYCLVNEVN 332
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ I+ M + + + + VI + A +FK ++I T
Sbjct: 333 MAKSILNTMSHRGVTAT--VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNS 390
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L K GR+ A+++ L+ +RG Y + ++ LCK H ++ LL + ++G
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C G+ ++ + +L KG L + +++ +CS+ D+A+
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+L K++ D TY++++ LF ++A ++ M
Sbjct: 511 SLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 153/394 (38%), Gaps = 52/394 (13%)
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY----- 110
+ N++ A L+ ++R +P + + L +S + VL L Y
Sbjct: 44 TFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKP 103
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEV 166
+ V +N++I+ + + G AF L ++ P T ++ + G + ++
Sbjct: 104 NFVNFNILINCFCQLGLIPFAFSVLAKILK-MGYEPDTITLNTFIKGFCLKGQIHQALNF 162
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
D++V L + L I L +G+T AA + +R + ++L +
Sbjct: 163 HDKLVALGFHLDQVSYGTL------INGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI 216
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ ++ K+ V +A +Y + R I+ Y A ++ C + ++ GL +
Sbjct: 217 IDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + V + C +G+ KE + L+ ++ +G+
Sbjct: 277 NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI------------------------- 311
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
D+ TY+ L+DG + A I + M V ++ S+ IV++ C
Sbjct: 312 ----------KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFC 361
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+K + +AMK EM P+ TY +I G
Sbjct: 362 KIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 160/404 (39%), Gaps = 59/404 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + +G + MM G P + N+L+D NE+ +A + M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
GV+ ++++V C+ + + L I+ +V+ YN +ID K G
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK---LLPKHFL 185
A + ++ M + R P TYSSILD K + D+ + L+++ K + P +
Sbjct: 402 SYALELIDLM-HDRGQQPDIITYSSILDALC---KNHLVDKAIALLIKLKDQGIRPNMYT 457
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I L G+ A IF+ + L +T M++ G EA+ +
Sbjct: 458 Y--TILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS------ 299
+ + Y + L + + ++ LLR+++ RG + +E + S
Sbjct: 516 MKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPA 575
Query: 300 --------QCG----KGKW---------------------KEVE---ELLSAVLD---KG 320
QC G W K+VE ++ + D +G
Sbjct: 576 HFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQG 635
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+LD + +++ +CS+ D+++AL K+E D TYD
Sbjct: 636 YILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 201/471 (42%), Gaps = 42/471 (8%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L++ Y +G+ +E + ++ + GF P+V CN +L ++ + L
Sbjct: 911 NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 970
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYS 123
L+ M G+ PN T++++ LC G + LL + + + V YN ++++Y
Sbjct: 971 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 1030
Query: 124 KKGDFGAAFDRLNEM-CNG---------------------------------RNLTPGFS 149
KKG + AA + ++ M C G ++P
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY+++++G + K V+ ++ M + L P + +I +G A +
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN--CVTYNALIGGHCHVGDFEEALRLLD 1148
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ L + T G +L L K + + A ++ + + V Y ++ LCK
Sbjct: 1149 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 1208
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+E L+ ++ + G P + S + C G K +E++ + GL+L+ S
Sbjct: 1209 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 1268
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ +C + + +A+ ++ + D T +VL+ L +DG++ EA + +M +
Sbjct: 1269 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 1328
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V +S ++ +++ + + A D+M+K G P TY ++ G
Sbjct: 1329 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 179/451 (39%), Gaps = 20/451 (4%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ +C G + ++++ G + + M G VP + +++
Sbjct: 1289 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 1348
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYN 116
+ A + M++ G P+ FT+ + + LC+ G L+ G SVMYN
Sbjct: 1349 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 1408
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL-MV 175
++ K G+ A ++M N+ P TYSS+L G R K + + G M
Sbjct: 1409 TLLAETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAA-----EMIFKRACDEKIELQDDTCGCMLKAL 230
L P H + ++ LS G AA EM+ K C + + ++ +
Sbjct: 1468 RGTLFPNHVMY--TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN-----AIIDSC 1520
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S+ G++ +A + + G+ + Y ++ K+ L ++ G P
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 1580
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + G +LL ++ +G L D F + L+ Y + ++ KA L
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 1640
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
+ L D TY+ + +GL K E+ + M E V+ + ++ +++ +C + +
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ A K DEM +G E ++ G +
Sbjct: 1701 IQGAFKLKDEMEALGFGSHEVAESAMVRGLL 1731
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 165/427 (38%), Gaps = 40/427 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ Y KG + +E+ M G V N +D L + A L M ++
Sbjct: 1025 LLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM 1084
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAF 132
+SPN+ T++ + + GK V + + + V YN +I + GDF A
Sbjct: 1085 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 1144
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-------- 184
L+ M L TY ++L+G ++EK E++ R++ M ++ H
Sbjct: 1145 RLLDHM-EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 1203
Query: 185 ------------LSGNDY-------------VIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
L GN Y +I +G +A+ I R + L
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ + G V EA+++Y +++ G V+ LC++ + E L
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ G +P ++ + G ++ G F SL++ C
Sbjct: 1324 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 1383
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ +A ++ + G++D Y+ LL K G + EAV +FD M + V+ S ++
Sbjct: 1384 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 1443
Query: 399 IVVSRLC 405
+++ LC
Sbjct: 1444 SLLTGLC 1450
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 163/402 (40%), Gaps = 40/402 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG-AMVRDGVSPNKFT 84
G + + ++ M +P ++LL L R+ + A CL+G AM R + PN
Sbjct: 1418 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 1477
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + L ++G + + + +V +N +ID S++G A D + M
Sbjct: 1478 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM- 1536
Query: 140 NGRNLTPGFSTYSSILDGAR------RY--------------EKTEVSDRIVGLM----- 174
+ P +TY+ +L G RY +K I+GL
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596
Query: 175 -VEKKLLPKHFLSGN-------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ KLL K + G + +I K S+ GK A + + DT +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L+K+ +E+ + H + E G+ + + Y +N +C+ + L ++ G+
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+ S V GK ++ +L +L LL ++LM +C + +I +A+
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L +E LDV Y+VL+ G+ +G A +++ M+
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1818
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 175/427 (40%), Gaps = 17/427 (3%)
Query: 25 KGLFMDG--LEVYRMMRVYGFVP-AVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL G +E + + ++P AV + N LL + + A L+ MV++ V
Sbjct: 1377 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 1436
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGI------YSSVMYNLVIDFYSKKGDFGAAFD 133
P+ +T+S + LCR GK + L + + + VMY ++D SK G AAF
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 1496
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
EM + P +++I+D R + ++ M + P L+ + ++
Sbjct: 1497 FFEEMMK-KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN--LATYNILLH 1553
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S ++ E I T ++ LSK G +++ + G
Sbjct: 1554 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 1613
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ +N + + + L+ + G P + K ++E +L
Sbjct: 1614 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 1673
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK-GSLDVATYDVLLDGLFK 372
+L+ G++ +L+ C I A L ++E L GS +VA ++ GL
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE-SAMVRGLLH 1732
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G+ E+A+ + D+M ++++ + ++F ++ R C ++ +A+K M G K D
Sbjct: 1733 CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVA 1792
Query: 432 YKQVISG 438
Y +I G
Sbjct: 1793 YNVLIMG 1799
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++ KEG + A++ + L+ G + + K+ + E V L R++ ++G
Sbjct: 920 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 979
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C +G K+ LL + + G + ++L+ +YC + AI
Sbjct: 980 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039
Query: 346 ALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
L I KG DV TY+V +D L + R +A +
Sbjct: 1040 EL-IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL---------------------- 1076
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LK++RK M + P+E TY +I+GF+
Sbjct: 1077 --LKKMRKEMIS----------PNEVTYNTLINGFV 1100
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 193/429 (44%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G G V + G+ P N L+ L + +++ A + +
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
+ G N+ ++ + +C+ G + LL D + VMY+ +ID K
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLV 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM + ++ TYS+++ G K + + ++ MV K + P +
Sbjct: 216 SEAYGLFSEMTV-KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY-- 272
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L GK A+ + ++ T ++ VK+A +++ +S
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N CK +E L +++ ++ +P + S + C G+
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L+ + D+G + SSL++ C N +D+AIAL K++ + T+ +LLD
Sbjct: 393 VWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++A +F D + + ++ ++ +++ C L +A+ +M G P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIP 512
Query: 428 DEATYKQVI 436
D T++ +I
Sbjct: 513 DAVTFEIII 521
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 145/336 (43%), Gaps = 14/336 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++DAL + + A L+ M G+S + T+S + C GK + +GL
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ YN+++D K+G A L M + P TYS+++DG
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYF 315
Query: 160 RYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + + M + P + + N + K+ D A +FK + +
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD-----EALNLFKEMHQKNM 370
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR+ + + +RG Y + ++ LCK +
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIA 430
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++G P + + C G+ K+ +E+ +L KG L+ + + +++ +C
Sbjct: 431 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHC 490
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+++A+ + K+E D T+++++ LFK
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 7/222 (3%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++K L +G+VK+A+ + + +G + Y +N +CK LL+ +
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI 190
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
R P + S + + C E L S + KG+ D S+L+ +C ++
Sbjct: 191 DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
+AI L ++ + +V TY++L+D L K+G+++EA + M + V VI
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD---VITY 307
Query: 402 SRLCH----LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S L + E++KA + M MG PD TY +I+GF
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 38/252 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L + +K A+ + H + +GI +N C Q +L +++RG
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P + L+ + C KG+ K+ +L +G L+ +L+ C AI
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184
Query: 346 ALHIKIE----------------------------------KLKG-SLDVATYDVLLDGL 370
L KI+ +KG S DV TY L+ G
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+G+++EA+ + + M LK ++ + ++ I+V LC ++++A MLK KPD
Sbjct: 245 CIEGKLKEAIGLLNEMV-LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 429 EATYKQVISGFM 440
TY ++ G+
Sbjct: 304 VITYSTLMDGYF 315
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + H + +GI +N C Q +L +++RGY P + + +
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C KG+ + +L +G L+ +L+ C AI L KI+
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKN 416
DV Y+ ++D L K + +A +F M +K +S+ ++ ++ C + +L++A+
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEM-NVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123
Query: 417 HDEMLKMGHKPDEATYKQVI 436
++M+ P+ TY ++
Sbjct: 1124 LNKMVLKTINPNVRTYNILV 1143
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 12/199 (6%)
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQP----EEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ERG+T A++ + H P L + +G P L+ + C
Sbjct: 920 MAERGVT----SVGAYIRI---PHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 972
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ +L+ +L +G D+ ++L+ C Q++KA+ H K+ L+
Sbjct: 973 HMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQV 1032
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
+Y L++G+ K G A+++ + L + ++ LC + + KA EM
Sbjct: 1033 SYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEM 1092
Query: 421 LKMGHKPDEATYKQVISGF 439
G D TY +I GF
Sbjct: 1093 NVKGISADVVTYNTLIYGF 1111
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ G++ I I +RG + +N LC + Q + +
Sbjct: 963 TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ +G+ + + C G + +LL + + D +++++ C ++ +
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLV 1082
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVI 399
KA L ++ S DV TY+ L+ G G+++EA+ + + M LK ++ + ++ I
Sbjct: 1083 SKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMV-LKTINPNVRTYNI 1141
Query: 400 VVSRLCHLKELRKAMKNHDEMLKM-------GHKPDEATYKQVISGFM 440
+V LC KE + + DE L M G K + T++ +IS
Sbjct: 1142 LVDALC--KEGKDLL---DESLSMLSKMEDNGCKANAVTFEIIISALF 1184
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 74/174 (42%), Gaps = 6/174 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G + + G+ P L++ L + ++ A + +
Sbjct: 963 TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
+ G N+ ++ + +C+ G + LL D + VMYN +ID K
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLV 1082
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
A+ EM N + ++ TY++++ G K + + ++ MV K + P
Sbjct: 1083 SKAYGLFFEM-NVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 185/429 (43%), Gaps = 42/429 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V + + +G GL +R + G VP + CN +L L N+I +AS + MVR
Sbjct: 210 FVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRS 269
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
G SPN T+S + + C+ + + L YNL+I+
Sbjct: 270 GPSPNLVTFSTLINVYCKELRLDEAFSL----------YNLMIE---------------- 303
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSGNDYVIQK 194
+ + P YS +++G R K E + + + + + K+ F S D + +
Sbjct: 304 -----KGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYV-R 357
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ D+GK A ++ R E I T ++ L + GRV EA ++ I ++G+
Sbjct: 358 VGDLGK---AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + ++ CK + GL ++ +G++P + S + +G E
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ +GL L+++ ++L++ ++ + ++I + K DV TY VL+ GL + G
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534
Query: 375 RMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
R++EA+ +F + LK S +I ++ C ++ ++ M G PD
Sbjct: 535 RLDEALALF--FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592
Query: 432 YKQVISGFM 440
Y +I+ F
Sbjct: 593 YNVLINMFF 601
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 186/437 (42%), Gaps = 16/437 (3%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ S S +L CY G+ ++ + M G + A + +LD L + I +
Sbjct: 138 NPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILEN 197
Query: 70 YGAMVRD-GVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSVM-YNLVIDFYS 123
Y M + GV + V + G+ E L L++ G+ ++ N ++
Sbjct: 198 YEEMCKGLGV------YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLC 251
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
G A D + M +P T+S++++ + + + + + LM+EK ++P
Sbjct: 252 MGNQIGVASDFFDMMVR-SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L GK +F A +++ ++ A + G + +AI++Y
Sbjct: 311 VIY--SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + GI+ Y +N LC+ + E CG+ ++++G P + S + C
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
++ L +L KG + D CS L+ +D+A+ + K +L+ +
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ L+DG F+ R + ++++ M KV+ ++ ++V L L +A+ ++LK
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548
Query: 423 MGHKPDEATYKQVISGF 439
G PD Y +I GF
Sbjct: 549 KGFSPDHIIYCTLIDGF 565
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 193/462 (41%), Gaps = 44/462 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S ++D Y G +EVY M G P V + L++ L R + A ++G ++
Sbjct: 348 FSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQIL 407
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFG 129
+ G+ P+ T+S + C+S GL L G + V+ +++I+ S++G
Sbjct: 408 KQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A R R LT +++++DG R ++T ++ LM K++P +
Sbjct: 468 EAL-RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD--VVTYT 524
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L++ G+ A +F + + ++ K+ +QI+ L+
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN 584
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY----------------------- 286
GI Y +N+ +E E V LLR++++ G
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644
Query: 287 ------------IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
P A+ + + + C G+ + + S++L++G + S L++
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
Y + A L+ K+ + S ++ +Y +L+DGL K G MEEA F ++
Sbjct: 705 YFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPD 764
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
++ I++ C + L +AM +D ML G PD+ K +
Sbjct: 765 VIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 131/320 (40%), Gaps = 16/320 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DGL++Y +M +Y +P V L+ L Q + A L+ +++ G SP+ + +
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Query: 90 QILCR----SGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ + ++ + +GI+ + +YN++I+ + ++G + L E+ L
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK-YGL 621
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GK 200
P TY++++ G Y ++ + + L ++L N L D G+
Sbjct: 622 EPDIVTYNTMICG---YCSLKIFSKAIKLF---EVLKCGRTQPNAITFTILIDAYCKDGR 675
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +IF + E T C++ K + A ++Y + ++ Y
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK+ EE + + R +P + + C G+ E L +L G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795
Query: 321 LLLDSFCCSSLMEYYCSNRQ 340
++ D +L EY + Q
Sbjct: 796 IMPDDLLQKALAEYGFQDSQ 815
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ C + ++++D Y G D + ++ M G P + + L+D ++
Sbjct: 650 VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTE 709
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
A LY M+ D VSPN ++S++ LC+ G E
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 185/439 (42%), Gaps = 20/439 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D +D L +R M+ G V ALL L+++ + A + M
Sbjct: 48 SILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRD 107
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G PN T++ + LC++ + + L + S V YN ++D + G
Sbjct: 108 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 167
Query: 131 AFDRLNEMCNGRN------LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A EM + R+ +P TYS ++DG + + + ++ M + P
Sbjct: 168 AMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 227
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
++ L K AA + + D T +L L + RV +A+ +
Sbjct: 228 TY--TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 285
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++ RG T Y ++ LCK + ++ C +L D++++G P M + + C
Sbjct: 286 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 345
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E LL + G+ D SS++ C + ++D+A L + ++ DV Y
Sbjct: 346 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 405
Query: 365 VLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
L+DGL K G+++EA +++ M + VV+ S+ + LC + +A M
Sbjct: 406 TLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTL---IDGLCKAGRVDEAHLLLARM 462
Query: 421 LKMGHKPDEATYKQVISGF 439
++MG P TY +I G
Sbjct: 463 VRMGTPPSTMTYNSLIKGL 481
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 173/395 (43%), Gaps = 16/395 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-------DGVSPNKFTW 85
E++ M+ P++ N LLD L+R ++ A L+ M+ D SPN T+
Sbjct: 135 ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITY 194
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
S++ LC++ + + LL+S G V+ Y +++D K+ AA++ L EM +
Sbjct: 195 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 254
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
P TY+S+L G R + + ++ M + P G +I L +G+
Sbjct: 255 A-GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT--LIDGLCKVGR 311
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A + D+ ++ L K +V E+I + GI Y +
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LC+ ++ +E C LL V RG P + S + C GK E +L + G
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D S+L++ C ++D+A L ++ ++ TY+ L+ GL ++EA+
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
+ + M+ S+ ++ I++ +C ++ + A+
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 179/406 (44%), Gaps = 14/406 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEV 100
P V + L+D L + N + A L +M G SP+ T++++ LC+ K +EV
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 101 VLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ +LD+G + + V YN ++ + A + +M R TP TY +++DG
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLIDGLC 307
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + + ++ M++K P + + +I L + + + +RA I+
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIY--NMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L + R+ EA ++ + RG Y ++ LCK + +E L
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ G + S + C G+ E LL+ ++ G + +SL++ C
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS--- 396
+D+AI L ++E+ + TY++L+ G+ + R++ AV + + K V + +
Sbjct: 486 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALD 545
Query: 397 ---FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ LC + +A+ EM+ G PD TY ++ G
Sbjct: 546 TIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 24/406 (5%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++S + R D ++ +++D + EV R M G VP + N+LL L
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC 272
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM 114
R + A L M G +PN T+ + LC+ G+ + ++ ++D G +M
Sbjct: 273 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 332
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN++I+ K + L +G + P TYSS++ G R + + + R++
Sbjct: 333 IYNMLINGLCKADQVDESIALLRRAVSG-GIKPDVVTYSSVIYGLCRSNRLDEACRLLLY 391
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKA 229
+ + P L +I L GK A E++ CD + T ++
Sbjct: 392 VKSRGCPPDVILYST--LIDGLCKAGKVDEAFDLYEVMAGDGCDADVV----TYSTLIDG 445
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K GRV EA + + G Y + + LC + +E L+ ++ P
Sbjct: 446 LCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 505
Query: 290 AMELSRFVASQCGKGKWKEVEELLS-----AVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
A+ + + C + LL V G LD+ SSL++ C ++ +A
Sbjct: 506 AVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEA 565
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKEL 389
+ ++ D TY +LL+GL K + E + D M +L
Sbjct: 566 LDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQL 611
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 196/429 (45%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G G V + G+ P N L+ L + +++ A + +
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSSV--MYNLVIDFYSKKGDF 128
+ G N+ +++ + +C+ G + LL D + MY+ +ID K
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM + ++ TYS+++ G K + + ++ MV K + P +
Sbjct: 216 SEAYGLFSEM-TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY-- 272
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L GK A+ + ++ T ++ VK+A +++ +S
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N CK +E L +++ ++ +P + S + C G+
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L+ + D+G D SSL++ C N +D+AIAL K++ + ++ T+ +LLD
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++A +F D + + ++ ++ ++++ C L +A+ +M G P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512
Query: 428 DEATYKQVI 436
+ T++ +I
Sbjct: 513 NAFTFETII 521
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 148/350 (42%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++DAL + + A L+ M G+S + T+S + C GK + +GL
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ YN+++D K+G A L M + P TYS+++DG
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYF 315
Query: 160 RYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + + M + P + + N + K+ D A +FK + +
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD-----EALNLFKEMHQKNM 370
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR+ + + +RG Y + ++ LCK +
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ P + + C G+ K+ +E+ +L KG L+ + + ++ +C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+++A+ + K+E + T++ ++ LFK ++A ++ M
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 8/283 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ---ILCRSGKFEVV 101
P V N L+DAL ++ +++ A + M++ V P+ T+S + ++ K + V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 102 LGLLD-SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ G+ V Y ++I+ + K A + EM + +N+ PG TYSS++DG
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM-HQKNMVPGIVTYSSLIDGLC 385
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + ++ M ++ P ++ + +I L G A +F + D++I
Sbjct: 386 KSGRIPYVWDLIDEMRDRGQ-PADVITYSS-LIDGLCKNGHLDRAIALFNKMKDQEIRPN 443
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L K GR+K+A +++ + +G + Y +N CK+ EE +L
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ + G IP A + + K + + E+LL ++ +GLL
Sbjct: 504 KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 10/313 (3%)
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + N M R+ TP ++ ILD + + + + + K + P L +
Sbjct: 43 AVSQFNRMLCMRH-TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD--LITLNI 99
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I MG+ + + T ++K L +G+VK+A+ + + +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y +N +CK LLR + R P S + + C E
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L S + KG+ D S+L+ +C ++ +AI L ++ + +V TY++L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHK 426
K+G+++EA + M + V VI S L + E++KA + M MG
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPD---VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336
Query: 427 PDEATYKQVISGF 439
PD TY +I+GF
Sbjct: 337 PDVHTYTILINGF 349
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 185/405 (45%), Gaps = 9/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P + N L+ L+ + ++ A L MV +G P+ T++ + +CRSG +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL + + + V Y+ +ID + G AA EM + + TY+S++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVR 271
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K ++ MV ++++P + ++ N ++ GK A ++K I
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVP-NVITFN-VLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + R+ EA + L+ + + + + C + ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ R++ +RG + A+ S V C GK K EEL ++ G+L D L++ C
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
N +++KA+ + ++K K L + Y +++G+ K G++E+A +F + V +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ +++S LC L +A +M + G+ P++ TY +I +
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 176/380 (46%), Gaps = 9/380 (2%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVID 120
A L+ M+R P+ +S + R+ +F +VL +GI ++ N++I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A+ L ++ P +T+++++ G K + +V MVE
Sbjct: 132 CFCRCCKTCFAYSVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ + G T A + ++ + ++ T ++ +L ++G + AI
Sbjct: 191 PD--VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + +GI Y + V LCK + + LL+D+V R +P + + +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+GK +E EL ++ +G+ + ++LM+ YC ++ +A + + + K S D+
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T+ L+ G R+++ +++F + + +V+++ ++ I+V C +++ A + E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G PD TY ++ G
Sbjct: 429 MVSHGVLPDVMTYGILLDGL 448
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 182/428 (42%), Gaps = 60/428 (14%)
Query: 25 KGLFMDG------LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
KGLF++G + V RM+ G P V N++++ + R + LA L M V
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFD 133
+ FT+S + LCR G + + L GI SSV+ YN ++ K G +
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND---- 189
L +M + R + P T++ +LD + K + ++ + M+ + + P + ++ N
Sbjct: 285 LLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP-NIITYNTLMDG 342
Query: 190 YVIQ-KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
Y +Q +LS+ +++ + C I T ++K RV + ++++ IS+
Sbjct: 343 YCMQNRLSEANNML--DLMVRNKCSPDIV----TFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ Y V C+ + + L +++V G +P M + C GK ++
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 309 V----EELLSAVLDKGLLL------------------DSFCC-------SSLMEY----- 334
E+L + +D G+++ + FC ++M Y
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 335 -YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + +A L K+E+ + + TY+ L+ +DG + + ++ + MK +
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 394 SSSFVIVV 401
+S + +V
Sbjct: 577 DASSIKMV 584
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/378 (18%), Positives = 164/378 (43%), Gaps = 10/378 (2%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ E R+ ++D S ++D G + +++ M G +V N+L+ L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM 114
+ + + L MV + PN T++++ + + GK E+ ++ GI +++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++D Y + A + L+ M + +P T++S++ G ++ + ++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ ++ L+ ++Q GK AE +F+ + T G +L L
Sbjct: 394 ISKRGLVANAVTYS--ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G++++A++I+ + + + + Y + +CK + E+ L + +G P M
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ ++ C KG E LL + + G + ++L+ + + + + L +++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 354 LKGSLDVATYDVLLDGLF 371
S D ++ +++D L
Sbjct: 572 CGFSADASSIKMVIDMLL 589
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ L ++++ +P ++ SRF ++ ++ V + + G+ + + +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE- 388
++ +C + A ++ K+ KL D T++ L+ GLF +G++ EAV + D M E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 389 ---LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
VV+ +S +V+ +C + A+ +M + K D TY +I
Sbjct: 188 GCQPDVVTYNS---IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 185/428 (43%), Gaps = 42/428 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V + + +G GL +R + G VP + CN +L L N+I +AS + MVR
Sbjct: 210 FVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRS 269
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
G SPN T+S + + C+ + + L YNL+I+
Sbjct: 270 GPSPNLVTFSTLINVYCKELRLDEAFSL----------YNLMIE---------------- 303
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK--KLLPKHFLSGNDYVIQK 194
+ + P YS +++G R K E + + + + + K+ F S D + +
Sbjct: 304 -----KGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYV-R 357
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ D+GK A ++ R E I T ++ L + GRV EA ++ I ++G+
Sbjct: 358 VGDLGK---AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + ++ CK + GL ++ +G++P + S + +G E
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ +GL L+++ ++L++ ++ + ++I + K DV TY VL+ GL + G
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534
Query: 375 RMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
R++EA+ +F + LK S +I ++ C ++ ++ M G PD
Sbjct: 535 RLDEALALF--FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592
Query: 432 YKQVISGF 439
Y +I+ F
Sbjct: 593 YNVLINMF 600
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 186/437 (42%), Gaps = 16/437 (3%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ S S +L CY G+ ++ + M G + A + +LD L + I +
Sbjct: 138 NPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILEN 197
Query: 70 YGAMVRD-GVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSVM-YNLVIDFYS 123
Y M + GV + V + G+ E L L++ G+ ++ N ++
Sbjct: 198 YEEMCKGLGV------YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLC 251
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
G A D + M +P T+S++++ + + + + + LM+EK ++P
Sbjct: 252 MGNQIGVASDFFDMMVRS-GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD- 309
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
L +I L GK +F A +++ ++ A + G + +AI++Y
Sbjct: 310 -LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + GI+ Y +N LC+ + E CG+ ++++G P + S + C
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
++ L +L KG + D CS L+ +D+A+ + K +L+ +
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ L+DG F+ R + ++++ M KV+ ++ ++V L L +A+ ++LK
Sbjct: 489 NALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548
Query: 423 MGHKPDEATYKQVISGF 439
G PD Y +I GF
Sbjct: 549 KGFSPDHIIYCTLIDGF 565
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 193/462 (41%), Gaps = 44/462 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S ++D Y G +EVY M G P V + L++ L R + A ++G ++
Sbjct: 348 FSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQIL 407
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFG 129
+ G+ P+ T+S + C+S GL L G + V+ +++I+ S++G
Sbjct: 408 KQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A R R LT +++++DG R ++T ++ LM K++P +
Sbjct: 468 EAL-RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD--VVTYT 524
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L++ G+ A +F + + ++ K+ +QI+ L+
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN 584
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY----------------------- 286
GI Y +N+ +E E V LLR++++ G
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644
Query: 287 ------------IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
P A+ + + + C G+ + + S++L++G + S L++
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
Y + A L+ K+ + S ++ +Y +L+DGL K G MEEA F ++
Sbjct: 705 YFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPD 764
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
++ I++ C + L +AM +D ML G PD+ K +
Sbjct: 765 VIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 131/320 (40%), Gaps = 16/320 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DGL++Y +M +Y +P V L+ L Q + A L+ +++ G SP+ + +
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Query: 90 QILCR----SGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ + ++ + +GI+ + +YN++I+ + ++G + L E+ L
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK-YGL 621
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GK 200
P TY++++ G Y ++ + + L ++L N L D G+
Sbjct: 622 EPDIVTYNTMICG---YCSLKIFSKAIKLF---EVLKCGRTQPNAITFTILIDAYCKDGR 675
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +IF + E T C++ K + A ++Y + ++ Y
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK+ EE + + R +P + + C G+ E L +L G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795
Query: 321 LLLDSFCCSSLMEYYCSNRQ 340
++ D +L EY + Q
Sbjct: 796 IMPDDLLQKALAEYGFQDSQ 815
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ C + ++++D Y G D + ++ M G P + + L+D ++
Sbjct: 650 VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTE 709
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
A LY M+ D VSPN ++S++ LC+ G E
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 197/424 (46%), Gaps = 19/424 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G+ V+ + G + V + N+L+ + + ++ M +G
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG 209
Query: 78 VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAA 131
+ P+ F+++ + L S KF E V ++++G V YN +I Y + G A
Sbjct: 210 IEPSLFSYNFLVNGLVNS-KFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKA 268
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL---MVEKKL-LPKHFLSG 187
F++L M RN+ P TY +++ Y + + D +GL M EK L +P H S
Sbjct: 269 FEKLKAM-ELRNVAPDKITYMTLIQAC--YAEGDF-DSCLGLYHEMDEKGLEIPPHVYS- 323
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
VI L GK +F+ + + ++ + +K G + EA+ ++ +
Sbjct: 324 --LVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMK 381
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ G+ + Y VN LCK + +E + +G AM S + G+
Sbjct: 382 KEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVD 441
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E E + ++ KG DS+C ++L++ +ID+A+AL ++E V TY +L+
Sbjct: 442 EAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILI 501
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GLF++ R EEA+ ++D M + + ++++F + + LC ++ +A K DEM MG
Sbjct: 502 TGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVI 561
Query: 427 PDEA 430
P+ A
Sbjct: 562 PETA 565
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 136/319 (42%), Gaps = 42/319 (13%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + SLV+ G ++G V+ M G V+ AL+D+ + +
Sbjct: 313 KGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGE 372
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+ M ++G+ P++ T+ ++ LC+SG+ + L +
Sbjct: 373 AMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYM-------------------- 412
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
E C+G+ + YSS++DG + + + ++RI MV+K P +
Sbjct: 413 -----------EFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYC 461
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKR----ACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I L+ GK A + KR CD+ + T ++ L +E R +EA+
Sbjct: 462 Y--NALIDALAKCGKIDEALALSKRMEVDGCDQTVY----TYTILITGLFREHRNEEALT 515
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ L+ ++GIT + + A LC + C +L ++ G IP + C
Sbjct: 516 LWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIP-ETAFDDMINILC 574
Query: 302 GKGKWKEVEELLSAVLDKG 320
G+ KE +L ++D+G
Sbjct: 575 KAGRIKEACKLADGIVDRG 593
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 126/296 (42%), Gaps = 6/296 (2%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L+P F ++ IL K +V+ R ++K H L +I L+ G +
Sbjct: 106 LSPSFVSF--ILRSTELQTKPDVAIRFFTWAGKQKKY-THNLECYVSLIDVLATNGVLDS 162
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+ +F + + + + + ++K+ G V+E + ++ + E GI Y VN
Sbjct: 163 VKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVN 222
Query: 264 VLCKEHQPEEVCGLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L E + +V+E G I P + + + C GK ++ E L A+ + +
Sbjct: 223 GLVNSKFIESAERVF-EVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVA 281
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +L++ + D + L+ ++++ + Y +++ GL KDG+ E +
Sbjct: 282 PDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTV 341
Query: 383 FDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
F+ M ++ + + ++ + +AM M K G +PDE TY +++
Sbjct: 342 FENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVN 397
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 183/412 (44%), Gaps = 10/412 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++Y M+ P V N+L+ + AS L+ V ++ N FT++ + L
Sbjct: 405 DLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWL 463
Query: 93 CRSGKFEVVLGL----LDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ GK L LD G+ + V YN +I + ++G+ A ++M + L P
Sbjct: 464 CKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC-GLKPN 522
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++DG + TE + + MV++ ++P F + I L +G+T A+ +
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTY--NIKINGLCKVGRTSEAQDM 580
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K+ ++ T ++ KEG V A+ Y + E G++ Y +N CK
Sbjct: 581 LKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCK 640
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ + + ++ +G + C K + L S +LD GL +S
Sbjct: 641 NNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVI 700
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+SL+ Y + ++ A+ L ++ S D+ TY L+DGL K+GR+ A+ ++ M
Sbjct: 701 YNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMS 760
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ + ++++ LC +L A K EM + P+ Y +I+G
Sbjct: 761 AKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAG 812
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 172/441 (39%), Gaps = 39/441 (8%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G+VP+ +++ A +Q + A L MV GV N + + + C+ K
Sbjct: 305 MRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDK 364
Query: 98 FEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L D + V Y ++I++ K G+ A+D +M N +N+ P +
Sbjct: 365 LVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN-KNICPTVFIVN 423
Query: 153 SILDGARRYEKTEVSDR---------IVGLMVEKKLLP----KHFLSGNDYVIQKLSDMG 199
S++ G + E E + + I + LL + +S + QK+ D G
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483
Query: 200 KTYA-------------------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
A +F D ++ T ++ K G + A
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + I D Y +N LCK + E +L+ VE+G++P + + +
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+G + + G+ + ++L+ +C N D A+ + ++ LD+
Sbjct: 604 IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDE 419
A Y L+DG K +E A +F + + + +S + ++S +L + A+
Sbjct: 664 AAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKR 723
Query: 420 MLKMGHKPDEATYKQVISGFM 440
ML G D TY +I G +
Sbjct: 724 MLGEGISCDLQTYTTLIDGLL 744
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 128/318 (40%), Gaps = 39/318 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V + L+D ++ + A ++ MV + + P+ FT+++ LC+ G+
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+L + + YN ++D + K+G +A EMC ++P TY+++++
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCES-GVSPNVITYTTLIN 636
Query: 157 GARRYEKTEVSDRIVGLMVEKKL-----------------------------LPKHFLSG 187
G + T+++ ++ M K L L LS
Sbjct: 637 GFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSP 696
Query: 188 NDYVIQKL----SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
N + L ++ AA + KR E I T ++ L KEGR+ A+ +Y
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+S +GI Y +N LC + Q E +L ++ P + +A
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA 816
Query: 304 GKWKEVEELLSAVLDKGL 321
G +E L + +LDKGL
Sbjct: 817 GNLQEAFRLHNEMLDKGL 834
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 126/300 (42%), Gaps = 37/300 (12%)
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+VE ++P ++ ++++ L Y A ++++ + + T M++A K+
Sbjct: 200 LVESDIVP--WIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKD 257
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
+EA + + RG+ + + Y + CK E CGLL+D+ ++G++P
Sbjct: 258 NNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTF 317
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + + +G E L ++ G+ ++ ++L++ YC ++ A+ K+ +
Sbjct: 318 TSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNE 377
Query: 354 LKGSLDVATYDVLLDGLFKDGRM-----------------------------------EE 378
S + TY VL++ K+G M EE
Sbjct: 378 NGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREE 437
Query: 379 AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
A ++FD + + ++ ++S LC ++ +A +ML G P + +Y +I G
Sbjct: 438 ASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILG 497
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 185/418 (44%), Gaps = 9/418 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL G++ EV++ M +G P V + L+ R EI A +Y M G
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAF 132
+ P+ ++S + + R GK + + L + V+Y +VI + + G A
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+EM G P TY+++L+G + + ++ ++ M E+ + P L +I
Sbjct: 352 RVRDEMV-GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD--LCTFTTLI 408
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
GK A +F ++++ T ++ + ++G + +A ++ + R I
Sbjct: 409 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIF 468
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C++ Q E+ G L +++ +G +P M + + C G + ++
Sbjct: 469 PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 528
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ + D ++L+ Y ++ A L +EK K DV TY++L++G
Sbjct: 529 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 588
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G ++EA IF+ M + +++ +++ ++A + HDEML+ G PD+
Sbjct: 589 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 185/436 (42%), Gaps = 46/436 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEV 100
P V N ++DA +R + A L +MV G+ P T++ V + LCRSG +EV
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248
Query: 101 VLGLLDSGIYSSVM------------------------------------YNLVIDFYSK 124
+ D G+ V ++ +I +++
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308
Query: 125 KGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+G A L EM C G L P Y+ ++ G R + R+ MV LP
Sbjct: 309 RGKMDHAMAYLREMRCFG--LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD- 365
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ + ++ L + AE + + + T ++ EG++ +A+Q++
Sbjct: 366 -VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + Y ++ +C++ ++ L D+ R P + S + S C K
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ ++ L +++KG+L + +S+++ YC + + K K+ K S D+ TY
Sbjct: 485 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 544
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ L+ G K+ +M +A ++ + M++ KV ++ ++++ +++A ++M
Sbjct: 545 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 423 MGHKPDEATYKQVISG 438
G +PD TY +I+G
Sbjct: 605 KGIEPDRYTYMSMING 620
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I+ + K A F+ D ++ + +L ALS+ G A Y L+
Sbjct: 90 DLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFS 149
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
V V+ CK + ++V ++ ++ +R P + + V ++ G +
Sbjct: 150 SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 209
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L+ +++ KGL +S+++ C + DKA + +++ + DV ++ +L+
Sbjct: 210 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + G +EEA++I+ M+ + SF ++ ++ AM EM G P
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 428 DEATYKQVISGF 439
D Y VI GF
Sbjct: 330 DGVIYTMVIGGF 341
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 207/465 (44%), Gaps = 52/465 (11%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL--YGAMV 74
L+ Y+ +F + LE + M GF +C L AL R ++ SCL + MV
Sbjct: 160 LLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVD--SCLRFFRRMV 217
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFG 129
V ++ ++V LC+ G E+ L+D G+ ++V+ YN I+ Y K+ D G
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 130 AAFDRLNEM------CNGRNLT---PGFSTYSSILDGARRYEKTE---------VSDRIV 171
+ L M CN T GFS I + R +E+ V I+
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
Query: 172 GL----------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
M +K L+P G +I + G+ AA+M+ +
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG--ALIHGVCKAGQMEAAQMLVNEMQGKG 395
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV---LCKEHQPE 272
I+L ++ + G V EA+++ ++ ++G+ +SD +A+ ++ LCK ++ +
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL---ESDVFAYNSIASGLCKLNRKD 452
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E GLL +VERG P M + + C +G + E + + + +KG + + + L+
Sbjct: 453 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 512
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ Y + +A L ++E DV T L+ G DG+++ A+++FD M + +V
Sbjct: 513 DGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV 572
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ ++S L +A K +DEM + G PD+ Y ++
Sbjct: 573 PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 154/378 (40%), Gaps = 78/378 (20%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L++ +S+ G + ++ MR G V +++ R ++ A L+ M
Sbjct: 299 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 358
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGA 130
G+ P+ T+ + +C++G+ E L++ GI + V++N +ID Y + G
Sbjct: 359 KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 418
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A RL + + L Y+SI G + + + + ++ MVE+ + P
Sbjct: 419 AL-RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN-------- 469
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
M F L D C KEG EA +++
Sbjct: 470 --------------TMSF-------TTLIDIYC--------KEGNFVEAKRVF------- 493
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
R++ E+G +P + + + +G KE
Sbjct: 494 ----------------------------REMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L + ++GL+ D + C+SL+ C + ++D A+ L ++ + +V TY ++ GL
Sbjct: 526 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 585
Query: 371 FKDGRMEEAVRIFDYMKE 388
KDGR EEA +++D MKE
Sbjct: 586 SKDGRSEEAFKLYDEMKE 603
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 43/265 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++D Y G+ + L + +M G V A N++ L + N
Sbjct: 394 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 453
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVID 120
A L +MV GVSPN +++ + I C+ G F V + + G + + + YN++ID
Sbjct: 454 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 513
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
YSK+G+ A +E+ N R L P T +S++ G K +++ ++ M ++ L+
Sbjct: 514 GYSKRGNMKEAHKLKDELEN-RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV 572
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P V+ TY A M+ LSK+GR +EA
Sbjct: 573 PN--------VV--------TYTA---------------------MISGLSKDGRSEEAF 595
Query: 241 QIYHLISERGITVRDSDYYAFVNVL 265
++Y + E G+T D+ Y + V L
Sbjct: 596 KLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA++ + + ++G + + ++ L + Q + R +V L+ +
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 232
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C +G + +L+ V KG+ + ++ +E Y + + +EK +
Sbjct: 233 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 292
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMK 415
+V TY +L+ G G++EEA R+F+ M+E K + + +V ++S C +++A+
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE-KGIEADVYVYTSIISCNCRSGNVKRALV 351
Query: 416 NHDEMLKMGHKPDEATYKQVISG 438
DEM G P TY +I G
Sbjct: 352 LFDEMTDKGLIPSAHTYGALIHG 374
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 176/398 (44%), Gaps = 19/398 (4%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG 108
L+D L + ++ A L+ ++ GV+P+ ++ + LC + F E+ + G
Sbjct: 16 LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75
Query: 109 IYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
S V YN++ID K+G A D + +M ++ P TY++++DG + + E +
Sbjct: 76 CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSGRVEEA 134
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ M P ++ +I L K A +F I + G ++
Sbjct: 135 LLLFNEMERLGCTPNR--RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L+K G++ EA +++ + + GIT Y ++ +C + +E L + + +G
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + C +GK E LL + D G + D S+L+ CS ++D A L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------SFVIVV 401
+ K + V T + L+ GL K GR++EA + D M VSS ++ +V
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM-----VSSGQSPDVVTYNTLV 367
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + +A + +M+ G P+ TY ++SG
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 186/440 (42%), Gaps = 11/440 (2%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R+ D+ S +++D + G D ++++ + G P+ A +L+ L N
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L+ M R G P+ T++++ C+ G E L+ D + V YN V+D
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A NEM TP ++++I+ G + K + + ++ M + +
Sbjct: 124 GLCKSGRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + G +I L+ GK A +F+R D I T ++ + + EA+
Sbjct: 183 PDSWSYG--ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ + +G + ++ CK + +E LL+ + + G++P + S ++
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C + + LL ++ + ++L+ C +I +A + + S DV
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
TY+ L+ G + G+ E A + M + + ++ +VS LC L +A +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 420 MLKMGHKPDEATYKQVISGF 439
M G P+ TY +I GF
Sbjct: 421 MKSSGCAPNLFTYTALILGF 440
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 174/411 (42%), Gaps = 9/411 (2%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F D E++ M G P+ N ++DA ++ + A L M+ DG P+ T++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 88 VAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
V LC+SG+ E L L + + +N +I ++ A +EM R
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EAR 179
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
++ P +Y ++DG + K + ++ M++ + P + VI +
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTY--NVVIHGMCLAYTLD 237
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +FK + T ++ A K G++ EA ++ +++ G Y +
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LC + ++ LL D+V+R P + + + C G+ KE E+L A++ G
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D ++L+ +C Q ++A L + + +V TY L+ GL K R+ EA +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
F MK + ++ ++ C ++ +K EM+ G PD Y
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 181/436 (41%), Gaps = 19/436 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V+D G + L ++ M G P + N ++ L +Q++I A ++ M
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
+ P+ +++ ++ L ++GK +++ +LDSGI S+V YN+VI
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M + P T++ ++D + K + + R++ M + +P +
Sbjct: 239 ALELFKSM-RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPD--VVTYST 295
Query: 191 VIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I L + + A E + KR C + Q+ ++ L K GR+KEA ++ +
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT----LIHGLCKAGRIKEAREVLDAM 351
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G + Y V+ C+ Q E LL D+V RG P + + V+ C +
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E + + + G + F ++L+ +CS Q+D + L ++ S D Y L
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 367 LDGLFKDGRMEEAVRIFDYMKE---LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L K GR A+ I +E + + V L ++ A+ +M++
Sbjct: 472 AAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRG 531
Query: 424 GHKPDEATYKQVISGF 439
G P +++G
Sbjct: 532 GQLPAPERCASLVAGL 547
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 156/376 (41%), Gaps = 8/376 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G+ + ++ + M G VP V N ++D L + + A L+ M R
Sbjct: 84 NVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMER 143
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
G +PN+ + + + LC+ K + + S Y ++ID +K G
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNE 203
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A+ M + +TP TY+ ++ G + + + M K P F +
Sbjct: 204 AYKLFRRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF--NI 260
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I GK A + KR D+ T ++ L RV +A + + +R
Sbjct: 261 LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
++ LCK + +E +L +V G P + + V C G+ +
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
ELLS ++ +GL + ++L+ C ++ +A + +++ + ++ TY L+ G
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440
Query: 371 FKDGRMEEAVRIFDYM 386
G+++ +++F M
Sbjct: 441 CSAGQVDGGLKLFGEM 456
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 122/298 (40%), Gaps = 38/298 (12%)
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
N RN++P +Y ++DG L+ G
Sbjct: 2 NERNVSPDSWSYGILIDG-------------------------------------LAKAG 24
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A +F++ + ++ L +A +++ ++ RG Y
Sbjct: 25 KLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 84
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ CK EE C L++ ++E G++P + + + C G+ +E L + +
Sbjct: 85 VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G + ++++ C +ID+A + ++E D +Y +L+DGL K G++ EA
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++F M + + S+ ++ +V+ +C L +A++ M G +P T+ +I
Sbjct: 205 YKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 121/312 (38%), Gaps = 10/312 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + +G + + + M G VP V + L+ L + A L M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V+ P T + + LC++G+ + +LD+ + S V YN ++ + + G
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + L++M R L P TY++++ G + + + + M P F
Sbjct: 377 ERARELLSDMV-ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY-- 433
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I G+ +F I G + L K GR A++I E
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
Query: 249 --RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
R D Y V+ L + E G +RD+V G +P + VA C G+
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553
Query: 307 KEVEELLSAVLD 318
E +L ++D
Sbjct: 554 GEARAVLEEIMD 565
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 187/431 (43%), Gaps = 11/431 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++ Y L + ++ M GFVP V ACN +L+ L + LY M
Sbjct: 189 FEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMG 248
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFG 129
R GV N +T++++ +LCR G + G L + G V+ YN +ID Y ++G
Sbjct: 249 RIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLE 308
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF L ++ R + P +Y+S++ G R + + ++ M+++ + P L
Sbjct: 309 DAF-YLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT- 366
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A + I TC +++ +EGR+ A+ + I +
Sbjct: 367 -LIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKL 425
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+TV Y + LC+E +P LL ++E + P + ++ + S C E
Sbjct: 426 GVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEA 485
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCS-NRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++++ + SL+ C NR +D L +++ + + D L++
Sbjct: 486 LLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGE-GLMVEMVESEVIPDHEICRALVN 544
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K+G ++A + + K+ + S SF +V + K M+ D MLK G P
Sbjct: 545 GYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLP 604
Query: 428 DEATYKQVISG 438
+ T + +I G
Sbjct: 605 NSLTCRYIIHG 615
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 190/404 (47%), Gaps = 17/404 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A NAL++ + N I A+ + M SP+ T++++ LC GK ++ L +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211
Query: 105 LDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LD + + + Y ++I+ +G A L+EM + R L P TY++I+ G
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLS-RGLKPDMFTYNTIIRGMC 270
Query: 160 RYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K + DR ++ +E K +S N +++ L + GK E + + EK +
Sbjct: 271 ---KEGMVDRAFEMIRNLELKGCEPDVISYN-ILLRALLNQGKWEEGEKLMTKMFSEKCD 326
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ L ++G+++EA+ + L+ E+G+T Y + C+E + +
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L ++ G +P + + +A+ C GK + E+ + + G +S +++ S
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 338 NRQIDKAIALHIKIEKLKGSLDV--ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS- 394
+ DK ALH+ +E + +D TY+ ++ L ++G +++A + M+ + S
Sbjct: 447 SG--DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ IV+ C + A+ D M+ G +P+E TY +I G
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ K R+ +A ++ + + + Y + LC + + +L ++
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + + +G E +LL +L +GL D F ++++ C +D+A
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279
Query: 346 ALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSR 403
+ I+ +LKG DV +Y++LL L G+ EE ++ M K + ++ I+++
Sbjct: 280 EM-IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 338
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC ++ +AM M + G PD +Y +I+ F
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + E LL ++ KG D C+ L++ + + R + KA+ + +EK G DV
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKF-GQPDV 154
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
Y+ L++G K R+++A R+ D M+ + ++ I++ LC +L A+K D+
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 420 MLKMGHKPDEATYKQVISGFM 440
+L +P TY +I M
Sbjct: 215 LLSDNCQPTVITYTILIEATM 235
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 14/272 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G+ E+ R + + G P V + N LL AL Q + L M + PN T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
+S++ LCR GK E + LL + G+ Y+ +I + ++G A + L M
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ L P Y+++L + K + + I G + E P S + + L G
Sbjct: 392 SDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS--SSYNTMFSALWSSG 448
Query: 200 -KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-- 256
K A MI + + I+ + T M+ L +EG V +A ++ L+ R S
Sbjct: 449 DKIRALHMILEMVSN-GIDPDEITYNSMISCLCREGMVDKAFEL--LVDMRSCEFHPSVV 505
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
Y + CK H+ E+ +L +V G P
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRP 537
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE++ + G P S+ N + AL+ + A + MV +G+ P++ T++ +
Sbjct: 418 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMIS 477
Query: 91 ILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LCR G FE+++ + + SV+ YN+V+ + K A D L+ M G
Sbjct: 478 CLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMV-GNGCR 536
Query: 146 PGFSTYSSILDG----ARRYEKTEVSDRIV 171
P +TY+ +++G R E E+++ +V
Sbjct: 537 PNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ G + + + ++M+ G P + + L+ A R+ + +A M+
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
DG P+ ++ V LC++GK E+ L + G +S YN + GD
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 452
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSIL 155
A + EM + + P TY+S++
Sbjct: 453 ALHMILEMVSN-GIDPDEITYNSMI 476
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 180/418 (43%), Gaps = 49/418 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ ++++ M+ P V L+ AL A L M G+ PN T++++
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 90 QILCRSGKFEV---VLG-LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC K E +LG +L+ G+ +V+ YN +I+ Y K+G A D + E+ RNL
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV-ELMESRNL 424
Query: 145 TPGFSTYSSILDGARRYEKTEVSDR--IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
P TY+ ++ G Y K V ++ M+E+K+LP D V TY
Sbjct: 425 RPNTRTYNELIKG---YCKRNVHKAMGVLNKMLERKVLP-------DVV---------TY 465
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+ L D C + G A ++ L+++RG+ Y + +
Sbjct: 466 NS-------------LIDGQC--------RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCK + EE C L + ++ IP + + + C GK E +L +L K L
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL 564
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+S ++L+ C++ ++ +A L K+ K+ V+T +L+ L KDG + A R
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 383 FDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F M + ++ + C L+ A +M + G PD TY +I G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGY 682
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/501 (19%), Positives = 203/501 (40%), Gaps = 97/501 (19%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L + + M G P + L+D+L Q ++ A L G M+ G+ PN T++ +
Sbjct: 341 EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400
Query: 90 QILCRSGKFEVVL----------------------------------GLLDSGIYSSVM- 114
C+ G E L G+L+ + V+
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLP 460
Query: 115 ----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
YN +ID + G+F +A+ RL + N R L P TY+S++D + ++ E + +
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAY-RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL 519
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ +K ++P + +I GK A ++ ++ + T ++ L
Sbjct: 520 FDSLEQKDVIPNVVMYTA--LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+G++KEA + + + + S ++ L K+ + + ++ G P A
Sbjct: 578 CTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDA 637
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA---- 346
+ F+ + C +G+ ++ E++++ + + G+ D F SSL++ Y + + A
Sbjct: 638 HTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR 697
Query: 347 --------------------LHIKIEKLKG-----------------------------S 357
L +K K+KG +
Sbjct: 698 MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVT 757
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMK 415
+ +Y+ L+ G+ + G + A ++FD+M++ + +S S V ++S C L++ +A K
Sbjct: 758 PNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAK 817
Query: 416 NHDEMLKMGHKPDEATYKQVI 436
D+M+ +GH P + K +I
Sbjct: 818 VVDDMICVGHLPQLESCKILI 838
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 213 DEKIELQDD-TCGC---MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
DE EL+ GC +L +L++ G V E Q+Y + E + Y VN CK
Sbjct: 172 DESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKV 231
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
EE + +VE G P + + C + ++ + KG +
Sbjct: 232 GNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY 291
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ C R+ID+A+ L +K++ V TY VL+ L R EA+ + M+E
Sbjct: 292 THLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE 351
Query: 389 LKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ +++ LC +L KA + +ML+ G P+ TY +I+G+
Sbjct: 352 KGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 155/388 (39%), Gaps = 65/388 (16%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P V AL+D + ++ A + M+ PN T++ + LC GK +
Sbjct: 529 IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL 588
Query: 104 LLDSGIYSSVMYN-----LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L + + + ++I K GDF A+ R +M + P TY++ +
Sbjct: 589 LEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSS-GTKPDAHTYTTFIQTY 647
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
R + + ++ +V M E + P F + +I+ D+G+T +A ++ KR D E
Sbjct: 648 CREGRLQDAEDMVAKMKENGVSPDLFTYSS--LIKGYGDLGRTNSAFVVLKRMHDTGCEP 705
Query: 219 QDDTCGCMLKAL--SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++K L K G+VK E G+ V S+ F + V
Sbjct: 706 SQHTFLSLIKHLLEMKYGKVKGG--------EPGVCVM-SNMMEF----------DIVVE 746
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG------LLLDSF--CC 328
LL +VE G P A + + C G + E++ + K L+ ++ CC
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCC 806
Query: 329 SSLMEYYCSNRQIDKAIA----------------LHIKIEKLKGS------LDVATYD-- 364
L ++ + + +D I L+ K EK +G+ L YD
Sbjct: 807 CKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDE 866
Query: 365 ----VLLDGLFKDGRMEEAVRIFDYMKE 388
+++DG+ K G +E +F+ M++
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 70/393 (17%), Positives = 155/393 (39%), Gaps = 25/393 (6%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+ S E +D + + + ++D Y G + + M +P NAL+ L
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSV- 113
+++ A+ L MV+ + P T +++ L + G F+ +L SG
Sbjct: 579 TDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAH 638
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y I Y ++G A D + +M ++P TYSS++ G +T + ++
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKM-KENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR 697
Query: 174 MVEKKLLP---------KHFLS-------GNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
M + P KH L G + + +S+M + + ++ + +
Sbjct: 698 MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVT 757
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ + + G ++ A +++ H+ + GI+ + + A ++ CK + E
Sbjct: 758 PNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAK 817
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++ D++ G++P + KG+ + + +L G D +++
Sbjct: 818 VVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVG 877
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++ L +EK + TY +L++G
Sbjct: 878 KQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 193/464 (41%), Gaps = 44/464 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L+ G F + + V M G CN +L+A+ Q + A L +
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAA 131
G + +++ V + LC + ++ V L+D + + V +N +I + + G F
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L +M + TP Y++I+DG + EV++ I+ M L P + + V
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN--VVCYNTV 327
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
++ L + AE + + L D T ++ + G V I++ + G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N CKE +E LL+ + G P + + + C G+W + EE
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+S ++ +G + ++L+ + C +++AI L ++ S D+ +Y ++DGL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 372 KDGRMEEA-----------------------------------VRIFDYMKELKVVSSSS 396
K G+ EEA +++FD +K+ + S +
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 397 -FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V+S LC E +A+ M+ G P+E+TY +I G
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M +G +P V +++ ++ I A L +M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
G PN ++++V + LC +G++ E++ ++ G + V +N +I+F KKG
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KTE + ++ +MV K + P +
Sbjct: 478 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII-- 533
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ AC ALS+EGRV + IQ++ I
Sbjct: 534 --------------YSS-----IAC----------------ALSREGRVNKVIQMFDNIK 558
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + + +V G +P + + +G K
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618
Query: 308 EVEELLSAVLDKGLL 322
E +ELLS + +G L
Sbjct: 619 EAQELLSELCSRGAL 633
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
++ V LC + + +L ++ +G P + + C G ++ +L A+
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG LD+ C+ ++ C +D+A+ L K+ D+ +Y+ +L GL R
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + D M + + +F ++ LC + + +M + G PD Y +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 437 SGF 439
G
Sbjct: 294 DGI 296
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 181/409 (44%), Gaps = 46/409 (11%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
+M + G+ P V + + +++ R E+ L M R G+ PN + + + +LCR
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 97 KF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K E ++ GI +V+Y +ID + K+GD AA EM + R++TP TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTY 389
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++I+ G + +G MVE KL + F G
Sbjct: 390 TAIISGFCQ----------IGDMVEAGKLFHEMFCKG----------------------- 416
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+E T ++ K G +K+A ++++ + + G + Y ++ LCKE
Sbjct: 417 -----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LL ++ + G P + V C G +E +L+ GL D+ ++
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
LM+ YC + ++DKA + ++ + T++VL++G G +E+ ++ ++M
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 391 VV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++++F +V + C L+ A + +M G PD TY+ ++ G
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 178/422 (42%), Gaps = 12/422 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ-NEIRLASCLYGAMVRDGVSPNKFT 84
GL + V+ M YG V +V +CN L L + + A ++ GV N +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 85 WSLVAQILCRSGKFEV---VLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++V +C+ G+ + +L L++ Y+ + Y+ V++ Y + G+ + +L E+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW-KLIEVM 307
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ L P Y SI+ R K ++ M+ + +LP + +I G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT--LIDGFCKRG 365
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA F I T ++ + G + EA +++H + +G+ +
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N CK ++ + +++ G P + + + C +G ELL +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL + F +S++ C + I++A+ L + E + D TY L+D K G M++A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 380 VRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
I M K L+ + +F ++++ C L K + ML G P+ T+ ++
Sbjct: 546 QEILKEMLGKGLQ-PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 438 GF 439
+
Sbjct: 605 QY 606
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 9/306 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + S + +++ Y G D V+ M G P V L+D L ++ ++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVI 119
A+ L M + G+ PN FT++ + LC+SG E + L+ +G+ + +V Y ++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D Y K G+ A + L EM G+ L P T++ +++G + E ++++ M+ K +
Sbjct: 534 DAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + ++++ AA I+K C + T ++K K +KEA
Sbjct: 593 APNA--TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + +G +V S Y + K + E + D + R + E+ F +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF-DQMRREGLAADKEIFDFFSD 709
Query: 300 QCGKGK 305
KGK
Sbjct: 710 TKYKGK 715
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG-RVKEAIQIYHLIS 247
D Q L D G A +F++ + + L D+C L LSK+ + AI ++
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 238
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E G+ + Y ++ +C+ + +E LL + +GY P + S V C G+
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+V +L+ + KGL +S+ S++ C ++ +A ++ + D Y L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG K G + A + F M + ++ ++S C + ++ +A K EM G +
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 427 PDEATYKQVISGF 439
PD T+ ++I+G+
Sbjct: 419 PDSVTFTELINGY 431
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 144/381 (37%), Gaps = 51/381 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D + +G + + M P V A++ + ++ A L+ M
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ P+ T++ + C++G F V ++ +G +V+ Y +ID K+GD +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L+EM L P TY+SI++G + E + ++VG L + +
Sbjct: 475 ANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL------NADTV 527
Query: 191 VIQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L D G+ A+ I K + ++ T ++ G +++ ++ + +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+GI + + + V C + + + +D+ RG P V C
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
KE L + KG S+ V+TY VL
Sbjct: 648 KEAWFLFQEMKGKGF-----------------------------------SVSVSTYSVL 672
Query: 367 LDGLFKDGRMEEAVRIFDYMK 387
+ G K + EA +FD M+
Sbjct: 673 IKGFLKRKKFLEAREVFDQMR 693
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 193/464 (41%), Gaps = 44/464 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L+ G F + + V M G CN +L+A+ Q + A L +
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAA 131
G + +++ V + LC + ++ V L+D + + V +N +I + + G F
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L +M + TP Y++I+DG + EV++ I+ M L P + + V
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN--VVCYNTV 327
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
++ L + AE + + L D T ++ + G V I++ + G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N CKE +E LL+ + G P + + + C G+W + EE
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+S ++ +G + ++L+ + C +++AI L ++ S D+ +Y ++DGL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 372 KDGRMEEA-----------------------------------VRIFDYMKELKVVSSSS 396
K G+ EEA +++FD +K+ + S +
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 397 -FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V+S LC E +A+ M+ G P+E+TY +I G
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M +G +P V +++ ++ I A L +M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
G PN ++++V + LC +G++ E++ ++ G + V +N +I+F KKG
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KTE + ++ +MV K + P +
Sbjct: 478 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII-- 533
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ AC ALS+EGRV + IQ++ I
Sbjct: 534 --------------YSS-----IAC----------------ALSREGRVNKVIQMFDNIK 558
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + + +V G +P + + +G K
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618
Query: 308 EVEELLSAVLDKGLL 322
E +ELLS + +G L
Sbjct: 619 EAQELLSELCSRGAL 633
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
++ V LC + + +L ++ +G P + + C G ++ +L A+
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG LD+ C+ ++ C +D+A+ L K+ D+ +Y+ +L GL R
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + D M + + +F ++ LC + + +M + G PD Y +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 437 SGF 439
G
Sbjct: 294 DGI 296
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 193/464 (41%), Gaps = 44/464 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L+ G F + + V M G CN +L+A+ Q + A L +
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAA 131
G + +++ V + LC + ++ V L+D + + V +N +I + + G F
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L +M + TP Y++I+DG + EV++ I+ M L P + + V
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN--VVCYNTV 327
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
++ L + AE + + L D T ++ + G V I++ + G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N CKE +E LL+ + G P + + + C G+W + EE
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+S ++ +G + ++L+ + C +++AI L ++ S D+ +Y ++DGL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 372 KDGRMEEA-----------------------------------VRIFDYMKELKVVSSSS 396
K G+ EEA +++FD +K+ + S +
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 397 -FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V+S LC E +A+ M+ G P+E+TY +I G
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M +G +P V +++ ++ I A L +M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
G PN ++++V + LC +G++ E++ ++ G + V +N +I+F KKG
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KTE + ++ +MV K + P +
Sbjct: 478 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII-- 533
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ AC ALS+EGRV + IQ++ I
Sbjct: 534 --------------YSS-----IAC----------------ALSREGRVNKVIQMFDNIK 558
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + + +V G +P + + +G K
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618
Query: 308 EVEELLSAVLDKGLL 322
E +ELLS + +G L
Sbjct: 619 EAQELLSELCSRGAL 633
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
++ V LC + + +L ++ +G P + + C G ++ +L A+
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG LD+ C+ ++ C +D+A+ L K+ D+ +Y+ +L GL R
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + D M + + +F ++ LC + + +M + G PD Y +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 437 SGF 439
G
Sbjct: 294 DGI 296
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 193/464 (41%), Gaps = 44/464 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L+ G F + + V M G CN +L+A+ Q + A L +
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAA 131
G + +++ V + LC + ++ V L+D + + V +N +I + + G F
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L +M + TP Y++I+DG + EV++ I+ M L P + + V
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN--VVCYNTV 327
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
++ L + AE + + L D T ++ + G V I++ + G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N CKE +E LL+ + G P + + + C G+W + EE
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+S ++ +G + ++L+ + C +++AI L ++ S D+ +Y ++DGL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 372 KDGRMEEA-----------------------------------VRIFDYMKELKVVSSSS 396
K G+ EEA +++FD +K+ + S +
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 397 -FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V+S LC E +A+ M+ G P+E+TY +I G
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M +G +P V +++ ++ I A L +M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
G PN ++++V + LC +G++ E++ ++ G + V +N +I+F KKG
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KTE + ++ +MV K + P +
Sbjct: 478 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII-- 533
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ AC ALS+EGRV + IQ++ I
Sbjct: 534 --------------YSS-----IAC----------------ALSREGRVNKVIQMFDNIK 558
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + + +V G +P + + +G K
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAK 618
Query: 308 EVEELLSAVLDKGLL 322
E +ELLS + +G L
Sbjct: 619 EAQELLSELCSRGAL 633
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
++ V LC + + +L ++ +G P + + C G ++ +L A+
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG LD+ C+ ++ C +D+A+ L K+ D+ +Y+ +L GL R
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + D M + + +F ++ LC + + +M + G PD Y +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 437 SGF 439
G
Sbjct: 294 DGI 296
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 207/465 (44%), Gaps = 52/465 (11%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL--YGAMV 74
L+ Y+ +F + LE + M GF +C L AL R ++ SCL + MV
Sbjct: 164 LLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVD--SCLRFFRRMV 221
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFG 129
V ++ ++V LC+ G E+ L+D G+ ++V+ YN I+ Y K+ D G
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 130 AAFDRLNEM------CNGRNLT---PGFSTYSSILDGARRYEKTE---------VSDRIV 171
+ L M CN T GFS I + R +E+ V I+
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 172 GL----------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
M +K L+P G +I + G+ AA+M+ +
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG--ALIHGVCKAGQMEAAQMLVNEMQGKG 399
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV---LCKEHQPE 272
I+L ++ + G V EA+++ ++ ++G+ +SD +A+ ++ LCK ++ +
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL---ESDVFAYNSIASGLCKLNRKD 456
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E GLL +VERG P M + + C +G + E + + + +KG + + + L+
Sbjct: 457 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 516
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ Y + +A L ++E DV T L+ G DG+++ A+++FD M + +V
Sbjct: 517 DGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV 576
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ ++S L +A K +DEM + G PD+ Y ++
Sbjct: 577 PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 154/378 (40%), Gaps = 78/378 (20%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L++ +S+ G + ++ MR G V +++ R ++ A L+ M
Sbjct: 303 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 362
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGA 130
G+ P+ T+ + +C++G+ E L++ GI + V++N +ID Y + G
Sbjct: 363 KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 422
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A RL + + L Y+SI G + + + + ++ MVE+ + P
Sbjct: 423 AL-RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN-------- 473
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
M F L D C KEG EA +++
Sbjct: 474 --------------TMSF-------TTLIDIYC--------KEGNFVEAKRVF------- 497
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
R++ E+G +P + + + +G KE
Sbjct: 498 ----------------------------REMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L + ++GL+ D + C+SL+ C + ++D A+ L ++ + +V TY ++ GL
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 589
Query: 371 FKDGRMEEAVRIFDYMKE 388
KDGR EEA +++D MKE
Sbjct: 590 SKDGRSEEAFKLYDEMKE 607
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++D Y G+ + L + +M G V A N++ L + N
Sbjct: 398 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 457
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVID 120
A L +MV GVSPN +++ + I C+ G F V + + G + + + YN++ID
Sbjct: 458 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 517
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
YSK+G+ A +E+ N R L P T +S++ G K +++ ++ M ++ L+
Sbjct: 518 GYSKRGNMKEAHKLKDELEN-RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV 576
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P TY A M+ LSK+GR +EA
Sbjct: 577 PNVV----------------TYTA---------------------MISGLSKDGRSEEAF 599
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
++Y + E G+T D+ Y + V L H +E
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLVGSL---HSADE 629
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA++ + + ++G + + ++ L + Q + R +V L+ +
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 236
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C +G + +L+ V KG+ + ++ +E Y + + +EK +
Sbjct: 237 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 296
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMK 415
+V TY +L+ G G++EEA R+F+ M+E K + + +V ++S C +++A+
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE-KGIEADVYVYTSIISCNCRSGNVKRALV 355
Query: 416 NHDEMLKMGHKPDEATYKQVISG 438
DEM G P TY +I G
Sbjct: 356 LFDEMTDKGLIPSAHTYGALIHG 378
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 192/435 (44%), Gaps = 16/435 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S +++ Y+ KG+ +EV R M +P V LLD +R + A+ Y M
Sbjct: 413 TFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEM 472
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
G+ N + ++ L RSG + ++ +L GIY V Y+ ++D Y K+G+
Sbjct: 473 KSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNE 532
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG- 187
AA + EM +++ Y+++ G R K E + M+E L P
Sbjct: 533 SAALSVVQEMTE-KDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNS 590
Query: 188 --NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
N Y IQ GKT A + + T ++ L K G +++ I + H
Sbjct: 591 VMNTYFIQ-----GKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHE 645
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G + + + + + + + + +V+ G M + + C G
Sbjct: 646 MLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGM 705
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
K+ +L+ ++ KG+ D ++L+ YC+ ++KA + ++ S ++ TY+
Sbjct: 706 TKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNA 765
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
LL+GL +G M +A ++ M+E +V +++++ I+VS + R ++K + EM+ G
Sbjct: 766 LLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKG 825
Query: 425 HKPDEATYKQVISGF 439
P TY +I +
Sbjct: 826 FIPTTGTYNVLIQDY 840
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 179/424 (42%), Gaps = 25/424 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR VP++ N LL + LY MV GV PN F+ +L+ LC+ G
Sbjct: 1 MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ LG L + ++ V YN V+ + K+G F L+EM + + T + ++ G
Sbjct: 61 LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVK-KGVCFDSVTCNILVKG 119
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + ++ I+G +V +P + G + ++ ++G A + + ++
Sbjct: 120 YCQIGLVQYAEWIMGNLVGGG-VPLDAI-GLNTLVDGYCEVGLVSRALDLVEDGWKNGVK 177
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYH------------LISERGITVRDS--------- 256
T ++ A K G + +A + + ++++ G+ D
Sbjct: 178 PDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVV 237
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ + CK ++ L ++ G +P + S + C GK E LL +
Sbjct: 238 TWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREM 297
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ GL + ++++ + ++ +A ++ S+D+ ++DGLFK G+
Sbjct: 298 YNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKS 357
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+EA +F + +L +V + ++ ++ C + ++ A +M K P+ T+ +
Sbjct: 358 KEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSI 417
Query: 436 ISGF 439
I+G+
Sbjct: 418 INGY 421
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 173/417 (41%), Gaps = 28/417 (6%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG 108
CN L+ + ++ A + G +V GV + + + C G L L++ G
Sbjct: 112 TCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDG 171
Query: 109 IYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGR--------------------N 143
+ V YN +++ + K+GD A +NE+ R +
Sbjct: 172 WKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRD 231
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L P T+++++ ++ + + M+ ++P + ++ L GK
Sbjct: 232 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSS--ILYGLCRHGKLTE 289
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A M+ + + ++ + ++ AL K GRV EA + RGI++ ++
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMD 349
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
L K + +E + + +++ +P + + + C G + E +L + + +L
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ SS++ Y ++KA+ + K+ ++ +V Y +LLDG F+ G+ E A +
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK + ++ F I+++ L +++A ++L G D Y ++ G+
Sbjct: 470 KEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGY 526
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 186/444 (41%), Gaps = 37/444 (8%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+A SL+ D S KG+++D V+ + ++L+D +++ A +
Sbjct: 499 EAQSLIKDILS-KGIYLD---------VFNY-------SSLMDGYFKEGNESAALSVVQE 541
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
M + + ++ + + L R GK+E V +++ G+ V YN V++ Y +G
Sbjct: 542 MTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKT 601
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D LNEM + P TY+ ++ G + E ++ M+ +P + +
Sbjct: 602 ENALDLLNEM-KSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPII--H 658
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++++ S K A I K+ D + L ++ L + G K+A + +
Sbjct: 659 KFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVI 718
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI+ Y A + C E+ ++ G P + + G ++
Sbjct: 719 KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRD 778
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++L+S + ++GL+ ++ + L+ + +I L+ ++ TY+VL+
Sbjct: 779 ADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQ 838
Query: 369 GLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVV------------SRLCHLKELRKAMK 415
K G+M +A + + M ++ +SS++ +++ RL L +A K
Sbjct: 839 DYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKK 898
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
EM + GH P E+T + S F
Sbjct: 899 LLREMCEKGHVPSESTLMYISSNF 922
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 30/308 (9%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ V M G+VP LL A R + ++ +V G++ N+ ++ + +
Sbjct: 640 ISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITV 699
Query: 92 LCRSG---KFEVVLG-LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LCR G K VVL ++ GI + V YN +I Y AF+ ++M ++P
Sbjct: 700 LCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVS-GISP 758
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSGNDYVIQKLSDMGKT 201
+TY+++L+G +D++V M E+ L+P +SG+ V K D K
Sbjct: 759 NITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNK-RDSIKL 817
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y EMI K T +++ +K G++++A ++ + + RG S Y
Sbjct: 818 YC-EMITKGFIP-----TTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVL 871
Query: 262 VNVLCKEH-QPE-----------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ CK QPE E LLR++ E+G++P L ++ GK +
Sbjct: 872 ICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDA 931
Query: 310 EELLSAVL 317
+ LL V+
Sbjct: 932 KRLLKTVI 939
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 184/410 (44%), Gaps = 48/410 (11%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
+M + G+ P V + + +++ R E+ L M + G+ PN +T+ + +LCR
Sbjct: 694 LMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC 753
Query: 97 KF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K E ++ GI +++Y ++D + K+GD AA EM + R++TP TY
Sbjct: 754 KLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTY 812
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++I+ G + +G MVE A ++ +
Sbjct: 813 TAIISGFCQ----------IGDMVE--------------------------AGKLFHEML 836
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
C +E T ++ K G +K+A ++++ + + G + Y ++ LCKE
Sbjct: 837 C-RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ LL ++ + G P + V C G +E +L+ GL D+ ++L
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLD--VATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
M+ YC + ++DKA I E L L + T++VL++G G +E+ ++ ++M
Sbjct: 956 MDAYCKSGEMDKA--QEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1013
Query: 390 KVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++++F +V + C L+ A + +M G +PD TY+ ++ G
Sbjct: 1014 GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 179/416 (43%), Gaps = 35/416 (8%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ-NEIRLASCLYGAMVRDGVSPNKFT 84
G+ + +V+ M YG V +V +CN L L + N+ A ++ GV N +
Sbjct: 612 GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVAS 671
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+++V +C+ G+ LL L+++ +
Sbjct: 672 YNIVIHFVCQLGRINEAHHLL-----------LLMEL--------------------KGY 700
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TP +YS++++G R+ + + +++ M +K L P + G+ +I L + K A
Sbjct: 701 TPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGS--IIGLLCRICKLAEA 758
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E F + I ++ K G ++ A + ++ + R IT Y A ++
Sbjct: 759 EEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 818
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C+ E L +++ RG P + + + C G K+ + + ++ G +
Sbjct: 819 FCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPN 878
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L++ C +D A L ++ K+ ++ TY+ +++GL K G +EEAV++
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + + ++ ++ C E+ KA + EML G +P T+ +++GF
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 135/306 (44%), Gaps = 9/306 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C G + + +++ Y G D V+ M G P V L+D L ++ ++
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVI 119
A+ L M + G+ PN FT++ + LC+SG E + L+ +G+ + +V Y ++
Sbjct: 897 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D Y K G+ A + L EM G+ L P T++ +++G + E ++++ M+ K +
Sbjct: 957 DAYCKSGEMDKAQEILTEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + ++++ AA I+K C +E T ++K +KEA
Sbjct: 1016 APN--ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEA 1073
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + +G +V S Y + K + E + D + R + E+ F +
Sbjct: 1074 WFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIF-DQMRRDGLAADKEIFDFFSD 1132
Query: 300 QCGKGK 305
KGK
Sbjct: 1133 TKYKGK 1138
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 43/291 (14%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE--------------- 233
D Q L + G A +F++ + + L D+C L LSK+
Sbjct: 602 DVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFP 661
Query: 234 ---------------------GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
GR+ EA + L+ +G T Y +N C+ + +
Sbjct: 662 EVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELD 721
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+V L+ + ++G P + + C K E EE S ++ +G+L D+ ++L+
Sbjct: 722 KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLV 781
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM----KE 388
+ +C I A ++ + DV TY ++ G + G M EA ++F M E
Sbjct: 782 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE 841
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +F +++ C ++ A + H+ M++ G P+ TY +I G
Sbjct: 842 PDII---TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 144/381 (37%), Gaps = 51/381 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D + +G + + M P V A++ + ++ A L+ M+
Sbjct: 778 TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC 837
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ P+ T++ + C++G F V ++ +G +V+ Y +ID K+GD +
Sbjct: 838 RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L+EM L P TY+SI++G + E + ++VG L + +
Sbjct: 898 ANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL------NADTV 950
Query: 191 VIQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L D G+ A+ I + ++ T ++ G +++ ++ + +
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+GI + + V C + + + +D+ RG P V C
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
KE L + KG S+ V+TY VL
Sbjct: 1071 KEAWFLFQEMKGKGF-----------------------------------SVSVSTYSVL 1095
Query: 367 LDGLFKDGRMEEAVRIFDYMK 387
+ G FK + EA IFD M+
Sbjct: 1096 IKGFFKRKKFVEAREIFDQMR 1116
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 199/438 (45%), Gaps = 8/438 (1%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + +L++D Y E+ M+ P+ + L+ L ++++ A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
+ + M+R+GV PN F + + + + ++E+ + LL I + V+ YN +I
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ A L +M + + P TY + ++ + + +V++R M+ ++P
Sbjct: 531 LCRAKKVEEAKMLLVDM-GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +I+ D+G T A FK ++ + ++ +LSK G+ KEA+
Sbjct: 590 NNVIY--TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + G+ Y + ++ CKE E+ L +++ G P + + + C
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ + EL + +K L+ D S++++ YC + + +A L ++ S D
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
Y +L+DG K+G +E+A+ +F ++ V S S+F ++ C ++ +A + D+M+
Sbjct: 768 IYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMV 827
Query: 422 KMGHKPDEATYKQVISGF 439
P+ TY +I +
Sbjct: 828 DKKLTPNIVTYTILIDAY 845
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 172/387 (44%), Gaps = 9/387 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A S ++ S G + + V+ G VP V N+L+ ++ +I AS LY M
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDF 128
+ +G++PN ++ + LC+ G+ L D + V Y+ +ID Y K G+
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF +EM + + ++P Y ++DG + E + + L E + LS
Sbjct: 748 TEAFKLFDEMIS-KGISPDGYIYCILIDGCGKEGNLE---KALSLFHEAQQKSVGSLSAF 803
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK A +F D+K+ T ++ A K ++EA Q++ +
Sbjct: 804 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 863
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
R I Y + + + ++ L +D+ RG A+ ++ C +GK E
Sbjct: 864 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+LL+ L +G+ L+ +L+ + C +QI + L ++ K + SL T + LL
Sbjct: 924 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS 395
G +K G +EA ++ M+ L V +S
Sbjct: 984 GFYKSGNEDEASKVLGVMQRLGWVPTS 1010
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 187/435 (42%), Gaps = 10/435 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + +D + G + V+ GF P + CN L+ L + N + L +
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSG---KFEVVLGLLDSGIYSSVM-YNLVIDFYSKK 125
YG+MV + P+ +T++ V + C+ G K ++VL ++ ++ YN I +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQT 289
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A + + ++ + L P TY+ ++DG + ++++ + I M L P F
Sbjct: 290 GAVDEALE-VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I G A I ++L T M+ ++K G + +A+ +++
Sbjct: 349 Y--TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G+ Y ++ K H + C LL ++ R P S ++ C
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYD 364
++ E+L ++ G+ + F +L++ Y + + AI L +KI G L D+ Y+
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL-LKIMIANGVLPDLFCYN 525
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ GL + ++EEA + M E + ++ ++ ++ E++ A + +ML
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585
Query: 424 GHKPDEATYKQVISG 438
G P+ Y +I G
Sbjct: 586 GIVPNNVIYTILIKG 600
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF---KRACDEKIELQDDTCGC 225
++ G MVE K++P + N VI+ +G +M+ ++ C + T
Sbjct: 228 KVYGSMVEAKIVPDVYTYTN--VIKAHCKVGDVIKGKMVLSEMEKECKPNLF----TYNA 281
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ L + G V EA+++ L+ E+G+ Y V+ CK+ + +E + + G
Sbjct: 282 FIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG 341
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + +G +E + ++ +GL L+ ++++ ++ KA+
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
+L ++ D TY++L+DG K M +A + MK K+ S ++ +++S L
Sbjct: 402 SLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
CH +L+KA + D+M++ G KP+ Y +I ++
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 122/294 (41%), Gaps = 38/294 (12%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
VP V + ++D + + A L+ M+ G+SP+ + + ++ + G E L
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 103 GLLDSGIYSSV----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L SV +N +ID + K G A + ++M + + LTP TY+ ++D
Sbjct: 787 SLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD-KKLTPNIVTYTILIDAY 845
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHF------LS----GNDY-VIQKLSDM--------- 198
+ E E ++++ M + ++P LS GN + +I DM
Sbjct: 846 GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 905
Query: 199 -------------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
GK+ A + ++ E I+L+DD ++ L KE ++ +++
Sbjct: 906 IAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSE 965
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + +++ + K +E +L + G++P ++ L+ +++
Sbjct: 966 MGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1019
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 185/405 (45%), Gaps = 9/405 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P + N L+ L+ + ++ A L MV +G P+ T++ + +CRSG +
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL + + + V Y+ +ID + G AA EM + + TY+S++
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVR 261
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K ++ MV ++++P + ++ N ++ GK A ++K I
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVP-NVITFN-VLLDVFVKEGKLQEANELYKEMITRGI 319
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + R+ EA + L+ + + + + C + ++
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 379
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ R++ +RG + A+ S V C GK K EEL ++ G+L D L++ C
Sbjct: 380 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 439
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
N +++KA+ + ++K K L + Y +++G+ K G++E+A +F + V +
Sbjct: 440 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 499
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ +++S LC L +A +M + G+ P++ TY +I +
Sbjct: 500 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 176/380 (46%), Gaps = 9/380 (2%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVID 120
A L+ M+R P+ +S + R+ +F +VL +GI ++ N++I+
Sbjct: 62 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A+ L ++ P +T+++++ G K + +V MVE
Sbjct: 122 CFCRCCKTCFAYSVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ + G T A + ++ + ++ T ++ +L ++G + AI
Sbjct: 181 PD--VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + +GI Y + V LCK + + LL+D+V R +P + + +
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+GK +E EL ++ +G+ + ++LM+ YC ++ +A + + + K S D+
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T+ L+ G R+++ +++F + + +V+++ ++ I+V C +++ A + E
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G PD TY ++ G
Sbjct: 419 MVSHGVLPDVMTYGILLDGL 438
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 182/428 (42%), Gaps = 60/428 (14%)
Query: 25 KGLFMDG------LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
KGLF++G + V RM+ G P V N++++ + R + LA L M V
Sbjct: 156 KGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 214
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFD 133
+ FT+S + LCR G + + L GI SSV+ YN ++ K G +
Sbjct: 215 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 274
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND---- 189
L +M + R + P T++ +LD + K + ++ + M+ + + P + ++ N
Sbjct: 275 LLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP-NIITYNTLMDG 332
Query: 190 YVIQ-KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
Y +Q +LS+ +++ + C I T ++K RV + ++++ IS+
Sbjct: 333 YCMQNRLSEANNML--DLMVRNKCSPDIV----TFTSLIKGYCMVKRVDDGMKVFRNISK 386
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ Y V C+ + + L +++V G +P M + C GK ++
Sbjct: 387 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446
Query: 309 V----EELLSAVLDKGLLL------------------DSFCC-------SSLMEYY---- 335
E+L + +D G+++ + FC ++M Y
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506
Query: 336 --CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + +A L K+E+ + + TY+ L+ +DG + + ++ + MK +
Sbjct: 507 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 566
Query: 394 SSSFVIVV 401
+S + +V
Sbjct: 567 DASSIKMV 574
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/378 (18%), Positives = 164/378 (43%), Gaps = 10/378 (2%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ E R+ ++D S ++D G + +++ M G +V N+L+ L
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM 114
+ + + L MV + PN T++++ + + GK E+ ++ GI +++
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++D Y + A + L+ M + +P T++S++ G ++ + ++
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 383
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ ++ L+ ++Q GK AE +F+ + T G +L L
Sbjct: 384 ISKRGLVANAVTYS--ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G++++A++I+ + + + + Y + +CK + E+ L + +G P M
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ ++ C KG E LL + + G + ++L+ + + + + L +++
Sbjct: 502 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561
Query: 354 LKGSLDVATYDVLLDGLF 371
S D ++ +++D L
Sbjct: 562 CGFSADASSIKMVIDMLL 579
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ L ++++ +P ++ SRF ++ ++ V + + G+ + + +
Sbjct: 58 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE- 388
++ +C + A ++ K+ KL D T++ L+ GLF +G++ EAV + D M E
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 389 ---LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
VV+ +S +V+ +C + A+ +M + K D TY +I
Sbjct: 178 GCQPDVVTYNS---IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 225
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 195/440 (44%), Gaps = 27/440 (6%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L +++D Y G D EV MMR G P++ CNALL L R + + L + MV
Sbjct: 50 LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMV 109
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
G+SP+ +T+S + + C+ +F+ V++ + + G ++V YN++I + G
Sbjct: 110 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 169
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF +M L P TY ++++G + ++ + ++ M +L P + N
Sbjct: 170 EAFGFKKDM-EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN- 227
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A + K ++ T +++ L K G++ A + +
Sbjct: 228 -LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM--- 283
Query: 250 GITVRDS------DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
VRDS Y + + H ++ LL ++ G P S + C
Sbjct: 284 ---VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 340
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ ++ +LL + KGL ++F + L+ YC + A + K+ K+ D+ Y
Sbjct: 341 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 400
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH--LK--ELRKAMKNHDE 419
+ L+ GL K GR+EE+ + F M+E ++ + S L H LK +L A +
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNE---FTYSGLIHGYLKNGDLESAEQLVQR 457
Query: 420 MLKMGHKPDEATYKQVISGF 439
ML G KP++ Y ++ +
Sbjct: 458 MLDTGLKPNDVIYIDLLESY 477
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 189/436 (43%), Gaps = 45/436 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N +++ +R + + A L M G+SPN +T+S++ LC+SG+ E L
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349
Query: 105 LDSGIY-----SSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILD 156
L+ ++ +Y +I Y ++G+ A FD++ ++ N+ P Y+S++
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV----NVLPDLYCYNSLIF 405
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHF--------------LSGNDYVIQKLSDMG--- 199
G + + E S + M E+ LLP F L + ++Q++ D G
Sbjct: 406 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 465
Query: 200 ---------KTY-------AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++Y FK D+ + L + G ++ LS G ++ A ++
Sbjct: 466 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 525
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
I + G Y + ++ LCK E+ G+L ++ ++G P + + + C
Sbjct: 526 SEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 585
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G + +++L KGL+ + +SL++ C I A L+ ++ + D Y
Sbjct: 586 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 645
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
VL G G +E+A+ + + M S SSF +V C ++++ +K ++
Sbjct: 646 SVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 705
Query: 424 GHKPDEATYKQVISGF 439
G P+ T + +ISG
Sbjct: 706 GLVPNALTIENIISGL 721
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 145/345 (42%), Gaps = 18/345 (5%)
Query: 103 GLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
L DSG S + ++++D Y K G A + + M R L P +++L R +
Sbjct: 38 ALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVV-LMMRDRGLAPSIRCCNALLKDLLRAD 96
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ ++ MV + P + S + + Y F A +E+++
Sbjct: 97 AMALLWKVREFMVGAGISPD---------VYTYSTLIEAYCKVREFDTAKKVLVEMRERG 147
Query: 223 CG-------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
CG ++ L + G V+EA + + G+ Y A +N LCK + E
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 207
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ P + + + +G E +++ ++ G+ + +L+
Sbjct: 208 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 267
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C Q+D+A L ++ + D TY+++++G F+ ++A R+ M+ + +
Sbjct: 268 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNV 327
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC E KA +EM G KP+ Y +ISG+
Sbjct: 328 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 26/258 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ + G VP +L+D + +I A LY M+ G++P+ F +S++
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652
Query: 93 CRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+G E + L++ G S +N ++D + K+G +L + GR L P
Sbjct: 653 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETL-KLLHVIMGRGLVPNA 711
Query: 149 STYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
T +I+ G K +EV V L QK S+ + + +
Sbjct: 712 LTIENIISGLSEAGKLSEVHTIFVELQ------------------QKTSESAARHFSSLF 753
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
KI L D M++ KEG + +A+ + +I + + S Y A V+ LC+
Sbjct: 754 MDMINQGKIPL--DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 811
Query: 268 EHQPEEVCGLLRDVVERG 285
+ + E LL+++ +RG
Sbjct: 812 KGKLSEALNLLKEMDKRG 829
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 145/371 (39%), Gaps = 71/371 (19%)
Query: 39 RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF 98
R+YG + + + ++A +R + + ++G P+ +S + LC++
Sbjct: 503 RIYGILIHNLSSSGNMEAAFR---------VLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 99 EVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
E G+LD G+ +++ YN +ID K GD A + N + + L P TY+S
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL-AKGLVPNCVTYTS 612
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++DG+ + + + M+ + P F+ Y +
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFV----YSVL-------------------- 648
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
T GC S G +++A+ + + RG S + V+ CK + +E
Sbjct: 649 --------TTGC-----SSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 694
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK----------GLLL 323
LL ++ RG +P A+ + ++ GK EV + + K L +
Sbjct: 695 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 754
Query: 324 DSF--------CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
D ++ +C +DKA+ L I + ++Y ++D L + G+
Sbjct: 755 DMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK 814
Query: 376 MEEAVRIFDYM 386
+ EA+ + M
Sbjct: 815 LSEALNLLKEM 825
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 177/417 (42%), Gaps = 32/417 (7%)
Query: 35 YRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
+ M+ G +P + L+ + ++ A L M+ G+ PN + + + +
Sbjct: 420 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 479
Query: 95 SGKFEVVLG----LLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGF 148
S E V +LD G+ + +Y ++I S G+ AAF L+E+ NG P
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGS--VPDV 537
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
YSS++ G + E + I+ M +K + P + + +I L G A +F
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPN--IVCYNALIDGLCKSGDISYARNVF 595
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ + T ++ K G + A +Y+ + GIT D+ Y+ + C
Sbjct: 596 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT-PDAFVYSVLTTGCSS 654
Query: 269 HQP-EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E+ L+ ++ RG+ + + V C +GK +E +LL ++ +GL+ ++
Sbjct: 655 AGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 713
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKL------------------KGSLDVATYDVLLDG 369
+++ ++ + + +++++ +G + + D ++
Sbjct: 714 IENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRD 773
Query: 370 LFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
K+G +++A+ + D + + + SS++ +V LC +L +A+ EM K G+
Sbjct: 774 HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGN 830
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 273 EVCGLLRDVVERGYIP----CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
EV ++RD RG P C L + + WK E ++ A G+ D +
Sbjct: 68 EVVLMMRD---RGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA----GISPDVYTY 120
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
S+L+E YC R+ D A + +++ + L+ TY+VL+ GL + G +EEA F + K+
Sbjct: 121 STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA---FGFKKD 177
Query: 389 LK----VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ V ++ +++ LC + +A DEM KP+ Y +I GFM
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 233
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 206/435 (47%), Gaps = 29/435 (6%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD--GVSP 80
S +G ++ + ++ P+V CNALL+AL R + A+C +RD V+P
Sbjct: 169 SARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLG-ATCKVFDEMRDCKTVTP 227
Query: 81 NKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS---VMYNLVIDFYSKKGDFGAAFD 133
N ++++ + + LC+ GK F+++ L+ +G+ S V YNL++D K G A
Sbjct: 228 NGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAI- 286
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI--VGLMVEKKLLPKHFLSGNDYV 191
RL + P T+ +++G +R SDR VG ++ + + ++ N+ +
Sbjct: 287 RLKGRMEESRVAPSMVTFGILINGLKR------SDRFGEVGALLRE--MEGLGITPNEVI 338
Query: 192 IQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+L D G A +F ++++ T + +AL KEG ++ A +I +
Sbjct: 339 CNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEML 398
Query: 248 ERGITVRDSDYYAFV-NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G+T+ + + V +L + + E V L+ ++V+RG P ++ C +
Sbjct: 399 STGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRH 458
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+E + +L+KGL ++ ++L+ C + + A + + LD TY+++
Sbjct: 459 QEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIM 518
Query: 367 LDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+ G KD ++EEA+++ D M K K + F ++ C L ++ +A+ +M G
Sbjct: 519 IQGCCKDSKIEEALKLRDDMIRKGFK-PDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEG 577
Query: 425 HKPDEATYKQVISGF 439
+PD +Y +I G+
Sbjct: 578 VQPDVVSYGTIIDGY 592
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 198/472 (41%), Gaps = 67/472 (14%)
Query: 26 GLFMDGLE----------VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
G+ ++GL+ + R M G P CN L+D R+ A L+ MV
Sbjct: 305 GILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVS 364
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG--IYSSVMYNLVIDFYSKKGDFG 129
+ T++L+A+ LC+ G+ E ++ +L +G I+S + ++V + G
Sbjct: 365 KEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLE 424
Query: 130 AAFDRLNEMCNGRNLTPG---FSTYSSILDGARRYEKTEVSDRIVGL---MVEKKLLPKH 183
+ ++EM R + P + + L RR+++ VG+ M+EK L
Sbjct: 425 SVVRLISEMVK-RGMKPNDALMTACTKQLCQGRRHQEA------VGIWLKMLEKGLCIN- 476
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++ ++ +I L + A + + ++ +EL + T M++ K+ +++EA+++
Sbjct: 477 -IATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ +G + + ++ C + EE LL + G P + + C
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKA 595
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--------- 354
++ E L+ ++ GL ++ ++L+ Y N I AI + +E +
Sbjct: 596 KDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655
Query: 355 ------------------------KGSLDVAT--YDVLLDGLFKDGRMEEAVRIFDYMKE 388
K S++V Y +++ GL K G+M+EA+ F+ M+
Sbjct: 656 CSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRS 715
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ C +A K DEM+ G PD +Y +++GF
Sbjct: 716 RSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGF 767
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 192/453 (42%), Gaps = 54/453 (11%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSAC--NA 52
+C+ D D ++ + YS+ + DG ++ + G + A N
Sbjct: 212 TCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNL 271
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----G 108
L+DAL + + A L G M V+P+ T+ ++ L RS +F V LL G
Sbjct: 272 LMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLG 331
Query: 109 IYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
I + V+ N +ID++ +KG F A +EM + + + TY+ I + + E +
Sbjct: 332 ITPNEVICNELIDWHCRKGHFTEAIRLFDEMVS-KEMKSTAVTYNLIARALCKEGEMERA 390
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+RI+ M+ + L + V+ L
Sbjct: 391 ERILEEMLSTGMTIHSGLF--NSVVAGL-------------------------------- 416
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L + GR++ +++ + +RG+ D+ A LC+ + +E G+ ++E+G
Sbjct: 417 --LQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLC 474
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+ + C K E+L +++KG+ LD+ + +++ C + +I++A+ L
Sbjct: 475 INIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKL 534
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
+ + D ++ ++ G+MEEA+ + MK V S+ ++ C
Sbjct: 535 RDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCK 594
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+++KA + +E++ G KP+ Y +I G+
Sbjct: 595 AKDIQKANEYLNELMACGLKPNAVIYNALIGGY 627
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE-RGYIPC 289
S G ++ A+ +H++S R + A + L + C + ++ + + P
Sbjct: 169 SARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPN 228
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC--SSLMEYYCSNRQIDKAIAL 347
+ + + C GK + ++LS ++ GL + + LM+ C + ++D+AI L
Sbjct: 229 GYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRL 288
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKD---------------------------------- 373
++E+ + + + T+ +L++GL +
Sbjct: 289 KGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCR 348
Query: 374 -GRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
G EA+R+FD M KE+K ++ ++ ++ LC E+ +A + +EML G
Sbjct: 349 KGHFTEAIRLFDEMVSKEMKS-TAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSG 407
Query: 431 TYKQVISGFM 440
+ V++G +
Sbjct: 408 LFNSVVAGLL 417
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 207/495 (41%), Gaps = 72/495 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
ALS +++ KG +D ++ ++ G +P++ NAL+++L + + A L+ M
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM 392
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDF 128
G+ N T+S++ CR GK + + L I + + YN +I+ + K G+
Sbjct: 393 GEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNL 452
Query: 129 GAAFDRLNEM-------------------CN---------------GRNLTPGFSTYSSI 154
AA +EM CN G+ + P T++++
Sbjct: 453 SAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTL 512
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPK----------HFLSGN--------DYVIQK-- 194
+ R + + R+ M+E+ ++P H GN + ++QK
Sbjct: 513 ISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572
Query: 195 -------------LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
L G+ A+ E +L + +L KEGR+++A+
Sbjct: 573 VPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALG 632
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + +RG+ + Y ++ KE V GLL+++ ++ P + + +
Sbjct: 633 VCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYS 692
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G K+ + ++D+G + ++L+ C +DKA L ++ + +
Sbjct: 693 KAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
TY LD L ++G ME+AV++ + M + + ++ S+ I+V C L + +A K DEM+
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMI 812
Query: 422 KMGHKPDEATYKQVI 436
PD TY +I
Sbjct: 813 DNAIFPDCITYSTII 827
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 188/432 (43%), Gaps = 7/432 (1%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S L++ Y + D + ++R+MR +P V +L+ L + + + L+G
Sbjct: 158 SLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFG 217
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSSVMYNLVIDFYSKKGDF 128
++ G+ P+ + + V + C F + ++ ++S + V+YN++I K
Sbjct: 218 EILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRV 277
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + N + + LT TY +++ G + ++ EV ++ M+E +P +
Sbjct: 278 WEAVEIKNGLIQ-KGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTE--AAL 334
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+++ L GK A + R ++ +L K+G+ EA ++ + E
Sbjct: 335 SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G+ D Y ++ C+ + + L ++ G + + C G
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++DKGL +SL+ YC+ ++ +A L+ ++ + + T+ L+
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
LF+ RM +A R+FD M E ++ + ++ +++ C KA + ++M++ G P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574
Query: 428 DEATYKQVISGF 439
D TY+ +IS
Sbjct: 575 DTYTYRPLISSL 586
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 187/410 (45%), Gaps = 25/410 (6%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GFVP +A ++L++ L R+ ++ A L + + G P+ F ++ + LC+ GKF+
Sbjct: 326 GFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEA 385
Query: 102 LGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSIL 155
L + G+ ++ V Y+++ID + ++G A L +M G +T Y+S++
Sbjct: 386 ELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKIT--VYPYNSLI 443
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + M++K L P + +I + GK + A ++ +
Sbjct: 444 NGHCKLGNLSAAVSFFDEMIDKGLKPT--VVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I T ++ AL + R+ +A +++ + E+ + + Y + CKE +
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL +V++G +P ++S C G+ E ++ + + + L+ C S+L+ Y
Sbjct: 562 ELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGY 621
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL------ 389
C ++ A+ + ++ K +D+ Y VL+DG K+ ++ +F +K +
Sbjct: 622 CKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE---QDTSAVFGLLKNMHDQRLR 678
Query: 390 --KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
KV+ +S ++ ++KA D M+ G P+ TY +I+
Sbjct: 679 PDKVIYTS----MIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 172/377 (45%), Gaps = 26/377 (6%)
Query: 78 VSPNKFTW---SLVAQILCRSG--KFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDF 128
V+ N F W SL+ +L R G EV LLD SS+ ++L+I Y ++
Sbjct: 116 VNANLF-WPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRM 174
Query: 129 GAAFD-----RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
FD RL C L P T +L+G + + ++ + G ++ + P
Sbjct: 175 ---FDSVLIFRLMRQCE---LMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDI 228
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++ VI+ ++ A+ + +R E +L ++ L K RV EA++I
Sbjct: 229 YIYVA--VIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIK 284
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + ++G+T + Y V LCK + E G++ +++E G++P LS V K
Sbjct: 285 NGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRK 344
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
GK + +L++ V G + F ++L+ C + + D+A L ++ + + TY
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+L+D + G+++ A+ M + ++ + +++ C L L A+ DEM+
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464
Query: 423 MGHKPDEATYKQVISGF 439
G KP +Y +ISG+
Sbjct: 465 KGLKPTVVSYTSLISGY 481
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 205/448 (45%), Gaps = 48/448 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EVY +M G P V N +LD+ +Q +++ A L M + G PN T++++ L
Sbjct: 176 EVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGL 235
Query: 93 CRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
SG+ E++ +L G+ S+ Y+ +I Y +KG A RL E R P
Sbjct: 236 SHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEA-SRLGEEMLSRGAVPT 294
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND--YVIQKLSDMGKTYA-- 203
TY++I+ G ++ + + +++ +MV K L+P +S N Y +L ++G+ +
Sbjct: 295 LVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD-LVSYNTLIYGYTRLGNIGEAFLLF 353
Query: 204 AEMIFK--------------------------RACDEKIELQDD----TCGCMLKALSKE 233
AE+ F+ R DE I+ D T +++ K
Sbjct: 354 AELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKL 413
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ---PEEVCGLLRDVVERGYIPCA 290
G + A +++ + RG+ D +A++ + E + P + G+ +++ RG+ P
Sbjct: 414 GNLPMAKELFDEMLNRGL---QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 470
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + F+ G KE EL+ +L GL+ D +S++ + + KA A+ ++
Sbjct: 471 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLE 530
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ V TY VL+ GR++ A+ F M E V + ++ +++ LC +++
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +A K EM G P++ TY +I+
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILIN 618
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 8/318 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ G + ++ +R G VP+V N L+D L R ++ +A L M++ G P+
Sbjct: 340 YTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPD 399
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLN 136
FT++++ + C+ G + L D + + Y I K GD AF
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 459
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM R P TY+ +DG + + + +V M+ L+P H + +I
Sbjct: 460 EML-ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTS--IIHAHL 516
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A +F + I T ++ + + GR+K AI + + E+G+
Sbjct: 517 MAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 576
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A +N LCK + ++ ++ +G P + + C G W+E L +
Sbjct: 577 TYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM 636
Query: 317 LDKGLLLDSFCCSSLMEY 334
LD+ + DS S+L+++
Sbjct: 637 LDREIQPDSCTHSALLKH 654
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 4/268 (1%)
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTY-AAEMIFKRACDEKIELQDDTCGCMLKALSK 232
MV K +LP L + V++ L D + A ++ + I T ML + K
Sbjct: 145 MVSKGMLPD--LKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCK 202
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+G+V+EA+Q+ + + G D Y VN L + E+ L+++++ G A
Sbjct: 203 QGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYT 262
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ C KG+ E L +L +G + +++M C ++ A L +
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
D+ +Y+ L+ G + G + EA +F ++ +V S ++ ++ LC + +L
Sbjct: 323 NKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLD 382
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
AM+ DEM+K G PD T+ ++ GF
Sbjct: 383 VAMRLKDEMIKHGPDPDVFTFTILVRGF 410
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 156/421 (37%), Gaps = 72/421 (17%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY-RQNEIRLASCLYGAMVRDGVSP 80
Y+ K + L V+ M G +P + CN +L L R + I +A +Y MV G+ P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ V YN ++D + K+G A L +M
Sbjct: 189 ------------------------------TVVTYNTMLDSFCKQGKVQEALQLLLQM-Q 217
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
P TY+ +++G LS G+
Sbjct: 218 KMGCLPNDVTYNVLVNG-------------------------------------LSHSGE 240
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A+ + + +E+ T +++ ++G++ EA ++ + RG Y
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK + + LL +V + +P + + + G E L + + +G
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L+ ++L++ C +D A+ L ++ K DV T+ +L+ G K G + A
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420
Query: 381 RIFDYMKELKVVSSSSFVIVVSRLCHLK--ELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+FD M + + F + + LK + KA +EML G PD TY I G
Sbjct: 421 ELFDEMLN-RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDG 479
Query: 439 F 439
Sbjct: 480 L 480
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 186/408 (45%), Gaps = 9/408 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M ++G V + N L++ L R N + A ++G M + G+ P+ T++ + +C GK
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK 178
Query: 98 FEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+V + L + + S + YN +I+ G+ A +M P TY+
Sbjct: 179 IKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM-EQNGCKPNVVTYN 237
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+I+D + + + MV + + P + ++ L +G+ A +FKR
Sbjct: 238 TIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNS--IVHGLCCLGQLNEATRLFKRME 295
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T ++ +L K+ V +A + ++GI Y ++ LC Q
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L + + ++G P + + + S C + E LS ++D+G+ ++ S+++
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+C+ Q+D+A L ++ + T+ +L+DGL ++G + EA +F+ M E V
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +++ C ++ +A K + M+ G PD +Y +I+G+
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 197/436 (45%), Gaps = 17/436 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+++++C + V+ M G P V L++ + + +I++A LY M
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
VR G P+ +++ + LC SG + + + +G +V+ YN +ID K
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A D L+EM GR + P TY+SI+ G + E T + R+ + ++ +
Sbjct: 250 NDAMDFLSEMV-GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + Y + ++D + +EM+ D+ I T +L L G++ EAI+++
Sbjct: 309 IIDSLYKDRLVND-AADFLSEMV-----DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ ++G Y ++ LCK+ + L ++V+RG P A+ S + C G
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ E +L ++ + ++ ++ S L++ C + +A + + + ++ TY+
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L++G +M EA ++F+ M S+ I+++ C+ + + KA +M
Sbjct: 483 ALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK 542
Query: 424 GHKPDEATYKQVISGF 439
P+ TY ++ G
Sbjct: 543 KLTPNTVTYNTIMKGL 558
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 177/414 (42%), Gaps = 9/414 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ V++ M G P V N ++D+L + + A MV G+ P+ T++ +
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 91 ILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC G+ L +G V+ YN++ID K A D L+EM + + +
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVD-QGIP 335
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++IL G + + R+ M +K P + + +I L A
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD--VVAYNTIIDSLCKDRLVNDAM 393
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
D I T +L G++ EA Q++ + R + + V+ L
Sbjct: 394 EFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGL 453
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+E E + + E+G P + + C + K E ++ ++ KG D
Sbjct: 454 CQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDL 513
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ L+ YC++R++DKA AL ++ K + + TY+ ++ GL GR+ +A +F
Sbjct: 514 HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M ++ + ++ I+++ LC L +A+K M + +PD Y +I G
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 157/363 (43%), Gaps = 8/363 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + +++ M G P V N ++D+LY+ + A+ MV G+ P+ T+
Sbjct: 282 GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTY 341
Query: 86 SLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + LC G+ + L G V+ YN +ID K A + L+EM +
Sbjct: 342 TTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVD 401
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R + P TYS+IL G + + + ++ MV + ++P ++ L G
Sbjct: 402 -RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF--SILVDGLCQEGM 458
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +F+ ++ +E T ++ ++ EA +++ ++ +G Y
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N C + ++ LL + + P + + + C G+ + +EL + G
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+L S L+ C + +D+A+ L +++ K D+ Y +L++G+F G++E A
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638
Query: 381 RIF 383
+F
Sbjct: 639 GLF 641
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 153/386 (39%), Gaps = 55/386 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +L + G + + +++ M G P V A N ++D+L + + A MV
Sbjct: 342 TTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVD 401
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVIDFYSKKGDFGA 130
G+ PN T+S + C G+ + L + +VM N +++D ++G
Sbjct: 402 RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---KHF 184
A F+ + E + + P TY+++++G K + ++ +MV K P +
Sbjct: 462 ARWVFETMTE----KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYN 517
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ N Y + D K +M K+ + T ++K L GR+ +A +++
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNTV-----TYNTIMKGLCYVGRLLDAQELFK 572
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ Y +N LCK +E L + + E+ P
Sbjct: 573 KMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEP---------------- 616
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +L +L +G+ + +++ A L K+ TY+
Sbjct: 617 -----DIILYTILIEGMFIGG--------------KLEVAKGLFSKLSADGIQPPGRTYN 657
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELK 390
V++ GL K+G +EA +F K +K
Sbjct: 658 VMIKGLLKEGLSDEAYELFRKWKMMK 683
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G L +++K + + + + + G+T +N LC+ + + + + +
Sbjct: 97 GKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFK 156
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P + + + C +GK K EL + ++ G D ++L+ C++ +
Sbjct: 157 LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM 216
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A+ + K+E+ +V TY+ ++D L KD + +A+ M + + ++ +V
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
LC L +L +A + M + G KPD TY +I
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 188/429 (43%), Gaps = 47/429 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY-GAMVRD 76
+L Y G + + ++ + +G +V + N LL+ L + L ++ +
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAA 131
G++PN FT +L+ + LC+ E +LD G+ + V Y ++ Y +GD +A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L EM + R P +TY+ ++DG
Sbjct: 246 KRVLEEMLD-RGWYPDATTYTVLMDG---------------------------------- 270
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+G+ A + +IE + T G M++AL KE + EA ++ + ER
Sbjct: 271 ---YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
S ++ LC++H+ +E CGL R +++ +P LS + C +G+ E +
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L +KG + ++L+ C ++ +A L + + K + TY+VL++GL
Sbjct: 388 LFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLS 446
Query: 372 KDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K+G ++E VR+ + M E+ + ++F+I+ L L + AMK M M K D+
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK-IVSMAVMNGKVDKE 505
Query: 431 TYKQVISGF 439
+++ + F
Sbjct: 506 SWELFLKKF 514
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 12/300 (4%)
Query: 146 PGFS----TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
PGF+ TY SIL + + D + LM + + G + I L + G
Sbjct: 77 PGFTHNYDTYHSIL---FKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLA 133
Query: 202 --YAAEM-IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GITVRDSD 257
Y + M IF R D ++ + +L L + R ++ E GIT
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
V LCK++ E +L ++ G +P + + + +G + + +L +L
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
D+G D+ + LM+ YC + +A + +EK + + TY V++ L K+ +
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 378 EAVRIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA +FD M E + SS V+ LC ++ +A +MLK PD A +I
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 185/424 (43%), Gaps = 21/424 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D +R +GF P V + ++D L R NE+ L M G +PN T+
Sbjct: 15 GRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTY 74
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + L G+ + LL+ + + + L+I K+G+ AAF ++EM +
Sbjct: 75 NTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVD 134
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDM 198
R P ++ +L + + + ++ LL Y ++ L
Sbjct: 135 -RGFVPDVEIHTVLLHALCELGRVDEA----WFFFQQVLLIGFTPDAVTYNTMVDGLYKA 189
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ AA M+ + + T + LSK G + A + + + + G++ Y
Sbjct: 190 GRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTY 249
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
A ++ LCK + + GLLRD + + S + C + +E +LL A+
Sbjct: 250 DALIDGLCKAGKLDIALGLLRDKNSQAGM---FAFSSLLHGLCQAHRLEEAIQLLKAM-- 304
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+ + C +SLM C R++D+A L +++ S DV TY++LL GL K R+ E
Sbjct: 305 -PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPE 363
Query: 379 AVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQV 435
A R + M+ + S + +F ++ LC+ + +A + ++ M+ + G P+ TY +
Sbjct: 364 AYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFL 423
Query: 436 ISGF 439
+ G
Sbjct: 424 LEGL 427
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 173/430 (40%), Gaps = 45/430 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D G D + V R MR G +P N L+D +++ +R A L M+
Sbjct: 582 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 641
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ T++ + LCRSG+F+ + +LD +++ Y+ ++D K G
Sbjct: 642 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M + P YS+++DG + + + + + M+ +P D
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIP-------DV 754
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V T ++ L GR+ ++++ ++ERG
Sbjct: 755 V------------------------------TFSILINGLCDAGRIDTGLELFCGMAERG 784
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y A +N C + + LL ++ G + + + CG + E
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV 844
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++ + D ++L+ ++R+ ++A+ L + GS D Y ++DGL
Sbjct: 845 SYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL 902
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
FK G E A ++ M+ ++ I++S L K+L A +EML+ KPD
Sbjct: 903 FKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDA 962
Query: 430 ATYKQVISGF 439
Y +I F
Sbjct: 963 IVYSSLIDAF 972
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 189/440 (42%), Gaps = 36/440 (8%)
Query: 33 EVYR----MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-DGVSPNKFTWSL 87
E YR M R G P V + L+ L + A +Y MV +G+SPN+FT++
Sbjct: 363 EAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAF 422
Query: 88 VAQILCRSGK-------FEVVL-----GLLDSGIYSS--------------VMYNLVIDF 121
+ + LC++G FE +L I+S V YN ++
Sbjct: 423 LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTG 482
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
SK G A L M L+P T++S+LDG + ++ + + +E+ P
Sbjct: 483 LSKSGMVRDALGLLEFMIES-GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRP 541
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I LS M K A + + + T ++ L K GR+++A+
Sbjct: 542 N--VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 599
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + + G Y ++ K + E GLLR+++E G+ P + + C
Sbjct: 600 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 659
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK-GSLDV 360
G++ E E+L + +G ++ SS+++ C ++ +A+ K+ + + + V
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
Y L+DGL K GR++EA + M + ++ +F I+++ LC + ++
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 420 MLKMGHKPDEATYKQVISGF 439
M + G K D Y +I+ +
Sbjct: 780 MAERGCKADIYAYNAMINAY 799
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 183/451 (40%), Gaps = 57/451 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V +D L + + A + +M + GVSPN T+ + LC++GK ++ LGL
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL 268
Query: 105 L-----DSGI--YSSVMYNLVIDFYSKKG----------DFGAAFDRL-NEMCNGRNLTP 146
L +G+ +SS+++ L ++ F+ L N +C R +
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDE 328
Query: 147 GFS---------------TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F TY+ +L G + + + R V LM + + ++ + +
Sbjct: 329 AFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFST-L 387
Query: 192 IQKLSDMGKTYAAEMIFKR-ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
IQ L + G+ A +++R E I T +L+ L K G + Q + + ER
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLERE 447
Query: 251 ITVRDS---------------------DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
S Y V L K + GLL ++E G P
Sbjct: 448 WRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPD 507
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + C + + + + L++G + S+L++ ++D+A+ L
Sbjct: 508 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 567
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
K+ +L + TY ++DGL K GRME+AV + M++ + + ++ ++ +
Sbjct: 568 KMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 627
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LR+A+ EML+ G P TY + G
Sbjct: 628 RLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L G+ A F++A T ++ L ++ V + ++ ++
Sbjct: 5 NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG Y VN L + + +E LL + G P + + C +G+ +
Sbjct: 65 RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ ++D+G + D + L+ C ++D+A ++ + + D TY+ ++D
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184
Query: 369 GLFKDGRMEEAVRIFDYMKE-LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL+K GR+E A + + E + +F I V L L A + D M + G P
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244
Query: 428 DEATYKQVISGF 439
+ TY +I G
Sbjct: 245 NTVTYDALIDGL 256
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 121/311 (38%), Gaps = 9/311 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
GR S++++ G GLE++ M G + A NA+++A + E A
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---GIYSSVMYNLVIDFYS 123
L M G++ N T +V + LC + + + + S + YN +I
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLV 868
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
A + L M +P Y +++DG + EV+ +++ M + P
Sbjct: 869 ASRRSEQALELLRAMVADGG-SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPD- 926
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
L +I LS + A F+ + ++ ++ A K +V +A +
Sbjct: 927 -LRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA---W 982
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
L+ GI + Y V+ LCK ++ ++R++ + P + + +
Sbjct: 983 KLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAE 1042
Query: 304 GKWKEVEELLS 314
G+ E +L++
Sbjct: 1043 GRVDEAVKLVN 1053
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 193/448 (43%), Gaps = 17/448 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ +G + + + +L G + + + M G+ P V A N LLDALY++ ++
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKV 166
Query: 64 RLASCLYGAM--VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYN 116
A L+ M V+P+ T++ + CR K + + L I +V YN
Sbjct: 167 AEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYN 226
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
++ ++K + A + +M + P +TYS +L G R + M E
Sbjct: 227 SILLGLARKSNMDEAEEMFKKMVDS-GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEG 234
K+ P L + VI L K A + + KI D T +L L K
Sbjct: 286 KRFSPDVLLC--NAVIDMLCKAKKVDDAHKVLEEM--SKIGAVPDVVTYNILLDGLCKTN 341
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
V +A +++ + + G Y +N LCK ++ + L ++ER +P + +
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C GK E ++LL + + +L D C++LM C +++ D+A+ L + +
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS---SFVIVVSRLCHLKELR 411
DV ++++L GL ++G++ +A+ F M + S ++ +V+ L +
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVD 521
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A+ +M G PD Y +++G
Sbjct: 522 QAVDYFQQMTGSGCAPDYVAYNTLMNGL 549
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 181/406 (44%), Gaps = 11/406 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
GF P V + ++ L + ++ A + M GV+P+ T++++ LCR+GK
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 99 -EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E+ +++ G + +V YN +I+ K + A+ L EM + + P TY++IL
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS-KGYEPDNITYNTILS 123
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR--ACDE 214
G R K + + M + P + + ++ L GK A +FK D
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPD--VVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
K+ T ++ + + EA++++ + +G Y + + L ++ +E
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ + +V+ G P S ++ C G EL + +K D C+++++
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
C +++D A + ++ K+ DV TY++LLDGL K +++A +F M +
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
Query: 395 -SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ +V++ LC ++ A D M++ PD T+ ++ G
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 160/366 (43%), Gaps = 10/366 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +++++ + G++P N++L L R++ + A ++ MV G +PN T+S+V
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CR G L L + ++ N VID K A L EM +
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM-SKIGA 323
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY+ +LDG + + + + MV+ P + V+ L K + A
Sbjct: 324 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD--IVSYSVVLNGLCKTNKVHDA 381
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++F R + K+ T ++ L K G++ EA + ++SE + ++
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL--DKGLL 322
LC++ + +E L + +VE+G + + + +A C +GK + +++ D
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D ++L+ ++D+A+ ++ + D Y+ L++GL K GR +A R+
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Query: 383 FDYMKE 388
MKE
Sbjct: 562 TQAMKE 567
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 53/308 (17%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +V M G VP V N LLD L + N + A L+ MV +G +P+ ++S+V
Sbjct: 310 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 369
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC++ K L D I V +N+++D K G A D L+ M N+
Sbjct: 370 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE-HNV 428
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK----KLLPKHFLSGNDYVIQKLSDMGK 200
P T ++++ G R ++T+ + R+ MVEK +LP + V+ L GK
Sbjct: 429 LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNI------VLAGLCREGK 482
Query: 201 TYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
A + FK E D T ++ AL + GRV +A+ + ++ G DY
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA---PDY 539
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
A+ N L GL + +G+ + + L A+ +
Sbjct: 540 VAY-NTLMN--------GLRK-----------------------QGRHIQADRLTQAMKE 567
Query: 319 KGLLLDSF 326
KG L D F
Sbjct: 568 KGFLSDCF 575
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
++E+G Y ++ LCK + E ++ ++ E+G P + V C GK
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E +EL ++++G ++ ++L+ C + I++A L ++ D TY+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 366 LLDGLFKDGRMEEAVRIFDYM--------------------KELKVVSSS---------- 395
+L GL + G++ EA + FD M KE KV +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 396 --------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C +++ +AMK +++ G+ PD TY ++ G
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 21/414 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M +G P V N L+++ N A + +++ G+ P+ T++ + + LC GK
Sbjct: 93 MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L L D I + V Y +I+ K G+ AA L M G N P Y+
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQG-NCQPDVVVYT 211
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
SI+D + + + + MV + + P F + +I L ++ + + +
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS--LIHSLCNLCEWKHVTTLLNQMI 269
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ KI ++ AL KEG++ EA + ++ RG+ Y A ++ C + + +
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + +V GY P + + + C + + L + K L+ ++ ++LM
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C ++ AIAL ++ D+ATY +LLD L K ++EA M LK +
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEA------MALLKTI 443
Query: 393 SSSS-------FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ + IV+ +C EL A + G +P+ TY +I+G
Sbjct: 444 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 181/433 (41%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P + L+ L + +I A L+ M
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKM 163
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G PN T+ + LC+ G + LL S + V+Y +ID K
Sbjct: 164 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 223
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ ++M G+ ++P TY+S++ + + ++ M+ K++P +
Sbjct: 224 TEAFNLFSKMV-GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L GK A + +E T ++ + + EA++++ +
Sbjct: 283 --VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y +N CK + ++ L ++ ++ IP + + + C G+ ++
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ G + D L++Y C +D+A+AL IE D+ Y +++D
Sbjct: 401 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 460
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A IF + + + ++ I+++ LC L +A K EM G P
Sbjct: 461 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 520
Query: 428 DEATYKQVISGFM 440
D TY + G +
Sbjct: 521 DGCTYNTITQGLL 533
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 175/384 (45%), Gaps = 15/384 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R M P V +++D+L + ++ A L+ MV G+SP+ FT++ +
Sbjct: 191 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC +++ V LL+ I S +M ++ V+D K+G A D ++ M R +
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI-IRGVE 309
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++DG + + + ++ MV P + +S N +I + + A
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP-NVISYNT-LINGYCKIQRMDKAT 367
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F+ C +++ T ++ L GR+++AI ++H + G + Y ++ L
Sbjct: 368 YLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 427
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ +E LL+ + P + + C G+ + ++ S + KGL +
Sbjct: 428 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 487
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ ++ C +D+A L ++++ S D TY+ + GL ++ +EA+R
Sbjct: 488 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALRAIQL 544
Query: 386 MKELKV----VSSSSFVIVVSRLC 405
++E+ S+ ++V LC
Sbjct: 545 LQEMLARGFSADVSTTTLLVEMLC 568
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 22/266 (8%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ ++V+ M G+ P V + N L++ + + A+ L+ M + + PN T++ +
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 90 QILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC G+ + + L I Y +++D+ KK A L + G N+
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI-EGSNM 448
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y+ ++DG R + E + I + K L P + +I L G A
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN--VRTYTIMINGLCRRGLLDEA 506
Query: 205 EMIFKRACDEKIELQDDTC---GCMLKALSKEG-RVKEAIQIYHLISE---RGITVRDSD 257
+F +E+ + C GC +++ + KEA++ L+ E RG + S
Sbjct: 507 NKLF-------MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVST 559
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVE 283
V +LC + + V +L + V+
Sbjct: 560 TTLLVEMLCDDKLDQSVKQILSEFVQ 585
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P ++ +R + S ++ V L + + G+ D + + L+ +C + A ++
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCH 406
KI KL D AT+ L+ GL +G++ +A+ +FD M E + ++ +++ LC
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ M + +PD Y +I
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSII 214
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 191/419 (45%), Gaps = 44/419 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G ++ ++ M + G +P V + + +++ + E++ L M G+ PN +T+
Sbjct: 267 GRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ V +LC++GK V+ ++ GI V+Y +ID + K G+ +A+ +EM
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM-Q 385
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R ++P F TY++++ G + + +D++ MV K+L P
Sbjct: 386 KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV---------------- 429
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
TY A L D C KEG++KEA +++ + + G+T Y A
Sbjct: 430 TYTA-------------LIDGYC--------KEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK + + LL ++ +G + V C G + +L+ + G
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D+ ++LM+ YC +R++ +A L ++ + V T++VL++G G +E+
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 381 RIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ +M E ++ +++++ ++ + C +R + + M G PD TY +I G
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 186/422 (44%), Gaps = 12/422 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ-NEIRLASCLYGAMVRDGVSPNKFT 84
G+ + +++ M YG + +V +CN + L + I++A ++ GV N +
Sbjct: 196 GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTAS 255
Query: 85 WSLVAQILCRSGKF----EVVLGL-LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++++ LC+ G+ +++L + L I + Y+ VI+ Y + G+ + EM
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM- 314
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ L P TY+ ++ + K ++R++ M+ + + P + +I +G
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT--LIDGFCKLG 372
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+A +F KI T ++ L + GRV EA +++H + + + + Y
Sbjct: 373 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 432
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A ++ CKE + +E L +++ G P + + C G+ ELL + K
Sbjct: 433 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 492
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL L+ + +SL+ C ID+A+ L +E D TY L+D K M A
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Query: 380 VRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ M +EL+ + +F ++++ C L K ML+ G P+ TY +I
Sbjct: 553 HELLRQMLDRELQ-PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611
Query: 438 GF 439
+
Sbjct: 612 QY 613
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 140/325 (43%), Gaps = 8/325 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+ + + ++D Y +G + ++ M G P + AL D L + E+
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVI 119
A+ L M R G+ N +T++ + LC++G + + L+ +G + +V Y ++
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D Y K + A + L +M + R L P T++ +++G E ++++ M+EK +
Sbjct: 541 DAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P + + +I++ A I++ C + + +T ++K K +KEA
Sbjct: 600 MPN--ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 657
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + +G + S Y A + K + E L + G + + F
Sbjct: 658 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 717
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLD 324
+GK + EL ++K L+ D
Sbjct: 718 NYDEGKMELTLELCDEAIEKCLVGD 742
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 195/446 (43%), Gaps = 44/446 (9%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L+ + + + G + N +++ R + A + G +++ G P+ T++ +
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 167
Query: 92 LCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC GK + L+D + + V YN +++ + GD AFD L +M RN+
Sbjct: 168 LCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM-EERNVKA 226
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TYS+I+D R + + + M E K + ++ N +++ L GK +
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNS-LVRGLCKAGKWNDGAL 284
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ K +I T +L KEG+++EA ++Y + RGI+ Y ++ C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 267 KEHQPEEVCGLL-----------------------------------RDVVERGYIPCAM 291
+++ E +L R++ +RG + A+
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
S V C GK K EEL ++ G+L D L++ C N +++KA+ + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
+K K L + Y +++G+ K G++E+A +F + V + ++ +++S LC L
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVI 436
+A +M + G+ P++ TY +I
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 165/373 (44%), Gaps = 18/373 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
+ ++D+L R I A L+ M G+ + T++ + + LC++GK+ ++ ++
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
I +V+ +N+++D + K+G A + EM R ++P TY++++DG +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLS 350
Query: 166 VSDRIVGLMVEKKLLP-----KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
++ ++ LMV K P + G Y + K D G +F+ +
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKG--YCMVKRVDDGMK-----VFRNISKRGLVANA 403
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T +++ + G++K A +++ + G+ Y ++ LC + E+ + D
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + + + + C GK ++ L ++ KG+ + + ++ C
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV 400
+ +A L K+E+ + + TY+ L+ +DG + + ++ + MK + +S + +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 401 VSRLCHLKELRKA 413
V + EL K+
Sbjct: 584 VIDMLLSGELDKS 596
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 142/327 (43%), Gaps = 10/327 (3%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M++ E R+ ++D S ++D G + +++ M G +V N+L+ L
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM 114
+ + + L MV + PN T++++ + + GK E+ ++ GI +++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++D Y + A + L+ M + +P T++S++ G ++ + ++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ ++ L+ ++Q GK AE +F+ + T G +L L
Sbjct: 394 ISKRGLVANAVTYS--ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G++++A++I+ + + + + Y + +CK + E+ L + +G P M
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKG 320
+ ++ C KG E LL + + G
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 152/380 (40%), Gaps = 44/380 (11%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVID 120
A L+ M+R P +S + R+ +F +VL L+ ++ N++I+
Sbjct: 72 AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A+ L ++ P +T++++++G K + +V MVE
Sbjct: 132 CFCRCCKTCFAYSVLGKVMK-LGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ + G T A + ++ + ++ T ++ +L ++G + AI
Sbjct: 191 PD--MVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + +GI Y + V LCK + + LL+D+V R +P + + +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+GK +E EL ++ +G+ S ++
Sbjct: 309 VKEGKLQEANELYKEMITRGI-----------------------------------SPNI 333
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
TY+ L+DG R+ EA + D M K +F ++ C +K + MK
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 420 MLKMGHKPDEATYKQVISGF 439
+ K G + TY ++ GF
Sbjct: 394 ISKRGLVANAVTYSILVQGF 413
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 153/330 (46%), Gaps = 8/330 (2%)
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
V YN +ID Y K AF L M + L P T++ I++G R + + + ++
Sbjct: 19 VTYNTMIDGYCKLKRTDEAFGFLRSM-GLKGLEPNLITFNMIINGLCRDGRLKETSEVLV 77
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M K +P + ++ G + A ++ + T ++ ++ K
Sbjct: 78 EMSRKGYVPDEVTY--NTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G + A++ + + RG+ + Y +N ++ +E +L ++ G+IP +
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C G+ +E LL ++ KG+L D S+++ + N+++D+A +K+E
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA--FQMKVE 253
Query: 353 KLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ S+ D TY L+ GL + R+ EA +F M +K+ ++ +++ C +
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGD 313
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L KA+ HDEM++ G PD TY +I+G
Sbjct: 314 LNKALHLHDEMIQKGFLPDAVTYNVLINGL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 185/432 (42%), Gaps = 30/432 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
GL ++ M G +P V N ++D + A +M G+ PN T++++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 91 ILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNL 144
LCR G+ EV++ + G + V YN +++ Y K+G+F A EM NG L
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG--L 119
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY+S+++ + + M + L P +I + G A
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNE--RTYTTIINGFAQQGLLDEA 177
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ T ++ GR++EAI + + +G+ Y ++
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ + + + +++ + +P A+ S + C + + E ++ +L L D
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVR-I 382
F ++L+ YC ++KA+ LH ++ + KG L D TY+VL++GL K R +EA R +
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQ-KGFLPDAVTYNVLINGLNKQARSKEARRLL 356
Query: 383 FDYMKELKVVSSSSFVIVVSRLCHLKELRKA------------MKNHDE----MLKMGHK 426
+ + S+ ++ ++ C++ E + A M D+ M+ HK
Sbjct: 357 LKLFYDDSIPSAVTYNTLIENCCNI-EFKSAVALVKGFCMKGLMDEADQVFESMINKNHK 415
Query: 427 PDEATYKQVISG 438
P+EA Y +I G
Sbjct: 416 PNEAIYNVIIHG 427
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 186/437 (42%), Gaps = 39/437 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + +++++ G + EV M G+VP N L++ ++
Sbjct: 47 KGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQ 106
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVID 120
A L+ MVR+G+SPN T++ + +C++G + D G+ + Y +I+
Sbjct: 107 ALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIIN 166
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
++++G A+ LNEM P TY+++++G + E + ++ MV K +L
Sbjct: 167 GFAQQGLLDEAYRVLNEMTRS-GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVL 225
Query: 181 P-----KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
P +SG + + D EMI K + + T +++ L ++ R
Sbjct: 226 PDVVSYSTIISG--FARNQELDRAFQMKVEMIGKSVLPDAV-----TYSSLIQGLCEQRR 278
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ EA ++ + + + Y +N CKE + L +++++G++P A+ +
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + + KE LL + + + ++L+E C N + A+A
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE-NCCNIEFKSAVA--------- 388
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAM 414
L+ G G M+EA ++F+ M + + + + +++ C + + KA
Sbjct: 389 ----------LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAY 438
Query: 415 KNHDEMLKMGHKPDEAT 431
K + EM+ + P T
Sbjct: 439 KLYKEMVHVDFVPHTVT 455
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 181/403 (44%), Gaps = 13/403 (3%)
Query: 41 YGFVPAVSACNALLDALYRQNE-IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
YG V V +CNA L + +E I +A ++ G+S N +++++ LCR GK +
Sbjct: 219 YGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVK 275
Query: 100 VVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
LL S V Y+ VID Y G+ A +++M + L P TY+SI
Sbjct: 276 EAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM-QIKGLKPNRYTYNSI 334
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ + K+ +++++ M+ +K++P + + +I +G A F +
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT--LIHGFFKLGHVRTANKWFDEMLSK 392
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
KI T +++ + G+V E ++H + RG+ + Y ++V CK +
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++V+ G P + + C G+ ELL + KGL L+ +S++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
C I++AI L ++E D TY ++D + G +++A ++ M + + +
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 395 -SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+F ++++ C L L + ML+ G PD TY ++
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 171/409 (41%), Gaps = 48/409 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V R M +P L+ ++ +R A+ + M+ +SP+ T++ + Q
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 93 CRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ GK L I V Y +ID Y K G+ AF NEM +TP
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQ-MGMTPN 467
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY +++DG ++ + + ++ ++ M +K L
Sbjct: 468 IVTYGALIDGLCKHGELDTANELLDEMRKKGL---------------------------- 499
Query: 208 FKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
Q + C M+ + K G +++AI++ + GI Y ++
Sbjct: 500 -----------QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+ ++ LL+++++RG P + + + C G ++ + LL +L+KG++ D+
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++LM+ +C ++ ++ ++ + D TY++L+ G K ++EA ++
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
M E V + +S+ ++ R ++ +A + +EM G D Y
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYN 717
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 13/293 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y G ++ ++ M G P + AL+D L + E+ A+ L M +
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ N ++ + +C++G E + L+ +GI ++ Y VID Y + GD
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L EM + R L P T++ +++G E DR++G M+EK ++P ++ N
Sbjct: 557 AHKLLQEMLD-RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA-ITYNTL 614
Query: 191 VIQKL--SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ Q + M T I+KR ++ + +T ++K K +KEA +Y + E
Sbjct: 615 MKQHCIRNSMNTTTK---IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+G + Y A + K+ + E L ++ G + E+ F C
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADG-EIYNFFVDMC 723
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + F G E +LL +L GL++ C++ + +N + I +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE---GIEM 244
Query: 348 HIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS----SFVIVVS 402
IK+ G S + +Y++++ L + G+++EA R+ + ++ SS+ S+ V+
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRL---LMQMDFRSSTPDVVSYSTVID 301
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
CHL EL+KA+K D+M G KP+ TY +I
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSII 335
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 186/404 (46%), Gaps = 11/404 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ ++ G + SA N+L+ + + ++ M +G+ P+ +T++ + L
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231
Query: 94 RS---GKFEVVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
S E V ++D G + +V YN++I Y K G A ++ +M +N+ P
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDM-EMKNVKPDK 290
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY +++ + + M E+ L +P H S VI L K A +
Sbjct: 291 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYS---LVIGGLCKQRKCMEAYAV 347
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F+ + ++ + SK G ++EA++++ + G Y VN LCK
Sbjct: 348 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCK 407
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ ++ L +G AM + + G+ ++ E L + +KG DS+C
Sbjct: 408 SGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC 467
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+++++ + +ID+A+AL ++E+ V T+ +L+DGLFK+ + EEA++ +D M
Sbjct: 468 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 527
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ + + +SF + LC ++ +A K D++ MG P+ A
Sbjct: 528 DKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETA 571
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 128/314 (40%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + SLV+ + M+ V+ M G V+ AL+D+ + + A
Sbjct: 320 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 379
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M +G P+ T+S++ LC+SG+ LD G+
Sbjct: 380 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGR-------LDDGM----------------- 415
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
L + C + + Y+S++DG + + E ++ + M EK +
Sbjct: 416 -------ELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCY 468
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ GK A +F R +E + T ++ L KE + +EAI+ + +
Sbjct: 469 --NAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKM 526
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + A LC + C +L D+ G IP + + C +
Sbjct: 527 IDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRI 585
Query: 307 KEVEELLSAVLDKG 320
KE +L ++D+G
Sbjct: 586 KEACKLADGIVDRG 599
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 128/298 (42%), Gaps = 6/298 (2%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L+P F T+ +L EK EV+ R K+ H + + +I+ L+
Sbjct: 112 LSPNFVTF--VLQSVELREKPEVAVRFF-FWAGKQKKYVHKIECHVSLIELLTFSADLVK 168
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
++F D + + + ++K+ G V+E + ++ + E GI Y VN
Sbjct: 169 IRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVN 228
Query: 264 VLCKEHQPEEVCGLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L E + +V++ G I P + + + C GK ++ E + K +
Sbjct: 229 GLVNSMFIESAEKVF-EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVK 287
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +L++ S R D ++L++++E+ + +Y +++ GL K + EA +
Sbjct: 288 PDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAV 347
Query: 383 FDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F+ M + ++ + + ++ + +AM+ + M G +PD TY +++G
Sbjct: 348 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGL 405
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 15/279 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D YS G + + ++ M+ GF P + L++ L + + L+
Sbjct: 364 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 423
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
GV+ N ++ + L ++G+ E L + S YN +ID +K G
Sbjct: 424 KGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQ 483
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A F R+ E G + T T++ ++DG + K E + + M++K + P ++
Sbjct: 484 ALALFGRMEE--EGCDQT--VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT--VAS 537
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ L GK A I I + + M+ L K R+KEA ++ I
Sbjct: 538 FRALAIGLCLCGKVARACKILDDLAPMGI-IPETAFEDMINTLCKAQRIKEACKLADGIV 596
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+RG + +N L K + V L+ + GY
Sbjct: 597 DRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGY 635
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 69/280 (24%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + S++++ G DG+E++ R G +L+D L + I
Sbjct: 389 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 448
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+ M G + + + ++ + L + GK + L L
Sbjct: 449 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL--------------------- 487
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
F R+ E G + T T++ ++DG + K E + + M++K + P
Sbjct: 488 ------FGRMEE--EGCDQT--VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITP---- 533
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
T A+ F+ L C C G+V A +I
Sbjct: 534 ---------------TVAS---FR-------ALAIGLCLC--------GKVARACKILDD 560
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ GI + ++ + +N LCK + +E C L +V+RG
Sbjct: 561 LAPMGI-IPETAFEDMINTLCKAQRIKEACKLADGIVDRG 599
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 194/448 (43%), Gaps = 31/448 (6%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S L+++++C+ H G V + G+ P V L+ L + E++
Sbjct: 98 KGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKK 157
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVID 120
A + +V ++ ++ + LC+ G+ + + L+ + S VMYN++ID
Sbjct: 158 ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIID 217
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A + +EM N + + P TY++++ G I+G ++E L
Sbjct: 218 SLCKNKLVGEACNLYSEM-NAKQIYPNVVTYTTLIYGFC----------IMGCLIEAVAL 266
Query: 181 PKHFLSGN--------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
N +I L GK AA+++ ++ T ++
Sbjct: 267 LNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
VK A +++ +++ G+T Y ++ LCK +E L ++ + IP +
Sbjct: 327 VNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTIT 386
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C G+ V +L+ + D+ L D SSL++ C N +D+AIAL K+
Sbjct: 387 FNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMI 446
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSSFVIVVSRLCHLK 408
+ D+ TY +L+DGL K GR++ A +F ++ L + ++ +++S C
Sbjct: 447 TQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDI---RTYTVMISGFCKAG 503
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+A+ +M G P+ T+ +I
Sbjct: 504 LFDEALALLSKMEDNGCIPNAITFDIII 531
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 148/364 (40%), Gaps = 14/364 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+++ R + P V N ++D+L + + A LY M + PN T++ +
Sbjct: 193 AIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIY 252
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C G + LL+ ++ ++++ID K+G AA L M +
Sbjct: 253 GFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAY-VK 311
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTY 202
P TY+S++DG + + + + M + + P + + + K+ D +
Sbjct: 312 PDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISL 371
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
EM K I T ++ L K GR+ + + +R Y + +
Sbjct: 372 FEEMKHKNVIPNTI-----TFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCK ++ L + ++ + P + + C G+ K +E+ +L KG
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYH 486
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
LD + ++ +C D+A+AL K+E + T+D+++ LF+ ++A ++
Sbjct: 487 LDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKL 546
Query: 383 FDYM 386
M
Sbjct: 547 LREM 550
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 129/291 (44%), Gaps = 44/291 (15%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
MM+ Y P V N+L+D + NE++ A ++ +M + GV+P +++++ LC++
Sbjct: 305 MMKAY-VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTK 363
Query: 97 KFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + L + + I +++ +N +ID K G +D +++M R+ TY
Sbjct: 364 MVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM-RDRSQLADVITY 422
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
SS++D L N ++ Q ++ +FK+
Sbjct: 423 SSLIDA---------------------------LCKNCHLDQAIA----------LFKKM 445
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
++I+ T ++ L K GR+K A +++ + +G + Y ++ CK
Sbjct: 446 ITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLF 505
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+E LL + + G IP A+ + + K + + E+LL ++ +GLL
Sbjct: 506 DEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L +L K R AI + + +GIT +N C Q +L +++RG
Sbjct: 75 ILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRG 134
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P + L+ + C +G+ K+ + V+ LD +L+ C + AI
Sbjct: 135 YHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAI 194
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
L +E+ DV Y++++D L K+ + EA ++ M ++ + ++ ++
Sbjct: 195 QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGF 254
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + L +A+ +EM PD T+ +I
Sbjct: 255 CIMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL 289
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 195/440 (44%), Gaps = 27/440 (6%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L +++D Y G D EV MMR G P++ CNALL L R + + L + MV
Sbjct: 177 LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV 236
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
G+SP+ +T+S + + C+ +F+ V++ + + G ++V YN++I + G
Sbjct: 237 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 296
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF +M L P TY ++++G + ++ + ++ M +L P + N
Sbjct: 297 EAFGFKKDM-EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN- 354
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A + K ++ T +++ L K G++ A + +
Sbjct: 355 -LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM--- 410
Query: 250 GITVRDS------DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
VRDS Y + + H ++ LL ++ G P S + C
Sbjct: 411 ---VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 467
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ ++ +LL + KGL ++F + L+ YC + A + K+ K+ D+ Y
Sbjct: 468 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 527
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH--LK--ELRKAMKNHDE 419
+ L+ GL K GR+EE+ + F M+E ++ + S L H LK +L A +
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNE---FTYSGLIHGYLKNGDLESAEQLVQR 584
Query: 420 MLKMGHKPDEATYKQVISGF 439
ML G KP++ Y ++ +
Sbjct: 585 MLDTGLKPNDVIYIDLLESY 604
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 189/436 (43%), Gaps = 45/436 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N +++ +R + + A L M G+SPN +T+S++ LC+SG+ E L
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476
Query: 105 LDSGIY-----SSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILD 156
L+ ++ +Y +I Y ++G+ A FD++ ++ N+ P Y+S++
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV----NVLPDLYCYNSLIF 532
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHF--------------LSGNDYVIQKLSDMG--- 199
G + + E S + M E+ LLP F L + ++Q++ D G
Sbjct: 533 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 592
Query: 200 ---------KTY-------AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++Y FK D+ + L + G ++ LS G ++ A ++
Sbjct: 593 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 652
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
I + G Y + ++ LCK E+ G+L ++ ++G P + + + C
Sbjct: 653 SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 712
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G + +++L KGL+ + +SL++ C I A L+ ++ + D Y
Sbjct: 713 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
VL G G +E+A+ + + M S SSF +V C ++++ +K ++
Sbjct: 773 SVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 832
Query: 424 GHKPDEATYKQVISGF 439
G P+ T + +ISG
Sbjct: 833 GLVPNALTIENIISGL 848
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 18/345 (5%)
Query: 103 GLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
L DSG S + ++++D Y K G A + + M R + P +++L R +
Sbjct: 165 ALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVV-LMMRDRGMAPSIRCCNALLKDLLRAD 223
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ ++ MV + P + S + + Y F A +E+++
Sbjct: 224 AMALLWKVREFMVGAGISPD---------VYTYSTLIEAYCKVREFDTAKKVLVEMRERG 274
Query: 223 CG-------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
CG ++ L + G V+EA + + G+ Y A +N LCK + E
Sbjct: 275 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 334
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ P + + + +G E +++ ++ G+ + +L+
Sbjct: 335 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 394
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C Q+D+A L ++ + D TY+++++G F+ ++A R+ M+ + +
Sbjct: 395 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 454
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC E KA +EM G KP+ Y +ISG+
Sbjct: 455 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 27/304 (8%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ + G VP +L+D + +I A LY M+ G++P+ F +S++
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779
Query: 93 CRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+G E + L++ G S +N ++D + K+G +L + GR L P
Sbjct: 780 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETL-KLLHVIMGRGLVPNA 838
Query: 149 STYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
T +I+ G K +EV V L QK S+ + + +
Sbjct: 839 LTIENIISGLSEAGKLSEVHTIFVELQ------------------QKTSESAARHFSSLF 880
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
KI L D M++ KEG + +A+ + +I + + S Y A V+ LC+
Sbjct: 881 MDMINQGKIPL--DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 938
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSF 326
+ + E LL+++ +RG P + + + G +E +L +L K L DS
Sbjct: 939 KGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDSK 998
Query: 327 CCSS 330
C+S
Sbjct: 999 FCNS 1002
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 156/379 (41%), Gaps = 41/379 (10%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG 108
LL++ ++ ++I S + +M+ GV + + ++ L SG F V+ G+ +G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659
Query: 109 IYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
V +Y+ +I K D AF L+EM + + P Y++++DG + +
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSK-KGVDPNIVCYNALIDGLCKSGDISYA 718
Query: 168 DRIVGLMVEKKLLPK-----HFLSGNDYVIQKLSDMGKTYA--AEMIFKRACDEKIELQD 220
+ ++ K L+P + G+ K+ D+ + EM+ +
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGS----CKVGDISNAFYLYNEMLATGITPDAFVYSV 774
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T GC S G +++A+ + + RG S + V+ CK + +E LL
Sbjct: 775 LTTGC-----SSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV 828
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK----------GLLLDSF---- 326
++ RG +P A+ + ++ GK EV + + K L +D
Sbjct: 829 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 888
Query: 327 ----CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
++ +C +DKA+ L I + ++Y ++D L + G++ EA+ +
Sbjct: 889 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 948
Query: 383 FDYMKELKVVSSSSFVIVV 401
M + + S + +++
Sbjct: 949 LKEMDKRGICPSENQCLIL 967
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 273 EVCGLLRDVVERGYIP----CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
EV ++RD RG P C L + + WK E ++ A G+ D +
Sbjct: 195 EVVLMMRD---RGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA----GISPDVYTY 247
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
S+L+E YC R+ D A + +++ + L+ TY+VL+ GL + G +EEA M++
Sbjct: 248 STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMED 307
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+V ++ +++ LC + +A DEM KP+ Y +I GFM
Sbjct: 308 YGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 360
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 192/404 (47%), Gaps = 23/404 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P + N ++ AL + +I A + M +P+ FT+S + LC+ + +
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 102 LGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LLD + + V +N++ID SK GD A ++ M + P TY++++
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMF-LKGCVPNEVTYNTLIH 311
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACD 213
G K + + ++ MV K +P G N V Q+ ++ G M +
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM------E 365
Query: 214 EKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
E+ + ++ ++ L KEG+ + A++++ ++E+G Y AF++ LC++ +P+
Sbjct: 366 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 425
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E +L++++ +G++P A S + KG ++ + ++ + + + CCS L+
Sbjct: 426 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 485
Query: 333 EYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
C + ++ +A+ + H+ E LK DV Y ++ GL G +++ +++F M+ +
Sbjct: 486 NGLCESGRLREALTVWTHMLGEGLKP--DVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543
Query: 391 VVSSSSFV---IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
S V I+ + LC L +A+ + ML G PD T
Sbjct: 544 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 587
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 166/422 (39%), Gaps = 64/422 (15%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G +P N L+DAL + ++ A+ L M G PN+ T++ + LC GK
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318
Query: 98 FEVVLGLLDSGIYS-----SVMYNLVID----------------------------FYS- 123
+ L LL+ + S V Y +I+ YS
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 378
Query: 124 ------KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
K+G A EM + P Y + +DG R EK + ++ I+ M+ K
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
LP F + +++ G + A +++K + + C +L L + GR++
Sbjct: 438 GFLPNAFTYSS--LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495
Query: 238 EAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV--VERGYIPCAMELS 294
EA+ ++ H++ E G+ Y + + LC ++ L ++ E P + +
Sbjct: 496 EALTVWTHMLGE-GLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 554
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C + +LL+++LD+G DS C+ I L E++
Sbjct: 555 ILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN---------------IFLETLRERI 599
Query: 355 KGSLDVATY-DVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRK 412
D + D L+ L K R A+RI + M S++ V+ R C K +R+
Sbjct: 600 NPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 659
Query: 413 AM 414
+
Sbjct: 660 TI 661
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I+ L +G+ A F+ + T ++ L KE RV EA+ + +
Sbjct: 202 NLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA 261
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G + ++ L K L+ ++ +G +P + + + C KGK +
Sbjct: 262 EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 321
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
LL ++ + + +++ R+ + + + + +E+ + Y L+
Sbjct: 322 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 381
Query: 369 GLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GLFK+G+ E AVR++ M E VV +F+ LC ++ +A EML G
Sbjct: 382 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFI---DGLCRDEKPDEAEDILQEMLSKG 438
Query: 425 HKPDEATYKQVISGFM 440
P+ TY ++ GF
Sbjct: 439 FLPNAFTYSSLMKGFF 454
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+G+ P + + + + C G+ + + K D F S+LM C R++D+
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVV 401
A+ L +++ + T++VL+D L K+G + A ++ D M LK V + ++ ++
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMF-LKGCVPNEVTYNTLI 310
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC +L KA+ ++M+ P++ TY +I+G +
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 178/406 (43%), Gaps = 10/406 (2%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAM-VRDGVSPNKFTWSLVAQILCRSGKF 98
++G +P CN LL L + A LYG M VR+G + ++ ++ + LC G+
Sbjct: 39 LHGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREG-GADDYSTCVMVRGLCLEGRV 97
Query: 99 EVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
E GL+++ + +V YN++ID Y ++GD G L EM + + P TY +
Sbjct: 98 EEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEM-ETKGIIPTVVTYGA 156
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
I+ R + ++G M + L P + + VI L A + +
Sbjct: 157 IIHWLGRKGDLTKVESLLGEMRARGLSPN--VQIYNTVINALCKCRSASQASDMLNQMVK 214
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ T M+ +EG V+EA+++ RG+ Y ++ C +
Sbjct: 215 SRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMV 274
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
LL +++ RG+ P + L + G+ + + + ++ ++ D+ + L+
Sbjct: 275 ASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLIS 334
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C R + A L ++ + K D Y L+DG + ++ +A +IF++M+E
Sbjct: 335 GLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPD 394
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ C +++A+ M K G PDE TY ++ G+
Sbjct: 395 IVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 149/356 (41%), Gaps = 13/356 (3%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P V N +++AL + AS + MV+ +P+ T++ + CR G
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236
Query: 98 FEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L LL I + + Y +I + +G+ A D L EM GR TP T
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMM-GRGHTPDMITLG 295
Query: 153 SILDGARRYEKTEVSDRIV--GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+++ G +V+D ++ M E++++P + + +I L AA+ + +
Sbjct: 296 ALIHGL--VVSGQVNDALIVREKMAERQVMPDANIY--NVLISGLCKKRMLSAAKNLLEE 351
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++K++ ++ + ++ +A +I+ + E+ + Y + CK
Sbjct: 352 MLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVA-YNVMIKGYCKFGM 410
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+E + + + G IP + V KG LL ++ + + F +S
Sbjct: 411 MKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYAS 470
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L+ YC+ A L K++ +V Y VL+ LFK ++ +A F++M
Sbjct: 471 LICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHM 526
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 139/352 (39%), Gaps = 24/352 (6%)
Query: 7 GRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GR D ++L ++ G D L V M +P + N L+ L ++ +
Sbjct: 284 GRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLS 343
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVMYNLVID 120
A L M+ V P+KF ++ + RS K ++ + + V YN++I
Sbjct: 344 AAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIK 403
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G A ++ M P TY++++DG + S R++ M++++
Sbjct: 404 GYCKFGMMKEAVTCMSSM-RKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCK 462
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + +I ++G TY+AE +F + E + ++ +L K+ +V +A
Sbjct: 463 PNIFTYAS--LICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAA 520
Query: 241 QIYHLISERGITVRDSDYYAFVNVL--CKE-------------HQPEEVCGLLRDVVERG 285
+ + D+ + VN L C+ H+ + + R ++ G
Sbjct: 521 AYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDG 580
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
P + + S C + +L + +KG L D SL+ + S
Sbjct: 581 LDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSS 632
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 195/456 (42%), Gaps = 46/456 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD-GVSPNKFT 84
G + L+V+ M V G V V+ N L+D ++ + ++ +V+D V PN T
Sbjct: 200 GDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVT 259
Query: 85 WSLVAQILCRSGKFE-----------------------VVLGLLDSG------------- 108
++++ LC+ G+F+ ++ GL ++G
Sbjct: 260 YNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV 319
Query: 109 ----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ +V +N +++ + + G +F+ M G+ +Y+ ++ G K
Sbjct: 320 ESSLVVDAVTHNAMLNGFCRAGKIKESFELW--MVMGKENCQTVVSYNILIKGLFENGKV 377
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E + I L+ +K P+ G +I L G+ A IFK A D +L
Sbjct: 378 EEAISIWELLCKKGCRPESTTYG--VLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYS 435
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M+ L KEGR+ EAI I + + +RG + +N + + E+ R++ +
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + + C ++ E + +L+K D CS LM+ C ++I+ A
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+ L + D+ Y++L+ GL ++E+A++++ +MK V + + ++
Sbjct: 556 LNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEG 615
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +++ KA + D +LK G PD +Y I G
Sbjct: 616 LYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 196/476 (41%), Gaps = 55/476 (11%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ D V+ Y+ + L+ ++ M+ ++G P V + N LL+A NE A
Sbjct: 79 KEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESF 138
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----------------------- 106
VSPN T++++ +I C+ + E + LLD
Sbjct: 139 SRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVK 198
Query: 107 ----------------SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G+ + V YN++ID + K GD+ + + ++ P
Sbjct: 199 VGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVV 258
Query: 150 TYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
TY+ +++G R E E+ +R+ EK + L I L + G A
Sbjct: 259 TYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSL------IHGLCEAGNIDGAV 312
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++K + + + T ML + G++KE+ +++ ++ + S Y + L
Sbjct: 313 RVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVS-YNILIKGL 371
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + EE + + ++G P + + C G+ + ++ D LD+
Sbjct: 372 FENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDA 431
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ SS+++ C ++D+AI++ +++K LD + L++G + ++E+A+ F
Sbjct: 432 YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFRE 491
Query: 386 MKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E K S + S+ ++ LC + +A EML+ KPD T ++ G
Sbjct: 492 M-ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L++Y M+ VP + N L++ LY+ + AS ++ +++DG+ P+ ++++
Sbjct: 589 DALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITI 648
Query: 90 QILCR----SGKFEVVLGLLDSGIY-SSVMYNLVI 119
+ LC S E + L+ GI ++V +N+++
Sbjct: 649 KGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK-GLLLDSFCC-------SSL 331
D+V+ PC +++ V K K + + LD + D F C ++L
Sbjct: 69 DIVKAQKCPCKEDVALTVIKAYAKNK------MSNKALDTFQNMQDIFGCKPGVRSYNTL 122
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ + + D+A + E + S ++ TY++L+ K ++E+A+ + D+M +
Sbjct: 123 LNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNL 182
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ +++ + + +L A+K DEM G D Y +I GF
Sbjct: 183 KPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGF 231
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 181/403 (44%), Gaps = 13/403 (3%)
Query: 41 YGFVPAVSACNALLDALYRQNE-IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
YG V V +CNA L + +E I +A ++ G+S N +++++ LCR GK +
Sbjct: 219 YGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVK 275
Query: 100 VVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
LL S V Y+ VID Y G+ A +++M + L P TY+SI
Sbjct: 276 EAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM-QIKGLKPNRYTYNSI 334
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ + K+ +++++ M+ +K++P + + +I +G A F +
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT--LIHGFFKLGHVRTANKWFDEMLSK 392
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
KI T +++ + G+V E ++H + RG+ + Y ++V CK +
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++V+ G P + + C G+ ELL + KGL L+ +S++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
C I++AI L ++E D TY ++D + G +++A ++ M + + +
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 395 -SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+F ++++ C L L + ML+ G PD TY ++
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 172/409 (42%), Gaps = 48/409 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V R M +P L+ ++ +R A+ + M+ +SP+ T++ + Q
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 93 CRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ GK L I V Y +ID Y K G+ AF NEM +TP
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQ-MGMTPN 467
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY +++DG ++ + + ++ ++ M +K L
Sbjct: 468 IVTYGALIDGLCKHGELDTANELLDEMRKKGL---------------------------- 499
Query: 208 FKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
Q + C M+ + K G +++AI++ + GI Y ++
Sbjct: 500 -----------QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+ ++ LL+++++RG P + + + C G ++ + LL +L+KG++ D+
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++LM+ +C ++ ++ ++ + D TY++L+ G K ++EA ++
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
M E V + +S+ ++ R K++ +A + +EM G D Y
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 13/293 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y G ++ ++ M G P + AL+D L + E+ A+ L M +
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ N ++ + +C++G E + L+ +GI ++ Y VID Y + GD
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L EM + R L P T++ +++G E DR++G M+EK ++P ++ N
Sbjct: 557 AHKLLQEMLD-RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA-ITYNTL 614
Query: 191 VIQKL--SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ Q + M T I+KR ++ + +T ++K K +KEA +Y + E
Sbjct: 615 MKQHCIRNSMNTTTK---IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+G + Y A + K+ + E L ++ G + E+ F C
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADG-EIYNFFVDMC 723
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + F G E +LL +L GL++ C++ + +N + I +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE---GIEM 244
Query: 348 HIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS----SFVIVVS 402
IK+ G S + +Y++++ L + G+++EA R+ + ++ SS+ S+ V+
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRL---LMQMDFRSSTPDVVSYSTVID 301
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
CHL EL+KA+K D+M G KP+ TY +I
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSII 335
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 191/427 (44%), Gaps = 9/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++C+ GL V+ + G+VP L+ L + +I+ A + +V
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDFGA 130
G ++ ++ + LC+ G+ L LL D + VMYN +ID K
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AFD +EM + + ++P TYS+++ G K + + M+ + + P + +
Sbjct: 244 AFDLFSEMIS-KGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTF--NI 300
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ GK + +F + I+ T ++ V +A I++ +++ G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y +N CK + +E L +++ + IP + S + G+
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L+ + D+G+ +S+++ C Q+DKAIAL K++ ++ TY +L+ GL
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Query: 371 FKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ G++E+A ++F+ + + ++ ++ I++ C +A+ +M G PD
Sbjct: 481 CQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540
Query: 430 ATYKQVI 436
TY+ +I
Sbjct: 541 KTYEIII 547
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 157/347 (45%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D++ + + A L+ M+ G+SP+ T+S + C GK + L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I ++ +N++++ + K G + +M + + P F TY+S++DG
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEG-KTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + I M + + P + +I + K A +FK + I
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPD--IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ LSK GR+ A+Q+ + +RG+ Y + ++ LCK HQ ++ LL
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ ++G P S + C GK ++ ++ +L KG L+ + +++ +C
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEG 519
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++A+AL K+E D TY++++ LFK + A ++ M
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 186/430 (43%), Gaps = 14/430 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SLV + H L++ + M G P + CN L++ + I A ++ +++
Sbjct: 94 SLVKSKHYHTVLYLS-----QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGA 130
G P+ T++ + + LC G+ + D + + + Y +I K G+ A
Sbjct: 149 MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L + +G + P Y++I+D + + + + M+ K + P +
Sbjct: 209 ALDLLQRV-DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPD--VVTYSA 265
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +GK A +F + E I+ T ++ A K+G++KE ++ ++ ++G
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + ++ C + + + + + G P S + C K+ E
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + K ++ D SSL++ + +I A+ L ++ + TY+ +LD L
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K ++++A+ + +K+ + + ++ I++ LC +L A K + +L GH +
Sbjct: 446 CKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNV 505
Query: 430 ATYKQVISGF 439
TY +I GF
Sbjct: 506 DTYTIMIQGF 515
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 8/280 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ + G +G V+ MM G P N+L+D E+ A ++ M
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
+ GV+P+ ++S++ C+ KF+ + L + I V Y+ +ID SK G
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +++M + R + P TY+SILD + + + + ++ + +K + P +
Sbjct: 417 SYALQLVDQM-HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYS- 474
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I+ L GK A +F+ + L DT M++ EG EA+ + + +
Sbjct: 475 -ILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMED 533
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
G Y + L K+ + + LLR+++ RG P
Sbjct: 534 NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/413 (18%), Positives = 174/413 (42%), Gaps = 25/413 (6%)
Query: 41 YGFVPAVSA------CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
+ F+P S+ ++ + N++ A L+ ++R +P F ++ + L +
Sbjct: 38 FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97
Query: 95 SGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
S + VL L + + NLV I+ + + G AF ++ P
Sbjct: 98 SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK-MGYVPDTI 156
Query: 150 TYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLS-GNDYVIQKLSDMGKTYAA 204
T+++++ G + + D++V L HF +I L +G+T AA
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGF-------HFDQISYGTLIHGLCKVGETRAA 209
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ +R ++ ++ ++ K V EA ++ + +GI+ Y A ++
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISG 269
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C + + L ++ P + V + C GK KE + + ++ +G+ +
Sbjct: 270 FCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+SLM+ YC ++++KA ++ + + + D+ +Y ++++G K + +EA+ +F
Sbjct: 330 FVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M ++ ++ ++ L + A++ D+M G P TY ++
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D S G L++ M G P + N++LDAL + +++ A L +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
G+ PN +T+S++ + LC+SGK E V GLL G +V Y ++I + +G F
Sbjct: 464 KGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNE 523
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
A L++M P TY I+ + ++ +++++++ M+ + + P+
Sbjct: 524 ALALLSKM-EDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 192/404 (47%), Gaps = 23/404 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P + N ++ AL + +I A + M +P+ FT+S + LC+ + +
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 102 LGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LLD + + V +N++ID SK GD A ++ M + P TY++++
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMF-LKGCVPNEVTYNTLIH 287
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACD 213
G K + + ++ MV K +P G N V Q+ ++ G M +
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM------E 341
Query: 214 EKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
E+ + ++ ++ L KEG+ + A++++ ++E+G Y AF++ LC++ +P+
Sbjct: 342 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 401
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E +L++++ +G++P A S + KG ++ + ++ + + + CCS L+
Sbjct: 402 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 461
Query: 333 EYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
C + ++ +A+ + H+ E LK DV Y ++ GL G +++ +++F M+ +
Sbjct: 462 NGLCESGRLREALTVWTHMLGEGLKP--DVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519
Query: 391 VVSSSSFV---IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
S V I+ + LC L +A+ + ML G PD T
Sbjct: 520 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 563
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 166/422 (39%), Gaps = 64/422 (15%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G +P N L+DAL + ++ A+ L M G PN+ T++ + LC GK
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294
Query: 98 FEVVLGLLDSGIYS-----SVMYNLVID----------------------------FYS- 123
+ L LL+ + S V Y +I+ YS
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 354
Query: 124 ------KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
K+G A EM + P Y + +DG R EK + ++ I+ M+ K
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
LP F + +++ G + A +++K + + C +L L + GR++
Sbjct: 414 GFLPNAFTYSS--LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471
Query: 238 EAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV--VERGYIPCAMELS 294
EA+ ++ H++ E G+ Y + + LC ++ L ++ E P + +
Sbjct: 472 EALTVWTHMLGE-GLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 530
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C + +LL+++LD+G DS C+ I L E++
Sbjct: 531 ILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN---------------IFLETLRERI 575
Query: 355 KGSLDVATY-DVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRK 412
D + D L+ L K R A+RI + M S++ V+ R C K +R+
Sbjct: 576 NPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 635
Query: 413 AM 414
+
Sbjct: 636 TI 637
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I+ L +G+ A F+ + T ++ L KE RV EA+ + +
Sbjct: 178 NLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA 237
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G + ++ L K L+ ++ +G +P + + + C KGK +
Sbjct: 238 EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 297
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
LL ++ + + +++ R+ + + + + +E+ + Y L+
Sbjct: 298 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 357
Query: 369 GLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GLFK+G+ E AVR++ M E VV +F+ LC ++ +A EML G
Sbjct: 358 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFI---DGLCRDEKPDEAEDILQEMLSKG 414
Query: 425 HKPDEATYKQVISGFM 440
P+ TY ++ GF
Sbjct: 415 FLPNAFTYSSLMKGFF 430
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+G+ P + + + + C G+ + + K D F S+LM C R++D+
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVV 401
A+ L +++ + T++VL+D L K+G + A ++ D M LK V + ++ ++
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMF-LKGCVPNEVTYNTLI 286
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC +L KA+ ++M+ P++ TY +I+G +
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 187/431 (43%), Gaps = 11/431 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++ Y L + ++ M GFVP V ACN +L+ L + LY M
Sbjct: 193 FEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMG 252
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFG 129
R GV N +T++++ +LCR G + G L + G V+ YN +ID Y ++G
Sbjct: 253 RIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLE 312
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF L ++ R + P +Y+S++ G R + + ++ M+++ + P L
Sbjct: 313 DAF-YLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT- 370
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A + I TC +++ +EGR+ A+ + I +
Sbjct: 371 -LIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKL 429
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+TV Y + LC+E +P LL ++E + P + ++ + S C E
Sbjct: 430 GVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEA 489
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCS-NRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++++ + SL+ C NR +D L +++ + + D L++
Sbjct: 490 LLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGE-GLMVEMVESEVIPDHEICRALVN 548
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K+G ++A + + ++ + S SF +V + K M+ D MLK G P
Sbjct: 549 GYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLP 608
Query: 428 DEATYKQVISG 438
+ T + +I G
Sbjct: 609 NSLTCRYIIHG 619
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 190/404 (47%), Gaps = 17/404 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A NAL++ + N I A+ + M SP+ T++++ LC GK ++ L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 105 L-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L D+ + + Y ++I+ +G A ++EM + R L P TY++I+ G
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIRGMC 274
Query: 160 RYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K + DR ++ +E K +S N +++ L + GK E + + EK +
Sbjct: 275 ---KEGMVDRAFEMVRNLELKGCEPDVISYN-ILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ L ++G+++EA+ + L+ E+G+T Y + C+E + +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L ++ G +P + + +A+ C GK + E+ + + G +S +++ S
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 338 NRQIDKAIALHIKIEKLKGSLDV--ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS- 394
+ DK ALH+ +E + +D TY+ ++ L ++G ++EA + M+ + S
Sbjct: 451 SG--DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ IV+ C + A+ + M+ G +P+E TY +I G
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ K R+ +A ++ + + + Y + LC + + +L ++
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + + +G E +L+ +L +GL D F ++++ C +D+A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 346 ALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSR 403
+ +E LKG DV +Y++LL L G+ EE ++ M K + ++ I+++
Sbjct: 284 EMVRNLE-LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC ++ +AM M + G PD +Y +I+ F
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 14/272 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G+ E+ R + + G P V + N LL AL Q + L M + PN T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+S++ LCR GK E + LL + G+ + Y+ +I + ++G A + L M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ L P Y+++L + K + + I G + E P S + + L G
Sbjct: 396 SDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS--SSYNTMFSALWSSG 452
Query: 200 -KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-- 256
K A MI + + I+ + T M+ L +EG V EA ++ L+ R S
Sbjct: 453 DKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFEL--LVDMRSCEFHPSVV 509
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
Y + CK H+ E+ +L +V G P
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + E LL ++ KG D C+ L++ + + R I KA+ + +EK G DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF-GQPDV 158
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
Y+ L++G K R+++A R+ D M+ + ++ I++ LC +L A+K ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 420 MLKMGHKPDEATYKQVISGFM 440
+L +P TY +I M
Sbjct: 219 LLSDNCQPTVITYTILIEATM 239
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
RD+ + C+ E LL +V +GY P + ++ + G + + + +
Sbjct: 88 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIK---GFFTLRNIPKAV 144
Query: 314 SA--VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L+K D F ++L+ +C +ID A + ++ S D TY++++ L
Sbjct: 145 RVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
G+++ A+++ + + + ++ I++ + +A+K DEML G KPD
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 431 TYKQVISG 438
TY +I G
Sbjct: 265 TYNTIIRG 272
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE++ + G P S+ N + AL+ + A + M+ +G+ P++ T++ +
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 91 ILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LCR G FE+++ + + SV+ YN+V+ + K A + L M G
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV-GNGCR 540
Query: 146 PGFSTYSSILDG----ARRYEKTEVSDRIV 171
P +TY+ +++G R E E+++ +V
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ G + + + ++M+ G P + + L+ A R+ + +A M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
DG P+ ++ V LC++GK E+ L + G +S YN + GD
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 131 AFDRLNE-MCNGRNLTPGFSTYSSIL 155
A + E M NG + P TY+S++
Sbjct: 457 ALHMILEMMSNG--IDPDEITYNSMI 480
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 206/471 (43%), Gaps = 69/471 (14%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + + G +P+V A N +L L R+ ++ A ++ M +D +PN
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APN 411
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC++G+ E L + D+ G++ ++M N++ID K +L+
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKA-------QKLD 464
Query: 137 EMC------NGRNLTPGFSTYSSILDGARR----------YEKTEVSDRIVGLMVEKKLL 180
E C + + +P T+ S++DG R YEK SD+I ++V L+
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------- 229
F G + D K Y EM+ R C + L + C+ KA
Sbjct: 525 QNFFKCG------RKEDGHKIYK-EMV-HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576
Query: 230 --------------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
L K G +E ++++ + E+G+ + Y ++ CK
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ LL ++ +G P + V + E L G+ L+ S
Sbjct: 637 KVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYS 696
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
SL++ + +ID+A + ++ + + + T++ LLD L K ++EA F MK L
Sbjct: 697 SLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNL 756
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K ++ ++ I+++ LC +++ KA EM K G KP+ TY +I+G
Sbjct: 757 KCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGL 807
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 181/432 (41%), Gaps = 28/432 (6%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
SHK + V MMR + F PA SA L+ AL N L+ M G N
Sbjct: 181 SHK--LKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANV 238
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNE 137
++ + ++ R G+ + L LLD +S V+YN+ ID + K G A+ +E
Sbjct: 239 HLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHE 298
Query: 138 MCNGRNLTPGFSTYSS---ILDGARRYEKTEVSDRIVGLMVEKKL---LPKHFLSGNDYV 191
M + L P TY++ +L ARR D V L E L +P + + +
Sbjct: 299 M-KAQGLVPDDVTYTTLIGVLCKARRL------DEAVELFEELDLNRSVPCVY--AYNTM 349
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I GK A + +R + C+L L ++G+V+EA++I+ + +
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA 409
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y +++LCK + E + + E G P M ++ + C K E
Sbjct: 410 P-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ + K DS SL++ ++D A +L+ K+ +V Y L+ F
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFF 528
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL-CHLK--ELRKAMKNHDEMLKMGHKPD 428
K GR E+ +I+ M + S +++ S + C K E+ K +E+ G PD
Sbjct: 529 KCGRKEDGHKIYKEM--VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPD 586
Query: 429 EATYKQVISGFM 440
+Y +I G +
Sbjct: 587 VRSYSILIHGLV 598
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 148/360 (41%), Gaps = 43/360 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y+ M G P + N+ +D +++ E+ L+ + G+ P+ ++S++
Sbjct: 535 DGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILI 594
Query: 90 QILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L ++G +++ + + G++ V+ YN VID + K G A+ L EM + L
Sbjct: 595 HGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM-KTKGL 653
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY S++DG L+ + + A
Sbjct: 654 QPTVVTYGSVVDG-------------------------------------LAKIDRLDEA 676
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M+F+ A ++L ++ K GR+ EA I + ++G+T + ++
Sbjct: 677 YMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K + +E +++ P AM S + C K+ + + +GL +
Sbjct: 737 LVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPN 796
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++++ + +A L + + G D A Y+ +++GL + +A +F+
Sbjct: 797 NITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFE 856
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 191/463 (41%), Gaps = 53/463 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++ +DC+ G + + M+ G VP L+ L + + A L+ +
Sbjct: 277 NVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDL 336
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ P + ++ + +GKF+ LL+ I S + YN ++ +KG
Sbjct: 337 NRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE 396
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +EM ++ P +TY+ ++D + + E + ++ M E L P + +
Sbjct: 397 ALRIHDEM--RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPN--IMTVNI 452
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC-MLKALSKEGRVKEAIQIYHLISER 249
+I +L K A IF D K+ D C ++ L + GRV +A +Y + +
Sbjct: 453 MIDRLCKAQKLDEACSIF-LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS 511
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR-----FVASQCGKG 304
Y + + K + E+ + +++V RG P M L+ F A + KG
Sbjct: 512 DQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKG 571
Query: 305 KW------------------------------KEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ +E +L + ++GL LD +++++
Sbjct: 572 RALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDG 631
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELK 390
+C + ++DKA L +++ V TY ++DGL K R++EA +F+ K +L
Sbjct: 632 FCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLN 691
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
VV SS + ++ + E + +E+++ G P+ T+
Sbjct: 692 VVIYSSLIDGFGKVGRIDEAYLIL---EELMQKGLTPNSYTWN 731
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 146/379 (38%), Gaps = 41/379 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ +DC G G ++ ++ G VP V + + L+ L + R L+ M
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G+ + ++ V C+SGK + A+
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVD------------------------------KAYQL 644
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDYVIQ 193
L EM + L P TY S++DG + ++ D L E K + + +I
Sbjct: 645 LEEM-KTKGLQPTVVTYGSVVDGLAKIDRL---DEAYMLFEEAKSIGVDLNVVIYSSLID 700
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+G+ A +I + + + T C+L AL K + EA + + +
Sbjct: 701 GFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP 760
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N LC + + +++ ++G P + + +A G E L
Sbjct: 761 NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLF 820
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE--KLKG-SLDVATYDVLLDGL 370
G + DS C ++++E S +KA+ +I E +LKG ++ T VLLD L
Sbjct: 821 DRFKASGGVPDSACYNAMIEGLSS---ANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877
Query: 371 FKDGRMEEAVRIFDYMKEL 389
K +E+A + ++E+
Sbjct: 878 HKADCLEQAAIVGAVLREM 896
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 188/411 (45%), Gaps = 24/411 (5%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMV-RDGVSPNKFTWSLVAQILCRSGKFE 99
+ P+ + N +L A R + LY MV RD V P FT+S+ A+ LCR G+ +
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRAD 189
Query: 100 VVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLTPGFST 150
L +L S + +V+Y VI +G A L+EM C+ +T
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSA-----DVNT 244
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++ I+ G + + R+V M+ + +P G ++++ L + A + R
Sbjct: 245 FNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYG--FLLKGLCLASQVEEARTMLGR 302
Query: 211 ACDEKIELQDDTCG-CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + L + G C+L +G++KEA ++Y + +G Y ++ LCK
Sbjct: 303 VPELNVVLFNTVIGRCLL-----DGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLG 357
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ LLR++ ++G+ P + + + S C G W + +L + DKGL ++ +
Sbjct: 358 RLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYN 417
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++ C +R++D A+ +++ D+ TY+ ++ L + +MEEA +F+ +
Sbjct: 418 GMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE 477
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV+++ ++ ++ L + A+ ++M+ G D +Y +I
Sbjct: 478 GVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKAL 528
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 177/412 (42%), Gaps = 5/412 (1%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L + R M +G VP ++ AL Q + A+ L M G S + T++ +
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIV 249
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
LC G+ L+D + + N + + KG A+ GR
Sbjct: 250 HGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV 309
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIF 208
+++++ K + + + M K P H S +I L +G+ +A +
Sbjct: 310 LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYS---ILIHGLCKLGRLGSAMKLL 366
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ D+ T +L + + G + ++S++G+++ Y + +CK+
Sbjct: 367 REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKD 426
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ ++ ++++ +GY P + + C + +E E L +L +G++ ++
Sbjct: 427 RRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITY 486
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
++L+ N AI+L + SLD+ +Y+ L+ L +DG ++ ++ + M E
Sbjct: 487 NTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAE 546
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ S+ +++S LC + +R A++ EML PD TY +I+G
Sbjct: 547 KGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGL 598
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 174/433 (40%), Gaps = 44/433 (10%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLG 103
V+ N ++ L +R A+ L M+ G PN T+ + + LC + + E +LG
Sbjct: 242 VNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLG 301
Query: 104 LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
+ + V++N VI G A + L E + P TYS ++ G + +
Sbjct: 302 RVPE--LNVVLFNTVIGRCLLDGKLKEAAE-LYETMGSKGCPPDAHTYSILIHGLCKLGR 358
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ +++ M +K P + ++ G + + D+ + + +
Sbjct: 359 LGSAMKLLREMEDKGFAPS--IVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGY 416
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
M+ A+ K+ R+ +A++ + +G Y + LC +Q EE L +++
Sbjct: 417 NGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLH 476
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G + A+ + + + G W++ L + ++ G LD + L++ C + +D+
Sbjct: 477 EGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDR 536
Query: 344 AI---------------------------------ALHIKIEKLKGSL--DVATYDVLLD 368
+I AL + E L L D+ TY+ L++
Sbjct: 537 SIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLIN 596
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K G M A+ + + + V + ++ I++S C + L A + + G P
Sbjct: 597 GLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITP 656
Query: 428 DEATYKQVISGFM 440
+E T+ ++ F+
Sbjct: 657 NERTWGIMVQNFV 669
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 152/353 (43%), Gaps = 14/353 (3%)
Query: 26 GLFMDGL----EVYRMMRVYGFVPAVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVS 79
G + GL +V + G VP ++ N ++ +++ A+ LY M G
Sbjct: 281 GFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCP 340
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDR 134
P+ T+S++ LC+ G+ + LL D G S V Y +++ + + G +
Sbjct: 341 PDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAM 400
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L E+ + + L+ Y+ ++ + + + + R + M + P + + +I
Sbjct: 401 L-EVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPD--ICTYNTIIYH 457
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L + + AE +F+ E + T ++ AL + G ++AI + + + G ++
Sbjct: 458 LCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLD 517
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + LC++ + LL ++ E+G P + + ++ C + ++ EL
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+L++ L D ++L+ C + A+ L K+ D+ TY++L+
Sbjct: 578 EMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILI 630
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + + ++ G + D + + M ++G + + N L+ AL R +
Sbjct: 477 EGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDR 536
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVID 120
+ L M G+ PN +++L+ LC++ + E+ +L+ + V YN +I+
Sbjct: 537 SIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLIN 596
Query: 121 FYSKKGDFGAAFDRLNEMCN 140
K G AA + L ++ N
Sbjct: 597 GLCKMGWMHAALNLLEKLHN 616
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 197/453 (43%), Gaps = 57/453 (12%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+Y M+ P V N+L+ + AS L+ V G++ N FT++ + L
Sbjct: 385 EIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWL 443
Query: 93 CRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ GK + + G+ SV+ YN +I + ++GD +A EM + L P
Sbjct: 444 CKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE-KGLKPN 502
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++DG + TE + + M + + P F + +I L G+T ++
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTC--NIIINGLCKAGRTSESQDR 560
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K+ E T C++ KEG V A+ +Y + + G++ Y +N CK
Sbjct: 561 LKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCK 620
Query: 268 EHQPEEVCGLLRDVVERG-----YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ + ++ ++ +G + CA+ + C KG +LLS + + GL
Sbjct: 621 SNNMDLALKVMDEMKNKGIELDVTVYCAL-----IDGFCRKGDMVNASQLLSELQEVGLS 675
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALH----------------------IKIEKL------ 354
+ SS++ + + ++ A+ LH +K KL
Sbjct: 676 PNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASEL 735
Query: 355 ------KGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHL 407
KG + D+ TY VL+ GL G++E A +I + M + K ++ + F+ H
Sbjct: 736 YAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM-DRKCMTPTVFIYNTLITGHF 794
Query: 408 KE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
KE L++A + H+EML G PD+ TY +++G
Sbjct: 795 KEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 203/479 (42%), Gaps = 51/479 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + A S+V++ K + L + R MR G+VP ++ +Q ++
Sbjct: 253 KGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLE 312
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVID 120
A + G M+ G N + + + C+ G + L L D +GI ++V Y ++I+
Sbjct: 313 AVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIE 372
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEK-TEVSDRIVGL--- 173
+ K G+ A++ N+M N ++++P +S++ G AR E+ +++ D V
Sbjct: 373 WCCKNGNMDKAYEIYNQMKN-KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA 431
Query: 174 ---------------------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
MV K + P +S N+ ++ G +A
Sbjct: 432 NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPS-VVSYNNMILGHCQQ-GDMDSANG 489
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F ++ ++ T ++ K+G + A +Y + I D +N LC
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC 549
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + E L+ +V+ G+IP M + + +G + + + G+ + F
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF 609
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L+ +C + +D A+ + +++ LDV Y L+DG + G M A ++ +
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669
Query: 387 KEL-----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+E+ KVV SS ++S L+ + A+ H M+ G D Y +ISG +
Sbjct: 670 QEVGLSPNKVVYSS----MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLL 724
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 132/340 (38%), Gaps = 78/340 (22%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF+P N ++D ++ + A +Y M + GVSPN FT++ + C+S ++
Sbjct: 568 GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLA 627
Query: 102 LGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L ++D GI V +Y +ID + +KGD A L+E+ L+P YSS++
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL-QEVGLSPNKVVYSSMIS 686
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R+ + E AA + KR +E I
Sbjct: 687 GFRKLQNME-------------------------------------AALHLHKRMINEGI 709
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
++ L KEG++ A ++Y + +GI Y ++ LC + Q E
Sbjct: 710 PCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQK 769
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+L D+ + P + + +G +E L + +LDKGL+ D
Sbjct: 770 ILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD----------- 818
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
TYD+L++G KDG +
Sbjct: 819 ------------------------TTYDILVNGKVKDGNL 834
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/483 (20%), Positives = 191/483 (39%), Gaps = 49/483 (10%)
Query: 1 MIQSCEGRDSQSDA--LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+I+S D +SD+ + +L+ Y D ++ + + VP ++ N L L
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFT---------------------------------- 84
+ N IR A +Y M GV + T
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260
Query: 85 -WSLVAQILCRSGKFEVVLGLL----DSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
+S+V + +C+ LGLL D G + V++ VI K+G A EM
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320
Query: 139 CN-GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
+ G+ + +T +++ G + + + + M E + P + +I+
Sbjct: 321 LSCGKPMNVVVAT--TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYA--VIIEWCCK 376
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G A I+ + ++ I +++ K +EA +++ GI
Sbjct: 377 NGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFT 435
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + ++ LCKE + E C + +V +G P + + + C +G + +L
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+KGL + S LM+ Y + A L+ ++ + T +++++GL K GR
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTS 555
Query: 378 EAV-RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
E+ R+ ++E + + ++ ++ + A+ + EM K+G P+ TY +I
Sbjct: 556 ESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLI 615
Query: 437 SGF 439
+GF
Sbjct: 616 NGF 618
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 179/404 (44%), Gaps = 46/404 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P V A++ AL +N + A M ++PN T++++ LC+ G+ +
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 102 LGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ LL + ++V YN +I K A+D L EM P TY++++ G
Sbjct: 101 VALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLITG 159
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ +K++ + R+ +V + P D V TY+
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRP-------DVV---------TYS-------------- 189
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCG 276
C++ L KEGR+KEAI ++ + + G + ++ Y + ++ C+ + +E
Sbjct: 190 -------CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL + E G P + + + C + + +LL+ + KGL D +SLM+ C
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
++ A+ + ++ + S V TY+ +LDG + ++EEA + ++E+ +
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVV 360
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
SF I++ LC + +AM+ +E + PD Y VI G
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 26/289 (8%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKFTWSLV 88
D L V+ + GF P V + L+D L ++ ++ A L+G M++ G PN T++ +
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 89 AQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
CR GK + + LL+ + V Y +++ + K A+D LN+M +
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM-TRKG 286
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
LTP T++S++DG R + + I+G M K P Y + D G A
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV------YTYNTILD-GYCRA 339
Query: 204 AEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
++ R K L++ C M++ L K R EA+++ R
Sbjct: 340 NQLEEAR----KFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKG 304
Y ++ LC+E + +E C + R ++E G +P ++ S V C G
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG 444
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 13/232 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++ M G P V +L+D L R+N + A + G M R SP +T++ +
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
CR+ + E +L +D + V +N++I K A + L E R
Sbjct: 334 DGYCRANQLEEARKFMLEEMDCPP-NVVSFNIMIRGLCKVNRSSEAME-LVEEARRRRCN 391
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK-LLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y++++DG R +K + + R+ M+E+ LP ++ L + G A
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST--LVTGLCNAGMLDRA 449
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
++ C I T ++ A K R ++A ++ + +RG V S
Sbjct: 450 RGYIEKGCVPNI----GTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQS 497
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 190/417 (45%), Gaps = 15/417 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +V R+ G + +L AL + + LA L+ MV+ +++ ++
Sbjct: 143 DAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGI 202
Query: 90 QILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ C + GLL G+ S+V YN+++ + A + N M R +
Sbjct: 203 RAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVE-RGI 261
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TY +++ G R E+ E++ + M+ +P ++ +++ L G A
Sbjct: 262 VADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPS--VASCSFMVDGLRKRGHIDKA 319
Query: 205 EMIFKRACD-EKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
F+ AC ++ + + C ++ L K+ R +EA +++ ++ RG+ + Y
Sbjct: 320 ---FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LCK ++ + + E+G + + C + + LL+ +++KGL
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGL 436
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ S L+ C + A+ LH ++ + S +V T+ L+ G KDG M+EA R
Sbjct: 437 APSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAAR 496
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+FD M + VV + +F +++ C + +RKA + +D+M+ G PD TY+ +IS
Sbjct: 497 LFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 190/443 (42%), Gaps = 53/443 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP + ACNAL+D L + R A L+ M G+ PN+ T++++ LC+ G +
Sbjct: 330 GMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDA 389
Query: 102 LGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L + D GI +V YN +I+ Y + +F A LNEM + L P ++YS ++
Sbjct: 390 LCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE-KGLAPSAASYSPLIA 448
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQKLSDMGKTYAAEMIFKRAC 212
G R + M + + ++ +SGN Y +I G A +F +
Sbjct: 449 GLCR------KGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI 502
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + + T M++ + G V++A Q+Y + +RG+T + Y + ++VLC
Sbjct: 503 DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAM 562
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGK-------WKE----------------- 308
+ + D+ + + L+ + C +G+ W E
Sbjct: 563 KAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622
Query: 309 -----------VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ L + +KG+ D+ + +++ + I +A+ K+ S
Sbjct: 623 YAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
+V TY VL++ L K G + A + + M + + +S ++ + L + EL KA
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
H +L+ G + T+ +I GF
Sbjct: 743 HATILE-GCLANTVTFNTLIKGF 764
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 179/437 (40%), Gaps = 82/437 (18%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P+ ++ + L+ L R+ ++ A L+ M R+GVS N +T++ + C+ G +
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494
Query: 102 LGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L D I SSV+ +N++I+ Y + G+ AF ++M + R LTP TY S++
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD-RGLTPDNYTYRSLI- 552
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
V +G M K+ + L N V+ S
Sbjct: 553 --------SVLCLTLGAMKAKEFVDD--LENNCVVLNSFS-------------------- 582
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
++ KEGR+ E I+ + RG+ + + V K H E++
Sbjct: 583 ------LTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636
Query: 277 LLRDVVERGYIP------CAMEL-----------------------------SRFVASQC 301
L R++ E+G P C +++ + + C
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLC 696
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DV 360
G + L +L L +SF + +++ + +++KA LH I L+G L +
Sbjct: 697 KSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATI--LEGCLANT 754
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T++ L+ G K G+++ A+ + E S+ +++ LC + ++ KA + +E
Sbjct: 755 VTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNE 814
Query: 420 MLKMGHKPDEATYKQVI 436
ML G KPD Y +I
Sbjct: 815 MLYKGLKPDIVAYNILI 831
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 36/250 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L + RV EA+++ + + ERGI + Y V C+ + E + D++
Sbjct: 236 LMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLH 295
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
++P S V +G + L + + G++ + F C++L++ C +R+ +A
Sbjct: 296 FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAE 355
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE--LKVV----------- 392
L + + TY +L+ L K G M++A+ +FD M+E ++V
Sbjct: 356 RLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGY 415
Query: 393 -----------------------SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
S++S+ +++ LC +L AM+ H EM + G +
Sbjct: 416 CQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNV 475
Query: 430 ATYKQVISGF 439
T+ +ISGF
Sbjct: 476 YTFTTLISGF 485
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 140/361 (38%), Gaps = 50/361 (13%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC------RSGK 97
VP N +++ R +R A LY MV G++P+ +T+ + +LC ++ +
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKE 566
Query: 98 F----EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
F E +L+S +++MY + K+G + +EM R + +++
Sbjct: 567 FVDDLENNCVVLNSFSLTTLMYG-----FCKEGRLTETYHIWDEM-RARGVKLDLISFTV 620
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL--------SGNDYVIQKLSDMGKTYA-- 203
I+ A + E + M EK + P + S + ++Q L+ K A
Sbjct: 621 IVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADG 680
Query: 204 -----------------------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
A+++ + + T C L L+ EG +++A
Sbjct: 681 CSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA- 739
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ H G + + CK Q + L+++ E G+ P + S +
Sbjct: 740 KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINEL 799
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + +L + +L KGL D + L+ + + + DK + ++ + LK + D
Sbjct: 800 CKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDT 859
Query: 361 A 361
Sbjct: 860 P 860
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 195/470 (41%), Gaps = 44/470 (9%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S S ++ + GL + E + MR + +P +CN LL L + +L
Sbjct: 217 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 276
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSK 124
+ M+ G++P+ FT++++ LC+ G E + + + + G+ V+ YN +ID Y K
Sbjct: 277 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 336
Query: 125 KG-------------DFGA----------------------AFDRLNEMCNGRNLTPGFS 149
G D G AF+ +EM N L P
Sbjct: 337 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN-GLKPNVV 395
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TYS+++D + + + ++ M LLP F + +I G A +
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS--LIDANCKAGNLTEAWKLLN 453
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++L T +L L K GR+ EA +++ + + GI+ Y A V+ K
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E+ +L+ + E P + + C + K +E + +L + +G+ + +
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++++ Y + A+ +++ + + TY VL+DGL K G +E AV F M L
Sbjct: 574 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSL 633
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + + + ++ LC + A K DEM G PD + +I G
Sbjct: 634 GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 172/419 (41%), Gaps = 44/419 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++CY E + M+ G P V + L+DA ++ ++ A L+ M R G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
+ PN+FT++ + C++G LL+ + + V N+V +D K G A
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ M ++P Y++++ G + E+ E + +I+ M E + P L G+ +I
Sbjct: 485 EVFRSMLKD-GISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS--II 541
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
K ++I + I ++ A K G+ +A+ + + + G+
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ LCK G++ V+ Y C M
Sbjct: 602 ATIVTYCVLIDGLCK-------AGIVELAVD--YF-CRM--------------------- 630
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L GL + +SL++ C N I+ A L +++ + D+ + L+DG K
Sbjct: 631 ----LSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLK 686
Query: 373 DGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
G ++EA+ + M EL + + +VS EL +A K +EM++ G P+E
Sbjct: 687 HGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEV 745
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++++ +LS G F I T M+ L KEG ++ + +++ + E
Sbjct: 258 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 317
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G++ Y + ++ K EEV L ++ + G +P + + + C K
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E S + + GL + S+L++ +C + AI L + + + + TY L+D
Sbjct: 378 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K G + EA ++ + M + V ++ ++ ++ LC + +A + MLK G P
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497
Query: 428 DEATYKQVISGFM 440
++ Y ++ G++
Sbjct: 498 NQQVYTALVHGYI 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P +S ++DA ++ + A + M GV T+ ++ LC++G E+ +
Sbjct: 569 PVIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDY 626
Query: 104 ---LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+L G+ +V +Y +ID K +A +EM R +TP + +++++DG
Sbjct: 627 FCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM-QCRGMTPDITAFTALIDGNL 685
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + + ++ M E L + L ++ S G+ + A F ++ I +
Sbjct: 686 KHGNLQEALVLISRMTE--LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 743
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ C C+L+ K G++ EAI++ + + G+ +
Sbjct: 744 EVLCICLLREYYKRGQLDEAIELKNEMERMGLITESA 780
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 179/404 (44%), Gaps = 46/404 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P V A++ AL +N + A M ++PN T++++ LC+ G+ +
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 102 LGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ LL + ++V YN +I K A+D L EM P TY++++ G
Sbjct: 101 VALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLITG 159
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ +K++ + R+ +V + P D V TY+
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRP-------DVV---------TYS-------------- 189
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCG 276
C++ L KEGR+KEAI ++ + + G + ++ Y + ++ C+ + +E
Sbjct: 190 -------CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL + E G P + + + C + + +LL+ + KGL D +SLM+ C
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
++ A+ + ++ + S V TY+ +LDG + ++EEA + ++E+ +
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVV 360
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
SF I++ LC + +AM+ +E + PD Y VI G
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 65/371 (17%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKFTWSLV 88
D L V+ + GF P V + L+D L ++ ++ A L+G M++ G PN T++ +
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 89 AQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
CR GK + + LL+ + V Y +++ + K A+D LN+M +
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR-KG 286
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
LTP T++S++DG R + + I+G M K P Y + D G A
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV------YTYNTILD-GYCRA 339
Query: 204 AEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
++ R K L++ C M++ L K R EA+++ R
Sbjct: 340 NQLEEAR----KFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ LC+E + +E C + R ++E
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLE--------------------------------- 422
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGR 375
+ G L +S S+L+ C+ +D+A IE KG + ++ TY++L+D K R
Sbjct: 423 -EPGCLPNSITYSTLITGLCNAGMLDRARGY---IE--KGCVPNIGTYNLLIDAFRKANR 476
Query: 376 MEEAVRIFDYM 386
E+A + D M
Sbjct: 477 DEDARELLDDM 487
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 13/226 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++ M G P V +L+D L R+N + A + G M R SP +T++ +
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
CR+ + E +L +D + V +N++I K A + L E R
Sbjct: 334 DGYCRANQLEEARKFMLEEMDCPP-NVVSFNIMIRGLCKVNRSSEAME-LVEEARRRRCN 391
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK-LLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y++++DG R +K + + R+ M+E+ LP +I L + G A
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST--LITGLCNAGMLDRA 449
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ C I T ++ A K R ++A ++ + +RG
Sbjct: 450 RGYIEKGCVPNI----GTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 199/449 (44%), Gaps = 16/449 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + +++ G + L + R M V +A++D L +
Sbjct: 39 EGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIK 98
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVID 120
A ++ M G+ PN T++ + C GK+ LL I + V ++ +I+
Sbjct: 99 AQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALIN 158
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K+G A + EM RN+ P TYSS++DG ++ + E + + LMV K
Sbjct: 159 AFVKEGKVSGAEELYREMLR-RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCS 217
Query: 181 P-----KHFLSG----NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
P + G ++I +G A+ +F+ + TC +L L
Sbjct: 218 PDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC 277
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G++++A++++ + + + + + +N +CK ++ +E L + G +
Sbjct: 278 ENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVV 337
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + +G + E++ +L KG++ + +S+++ +C ++++A + +
Sbjct: 338 TYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSM 397
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
S DV T+ L+ G K GR+++ + +F M + +V+ + ++ ++ C + +L
Sbjct: 398 VSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDL 457
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A +EM+ G PD T++ +++G
Sbjct: 458 NGAQDIFEEMVSSGVCPDTITFRSMLAGL 486
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 178/413 (43%), Gaps = 21/413 (5%)
Query: 45 PA-VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
PA V L++ L R+ + A L MV +G P+ T+ + +C+ G L
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 104 LL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
+L +S I ++ V+Y+ ++D K G+ A + EM + + + P TY+ ++DG
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEM-HEKGIFPNVLTYNCMIDGY 125
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
Y K +++++ M+E+ + P + +I GK AE +++ I
Sbjct: 126 CSYGKWSDAEQLLRDMIERNIDPD--VVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC--KEHQPEEVC- 275
T M+ K R+++A ++ L+ +G + ++ C K H C
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQ 243
Query: 276 --------GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
L ++++ G P + + +A C GK ++ E+ + LD+
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
C+ ++ C ++D+A L + DV TY++L+ K+G A I+ M
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ S+ ++ +V C L +A + D M+ G PD T+ +I G+
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGY 416
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 167/387 (43%), Gaps = 26/387 (6%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGD 127
MV G N T++ + LCR G+ L L+D + +V Y +++ K GD
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+A + L +M + + YS+I+D + + I M EK + P + L+
Sbjct: 61 TVSALNMLRKM-DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFP-NVLTY 118
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
N +I GK AE + + + I+ T ++ A KEG+V A ++Y +
Sbjct: 119 N-CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-----------CAMELSRF 296
R I Y + ++ CK + E+ + +V +G P C
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C G ++L ++ G+ D C++L+ C N +++KA+ + +K K
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRK 412
LD AT +++++G+ K +++EA +F+ + E VV ++ I++ +
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVV---TYNILIGVFVKEGNFLR 354
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A + EML G P TY ++ GF
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGF 381
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S ++ Y G DGLE++ M G V NAL+ + ++
Sbjct: 400 EGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNG 459
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
A ++ MV GV P+ T+ + LC + + L +L+
Sbjct: 460 AQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 209/480 (43%), Gaps = 44/480 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYR 59
+I+S E + + ALS V+ Y + L+V++ MR ++G P + + N LL+A
Sbjct: 68 LIRSQECKCDEDVALS-VIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVE 126
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM- 114
+ L+ GV+PN T++++ ++ C+ +FE G L+ G V
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFS 186
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y+ VI+ +K G A + +EM R + P + Y+ ++DG + + +++ ++ +
Sbjct: 187 YSTVINDLAKTGKLDDALELFDEMSE-RRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKL 245
Query: 175 VEKKLLPKHFLSGN----------------------------------DYVIQKLSDMGK 200
+E + + + N +I L D G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGN 305
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
AE +F + K + T ML + G++KE+++++ ++ +R +V Y
Sbjct: 306 VDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNI 364
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ L + + +E + R + +GY F+ C G + ++ V KG
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG 424
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
LD + +S+++ C R++++A L ++ K L+ + L+ GL +D R+ +A
Sbjct: 425 GHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDAS 484
Query: 381 RIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M K + + S+ I++ LC + +A EML+ G KPD TY ++ G
Sbjct: 485 LLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGL 544
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 206/481 (42%), Gaps = 56/481 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S V++ + G D LE++ M P V+ N L+D ++ + ++
Sbjct: 178 EGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKM 237
Query: 66 ASCLYGAMVRDG-VSPNKFTWSLVAQILCRSGKFEVVLGLLDSG----------IYSSVM 114
A L+ ++ D V PN T +++ L + G+ + L + D YSS++
Sbjct: 238 AMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLI 297
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
+ L +G+ A NE+ R TY+++L G R K + S + +M
Sbjct: 298 HGLC-----DEGNVDKAESVFNELVE-RKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
++ + + +S N +I+ L + GK A MI++ + + T G + L G
Sbjct: 352 EQRNSV--NIVSYN-ILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNG 408
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE------------------VC- 275
V +A+ + + +G + Y + ++ LCK+ + EE VC
Sbjct: 409 YVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 276 ----GLLRD------------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
GL+RD + + G +P + + + C GK+ E + +L+
Sbjct: 469 ALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLEN 528
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL D S L+ C +R+I+ A+ L + + DV +++L+ GL G++++A
Sbjct: 529 GLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588
Query: 380 VRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + M+ ++ ++ ++ +++ +A M KMG +PD +Y ++ G
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKG 648
Query: 439 F 439
Sbjct: 649 L 649
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 186/422 (44%), Gaps = 15/422 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+G D V R G V A N L+ R + A L +M V P+ +
Sbjct: 86 RRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAY 142
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + + LC G+ L LLD + S V Y ++++ K FG A + L+EM
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ TP TY+ I++G R + + + I+ + P + V++ L
Sbjct: 203 -RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD--IVSYTTVLKGLCAA 259
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ +++F D+K + T +++ + G V+ AIQ+ +S+ G T +
Sbjct: 260 RRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLC 319
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N +CK+ + ++ L ++ G P + + + C G+W+ +ELL ++
Sbjct: 320 NIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR 379
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
K + ++ + C I++AI L + + S+ + TY+ L+ G GR++
Sbjct: 380 KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDS 439
Query: 379 AVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ +F+ + E + ++ +++ LCH + L A + M++ + T+ ++S
Sbjct: 440 ALELFNNLPCEPNTI---TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVS 496
Query: 438 GF 439
F
Sbjct: 497 FF 498
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 193/437 (44%), Gaps = 26/437 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D E+ + YGF P + + +L L L+ MV
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L ++ + N+VI+ K+G
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334
Query: 131 AFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A+D LN M CN P +Y+++L G R + E + ++ MV K P + ++
Sbjct: 335 AYDFLNNMGMYGCN-----PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC-PPNEVT 388
Query: 187 GNDYVI---QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
N ++ QK E++ + C I T ++ +GRV A++++
Sbjct: 389 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV----TYNALVHGFCVQGRVDSALELF 444
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + T+ Y + LC + + LL ++++ A+ + V+ C K
Sbjct: 445 NNLPCEPNTI---TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQK 501
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G +E EL++ +++ G + ++L++ + ++A+ L + SLD TY
Sbjct: 502 GFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITY 561
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLK 422
++D L ++ R EEA+++ ++++ + + ++ LC E +A+ M+
Sbjct: 562 SSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 621
Query: 423 MGHKPDEATYKQVISGF 439
G P+E+TY +I G
Sbjct: 622 NGCMPNESTYIILIEGL 638
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 161/400 (40%), Gaps = 52/400 (13%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + ++V++ +G D + M +YG P + +L L R
Sbjct: 308 SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRW 367
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMY 115
A L MVR PN+ T++ ILC+ G E + L++ GI V Y
Sbjct: 368 EHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGI---VTY 424
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N ++ + +G +A + N + P TY+++L G E+ + + ++ M+
Sbjct: 425 NALVHGFCVQGRVDSALELFNNL----PCEPNTITYTTLLTGLCHAERLDAAAELLAGMI 480
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+K P + ++ N ++ G A + + + T +L ++K+
Sbjct: 481 QKDC-PLNAVTFN-VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCN 538
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+EA+++ H + +G+++ Y + V+VL +E + EE +L V + G P ++
Sbjct: 539 SEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNK 598
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C + + + + + ++ G + +
Sbjct: 599 ILFALCKRCETDQAIDFFAYMVSNGCMPNE------------------------------ 628
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+TY +L++GL +G ++EA + + V+S S
Sbjct: 629 -----STYIILIEGLAHEGLLKEARYVLSELYAKGVLSKS 663
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
L R +A + E L+ +G D + C+ L+ C + A + E
Sbjct: 46 LRRLIA----RDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAE 101
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK 412
+DV Y+ L+ G + GR++ A R+ M + ++ ++ LC +
Sbjct: 102 ASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPP--DAYTYTPIIRGLCDRGRVGD 159
Query: 413 AMKNHDEMLKMGHKPDEATYKQVI------SGF 439
A+ D+ML+ G +P TY ++ SGF
Sbjct: 160 ALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGF 192
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 189/436 (43%), Gaps = 45/436 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N +++ +R + + A L M G+SPN +T+S++ LC+SG+ E L
Sbjct: 395 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 454
Query: 105 LDSGIY-----SSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILD 156
L+ ++ +Y +I Y ++G+ A FD++ ++ N+ P Y+S++
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV----NVLPDLYCYNSLIF 510
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHF--------------LSGNDYVIQKLSDMG--- 199
G + + E S + M E+ LLP F L + ++Q++ D G
Sbjct: 511 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 570
Query: 200 ---------KTY-------AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++Y FK D+ + L + G ++ LS G ++ A ++
Sbjct: 571 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 630
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
I + G Y + ++ LCK E+ G+L ++ ++G P + + + C
Sbjct: 631 SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 690
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G + +++L KGL+ + +SL++ C I A L+ ++ + D Y
Sbjct: 691 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
VL G G +E+A+ + + M S SSF +V C ++++ +K ++
Sbjct: 751 SVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 810
Query: 424 GHKPDEATYKQVISGF 439
G P+ T + +ISG
Sbjct: 811 GLVPNALTIENIISGL 826
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 175/401 (43%), Gaps = 11/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L+D R+ A + MV GV PNK T+ + + LC+ G+ + L
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 384
Query: 105 L-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L DS ++ YNL+I+ + + AF L+EM N ++P TYS ++ G
Sbjct: 385 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA-GISPNVYTYSIMIHGLC 443
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + E + ++ M K L P F+ +I G A IF + + L
Sbjct: 444 QSGEPEKASDLLEEMTTKGLKPNAFVYAP--LISGYCREGNVSLACEIFDKMTKVNV-LP 500
Query: 220 DDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
D C ++ LSK GRV+E+ + + + ERG+ + Y ++ K E L+
Sbjct: 501 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 560
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ +++ G P + + S ++V ++LD+G++LD+ L+ S+
Sbjct: 561 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSF 397
++ A + IEK DV Y L+ GL K E+A I D M + V + +
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 680
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ LC ++ A + +L G P+ TY +I G
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 721
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 180/485 (37%), Gaps = 53/485 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAV------SAC-------NAL 53
G SQ L ++ + +G LE Y +R + V C N L
Sbjct: 204 GHGSQHSVLQRAVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL 263
Query: 54 LDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV 113
+ L R + A M G+ P+ FT+ + LC+S + LLD + +
Sbjct: 264 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 323
Query: 114 MYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
N+V ID + ++G+ AF + EM + P TY +++ G + + + +
Sbjct: 324 KPNVVVYANLIDGFMREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRAS 382
Query: 169 RIVGLMVEKKLLPK----------HF-------------------LSGNDY----VIQKL 195
++ MV P HF +S N Y +I L
Sbjct: 383 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 442
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+ A + + + ++ ++ +EG V A +I+ +++ +
Sbjct: 443 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 502
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + + L K + EE + ERG +P S + G + E+L+
Sbjct: 503 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 562
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+LD GL + L+E Y + I+K + + LD Y +L+ L G
Sbjct: 563 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622
Query: 376 MEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
ME A R+ + K V + ++S LC + KA DEM K G P+ Y
Sbjct: 623 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 682
Query: 435 VISGF 439
+I G
Sbjct: 683 LIDGL 687
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 178/414 (42%), Gaps = 48/414 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++ M +P + N+L+ L + + ++ + M G+ PN+FT+S +
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547
Query: 93 CRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
++G E +V +LD+G+ + V+Y +++ Y K D ++++
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD----IEKVS----------- 592
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
ST+ S+LD + + +RI G++ I LS G AA +
Sbjct: 593 -STFKSMLD-----QGVMLDNRIYGIL-----------------IHNLSSSGNMEAAFRV 629
Query: 208 FKRACDEKIELQD-DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
++ + D ++ L K ++A I +S++G+ Y A ++ LC
Sbjct: 630 LS-GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + ++ +G +P + + + C G L + +L G+ D+F
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S L S +++A+ L I+ L+G +++++ L+DG K G+M+E +++ +
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFL-IEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVI 807
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+V ++ + + + + L E K + H +++ K E+ + S FM
Sbjct: 808 MGRGLVPNA--LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 859
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 149/364 (40%), Gaps = 41/364 (11%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG 108
LL++ ++ ++I S + +M+ GV + + ++ L SG F V+ G+ +G
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637
Query: 109 IYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
V +Y+ +I K D AF L+EM + + P Y++++DG + +
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSK-KGVDPNIVCYNALIDGLCKSGDISYA 696
Query: 168 DRIVGLMVEKKLLPK-----HFLSGNDYVIQKLSDMGKTYA--AEMIFKRACDEKIELQD 220
+ ++ K L+P + G+ K+ D+ + EM+ +
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGS----CKVGDISNAFYLYNEMLATGITPDAFVYSV 752
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T GC S G +++A+ + + RG S + V+ CK + +E LL
Sbjct: 753 LTTGC-----SSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV 806
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK----------GLLLDSF---- 326
++ RG +P A+ + ++ GK EV + + K L +D
Sbjct: 807 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 866
Query: 327 ----CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
++ +C +DKA+ L I + ++Y ++D L + G++ EA+ +
Sbjct: 867 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 926
Query: 383 FDYM 386
M
Sbjct: 927 LKEM 930
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 26/258 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ + G VP +L+D + +I A LY M+ G++P+ F +S++
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757
Query: 93 CRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+G E + L++ G S +N ++D + K+G +L + GR L P
Sbjct: 758 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETL-KLLHVIMGRGLVPNA 816
Query: 149 STYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
T +I+ G K +EV V L QK S+ + + +
Sbjct: 817 LTIENIISGLSEAGKLSEVHTIFVELQ------------------QKTSESAARHFSSLF 858
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
KI L D M++ KEG + +A+ + +I + + S Y A V+ LC+
Sbjct: 859 MDMINQGKIPL--DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 916
Query: 268 EHQPEEVCGLLRDVVERG 285
+ + E LL+++ +RG
Sbjct: 917 KGKLSEALNLLKEMDKRG 934
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
S +E YC R+ D A + +++ + L+ TY+VL+ GL + G +EEA M++
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 286
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+V ++ +++ LC + +A DEM KP+ Y +I GFM
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 338
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 176/406 (43%), Gaps = 16/406 (3%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
F V+ CN LL++L E R A + M +S N T++ + + G+F+ L
Sbjct: 222 FPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAAL 280
Query: 103 GLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+L+ SV YN++ID + AF L M +LTP TY+++++G
Sbjct: 281 CVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRM-RKDDLTPDECTYNTLING 339
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
R K + + M+ + L+P + + Y + D + +EM
Sbjct: 340 FFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPS 399
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
++ T +L K + AI + + RGIT+ + ++ C+ + +
Sbjct: 400 EL-----TYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKA 454
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+L+ + E G P + S + C K E +E+LS + G+L + ++L+ Y
Sbjct: 455 KQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICY 514
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VS 393
YC + +A+ + I + + ++ LL +++G + EA YM + +
Sbjct: 515 YCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFD 574
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S SF ++ CH + A +D+M++ G+ P+ TY+ ++ G
Sbjct: 575 SVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGL 620
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 172/379 (45%), Gaps = 11/379 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV- 74
+++L + KG + L + +MM G VP A LL+ L + +++ AS ++ ++
Sbjct: 684 TILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIIC 743
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
++G+ + ++ + +S + ++ S +Y +S YN+++ Y K+G F
Sbjct: 744 KEGLYADCIAYNSLMNGYLKSRNVNTIKRMM-SDMYQNEVYPNSASYNILMHGYVKRGQF 802
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+ M + + P TY ++ G +++ + + MV + + P +
Sbjct: 803 SKSLYLYKYMVR-KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVF-- 859
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I S+ K + A +F + T M+ L ++G + + ++ H + +
Sbjct: 860 DILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQ 919
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ + Y A VN C+ + + L ++ G +P + S + C GK +E
Sbjct: 920 VGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEE 979
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ S+++ G++ ++LM C +I A+ L +E + +DV +Y+VL+
Sbjct: 980 AVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLIT 1039
Query: 369 GLFKDGRMEEAVRIFDYMK 387
GL KD + +A+ ++ MK
Sbjct: 1040 GLCKDKHISDALDLYGEMK 1058
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 168/422 (39%), Gaps = 26/422 (6%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ M VP+V+ ++D R I A + M GV P++ T+S + C
Sbjct: 352 VFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYC 411
Query: 94 RSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ + L++ GI + M ++ID + + G+ A L M + P
Sbjct: 412 KVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFED-GIDPDV 470
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--------DYVIQKLSDMGK 200
TYS++++G R K + I+ M + +LP L YV + L
Sbjct: 471 ITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVD 530
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
Y ++ +L A +EG + EA +S I+ +
Sbjct: 531 IYRRGLVANPVIH----------NALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNR 580
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ C + D+V GY P + C G + + +S +LD
Sbjct: 581 IIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIP 640
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+D ++L+ C +D+A+ L K+ K D+ TY +LL G + G++ A+
Sbjct: 641 FAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPAL 700
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKA-MKNHDEMLKMGHKPDEATYKQVISG 438
I M E VV + ++ +++ L + +++ A H+ + K G D Y +++G
Sbjct: 701 VILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNG 760
Query: 439 FM 440
++
Sbjct: 761 YL 762
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 93/495 (18%), Positives = 195/495 (39%), Gaps = 74/495 (14%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDAL--------YRQ--- 60
S + + ++D Y H+G + VY M YG+ P V LL L RQ
Sbjct: 575 SVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMS 634
Query: 61 --------------NEIRLASCLYGA----------MVRDGVSPNKFTWSLVAQILCRSG 96
N + L C YG M+++ P+ T++++ CR G
Sbjct: 635 CLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKG 694
Query: 97 KFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K L +L+ G+ +V Y +++ +G AA +E+ L Y
Sbjct: 695 KILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAY 754
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSG-------------NDYVIQ 193
+S+++G + R++ M + ++ P + G Y+++
Sbjct: 755 NSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 814
Query: 194 K---------------LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
K LS+ G A ++ E I ++ A S++ ++
Sbjct: 815 KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHN 874
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+Q+++ + ++ + A +N L ++ + +L ++++ G P V
Sbjct: 875 ALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVN 934
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
++C G+ L + G++ SS++ C ++++A+ + + +
Sbjct: 935 AKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVP 994
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
VAT+ L+ L K+ ++ +A+ + M+ ++ V S+ ++++ LC K + A+ +
Sbjct: 995 TVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLY 1054
Query: 418 DEMLKMGHKPDEATY 432
EM G P+ TY
Sbjct: 1055 GEMKSKGLWPNITTY 1069
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/502 (18%), Positives = 196/502 (39%), Gaps = 84/502 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G ++ + M G P V +AL++ + R ++ + M +
Sbjct: 439 TILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQK 498
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL---------GLLDSGI----------------- 109
G+ PN ++ + C++G + L GL+ + +
Sbjct: 499 SGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITE 558
Query: 110 --------------YSSVMYNLVIDFYSKKGDFGAAFDRLNEM---------CNGRNLTP 146
+ SV +N +ID Y +G+ AF ++M C +NL
Sbjct: 559 AEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLR 618
Query: 147 GF-------------------------STYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G T++++L G RY + + + M++ LP
Sbjct: 619 GLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLP 678
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ ++ GK A +I + ++ + C+L L EG+VK A
Sbjct: 679 D--IHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASY 736
Query: 242 IYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++H +I + G+ Y + +N K + ++ D+ + P + + +
Sbjct: 737 VFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGY 796
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK--LKGSL 358
+G++ + L ++ KG+ D+ L+ ID A+ +EK L+G
Sbjct: 797 VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF---LEKMVLEGIF 853
Query: 359 -DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D +D+L+ + +M A+++F+ MK L + SS +F +++ L L + K
Sbjct: 854 PDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKV 913
Query: 417 HDEMLKMGHKPDEATYKQVISG 438
EML++G +P+ Y +++
Sbjct: 914 LHEMLQVGLQPNHTHYIALVNA 935
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 129/316 (40%), Gaps = 39/316 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P ++ N L+ ++ + + LY MVR G+ P+ T+ L+ L G ++ +
Sbjct: 784 PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 843
Query: 105 LDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ GI+ ++++++I +S+K A N M +++P T+S++++G
Sbjct: 844 LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCM-KWLHMSPSSKTFSAMINGLI 902
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKH--FLS------------------------------- 186
R + S +++ M++ L P H +++
Sbjct: 903 RKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEV 962
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I+ L GK A ++F + T ++ +L KE ++ +A+ + L+
Sbjct: 963 AESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLM 1022
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ V Y + LCK+ + L ++ +G P + G+
Sbjct: 1023 ELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRV 1082
Query: 307 KEVEELLSAVLDKGLL 322
+ EELL + ++GL+
Sbjct: 1083 QNGEELLEDIEERGLI 1098
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 35/249 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++KA KE +V +A + + G +N L +E + + V LR+ + R
Sbjct: 162 LVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARK 221
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAV------------------LDKGLLLDSFC 327
+ + + S C G++++ E++L + + KG + C
Sbjct: 222 FPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALC 281
Query: 328 CSSLME-------YYCSNRQIDK---------AIALHIKIEKLKGSLDVATYDVLLDGLF 371
ME Y N IDK A L ++ K + D TY+ L++G F
Sbjct: 282 VLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFF 341
Query: 372 KDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
++G++ A +F++M +V S +++ ++ C + + KA+ EM G P E
Sbjct: 342 REGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSEL 401
Query: 431 TYKQVISGF 439
TY +++G+
Sbjct: 402 TYSALLNGY 410
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 190/413 (46%), Gaps = 10/413 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L++ M + G VP N ++ L + + I A+ + M+ G +P+ T+ +
Sbjct: 264 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLM 323
Query: 90 QILCRSGKFEVVLGLL-DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
LC+ G+ + L +SV++N +I + G A L++M + P
Sbjct: 324 NGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 383
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ G + ++ ++ M K P + ++ +GK A +
Sbjct: 384 CTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVY--SYTILVDGFCKLGKIDEAYNLL 441
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ ++ C++ A KE R+ EA++I+ + +G + + ++ LC+
Sbjct: 442 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 501
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ + LLRD++ G + + + + + +G+ KE +L++ ++ +G LLD
Sbjct: 502 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITY 561
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+SL++ C ++DKA +L K+ + + ++L++GL + G +EEAV ++ KE
Sbjct: 562 NSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV---EFQKE 618
Query: 389 LKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ + S+ +F +++ LC + + ++ G PD TY ++S
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 181/410 (44%), Gaps = 14/410 (3%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY P + N +L+ L N ++A+ ++ M+ + P FT+ +V + LC
Sbjct: 166 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVN 225
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + L +L + +SV+Y +I SK A L EM P T+
Sbjct: 226 EVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF-LMGCVPDAETF 284
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+ ++ G ++++ + ++V M+ + P G Y++ L +G+ AA+ +F R
Sbjct: 285 NDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYG--YLMNGLCKIGRVDAAKDLFYRI 342
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQ 270
+ + ++ GR+ +A + +++ GI Y + + K+
Sbjct: 343 PKPTSVIFN----TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+LRD+ +G P + V C GK E LL+ + GL ++ +
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
L+ +C +I +A+ + ++ + DV T++ L+ GL + ++ A+ + D + E
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++ ++ +++ E+++A K +EM+ G DE TY +I G
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGL 568
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 142/353 (40%), Gaps = 43/353 (12%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M+ YG VP V N+L+ +++ + LA + M G PN ++++++ C+ G
Sbjct: 373 MVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLG 432
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K + LL D ++V +N +I + K+ A + EM + P T+
Sbjct: 433 KIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-KGCKPDVYTF 491
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+S++ G L ++ + A + +
Sbjct: 492 NSLISG-------------------------------------LCEVDEIKHALWLLRDM 514
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
E + T ++ A + G +KEA ++ + + +G + + Y + + LC+ +
Sbjct: 515 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEV 574
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ L ++ G +P ++ + + C G +E E ++ +G D +SL
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ C +I+ + + K++ D TY+ L+ L K G + +A + D
Sbjct: 635 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLD 687
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 153/355 (43%), Gaps = 13/355 (3%)
Query: 92 LCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
L +G+F+ + LL D GI + ++ ++ Y K G G + EM N + P
Sbjct: 115 LGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP 174
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
F +Y+ +L+ +V+ + M+ +K+ P F G V++ L + + +A
Sbjct: 175 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG--VVMKALCAVNEVDSALS 232
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + ++ +LSK RV EA+Q+ + G + + LC
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + E ++ ++ RG+ P + + C G+ ++L + S
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----TSV 348
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ + ++ ++D A A+ + G + DV TY+ L+ G +K G + A+ +
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ + S+ I+V C L ++ +A +EM G KP+ + +IS F
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 8/327 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KGL LEV R MR G P V + L+D + +I A L M DG+ PN
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPN 452
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
++ + C+ + E+ + G V +N +I + + A L
Sbjct: 453 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 512
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + + TY+++++ R + + + ++V MV + L + +I+ L
Sbjct: 513 DMIS-EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS--LIKGLC 569
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G+ A +F++ + + +C ++ L + G V+EA++ + RG T
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ + +N LC+ + E+ + R + G P + + ++ C G + LL
Sbjct: 630 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEG 689
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDK 343
++ G + + S L++ +D+
Sbjct: 690 IEDGFVPNDRTWSILLQSLVPQETLDR 716
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 118/290 (40%), Gaps = 43/290 (14%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + + ++ + + + +E++R M G P V N+L+ L +EI
Sbjct: 445 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 504
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
+ A L M+ +GV N +V YN +I+ +
Sbjct: 505 KHALWLLRDMISEGVVAN------------------------------TVTYNTLINAFL 534
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++G+ A +NEM +L TY+S++ G R + + + + M+ L+P
Sbjct: 535 RRGEIKEARKLVNEMVFQGSLLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS 593
Query: 184 FLSGNDYVIQKLSDMGKT-----YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ +I L G + EM+ + + + + T ++ L + GR+++
Sbjct: 594 I--SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV-----TFNSLINGLCRAGRIED 646
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ ++ + GI Y ++ LCK + C LL + +E G++P
Sbjct: 647 GLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 696
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 51/111 (45%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S + +++++ G+ + +E + M + G P + N+L++ L R I
Sbjct: 587 DGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 646
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN 116
++ + +G+ P+ T++ + LC+ G LLD GI + N
Sbjct: 647 GLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 697
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 191/438 (43%), Gaps = 15/438 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++L+C + +GL V + G++P + L+ L ++ I A+ L+ M
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYS------SVMYNLVIDFY 122
+ G +PN T+ + + LCR+G + L L DS +Y + Y+++ID
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K A D EM + +TP +Y+S++ G K E + R+ MV + + P
Sbjct: 253 CKDRREDEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I L GK A+ + + I T +++ G + A ++
Sbjct: 312 --VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + +G Y +N CK + EE L +++ G P +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
GK + ++L + G+ D + + C N + +A+ L K++ LD+
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
++ L+DGL K G++E A +F+ + + ++ ++ I++ C ++ KA +M
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 549
Query: 422 KMGHKPDEATYKQVISGF 439
K G PD+ TY +I GF
Sbjct: 550 KNGCTPDKITYATLIRGF 567
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 154/362 (42%), Gaps = 49/362 (13%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+++ M+V G P V + +L+ + A L+ MV GV PN T++++ +L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 322
Query: 93 CRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ GK +++ ++ GI +++ YN +I+ + GD +A + M + P
Sbjct: 323 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM-PSKGCEPD 381
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
Y+ +++G + K E + ++ M++ + K D+ KTY
Sbjct: 382 VICYTVLINGYCKTSKVEEAMKLYNGMLQ---------------VGKRPDV-KTY----- 420
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
G +L L + G+V +A +++ ++ GI Y F+N LCK
Sbjct: 421 ----------------GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 464
Query: 268 E---HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ E+ L+ + I C + + C GK + EL + + L D
Sbjct: 465 NGCLFEAMELFNKLKSYNIKLDIEC---FNCLIDGLCKAGKLETAWELFEKLPQEELQPD 521
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++ +C Q+ KA L K+EK + D TY L+ G F+ ++E+ V +
Sbjct: 522 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581
Query: 385 YM 386
M
Sbjct: 582 MM 583
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 11/218 (5%)
Query: 232 KEGRVK--EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K G + +A Q +HL+ T S + ++ L K +V L + G P
Sbjct: 71 KTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPD 130
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
L+ + C + E +++ +L +G + D ++L++ C +I KA L
Sbjct: 131 CCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFT 190
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD--------YMKELKVVSSSSFVIVV 401
+++KL + + TY L+ GL + G + A+++ Y K V S+ I++
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV-VISYSIII 249
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC + +A +EM G P +Y +I GF
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGF 287
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 183/410 (44%), Gaps = 11/410 (2%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA---QIL- 92
MM YG +P V + N LL L + A M GV P+ T++++A +IL
Sbjct: 295 MMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILG 354
Query: 93 CRSGKFEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
SG ++VV +L +G+ V Y ++I + + G+ +F +L E + L TY
Sbjct: 355 LISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF-KLKEKMLSQGLKLSIVTY 413
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+ +L + + D V L+ E +++ K L +I L G A +++
Sbjct: 414 TVLLSSLCKSGRI---DEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEE 470
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
C ++I C ++ L ++G + EA + +++ + Y ++ K
Sbjct: 471 MCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGN 530
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E + ++E+G P + + + C KGK E +LL + GL+ S ++
Sbjct: 531 IGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT 590
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
LM YC + + ++E TY V++ GL K+GR+ E+V++ YM
Sbjct: 591 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 650
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ V+ C +L+KA + H++ML+ +P TY +I+G
Sbjct: 651 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 185/453 (40%), Gaps = 44/453 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + LE M +G P + N L + I A + M+ +G++P+ T+
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378
Query: 86 SLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+++ C+ G E L L G+ S V Y +++ K G A L+EM
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM-E 437
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
L P TYS ++ G + E + + M K++ P F+ +I L + G
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSA--IISGLFEKGA 495
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A+M F + + M+ +K G + EA++ Y I E+GI+ + +
Sbjct: 496 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 555
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCA-------------------------MELSR 295
+ CK+ + E LL + G +P + ME
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615
Query: 296 FVASQ----------CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+Q C +G+ E +LL + +GL D +++++ +C + KA
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRL 404
LH ++ + TY+VL++GL G +++A R+ +++ + ++ ++ ++
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 735
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
C +++ A+ +M++ G + Y VI+
Sbjct: 736 CAKGDVQNALVFFHQMVERGFEVSIRDYSAVIN 768
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 147/351 (41%), Gaps = 8/351 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V G P + + L+ L ++ + A LY M + PN F S + L G
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 495
Query: 98 FEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
DS S V +YN++ID Y+K G+ G A ++ + ++P T++
Sbjct: 496 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE-KGISPTIVTFN 554
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++ G + K + +++ + L+P ++ + G ++ +
Sbjct: 555 SLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT--LMNGYCEEGDMHSMFDMLHEME 612
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ I+ T ++K L KEGR+ E++Q+ + RG+ Y + CK H +
Sbjct: 613 AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ L +++ P + + + C G K+ + LL + D+ + L ++++
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ +C+ + A+ ++ + + + Y +++ L K + +A F
Sbjct: 733 KAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 783
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 184/430 (42%), Gaps = 24/430 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS + D L V M+V +++ N+LL L R +I +Y + GV N
Sbjct: 178 YSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDIMWD--VYNEIKASGVPQN 234
Query: 82 KFTWSLVAQILCRSGKFE-VVLGLLDSG----IYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
++T ++ LCR + + V L ++G S V +N ++ + K G A
Sbjct: 235 EYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
M L P +Y+ +L G E E ++ + VE ++ + L+ ++
Sbjct: 295 MMIK-YGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCG-CMLKALSKEGRVKEAIQIYHLISERGI 251
+S K M+ + + CG C + G ++E+ ++ + +G+
Sbjct: 354 GLISGAWKV-VQRMLLNGLNPDLVTYTILICGHCQM------GNIEESFKLKEKMLSQGL 406
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y ++ LCK + +E LL ++ G P + S + C +G +E E
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIE 466
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + K + +SF CS+++ I +A + K + ++ Y++++DG
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G + EAVR + + E K +S + +F ++ C +L +A+K D + G P
Sbjct: 527 KLGNIGEAVRSYKQIIE-KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585
Query: 430 ATYKQVISGF 439
TY +++G+
Sbjct: 586 VTYTTLMNGY 595
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 182/411 (44%), Gaps = 50/411 (12%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
+M + G+ P V + + +++ R E+ L M R G+ PN + + + +LCR
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 97 KF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K E ++ GI +V+Y +ID + K+GD AA EM + R++TP TY
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTY 832
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++I+ G + +G MVE KL + F G
Sbjct: 833 TAIISGFCQ----------IGDMVEAGKLFHEMFCKG----------------------- 859
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+E T ++ K G +K+A ++++ + + G + Y ++ LCKE
Sbjct: 860 -----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LL ++ + G P + V C G +E +L+ GL D+ ++
Sbjct: 915 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLD--VATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
LM+ YC + ++DKA I E L L + T++VL++G G +E+ ++ ++M
Sbjct: 975 LMDAYCKSGEMDKA--QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1032
Query: 389 LKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++++F +V + C L+ A + +M G PD TY+ ++ G
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 178/422 (42%), Gaps = 12/422 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ-NEIRLASCLYGAMVRDGVSPNKFT 84
GL + V+ M YG V +V +CN L L + + A ++ GV N +
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 691
Query: 85 WSLVAQILCRSGKFEV---VLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++V +C+ G+ + +L L++ Y+ + Y+ V++ Y + G+ + +L E+
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW-KLIEVM 750
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ L P Y SI+ R K ++ M+ + +LP + +I G
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT--LIDGFCKRG 808
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA F I T ++ + G + EA +++H + +G+ +
Sbjct: 809 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N CK ++ + +++ G P + + + C +G ELL +
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 928
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL + F +S++ C + I++A+ L + E + D TY L+D K G M++A
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 380 VRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
I M K L+ + +F ++++ C L K + ML G P+ T+ ++
Sbjct: 989 QEILKEMLGKGLQ-PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 1047
Query: 438 GF 439
+
Sbjct: 1048 QY 1049
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 124/271 (45%), Gaps = 8/271 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + S + +++ Y G D V+ M G P V L+D L ++ ++
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVI 119
A+ L M + G+ PN FT++ + LC+SG E + L+ +G+ + +V Y ++
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D Y K G+ A + L EM G+ L P T++ +++G + E ++++ M+ K +
Sbjct: 977 DAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + ++++ AA I+K C + T ++K K +KEA
Sbjct: 1036 APN--ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++ + +G +V S Y + K +
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE--------------- 233
D Q L D G A +F++ + + L D+C L LSK+
Sbjct: 622 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 681
Query: 234 ---------------------GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
GR+KEA + L+ +G T Y VN C+ + +
Sbjct: 682 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 741
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+V L+ + +G P + + C K E EE S ++ +G+L D+ ++L+
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELK 390
+ +C I A ++ + DV TY ++ G + G M EA ++F M K L+
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S +F +++ C ++ A + H+ M++ G P+ TY +I G
Sbjct: 862 -PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 144/381 (37%), Gaps = 51/381 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D + +G + + M P V A++ + ++ A L+ M
Sbjct: 798 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ P+ T++ + C++G F V ++ +G +V+ Y +ID K+GD +
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L+EM L P TY+SI++G + E + ++VG L + +
Sbjct: 918 ANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL------NADTV 970
Query: 191 VIQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L D G+ A+ I K + ++ T ++ G +++ ++ + +
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+GI + + + V C + + + +D+ RG P V C
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
KE L + KG S+ V+TY VL
Sbjct: 1091 KEAWFLFQEMKGKGF-----------------------------------SVSVSTYSVL 1115
Query: 367 LDGLFKDGRMEEAVRIFDYMK 387
+ G K + EA +FD M+
Sbjct: 1116 IKGFLKRKKFLEAREVFDQMR 1136
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 192/429 (44%), Gaps = 54/429 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYR--MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
VL+ +GLF LE Y + P V + N ++ A+ + + A ++ M
Sbjct: 157 VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAI 216
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGA 130
P+ FT+ + LC+ + + + LLD G + SSV +N++I+ KKGD
Sbjct: 217 QKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVR 276
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
++ M + P TY++I++G K + + ++ MV K +P
Sbjct: 277 VTKLVDNMF-LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVP--------- 326
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
D T G ++ L K+GR + + + + ERG
Sbjct: 327 ----------------------------NDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ L KE + EE GL + +VE+G P + S + C +GK E +
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E+L +++KG ++F SSL++ + KAI + ++ K + Y VL+ GL
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478
Query: 371 FKDGRMEEAVRIFDYM--KELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEML--KMG 424
+DG++ EA+ ++ +M + L+ VV+ SS ++ LC+ + +K +EML +
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSS---MIHGLCNAGSVEVGLKLFNEMLCQESD 535
Query: 425 HKPDEATYK 433
+PD TY
Sbjct: 536 SQPDVVTYN 544
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 168/384 (43%), Gaps = 18/384 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +LV+ GL +EV+R M + P V L+D L +++ I A L M
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDF 128
+G P+ T++++ LC+ G V L+D+ + + V YN +I+ KG
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+ M + P TY ++++G + ++ ++ + E+ H N
Sbjct: 310 DKAVSLLDRMVASK-CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG---HH---AN 362
Query: 189 DY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+Y +I L K+ A ++K+ ++ + ++ L +EG++ EA +I
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +G T Y + + K ++ + +++ + +P + S + C G
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI--EKLKGSLDVAT 362
K +E + + +L +GL D SS++ C+ ++ + L ++ ++ DV T
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYM 386
Y++LL L K + A+ + + M
Sbjct: 543 YNILLRALCKQNSISHAIDLLNSM 566
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 154/337 (45%), Gaps = 18/337 (5%)
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
S Y+L I+ Y+ GDFG F + M R + F + IL R Y K + ++ +
Sbjct: 81 STFYSL-IENYANSGDFGTLFQVFDRMKRERRV---FIEKNFILV-FRAYGKAHLPEKAI 135
Query: 172 ---GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCM 226
G MV++ + S N V+ + G + A ++ K + + + +
Sbjct: 136 ELFGRMVDEFQCRRTVRSFNS-VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLV 194
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV---LCKEHQPEEVCGLLRDVVE 283
+KA+ K G V AI+++ E I + D + + + LCKE + +E LL ++
Sbjct: 195 IKAMCKLGLVDRAIEVFR---EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P ++ + + C KG V +L+ + KG + + ++++ C ++DK
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVS 402
A++L ++ K + TY L++GL K GR + V + ++E + ++ ++S
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L ++ +AM +M++ G +P+ Y +I G
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 10/252 (3%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
VP L++ L +Q L ++ G N++ +S + L + K E +G
Sbjct: 325 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 384
Query: 104 L----LDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L ++ G + V+Y+ +ID ++G A + L EM N + TP TYSS++ G
Sbjct: 385 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN-KGCTPNAFTYSSLIKGF 443
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ ++ + R+ M + +P +I L + GK A M++ +
Sbjct: 444 FKTGNSQKAIRVWKEMAKNNCVPNEICY--SVLIHGLCEDGKLREAMMMWTHMLGRGLRP 501
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYH--LISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
M+ L G V+ +++++ L E Y + LCK++
Sbjct: 502 DVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAID 561
Query: 277 LLRDVVERGYIP 288
LL +++RG P
Sbjct: 562 LLNSMLDRGCNP 573
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + + C G E+ + + D F +LM+ C +ID+A+ L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLC 405
+++ T++VL++GL K G M ++ D M LK V + ++ +++ LC
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF-LKGCVPNEVTYNTIINGLC 304
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+L KA+ D M+ P++ TY +I+G +
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 194/433 (44%), Gaps = 54/433 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYR--MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ + VL+ +GLF LE Y + P V + N ++ A+ + + A ++
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKG 126
M P+ FT+ + LC+ + + + LLD G + SSV +N++I+ KKG
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D ++ M + P TY++I++G K + + ++ MV K +P
Sbjct: 257 DMVRVTKLVDNMF-LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVP----- 310
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
D T G ++ L K+GR + + + +
Sbjct: 311 --------------------------------NDVTYGTLINGLVKQGRSVDGVHLLSSL 338
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
ERG + Y ++ L KE + EE GL + +VE+G P + S + C +GK
Sbjct: 339 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 398
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E +E+L +++KG ++F SSL++ + KAI + ++ K + Y VL
Sbjct: 399 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 458
Query: 367 LDGLFKDGRMEEAVRIFDYM--KELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEML- 421
+ GL +DG++ EA+ ++ +M + L+ VV+ SS ++ LC+ + +K +EML
Sbjct: 459 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS---MIHGLCNAGSVEVGLKLFNEMLC 515
Query: 422 -KMGHKPDEATYK 433
+ +PD TY
Sbjct: 516 QESDSQPDVVTYN 528
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 168/384 (43%), Gaps = 18/384 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +LV+ GL +EV+R M + P V L+D L +++ I A L M
Sbjct: 174 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDF 128
+G P+ T++++ LC+ G V L+D+ + + V YN +I+ KG
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+ M + P TY ++++G + ++ ++ + E+ H N
Sbjct: 294 DKAVSLLDRMVASK-CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG---HH---AN 346
Query: 189 DY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+Y +I L K+ A ++K+ ++ + ++ L +EG++ EA +I
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ +G T Y + + K ++ + +++ + +P + S + C G
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI--EKLKGSLDVAT 362
K +E + + +L +GL D SS++ C+ ++ + L ++ ++ DV T
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYM 386
Y++LL L K + A+ + + M
Sbjct: 527 YNILLRALCKQNSISHAIDLLNSM 550
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 154/340 (45%), Gaps = 17/340 (5%)
Query: 106 DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
DS YS +I+ Y+ GDFG F + M R + F + IL R Y K
Sbjct: 64 DSTFYS------LIENYANSGDFGTLFQVFDRMKRERRV---FIEKNFIL-VFRAYGKAH 113
Query: 166 VSDRIV---GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD- 221
+ ++ + G MV++ + S N V+ + G + A ++ K + +
Sbjct: 114 LPEKAIELFGRMVDEFQCRRTVRSFNS-VLNVIIQEGLFHRALEFYECGVGGKTNISPNV 172
Query: 222 -TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+ ++KA+ K G V AI+++ ++ + Y ++ LCKE + +E LL +
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ G P ++ + + C KG V +L+ + KG + + ++++ C +
Sbjct: 233 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 292
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVI 399
+DKA++L ++ K + TY L++GL K GR + V + ++E + ++
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++S L ++ +AM +M++ G +P+ Y +I G
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 392
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 10/252 (3%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
VP L++ L +Q L ++ G N++ +S + L + K E +G
Sbjct: 309 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 368
Query: 104 L----LDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L ++ G + V+Y+ +ID ++G A + L EM N + TP TYSS++ G
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN-KGCTPNAFTYSSLIKGF 427
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ ++ + R+ M + +P +I L + GK A M++ +
Sbjct: 428 FKTGNSQKAIRVWKEMAKNNCVPNEICYS--VLIHGLCEDGKLREAMMMWTHMLGRGLRP 485
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYH--LISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
M+ L G V+ +++++ L E Y + LCK++
Sbjct: 486 DVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAID 545
Query: 277 LLRDVVERGYIP 288
LL +++RG P
Sbjct: 546 LLNSMLDRGCNP 557
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + + C G E+ + + D F +LM+ C +ID+A+ L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLC 405
+++ T++VL++GL K G M ++ D M LK V + ++ +++ LC
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF-LKGCVPNEVTYNTIINGLC 288
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+L KA+ D M+ P++ TY +I+G +
Sbjct: 289 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 323
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 190/404 (47%), Gaps = 17/404 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A NAL++ + N I A+ + M SP+ T++++ LC GK ++ L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 105 L-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L D+ + + Y ++I+ +G A ++EM + R L P TY++I+ G
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIRGMC 274
Query: 160 RYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K + DR ++ +E K +S N +++ L + GK E + + EK +
Sbjct: 275 ---KEGMVDRAFEMVRNLELKGSEPDVISYN-ILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ L ++G+++EA+ + L+ E+G+T Y + C+E + +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L ++ G +P + + +A+ C GK + E+ + + G +S +++ S
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 338 NRQIDKAIALHIKIEKLKGSLDV--ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS- 394
+ DK ALH+ +E + +D TY+ ++ L ++G ++EA + M+ + S
Sbjct: 451 SG--DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ IV+ C + A+ + M+ G +P+E TY +I G
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ K R+ +A ++ + + + Y + LC + + +L ++
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + + +G E +L+ +L +GL D F ++++ C +D+A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 346 ALHIKIEKLKGS-LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSR 403
+ +E LKGS DV +Y++LL L G+ EE ++ M K + ++ I+++
Sbjct: 284 EMVRNLE-LKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC ++ +AM M + G PD +Y +I+ F
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 14/272 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G+ E+ R + + G P V + N LL AL Q + L M + PN T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
+S++ LCR GK E + LL + G+ Y+ +I + ++G A + L M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ L P Y+++L + K + + I G + E P S + + L G
Sbjct: 396 SDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS--SSYNTMFSALWSSG 452
Query: 200 -KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS-- 256
K A MI + + I+ + T M+ L +EG V EA ++ L+ R S
Sbjct: 453 DKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFEL--LVDMRSCEFHPSVV 509
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
Y + CK H+ E+ +L +V G P
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + E LL ++ KG D C+ L++ + + R I KA+ + +EK G DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF-GQPDV 158
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
Y+ L++G K R+++A R+ D M+ + ++ I++ LC +L A+K ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 420 MLKMGHKPDEATYKQVISGFM 440
+L +P TY +I M
Sbjct: 219 LLSDNCQPTVITYTILIEATM 239
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
RD+ + C+ E LL +V +GY P + ++ + G + + + +
Sbjct: 88 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIK---GFFTLRNIPKAV 144
Query: 314 SA--VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L+K D F ++L+ +C +ID A + ++ S D TY++++ L
Sbjct: 145 RVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
G+++ A+++ + + + ++ I++ + +A+K DEML G KPD
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 431 TYKQVISG 438
TY +I G
Sbjct: 265 TYNTIIRG 272
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE++ + G P S+ N + AL+ + A + M+ +G+ P++ T++ +
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 91 ILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LCR G FE+++ + + SV+ YN+V+ + K A + L M G
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV-GNGCR 540
Query: 146 PGFSTYSSILDG----ARRYEKTEVSDRIV 171
P +TY+ +++G R E E+++ +V
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ G + + + ++M+ G P + + L+ A R+ + +A M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
DG P+ ++ V LC++GK E+ L + G +S YN + GD
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 131 AFDRLNE-MCNGRNLTPGFSTYSSIL 155
A + E M NG + P TY+S++
Sbjct: 457 ALHMILEMMSNG--IDPDEITYNSMI 480
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 186/404 (46%), Gaps = 11/404 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ ++ G + SA N+L+ + + ++ M +G+ P+ +T++ + L
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229
Query: 94 RS---GKFEVVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
S E V ++D G + +V YN++I Y K G A ++ +M +N+ P
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDM-EMKNVKPDK 288
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY +++ + + M E+ L +P H S VI L K A +
Sbjct: 289 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYS---LVIGGLCKQRKCMEAYAV 345
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F+ + ++ + SK G ++EA++++ + G Y VN LCK
Sbjct: 346 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCK 405
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ ++ L +G AM + + G+ ++ E L + +KG DS+C
Sbjct: 406 SGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC 465
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+++++ + +ID+A+AL ++E+ V T+ +L+DGLFK+ + EEA++ +D M
Sbjct: 466 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 525
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ + + +SF + LC ++ +A K D++ MG P+ A
Sbjct: 526 DKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETA 569
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 128/314 (40%), Gaps = 34/314 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + SLV+ + M+ V+ M G V+ AL+D+ + + A
Sbjct: 318 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 377
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ M +G P+ T+S++ LC+SG+ LD G+
Sbjct: 378 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGR-------LDDGM----------------- 413
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
L + C + + Y+S++DG + + E ++ + M EK +
Sbjct: 414 -------ELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCY 466
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L+ GK A +F R +E + T ++ L KE + +EAI+ + +
Sbjct: 467 --NAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKM 524
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++GIT + + A LC + C +L D+ G IP + + C +
Sbjct: 525 IDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRI 583
Query: 307 KEVEELLSAVLDKG 320
KE +L ++D+G
Sbjct: 584 KEACKLADGIVDRG 597
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 129/298 (43%), Gaps = 6/298 (2%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L+P F T+ +L EK EV+ R ++K H + + +I+ L+
Sbjct: 110 LSPNFVTF--VLQSVELREKPEVAVRFFFWAGKQKKY-VHKIECHVSLIELLTFSADLVK 166
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
++F D + + + ++K+ G V+E + ++ + E GI Y VN
Sbjct: 167 IRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVN 226
Query: 264 VLCKEHQPEEVCGLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L E + +V++ G I P + + + C GK ++ E + K +
Sbjct: 227 GLVNSMFIESAEKVF-EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVK 285
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +L++ S R D ++L++++E+ + +Y +++ GL K + EA +
Sbjct: 286 PDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAV 345
Query: 383 FDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F+ M + ++ + + ++ + +AM+ + M G +PD TY +++G
Sbjct: 346 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGL 403
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 15/279 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D YS G + + ++ M+ GF P + L++ L + + L+
Sbjct: 362 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 421
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
GV+ N ++ + L ++G+ E L + S YN +ID +K G
Sbjct: 422 KGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQ 481
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A F R+ E G + T T++ ++DG + K E + + M++K + P ++
Sbjct: 482 ALALFGRMEE--EGCDQT--VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT--VAS 535
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ L GK A I I + + M+ L K R+KEA ++ I
Sbjct: 536 FRALAIGLCLCGKVARACKILDDLAPMGI-IPETAFEDMINTLCKAQRIKEACKLADGIV 594
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+RG + +N L K + V L+ + GY
Sbjct: 595 DRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGY 633
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 69/280 (24%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + S++++ G DG+E++ R G +L+D L + I
Sbjct: 387 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 446
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+ M G + + + ++ + L + GK + L L
Sbjct: 447 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL--------------------- 485
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
F R+ E G + T T++ ++DG + K E + + M++K + P
Sbjct: 486 ------FGRMEE--EGCDQT--VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITP---- 531
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
T A+ F+ L C C G+V A +I
Sbjct: 532 ---------------TVAS---FR-------ALAIGLCLC--------GKVARACKILDD 558
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ GI + ++ + +N LCK + +E C L +V+RG
Sbjct: 559 LAPMGI-IPETAFEDMINTLCKAQRIKEACKLADGIVDRG 597
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +EV+ M +P N ++D + ++ L MV G+ PN T++++
Sbjct: 214 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLL 273
Query: 90 QILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNE-MCNGRN 143
LCR+G+ LLD + Y+++ D S+ GD A + + NG
Sbjct: 274 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNG-- 331
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+T G T S +L+G + K +++ ++ +V L+P + + +I G+
Sbjct: 332 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY--NTLINGYCQTGELEG 389
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A F + I+ T ++ L K R+ A + + + G+ + ++
Sbjct: 390 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 449
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ Q E+ +L ++ E G P + V + C GK E +L + K +L
Sbjct: 450 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 509
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVLLDGLFKDGRMEEAV 380
++ +++++ Y + D+A L +EK+K S + TY++L+ GL ++ EA
Sbjct: 510 NAQVYNAIIDAYVEHGPNDQAFIL---VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 566
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I + + +++ + S+ ++S C+ + KA+ M K G K TY Q+ISG
Sbjct: 567 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 626
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 182/394 (46%), Gaps = 21/394 (5%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---- 98
VP + L D L R + + L+G +++GV+ +T S++ LC+ GK
Sbjct: 297 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAE 356
Query: 99 EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
EV+ L+++G+ + V+YN +I+ Y + G+ AF +M R++ P TY+++++G
Sbjct: 357 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALING 415
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ E+ + ++ M + + P + + +I G+ ++ + ++
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPT--VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 473
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ G ++ A K G++ EA+ I + + + Y A ++ EH P + +
Sbjct: 474 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV-EHGPNDQAFI 532
Query: 278 LRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ G P + + + C + + E EE+++++ + L+ D+ ++L+ C
Sbjct: 533 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 592
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
IDKA+ L ++ K V TY L+ GL GR+ E ++ M + VV S++
Sbjct: 593 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNA 652
Query: 397 FVIVV-------SRLCHLKELRKAM----KNHDE 419
++ ++LRK M NHD+
Sbjct: 653 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 686
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + + GR +A++++ ++ER + Y ++ K E L +V G
Sbjct: 202 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P A+ + ++ C G+ E LL + + ++ D F S L + +R D
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL--SRNGDSKA 319
Query: 346 ALHIKIEKLKGSLDVATY--DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVS 402
L + + LK + + Y +LL+GL KDG++ A + + +V + + +++
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C EL A +M KPD TY +I+G
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 271 PEEVCGLLRDVVE--RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
P+ LL D+ + R +P + + + G+ +V + G D+F
Sbjct: 104 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 163
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ ++ + + +A+ + ++ + A +Y+V++ G+++ GR +AV +FD M
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 223
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E V+ + ++ ++ +L D+M+ G KP+ TY ++SG
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGL 276
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 187/404 (46%), Gaps = 11/404 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ R GF+ VSA N+L+ + + ++ M +GV P+ FT++ + L
Sbjct: 119 VFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLV 178
Query: 94 RS---GKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
S E VL ++++G V YN +I Y + G AF++ +M RN+ P
Sbjct: 179 NSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDM-ELRNVAPDK 237
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY +++ ++ + M E L +P H S VI L GK +
Sbjct: 238 ITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYS---LVIGGLCKEGKCVEGYAV 294
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F++ + ++ ++ + +K G + EA+ ++ + + G+ Y VN +CK
Sbjct: 295 FEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCK 354
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ +E L G AM S + G+ E E+L ++ KG DS+C
Sbjct: 355 SGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYC 414
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++L++ + D+A+A ++E V TY ++++GLF++ + EEA++++D M
Sbjct: 415 YNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMI 474
Query: 388 ELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ + ++++F + LC ++ +A K DE+ MG P+ A
Sbjct: 475 DKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETA 518
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 136/338 (40%), Gaps = 42/338 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G E +R M + P L+ A Y + + L LY M +G+
Sbjct: 212 YCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIP 271
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAA---FD 133
+SLV LC+ GK + V ++ G +V +Y +ID +K G+ G A F+
Sbjct: 272 PHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFE 331
Query: 134 RLN-------------------------------EMCNGRNLTPGFSTYSSILDGARRYE 162
R+ E C + YSS++DG +
Sbjct: 332 RMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAG 391
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ ++++ MV+K P + + +I L+ GKT A FKR DE + T
Sbjct: 392 RVHEAEKLFEEMVKKGCPPDSYCY--NALIDALAKCGKTDEALAFFKRMEDEGCDQTVYT 449
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
M+ L +E + +EA++++ ++ ++GIT + + A LC + C LL ++
Sbjct: 450 YTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELA 509
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
G IP + C G+ KE +L +D+G
Sbjct: 510 PMGVIP-ETAFEDMLNVLCKAGRIKEACKLADGFVDRG 546
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 38/295 (12%)
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+ +L+G E ++R++ +M K+ P + + +I+ +GKT A
Sbjct: 165 PSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPD--VVTYNTMIKGYCQVGKTQKAF 222
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
F+ + T +++A EG + +YH + E G+ + Y + L
Sbjct: 223 EKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGL 282
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CKE + E + ++++G C + ++ + A L+DS
Sbjct: 283 CKEGKCVEGYAVFEKMIQKG---CKVNVAIYTA-----------------------LIDS 316
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
C N + +A+ L +++K DV TY V+++ + K GR++EA+ ++
Sbjct: 317 -------NAKCGN--MGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEF 367
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V V++ + ++ L + +A K +EM+K G PD Y +I
Sbjct: 368 CRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDAL 422
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 48/288 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + +V++C G + +E RV G ++L+D L + +
Sbjct: 336 EGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHE 395
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+ MV+ G P+ + ++ + L + GK + L
Sbjct: 396 AEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEAL----------------------- 432
Query: 126 GDFGAAFDRL-NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A F R+ +E C+ TY+ +++G R K E + ++ +M++K + P
Sbjct: 433 ----AFFKRMEDEGCDQT-----VYTYTIMINGLFREHKNEEALKMWDMMIDKGITP--- 480
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL------QDDTCGCMLKALSKEGRVKE 238
+ LS +G + ++ RAC EL + ML L K GR+KE
Sbjct: 481 ---TAAAFRALS-IGLCLSGKV--ARACKLLDELAPMGVIPETAFEDMLNVLCKAGRIKE 534
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
A ++ +RG + +N L K + L+ + GY
Sbjct: 535 ACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGY 582
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K+ G V+E + ++ + E G+ Y +N L E +L +V+E G
Sbjct: 138 LIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL-EVMENG 196
Query: 286 YI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
I P + + + C GK ++ E + + + D +L++ + D
Sbjct: 197 KIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLC 256
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSR 403
++L+ ++++ + Y +++ GL K+G+ E +F+ M + V+ + + ++
Sbjct: 257 LSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDS 316
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +AM + M K G +PD TY V++
Sbjct: 317 NAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVN 350
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +EV+ M +P N ++D + ++ L MV G+ PN T++++
Sbjct: 33 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 92
Query: 90 QILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNE-MCNGRN 143
LCR+G+ LLD + Y+++ D S+ GD A + + NG
Sbjct: 93 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG-- 150
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+T G T S +L+G + K +++ ++ +V L+P + + +I G+
Sbjct: 151 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY--NTLINGYCQTGELEG 208
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A F + I+ T ++ L K R+ A + + + G+ + ++
Sbjct: 209 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 268
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ Q E+ +L ++ E G P + V + C GK E +L + K +L
Sbjct: 269 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 328
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVLLDGLFKDGRMEEAV 380
++ +++++ Y + D+A L +EK+K S + TY++L+ GL ++ EA
Sbjct: 329 NAQVYNAIIDAYVEHGPNDQAFIL---VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 385
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I + + +++ + S+ ++S C+ + KA+ M K G K TY Q+ISG
Sbjct: 386 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 182/394 (46%), Gaps = 21/394 (5%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---- 98
VP + L D L R + + L+G +++GV+ +T S++ LC+ GK
Sbjct: 116 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 175
Query: 99 EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
EV+ L+++G+ + V+YN +I+ Y + G+ AF +M R++ P TY+++++G
Sbjct: 176 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALING 234
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ E+ + ++ M + + P + + +I G+ ++ + ++
Sbjct: 235 LCKAERITNAQDLLMEMQDNGVNPT--VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ G ++ A K G++ EA+ I + + + Y A ++ EH P + +
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV-EHGPNDQAFI 351
Query: 278 LRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ G P + + + C + + E EE+++++ + L+ D+ ++L+ C
Sbjct: 352 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 411
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
IDKA+ L ++ K V TY L+ GL GR+ E ++ M + VV S++
Sbjct: 412 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 471
Query: 397 FVIVV-------SRLCHLKELRKAM----KNHDE 419
++ ++LRK M NHD+
Sbjct: 472 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 505
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + + GR +A++++ ++ER + Y ++ K E L +V G
Sbjct: 21 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 80
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P A+ + ++ C G+ E LL + + ++ D F S L + N +
Sbjct: 81 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 140
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
+L K K ++ T +LL+GL KDG++ A + + +V + + +++
Sbjct: 141 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 200
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C EL A +M KPD TY +I+G
Sbjct: 201 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 235
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
+Y+V++ G+++ GR +AV +FD M E V+ + ++ ++ +L + D+M
Sbjct: 17 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 76
Query: 421 LKMGHKPDEATYKQVISGF 439
+ G KP+ TY ++SG
Sbjct: 77 VCHGLKPNAITYNVLLSGL 95
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 196/470 (41%), Gaps = 44/470 (9%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S S ++ + GL + E + MR + +P +CN LL L + +L
Sbjct: 158 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 217
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSK 124
+ M+ G++P+ FT++++ LC+ G E + + + + G+ V+ YN +ID Y K
Sbjct: 218 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277
Query: 125 KG-------------DFGA----------------------AFDRLNEMCNGRNLTPGFS 149
G D G AF+ +EM N L P
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN-GLKPNVV 336
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TYS+++D + + + +++ M LLP F + +I G A +
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS--LIDANCKAGNLTEAWKLLN 394
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++L T +L L K GR+ EA +++ + + GI+ Y A V+ K
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E+ +L+ + E P + + C + K +E + +L + +G+ + +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++++ Y + A+ +++ + + TY VL+DGL + G +E AV F M L
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + + + ++ LC + A K DEM G PD + +I G
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++++ +LS G F I T M+ L KEG ++ + +++ + E
Sbjct: 199 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 258
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G++ Y + ++ K EEV L ++ + G +P + + + C K
Sbjct: 259 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 318
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E S + + GL + S+L++ +C + AI L + + + TY L+D
Sbjct: 319 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLID 378
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K G + EA ++ + M + V ++ ++ ++ LC + +A + MLK G P
Sbjct: 379 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 438
Query: 428 DEATYKQVISGFM 440
++ Y ++ G++
Sbjct: 439 NQQVYTALVHGYI 451
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
C L R S+ G G+ V + + ++ G+ F + +++Y C ++ + L
Sbjct: 198 CNFLLHRL--SKSGNGQL--VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF 253
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL 407
+++ ++ S DV TY+ L+DG K G +EE +F+ MK++ V ++ +++ C
Sbjct: 254 VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKF 313
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +A + EM G KP+ TY +I F
Sbjct: 314 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P +S ++DA ++ + A + M GV T+ ++ LC +G E+ +
Sbjct: 510 PVIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDY 567
Query: 104 ---LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+L G+ +V +Y +ID +A +EM R +TP + +++++DG
Sbjct: 568 FCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM-QCRGMTPDITAFTALIDGNL 626
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + + ++ M E L + L ++ S G+ + A F ++ I +
Sbjct: 627 KHGNLQEALVLISRMTE--LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684
Query: 220 DDTCGCMLKALSKEGRVKEAIQI 242
+ C C+L+ K G++ EAI++
Sbjct: 685 EVLCICLLREYYKRGQLDEAIEL 707
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 190/416 (45%), Gaps = 17/416 (4%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY M G P V N L+ AL R +++R A + M GV+P++ T++ + Q
Sbjct: 184 VYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFI 243
Query: 94 RSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPG 147
G E L ++++G + V N++I+ Y K G A + E+ +G P
Sbjct: 244 EEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG--FEPD 301
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY++ + G + + +++ LM+++ P F + VI LS G+ A+ I
Sbjct: 302 QVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY--NTVINCLSKNGELDEAKGI 359
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF---VNV 264
+ D T ++ ALS + R++EA+ + ++ +G++ D Y F +N
Sbjct: 360 VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLS---PDVYTFNILINA 416
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK P L ++ G P + + + C GK +LL+ + G
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +++++ C +I++A + +++ S T++ L+DGL K R+++A + +
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536
Query: 385 YM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M KE ++ ++ +++ C ++KA + M G + D TY +I+G
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 181/438 (41%), Gaps = 9/438 (2%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + ++ + +G L V M G P N L++ + +
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLV 118
A + DG P++ T++ LC++G L ++D + YN V
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I+ SK G+ A +N+M + R P +T+++++ + E + + + K
Sbjct: 344 INCLSKNGELDEAKGIVNQMVD-RGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L P + + +I L +G + +F+ + T ++ L G++
Sbjct: 403 LSPDVYTF--NILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGN 460
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + + + G Y ++ LCK+ + EE + + +G A+ + +
Sbjct: 461 ALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLID 520
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C + + EL+ ++ +GL ++ +S++ +YC I KA + + +
Sbjct: 521 GLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
DV TY L++GL K GR + A+++ M+ + + ++ V+ L LR A+
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF 640
Query: 418 DEMLKMGHKPDEATYKQV 435
EM ++G PD TYK V
Sbjct: 641 REMTEVGEPPDALTYKIV 658
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 45/392 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D + V++C S G + + M G +P + N L+ AL QN +
Sbjct: 331 EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEE 390
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SG-IYSSVMYNLVID 120
A L + G+SP+ +T++++ LC+ G + + L + SG V YN++ID
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450
Query: 121 FYSKKGDFGAAFDRLNEM-CNG---------------------------------RNLTP 146
G G A D LNEM NG + ++
Sbjct: 451 HLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
T+++++DG + ++ + + ++ MV++ L P + + ++ G A
Sbjct: 511 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS--ILTHYCKQGNIKKAAD 568
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
I + E+ T G ++ L K GR + A+++ + +GI Y + L
Sbjct: 569 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 628
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC-GKGKWKEVEELLSAVLDKGLLLDS 325
+ + + L R++ E G P A+ S C G G KE + L +++KG + +
Sbjct: 629 RRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE- 687
Query: 326 FCCSSLMEYYCSNRQIDKAI--ALHIKIEKLK 355
F ++ N +D + A+ + IEK K
Sbjct: 688 FSSFRMLAEGLLNLGMDDYLISAIELIIEKAK 719
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 183/411 (44%), Gaps = 21/411 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLA-SCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
+RVY A+S + LL AL Q++ A L A+ R+ +P+ + + Q L +G
Sbjct: 48 LRVY----AISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAG 103
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDR-LNEMCNGR-NLTPGFS 149
F+++ GL+ + +V+ ++ Y++ F A D LN++ N +
Sbjct: 104 AFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTV 163
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
++ +L+ K ++ + + M + + P + + +I+ L + A ++ +
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPD--VVTLNTLIKALCRAHQVRTAVLMLE 221
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + T +++ +EG ++ A+++ + E G + +N CK
Sbjct: 222 EMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMG 281
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E+ G ++ + G+ P + + FV C G +++ +L +G D F +
Sbjct: 282 RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 341
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+++ N ++D+A + ++ D T++ L+ L R+EEA+ D +EL
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL---DLAREL 398
Query: 390 KVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
V S +F I+++ LC + + ++ +EM G PDE TY +I
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ +NVL + + + + + ++ RG P + L+ + + C + + +L +
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G+ D ++LM+ + I+ A+ + K+ + S T +VL++G K GR+E
Sbjct: 225 SHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVE 284
Query: 378 EAV-----RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+A+ I D + +V ++ V LC + A+K D ML+ GH PD TY
Sbjct: 285 DALGYIQQEIADGFEPDQV----TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340
Query: 433 KQVIS 437
VI+
Sbjct: 341 NTVIN 345
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 11/193 (5%)
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWKEVEELLS 314
SD + L ++ PE +L + R + P + V G + +E L+
Sbjct: 54 SDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVR 113
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL---HIKIEKLKGSLDVATYDVLLDGLF 371
+ +G + + S +E Y R+ D A+ L + + D ++ LL+ L
Sbjct: 114 EMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLV 173
Query: 372 KDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+ +++ +++ M + VV+ ++ ++ LC ++R A+ +EM G P
Sbjct: 174 EGSKLKLLESVYNEMTGRGIQPDVVTLNT---LIKALCRAHQVRTAVLMLEEMSSHGVAP 230
Query: 428 DEATYKQVISGFM 440
DE T+ ++ GF+
Sbjct: 231 DETTFTTLMQGFI 243
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 189/441 (42%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + L+++++C+ G V + G P + L++ L + E A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDF 121
L+ MV G P+ +T++ + LC+ G+ GL+ + G V+ Y+ +ID
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDS 240
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K A D + M + ++P +Y+S++ G + + + + ++ M ++P
Sbjct: 241 LCKDRLVNEALDIFSYM-KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I G A+ + K + +E T ++ S + V EA +
Sbjct: 300 D--IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARK 357
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ ++ RG Y +N C + +E L +++ +G P + + + + C
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK +E EL + G L D S L+E +C + KA L ++ ++
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477
Query: 362 TYDVLLDGLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
Y +L+D + K G + A ++F ++ L+ + +++ LC L +A++ +
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQ-PDVQIYTTIINGLCKEGLLDEALEAFRK 536
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M + G P+E +Y +I GF+
Sbjct: 537 MEEDGCPPNEFSYNVIIRGFL 557
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 111/279 (39%), Gaps = 8/279 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
SL++D + +G ++ V + M G P V N+L+ Q E+ A L+ M
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
+ G P+ F++S++ C + + L + I+ ++V Y +I + + G
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + +M L P TYS +L+G + + R+ M L P L
Sbjct: 423 REARELFKDMHTNGYL-PDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN--LVMY 479
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I + G A +F ++ ++ L KEG + EA++ + + E
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
G + Y + + L+ ++ ++G++
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + ++ + G + E+++ M G++P + + LL+ +Q +
Sbjct: 400 QGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGK 459
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVID 120
A L+ AM + PN ++++ +C+SG L G+ V +Y +I+
Sbjct: 460 AFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIIN 519
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
K+G A + +M P +Y+ I+ G +++ + +++G M +K
Sbjct: 520 GLCKEGLLDEALEAFRKM-EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575
>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 207/479 (43%), Gaps = 49/479 (10%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C + DAL V C K + +V R +R+ GF + A N L+ L + E
Sbjct: 140 CNSNPAVFDAL--VRTCTQLKSV-EGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETD 196
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVI 119
+Y MV G S N T++L+ LC+ K VV +L I+ +V+ +N++I
Sbjct: 197 KFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMII 256
Query: 120 DFYSKKG--DFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKT---------- 164
D SK G D R E+ +G +++P TY+ I++G RR E
Sbjct: 257 DKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKL 316
Query: 165 ----------------------EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+V+ R+ MVE +L+P + + +I L G+
Sbjct: 317 GIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNS--LIYWLYIEGELE 374
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + +I + T + K L G + +A+++++ I ER + + +
Sbjct: 375 EASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILI 434
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N + + LL ++ RG P + VA C +GK + ++ +
Sbjct: 435 NYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGK 494
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ +S+++ C ID A L K+++ G LD TY+ LL G +G +E+A +
Sbjct: 495 SNLVVYNSILDGLCKQGSIDAARLLVDKLQQ-NGFLDSVTYNTLLHGFCVNGEVEKAFAL 553
Query: 383 FDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
F M + +V+ S+ I+++ LC + +++AM+ M G PD TY +I+ F+
Sbjct: 554 FLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFV 612
>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
Length = 821
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 172/388 (44%), Gaps = 24/388 (6%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G +D L R M G V + + L+D L R+ I A L G M+++G+ PN
Sbjct: 103 YFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPN 162
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + + LC+ GK E L D GI +Y +ID KKG+ AF L
Sbjct: 163 LITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLG 222
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M R + P TY+++++G R E ++S +VG ++ L ++
Sbjct: 223 DM-EQRGIQPSILTYNTVINGLCKAGRVSEADDISKGVVGDVITYSTLLDSYV------- 274
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
K+ ++ A I +R + KI + C +LKA G EA +Y + E G+T
Sbjct: 275 -KVENID---AVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLT 330
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y + CK Q E+ + + + + + A+ + + + C KG + E+
Sbjct: 331 PDTATYATMIEGYCKTGQIEDALEMFNE-LRKSSVSAAVCYNHIIDALCKKGMLETAMEV 389
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L + +KGL LD +L+ +N + L K+E+L + + + + L
Sbjct: 390 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCN 449
Query: 373 DGRMEEAVRIFDYM--KELKVVSSSSFV 398
G E A+ ++ M K+L V S+ +
Sbjct: 450 RGSFEAAIEVYMIMMRKDLTVTFPSTIL 477
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 185/417 (44%), Gaps = 20/417 (4%)
Query: 30 DGLEVYRMMRV----YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFT 84
+ +EV MM Y F VS+ A++ + + LA + V GV PN T
Sbjct: 3 NAIEVLEMMTNKKVNYPFDNFVSS--AVISGFCKIGKPELALGFFETAVDSGVLVPNLVT 60
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V LC+ GK + V L+ D G + V Y+ I Y K G A + +M
Sbjct: 61 YTAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMV 120
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ + +YS ++DG R E + ++G M+++ + P L +I+ L G
Sbjct: 121 E-KGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPN--LITYTAIIRGLCKKG 177
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A ++F R IE+ + ++ + K+G + A + + +RGI Y
Sbjct: 178 KLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYN 237
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N LCK + E D + +G + + S + S V E+ ++
Sbjct: 238 TVINGLCKAGRVSEA-----DDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEA 292
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ +D C+ L++ + +A AL+ + ++ + D ATY +++G K G++E+A
Sbjct: 293 KIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDA 352
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +F+ +++ V ++ + ++ LC L AM+ E+ + G D T + ++
Sbjct: 353 LEMFNELRKSSVSAAVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLL 409
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 182/468 (38%), Gaps = 93/468 (19%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLF--------MDGLEVYRMMRVYGFVPA-VSACNALLD 55
GR S++D +S +V D ++ L +D + R V +P + CN LL
Sbjct: 247 GRVSEADDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLK 306
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS 111
A A LY AM G++P+ T++ + + C++G+ E L + + S + +
Sbjct: 307 AFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRKSSVSA 366
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMC---------NGRNLTPGFSTYSS---ILDGAR 159
+V YN +ID KKG A + L E+ R L ILD
Sbjct: 367 AVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDLVY 426
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA---EMIFKRACDEKI 216
+ E+ SD +G++ + LL L + G AA MI R
Sbjct: 427 KVEQLN-SDICLGMLNDAILL--------------LCNRGSFEAAIEVYMIMMRK----- 466
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS----DYYAFVNVLCKEHQPE 272
+L +LK L R +A Y L+ G T S DY +N LCKE
Sbjct: 467 DLTVTFPSTILKTLVDNLRSLDA---YLLVVNAGETTLSSMDVIDYTIIINGLCKE---- 519
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
G++ A++L F S KG+ L++ +SL+
Sbjct: 520 ------------GFLVKALDLCNFAKS-------------------KGVTLNTITYNSLI 548
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C + +A+ L ++ + TY +L+D L K+G +A ++ D M +V
Sbjct: 549 NGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 608
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + +V C L + AM+ + KPD T +I G+
Sbjct: 609 PNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGY 656
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/478 (19%), Positives = 190/478 (39%), Gaps = 59/478 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L + G + + +YR M G P + +++ + +I A ++ + +
Sbjct: 302 NILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRK 361
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVMYN--LVIDFYSKKGDFG 129
VS ++ + LC+ G EV++ L + G+Y + + L+ ++ GD G
Sbjct: 362 SSVSA-AVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 420
Query: 130 A-----AFDRLNE-------------MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
++LN +CN + Y ++ R+ I+
Sbjct: 421 ILDLVYKVEQLNSDICLGMLNDAILLLCNRGSFEAAIEVYMIMM---RKDLTVTFPSTIL 477
Query: 172 GLMVEK-KLLPKHFLSGN------------DY--VIQKLSDMGKTYAAEMIFKRACDEKI 216
+V+ + L + L N DY +I L G A + A + +
Sbjct: 478 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGV 537
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L T ++ L ++G + EA++++ + G+ + Y ++ LCKE +
Sbjct: 538 TLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEK 597
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL +V +G +P + + V C G+ ++ +LS + + D+F SS+++ YC
Sbjct: 598 LLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYC 657
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM---------- 386
+++A+ + + ++ S D + L+ GRMEEA + M
Sbjct: 658 KKGDMEEALRVFAEFKEENISADFLGFLFLIKCFCTKGRMEEARGLLREMLVSESVVKLI 717
Query: 387 --KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM----GHKPDEATYKQVISG 438
+ ++V S S + LC + +A+K DE+ G P Q ++G
Sbjct: 718 NRVDAELVESESIRGFLVELCEQGRVPQAIKILDEISSTIYLSGKNPGSYQRLQFLNG 775
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ K G+ + A+ + + G+ V + Y A V+ LC+ + +EV L+R + +
Sbjct: 28 VISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAVVSALCQLGKVDEVRDLVRRLEDE 87
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G+ + S ++ G + +++KG+ D S L++ I+KA
Sbjct: 88 GFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIEKA 147
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSR 403
+ L K+ K ++ TY ++ GL K G++E+A +FD + + V +V ++
Sbjct: 148 LGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDG 207
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+C L +A +M + G +P TY VI+G
Sbjct: 208 ICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 243
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 141/319 (44%), Gaps = 28/319 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G + L++ + G N+L++ L +Q + A L+ ++
Sbjct: 510 TIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDN 569
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGA 130
G+ P++ T+ ++ LC+ G F LLDS G+ +++ YN ++D Y K G
Sbjct: 570 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTED 629
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L+ GR + P T SSI+ G + E + R+ E+ + FL G +
Sbjct: 630 AMRVLSRKMMGR-VKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEEN-ISADFL-GFLF 686
Query: 191 VIQKLSDMGKTYAA-----EMIFKRACDEKIE------LQDDTCGCMLKALSKEGRVKEA 239
+I+ G+ A EM+ + + I ++ ++ L L ++GRV +A
Sbjct: 687 LIKCFCTKGRMEEARGLLREMLVSESVVKLINRVDAELVESESIRGFLVELCEQGRVPQA 746
Query: 240 IQIYHLISER-GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
I+I IS ++ ++ Y + L ++ E + + Y+ L ++
Sbjct: 747 IKILDEISSTIYLSGKNPGSYQRLQFLNGVNEKE--------IKKEDYVHDFHSLHSTIS 798
Query: 299 SQCGKGKWKEVEELLSAVL 317
S C GK ++ E + +VL
Sbjct: 799 SLCTSGKLEQANEFVMSVL 817
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 195/432 (45%), Gaps = 10/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ L+L ++ G L+V+ MR G ++ +CN++L+ L + ++ ++ M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 74 VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDF 128
R G P+KFT +++A+ C+ E V + G+ + V Y+ V++ Y + G
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG-LMVEKKLLPKHFLSG 187
A R+ + GR +P TY+ ++ G + E ++ +V + K+L+ + G
Sbjct: 295 NDA-RRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFG 353
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
VI MG+ A + D ++++ M+ K GR+ EA I H ++
Sbjct: 354 A--VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G+ Y + V+ CK+ + ++ G+ + + + C G
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ L +L KG+ + CS+L++ + + + +KA+ L + + + T++ ++
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
+GL K RM EA + D MK+ + ++ + S C + ++ +A + +E+ +G
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA 591
Query: 427 PDEATYKQVISG 438
P + +I+G
Sbjct: 592 PTIEFFNSLITG 603
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 186/443 (41%), Gaps = 35/443 (7%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L ++ +M G P +C+ LLD ++ + A L+ + G++ N T++ V
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531
Query: 90 QILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ + L+D + Y + Y K GD A LNE+ N
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELEN-LGF 590
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P ++S++ G ++ + I+ M + L P G +I G + A
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGA--LIAGWCKEGDLHTA 648
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA-IQIYHLISERGI------------ 251
++ ++ + C ++ ++G+ EA + + +L+ I
Sbjct: 649 YNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGK 708
Query: 252 ------TVRDSDYYA---FVNV----LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
TV ++++ N+ LCK + E+ LL D+ ++G++ S +
Sbjct: 709 VANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIH 768
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G +L +L GL + +SL+ C + ++ +A++L K+ S
Sbjct: 769 GCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISP 828
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
+ TY+ L+D KDG + EA ++ M E + + ++ I+++ LC + +A+K
Sbjct: 829 NAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLL 888
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
D+M++ P+ TY +I G++
Sbjct: 889 DQMIENNVDPNYVTYWTLIQGYV 911
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 144/355 (40%), Gaps = 48/355 (13%)
Query: 93 CRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G+ E LL+ + S + +YN++I+ Y K G A + L+EM G + P
Sbjct: 360 CQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM-TGVGVRPD 418
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+Y+S++DG +K L+ K F + N + + TY A
Sbjct: 419 TYSYNSLVDG----------------YCKKGLMNKAFETYNTMLRNGFAATTLTYNA--- 459
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+LK G + +A++++ L+ ++GI + ++ K
Sbjct: 460 ------------------LLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFK 501
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ E+ L ++ + RG + + C + E EEL+ + D
Sbjct: 502 SGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIIT 561
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF---KDGRMEEAVRIFD 384
+L YC +D+A + ++E L + + ++ L+ G F + G++ + +F+
Sbjct: 562 YRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI--LFE 619
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ +++ C +L A + EM++ G P+ ++S F
Sbjct: 620 MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 170/435 (39%), Gaps = 67/435 (15%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SGI 109
A+++ + + A+ L MV + N F ++++ C+ G+ +L +G+
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV 413
Query: 110 ---YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS----TYSSILDGARRYE 162
+ YN ++D Y KKG AF+ N M L GF+ TY+++L G
Sbjct: 414 GVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM-----LRNGFAATTLTYNALLKGFCSLG 468
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ + R+ LM++K + P ++ GKT A ++K + T
Sbjct: 469 SIDDALRLWFLMLKKGIAPNEISCST--LLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526
Query: 223 CGCMLKALSKEGRVKEA---------------IQIYHLISERGITVRDSDYYA------- 260
++ L K R+ EA I Y + + D D +
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586
Query: 261 ---------FVNVLCKEH----QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
F N L H Q +V +L ++ RG P + +A C +G
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
L +++KGL+ + F CSSL+ + + D+A ++ ++ L G+ D++
Sbjct: 647 TAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA---NLVLQNLVGT------DMIP 697
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSS----FVIVVSRLCHLKELRKAMKNHDEMLKM 423
D R+E ++ +++ + + S + IV+ LC L + A ++
Sbjct: 698 D--ISAPRLEIG-KVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK 754
Query: 424 GHKPDEATYKQVISG 438
G D TY +I G
Sbjct: 755 GFVADNFTYSSLIHG 769
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 11/287 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + A ++ + +G +Y M G VP + C++L+ YR+ +
Sbjct: 621 SNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF 680
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS--VMYNLVIDF 121
A+ + +V + P+ ++ GK + + G + S +M+N+VI
Sbjct: 681 DEANLVLQNLVGTDMIPD------ISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFG 734
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G A + L ++ + + F TYSS++ G +V+ + M+ L P
Sbjct: 735 LCKLGRIEDAKNLLADLKDKGFVADNF-TYSSLIHGCSASGFVDVAFDLRDTMLSVGLTP 793
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +I L G+ A +FK+ + I T ++ K+G + EA +
Sbjct: 794 N--IVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFK 851
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + E GI Y +N LC + EE LL ++E P
Sbjct: 852 LKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDP 898
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/304 (18%), Positives = 125/304 (41%), Gaps = 7/304 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P A AL+ ++ ++ A LY M+ G+ PN F S + R GKF+
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683
Query: 102 LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+L + + + +++ D + + + G + ++ + G + + ++ ++ G +
Sbjct: 684 NLVLQNLVGT----DMIPDISAPRLEIGKVANFIDTVAGGNHHSAKI-MWNIVIFGLCKL 738
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ E + ++ + +K + +F + +I S G A + +
Sbjct: 739 GRIEDAKNLLADLKDKGFVADNFTYSS--LIHGCSASGFVDVAFDLRDTMLSVGLTPNIV 796
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L K G + A+ ++ + +GI+ Y ++ CK+ E L + +
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+E G P S + C +G +E +LL +++ + + +L++ Y +
Sbjct: 857 IEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESV 916
Query: 342 DKAI 345
D I
Sbjct: 917 DVPI 920
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 202/474 (42%), Gaps = 45/474 (9%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G A+S ++D +G D E+ + +GFVP + NAL+++L + ++ A
Sbjct: 325 GFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKA 384
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDF 121
LY M + PN T+S++ CRSG+ +V + D GI +V YN +I+
Sbjct: 385 ELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLING 444
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K GD AA EM N + + P +T++S++ G + + + + ++ M++ + P
Sbjct: 445 QCKFGDLSAAESLFIEMTN-KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITP 503
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I L K A +F + KI+ + T +++ ++G++ +A +
Sbjct: 504 NVYTF--TALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + ++G+ Y ++ LC + + + D+ ++ M S + C
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYC 621
Query: 302 GKGKWKEVE-----------------------------------ELLSAVLDKGLLLDSF 326
+G+ E +LL + D+GL D+
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+S+++ Y KA + + +V TY L++GL K G M+ A +F M
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM 741
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V +S ++ + L +++A+ H MLK G + T+ +I GF
Sbjct: 742 QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGF 794
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 174/421 (41%), Gaps = 50/421 (11%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F G+++ M GF P +A + L+D L +Q +I A L + R G PN F ++
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370
Query: 88 VAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ LC+ G + LL S + S+M NL P
Sbjct: 371 LINSLCKGGDLDKA-ELLYSNM--SLM----------------------------NLRPN 399
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYS ++D R + +V+ M++ + + + +I G AAE +
Sbjct: 400 GITYSILIDSFCRSGRLDVAISYFDRMIQDGI--GETVYAYNSLINGQCKFGDLSAAESL 457
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F ++ +E T ++ K+ +V++A ++Y+ + + GIT + A ++ LC
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
++ E L ++VER P + + + C GK + ELL + KGL+ D++
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYT 577
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
L+ CS ++ KA + K L+ Y LL G ++GR+ EA+ M
Sbjct: 578 YRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMI 637
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHD---------EMLKMGHKPDEATYKQVISG 438
+ I + +CH + A+K D +M G +PD Y +I
Sbjct: 638 QRG--------INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDT 689
Query: 439 F 439
+
Sbjct: 690 Y 690
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 140/337 (41%), Gaps = 9/337 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ Y G E+ M G VP L+ L + A + +
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK 603
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
V N+ +S + C+ G+ L ++ GI V + ++ID K+ D
Sbjct: 604 QNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKT 663
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
FD L +M + + L P Y+S++D + + + LMV ++ P +
Sbjct: 664 FFDLLKDM-HDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN--VVTYTA 720
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L G+ A ++FKR + T GC L L+KEG +KEAI ++H + +G
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KG 779
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + + CK + E +L ++ E G P + S + C G
Sbjct: 780 LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+L +L++GL D + L+ C N ++DKA L
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFEL 876
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 178/429 (41%), Gaps = 45/429 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + +L+ + +++ A LY M+ +G++PN +T++ + LC + K
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L D + + V YN++I+ Y + G AF+ L +M + + L P TY ++
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM-HQKGLVPDTYTYRPLIS 583
Query: 157 G---ARRYEKTE-----------------VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
G R K + S + G E +L+ LS + +IQ+
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEA--LSASCEMIQRGI 641
Query: 197 DMGKTYAAEMI---------------FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+M A +I K D+ + + M+ SKEG K+A +
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ L+ Y A +N LCK + + L + + P ++ F+ +
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+G KE L A+L KGLL ++ + ++ +C + +A + ++ + D
Sbjct: 762 KEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCV 820
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEM 420
TY L+ + G + +V+++D M + ++ +++ C EL KA + D+M
Sbjct: 821 TYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDM 880
Query: 421 LKMGHKPDE 429
L+ G PD
Sbjct: 881 LRRGIIPDN 889
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 3/300 (1%)
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
NL P T S++L+G + K + V + P + V++ + ++
Sbjct: 183 ANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSA--VVRSMCELKD 240
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A+ + +L T ++ L K RV EA+++ + +G+ Y
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
V C+ Q E L+ ++VE G+ P +S V +GK + EL+ V G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + F ++L+ C +DKA L+ + + + TY +L+D + GR++ A+
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
FD M + + + ++ +++ C +L A EM G +P T+ +ISG+
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +EV+ M +P N ++D + ++ L MV G+ PN T++++
Sbjct: 81 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 140
Query: 90 QILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNE-MCNGRN 143
LCR+G+ LLD + Y+++ D S+ GD A + + NG
Sbjct: 141 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG-- 198
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+T G T S +L+G + K +++ ++ +V L+P + + +I G+
Sbjct: 199 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY--NTLINGYCQTGELEG 256
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A F + I+ T ++ L K R+ A + + + G+ + ++
Sbjct: 257 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ Q E+ +L ++ E G P + V + C GK E +L + K +L
Sbjct: 317 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 376
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVLLDGLFKDGRMEEAV 380
++ +++++ Y + D+A L +EK+K S + TY++L+ GL ++ EA
Sbjct: 377 NAQVYNAIIDAYVEHGPNDQAFIL---VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 433
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I + + +++ + S+ ++S C+ + KA+ M K G K TY Q+ISG
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 493
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 182/394 (46%), Gaps = 21/394 (5%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---- 98
VP + L D L R + + L+G +++GV+ +T S++ LC+ GK
Sbjct: 164 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 223
Query: 99 EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
EV+ L+++G+ + V+YN +I+ Y + G+ AF +M R++ P TY+++++G
Sbjct: 224 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALING 282
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ E+ + ++ M + + P + + +I G+ ++ + ++
Sbjct: 283 LCKAERITNAQDLLMEMQDNGVNPT--VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ G ++ A K G++ EA+ I + + + Y A ++ EH P + +
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV-EHGPNDQAFI 399
Query: 278 LRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ G P + + + C + + E EE+++++ + L+ D+ ++L+ C
Sbjct: 400 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 459
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
IDKA+ L ++ K V TY L+ GL GR+ E ++ M + VV S++
Sbjct: 460 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 519
Query: 397 FVIVV-------SRLCHLKELRKAM----KNHDE 419
++ ++LRK M NHD+
Sbjct: 520 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 553
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + + GR +A++++ ++ER + Y ++ K E L +V G
Sbjct: 69 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P A+ + ++ C G+ E LL + + ++ D F S L + N +
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
+L K K ++ T +LL+GL KDG++ A + + +V + + +++
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C EL A +M KPD TY +I+G
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 283
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA-T 362
G+ +V + G D+F + ++ + + +A+ + ++ + A +
Sbjct: 6 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y+V++ G+++ GR +AV +FD M E V+ + ++ ++ +L + D+M+
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 422 KMGHKPDEATYKQVISGF 439
G KP+ TY ++SG
Sbjct: 126 CHGLKPNAITYNVLLSGL 143
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 17/420 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +EV+ M +P N ++D + ++ L MV G+ PN T++++
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 277
Query: 90 QILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNE-MCNGRN 143
LCR+G+ LLD + Y+++ D S+ GD A + + NG
Sbjct: 278 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG-- 335
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+T G T S +L+G + K +++ ++ +V L+P + + +I G+
Sbjct: 336 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY--NTLINGYCQTGELEG 393
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A F + I+ T ++ L K R+ A + + + G+ + ++
Sbjct: 394 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 453
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ Q E+ +L ++ E G P + V + C GK E +L + K +L
Sbjct: 454 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 513
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVLLDGLFKDGRMEEAV 380
++ +++++ Y + D+A L +EK+K S + TY++L+ GL ++ EA
Sbjct: 514 NAQVYNAIIDAYVEHGPNDQAFIL---VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 570
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I + + +++ + S+ ++S C+ + KA+ M K G K TY Q+ISG
Sbjct: 571 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 630
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 182/394 (46%), Gaps = 21/394 (5%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---- 98
VP + L D L R + + L+G +++GV+ +T S++ LC+ GK
Sbjct: 301 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 360
Query: 99 EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
EV+ L+++G+ + V+YN +I+ Y + G+ AF +M R++ P TY+++++G
Sbjct: 361 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALING 419
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ E+ + ++ M + + P + + +I G+ ++ + ++
Sbjct: 420 LCKAERITNAQDLLMEMQDNGVNPT--VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ G ++ A K G++ EA+ I + + + Y A ++ EH P + +
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV-EHGPNDQAFI 536
Query: 278 LRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ G P + + + C + + E EE+++++ + L+ D+ ++L+ C
Sbjct: 537 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 596
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
IDKA+ L ++ K V TY L+ GL GR+ E ++ M + VV S++
Sbjct: 597 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 656
Query: 397 FVIVV-------SRLCHLKELRKAM----KNHDE 419
++ ++LRK M NHD+
Sbjct: 657 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 690
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + + GR +A++++ ++ER + Y ++ K E L +V G
Sbjct: 206 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P A+ + ++ C G+ E LL + + ++ D F S L + N +
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
+L K K ++ T +LL+GL KDG++ A + + +V + + +++
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C EL A +M KPD TY +I+G
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 271 PEEVCGLLRDVVE--RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
P+ LL D+ + R +P + + + G+ +V + G D+F
Sbjct: 108 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 167
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ ++ + + +A+ + ++ + A +Y+V++ G+++ GR +AV +FD M
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 227
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E V+ + ++ ++ +L + D+M+ G KP+ TY ++SG
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 280
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 181/436 (41%), Gaps = 48/436 (11%)
Query: 14 ALSLVLD----CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
A S+++D Y G LE + YGF + +CN +L +L ++ I + +
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSK 124
Y M+R + N T+ +V LC+ GKF+ VV + G SV+ YN +ID Y K
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A L EM R + P T++ ++DG R E + ++ M + L P
Sbjct: 277 AGKMFKADALLKEMVAKR-IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
T ++ L G++ EA+ +
Sbjct: 336 -------------------------------------TYNSLINGLCSNGKLDEALGLQD 358
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+S G+ Y A +N CK+ +E +L D+ +RG P + + + + G
Sbjct: 359 KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAG 418
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ + L S +LD G+ + + L+ +C + +A L ++E D+ TY+
Sbjct: 419 RMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L+D L K G +AVR+ D M E+ + S ++ ++ A+ M K
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKK 538
Query: 424 GHKPDEATYKQVISGF 439
G + + TY +I GF
Sbjct: 539 GRRANIVTYNVLIKGF 554
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 203/470 (43%), Gaps = 49/470 (10%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMM-RVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
D +L Y+ + + L V++ M V+G P + + N LL+A ++ A +
Sbjct: 78 DVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFK 137
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKG 126
VSPN T++++ +++C+ G+FE GLL +G+ + Y +I +K G
Sbjct: 138 YFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSG 197
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A + +EM R + P Y+ I+DG +R + + + L+ E+ + P +
Sbjct: 198 DLGFALEVFDEM-RERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPS--V 254
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I L G+ I++R + + T ++ LS+ G + A ++Y
Sbjct: 255 VSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEE 314
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEV---------CGL---------LRDVVERGYI 287
+ RG+ A +N LCK EE C L L+ + E G +
Sbjct: 315 MVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKV 374
Query: 288 PCAMEL------------SRFVASQCGKGKWKEVEELLSAVLDK--GLLLDSFCCSSLME 333
AM L V C G ++L + G+ +D F SSL+
Sbjct: 375 DDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLIN 434
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----EL 389
C ++D+A + + K + +VL+DG K +++ AV++F M L
Sbjct: 435 ALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSL 494
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV S+ I+++ L + R+A +EML+ G KPD TY +I G
Sbjct: 495 TVV---SYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGL 541
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 197/457 (43%), Gaps = 61/457 (13%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPNKFTWSLVA 89
LEV+ MR G P V N ++D +++ + A ++ ++R+ V P+ +++++
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261
Query: 90 QILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
LC+ G+F L + D YS++++ L S+ GD G A EM
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGL-----SEAGDLGGARKVYEEMV 316
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
GR + P T +++L+G + E + M + L ++ S N + ++ L + G
Sbjct: 317 -GRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL--RNVRSYNIF-LKGLFENG 372
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER--GITVRDSD 257
K A M++ D +E T G ++ L G V A+Q+ R G+ V +
Sbjct: 373 KVDDAMMLW----DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFA 428
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERG----YIPCAMELSRFVASQ------------C 301
Y + +N LCKE + +E G++ + +RG C + + FV
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMS 488
Query: 302 GKG-------------------KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
GKG +++E + ++ +L+KG D S+L+ + +D
Sbjct: 489 GKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMD 548
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVS 402
A+ L + D+ Y++++ L G++E+A++++ +++ K V+ + ++
Sbjct: 549 AALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIME 608
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A K +L+ +PD +Y + G
Sbjct: 609 GFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGL 645
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 174/422 (41%), Gaps = 23/422 (5%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F +GLE++ M+ + +AL+ L ++ A +Y MV GV P+ T
Sbjct: 268 GRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTC 327
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ + LC++G E L + + + YN+ + + G A + +
Sbjct: 328 NAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEA 387
Query: 142 RNLTPGFSTYSSILDG--ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ T G + +G R + E ++ G M + +I L G
Sbjct: 388 DSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEF-------AYSSLINALCKEG 440
Query: 200 KTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ A E++ KR C + C ++ K ++ A++++ +S +G ++
Sbjct: 441 RLDEADGVVELMNKRGC----KFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTV 496
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N L + + E + +++E+G+ P + S + L
Sbjct: 497 VSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
LD G D + ++ CS+ +++ A+ L+ + + K +++ T++ +++G +K G
Sbjct: 557 FLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQ-KKCVNLVTHNTIMEGFYKVGN 615
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
E A +I+ ++ E ++ S+ I + LC + A+ D+ L G P T+
Sbjct: 616 CEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNI 675
Query: 435 VI 436
++
Sbjct: 676 LV 677
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 187/427 (43%), Gaps = 23/427 (5%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + + ++ ++ G P+++ L++ + Q+ A L +++ G PN T+
Sbjct: 69 GHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTF 128
Query: 86 SLVAQILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + C +G + LL G ++ Y +I+ SK G AA L EM
Sbjct: 129 NTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM-E 187
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDM 198
++ P YS+++DG + + + + E+ +L L Y +I +
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL----LDAVTYNSLIDGCCSV 243
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ + + E ++ D T ++ AL KEGR+ EA + ++S+RG Y
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
A + C E L +V+RG P + + + C E L + +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK--IEKLKGSL---DVATYDVLLDGLFKD 373
K L+ +SL++ C++ +I H+K ++++ GS DV TY++L+D L K+
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRIS-----HVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418
Query: 374 GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
GR+ EA+ + M + V + ++ ++ C + A + M+K G +PD Y
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478
Query: 433 KQVISGF 439
+I+G+
Sbjct: 479 NVLINGY 485
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 178/410 (43%), Gaps = 10/410 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
RM+RV+ P S + LL A+ R A L+ + G+SP+ T++++
Sbjct: 45 RMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQ 103
Query: 96 GK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
F ++ +L SG + V +N +I+ + G A D + L F T
Sbjct: 104 SHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQF-T 162
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y ++++G + + + + ++ M + + P L +I L G A + +
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPN--LVMYSALIDGLCKDGFVSDALGLCSQ 220
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ I L T ++ GR +E Q+ + + D + ++ LCKE +
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGR 280
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E G+L + +RG P + + + C + E EL + ++ +GL D +
Sbjct: 281 ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNV 340
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-EL 389
L++ YC + +D+A+ L ++ +A+Y+ L+DGL GR+ ++ D M
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I++ LC + +A+ M+K G KP+ TY ++ G+
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 204/506 (40%), Gaps = 90/506 (17%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++Q E Q + + S ++D G D L + + G + N+L+D
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------ 112
+ + L MVR+ V P+ +T++++ LC+ G+ G+L + S
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL--AMMSKRGEKPD 299
Query: 113 -VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
V YN +++ Y + + A + N M R L P Y+ ++DG Y KT++ D +
Sbjct: 300 IVTYNALMEGYCSRENVHEARELFNRMVK-RGLEPDVLNYNVLIDG---YCKTKMVDEAM 355
Query: 172 GLMVE---KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
L E K L+P ++ + +I L + G+ + + T ++
Sbjct: 356 VLFKELCNKNLVPT--IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413
Query: 229 ALSKEGRVKEAIQIYHLISERGIT--------------VRDS------------------ 256
AL KEGR+ EA+ + ++ ++G+ +R++
Sbjct: 414 ALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEP 473
Query: 257 ---DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+Y +N CK +E L +++ + IP + + C G+ V+ELL
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELL 533
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI---------------------E 352
+ D G D + L++ +C + DKAI+L +I E
Sbjct: 534 DEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGE 593
Query: 353 KLKGSLD-------------VATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFV 398
KLK + D V TY +L++ L KDG EA+ + M++ + + +F
Sbjct: 594 KLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFE 653
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMG 424
I++ L E KA K +EM+ G
Sbjct: 654 IIIGVLLQRNETDKAEKLREEMIARG 679
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/432 (19%), Positives = 185/432 (42%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +++ + G+ L+ + + G++ L++ L + +I+ A L M
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDF 128
+ V PN +S + LC+ G LGL + GI +V YN +ID G +
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
L +M N+ P T++ ++D + + + ++ +M ++ P +
Sbjct: 247 QEVTQLLTKMVR-ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD--IVTY 303
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +++ + A +F R +E ++ K V EA+ ++ +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + + Y + ++ LC + V LL ++ P + + + + C +G+ E
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L ++ KG+ + +++M+ YC ++ A + ++ K D+ Y+VL++
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K ++EA+ +F M+ ++ +S+ ++ LC+L + + DEM G P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 428 DEATYKQVISGF 439
D TY ++ F
Sbjct: 544 DVITYNILLDAF 555
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 19/282 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G ++ L V MM G P + NA++D +N + +A ++ MV+
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G+ P+ ++++ C++ + + L + +++ YN +ID G
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM--VEKKLLPKHFLSGN 188
+ L+EMC+ +P TY+ +LD + KT+ D+ + L + + + P + N
Sbjct: 529 VQELLDEMCDSGQ-SPDVITYNILLDA---FCKTQPFDKAISLFRQIVEGIWPDFYT--N 582
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L K AE K T ++ AL K+G EA+ L+S+
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML---LLSK 639
Query: 249 RGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYI 287
R D F + VL + ++ ++ L +++ RG +
Sbjct: 640 MEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 180/405 (44%), Gaps = 14/405 (3%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G P V CN L+ + + ++ A + M G P+ T++ + LC +GK
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254
Query: 98 FEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+L + S V +N ++D + K G A + L EMC N+ P TY+ ++
Sbjct: 255 VVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR-ENILPDVITYTILV 313
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK----RA 211
+G R + +V+ ++ +V + +P + ++ L G+ A + K R
Sbjct: 314 NGLCRVGQVQVAFYLLEEIVRQGYIPD--VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
C + + ++ + G V +A +I + + Y + L K+
Sbjct: 372 CRTGVVMYSS----LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSI 427
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ L+ D+V RGY+P + + + C + +E +L + +G + S+
Sbjct: 428 SKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSV 487
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ C ++D A +L +++ + + + +V Y L+DGL K RM++A + D M+ V
Sbjct: 488 VFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGV 547
Query: 392 -VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ ++ ++ + H + +AM +DEM+ G PD +T K +
Sbjct: 548 ALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 175/429 (40%), Gaps = 28/429 (6%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G M LE R + + P V N L+ L++ A L+ M V P T+
Sbjct: 76 GQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTY 135
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS-------VMYNLVIDFYSKKGDFGAAFDRLNEM 138
+ V LC+SG E LL+ I V YN +I+ + + R+ E
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA-------SRIREA 188
Query: 139 CNGR------NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
C R + P T + ++ G + E + I+ M +P + +I
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNS--II 246
Query: 193 QKLSDMGKTY-AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
L GK AAE++ +C + T +L K G + A+++ + I
Sbjct: 247 HALCVAGKVVEAAEILKTMSCSPDLV----TFNTLLDGFCKAGMLPRALEVLEEMCRENI 302
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y VN LC+ Q + LL ++V +GYIP + + V C G+ +E +
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+ + +G SSL+ YC + KA + ++ + + TY+++L GL
Sbjct: 363 LVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLI 422
Query: 372 KDGRMEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
KDG + +AV I D + V ++ ++ LC +R+A DEM G P++
Sbjct: 423 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV 482
Query: 431 TYKQVISGF 439
T V+ G
Sbjct: 483 TLGSVVFGL 491
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 172/411 (41%), Gaps = 22/411 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK---- 97
G+ V + N LLD L + +Y ++ G SPN T+ ++ + C++G+
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 98 FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E + L + + V ++N++I K G+ A M + R + P TY++++
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR-VKPEIVTYNTVIS 140
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + E + ++ M+ K + + +I + A ++ I
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
TC ++ + K+G V+EA++I + G Y + ++ LC + E
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260
Query: 277 LLRDVVERGYIPCAMELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+L+ + C+ +L F + C G E+L + + +L D + L+
Sbjct: 261 ILKT------MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C Q+ A L +I + DV Y L+DGL K G +EEA ++ +KE+ V
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL---VKEMSVRG 371
Query: 394 SSSFVIVVSRL----CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ V++ S L C + KA + EM+ + P TY V+ G +
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLI 422
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 28/340 (8%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +LD + G+ LEV M +P V L++ L R ++++A L +
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSKK 125
VR G P+ ++ + LC+SG+ E L+ +G+ VMY+ ++ Y +
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGV---VMYSSLVSGYCRA 389
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G+ A + L EM + N+ P TY+ +L G + + ++ +V + +P +
Sbjct: 390 GNVHKAREILAEMVS-INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD--V 446
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL-------QDDTCGCMLKALSKEGRVKE 238
+ +I L + + ACD E+ D T G ++ L + GRV +
Sbjct: 447 VTYNTLIDGLCKANRV-------REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDD 499
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + +S + Y + ++ LCK + ++ C +L + +G + +
Sbjct: 500 AWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIV 559
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
S G+ E + ++ +G L D +L E SN
Sbjct: 560 SMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 599
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 87/214 (40%), Gaps = 4/214 (1%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + R AIQ + E+ D Y +++L K + +D++ G P
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSP 60
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + C G+ E L A+ + + D + + L+ + D+A+ L
Sbjct: 61 NLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF 120
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV---IVVSRLC 405
+E + ++ TY+ ++ GL K G +E+A + + M S+ V +++
Sbjct: 121 ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+R+A ++M G PD T ++SG
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGI 214
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 172/404 (42%), Gaps = 9/404 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N ++D L + + A + M+ GV P+ T++ + LC++ +
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 102 LGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
G+L I V YN +I Y G++ RL EM R L P TYS +LD
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM-YARGLDPDVVTYSLLLD 382
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ K + +I M+ K + P + G ++ + G + I
Sbjct: 383 YLCKNGKCTEARKIFYCMIRKGIKPNVTIYG--ILLHGYAARGAIADLTDLLDLMVANGI 440
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ +L A +K+ + EA+ I+ +S+ G++ Y ++ LCK + ++
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++ G P ++ + V C +W++ EEL + D+G+ + +++M C
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
+ Q+ A L +E++ +V +Y+ L+ G GR +EA ++ D M + +
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ ++ C + A EML+ G P TY ++ G
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGL 664
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 184/460 (40%), Gaps = 52/460 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYGAMVR---DGVSPNKF 83
D L+++ + + +V A N LL+ + R + LA L+ M R + V P+
Sbjct: 32 DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLC 91
Query: 84 TWSLVAQILCRSGKFE------------------VVLGLLDSGIYSSVMYNLVIDFYSKK 125
T+S++ CR G+ E VV+ L +G+ + + +D ++
Sbjct: 92 TYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151
Query: 126 -GDFGAAFD------RLNEMCN------------------GRNLTPGFSTYSSILDGARR 160
+FG + L +CN G N TP TY++I+DG +
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ + ++ ++ M++K + K + +I L AE + + D+ ++
Sbjct: 212 AQAVDRAEGVLQHMIDKGV--KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ L K V A + + ++G+ Y ++ LCK + G+L+
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++++ P + + G+WKEV L + +GL D S L++Y C N +
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVI 399
+A + + + +V Y +LL G G + + + D M + ++ F I
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+ + +AM M + G PD TY +I
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 184/445 (41%), Gaps = 19/445 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D SL+LD G + +++ M G P V+ LL + I
Sbjct: 369 GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADL 428
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGK-------FEVVLGLLDSGIYSSVM-YNLV 118
+ L MV +G+SPN + +++V LC K + + G+ V+ Y ++
Sbjct: 429 TDLLDLMVANGISPNNYIFNIV---LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGIL 485
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID K G A + N+M N +TP ++S++ G ++ E ++ + M ++
Sbjct: 486 IDALCKLGRVDDAVLKFNQMIND-GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRV 236
+ P + ++ L + G+ A+ + E++ ++ + ++ GR
Sbjct: 545 VRPNVVFF--NTIMCNLCNEGQVMVAQRLIDSM--ERVGVRPNVISYNTLIGGHCLAGRT 600
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA Q+ ++ G+ Y + CK + + L R+++ +G P A+ S
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ ++ E +EL ++ G D + + ++ C +D+A + +
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMK 415
++ T+ +++D LFK GR ++A+ +F + +V + ++ I++ + L +
Sbjct: 721 RPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDN 780
Query: 416 NHDEMLKMGHKPDEATYKQVISGFM 440
M K G PD +I +
Sbjct: 781 LFLAMEKSGCTPDSVMLNAIIRSLL 805
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 176/412 (42%), Gaps = 12/412 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++VL Y+ K + + + ++ M +G P V L+DAL + + A + M+
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFG 129
DGV+PN ++ + LC ++ E+ + D G+ +V+ +N ++ +G
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A RL + + P +Y++++ G +T+ + +++ +MV L P L D
Sbjct: 567 VA-QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD--LISYD 623
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ G+ A +F+ + + T +L+ L R EA ++Y + +
Sbjct: 624 TLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS 683
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y +N LCK + +E + + + + P + + + G+ K+
Sbjct: 684 GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDA 743
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +++ GL+ + +M+ +D+ L + +EK + D + ++
Sbjct: 744 MDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
L G E +R Y+ ++ ++ S S L L R+ KNH + L
Sbjct: 804 LLGRG---EIMRAGAYLSKIDEMNFSLEASTTSLLISLFS-REEYKNHAKSL 851
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 43/400 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V +L+ + E A +Y M G+SPN +T++ + LCR+
Sbjct: 292 GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEA 351
Query: 102 LGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L + S V YN++I+ + + G+ AF L+EM G+ P TY ++
Sbjct: 352 IRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV-GKGFVPDTYTYRPLIS 410
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G L +G+ A+ +
Sbjct: 411 G-------------------------------------LCSVGRVSEAKEFVDDLHKDHH 433
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+L + ++ KEGR K+A+ ++ ERG+ + Y ++ +EH + G
Sbjct: 434 KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFG 493
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL+++ G P A+ + + G KE L ++D+G L + ++L+ C
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
+DKA L + + + TY LD L + G ME+AV++ M + + ++ S
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVS 613
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ I++ C L ++ +A K M PD TY +I
Sbjct: 614 YNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTII 653
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 174/451 (38%), Gaps = 49/451 (10%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
K L M L R+M+ +P V +ALL+ L R L+ +V V P+ +
Sbjct: 74 KVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYI 133
Query: 85 WSLVAQILCRSGKF----EVVLGL-LDSGIYSSVMYNL---------------------- 117
+S V + LC F E++ + + S V+YN+
Sbjct: 134 YSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLM 193
Query: 118 -------VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVS-- 167
V+ +Y K + F + E + L TYS ++D RR E
Sbjct: 194 QKGLEANVVTYYGKFNEAELLFKEMGE----KGLCANHITYSILIDSFCRRGEMDNAIGF 249
Query: 168 -DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
D++ +E + P + L I +G AA+ F D+ + T +
Sbjct: 250 LDKMTKASIEFTVYPYNSL------INGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSL 303
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ EG +A ++Y+ ++ +GI+ + A ++ LC+ + E L ++ ER
Sbjct: 304 ISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKI 363
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + + + C G E LL ++ KG + D++ L+ CS ++ +A
Sbjct: 364 MPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKE 423
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
+ K L+ Y L+ G K+GR ++AV M E V + I++
Sbjct: 424 FVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTA 483
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ R EM G +PD Y +I
Sbjct: 484 REHDTRALFGLLKEMHNHGLRPDAVIYTNMI 514
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 9/311 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GFVP L+ L + A + +D N +S + C+ G+F+
Sbjct: 397 GFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDA 456
Query: 102 LG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ +++ G+ V Y ++ID +++ D A F L EM N L P Y++++D
Sbjct: 457 VSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHN-HGLRPDAVIYTNMID 515
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + + +MV++ LP + +I L G AE++ K +
Sbjct: 516 RHSKAGNLKEAFGLWDIMVDEGCLPN--VVTYTALINGLCKAGLMDKAELLSKETLVSDV 573
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T GC L L++ G +++A+Q++H + +G Y + C+ + EE
Sbjct: 574 TPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATK 632
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL + + +P + S + QC + +E +L +LDKGL D+ S L+ C
Sbjct: 633 LLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCC 692
Query: 337 SNRQIDKAIAL 347
+++KA L
Sbjct: 693 IAGELEKAFEL 703
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 1/207 (0%)
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+ EA ++ + E+G+ Y ++ C+ + + G L + +
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C G + ++DKGL +SL+ YC+ + KA ++ ++
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
S + T+ ++ GL + M EA+R+F MKE K++ S ++ +++ C + +
Sbjct: 326 KGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISE 385
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A DEM+ G PD TY+ +ISG
Sbjct: 386 AFHLLDEMVGKGFVPDTYTYRPLISGL 412
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 55/302 (18%)
Query: 143 NLTPGFSTYSSILDGARRYEKTE----VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
NL P T S++L+G R+ + + D IV V+ + + S + +L D
Sbjct: 91 NLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDI---YIYSAVVRSLCELKDF 147
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
K A EMI ++ +L ++ L K R+ EA++I + + ++G+ Y
Sbjct: 148 NK--AKEMIHWMEFNQ-CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
Y GK+ E E L + +
Sbjct: 205 Y--------------------------------------------GKFNEAELLFKEMGE 220
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
KGL + S L++ +C ++D AI K+ K V Y+ L++G K G
Sbjct: 221 KGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASA 280
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A FD M + + + ++ ++S C+ E KA K ++EM G P+ T+ +IS
Sbjct: 281 AKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIIS 340
Query: 438 GF 439
G
Sbjct: 341 GL 342
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 178/416 (42%), Gaps = 17/416 (4%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V + M GFVP N L+D + I A + M+ G+SPN T + + Q C
Sbjct: 348 VLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFC 407
Query: 94 RSGKFEVVLGLLDSGIYSSVMYN-----LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+S + +L+ I + N +VI++ K F A + EM RNL P
Sbjct: 408 KSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML-LRNLRPND 466
Query: 149 STYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
++++ G ++ E E+ R++G K +P + ++ +I L G
Sbjct: 467 GLLTTLVSGLCKAGKQGEAVELWCRLLG----KGFVPN--IVTSNALIHGLCKAGNMQET 520
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + + + T ++ KEG+VKE ++ + ++GI + ++
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + +E L + + GY+P + C K +E E LL+ ++ K L L+
Sbjct: 581 LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN 640
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S +SL+ YC N ++ A L ++ L ATY L+ GL G +++A + D
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLD 700
Query: 385 YM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M KE + + + ++ L ++ K EM P++ TY +I GF
Sbjct: 701 EMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGF 756
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 188/428 (43%), Gaps = 18/428 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ H G F +V+ ++ G P++ C LL +L + NE++ + +Y + G+ P+
Sbjct: 197 FKHLG-FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPD 255
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+S + C+ + + +GL G+ +V+ YN +I K G A+ R
Sbjct: 256 VHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAY-RFK 314
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E ++P TYS ++G + EK + ++ ++ M E +P N+ V L
Sbjct: 315 EKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVP------NEVVYNTLI 368
Query: 197 D----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D MG A I + I T +++ K ++ +A + + RG+
Sbjct: 369 DGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLP 428
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ + +N LC + + +R+++ R P L+ V+ C GK E EL
Sbjct: 429 INQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL 488
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+L KG + + ++L+ C + + + L + + D TY+ L+ G K
Sbjct: 489 WCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCK 548
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+G+++E + + M + + +F +++ LC+ ++ +A + E K G+ P+ T
Sbjct: 549 EGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYT 608
Query: 432 YKQVISGF 439
Y +I G+
Sbjct: 609 YGVMIDGY 616
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 188/416 (45%), Gaps = 9/416 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + ++ M G P V N ++ L + + A MV++ VSP+ T+S+
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFI 333
Query: 90 QILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L + K + V+ + + G + + V+YN +ID Y K G+ A ++M + + +
Sbjct: 334 NGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLS-KGI 392
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P T +S++ G + ++ ++ ++ M+ + L VI L + A
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQ--GSFSMVINWLCLKFRFVTA 450
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + D ++ L K G+ EA++++ + +G A ++
Sbjct: 451 LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK +E LLRD++ERG + + + ++ C +GK KE EL ++ KG+ D
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + L+ C+ +ID+A L + +K +V TY V++DG K ++EE + +
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630
Query: 385 YMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ K+ ++S + ++ C + A + D+M G ATY ++ G
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGL 686
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 8/254 (3%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G +G E+ M G P + N LL L ++I AS L+ ++G PN +T
Sbjct: 549 EGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYT 608
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ ++ C++ K E LL+ + +SV+YN +I Y G+ AAF RL +
Sbjct: 609 YGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAF-RLRDDM 667
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
R + +TYSS++ G + + ++ M ++ LLP + +I S +G
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPN--VVCYTTIIGGYSKLG 725
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ ++ + I T M+ K G+ KEA ++ + ++E+GI Y
Sbjct: 726 QMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYN 785
Query: 260 AFVNVLCKEHQPEE 273
AF N LCKE + EE
Sbjct: 786 AFTNGLCKEGKVEE 799
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 165/386 (42%), Gaps = 10/386 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S+V++ K F+ L R M + P L+ L + + A
Sbjct: 426 GLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEA 485
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG-IYSSVMYNLVIDF 121
L+ ++ G PN T + + LC++G + L LL + G ++ + YN +I
Sbjct: 486 VELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISG 545
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K+G F+ EM + + P T++ +L G +K + + R+ + +P
Sbjct: 546 CCKEGKVKEGFELKEEMVK-KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ G +I K E + +K+EL +++A G + A +
Sbjct: 605 NVYTYG--VMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFR 662
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + RG+ + + Y + ++ LC ++ LL ++ + G +P + + +
Sbjct: 663 LRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYS 722
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DV 360
G+ +V +L + + + F + +++ +C + +A L ++ + KG L D
Sbjct: 723 KLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTE-KGILPDA 781
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYM 386
TY+ +GL K+G++EEA ++ D M
Sbjct: 782 VTYNAFTNGLCKEGKVEEAFKVCDEM 807
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 8/345 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +E++ + GFVP + NAL+ L + ++ L M+ G+ ++ T++ +
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLI 543
Query: 90 QILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ GK FE+ ++ GI + +NL++ A RL C
Sbjct: 544 SGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA-SRLWHECKKNGY 602
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY ++DG + K E + ++ +V KKL + + +I+ G AA
Sbjct: 603 VPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVY--NSLIRAYCINGNMNAA 660
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + L T ++ L G V +A + + + G+ Y +
Sbjct: 661 FRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG 720
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
K Q +V +L+++ P + + C GK KE +LL+ + +KG+L D
Sbjct: 721 YSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPD 780
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ ++ C ++++A + ++ LD TY L+DG
Sbjct: 781 AVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 29/265 (10%)
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
H L GND + A ++ R D K+ A + E R E QI
Sbjct: 128 HLLVGNDLL----------SPARLLLIRLIDGKVP--------AFYARNFESRHFEIAQI 169
Query: 243 ---YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV----VERGYIPCAMELSR 295
++L+ E I V+ +D V +H G DV ++G P +
Sbjct: 170 MADFNLVFEPVIGVKIADLLVHVYSTQFKHLG---FGFAADVFSLLAKKGLFPSLKTCTF 226
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
++S + K+ E+ + G++ D S+++ +C + D AI L K+EKL
Sbjct: 227 LLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLG 286
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
+ +V TY+ ++ GL K GR++EA R + M + KV S ++ + ++ L L+++ +A
Sbjct: 287 VAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEAN 346
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
EM ++G P+E Y +I G+
Sbjct: 347 CVLKEMSELGFVPNEVVYNTLIDGY 371
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 185/450 (41%), Gaps = 44/450 (9%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L +Y+ M +G N L+++ N + A + G +++ G P+ T++ + +
Sbjct: 74 LSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRG 133
Query: 92 LCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC GK L L D G V+ Y +I+ K G+ A L M RN P
Sbjct: 134 LCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM-EQRNCRP 192
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
YS+I+D + + + + M+ K + P +F + +I L +G A
Sbjct: 193 TVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSS--LIHGLCILGHWKEAIR 250
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEA---------------IQIYH------- 244
+F KI T ++ AL KEG V +A + Y+
Sbjct: 251 LFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHC 310
Query: 245 LISERGITVRDSD-------------YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
L SE G TV D Y +N CK ++ GL ++ ++G IP +
Sbjct: 311 LRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTV 370
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + C G+ ++ L ++ G + D L +Y C N ++ +A+ L I
Sbjct: 371 TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 430
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKEL 410
E D+ Y +++DG+ + G +E A +F + + ++ I+++ LC L
Sbjct: 431 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 490
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+A K EM + G P+ TY + GF+
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFL 520
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 153/350 (43%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++D+L + ++ A L+ M+ G+SPN FT+S + LC G ++ + L
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251
Query: 105 LDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ I+ +M +N ++D K+G A ++ M +L P TY+S++DG
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS-DLKPDVVTYNSLMDGHC 310
Query: 160 RYEKTEVSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + MV K +P + N Y K+ M K A +F+ + +
Sbjct: 311 LRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYC--KIQIMDK---AMGLFEEMSQQGL 365
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L GR+++AI ++H + G Y + LCK H+ E
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL+ + P S + C G+ + +L S + KGL D + ++ C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +A L ++++ S + TY+++ G ++ A+++F M
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 3/216 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L ++++ + +Y + GI +N C ++ +L D+++ G
Sbjct: 60 LLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLG 119
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P + + C +GK E +L + +G D +L+ C AI
Sbjct: 120 YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAI 179
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSR 403
+E+ V Y ++D L KD ++ EA+ +F M K +S ++F ++
Sbjct: 180 RFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLA-KGISPNNFTYSSLIHG 238
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC L ++A++ M+ PD+ T+ ++
Sbjct: 239 LCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ V+ M G VP+V + L++ + + A L+ M + G+ P+ T++ +
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378
Query: 92 LCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC G+ + L I V Y ++ D+ K A L ++ G NL P
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLL-KVIEGTNLDP 437
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
YS ++DG R + E + + + K L P + +I L G A
Sbjct: 438 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD--VRTYTIMINGLCQQGLLAEASK 495
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F + T + + + AIQ++ + RG ++ S V +L
Sbjct: 496 LFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLS 555
Query: 267 KEHQPEEVCGLLRDVVE 283
+ + V +L + V+
Sbjct: 556 DDGLDQSVKQILCEFVQ 572
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 188/460 (40%), Gaps = 69/460 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+LV+ +G +G+E+ R + +G P + + NA+L L L MVR
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G PN T++ + LCR+G FE V + L
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQV------------------------------HEAL 271
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
++M TP Y++I+DG + EV++ I+ M L P + + V++ L
Sbjct: 272 SQMPE-HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN--VVCYNTVLKGL 328
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ AE + E L D T ++ + G V I++ + E G
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N CKE +E LL+++ G P + + + C +W + +EL+S
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ +G L + ++L+ + C +++AI L ++ S D+ +Y ++DGL K G+
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508
Query: 376 MEEA-----------------------------------VRIFDYMKELKVVSSSS-FVI 399
EEA +++FD +++ V S ++ +
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+S LC E +A+ M+ G P+E+TY +I G
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 608
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +++ + C L C ++ A+ ++G V E +++ + G Y A +
Sbjct: 165 ALQVLHAKGC----TLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
LC + ++V L+ ++V G P + +A C G +++V E LS + + G
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +++++ C + + A + ++ +V Y+ +L GL R EEA +
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340
Query: 383 FDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M +E + +F I+V C + + ++ ++ML+ G PD TY VI+GF
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 187/419 (44%), Gaps = 12/419 (2%)
Query: 30 DGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ LE+ MM R G P V + +++ +++ + A Y M+ +SP+ T+S
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235
Query: 87 LVAQILCRS----GKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ LC+ EV+ ++ +G+ + M YN ++ Y A L +M
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM-RS 294
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ P TY+S++D + ++ + +I M ++ L P ++ ++Q + G
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD--IATYCTLLQGYATKGAL 352
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+ I ++ A +K+ +V EA+ ++ + + G+ Y A
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ +LCK ++ +++ G P + + + S C KW + EEL+ +LD+G+
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L++ +S++ +C ++ ++ L + ++ +V TY L+DG G+M+EA +
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + + ++ +++ C + + A+ EM+ G P+ TY ++ G
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 165/414 (39%), Gaps = 78/414 (18%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V ++++ AL + + A + MV++GV PN T++ + C S + + +G
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGF 288
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L G+ V+ YN ++D+ K G A + M R L P +TY ++L G
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK-RGLEPDIATYCTLLQGYA 347
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ LMV + P H + + +I + K A ++F + +
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVF--NILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T G ++ L K G V +A+ + + + G+T Y + ++ LC + ++ L+
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 280 DVVERGYI-----------------------------------PCAMELSRFVASQCGKG 304
++++RG P + S + C G
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----------------- 347
K E +LLS++ G+ D ++L+ YC ++D A+AL
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 348 ------------------HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++ I K L+++TY+++L GL K+ +EA+R+F
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 13/320 (4%)
Query: 129 GAAFDRLNEMC--NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
AA R N M +TP TY ++ R + ++ +G +V KK ++
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVV-KKGFRVEAIT 124
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +D + A +++ +R + +C +LK L E R +EA+++ H++
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184
Query: 247 SER--GITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
++ G + D Y +N KE ++ ++++R P + S +A+ C
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+ E+L+ ++ G++ + +S++ YCS+ Q +AI K+ DV TY
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ L+D L K+GR EA +IFD M E + + + + + L E+ + D
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL---DL 361
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G PD + +I +
Sbjct: 362 MVRNGIHPDHHVFNILICAY 381
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/392 (19%), Positives = 162/392 (41%), Gaps = 40/392 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + V+ MR +G P V A++ L + + A + M+ +G++PN ++ +
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Query: 90 QILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC K+ E++L +LD GI +++ +N +I + K+G + ++L ++ +
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES-EKLFDLMVRIGV 507
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP----------------------- 181
P TYS+++DG K + + +++ M + P
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567
Query: 182 --KHFLSGN--------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
K +S + ++Q L +T AA+ ++ +L+ T +L L
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K EA++++ + + + + + L K + +E L G +P
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ G+G +E+++L ++ D G +DS + ++ +I +A I
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++ SL+ +T + +D L G+ +E R
Sbjct: 748 DEKHFSLEASTASLFID-LLSGGKYQEYHRFL 778
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 150/367 (40%), Gaps = 35/367 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y+ KG ++ + +M G P N L+ A +Q ++ A ++ M + G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
++PN T+ V ILC+SG + D+ +Y + +ID
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVD------DAMLY----FEQMID----------------- 434
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLS 196
LTP Y+S++ ++K + ++ ++ M+++ + L F + +I
Sbjct: 435 ----EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS---IIHSHC 487
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G+ +E +F ++ T ++ G++ EA ++ + G+
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +N C+ + ++ L +++V G P + + + + +EL +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G L+ + ++ C N D+A+ + + L+ T+++++ L K GR
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667
Query: 377 EEAVRIF 383
+EA +F
Sbjct: 668 DEAKDLF 674
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 175/419 (41%), Gaps = 48/419 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
E + +++ +S GL + L VY M V +PA+ ACN +LD L ++
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDGLVKKGRFDT 176
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVID 120
+YG MV G SPN T+ + CR G F L D I + V+Y ++I
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ A M N + P TY++++DG + + + + M+ LL
Sbjct: 237 GLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLL 295
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P G +I L + +A + C++ K G + EA+
Sbjct: 296 PNVVTFG--ILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ I + I Y + LC + EE GLL+++ ++G++P A+ + +
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-D 359
C +G ++ E+ S + +KG+ + S+L++ YC +++ A+ L+ ++ +KG L D
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM-VIKGLLPD 472
Query: 360 VATYDVLLDGLF-----------------------------------KDGRMEEAVRIF 383
V Y L+DG F KDGR+ +A+++F
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 39/325 (12%)
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N+V+D KKG F + +M R +P TY +++DG R + R+ M+
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMV-ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
EKK+ P + Y I +++ L E R
Sbjct: 221 EKKIFPTVVI----YTI---------------------------------LIRGLCGESR 243
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ EA ++ + G+ Y ++ CK ++ L ++++ G +P +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C + + L + G++ + F + L++ YC + +A++LH +IEK +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
DV TY +L+ GL RMEEA + MK+ + ++ ++ ++ C + KA+
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ +M + G +P+ T+ +I G+
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGY 448
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 178/373 (47%), Gaps = 14/373 (3%)
Query: 77 GVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAA 131
+SPN +++LV + LC+ EV G+ + + Y ++D K+ A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
L+EM +P Y+ ++DG ++ + T V+ ++V M K +P +
Sbjct: 242 VLLLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLTRVT-KLVDNMFLKGCVPNEVTY--NT 297
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L GK A + +R K D T G ++ L K+ R +A+++ + ERG
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ L KE + EE L R + E+G P + S V C +GK E +
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E+L+ ++ G L +++ SSLM+ + ++A+ + +++K S + Y VL+DGL
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML---KMGHK 426
GR++EA+ ++ M + + + ++ ++ LC + + A+K + EML + +
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537
Query: 427 PDEATYKQVISGF 439
PD TY ++ G
Sbjct: 538 PDVVTYNILLDGL 550
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 185/427 (43%), Gaps = 16/427 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMM----RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
VL+ ++GL+ GLE Y + P + N ++ AL + + A ++ M
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM 213
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
P+ +T+ + LC+ + + + LLD S V+YN++ID KKGD
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
++ M + P TY++++ G K + + ++ MV K +P G
Sbjct: 274 TRVTKLVDNMF-LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I L + A + + L ++ L KEG+ +EA+ ++ ++E
Sbjct: 333 --LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y V+ LC+E +P E +L ++ G +P A S + G +E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ + G + FC S L++ C ++ +A+ + K+ + D Y ++
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIK 510
Query: 369 GLFKDGRMEEAVRIFDYM---KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GL G M+ A++++ M +E K ++ I++ LC K++ +A+ + ML G
Sbjct: 511 GLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Query: 425 HKPDEAT 431
PD T
Sbjct: 571 CDPDVIT 577
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E+ + ++ L D + +LM+ C +ID+A+ L +++ S Y+VL+DGL
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 371 FKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K G + ++ D M LK V + ++ ++ LC +L KA+ + M+ P+
Sbjct: 268 CKKGDLTRVTKLVDNM-FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 429 EATYKQVISGFM 440
+ TY +I+G +
Sbjct: 327 DVTYGTLINGLV 338
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
+ L+ L+++ + A L+ M G PN +S++ LCR GK +L+ I
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
S + P TYSS++ G + KT + +
Sbjct: 426 SGCL-------------------------------PNAYTYSSLMKG---FFKTGLCEEA 451
Query: 171 VGLMVEKKLLPKHFLSGNDY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
V + E + K S N + +I L +G+ A M++ + I+ +
Sbjct: 452 VQVWKE---MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 227 LKALSKEGRVKEAIQIYH--LISERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+K L G + A+++YH L E + D Y ++ LC + LL +++
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 284 RGYIPCAMELSRFV------ASQCGKGKWKEVEELLSAVLDK 319
RG P + + F+ ++ C KG+ +EEL+ +L +
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSNSCDKGR-SFLEELVVRLLKR 609
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 186/433 (42%), Gaps = 42/433 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ H G F + + + G P++ +CN L+ +L + NE+ + ++ AM R GV +
Sbjct: 182 FQHLG-FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLID 240
Query: 82 KFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+T++ C+ GK + +GL + G+ +V+ YN +ID K G A
Sbjct: 241 VYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKG 300
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL----------S 186
M + + P TY +++G ++EK + ++ ++ M K P F+
Sbjct: 301 RMVENK-VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRK 359
Query: 187 GN-----------------------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
GN + ++Q + AE + + + + +D C
Sbjct: 360 GNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDAC 419
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL-LRDVV 282
+L L K + A++I + R I V DS V LCK + E L R
Sbjct: 420 SYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLAD 479
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
++G + + C +G +EV + ++++GL+LD ++L+ C + +I+
Sbjct: 480 KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIE 539
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
+A L K+ K D TY+ L+ GL G+M++ R+ K+ VV + ++ +++
Sbjct: 540 EAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALML 599
Query: 402 SRLCHLKELRKAM 414
C+ + A+
Sbjct: 600 EGYCNADRIDNAV 612
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 204/470 (43%), Gaps = 53/470 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ Y G + + ++ M G +P V N L+D L + + A G MV
Sbjct: 245 ATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVE 304
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
+ V+P+ T+ ++ L + KF+ V++ + G + ++N +ID YS+KG+
Sbjct: 305 NKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDD 364
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND- 189
A R+ + + L P T++++L G R + E +++++ + L + LS N+
Sbjct: 365 AL-RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVL------EYLLSNVLSVNED 417
Query: 190 ---YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI-YHL 245
YV+ L K +A I K I++ D ++ L K G+ EAI + + L
Sbjct: 418 ACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRL 477
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
++G+ + A + LC+ EEV + +++VERG + + + + C GK
Sbjct: 478 ADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGK 537
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLM--------------------------------- 332
+E +L ++ +G D++ + LM
Sbjct: 538 IEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYAL 597
Query: 333 --EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
E YC+ +ID A++L K+ K L Y++L+ K G EA ++ D M+
Sbjct: 598 MLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSN 657
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ +C + +A +EM G P+ Y +I G+
Sbjct: 658 IHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGY 707
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 181/442 (40%), Gaps = 12/442 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++D YS KG D L V M + G P N LL R N++
Sbjct: 340 KGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQ 399
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVID 120
A + ++ + +S N+ S V +LC+S KF+ L ++ + + ++ N L++
Sbjct: 400 AEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVC 459
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A D + + + L +T +++L G E + MVE+ L+
Sbjct: 460 GLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLV 519
Query: 181 PKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L G Y +I GK A + ++ + + T ++K L+ +G++ +
Sbjct: 520 ----LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDD 575
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
++ H + G+ Y + C + + L +V + + +A
Sbjct: 576 VGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIA 635
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ G + E +L A+ + F SS++ C N +++A + ++
Sbjct: 636 AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMP 695
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
+V Y L+ G K G+M++ I M + + ++ I++ C + ++A K
Sbjct: 696 NVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLL 755
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+EM+ G PD TY + G+
Sbjct: 756 NEMIANGISPDTVTYTVLQKGY 777
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+MM+ GF P N L+ L + ++ + GV PN +T++L+ + C +
Sbjct: 547 KMMK-QGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNA 605
Query: 96 GKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ + + L + +Y S V+YN++I +SK G+F AF +L + N+ P T
Sbjct: 606 DRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAF-KLRDAMRSSNIHPTIFT 664
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
YSSI+ G + E + I M + L+P F +I +G+ E I +
Sbjct: 665 YSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCY--TALIGGYCKLGQMDQIESILQE 722
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
I+ T M+ K G KEA ++ + + GI+ Y CKE++
Sbjct: 723 MTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENE 782
Query: 271 PEEV 274
EE
Sbjct: 783 LEET 786
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G P + ++S + + + A+ G+L+D + ++ + YC +I
Sbjct: 198 TSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKI 257
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
D+A+ L +K+ + +V TY+ L+DGL K GR+EEA+ M E KV S ++ I+
Sbjct: 258 DEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGIL 317
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+ L ++ +A EM G P+E + +I G+
Sbjct: 318 VNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGY 356
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 126/312 (40%), Gaps = 8/312 (2%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSG-IYSSVMYNLVIDFYSKKGDFG 129
+ G++ N T + + LC G E V +++ G + + YN +I K G
Sbjct: 480 KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIE 539
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF +L E + P TY+ ++ G K + R++ + ++P +
Sbjct: 540 EAF-KLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYA-- 596
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ + + A +F + K+EL ++ A SK G EA ++ +
Sbjct: 597 LMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSS 656
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
I Y + ++ +C EE G+ ++ G +P + + C G+ ++
Sbjct: 657 NIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQI 716
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E +L + + + + +++ YC +A L ++ S D TY VL G
Sbjct: 717 ESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG 776
Query: 370 LFKDGRMEEAVR 381
K+ +EE ++
Sbjct: 777 YCKENELEETLQ 788
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 202/465 (43%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + + G +P+V A N +L L R+ ++ A + AM D +PN
Sbjct: 352 YGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APN 410
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+++++ +LC++G+ E L + DS G++ +++ N++ID K RL+
Sbjct: 411 LTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKA-------QRLD 463
Query: 137 EMC------NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
E C + + TP T+ S++DG R+ K + + M++ P + +
Sbjct: 464 EACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTS-- 521
Query: 191 VIQKLSDMGKTYAAEMIFK----RACDEKIELQDDTCGCMLKA----------------- 229
+I+ G+ I+K R C + L ++ C+ KA
Sbjct: 522 LIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG 581
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G K+ ++++ + E+G+ + Y ++ CK + +
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ +G P + + + E L K + L+ SSL++ +
Sbjct: 642 QLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGF 701
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ + + + T++ LLD L K ++EA+ F MK LK +
Sbjct: 702 GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNE 761
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+V+ LC +++ KA EM K G KP+ TY +ISG
Sbjct: 762 VTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGL 806
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 190/485 (39%), Gaps = 78/485 (16%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ V MR + F PA SA L+ AL +E L M G ++ +
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ R G+ + L LLD +S V+YN+ ID + K G A+ +E+ + L
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHEL-KSQGL 303
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T++S++ + E+ + + + + K +P + + +I +GK A
Sbjct: 304 VPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVY--AYNTMIMGYGSVGKFNEA 361
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS----------------- 247
+ +R + C+L L ++G+V+EA++I +
Sbjct: 362 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDML 421
Query: 248 ------ERGITVRDSDYYA--FVNV---------LCKEHQPEEVCGLLRDVVERGYIPCA 290
E + V+DS A F N+ LCK + +E C + + + P +
Sbjct: 422 CKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDS 481
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY--CSNR--------- 339
+ + GK + L +LD G ++ +SL+ + C +
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541
Query: 340 ------------------------QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+I+K AL +I+ + DV +Y +L+ GL K G
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGF 601
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
++ ++F MKE + + + ++ IV+ C ++ KA + +EM G +P TY
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGS 661
Query: 435 VISGF 439
VI G
Sbjct: 662 VIDGL 666
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 156/378 (41%), Gaps = 45/378 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DG ++Y+ M G P + N +D +++ EI L+ + G++P+ ++S++
Sbjct: 534 DGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILI 593
Query: 90 QILCRSG----KFEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L + G +++ + + G++ + YN+VID + K G A+ L EM + L
Sbjct: 594 HGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEM-KTKGL 652
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY S++DG L+ + + A
Sbjct: 653 QPTVVTYGSVIDG-------------------------------------LAKIDRLDEA 675
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M+F+ A + ++L ++ K GR+ EA I + ++G+T + ++
Sbjct: 676 YMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDA 735
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K + +E +++ P + S V C K+ + + +GL +
Sbjct: 736 LVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPN 795
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++++ + +A L + + G D A Y+ +++GL + +A +F+
Sbjct: 796 TITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFE 855
Query: 385 --YMKELKVVSSSSFVIV 400
+K ++ S + V++
Sbjct: 856 ETRLKGCRIYSKTCVVLL 873
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 153/383 (39%), Gaps = 49/383 (12%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ +DC G G ++ ++ G P V + + L+ L + + L+ M
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFG 129
G+ + +++V C+SGK LL+ G+ +V+ Y VID +K
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLD 673
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A+ L E + + YSS++DG + + + + I+ +++K L P +
Sbjct: 674 EAY-MLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTY----- 727
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
T C+L AL K + EA+ + +
Sbjct: 728 --------------------------------TWNCLLDALVKAEEIDEALVCFQNMKNL 755
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ Y VN LCK + + +++ ++G P + + ++ G E
Sbjct: 756 KCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEA 815
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE--KLKG-SLDVATYDVL 366
++L G + DS C ++++E + +KA+ +I E +LKG + T VL
Sbjct: 816 KDLFERFKSSGGIPDSACYNAMIEGLSN---ANKAMDAYILFEETRLKGCRIYSKTCVVL 872
Query: 367 LDGLFKDGRMEEAVRIFDYMKEL 389
LD L K +E+A + ++E+
Sbjct: 873 LDALHKADCLEQAAIVGAVLREM 895
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 177/437 (40%), Gaps = 38/437 (8%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + V+ + +G + +EV+ M+ G VP + + L+D L +Q ++
Sbjct: 276 GNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTG 335
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L M R+G++P ++S + LCR+GK E+ L
Sbjct: 336 YDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFEL---------------------- 373
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
F RL E + YS IL+G ++ EV + MV +P +
Sbjct: 374 -----FRRLEE----QGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAY-- 422
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I A +F+ D + TC ++ KE + EA H +
Sbjct: 423 NYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKV 482
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ GI Y +N LCK ++ + V G+ D+++RGY+P + S + S K
Sbjct: 483 RQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKL 542
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYD 364
E L +LD+G + F +SL+ C + ++ + + L H+ E L + D Y
Sbjct: 543 PEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGL--TPDRILYT 600
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ K M+ A+ IF M +L + + + + ++ + + A +EM
Sbjct: 601 SLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNK 660
Query: 424 GHKPDEATYKQVISGFM 440
G P TY +I G+
Sbjct: 661 GLTPSVVTYTNLIIGYF 677
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 188/453 (41%), Gaps = 25/453 (5%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++ S G + + ++ + +F D L Y + G + CN LL L +
Sbjct: 130 LVSSLGGSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGV--ELQLCNFLLKCLVER 187
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK------FEVVLGLLDSGI----- 109
N+I A L+ M G SPN +++S++ + FE++ + G+
Sbjct: 188 NQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAA 247
Query: 110 -YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
Y + +Y L S+ +A++ L +C N + +++++ G R + + +
Sbjct: 248 TYGTYLYGL-----SRTRQVASAWNFLQMLCQRGNPCNTY-CFNAVIQGFCREGQVQEAI 301
Query: 169 RIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ M + L+P H S ++ L G + I + +L
Sbjct: 302 EVFDAMKKGGLVPDTHSYS---ILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLL 358
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L + G+V+ A +++ + E+G Y +N C+ E VC L D+V ++
Sbjct: 359 HGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFV 418
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P A + + + C + + +LD G+ + C+ L++ + R ID+A
Sbjct: 419 PDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLF 478
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCH 406
K+ + ++ Y V+++GL K + + IF D +K V + + I++
Sbjct: 479 LHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVK 538
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L +A + +ML G KP+ TY +I+G
Sbjct: 539 ALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGL 571
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y F D ++ +R G +P+V + N++L L ++ ++ A L+ M +D PN
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPN 384
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC +G+ + D +G++ +++ N+++D K A R+
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA-HRIF 443
Query: 137 EMCNGRNLTPGFSTYSSILDGA----------RRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
E + R P TY S++DG R +EK + ++ L+ F+
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMH 503
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
G + D K Y EMI +R + L + C+ KA
Sbjct: 504 G------RKEDGHKIYK-EMI-RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L+K G+ +E I+ +S++G + Y A V+ LCK + ++
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAY 615
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+L ++ + P V + E L KG+ L+ SSL++ +
Sbjct: 616 EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGF 675
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ K + +V T++ L+D L K ++EA+ F MKE+K ++
Sbjct: 676 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+++ LC +++ KA EM K G P+ TY +ISG
Sbjct: 736 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL 780
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 175/448 (39%), Gaps = 39/448 (8%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D V MR F P SA L+ AL + A L M G + ++ +
Sbjct: 159 DAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLV 218
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ L R G+ E L L+D S V+YN+ ID + K G A+ +E+ L
Sbjct: 219 RALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL-KAHGL 277
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL---------SGNDY----- 190
P +Y+S++ + + ++ + G M ++ +P + S +
Sbjct: 278 RPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYK 337
Query: 191 VIQKLSDMG---KTYAAEMIF-----KRACDEKIELQD----------DTCGCMLKALSK 232
++++L + G + I KR DE + L D T ++ L
Sbjct: 338 LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCM 397
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
GRV EA +I + G+ V+ LCK +Q EE + ERG P ++
Sbjct: 398 AGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVT 457
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ KGK + L +LD G + +SL+ + + + + ++ ++
Sbjct: 458 YCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMI 517
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELR 411
+ G D+ + +D +FK G +E+ IF+ MK + S+ I++ L + R
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + G D Y V+ G
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGL 605
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 154/374 (41%), Gaps = 44/374 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL+ + + H G DG ++Y+ M G P ++ N +D +++ E+ ++ M
Sbjct: 495 SLIRNFFMH-GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKS 553
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
G P+ ++S++ L ++G+ + + G + YN V+D K G
Sbjct: 554 FGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDK 613
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A++ L EM +++ P +TY SI+DG
Sbjct: 614 AYEVLEEM-KVKHVHPTVATYGSIVDG--------------------------------- 639
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ K+ + + Y M+F+ A + IEL ++ K GR+ EA I + ++G
Sbjct: 640 -LAKIDRLDEAY---MLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T + + ++ L K + +E + + E P S + C K+ +
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ +GL+ + ++++ I A +L + + G D A+++ L++G+
Sbjct: 756 VFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGM 815
Query: 371 FKDGRMEEAVRIFD 384
R EA ++F+
Sbjct: 816 SNANRPMEAYQVFE 829
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 15/319 (4%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCN-GRNL-TPGFSTYSSILDGARRYEKTEVSDRIVG 172
YN V+ F S D A L EM + G L P + + L +RR E + R++G
Sbjct: 111 YNAVLPFLSH--DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLED---AFRVIG 165
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M K P S +I L++ + A + ++ D E+ +++AL++
Sbjct: 166 AMRHLKFRPP--FSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAR 223
Query: 233 EGRVKEAIQIYHLISERGITVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
EG+++ A+ L+ E + + D Y ++ K + ++ G P
Sbjct: 224 EGQMEPALA---LVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPD 280
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + V C G+ E EEL + + + ++ ++++ Y S + D A L
Sbjct: 281 DVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLE 340
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKE 409
++ + V +++ +L L K +++EA+ +FD MK+ + S++ I++ LC
Sbjct: 341 RLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGR 400
Query: 410 LRKAMKNHDEMLKMGHKPD 428
+ +A K DEM G P+
Sbjct: 401 VNEAYKIRDEMELAGLFPN 419
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 105/282 (37%), Gaps = 33/282 (11%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + A + V+D G EV M+V P V+ +++D L + + +
Sbjct: 587 SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRL 646
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
A L+ G+ N ++Y+ +ID +
Sbjct: 647 DEAYMLFEEAKSKGIELN------------------------------VILYSSLIDGFG 676
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K G A+ L EM + LTP T++S++D + E+ + + M E K P
Sbjct: 677 KVGRIDEAYLILEEMMK-KGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + K A + ++ + + T M+ L+K G + +A ++
Sbjct: 736 YTYS--ILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLF 793
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
G + + A + + ++P E + + RG
Sbjct: 794 ERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 177/440 (40%), Gaps = 46/440 (10%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK------ 97
+P V N LL +L ++ L M + PN +T +++ LC S +
Sbjct: 66 LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125
Query: 98 --------------FEVVLGLLDSGIYSS----------------------VMYNLVIDF 121
V G L +G+ S + Y +I
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G A L +M + P Y++++D + + + MV++ + P
Sbjct: 186 LCKIGHTTNALQLLKKM-EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ ++ ++G+ A +FK+ + T ++ L KEG + EA +
Sbjct: 245 N--VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ +++E G+ Y A ++ C + Q +E L +V +G+ P + + C
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ E + LLS + D+ L D+ S+LM+ +C + A L ++ D
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEM 420
TY +LLDGL K G ++EA R+ M+E K+ + I++ +C+ +L A + +
Sbjct: 423 TYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNL 482
Query: 421 LKMGHKPDEATYKQVISGFM 440
G +P TY +ISG +
Sbjct: 483 FVKGIQPSVVTYTVMISGLL 502
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 184/427 (43%), Gaps = 11/427 (2%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C+S++ M G P LL+ L + +I A L+ + + G +P
Sbjct: 115 CHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAP 174
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ T++ + + LC+ G L LL + G V+ YN VID K A
Sbjct: 175 SLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFF 234
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+EM + + + P TYSSIL G + + + M+ + ++P ++ L
Sbjct: 235 SEMVD-QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF--TILVDGL 291
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G A +F+ + +E T ++ + ++ EA +++ ++ +G
Sbjct: 292 CKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N CK + E LL ++ +R P + S + C G+ + ++L
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ GLL DS S L++ C + +D+A L +++ K + Y++L+ G+ G+
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471
Query: 376 MEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+E A +F ++K ++ S ++ +++S L +A + +M+ G P+ TY
Sbjct: 472 LEAARELFSNLFVKGIQ-PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530
Query: 434 QVISGFM 440
I GF+
Sbjct: 531 VAIQGFL 537
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 153/370 (41%), Gaps = 16/370 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L++ + M G P V A N ++D+L + A + MV G+ PN T+
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCN 140
S + C G+ L I +VM N V +D K+G A R+ EM
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA-RRVFEMMT 308
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSD 197
+ P TYS+++DG + + + ++ +MV K P + + N + + +
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
KT +EM D + T +++ + GR + A +++ + G+
Sbjct: 369 EAKTLLSEMY-----DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ LCK +E LL+ + E P + + C GK + EL S +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRM 376
KG+ + ++ ++A + K+ + G L + TY+V + G ++G
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKM-VVNGCLPNSCTYNVAIQGFLRNGDP 542
Query: 377 EEAVRIFDYM 386
AVR+ + M
Sbjct: 543 SNAVRLIEEM 552
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 134/315 (42%), Gaps = 8/315 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +L + + G + +++ M +P L+D L ++ I A ++ M
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
+GV P+ +T+S + C + + L D G SV +YN++I+ + K
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L+EM + R+LTP TYS+++ G + + +V+ ++ M LLP
Sbjct: 370 AKTLLSEMYD-RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY--SI 426
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L G A + K + KIE +++ + G+++ A +++ + +G
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y ++ L KE E C + R +V G +P + + + G
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546
Query: 311 ELLSAVLDKGLLLDS 325
L+ ++ +G DS
Sbjct: 547 RLIEEMVGRGFSADS 561
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 113/281 (40%), Gaps = 33/281 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + + S ++D Y + + +++ +M GF P+V N L++ + +
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M ++P+ T+S + Q C++G+ +V L
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK------------------- 410
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
EMC+ L P TYS +LDG ++ + + R++ M E K+ P H
Sbjct: 411 -----------EMCS-YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP-HIC 457
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
N +IQ + + GK AA +F + I+ T M+ L KEG EA +++
Sbjct: 458 IYN-ILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRK 516
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ G Y + + P L+ ++V RG+
Sbjct: 517 MVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGF 557
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 201/466 (43%), Gaps = 68/466 (14%)
Query: 2 IQSCEGRDSQSDALSLVLD-------------CYSH------KGLFMDGLE-VYRMMRVY 41
+ S EG+ DA+ L+L+ Y+H +G M LE VY M
Sbjct: 24 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 83
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+ AL R +++R A + M GV+P++ T++ + Q G E
Sbjct: 84 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 143
Query: 102 LG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPGFSTYSSIL 155
L +L+ G ++ V N++I+ Y K G A + E+ +G P TY++ +
Sbjct: 144 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG--FEPDQITYNTFV 201
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + + +++ +MV++ P F
Sbjct: 202 NGLCQNDHVGHALKVMDVMVQEGHDPDVF------------------------------- 230
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ++ L K G+++EA I + + +RG + + + LC ++ EE
Sbjct: 231 ------TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 284
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L R V +G P + + + C G L + + G D ++L++
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
CS ++ KA+ L +E TY+ ++DGL K R+EEA +FD M +L+ +S +
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQGISRN 403
Query: 396 --SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ LC K++ A + ++M+ G +P+ TY +++ +
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 182/431 (42%), Gaps = 42/431 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++++ Y G D L + GF P N ++ L + + + A + M
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V++G P+ FT+++V LC++G+ E G+
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI----------------------------- 251
Query: 134 RLNEMCNGRNLTPGFSTYSSIL----DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
LN+M + R P +T+++++ G R E +++ ++ V + + L
Sbjct: 252 -LNQMVD-RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL---- 305
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
I L +G + A +F+ + + T ++ L G++ +A+ + +
Sbjct: 306 --INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y ++ LCK+ + EE + + +G A+ + + C K +
Sbjct: 364 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 423
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL++ ++ +GL ++ +S++ +YC I KA + + +DV TY L++G
Sbjct: 424 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 483
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K GR + A+++ M+ + + ++ V+ L +R A+ EM ++G PD
Sbjct: 484 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 543
Query: 429 EATYKQVISGF 439
TYK V G
Sbjct: 544 ALTYKIVFRGL 554
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V R MR+ G P A N +L +L+R+N IR A L+ M G P+ T+ +V +
Sbjct: 493 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 552
Query: 91 ILCRSG-----KFEVVLGLLDSG 108
LCR G F+ +L ++D G
Sbjct: 553 GLCRGGGPIKEAFDFMLEMVDKG 575
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 172/418 (41%), Gaps = 73/418 (17%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD- 76
V+ Y G + + + +G P+V + N LL+ L + L ++ +
Sbjct: 176 VIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKF 235
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
G+ PN FT +++ + LC KK D AA L
Sbjct: 236 GIVPNVFTCNILVKALC------------------------------KKNDIDAAIRVLE 265
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM P TY++IL G + R+ G ++++ +P Y I
Sbjct: 266 EM-PAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVP----DPTTYTI---- 316
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
L D C K+GR +A+++ + E + D
Sbjct: 317 ---------------------LMDGYC--------KKGRFMDAVKVMDEMEENRVEPNDV 347
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + CKE + EV LL D++E+ YIP + R + C +GK + EL +
Sbjct: 348 TYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKL 407
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGR 375
L K D+ S+L+ + C ++ +A L + E KGS+ TY+ L+ G+ + G
Sbjct: 408 LKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFE--KGSIPSTLTYNALIAGMCEGGE 465
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ EA R++D M E V ++ ++ +++ C + R+ ++ +EML G P++ATY
Sbjct: 466 LPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
V LCK++ + +L ++ G+IP + + + KG + +LD+G
Sbjct: 247 LVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRG 306
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D + LM+ YC + A+ + ++E+ + + TY V+++ K+ + E +
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVL 366
Query: 381 RIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ D M E K + SS+ V+ LC ++ A + ++LK PD A +I
Sbjct: 367 NLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLI 423
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G++ + F C+ L++ C ID AI + ++ + +V TY +L G G M A
Sbjct: 236 GIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGA 295
Query: 380 VRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
R+F + + V +++ I++ C A+K DEM + +P++ TY +I
Sbjct: 296 RRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEA 355
Query: 439 F 439
+
Sbjct: 356 Y 356
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 80/206 (38%), Gaps = 40/206 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMR---------VYG------------------------ 42
++++D Y KG FMD ++V M YG
Sbjct: 315 TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLE 374
Query: 43 --FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
++P+ + C ++D L + ++ +A L+ +++ +P+ S + LC+ GK
Sbjct: 375 KKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434
Query: 101 VLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L D I S++ YN +I + G+ A + M + P TY+ ++
Sbjct: 435 ARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE-KGCVPNAFTYNMLIK 493
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPK 182
G + R++ M++ LP
Sbjct: 494 GFCKVGNAREGIRVMEEMLDNGCLPN 519
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 105/279 (37%), Gaps = 46/279 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +L Y KG + V+ + G+VP + L+D ++ A + M
Sbjct: 280 TTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEE 339
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ V PN T+ ++ + C+ K VL LLD I SS + VID ++G
Sbjct: 340 NRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEG---- 395
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
K EV+ + +++K P + ++
Sbjct: 396 --------------------------------KVEVACELWKKLLKKNCTPDNAITST-- 421
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L GK + A +F EK + T ++ + + G + EA +++ + E+
Sbjct: 422 LIHWLCKEGKVWEARKLFDEF--EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEK 479
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
G Y + CK E ++ ++++ G +P
Sbjct: 480 GCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLP 518
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 187/427 (43%), Gaps = 23/427 (5%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + + ++ ++ G P+++ L++ + Q+ A L +++ G PN T+
Sbjct: 69 GHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTF 128
Query: 86 SLVAQILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + C +G + LL G ++ Y +I+ SK G AA L EM
Sbjct: 129 NTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM-E 187
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDM 198
++ P YS+++DG + + + + E+ +L L Y +I +
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGIL----LDAVTYNSLIDGCCSV 243
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ + + E ++ D T ++ AL KEGR+ EA + ++S+RG Y
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
A + C E L +V+RG P + + + C E L + +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK--IEKLKGSL---DVATYDVLLDGLFKD 373
K L+ +SL++ C++ +I H+K ++++ GS DV TY++L+D L K+
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRIS-----HVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418
Query: 374 GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
GR+ EA+ + M + V + ++ ++ C + A + M+K G +PD Y
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478
Query: 433 KQVISGF 439
+I+G+
Sbjct: 479 NVLINGY 485
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 178/410 (43%), Gaps = 10/410 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
RM+RV+ P S + LL A+ R A L+ + G+SP+ T++++
Sbjct: 45 RMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQ 103
Query: 96 GK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
F ++ +L SG + V +N +I+ + G A D + L F T
Sbjct: 104 SHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQF-T 162
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y ++++G + + + + ++ M + + P L +I L G A + +
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPN--LVMYSALIDGLCKDGFVSDALGLCSQ 220
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ I L T ++ GR +E Q+ + + D + ++ LCKE +
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGR 280
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E G+L + +RG P + + + C + E EL + ++ +GL D +
Sbjct: 281 ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNV 340
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-EL 389
L++ YC + +D+A+ L ++ +A+Y+ L+DGL GR+ ++ D M
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I++ LC + +A+ M+K G KP+ TY ++ G+
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 204/506 (40%), Gaps = 90/506 (17%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++Q E Q + + S ++D G D L + + G + N+L+D
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------ 112
+ + L MVR+ V P+ +T++++ LC+ G+ G+L + S
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL--AMMSKRGEKPD 299
Query: 113 -VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
V YN +++ Y + + A + N M R L P Y+ ++DG Y KT++ D +
Sbjct: 300 IVTYNALMEGYCSRENVHEARELFNRMVK-RGLEPDVLNYNVLIDG---YCKTKMVDEAM 355
Query: 172 GLMVE---KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
L E K L+P ++ + +I L + G+ + + T ++
Sbjct: 356 VLFKELCNKNLVPT--IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413
Query: 229 ALSKEGRVKEAIQIYHLISERGIT--------------VRDS------------------ 256
AL KEGR+ EA+ + ++ ++G+ +R++
Sbjct: 414 ALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEP 473
Query: 257 ---DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+Y +N CK +E L +++ + IP + + C G+ V+ELL
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELL 533
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI---------------------E 352
+ D G D + L++ +C + DKAI+L +I E
Sbjct: 534 DEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGE 593
Query: 353 KLKGSLD-------------VATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFV 398
KLK + D V TY +L++ L KDG EA+ + M++ + + +F
Sbjct: 594 KLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFE 653
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMG 424
I++ L E KA K +EM+ G
Sbjct: 654 IIIGVLLQRNETDKAEKLREEMIARG 679
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/432 (19%), Positives = 185/432 (42%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +++ + G+ L+ + + G++ L++ L + +I+ A L M
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDF 128
+ V PN +S + LC+ G LGL + GI +V YN +ID G +
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
L +M N+ P T++ ++D + + + ++ +M ++ P +
Sbjct: 247 QEVTQLLTKMVR-ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD--IVTY 303
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +++ + A +F R +E ++ K V EA+ ++ +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + + Y + ++ LC + V LL ++ P + + + + C +G+ E
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L ++ KG+ + +++M+ YC ++ A + ++ K D+ Y+VL++
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K ++EA+ +F M+ ++ +S+ ++ LC+L + + DEM G P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 428 DEATYKQVISGF 439
D TY ++ F
Sbjct: 544 DVITYNILLDAF 555
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 19/282 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G ++ L V MM G P + NA++D +N + +A ++ MV+
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G+ P+ ++++ C++ + + L + +++ YN +ID G
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM--VEKKLLPKHFLSGN 188
+ L+EMC+ +P TY+ +LD + KT+ D+ + L + + + P + N
Sbjct: 529 VQELLDEMCDSGQ-SPDVITYNILLDA---FCKTQPFDKAISLFRQIVEGIWPDFYT--N 582
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L K AE K T ++ AL K+G EA+ L+S+
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML---LLSK 639
Query: 249 RGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYI 287
R D F + VL + ++ ++ L +++ RG +
Sbjct: 640 MEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 188/468 (40%), Gaps = 85/468 (18%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+LVL+ +G L + R + +G P V + NA+L L L MVR
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
PN T++ + LCR+G FE V+ + + G + MY +ID K+G
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKV 315
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + LN M L P Y+++L G A R+E+TE +LL + F
Sbjct: 316 AHEILNRM-PSYGLKPNVVCYNTLLKGLCSAERWEETE------------ELLAEMF--- 359
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
D+ L D T ++ + G V I++ +
Sbjct: 360 -------------------------DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G Y +N CKE +E LL+ + G P + + + C +W
Sbjct: 395 VHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ E+L+S ++ +G L+ ++L+ + C +++AI L ++ S D+ +Y ++
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514
Query: 368 DGLFKDGRMEEA-----------------------------------VRIFDYMKELKVV 392
DGL K G+ +EA +++FD +++ +
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIR 574
Query: 393 SSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S + + V+S LC E +A++ M+ G P+E+TY +I G
Sbjct: 575 SDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 137/315 (43%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M V+G +P V +++ ++ I A L +M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
G PN ++++V + LC + ++ L+ I + + +N +I+F KKG
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KT+ + ++ +MV K + P +
Sbjct: 489 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII-- 544
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ + ALS+EGR+ + IQ++ I
Sbjct: 545 --------------YSS---------------------IASALSREGRINKVIQMFDNIQ 569
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + E L +V G +P + + +G K
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 629
Query: 308 EVEELLSAVLDKGLL 322
E +E+L+ + KG L
Sbjct: 630 EAQEMLTELCSKGAL 644
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L+A + G + A+++ + RG + + +N +C + ++ LLRD+ G
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFG 222
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +W V+EL+ ++ + ++L+ Y C N ++
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE-------------LKVV 392
+ ++ + + D+ Y ++DG+ K+G ++ A I + M LK +
Sbjct: 283 EVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGL 342
Query: 393 SSS-----------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
S+ +F I+V C + + ++ ++ML G PD
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDV 402
Query: 430 ATYKQVISGF 439
TY VI+GF
Sbjct: 403 ITYTTVINGF 412
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y+ V LC + + +L ++ RG P + + C G ++ +L +
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+G LD C+ ++ C +DKA+ L + DV +Y+ +L GL R
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + M + + +F ++S LC + + +M + G PD Y +I
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATII 304
Query: 437 SGF 439
G
Sbjct: 305 DGI 307
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 187/404 (46%), Gaps = 18/404 (4%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFTWSLVAQILCRSGKFEVVLGLL 105
V N LL L+ +N++ A L+ +VR+ + PN+ + V L + G E L LL
Sbjct: 132 VVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL 191
Query: 106 ----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
V Y++VID K + AA + LNEM +N+ P TY+S++DG +
Sbjct: 192 RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM-KQKNIPPNIFTYNSLIDGLCK 250
Query: 161 YEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ E ++ MV + P H S +I L GK A+ + + ++ +E
Sbjct: 251 LGQWEKVKTLLSEMVNLNINPNVHTFS---ILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ G+V A ++++++ ++GI Y +N CK+ + L
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG 367
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ ++G P + S + G+ + +++ +L G D S+L+ Y
Sbjct: 368 EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYG 427
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
+++A+ L K+E+ + +++ Y V+++GL K+ R+ EA IF+ + + ++ ++
Sbjct: 428 LVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYN 487
Query: 399 IVVSRLCH---LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++++ C E++ ++ +M G + TY ++ GF
Sbjct: 488 VMITGFCREGLFDEVKGILR---KMEDNGCPANNITYNVIMQGF 528
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 199 GKTYAAEMIFKRACDEKI-ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
K A ++FK+ EKI E + G ++ LSK G ++ + + I E+G T D
Sbjct: 146 NKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLR-IMEQGNTKPDVR 204
Query: 258 YYAFV-NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y+ V + LCK+ + LL ++ ++ P + + C G+W++V+ LLS +
Sbjct: 205 TYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKA--IALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ + + S L++ C +++ A + H+ IEK D+ TY ++DG G
Sbjct: 265 VNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM-IEK-GVEPDIITYSAIMDGYCLRG 322
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+++ A R+F+ +++ + + S+ I+++ C K L KAM+ E+ + G KPD TY
Sbjct: 323 QVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYS 382
Query: 434 QVISGFM 440
++ G +
Sbjct: 383 TILHGLI 389
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 174/450 (38%), Gaps = 80/450 (17%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ ++R MR+ G + S N + ++ ++ I A + ++ G+ N T++ +
Sbjct: 82 VSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGG 141
Query: 92 LCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
L K + L + + VMY V++ SK+G L M G N
Sbjct: 142 LFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQG-NTK 200
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS ++D + + + ++ M +K + P F
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIF--------------------- 239
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
T ++ L K G+ ++ + + I + ++ L
Sbjct: 240 ----------------TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CKE + E+ ++R ++E+G P + S + C +G+ + + + DKG+ +
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
F S L+ YC + + KA+ L +I + D TY +L GL + GR+ +A +IFD
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403
Query: 386 M------------------------------------KELKVVSSSSFVIVVSRLCHLKE 409
M + + + S + +V++ LC
Sbjct: 404 MLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDR 463
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+R+A +++ +G PD TY +I+GF
Sbjct: 464 VREAHAIFEKLPSIGLIPDVRTYNVMITGF 493
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 133/364 (36%), Gaps = 72/364 (19%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+ S+++D +G D EV R M G P + +A++D + ++ A
Sbjct: 270 NPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARR 329
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDF 128
++ + G+ PN F++S ++I+ Y KK +
Sbjct: 330 VFNVLRDKGIKPNIFSYS------------------------------ILINGYCKKKNL 359
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A E+ + L P TYS+IL G
Sbjct: 360 AKAMQLFGEISQ-KGLKPDTVTYSTILHG------------------------------- 387
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLI 246
L ++G+ A+ IF ++ D C +L K G V+EA+ ++ +
Sbjct: 388 ------LIEVGRIGDAKKIFDEML--RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
S Y +N LCK + E + + G IP + + C +G +
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
EV+ +L + D G ++ + +M+ + + +I + ++ ++ S D T VL
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559
Query: 367 LDGL 370
++ L
Sbjct: 560 INVL 563
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 2/170 (1%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ L +V +P ++ S+ + + V L + G+ + + +
Sbjct: 44 DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
YC +ID A ++ K +V T++ LL GLF + ++ +AV +F + K+
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163
Query: 392 VSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + V++ L K + M + KPD TY VI
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 191/441 (43%), Gaps = 9/441 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G S L+++++ Y H V+ + G+ P + L+ L +++
Sbjct: 78 HGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKE 137
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
+ + +V G+ + ++ + LC+ G+ L LL + VMYN +ID
Sbjct: 138 SLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIID 197
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K AFD EM R + P TY+S++ G + + + ++ MV K +
Sbjct: 198 GLCKDKLVRDAFDLYCEMFEKR-VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN 256
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ L GK A+ + E + T ++ +A
Sbjct: 257 PN--VCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAK 314
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++++++ G+T Y ++ L K +E L + IP + S +
Sbjct: 315 NVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ + + + D+G + +SL++ C + Q+DKAIAL KI+ ++
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434
Query: 361 ATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY++L+DGL KDGR+ +A ++F D + + V ++ I+++ LC +A+ +
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSK 494
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M G PD Y+ +I+ F
Sbjct: 495 MEDKGCVPDAIAYETIINAFF 515
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 147/347 (42%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D L + +R A LY M V PN T++ + C G+ + GL
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + +V +N ++D K+G A + M + P TY++++DG
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMK-EGVGPDVFTYNALMDGYF 305
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ + + +M + + + +I LS M A +F+ +E +
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCD--VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPD 363
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L K GR+ A++ + +RG Y + ++ LCK HQ ++ LL+
Sbjct: 364 VVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLK 423
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ ++G + V C G+ + +++ +L KG +D S ++ C
Sbjct: 424 KIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKES 483
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
D+A+ L K+E D Y+ +++ F+ ++A ++ M
Sbjct: 484 LFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ---ILCRSGKFEVV 101
P V N L+D L ++ ++R A L M+++GV P+ FT++ + ++ +GK + V
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNV 316
Query: 102 LGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
++ G+ V Y+++I SK A D M N N+ P YSS++DG
Sbjct: 317 FNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRN-ENVIPDVVAYSSLIDGLC 375
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + + V M ++ P + +I L + A + K+ D+ I+
Sbjct: 376 KSGRINSALKYVDEMHDRGQPPNVITYTS--LIDALCKSHQVDKAIALLKKIKDQGIQAN 433
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K+GR+ +A +++ + +G V Y +N LCKE +E LL
Sbjct: 434 MYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ ++G +P A+ + + K + E+LL ++D
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 1/217 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G +L +L K I ++ + GI +N C Q + +++
Sbjct: 53 GKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILK 112
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
GY P + + + C G+ KE ++ +G+ LD +L+ C Q
Sbjct: 113 LGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGP 172
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVS 402
A+ L KIE DV Y+ ++DGL KD + +A ++ M E +V + ++ ++
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIY 232
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + +L KA +EM+ P+ T+ ++ G
Sbjct: 233 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 183/423 (43%), Gaps = 50/423 (11%)
Query: 30 DGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ LE+ MM R G P V + +++ +++ + A Y M+ +SP+ T+S
Sbjct: 176 EALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYS 235
Query: 87 LVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEM--- 138
+ LC+ + + +L S + + VM Y ++ Y G A L ++
Sbjct: 236 SIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSD 295
Query: 139 -CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
L P +TY ++L G ++ LMV + P H++ Y I
Sbjct: 296 GVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYV----YNI----- 346
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
++ A +K+G+V EA+ ++ + ++G+
Sbjct: 347 ----------------------------LICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y A + +LCK + E+ +++ G P + + + C KW+ EEL+ +L
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 438
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
D+G+ L++ +S+++ +C ++ ++ L + ++ D+ TY L+DG G+M+
Sbjct: 439 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA+++ M + + ++ ++ +++ C + + A+ EM G PD TY ++
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558
Query: 437 SGF 439
G
Sbjct: 559 QGL 561
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 171/411 (41%), Gaps = 50/411 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ Y+ +G + + V+ MR G P A++ L + + A + M+
Sbjct: 345 NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMID 404
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
+G+SP ++ + LC K+E ++L +LD GI +++ +N +ID + K+G
Sbjct: 405 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 464
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--- 187
+ ++L ++ + P TYS+++DG K + + +++ MV L P
Sbjct: 465 S-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI 523
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
N Y K+S MG A ++FK + T +L+ L + R A ++Y I+
Sbjct: 524 NGYC--KISRMGD---ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 578
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV------------------------- 282
E G + S Y ++ LCK ++ + +++
Sbjct: 579 ESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNG 638
Query: 283 ----------ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
G +P + G+G +E+++L ++ D G +DS + ++
Sbjct: 639 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 698
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A I++ SL+ +T + +D L G+ +E R
Sbjct: 699 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFL 748
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 12/318 (3%)
Query: 130 AAFDRLNEMC--NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
AA R N M +TP TY+ ++ R ++ ++ +G +V KK ++
Sbjct: 67 AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVV-KKGFRVEAITF 125
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +D + A +++ +R + +C +LK L E R +EA+++ H+++
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMA 185
Query: 248 E--RGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G + D Y +N KE + ++++R P + S +A+ C
Sbjct: 186 DGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK-----IEKLKGSLD 359
+ E+L++++ G++ + +S+M YCS+ Q +AI K +E D
Sbjct: 246 AMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPD 305
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
+ATY LL G G + + D M + + I++ ++ +AM
Sbjct: 306 IATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFS 365
Query: 419 EMLKMGHKPDEATYKQVI 436
+M + G PD TY VI
Sbjct: 366 KMRQQGLNPDAVTYGAVI 383
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 185/429 (43%), Gaps = 25/429 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y GL ++ +M + G V ALL L +R A ++ M DG +P+
Sbjct: 117 YCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPD 176
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLN 136
++ + LC +G+ LL + V+YN +ID Y GD A D
Sbjct: 177 PHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFE 236
Query: 137 EM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
M NG +P TY+ ++ G + K + + + MV+ L+P + +IQ
Sbjct: 237 RMDVNG--CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN--VVTYTALIQGQ 292
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+ A + + + + + TC ++ AL K RV EA + + ++GI V +
Sbjct: 293 CSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNE 352
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + ++ LCK + L++ +V +G++P A S + C + + E +L
Sbjct: 353 IVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDD 412
Query: 316 VLDKGLLLDSFCCSSLMEYYC-------SNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++KG+ + +++ S + +DK IA IK DV TY + +
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKP-------DVFTYTIFVR 465
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+GRME+A + +M + V + ++ ++ +L +A M+ G KP
Sbjct: 466 SYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525
Query: 428 DEATYKQVI 436
+E +Y ++
Sbjct: 526 NEESYTVLL 534
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 187/455 (41%), Gaps = 60/455 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P V NAL+D ++ LA ++ M +G SPN T++ + C+S K +
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266
Query: 102 LGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L +D+G+ +V+ Y +I G A+ L M N L P T S ++D
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS-GLVPNEWTCSVLID 325
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
++E+ + ++G +++K + + + +I L G+ AA+ + + +
Sbjct: 326 ALCKHERVGEAQLLLGSLIQKGIKVNEIVYTS--LIDGLCKAGRFAAADRLMQTLVSQGF 383
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L ++ + EA+ + + E+G+ Y ++ L +E +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY- 335
+L ++ G P + FV S C +G+ ++ E ++ ++D G+ + ++L+ Y
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503
Query: 336 -------------------CSNRQIDKAIALHIKIEK---------------------LK 355
C + + L + I+K L
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563
Query: 356 GSLD----------VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
G L+ + Y+ L L + R++EA + M+ + S + +++
Sbjct: 564 GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACC 623
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C LK L +A+ D M+K G+ P +Y+ +IS
Sbjct: 624 CRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSL 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 26/324 (8%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G F + + + GFVP ++L+D L RQ E+ A + M+ G
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417
Query: 78 VSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V P+ T++++ L R G +++ ++ +GI V Y + + Y +G A
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK---------- 182
+ M + + P TY++++ G T + MV P
Sbjct: 478 HMMLHMVD-HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRL 536
Query: 183 -------HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ + N I K+++M + + + ++ + D C L +L + R
Sbjct: 537 LIKKESSNNIPANSVSIWKIAEMKYLHG---LLEEMVKLQLPSEIDIYNCFLTSLCRVDR 593
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ EA + + +T + Y + + C+ E + +V+ GYIP
Sbjct: 594 LDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH 653
Query: 296 FVASQCGKGKWKEVEELLSAVLDK 319
++S C +G + +++ +L K
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSK 677
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 34/249 (13%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L G+T AE + A E E ++ G ++ A+ ++ + G
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ CK + + L +V+ G +P + + + QC G+
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LL ++ + GL+ + + CS L++ C + ++ +A L + + ++ Y L+DGL
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K GR A R+ ++ + S FV PD
Sbjct: 363 CKAGRFAAADRL------MQTLVSQGFV----------------------------PDAH 388
Query: 431 TYKQVISGF 439
TY +I G
Sbjct: 389 TYSSLIDGL 397
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G + A +++ L+ RG Y A ++ LC E + + G P
Sbjct: 119 RAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPH 178
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGL---------LLDSFC--------------- 327
+ V CG G+ +E E LLS + +G L+D +C
Sbjct: 179 VYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM 238
Query: 328 ----CSS-------LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
CS L+ +C +R++D+A+ L ++ +V TY L+ G DG++
Sbjct: 239 DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQL 298
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ A R+ M+ +V + + +++ LC + + +A +++ G K +E Y +
Sbjct: 299 DCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSL 358
Query: 436 ISGF 439
I G
Sbjct: 359 IDGL 362
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y +N C L ++ G+ P + + FV C G L +
Sbjct: 75 YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+G + +F ++L+ C + +A+++ ++ + D Y ++ GL GR
Sbjct: 135 LRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTR 194
Query: 378 EAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA + D M E + + ++ C++ +L A+ + M G P+ TY ++I
Sbjct: 195 EAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELI 254
Query: 437 SGF 439
SGF
Sbjct: 255 SGF 257
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 197/465 (42%), Gaps = 57/465 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + R G +P+V A N +L L + ++ A ++ M +D +PN
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APN 376
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LCR+GK + L DS G++ +V N+++D K A
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 137 EMCNGRNLTPGFSTYSSILDGARR----------YEKTEVSDRIVGLMVEKKLLPKHFLS 186
EM + + TP T+ S++DG + YEK SD +V L+ F
Sbjct: 437 EM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA----------------- 229
G + D K Y +MI + C ++L + CM KA
Sbjct: 496 G------RKEDGHKIYK-DMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L K G E ++++ + E+G + Y ++ CK + +
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ +G+ P + + + E L K + L+ SSL++ +
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ID+A + ++ + + ++ T++ LLD L K + EA+ F MKELK +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I+++ LC +++ KA EM K G KP +Y +ISG
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 161/378 (42%), Gaps = 9/378 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL+ + ++H G DG ++Y+ M P + N +D +++ E ++ +
Sbjct: 487 SLIKNFFNH-GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGA 130
P+ ++S++ L ++G +E+ + + G + + YN+VID + K G
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A+ L EM + P TY S++DG + ++ + + + K++ + +
Sbjct: 606 AYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS-- 662
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +G+ A +I + + + T +L AL K + EA+ + + E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
T Y +N LCK + + +++ ++G P + + ++ G E
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L G + DS C ++++E + + A +L + + + T VLLD L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 371 FKDGRMEEAVRIFDYMKE 388
K+ +E+A + ++E
Sbjct: 843 HKNDCLEQAAIVGAVLRE 860
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 132/296 (44%), Gaps = 6/296 (2%)
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYVIQKLSDMGKTYAA 204
P FS Y++++ +++ + M E P H + +I+ + G+ +A
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT---LIRGFAKEGRVDSA 222
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ ++ + + K G+V A + +H I G+ + Y + + V
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK ++ +E + + + +PC + + GK+ E LL KG +
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++ ++D+A+ + +++K + +++TY++L+D L + G+++ A + D
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 385 YMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M++ + + V I+V RLC ++L +A +EM PDE T+ +I G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+TC M+ K +++E + ++ + S Y + + + + L +
Sbjct: 134 NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKE----VEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ E GY P + + +G+ ++E+ S+ LD ++L + C S +
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV-- 251
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
++D A +IE D TY ++ L K R++EAV +F+++++ + V +
Sbjct: 252 --GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 178/421 (42%), Gaps = 79/421 (18%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + EV++ M+ G +P V + + L+D R+ + AS ++ M G+ PN +++
Sbjct: 294 GILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSY 353
Query: 86 SLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
S++ C+ G+ EV + +SGI V Y+++ID + +KGD +A EM
Sbjct: 354 SILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM-T 412
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
N +P Y S++ G Y+ + ++ + K F ++QKL
Sbjct: 413 SNNFSPSAFNYCSLIKGY--YKSKQFANAL-----------KEF-----RIMQKLGMWPD 454
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
T A C +L ++ +A+ + E G+ Y
Sbjct: 455 TIA-------------------CNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNE 495
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
F++ +C+ PE+ +LL +L +
Sbjct: 496 FIHRICRGSVPEKAL-----------------------------------QLLPVMLKRN 520
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+L D S+L+ + +KA+ L IK+ K+ + +V TY +L++ D +M+ A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
R+F MKE +V ++ +V+ C+ E+ +A DEM + G P+ TY I+ +
Sbjct: 581 RLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEY 640
Query: 440 M 440
+
Sbjct: 641 L 641
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I+ + A +F RA D+ IEL +C +LK L ++ RV ++ ++ +
Sbjct: 140 DMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIK 199
Query: 249 RGITVRDSDYYAFVNVLCKE-------HQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
G Y +N C+ + E+ G + G P + ++ C
Sbjct: 200 FGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILG---KIYMSGETPNVVTYGTYIKGLC 256
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + L+ + K L++ C ++++ C +D+A + +++ DV
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEM 420
+Y +L+DG + GR+++A +F M+ ++ + S+ I++ C + KA++ +EM
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376
Query: 421 LKMGHKPDEATYKQVISGF 439
G PD +Y +I GF
Sbjct: 377 KNSGILPDVYSYSILIDGF 395
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 162/407 (39%), Gaps = 19/407 (4%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV------ 100
+ +CN LL L N + L+ +++ G PN T++++ CR V
Sbjct: 171 IMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRAS 230
Query: 101 -VLG--LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+LG + + V Y I K G FG A+ + +C +N +++++ G
Sbjct: 231 EILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCR-KNQPLNNHCFNAVIYG 289
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + + + M +LP + +I G+ A +FK + I
Sbjct: 290 LCQGGILDEASEVFKEMKNSGILPDVY--SYSILIDGFCRKGRVDQASEVFKEMRNSGIL 347
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ ++ KEGRV +A++++ + GI Y ++ C++ +
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ + P A + ++ + + G+ D+ C+ ++ YC
Sbjct: 408 WEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCR 467
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+KA+AL K ++ + +Y+ + + + E+A+++ M + V+
Sbjct: 468 KPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD--- 524
Query: 398 VIVVSRL--CHLKELR--KAMKNHDEMLKMGHKPDEATYKQVISGFM 440
V+ S L C K L KA+ +M K+G + TY +I+ F+
Sbjct: 525 VVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFI 571
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/383 (17%), Positives = 168/383 (43%), Gaps = 15/383 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ S+++D + +G LEV+ M+ G +P V + + L+D R+ ++ A + M
Sbjct: 352 SYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM 411
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYS-SVMYNLVIDFYSKKGDF 128
+ SP+ F + + + +S +F L + G++ ++ N ++ Y +K DF
Sbjct: 412 TSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF 471
Query: 129 GAAF---DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A ++ E NG + P +Y+ + R E + +++ +M+++ +LP +
Sbjct: 472 NKALALSEKFQE--NGVHFNP--YSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD--V 525
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I + + A M+F + I T ++ + ++ A +++
Sbjct: 526 VNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG 585
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ E + Y + V C + L ++ G P + + F+ K
Sbjct: 586 MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNK 645
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL-KGSLDVATYD 364
+ +L + ++G+ D + L+ +C+ ++++A AL ++++ + + +V Y
Sbjct: 646 NNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYT 705
Query: 365 VLLDGLFKDGRMEEAVRIFDYMK 387
L++ K + ++A ++++ M+
Sbjct: 706 CLINSYIKLNKRDQAEKLYEEMR 728
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 201/466 (43%), Gaps = 68/466 (14%)
Query: 2 IQSCEGRDSQSDALSLVLD-------------CYSH------KGLFMDGLE-VYRMMRVY 41
+ S EG+ DA+ L+L+ Y+H +G M LE VY M
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+ AL R +++R A + M GV+P++ T++ + Q G E
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 102 LG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPGFSTYSSIL 155
L +L+ G ++ V N++I+ Y K G A + E+ +G P TY++ +
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG--FEPDQITYNTFV 293
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + + +++ +MV++ P F
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVF------------------------------- 322
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ++ L K G+++EA I + + +RG + + + LC ++ EE
Sbjct: 323 ------TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L R V +G P + + + C G L + + G D ++L++
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
CS ++ KA+ L +E TY+ ++DGL K R+EEA +FD M +L+ +S +
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQGISRN 495
Query: 396 --SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ LC K++ A + ++M+ G +P+ TY +++ +
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 182/431 (42%), Gaps = 42/431 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++++ Y G D L + GF P N ++ L + + + A + M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V++G P+ FT+++V LC++G+ E G+
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI----------------------------- 343
Query: 134 RLNEMCNGRNLTPGFSTYSSIL----DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
LN+M + R P +T+++++ G R E +++ ++ V + + L
Sbjct: 344 -LNQMVD-RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL---- 397
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
I L +G + A +F+ + + T ++ L G++ +A+ + +
Sbjct: 398 --INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y ++ LCK+ + EE + + +G A+ + + C K +
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL++ ++ +GL ++ +S++ +YC I KA + + +DV TY L++G
Sbjct: 516 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K GR + A+++ M+ + + ++ V+ L +R A+ EM ++G PD
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 429 EATYKQVISGF 439
TYK V G
Sbjct: 636 ALTYKIVFRGL 646
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V R MR+ G P A N +L +L+R+N IR A L+ M G P+ T+ +V +
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 91 ILCRSG-----KFEVVLGLLDSG 108
LCR G F+ +L ++D G
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKG 667
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 194/464 (41%), Gaps = 44/464 (9%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L+ G F + V + G V CN +L+A+ Q + A L +
Sbjct: 199 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 258
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAA 131
G P+ +++ V + LC + ++ V L++ + + V +N +I + + G F
Sbjct: 259 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 318
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L +M TP Y++I+DG + EV+ I+ M L P + + +
Sbjct: 319 HEVLAQMVE-HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN--VVCYNTL 375
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
++ L + E + D+ L D T ++ + G V I++ + E G
Sbjct: 376 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 435
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N CKE +E LL+ + G P + + + C +W + E+
Sbjct: 436 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 495
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+S ++ +G L+ ++L+ + C +++AI L ++ S D+ +Y ++DGL
Sbjct: 496 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 555
Query: 372 KDGRMEEA-----------------------------------VRIFDYMKELKVVSSSS 396
K G+ +EA +++FD +++ + S +
Sbjct: 556 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAV 615
Query: 397 -FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V+S LC E +A++ M+ G P+E+TY +I G
Sbjct: 616 LYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 186/450 (41%), Gaps = 44/450 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+LVL+ +G + L + R + +G P V + NA+L L L MVR
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
PN T++ + LCR+G FE V+ +++ G + MY +ID K+G
Sbjct: 293 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 352
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK---------KLLP 181
A + LN M L P Y+++L G E+ E ++ ++ M +K +L
Sbjct: 353 AHEILNRM-PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV 411
Query: 182 KHFLSGN--DYVIQKLSDMGK--------TYAAEMIFKRAC-----DEKIELQDD--TCG 224
F D VI+ L M + TY + C DE + L CG
Sbjct: 412 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT--VINGFCKEGLIDEAVMLLKSMTACG 469
Query: 225 C---------MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
C +LK L R +A + + ++G + + +N LCK+ E+
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL+ ++ G P + S + GK E ELL+ +++KG+ ++ SS+
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS- 394
+I+K I + I+ D Y+ ++ L K G E A+ YM V +
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
S++ I++ L +++A + E+ G
Sbjct: 650 STYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 136/315 (43%), Gaps = 45/315 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M +G +P V +++ ++ I A L +M
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
G PN ++++V + LC + ++ L+ I + + +N +I+F KKG
Sbjct: 466 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 525
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KT+ + ++ +MV K + P +
Sbjct: 526 EQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII-- 581
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ + ALS+EGR+ + IQ++ I
Sbjct: 582 --------------YSS---------------------IASALSREGRINKVIQMFDNIQ 606
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + E L +V G +P + + +G K
Sbjct: 607 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 666
Query: 308 EVEELLSAVLDKGLL 322
E +E+L+ + KG L
Sbjct: 667 EAQEMLTELCSKGAL 681
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 110/285 (38%), Gaps = 71/285 (24%)
Query: 226 MLKALSKEGRVKEAIQI---------------YHLISE--------------------RG 250
+++AL GR+ +A+ + YH+I E RG
Sbjct: 165 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 224
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + +N +C + +E LLRD+ G P + + + C +W V+
Sbjct: 225 CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ 284
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+ ++ + ++L+ Y C N ++ + ++ + + D+ Y ++DG+
Sbjct: 285 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 344
Query: 371 FKDGRMEEAVRIFDYMKE-------------LKVVSSS---------------------- 395
K+G +E A I + M LK + S+
Sbjct: 345 CKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 404
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F I+V C + + ++ ++ML+ G PD TY VI+GF
Sbjct: 405 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 449
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y+ V LC + + +L ++ RG P + + C G ++ +L +
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+G LD C+ ++ C +D+A+ L + DV +Y+ +L GL R
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 281
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + M + + +F ++S LC + + +M++ G PD Y +I
Sbjct: 282 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341
Query: 437 SGF 439
G
Sbjct: 342 DGI 344
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 192/423 (45%), Gaps = 30/423 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G+ D L+++ M G +P V LL +L +I A L G+M
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G P++ T++ LC+ G+ F+ ++ L D G + Y+ +ID + F
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
F M RN++P Y+ ++ G + E + + +M +K +P F +
Sbjct: 331 GFGYYKTMLE-RNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCY--NT 387
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V++ L D G A + + L T M+ L K G V EA+QI+ + E G
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG 447
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-------------CAME-LSRF 296
Y A ++ +E + EE +L +E G P C E L +
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKL 506
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
V C G+ + +LL +++D G++ D ++L+ C R +D A+ L +++ LKG
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ-LKG 565
Query: 357 -SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRK 412
S D TY L+DGL + R +A+ +F + L+ SS S I ++ LC +K+L +
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNI--LQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Query: 413 AMK 415
A+
Sbjct: 624 AIN 626
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 179/452 (39%), Gaps = 57/452 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S A + ++ +S G D ++ + M + P N +L AL I LA
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
LY MV G +PN+ T YN+++D K+G
Sbjct: 192 LALYNRMVAAGCAPNRAT------------------------------YNVLMDGLCKQG 221
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH--- 183
G A +EM + R + P Y+ +L K + + +++G M +K LP
Sbjct: 222 MAGDALKMFDEMLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTY 280
Query: 184 --FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
FLSG L +G+ A D L C++ L + R E
Sbjct: 281 NAFLSG-------LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFG 333
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
Y + ER I+ Y + + + E+ L + ++G++P + + C
Sbjct: 334 YYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLC 393
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + L S +L L+LDS + ++ C +D+A+ + ++ + V
Sbjct: 394 DHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVM 453
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMK--------------ELKVVSSSSFVIVVSRLCHL 407
TY+ L+DG +++GR+EEA +F M+ +V S S +V +C
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQS 513
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ KA K ++ G PD TY +I+G
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 165/407 (40%), Gaps = 23/407 (5%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F +G Y+ M P V ++ I A M + G P+ F ++
Sbjct: 328 FDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNT 387
Query: 88 VAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
V ++LC G E L ++ + S ++I K+G A +EM
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEH 446
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS---GNDYV-------- 191
P TY++++DG R + E + R++ +E P FL G + V
Sbjct: 447 GCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRK 505
Query: 192 -IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ + G+ A + + D + T ++ L K + A++++ + +G
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I+ + Y ++ L + H+ + L +++++ G P + + S C K +
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625
Query: 311 ELLSAVLDK--GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L L K ++S ++ + + +D + IKI++ G + Y + L
Sbjct: 626 NLWLDYLPKKYNFPVESEVLANAHKEI-EDGSLDDGVRELIKIDQEYGYISSNPYTIWLI 684
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
GL + R ++A+RIF ++E + ++ + ++++ LC + L A+
Sbjct: 685 GLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAV 731
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 192/435 (44%), Gaps = 18/435 (4%)
Query: 17 LVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
VL+ YS+ GL + L+VY+ M G P++ +AL+ AL R+ +
Sbjct: 188 FVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIM 247
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFY 122
L M G+ PN +T+++ ++L R+G+ + G+L D G V+ Y ++ID
Sbjct: 248 DLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDAL 307
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
G A + +M + P TY +++ Y E R M P
Sbjct: 308 CAAGKLDKAKELYTKM-RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPD 366
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +++ L GK A + I T ++ L R+ EA+++
Sbjct: 367 --VVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
++ + G+ Y F++ K PE+ + +RG +P + + S
Sbjct: 425 FNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAE 484
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ +E +++ + + + GL DS + +M+ Y QIDKA L ++ D+
Sbjct: 485 MGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIV 544
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
+ L+D L+K GR++EA ++F +K+LK+ + ++ I+++ L +L KA+ M
Sbjct: 545 VNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMK 604
Query: 422 KMGHKPDEATYKQVI 436
+ G P+ T+ ++
Sbjct: 605 ESGCPPNTVTFNALL 619
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 159/379 (41%), Gaps = 8/379 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D G E+Y MR P + L+ ++ + M
Sbjct: 301 TVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA 360
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
DG +P+ T++++ + LC+SGK + +LD GI ++ YN +I
Sbjct: 361 DGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + N M + P +Y +D + E + M ++ ++P ++ +
Sbjct: 421 ALELFNNM-ESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS--IAACNA 477
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ L++MG+ A+ IF + + T M+K SK G++ +A ++ + G
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ ++ L K + +E + + + P + + + +GK +
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L ++ + G ++ ++L++ C N +D A+ + ++ + S DV TY+ ++ GL
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657
Query: 371 FKDGRMEEAVRIFDYMKEL 389
K+GR A + MK+
Sbjct: 658 IKEGRAGYAFWFYHQMKKF 676
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/486 (19%), Positives = 197/486 (40%), Gaps = 64/486 (13%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY--- 58
I +C G S ++++ CYS G ++ M G P + N+L+D LY
Sbjct: 498 IHNC-GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAG 556
Query: 59 ----------RQNEIRLASC----------------------LYGAMVRDGVSPNKFTWS 86
R +++LA L+G+M G PN T++
Sbjct: 557 RVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFN 616
Query: 87 LVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+ LC++ ++ L + D Y++++Y L+ K+G G AF +
Sbjct: 617 ALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLI-----KEGRAGYAFWFYH 671
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VI 192
+M + L+P T ++L G + + E + +IV V + L + +I
Sbjct: 672 QM--KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILI 729
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GI 251
+ + ++A ++ C + D+ +++ L K+ + +A +++ ++ G
Sbjct: 730 EAEIEEAISFAEGLVCNSICQD-----DNLILPLIRVLCKQKKALDAKKLFDKFTKSLGT 784
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ L + E L ++ G P + + + + E+ E
Sbjct: 785 HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + +L +G + + ++ + I+KA+ L+ +I S TY L+ GL
Sbjct: 845 LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLL 904
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K GR EEA++IF+ M + + + + + I+++ + A M+K G +PD
Sbjct: 905 KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964
Query: 431 TYKQVI 436
+Y ++
Sbjct: 965 SYTILV 970
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 182/486 (37%), Gaps = 85/486 (17%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
L +D Y G L+ + M+ G +P+++ACNA L +L IR A ++ +
Sbjct: 442 LFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAA 131
G+SP+ T++++ + ++G+ + LL + ++ N +ID K G A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 132 ---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
F RL ++ L P TY+ ++ G + K + + G M E P N
Sbjct: 562 WQMFGRLKDL----KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPP------N 611
Query: 189 DYVIQKLSD-MGKTYAAEMIFKRACDEKI-ELQDD--TCGCMLKALSKEGRVKEAIQIYH 244
L D + K A ++ K C I D T ++ L KEGR A YH
Sbjct: 612 TVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYH 671
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + D+ +L G+++D I ME Q
Sbjct: 672 QMKK----FLSPDHVTLYTLLP---------GVVKDGRVEDAIKIVMEFVHQSGLQTSNQ 718
Query: 305 KWKEVEE--LLSAVLDK------GLLLDSFCCS-----SLMEYYCSNRQIDKAIALHIKI 351
W E+ E L+ A +++ GL+ +S C L+ C ++ A L K
Sbjct: 719 VWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKF 778
Query: 352 EKLKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKE-------------LKVVSSSSF 397
K G+ +Y+ L+DGL E A+++F MK L S
Sbjct: 779 TKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKR 838
Query: 398 V-----------------------IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+ I++S L + KA+ + E++ P TY
Sbjct: 839 IDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGP 898
Query: 435 VISGFM 440
+I G +
Sbjct: 899 LIGGLL 904
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 142/356 (39%), Gaps = 43/356 (12%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+ + G P + N L+D L N A L+ M G PN FT++L+ +S
Sbjct: 777 KFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKS 836
Query: 96 GK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ FE+ +L G +++ +N++I K A D E+ +G + +P T
Sbjct: 837 KRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG-DFSPTPCT 895
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y ++ G + ++E + +I M + + P + + +I G A +FKR
Sbjct: 896 YGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIY--NILINGFGKAGNVNIACDLFKR 953
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
E I + +++ L GRV +A+ + + G+ Y +N L K +
Sbjct: 954 MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
EE L S + ++G+ + + ++
Sbjct: 1014 LEEAL-----------------------------------SLFSEMKNRGISPELYTYNA 1038
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L+ ++ + +D+A + +++ + +V TY+ L+ G K G + A +F M
Sbjct: 1039 LILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+TC ML+ L GRV++ ++ L+ ++ I + Y L + + L
Sbjct: 123 ETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGK 182
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + G++ A + + G KE ++ ++ +GL S+LM R
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVI 399
+ L ++E L ++ TY + + L + GR+++A I M++ ++ +
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC +L KA + + +M HKPD TY ++S F
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKF 342
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 201/473 (42%), Gaps = 69/473 (14%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M + G P N L+ AL + + A L+ M G PN+FT+ ++ + C
Sbjct: 134 LYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 94 RSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
++G + L LL+S G+ + V+YN ++ + ++G + ++L E L P
Sbjct: 194 KAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDS-EKLVEKMREEGLVPDI 252
Query: 149 STYSS----------ILDGARRYEKTEVSDRI-------------------VGLMVEKKL 179
T++S +LD +R + E+ + + VGL+ + K
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 180 LPKHFLSGNDYV--------IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
L + +D V +Q L GK AE + K+ D+ I + ++ L
Sbjct: 313 LFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLC 372
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K G + +A I L+ G++ Y ++ C + + LL++++ +P A
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + S G+ E EELL + +KG LD+ C+ +++ C + ++DKAI + +K
Sbjct: 433 TCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI-VKG 491
Query: 352 EKLKGSL------------------------DVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++ GS D+ TY LL+GL K GR EA +F M
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMM 551
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+ S ++ I + C ++ A + +M K G TY +I G
Sbjct: 552 GEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 195/456 (42%), Gaps = 38/456 (8%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD- 76
++ + +G D ++ MR G VP + N+ + AL ++ ++ AS ++ M D
Sbjct: 223 IVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 77 --GVS-PNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDF 128
G+ PN T++L+ + C+ G E L +S + S YN+ + + G F
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKF 342
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L +M + + + P +Y+ ++DG + + IVGLM + P G
Sbjct: 343 IEAETVLKQMID-KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYG- 400
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ +GK AA+ + + TC +L +L GR+ EA ++ ++E
Sbjct: 401 -CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVC----------------------GLLRD-VVERG 285
+G + V+ LC + ++ GL+ D ++E
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+P + S + C G++ E + L + ++ + L DS + + ++C +I A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAF 579
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSR 403
+ +EK + TY+ L+ GL ++ E + D M+E K +S + ++ +
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMRE-KGISPNICTYNTAIQY 638
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC ++ A DEM++ P+ ++K +I F
Sbjct: 639 LCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAF 674
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 156/392 (39%), Gaps = 62/392 (15%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----E 99
+P CN LL +L+ I A L M G + T +++ LC SG+ E
Sbjct: 428 LPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 100 VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+V G+ G S+ + NL + G D L E N P TYS++L+G
Sbjct: 488 IVKGMRVHG--SAALGNLGNSY------IGLVDDSLIE----NNCLPDLITYSTLLNGLC 535
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK----RACDEK 215
+ + + + M+ +KL P + I GK +A + K + C +
Sbjct: 536 KAGRFAEAKTLFAEMMGEKLQPDSL--AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+E T ++ L + ++ E + + E+GI+ Y + LC+ + E+
Sbjct: 594 LE----TYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDAT 649
Query: 276 GLLRDVVERGYIP-------------------CAMELSRFVASQCGK------------- 303
LL +++++ P A E+ S CG+
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL 709
Query: 304 --GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA-LHIKIEKLKGSLDV 360
G+ + ELL AVLD+G L +F L+ C +++ A LH I+K G D
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYG-FDP 768
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
A ++DGL K G +EA + M E+ V
Sbjct: 769 AALMPVIDGLGKMGNKKEANNFAEKMMEMASV 800
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 177/444 (39%), Gaps = 35/444 (7%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F++ V + M G P++ + N L+D L + + A + G M R+GVSP+ T+
Sbjct: 340 GKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTY 399
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI------------------DFYSKKGD 127
+ C GK + LL + ++ + N + K +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459
Query: 128 FGAAFDRL--NEMCNGRNLTPGFSTYSSILDGARRYEKT---EVSDRIVGL----MVEKK 178
G D + N + +G + I+ G R + + + +GL ++E
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
LP L ++ L G+ A+ +F EK++ + K+G++
Sbjct: 520 CLPD--LITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISS 577
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++ + ++G Y + + L ++Q E+ GL+ ++ E+G P + +
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQ 637
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK ++ LL ++ K + + F L+ +C D A + + G
Sbjct: 638 YLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV---IVVSRLCHLKELRKAMK 415
+ Y ++ + L G++ +A + + + + + +F+ +VVS LC EL A
Sbjct: 698 E-GLYSLMFNELLAAGQLLKATELLEAVLD-RGFELGTFLYKDLVVS-LCKKDELEVASG 754
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+M+ G+ D A VI G
Sbjct: 755 ILHKMIDKGYGFDPAALMPVIDGL 778
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 152/345 (44%), Gaps = 12/345 (3%)
Query: 104 LLDSGIYSSVMYNL--VIDFYSKKGDFGAAFDRLNEMCNGR--NLTPGFSTYSSILDGAR 159
+L S I + + +L V+ ++K AF + + R PG Y+ +L+
Sbjct: 65 ILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF-QFVRSRFPENKPGIYLYNVLLESCI 123
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R + E + MV + P+ + + +I+ L D AA +F ++ +
Sbjct: 124 RERRVEFVSWLYKDMVLCGISPETYTF--NLLIRALCDSSCVDAARELFDEMPEKGCKPN 181
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ T G +++ K G + +++ + + G+ Y V+ C+E + ++ L+
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVE 241
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV-LDKGLLL---DSFCCSSLMEYY 335
+ E G +P + + +++ C +GK + + S + LD+ L L +S + +++ +
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS- 394
C ++ A L I + + + +Y++ L GL + G+ EA + M + + S
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSI 361
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ I++ LC L L A M + G PD TY ++ G+
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGY 406
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
G Q D+L+ + + + +G V + M G ++ N+L+ L +N+I
Sbjct: 552 GEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VI 119
L M G+SPN T++ Q LC GK E LLD + ++ N+ +I
Sbjct: 612 EIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 120 DFYSKKGDFGAA 131
+ K DF A
Sbjct: 672 GAFCKVPDFDMA 683
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 201/466 (43%), Gaps = 68/466 (14%)
Query: 2 IQSCEGRDSQSDALSLVLD-------------CYSH------KGLFMDGLE-VYRMMRVY 41
+ S EG+ DA+ L+L+ Y+H +G M LE VY M
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+ AL R +++R A + M GV+P++ T++ + Q G E
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 102 LG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPGFSTYSSIL 155
L +L+ G ++ V N++I+ Y K G A + E+ +G P TY++ +
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG--FEPDQITYNTFV 293
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + + +++ +MV++ P F
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVF------------------------------- 322
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ++ L K G+++EA I + + +RG + + + LC ++ EE
Sbjct: 323 ------TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L R V +G P + + + C G L + + G D ++L++
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
CS ++ KA+ L +E TY+ ++DGL K R+EEA +FD M +L+ +S +
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQGISRN 495
Query: 396 --SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ LC K++ A + ++M+ G +P+ TY +++ +
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 182/431 (42%), Gaps = 42/431 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++++ Y G D L + GF P N ++ L + + + A + M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V++G P+ FT+++V LC++G+ E G+
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI----------------------------- 343
Query: 134 RLNEMCNGRNLTPGFSTYSSIL----DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
LN+M + R P +T+++++ G R E +++ ++ V + + L
Sbjct: 344 -LNQMVD-RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL---- 397
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
I L +G + A +F+ + + T ++ L G++ +A+ + +
Sbjct: 398 --INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y ++ LCK+ + EE + + +G A+ + + C K +
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL++ ++ +GL ++ +S++ +YC I KA + + +DV TY L++G
Sbjct: 516 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K GR + A+++ M+ + + ++ V+ L +R A+ EM ++G PD
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 429 EATYKQVISGF 439
TYK V G
Sbjct: 636 ALTYKIVFRGL 646
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V R MR+ G P A N +L +L+R+N IR A L+ M G P+ T+ +V +
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 91 ILCRSG-----KFEVVLGLLDSG 108
LCR G F+ +L ++D G
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKG 667
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 189/457 (41%), Gaps = 50/457 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ + + + M G P VS N +++ L R N + G M + GV P+ T++
Sbjct: 42 YTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTT 101
Query: 88 VAQILCRSGKFE-----------------------VVLGLLDSGIYSSVM---------- 114
+ LC G ++ GL G S+ +
Sbjct: 102 IVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN 161
Query: 115 -------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
Y+ V+D K G A D ++M G+ + P TY+ ++ G +++ + +
Sbjct: 162 CNLDVTAYSAVVDGLCKDGMVFEALDLFSQM-TGKGIQPNLFTYNCLIHGLCNFDRWKEA 220
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
++ M+ K ++P + + + + G A+ IF IE T ++
Sbjct: 221 APLLANMMRKGIMPD--VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSII 278
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
A ++K+A++++ L+ +G Y + ++ C+ + L ++V G
Sbjct: 279 GAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLD 338
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + S + C GK +EL + G L D C+ +++ +A++L
Sbjct: 339 PDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 398
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCH 406
++EK+ LD+ Y ++L+G+ G++ +A+ +F Y+ V + ++ I+++ LC
Sbjct: 399 FRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCK 458
Query: 407 LKELRKAMKNHDEMLKM---GHKPDEATYKQVISGFM 440
L A D ++KM G PDE TY + G +
Sbjct: 459 EGLLDDA---EDLLMKMEENGCPPDECTYNVFVQGLL 492
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 143/349 (40%), Gaps = 14/349 (4%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
V+A +A++D L + + A L+ M G+ PN FT++ + LC +++ LL
Sbjct: 166 VTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLA 225
Query: 107 SGIYSSVM-----YNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGA 158
+ + +M +N++ + K G A F + M N+ TY+SI+
Sbjct: 226 NMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVV----TYNSIIGAH 281
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ + + + LM+ K LP + + +I + A + ++
Sbjct: 282 CMLNQMKDAMEVFDLMIRKGCLPN--IVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDP 339
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ K G+ A +++ ++ + G ++ L K H E L
Sbjct: 340 DVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLF 399
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
R++ + + S + C GK + EL S + KG+ +D + ++ C
Sbjct: 400 RELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKE 459
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+D A L +K+E+ D TY+V + GL + + ++ + +MK
Sbjct: 460 GLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMK 508
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 144/368 (39%), Gaps = 45/368 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A S V+D G+ + L+++ M G P + N L+ L + + A+ L M
Sbjct: 168 AYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANM 227
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDF 128
+R G+ P+ T++++A ++G + GI ++ V YN +I +
Sbjct: 228 MRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQM 287
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + M + P TY+S++ G + + +G MV L P +
Sbjct: 288 KDAMEVFDLMIR-KGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPD--VVTW 344
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSK--------------- 232
+I GK AA+ +F + +L D TC +L L K
Sbjct: 345 STLIGGFCKAGKPVAAKELF-FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE 403
Query: 233 --------------------EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
G++ +A++++ +S +G+ + Y +N LCKE +
Sbjct: 404 KMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLD 463
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LL + E G P + FV + + + + L + KG ++ L+
Sbjct: 464 DAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 523
Query: 333 EYYCSNRQ 340
Y+ +N++
Sbjct: 524 NYFSANKE 531
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 7/163 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G D S ++ + G + E++ +M +G +P + C +LD L++ +
Sbjct: 335 NGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSE 394
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVID 120
A L+ + + + +S++ +C SGK L L G+ V YN++I+
Sbjct: 395 AMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIN 454
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYE 162
K+G A D L +M P TY+ + G RRYE
Sbjct: 455 GLCKEGLLDDAEDLLMKM-EENGCPPDECTYNVFVQGLLRRYE 496
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 196/433 (45%), Gaps = 18/433 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D E + YGF P + +L L L+ M+
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SG---IYSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L+ SG ++ + N+VI+ K+G
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF LN M +P +Y+++L G R E+ E + ++ MV K P ++ N +
Sbjct: 339 AFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE-VTFNTF 396
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ L G A M+ ++ + E+ T ++ +GRV A+++++ + +
Sbjct: 397 IC-ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 455
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
T+ Y + LC + + LL +++++ P + + V+ C KG E
Sbjct: 456 NTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+ +++ G + ++L++ ++ ++A+ L + S D+ TY ++ L
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572
Query: 371 FKDGRMEEAVRIFDYMKEL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
++ R+EEA+++F +++L K V + ++ + + C+ A+ M+ G
Sbjct: 573 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD---GAIDFFAYMVSNGCM 629
Query: 427 PDEATYKQVISGF 439
P+E TY +I G
Sbjct: 630 PNELTYITLIEGL 642
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 186/421 (44%), Gaps = 13/421 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+G D V R G V A N L+ R ++ A L +M V+P+ +
Sbjct: 90 RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAY 146
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + + LC G+ L LLD ++ S V Y ++++ K FG A + L+EM
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ TP TY+ I++G R + + + + + P V++ L
Sbjct: 207 -RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV--SYTTVLKGLCAA 263
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ E +F ++ + T +++ + G V+ AIQ+ +S G +
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N +CK+ + ++ L ++ G P + + + C +W++ +ELL ++
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
K + ++ + C I++A L ++ + +++ TY+ L++G GR++
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 379 AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
A+ +F Y K ++ ++ +++ LC+ + L A + EML+ P+ T+ ++S
Sbjct: 444 ALELF-YSMPCK-PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501
Query: 439 F 439
F
Sbjct: 502 F 502
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 138/358 (38%), Gaps = 44/358 (12%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + + ++V++ +G D + M YG P + +L L R
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLV 118
A L MVR PN+ T++ ILC+ G E L++ + V YN +
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
++ + +G +A + M P TY+++L G E+ + + ++ M++K
Sbjct: 432 VNGFCVQGRVDSALELFYSM----PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 179 LLPK--HFLSGNDYVIQK-LSDMGKTYAAEMIFKRAC--------------------DEK 215
P F + QK L D +M+ + C +E
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM-EHGCTPNLITYNTLLDGITNDCNSEEA 546
Query: 216 IELQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+EL T ++ LS+E RV+EAI+++H++ + G+ + Y +
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
LCK + +V G +P + + + KE +LL + +G+L
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L+ RG P ++ + + C +G+ + +L A G +D F ++L+
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
YC Q+D A L I + + D TY ++ GL GR+ EA+ + D M
Sbjct: 121 AGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ +++ +C +AM+ DEM G P+ TY +I+G
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 194/417 (46%), Gaps = 11/417 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
VYR M +P+ + +AL++ + +L + G +++ G + N F ++V +
Sbjct: 93 AFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLK 152
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LCR+G +GL+ SV YN +I+ K A L EM
Sbjct: 153 GLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCF 211
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P T ++++DG + + + + ++ M +K L G +I + G +
Sbjct: 212 PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT--LISGFCNNGNLDRGK 269
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F + I T C++ L + G+ KEA + + ++E GI Y ++ L
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + LL +VE+G P + + ++ C +G + ++L +++KG D
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 389
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIF 383
++LM+ C ++D+A+ L + + L +V T+++L+ GL K+GR+ +AV+I
Sbjct: 390 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449
Query: 384 DYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M K+ + ++ +++ ++++AM+ ++L +G P+ TY +I GF
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 192/436 (44%), Gaps = 19/436 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+LS +++C++ G V ++ GF V N +L L R + A L M
Sbjct: 111 SLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREM 170
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDF 128
R VSP+ +++ + LC++ K + +GLL +G + +SV ++D K G
Sbjct: 171 GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRM 230
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + L M + Y +++ G E+ D ++G + ++
Sbjct: 231 DEAMELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
L + L +G+ A + + I T ++ L K+GR A+ + +
Sbjct: 290 L------VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
L+ E+G + Y ++ LCKE + +LR ++E+G + + + C KG
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403
Query: 305 KWKEVEELLSAVLDKGLLLDS--FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
K E +L +++ D L+ F + L+ C ++ KA+ +H K+ K ++ T
Sbjct: 404 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 463
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y++LL G K G+++EA+ ++ + +L V +S ++ I++ C ++ L A EM
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 523
Query: 422 KMGHKPDEATYKQVIS 437
G P Y +++
Sbjct: 524 THGLNPALFDYNTLMA 539
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 184/414 (44%), Gaps = 23/414 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P C L+D L + + A L AM + G + + + C +G
Sbjct: 205 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 264
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E+ +L GI ++V+ Y+ ++ + G + A LN M + P TY+
Sbjct: 265 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE-HGIHPDVVTYT 323
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++DG + + + ++ LMVEK P + + ++ L G A I +
Sbjct: 324 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY--NVLLSGLCKEGLVIDAFKILRMMI 381
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI--SERGITVRDSDYYAFVNVLCKEHQ 270
++ + T ++K L +G+V EA+++++ + +E + + + LCKE +
Sbjct: 382 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 441
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ + R +V++G + + + GK KE EL VLD G + +SF S
Sbjct: 442 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 501
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK--- 387
L++ +C R ++ A L ++ + + Y+ L+ L K+G +E+A +F M
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561
Query: 388 -ELKVVSSSSFV---IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
E ++S ++ + + +KEL+ +M++MG +PD T+ +I+
Sbjct: 562 CEPDIISFNTMIDGTLKAGDFQFVKELQM------KMVEMGLRPDALTFSTLIN 609
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 39/325 (12%)
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N ++D ++ ++G AF M + ++ P F + S++++ +K ++ +VGL++
Sbjct: 78 NFLVDALARSRNYGLAFSVYRRMTH-VDVLPSFGSLSALIECFADAQKPQLGFGVVGLVL 136
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
++ F+ +LK L + G
Sbjct: 137 KRGFTVNVFIMN-------------------------------------IVLKGLCRNGG 159
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V EA+ + + + ++ Y +N LCK + +E GLL ++ G P ++ +
Sbjct: 160 VFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 219
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G+ E ELL A+ KG D +L+ +C+N +D+ L ++
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
S +V TY L+ GL + G+ +EA + + M E + ++ ++ LC AM
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ M++ G +P TY ++SG
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGL 364
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 179/474 (37%), Gaps = 95/474 (20%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D G + +E+ M+ GF V L+ + L+ M+
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+S N T+S + LCR G+++ V+ + + GI+ V+ Y +ID K G
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D LN M + P TY+ +L G + + +I+ +M+EK K + +
Sbjct: 338 AMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG--KKADVVTYNT 394
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGR------------- 235
+++ L D GK A +F D + L+ + T ++ L KEGR
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454
Query: 236 ----------------------VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+KEA++++ + + G Y ++ CK
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 514
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
GL ++ G P + + +AS C +G ++ + L +
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM----------------- 557
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-- 391
N + D+ +++ ++DG K G F ++KEL++
Sbjct: 558 ---GNANCEP---------------DIISFNTMIDGTLKAGD-------FQFVKELQMKM 592
Query: 392 ------VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +F +++RL L EL +A + M+ G PD Y ++ G
Sbjct: 593 VEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 14/344 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + +++L +GL +D ++ RMM G V N L+ L + ++
Sbjct: 348 KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDE 407
Query: 66 ASCLYGAMV--RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLV 118
A L+ +M + + PN FT++++ LC+ G+ + + + V YN++
Sbjct: 408 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNML 467
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ K G A + ++ + P TYS ++DG + ++ + M
Sbjct: 468 LGGCLKAGKIKEAMELWKQVLD-LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526
Query: 179 LLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L P F DY ++ L G A+ +F+ + E + M+ K G
Sbjct: 527 LNPALF----DYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 582
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ ++ + E G+ + +N L K + +E L +V G+ P A+
Sbjct: 583 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 642
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ KG E+ LL + KG +LD S+++ C + Q
Sbjct: 643 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ 686
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F A D + TC ++ AL++ A +Y ++ + A +
Sbjct: 61 LFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFA 120
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+P+ G++ V++RG+ ++ + C G E L+ + K + D
Sbjct: 121 DAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIV 180
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L+ C +++ +A+ L +++E + T L+DGL KDGRM+EA+ + + M
Sbjct: 181 SYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 240
Query: 387 KELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+ + + ++S C+ L + + DEML G + TY ++ G
Sbjct: 241 KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 8/259 (3%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G ++++R M G + N LL + +I+ A L+ ++ G PN FT
Sbjct: 439 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 498
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
+S++ C+ + GL G+ ++ YN ++ K+G A EM
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
N N P ++++++DG + + + MVE L P +I +LS +G
Sbjct: 559 NA-NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST--LINRLSKLG 615
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A+ +R +LK LS +G E I + H ++ +G +
Sbjct: 616 ELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVS 675
Query: 260 AFVNVLCKEHQPEEVCGLL 278
+ LC Q +V LL
Sbjct: 676 TILTCLCHSIQEVDVMELL 694
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 182/415 (43%), Gaps = 46/415 (11%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ ++ M++ G P + CN ++ + ++ ASC G M++ G P+ T++ +
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 92 LCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLT 145
C + E + L D G +V+ Y +I K A + N+M NG
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR-- 220
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++ G L ++G+ A
Sbjct: 221 PNVVTYNALVTG-------------------------------------LCEIGRWGDAA 243
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + +IE T ++ A K G++ EA ++Y+++ + + Y + +N L
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C +E + + G P + + + C + ++ ++ + KG++ ++
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ L++ YC + D A + ++ + D+ TY+VLLDGL +G++E+A+ IF+Y
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M++ ++ ++ ++ I++ +C L ++ A + G KP+ TY +ISGF
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 170/405 (41%), Gaps = 47/405 (11%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+MM++ GF P + +LL+ N I A L+ ++ G PN T++ + + LC++
Sbjct: 143 KMMKL-GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 96 GKFEVVLGLLDS-GIYSS----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ L + G S V YN ++ + G +G A L +M R + P T
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK-RRIEPNVIT 260
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+++++D + K + + +M++ + P F G+ +I L G A +F
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS--LINGLCMYGLLDEARQMFYL 318
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ ++ K RV++ ++I++ +S++G+ Y + C +
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
P+ + + R P + +LLD CC
Sbjct: 379 PDVAQEVFNQMSSRRAPP--------------------------DIRTYNVLLDGLCC-- 410
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF--DYMKE 388
N +++KA+ + + K + +++ TY +++ G+ K G++E+A +F + K
Sbjct: 411 -------NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+K + ++ ++S C + +A +M + G P+E+ YK
Sbjct: 464 MK-PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 128/343 (37%), Gaps = 39/343 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ Y H D + ++ + GF P V L+ L + + A L+ M +G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
PN T++ + LC G++ LL + + N++ ID + K G A
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---- 188
+ N M ++ P TY S+++G Y + + ++ LM P +
Sbjct: 279 ELYNVMIQ-MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 189 -----------------------------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+IQ +G+ A+ +F + +
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L G+V++A+ I+ + +R + + Y + +CK + E+ L
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ +G P + + ++ C +G E + L + + G L
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++D + G M+ E+Y +M P V +L++ L + A ++ M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDF 128
R+G PN+ ++ + C+S + E + + G+ + ++ Y ++I Y G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + N+M + R P TY+ +LDG K E + I M ++++ +
Sbjct: 380 DVAQEVFNQM-SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN--IVTY 436
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+IQ + +GK A +F + ++ T M+ + G + EA ++ + E
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 249 RGITVRDSDY 258
G +S Y
Sbjct: 497 DGFLPNESVY 506
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 13/354 (3%)
Query: 93 CRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C +G L LL+ +G + + +I + GD A D L M P
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM----GCDPN 56
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY++++ R +K E + +++ M E+ P L + ++ L + AA+ +
Sbjct: 57 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPN--LVTYNVLVDALCKLSMVGAAQDV 114
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K+ + T ++ K G V +A ++ ++ +G+ Y A ++ LCK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ E +L ++ G P A S + C K +E E++L + G D
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
SS++ +C + ++ +A ++ K + S DV TY+ ++DGL K G++ EA I D M+
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Query: 388 ELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E V ++ V++ LC L +A K D M K G PD TY +I G
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 179/417 (42%), Gaps = 41/417 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +++ MR G P + N L+DAL + + + A + M+ G +PN T++ +
Sbjct: 75 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 134
Query: 90 QILCRSGKFE---VVLGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ G + +LG++ + G+ +V+ Y+ +ID K F A + L EM +
Sbjct: 135 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM-KASGV 193
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TP TYS+++ G + +K E +++++ M P + + +I GK A
Sbjct: 194 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS--IIHAFCKSGKLLEA 251
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVN 263
+ + ++ T ++ L K G++ EA I + E G + D Y +N
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK E LL + + G P + + + C G+ +E E LL + G
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ ++L+ C R++D+A + ++ ++ TY+ +++GL GR++EA ++
Sbjct: 372 NVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLV 431
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
MK+ + S PD ATY+ +++ M
Sbjct: 432 QRMKDGRAECS--------------------------------PDAATYRTIVNALM 456
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 9/307 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + +G D ++ +M G P V +AL+D L + + A + M G
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
V+P+ FT+S + LC++ K E +L SG V+Y+ +I + K G A
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYV 191
L EM R +P TY++++DG + K + I+ M E +LP V
Sbjct: 253 KTLQEMRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST--V 309
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I L A+ + R C T ++ L K GR++EA + + G
Sbjct: 310 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 369
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ LCK + +E ++ ++ G P + + V C G+ KE ++
Sbjct: 370 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 429
Query: 312 LLSAVLD 318
L+ + D
Sbjct: 430 LVQRMKD 436
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 187/419 (44%), Gaps = 12/419 (2%)
Query: 30 DGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ LE+ MM R G P V + +++ +++ + A Y M+ +SP+ T+S
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235
Query: 87 LVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ LC+ EV+ ++ +G+ + M YN ++ Y A L +M
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM-RS 294
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ P TY+S++D + ++ + +I M ++ L P ++ ++Q + G
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD--IATYCTLLQGYATKGAL 352
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+ I ++ A +K+ +V EA+ ++ + + G+ Y A
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ +LCK ++ +++ G P + + + S C KW + EEL+ +LD+G+
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L++ +S++ +C ++ ++ L + ++ +V TY L+DG G+M+EA +
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + + ++ +++ C + + A+ EM+ G P+ TY ++ G
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 183/465 (39%), Gaps = 81/465 (17%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V ++++ AL + + A + MV++GV PN T++ + C S + + +G
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGF 288
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L G+ V+ YN ++D+ K G A + M R L P +TY ++L G
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK-RGLEPDIATYCTLLQGYA 347
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ LMV + P H + + +I + K A ++F + +
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVF--NILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC------------- 266
T G ++ L K G V +A+ + + + G+T Y + ++ LC
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 267 ----------------------KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
KE + E L +V G P + S + C G
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----------------- 347
K E +LLS++ G+ D ++L+ YC ++D A+AL
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 348 ------------------HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY--MK 387
++ I K L+++TY+++L GL K+ +EA+R+F +
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+L+ + + +F I++ L + +A + G PD TY
Sbjct: 646 DLQ-LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 689
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 13/320 (4%)
Query: 129 GAAFDRLNEMC--NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
AA R N M +TP TY ++ R + ++ +G +V KK ++
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVV-KKGFRVEAIT 124
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +D + A +++ +R + +C +LK L E R +EA+++ H++
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184
Query: 247 SER--GITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
++ G + D Y +N KE ++ ++++R P + S +A+ C
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+ E+L+ ++ G++ + +S++ YCS+ Q +AI K+ DV TY
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ L+D L K+GR EA +IFD M E + + + + + L E+ + D
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL---DL 361
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G PD + +I +
Sbjct: 362 MVRNGIHPDHHVFNILICAY 381
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 150/367 (40%), Gaps = 35/367 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y+ KG ++ + +M G P N L+ A +Q ++ A ++ M + G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
++PN T+ V ILC+SG + D+ +Y + +ID
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVD------DAMLY----FEQMID----------------- 434
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLS 196
LTP Y+S++ ++K + ++ ++ M+++ + L F + +I
Sbjct: 435 ----EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS---IIHSHC 487
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G+ +E +F ++ T ++ G++ EA ++ + G+
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +N C+ + ++ L +++V G P + + + + +EL +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G L+ + ++ C N D+A+ + + L+ T+++++ L K GR
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667
Query: 377 EEAVRIF 383
+EA +F
Sbjct: 668 DEAKDLF 674
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 133/300 (44%), Gaps = 8/300 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + V+ MR +G P V A++ L + + A + M+ +G++PN ++ +
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Query: 90 QILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC K+ E++L +LD GI +++ +N +I + K+G + ++L ++ +
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES-EKLFDLMVRIGV 507
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TYS+++DG K + + +++ M + P + +I + + A
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY--NTLINGYCRVSRMDDA 565
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+FK + T +L+ L R A ++Y I++ G + S Y ++
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + +E + +++ + + + G+ E ++L +A+ GL+ D
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N+++ + ++ + + L+ MVR GV PN T+S + C +GK + LL S ++
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSS-MF 538
Query: 111 S------SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
S V YN +I+ Y + A EM + ++P TY+ IL G +T
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITYNIILQGLFHTRRT 597
Query: 165 EVSDRI-VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ + VG+ L LS + ++ L T A +F+ C ++L+ T
Sbjct: 598 AAAKELYVGITKSGTQLE---LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
M+ AL K GR EA ++ +S G+ V D Y+ +
Sbjct: 655 NIMIGALLKVGRNDEAKDLFAALSANGL-VPDVRTYSLM 692
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 177/400 (44%), Gaps = 18/400 (4%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
Y P V + N +++ L+++ E+ A L+ M+ G PN T++ V LC++ +
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192
Query: 101 VLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
+L M++ KG A L +M G L P TYS ++D +
Sbjct: 193 AEAVLQQ------MFD--------KGQLEEAVRLLKKMSGG-GLQPDVVTYSLLIDYYCK 237
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ + I MV + P + ++ + G + + I L+D
Sbjct: 238 IGRCTEARNIFDSMVRRGQNPDAYTYRT--LLHGYATKGALVDMHDLLALMIQDGIPLED 295
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+++A +K + +A+ + + ++G + Y +++LCK + E+
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+V G P + + + C G+WK+VE+L ++++G+ ++ +++M+ C +
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
+ +A +I + DV +Y +L+DG DG+M+E++++ M + + + ++
Sbjct: 416 VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSA 475
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C + A+ + EM KP+ TY ++ G
Sbjct: 476 LLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGL 515
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 181/408 (44%), Gaps = 11/408 (2%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
MIQ +G + ++++ Y+ + + MR GF P V ++D L +
Sbjct: 286 MIQ--DGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKA 343
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDSGIYSSVMY- 115
+ A + MV +G+SP+ T++ + LC G+++ V +++ GI+ + ++
Sbjct: 344 GRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFL 403
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N ++D K+G A D +++ + + P +Y+ ++DG K + S +++G MV
Sbjct: 404 NTIMDSLCKEGRVLEAHDFFDQIIH-VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMV 462
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
L P + ++ G+ A +++ + ++ T +L L GR
Sbjct: 463 SIGLRPDNVTYSA--LLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V A + Y I + GI + + Y + LC+ +E + + + + + +
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNI 580
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ G+ + + L SA+L GL+ D+ +++ + ++++ L + +EK
Sbjct: 581 MIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNG 640
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVS 402
+ + T + ++ L + G + A + E + V +S+ V+++S
Sbjct: 641 CTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLIS 688
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 175/432 (40%), Gaps = 13/432 (3%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
D VL KG + + + + M G P V + L+D + A ++ +
Sbjct: 191 DKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDS 250
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGD 127
MVR G +P+ +T+ + G + LL I + ++N++I Y+K
Sbjct: 251 MVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNET 310
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--HFL 185
A EM + +P TY++++D + + E + MV + L P F
Sbjct: 311 LDKAMTAFIEM-RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFT 369
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I L +G+ E + + I ++ +L KEGRV EA +
Sbjct: 370 S----LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQ 425
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
I G+ Y ++ C + + +E LL +V G P + S + C G+
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR 485
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ L + K + ++ + ++ ++ A ++KI L + TY++
Sbjct: 486 VDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNI 545
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+L GL ++ ++EA+R+F ++ + + +F I++ L + + A +L G
Sbjct: 546 VLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSG 605
Query: 425 HKPDEATYKQVI 436
PD Y +I
Sbjct: 606 LVPDAIIYGLMI 617
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/377 (18%), Positives = 152/377 (40%), Gaps = 33/377 (8%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G++ + +L Y+ KG +D ++ +M G N L+ A + + A
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
+ M + G SPN T++ V ILC K G
Sbjct: 315 MTAFIEMRQKGFSPNVVTYTTVIDILC------------------------------KAG 344
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A ++M + L+P T++S++ G + + +++ M+ + + P
Sbjct: 345 RVEDAVSHFSQMVS-EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFL 403
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ L G+ A F + ++ + ++ +G++ E+I++ +
Sbjct: 404 --NTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G+ + Y A +N CK + ++ L R++ + P A+ + + G+
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E ++D G+ L + ++ C N +D+A+ + + + L+V T++++
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581
Query: 367 LDGLFKDGRMEEAVRIF 383
+ GL K GR+ +A +F
Sbjct: 582 IVGLLKVGRIGDAKSLF 598
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 169/418 (40%), Gaps = 73/418 (17%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD- 76
V+ Y G + + + +G P+V + N LL+ L + L ++ +
Sbjct: 176 VIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKF 235
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
G+ PN FT +++ + LC KK D AA L
Sbjct: 236 GIVPNVFTCNILVKALC------------------------------KKNDIDAAIRVLE 265
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM P TY++IL G ++S D V
Sbjct: 266 EM-PAMGFIPNVVTYTTILGG--------------------------YVSKGDMV----- 293
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
A +F D T ++ K+GR +A+++ + E + D
Sbjct: 294 ------GARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDV 347
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + CKE + EV LL D++E+ YIP + R + C +GK + EL +
Sbjct: 348 TYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKL 407
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGR 375
L K D+ S+L+ + C ++ +A L + E KGS+ TY+ L+ G+ + G
Sbjct: 408 LKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFE--KGSIPSTLTYNALIAGMCEGGE 465
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ EA R++D M E V ++ ++ +++ C + R+ ++ +EML G P++ATY
Sbjct: 466 LPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
V LCK++ + +L ++ G+IP + + + KG + +LD+G
Sbjct: 247 LVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRG 306
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D + LM+ YC + A+ + ++E+ + + TY V+++ K+ + E +
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVL 366
Query: 381 RIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ D M E K + SS+ V+ LC ++ A + ++LK PD A +I
Sbjct: 367 NLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLI 423
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G++ + F C+ L++ C ID AI + ++ + +V TY +L G G M A
Sbjct: 236 GIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGA 295
Query: 380 VRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
R+F + + V +++ I++ C A+K DEM + +P++ TY +I
Sbjct: 296 RRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEA 355
Query: 439 F 439
+
Sbjct: 356 Y 356
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 80/205 (39%), Gaps = 40/205 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMR---------VYG------------------------ 42
++++D Y KG FMD ++V M YG
Sbjct: 315 TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLE 374
Query: 43 --FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
++P+ + C ++D L + ++ +A L+ +++ +P+ S + LC+ GK
Sbjct: 375 KKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434
Query: 101 VLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L D I S++ YN +I + G+ A + M + P TY+ ++
Sbjct: 435 ARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE-KGCVPNAFTYNMLIK 493
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLP 181
G + R++ M++ LP
Sbjct: 494 GFCKVGNAREGIRVMEEMLDNGCLP 518
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 105/279 (37%), Gaps = 46/279 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +L Y KG + V+ + G+VP + L+D ++ A + M
Sbjct: 280 TTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEE 339
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
+ V PN T+ ++ + C+ K VL LLD I SS + VID ++G
Sbjct: 340 NRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEG---- 395
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
K EV+ + +++K P + ++
Sbjct: 396 --------------------------------KVEVACELWKKLLKKNCTPDNAITST-- 421
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L GK + A +F EK + T ++ + + G + EA +++ + E+
Sbjct: 422 LIHWLCKEGKVWEARKLFDEF--EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEK 479
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
G Y + CK E ++ ++++ G +P
Sbjct: 480 GCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLP 518
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 183/417 (43%), Gaps = 44/417 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KGL ++ L ++ M G P V++ N ++ ++ ++ A M++ + P+
Sbjct: 317 YCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPD 376
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+++ + CR G LLD + ++ V YN +ID + GD A
Sbjct: 377 IISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKE 436
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M N R + P TY+ +++GA + ++ M+ L P F
Sbjct: 437 DMIN-RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQF------------ 483
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
Y A ++ + K G +A ++ + +G
Sbjct: 484 ----AYTARIVGEL---------------------KLGDTAKAFKLQEEMLTKGFPPDVI 518
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y FVN LCK EE LL+ ++ G++P + + F+ + G +E E+ +
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDM 578
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
L +G + L+ + N ++D A+A +++++ +V TY+VL++G K +M
Sbjct: 579 LSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKM 638
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
++A + F M+E + + ++ I+++ C++ + ++A++ + +ML +PD T+
Sbjct: 639 DQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTH 695
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 207/465 (44%), Gaps = 52/465 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L K L + LEVYRMM YG P V+ N +L + + E++ A L M G
Sbjct: 208 ILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERG 267
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFGAAF 132
P++ T++++ L + G+ + GL+ +G+ S YN +I Y KKG A
Sbjct: 268 CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEAL 327
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND--Y 190
EM R ++P +++++I+ G + K + + + M++K L+P +S N Y
Sbjct: 328 ALWEEMVT-RGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPD-IISYNTLIY 385
Query: 191 VIQKLSDMGKTYAA--EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+L ++G+ + E+ F+ + T ++ L + G ++ A+++ +
Sbjct: 386 GFCRLGNIGEAFILLDELRFR-----NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440
Query: 249 RGITVRDSDYYAFVNVLCKEHQ-----------------PEE------VCGLLR------ 279
RGI Y VN CK P++ + G L+
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500
Query: 280 ------DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+++ +G+ P + + FV C G +E ELL ++ G + D +S M
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ N + + + + + V TY VL+ +GR++ A+ F M+E VV
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ ++ ++++ C ++++ +A K EM + G P++ TY +I+
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILIN 665
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 23/418 (5%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V+ M F+P V CN +L L +N + A +Y M G+ P T++ +
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246
Query: 92 LCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLT 145
C+ G+ + L L+ + G Y S V +N++I+ SKKG+ A + EM G ++
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGL---MVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
P TY+ ++ G Y K + + L MV + + P ++ ++ ++ GK
Sbjct: 307 P--YTYNPLICG---YCKKGLLVEALALWEEMVTRGVSPT--VASHNTIMYGFCKEGKMS 359
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + + ++ + G + EA + + R ++ Y +
Sbjct: 360 DARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLI 419
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LC+ E L D++ RG P + + V C G +E +L GL
Sbjct: 420 DGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLA 479
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D F ++ + KA L ++ DV TY+V ++GL K G +EEA +
Sbjct: 480 PDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGEL 539
Query: 383 FDYM-KELKV---VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M ++ V V+ +SF+ HL+E R+ +ML G P TY +I
Sbjct: 540 LQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFY---DMLSRGQTPTVVTYTVLI 594
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 8/238 (3%)
Query: 209 KRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+RA D ++Q+ C ++ LSK+G +++A + +++ G+ V Y
Sbjct: 254 QRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPL 313
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ CK+ E L ++V RG P + + C +GK + + LS +L K L
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ D ++L+ +C I +A L ++ S ++ TY+ L+DGL + G +E A++
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALK 433
Query: 382 IFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + M + ++ ++V+ C L + A + DEML +G PD+ Y I G
Sbjct: 434 LKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG 491
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
Y ++F++ + C +LK L + + +A+++Y ++ E GI + Y
Sbjct: 183 NYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNT 242
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ CK + + L+ + ERG P + + + KG+ ++ + L+ + G
Sbjct: 243 MLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAG 302
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L + + + L+ YC + +A+AL ++ S VA+++ ++ G K+G+M +A
Sbjct: 303 LRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDAR 362
Query: 381 R--------------------------------IFDYMKELKVVSSS----SFVIVVSRL 404
+ F + EL+ + S ++ ++ L
Sbjct: 363 QQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGL 422
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
C L +L A+K ++M+ G PD TY +++G
Sbjct: 423 CRLGDLETALKLKEDMINRGIHPDVVTYTVLVNG 456
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 116/288 (40%), Gaps = 8/288 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N L+D L R ++ A L M+ G+ P+ T++++ C+ G + D ++
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 111 SSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
+ Y I K GD AF EM + P TY+ ++G + E
Sbjct: 476 VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLT-KGFPPDVITYNVFVNGLCKLGNLE 534
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ ++ M+ +P H ++ ++ + + G IF T
Sbjct: 535 EAGELLQKMIRDGHVPDH-VTYTSFMHAHMEN-GHLREGREIFYDMLSRGQTPTVVTYTV 592
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ A + GR+ A+ + + E+G+ Y +N CK + ++ C ++ E+G
Sbjct: 593 LIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKG 652
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
P + + C GKW+E L + +L K + DS +L++
Sbjct: 653 IFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 8/214 (3%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M GF P V N ++ L + + A L M+RDG P+ T++ +G
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E+ +L G +V+ Y ++I ++ G A EM + + P TY+
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM-QEKGVVPNVITYN 626
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++G + K + + + M EK + P + +I + +MGK A ++ +
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY--TILINENCNMGKWQEALRLYAQML 684
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
++I T G +LK L K+ +V+ I LI
Sbjct: 685 GKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLI 718
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 192/423 (45%), Gaps = 30/423 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G+ D L+++ M G +P V LL +L +I A L G+M
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G P++ T++ LC+ G+ F+ ++ L D G + Y+ +ID + F
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
F M RN++P Y+ ++ G + E + + +M +K +P F +
Sbjct: 331 GFGYYKTMLE-RNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCY--NT 387
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V++ L D G A + + L T M+ L K G V EA+QI+ + E G
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG 447
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-------------CAME-LSRF 296
Y A ++ +E + EE +L +E G P C E L +
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKL 506
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
V C G+ + +LL +++D G++ D ++L+ C R +D A+ L +++ LKG
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ-LKG 565
Query: 357 -SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRK 412
S D TY L+DGL + R +A+ +F + L+ SS S I ++ LC +K+L +
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNI--LQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Query: 413 AMK 415
A+
Sbjct: 624 AIN 626
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 179/452 (39%), Gaps = 57/452 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S A + ++ +S G D ++ + M + P N +L AL I LA
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
LY MV G +PN+ T YN+++D K+G
Sbjct: 192 LALYNRMVAAGCAPNRAT------------------------------YNVLMDGLCKQG 221
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH--- 183
G A +EM + R + P Y+ +L K + + +++G M +K LP
Sbjct: 222 MAGDALKMFDEMLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTY 280
Query: 184 --FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
FLSG L +G+ A D L C++ L + R E
Sbjct: 281 NAFLSG-------LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFG 333
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
Y + ER I+ Y + + + E+ L + ++G++P + + C
Sbjct: 334 YYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLC 393
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + L S +L L+LDS + ++ C +D+A+ + ++ + V
Sbjct: 394 DHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVM 453
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMK--------------ELKVVSSSSFVIVVSRLCHL 407
TY+ L+DG +++GR+EEA +F M+ +V S S +V +C
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQS 513
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ KA K ++ G PD TY +I+G
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 165/407 (40%), Gaps = 23/407 (5%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F +G Y+ M P V ++ I A M + G P+ F ++
Sbjct: 328 FDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNT 387
Query: 88 VAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
V ++LC G E L ++ + S ++I K+G A +EM
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEH 446
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS---GNDYV-------- 191
P TY++++DG R + E + R++ +E P FL G + V
Sbjct: 447 GCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRK 505
Query: 192 -IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ + G+ A + + D + T ++ L K + A++++ + +G
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I+ + Y ++ L + H+ + L +++++ G P + + S C K +
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625
Query: 311 ELLSAVLDK--GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L L K ++S ++ + + +D + IKI++ G + Y + L
Sbjct: 626 NLWLDYLPKKYNFPVESEVLANAHKEI-EDGSLDDGVRELIKIDQEYGYISSNPYTIWLI 684
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
GL + R ++A+RIF ++E + ++ + ++++ LC + L A+
Sbjct: 685 GLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAV 731
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 208/480 (43%), Gaps = 44/480 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYR 59
+I+S E + + ALS V+ Y + L+V++ MR ++G PA+ + N LL+A
Sbjct: 68 LIRSQECKCDEDVALS-VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM- 114
+ L+ GV+PN T++++ ++ C+ +FE G LD G V
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG--ARRYEKT--EVSDRI 170
Y+ VI+ +K G A + +EM R + P + Y+ ++DG + KT E+ DR+
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 171 V------------GLMVE------------------KKLLPKHFLSGNDYVIQKLSDMGK 200
+ +M+ K+ + L +I L D G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
AE +F + K + T ML + G++KE+++++ ++ + +V Y
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ L + + +E + R + +GY F+ C G + ++ V G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
LD + +S+++ C +++++A L ++ K L+ + L+ GL +D R+ EA
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 381 RIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M K + S+ I++ LC + +A EML+ G KPD TY ++ G
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 193/510 (37%), Gaps = 85/510 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S V++ + G D LE++ M G P V+ N L+D ++ + +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 66 ASCLYGAMVRDG-VSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM 114
A L+ ++ D V PN T +++ L + G+ + L + D YSS++
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
+ L G+ A NE+ + R + TY+++L G R K + S + +M
Sbjct: 298 HGLC-----DAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 175 VEK----------------------------KLLPK--------------HFLSGNDYVI 192
K +L+P H L N YV
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 193 QKLSDMGKT---------YAAEMIFKRACDEK----------------IELQDDTCGCML 227
+ L M + YA I C +K +EL C ++
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L ++ R+ EA + + G Y + LCK + E +++++E G+
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P S + C K EL L GL D + L+ CS ++D A+ +
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
+E + ++ TY+ L++G FK G A I+ YM ++ + S+ ++ LC
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + AM+ D+ G P T+ ++
Sbjct: 652 CRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-K 387
++L+ + +Q K +L E + ++ TY+VL+ K E+A D+M K
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
E S+ V++ L +L A++ DEM + G PD Y +I GF+
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 195/433 (45%), Gaps = 18/433 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D E + YGF P + +L L L+ M+
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SG---IYSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L+ SG ++ + N+VI+ K+G
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF LN M +P +Y+++L G R E+ E + ++ MV K P ++ N +
Sbjct: 339 AFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE-VTFNTF 396
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ L G A M+ ++ + E+ T ++ +GRV A+++++ + +
Sbjct: 397 IC-ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 455
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
T+ Y + LC + + LL +++++ P + + V+ C KG E
Sbjct: 456 NTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+ +++ G + ++L++ + ++A+ L + S D+ TY ++ L
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572
Query: 371 FKDGRMEEAVRIFDYMKEL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
++ R+EEA+++F +++L K V + ++ + + C+ A+ M+ G
Sbjct: 573 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD---GAIDFFAYMVSNGCM 629
Query: 427 PDEATYKQVISGF 439
P+E TY +I G
Sbjct: 630 PNELTYITLIEGL 642
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 186/421 (44%), Gaps = 13/421 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+G D V R G V A N L+ R ++ A L +M V+P+ +
Sbjct: 90 RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAY 146
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + + LC G+ L LLD ++ S V Y ++++ K FG A + L+EM
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ TP TY+ I++G R + + + + + P V++ L
Sbjct: 207 -RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV--SYTTVLKGLCAA 263
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ E +F ++ + T +++ + G V+ AIQ+ +S G +
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N +CK+ + ++ L ++ G P + + + C +W++ +ELL ++
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
K + ++ + C I++A L ++ + +++ TY+ L++G GR++
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 379 AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
A+ +F Y K ++ ++ +++ LC+ + L A + EML+ P+ T+ ++S
Sbjct: 444 ALELF-YSMPCK-PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501
Query: 439 F 439
F
Sbjct: 502 F 502
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 136/337 (40%), Gaps = 15/337 (4%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + + ++V++ +G D + M YG P + +L L R
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLV 118
A L MVR PN+ T++ ILC+ G E L++ + V YN +
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
++ + +G +A + M P TY+++L G E+ + + ++ M++K
Sbjct: 432 VNGFCVQGRVDSALELFYSM----PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 179 LLPK--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P F + QK E + + C + T +L ++K+
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL----ITYNTLLDGITKDCNS 543
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+EA+++ H + G++ Y + + VL +E + EE + V + G P A+ ++
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ + C + + + ++ G + + +L+E
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 640
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L+ RG P ++ + + C +G+ + +L A G +D F ++L+
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
YC Q+D A L I + + D TY ++ GL GR+ EA+ + D M
Sbjct: 121 AGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ +++ +C +AM+ DEM G P+ TY +I+G
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 190/429 (44%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++C+S GL V+ + GF P N L+ L + I A + +
Sbjct: 107 TFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKV 166
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIY--SSVMYNLVIDFYSKKGDF 128
V G ++ ++ + LC+ G+ L LL D + ++VMYN++ID K
Sbjct: 167 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 226
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AFD ++M R ++P T +S++ G + + + ++ M+ + + P+ +
Sbjct: 227 NDAFDLYSQMVAKR-ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFS- 284
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ GK A+M+ + I L T ++ + +A I+ ++
Sbjct: 285 -ILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMAS 343
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ Y +N LCK +E L ++ R IP + + + GK
Sbjct: 344 RGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISC 403
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L+ + D+G + +S+++ C N +DKAIAL ++ D+ TY VL+
Sbjct: 404 VLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIK 463
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL + G++E+A ++F D + + + ++ +++ C A+ +M G P
Sbjct: 464 GLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP 523
Query: 428 DEATYKQVI 436
+ TY+ VI
Sbjct: 524 NAKTYEIVI 532
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 179/413 (43%), Gaps = 51/413 (12%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ +G+ Q +A+ ++++D L D ++Y M P CN+L+
Sbjct: 197 LLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFC 256
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLL--DSGIYSSV 113
+++ A L M+ + ++P +T+S++ C+ GK + ++LG+ I V
Sbjct: 257 IMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVV 316
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++D Y + A D + M + R + +Y+++++G K ++ D V L
Sbjct: 317 TYNSLMDGYCLVKEINKAKDIFDSMAS-RGVIANVQSYTTMINGLC---KIKMVDEAVNL 372
Query: 174 MVE---KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
E +K++P V+ T ++ L
Sbjct: 373 FEEMRCRKIIPN--------VV-----------------------------TYNSLIDGL 395
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K G++ +++ + +RG Y + ++ LCK H ++ LL ++ ++G P
Sbjct: 396 GKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDM 455
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + C GK ++ +++ +L KG LD + + +++ +C D A+AL K
Sbjct: 456 YTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSK 515
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR 403
+E + TY++++ LF+ + A ++ M ++ S++ + S+
Sbjct: 516 MEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIYLASK 568
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 177/414 (42%), Gaps = 22/414 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M +G P V N L+++ N + A + +++ G P+ T++ + + LC GK
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L L D I + V Y +I+ K G+ AA L M G N P Y+
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQG-NCQPDVVVYT 213
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
SI+D + + + + MV + + P F + +I L ++ + + +
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS--LIHSLCNLCEWKHVTTLLNQMI 271
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ KI ++ AL KEG++ EA + ++ RG+ Y A ++ C + + +
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 331
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + +V GY P + + + C + + L + K L+ ++ ++LM
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 391
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ C ++ AIAL ++ D+ATY +LLD L K ++EA M LK +
Sbjct: 392 -HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEA------MALLKTI 444
Query: 393 SSSS-------FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ + IV+ +C EL A + G +P+ TY +I+G
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 181/433 (41%), Gaps = 10/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P + L+ L + +I A L+ M
Sbjct: 106 TLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM 165
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G PN T+ + LC+ G + LL S + V+Y +ID K
Sbjct: 166 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 225
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ ++M G+ ++P TY+S++ + + ++ M+ K++P +
Sbjct: 226 TEAFNLFSKMV-GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 284
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L GK A + +E T ++ + + EA++++ +
Sbjct: 285 --VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y +N CK + ++ L ++ ++ IP + + + C G+ ++
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQD 401
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ G + D L++Y C +D+A+AL IE D+ Y +++D
Sbjct: 402 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A IF + + + ++ I+++ LC L +A K EM G P
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 521
Query: 428 DEATYKQVISGFM 440
D TY + G +
Sbjct: 522 DGCTYNTITQGLL 534
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 180/414 (43%), Gaps = 53/414 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L + M P+ N LL ++ + + L M G+ P+ +T +++
Sbjct: 52 DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111
Query: 90 QILCRSGK----FEVVLGLL------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
C + F V+ +L D+ +++++ L ++ K GD FD++
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE--GKIGDALHLFDKMI--- 166
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
G P TY ++++G + T + R++ M + P D V+
Sbjct: 167 -GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP-------DVVV------- 211
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
Y + ++ +L K+ +V EA ++ + +GI+ Y
Sbjct: 212 --YTS---------------------IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYT 248
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ ++ LC + + V LL ++ +P + S V + C +GK E +++ ++ +
Sbjct: 249 SLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 308
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ + ++LM+ +C ++D+A+ + + + +V +Y+ L++G K RM++A
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKA 368
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+F+ M + +++ ++ + CH+ L+ A+ EM+ G PD ATY+
Sbjct: 369 TYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYR 422
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 174/384 (45%), Gaps = 16/384 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R M P V +++D+L + ++ A L+ MV G+SP+ FT++ +
Sbjct: 193 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 252
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC +++ V LL+ I S +M ++ V+D K+G A D ++ M R +
Sbjct: 253 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI-IRGVE 311
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++DG + + + ++ MV P + +S N +I + + A
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP-NVISYNT-LINGYCKIQRMDKAT 369
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F+ C +++ T ++ GR+++AI ++H + G + Y ++ L
Sbjct: 370 YLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 428
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ +E LL+ + P + + C G+ + ++ S + KGL +
Sbjct: 429 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ ++ C +D+A L ++++ S D TY+ + GL ++ +EA+R
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN---KEALRAIQL 545
Query: 386 MKELKV----VSSSSFVIVVSRLC 405
++E+ S+ ++V LC
Sbjct: 546 LQEMLARGFSADVSTTTLLVEMLC 569
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 122/305 (40%), Gaps = 9/305 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S V+D +G + +V MM + G P V NAL+D Q+E+ A ++ MV
Sbjct: 282 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 341
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFG 129
+G +PN +++ + C+ + + L + I ++V YN ++ G
Sbjct: 342 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQ 400
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A +EM P +TY +LD + + + ++ + + P +
Sbjct: 401 DAIALFHEMV-AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD--IQIYT 457
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
VI + G+ AA IF + + T M+ L + G + EA +++ +
Sbjct: 458 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 517
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + Y L + + LL++++ RG+ + V C + V
Sbjct: 518 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSV 577
Query: 310 EELLS 314
+++LS
Sbjct: 578 KQILS 582
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P ++ +R + S ++ V L + + G+ D + + L+ +C ++ A ++
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCH 406
KI KL D AT+ L+ GL +G++ +A+ +FD M E + ++ +++ LC
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ M + +PD Y +I
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSII 216
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 170/374 (45%), Gaps = 8/374 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G ++ ++ R MR +G P ++ + + A L+ M R + P+ T
Sbjct: 325 NGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVT 384
Query: 85 WSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V +C+SGK E+ +L G+ V Y +ID Y K G+ AF N+M
Sbjct: 385 YTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV 444
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ LTP TY+++ DG + + +V++ ++ M K L P + ++ L +G
Sbjct: 445 Q-KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT--IVNGLCKIG 501
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ + T ++ A K G + +A ++ ++ + + +
Sbjct: 502 NIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFN 561
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N C E+ L+ ++E+G +P A + + C K + E+ A+ D+
Sbjct: 562 VLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G++ DS + L++ +C R + +A LH ++ + S+ ATYD L+ G +K + EA
Sbjct: 622 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEA 681
Query: 380 VRIFDYMKELKVVS 393
++F+ M++ +V+
Sbjct: 682 RKLFEEMRKHGLVA 695
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 183/399 (45%), Gaps = 15/399 (3%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS- 107
+CN +L L + ++R A L M G P+ ++ +V CR G+ + VL L+D
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303
Query: 108 ---GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
G+ +YN +I K G+ A L M + P Y++++ G +
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGM-RKWGVFPDNVVYTTVISGFCKLGN 362
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ ++ M KK++P + VI + GK A +F + +E + T
Sbjct: 363 VSAACKLFDEMRRKKIVPD--IVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ K G +KEA +++ + ++G+T Y A + LCK + + LL ++
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+G P + V C G ++ +L+ + G D+ ++LM+ YC ++ K
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK 540
Query: 344 AIALHIKI---EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVI 399
A L ++I ++L+ +L T++VL++G G +E+ R+ ++M E ++ ++++F
Sbjct: 541 AHEL-LRIMLNKRLQPTL--VTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ + C +R + + M G PD TY +I G
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 8/312 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + ++D Y G + V+ M G P V AL D L + EI +
Sbjct: 411 KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDV 470
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVID 120
A+ L M R G+ PN +T++ + LC+ G E + L++ +G Y ++ Y ++D
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G+ A + L M N R L P T++ +++G E +R++ M+EK ++
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKR-LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIM 589
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++++ A I+K D + +T ++K K +KEA
Sbjct: 590 PNA--TTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + E+G +V + Y A + K + E L ++ + G + FV
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVN 707
Query: 301 CGKGKWKEVEEL 312
+G W+ EL
Sbjct: 708 YEEGNWEITLEL 719
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 4/254 (1%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS--KEGRVKEAIQIYHLI 246
D Q L + G A+ +F + + + D+C L LS EG +K A++++
Sbjct: 175 DLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEG-IKIAVKVFEEF 233
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
E G+ ++ LC+ + E LL + +RG P + V+ C G+
Sbjct: 234 PELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL 293
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+V +L+ + KGL D + ++++ C N ++ +A L + K D Y +
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ G K G + A ++FD M+ K+V ++ V+ +C ++ +A + +EML G
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413
Query: 426 KPDEATYKQVISGF 439
+PDE TY +I G+
Sbjct: 414 EPDEVTYTALIDGY 427
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G V EA Q+ + + G+ + Y ++ CK C L ++ + +P
Sbjct: 322 LCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD 381
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + C GK E E+ + +L KGL D ++L++ YC ++ +A ++H
Sbjct: 382 IVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHN 441
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
++ + + +V TY L DGL K+G ++ A + M + + ++ +V+ LC +
Sbjct: 442 QMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIG 501
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + +K +EM G PD TY ++ +
Sbjct: 502 NIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 195/433 (45%), Gaps = 18/433 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D E + YGF P + +L L L+ M+
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SG---IYSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L+ SG ++ + N+VI+ K+G
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 369
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF LN M +P +Y+++L G R E+ E + ++ MV K P ++ N +
Sbjct: 370 AFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE-VTFNTF 427
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ L G A M+ ++ + E+ T ++ +GRV A+++++ + +
Sbjct: 428 IC-ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 486
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
T+ Y + LC + + LL +++++ P + + V+ C KG E
Sbjct: 487 NTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+ +++ G + ++L++ + ++A+ L + S D+ TY ++ L
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 603
Query: 371 FKDGRMEEAVRIFDYMKEL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
++ R+EEA+++F +++L K V + ++ + + C+ A+ M+ G
Sbjct: 604 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD---GAIDFFAYMVSNGCM 660
Query: 427 PDEATYKQVISGF 439
P+E TY +I G
Sbjct: 661 PNELTYITLIEGL 673
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 186/421 (44%), Gaps = 13/421 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+G D V R G V A N L+ R ++ A L +M V+P+ +
Sbjct: 121 RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAY 177
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + + LC G+ L LLD ++ S V Y ++++ K FG A + L+EM
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ TP TY+ I++G R + + + + + P V++ L
Sbjct: 238 -RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV--SYTTVLKGLCAA 294
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ E +F ++ + T +++ + G V+ AIQ+ +S G +
Sbjct: 295 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 354
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N +CK+ + ++ L ++ G P + + + C +W++ +ELL ++
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
K + ++ + C I++A L ++ + +++ TY+ L++G GR++
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474
Query: 379 AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
A+ +F Y K ++ ++ +++ LC+ + L A + EML+ P+ T+ ++S
Sbjct: 475 ALELF-YSMPCK-PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 532
Query: 439 F 439
F
Sbjct: 533 F 533
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 136/337 (40%), Gaps = 15/337 (4%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + + ++V++ +G D + M YG P + +L L R
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 402
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLV 118
A L MVR PN+ T++ ILC+ G E L++ + V YN +
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
++ + +G +A + M P TY+++L G E+ + + ++ M++K
Sbjct: 463 VNGFCVQGRVDSALELFYSM----PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518
Query: 179 LLPK--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P F + QK E + + C + T +L ++K+
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL----ITYNTLLDGITKDCNS 574
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+EA+++ H + G++ Y + + VL +E + EE + V + G P A+ ++
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ + C + + + ++ G + + +L+E
Sbjct: 635 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 671
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L+ RG P ++ + + C +G+ + +L A G +D F ++L+ YC
Sbjct: 96 LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
Q+D A L I + + D TY ++ GL GR+ EA+ + D M S
Sbjct: 156 RYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ +C +AM+ DEM G P+ TY +I+G
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 256
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ + KGL + +E+ M +G P + N LLD + + A L +
Sbjct: 525 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 584
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDF 128
V +GVSP+ T+S + +L R + E + + D G+ +V+YN ++ K+ +
Sbjct: 585 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 644
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
A D M + P TY ++++G
Sbjct: 645 DGAIDFFAYMVSN-GCMPNELTYITLIEG 672
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 181/397 (45%), Gaps = 10/397 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFTWSLVAQILCRSGKFEVVLGLL---- 105
N LL L+ +N+++ A L+ +VR+ + PN+ + V LC+ G + LL
Sbjct: 146 NTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLME 205
Query: 106 -DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
S ++ +Y++VID + K G A LNEM +++ P TYS+++D + +
Sbjct: 206 QGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM-KQKSIPPDIFTYSTLIDALCKLSQW 264
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E + M+ + P + + VI L GK AE I + ++ ++ T
Sbjct: 265 ENVRTLFLEMIHLNIYPN--VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ G+V A +I+ + + I Y +N ++ + +E + R++ ++
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQK 382
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + + G+ K + +L G + D + +L+ Y N +++A
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
++ K+E+ + ++ Y ++DGL K+G++++A F+ + + + ++ ++S
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C L +A +M G D TY ++ GF+
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 175/377 (46%), Gaps = 16/377 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+D + G+ + M+ P + + L+DAL + ++ L+ M+
Sbjct: 217 SIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH 276
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
+ PN T++ V LC+ GK E ++ +++ G+ V+ YN++ID Y +G
Sbjct: 277 LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDR 336
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + + M N +++ P +Y+ +++G R +K + + ++ + +K L P + +
Sbjct: 337 AREIFDSMIN-KSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPS--IVTCNV 393
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKI---ELQDDTCGC-MLKALSKEGRVKEAIQIYHLI 246
++ L ++G+T +A+ F DE + + D C +L K G V+EA+ +H +
Sbjct: 394 LLHGLFELGRTKSAQNFF----DEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
R Y A ++ LCK + ++ + G P + + ++ C +G
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E +++L + D G L D+ + ++ + + ++ + A +I S + AT ++L
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569
Query: 367 LDGLFKDGRMEEAVRIF 383
+D + +D + + F
Sbjct: 570 MDIIAEDPSLLNMIPEF 586
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 178/398 (44%), Gaps = 10/398 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++ L R I A+ L M+ G S + T+ + LCR G+ + L
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332
Query: 105 LDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
L+ ++V+YN +I Y G F A D L P T++ ++DG +
Sbjct: 333 LNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ ++ MV K+ P + +I G+ A I + + L
Sbjct: 393 LVSALELLNEMVAKRFEPN--VITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGY 450
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
C++ AL K+G ++EA+Q++ +S +G + + +N LCK H+ EE L D+
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G I + + V + + ++ +L+ +L +G LD+ + L++ C ++K
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570
Query: 344 AIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVI 399
+ L E++ G + + ++L+ GL + G++ +A++ M + ++
Sbjct: 571 GLGL---FEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNS 627
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+++ LC + +++A +++ G +PD TY +IS
Sbjct: 628 LINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 665
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 184/416 (44%), Gaps = 26/416 (6%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY P + N +LD L + R+A ++ M+ GVSP +T+ +V + LC
Sbjct: 160 MWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLTPG 147
+ + LL + +SV+Y +I + A L +M C P
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE-----PD 274
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
T++ ++ G R + + +++ M+ + G Y++ L MG+ A +
Sbjct: 275 VQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYG--YLMHGLCRMGQVDEARAL 332
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF---VNV 264
+ + L + ++ GR +EA + L + I + D Y F ++
Sbjct: 333 LNKIPNPNTVLYNT----LISGYVASGRFEEAKDL--LYNNMVIAGYEPDAYTFNIMIDG 386
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K+ LL ++V + + P + + + C +G+ +E E+++++ KGL L+
Sbjct: 387 LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF- 383
+ + L+ C + I++A+ L ++ D+ T++ L++GL K+ +MEEA+ ++
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
D E + ++ ++ +V +++A K DEML G D TY +I
Sbjct: 507 DMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKAL 562
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 180/451 (39%), Gaps = 53/451 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF--------- 83
V+ M G P V ++ AL +E+ A L M + G PN
Sbjct: 191 NVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHAL 250
Query: 84 --------------------------TWSLVAQILCRSGKFEVVLGLLDSGIY-----SS 112
T++ V LCR+G+ LLD + +
Sbjct: 251 CENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDA 310
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDR 169
+ Y ++ + G A LN++ N P Y++++ G + R+E E D
Sbjct: 311 LTYGYLMHGLCRMGQVDEARALLNKIPN-----PNTVLYNTLISGYVASGRFE--EAKDL 363
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+ MV P + + +I L G +A + ++ E T ++
Sbjct: 364 LYNNMVIAGYEPDAYTF--NIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K+GR++EA +I + +S +G+++ Y + LCK+ EE L ++ +G P
Sbjct: 422 FCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPD 481
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + C K +E L + +G++ ++ ++L+ + I +A L
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVD 541
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
++ LD TY+ L+ L K G +E+ + +F+ M + + S I++S LC
Sbjct: 542 EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTG 601
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A+K +M+ G PD TY +I+G
Sbjct: 602 KVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 145/333 (43%), Gaps = 30/333 (9%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y M + G+ P N ++D L ++ + A L MV PN T++++ C
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFC 423
Query: 94 RSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G+ E +++S G+ ++V YN +I K G+ A EM +G+ P
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM-SGKGCKPDI 482
Query: 149 STYSSILDGARRYEKTEVS---------DRIVGLMVEKKLLPKHFLSGNDYVIQ--KLSD 197
T++S+++G + K E + + ++ V L FL D + Q KL D
Sbjct: 483 YTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLM-RDSIQQAFKLVD 541
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
EM+F R C L + T ++KAL K G V++ + ++ + +GI
Sbjct: 542 -------EMLF-RGC----PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIIS 589
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
++ LC+ + + L+D++ RG P + + + C G +E L + +
Sbjct: 590 CNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+G+ D+ ++L+ +C + A L K
Sbjct: 650 SEGIRPDAITYNTLISRHCHEGMFNDACLLLYK 682
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 167/384 (43%), Gaps = 44/384 (11%)
Query: 96 GKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G F+V+ LL D G+ + ++ L++ Y K G G A L +M + P F +
Sbjct: 113 GDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKS 172
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG-----------NDYVIQKLSDMG 199
Y+ +LD + V+ + M+ + + P + G D L DM
Sbjct: 173 YNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMA 232
Query: 200 K------TYAAEMIFKRACD-----EKIELQDD-----------TCGCMLKALSKEGRVK 237
K + + + C+ E ++L +D T ++ L + GR+
Sbjct: 233 KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH 292
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA ++ + RG + Y ++ LC+ Q +E LL + + +S +V
Sbjct: 293 EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYV 352
Query: 298 ASQCGKGKWKEVEELL-SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
AS G+++E ++LL + ++ G D++ + +++ + A+ L ++ +
Sbjct: 353 AS----GRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRF 408
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMK 415
+V TY +L++G K GR+EEA I + M + +++ + ++ LC + +A++
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
EM G KPD T+ +I+G
Sbjct: 469 LFGEMSGKGCKPDIYTFNSLINGL 492
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 200/466 (42%), Gaps = 68/466 (14%)
Query: 2 IQSCEGRDSQSDALSLVLD-------------CYSH------KGLFMDGLE-VYRMMRVY 41
+ S EG+ DA+ L+L+ Y+H +G M LE VY M
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+ AL R +++R A + M GV+P++ T++ + Q G E
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 102 LG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPGFSTYSSIL 155
L +L+ G ++ V N++I+ Y K G A + E+ +G P TY++ +
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG--FEPDQITYNTFV 293
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + + +++ +MV++ P F
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVF------------------------------- 322
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ++ L K G+++EA I + + +RG + + + LC ++ EE
Sbjct: 323 ------TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L R V +G P + + + C G L + + G D ++L++
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
CS ++ KA+ L +E TY+ ++DGL K R+EEA +FD M +L+ +S +
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DLQGISRN 495
Query: 396 --SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ LC K++ A ++M+ G +P+ TY +++ +
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHY 541
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 175/432 (40%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++++ Y G D L + GF P N ++ L + + + A + M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
V++G P+ FT+++V LC++G+ E G+L D G + +N +I
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D L + ++P T++ +++ + ++ R+ M P
Sbjct: 373 EEALD-LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY-- 429
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L +GK A + K T ++ L K+ R++EA +++ +
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI+ + ++ LCK+ + ++ GL+ ++ G P + + + C +G K+
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++L + G +DV TY L++
Sbjct: 550 AADILETMTANGF-----------------------------------EVDVVTYGTLIN 574
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR + A+++ M+ + + ++ V+ L +R A+ EM ++G P
Sbjct: 575 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634
Query: 428 DEATYKQVISGF 439
D TYK V G
Sbjct: 635 DALTYKIVFRGL 646
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V R MR+ G P A N +L +L+R+N IR A L+ M G P+ T+ +V +
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 91 ILCRSG-----KFEVVLGLLDSG 108
LCR G F+ +L ++D G
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKG 667
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 203/476 (42%), Gaps = 48/476 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVS----------------- 48
EG S S++++ + G LE Y+ M V G P+V
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 49 -----------------ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
CN +L L +Q + A+ L M G+ PN +++ V
Sbjct: 428 ALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 92 LCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
CR + V +L+ G+ ++ Y+++ID + D A + +N M + N+
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS-NIEV 546
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y +I++G + +T + ++ M+E+K L +S N +I G+ +A
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS-IIDGFFKEGEMDSAVA 605
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
++ C I T ++ L K R+ +A+++ + +G+ + Y A ++ C
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K E L +++E G P + ++ G +L +L GL D
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L++ + + A L+ +++ + D Y V+++GL K G+ + V++F+ M
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 387 KELKVVSSSSFVIVVSRLC--HLKE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
K+ V + V++ + + H +E L +A + HDEML G PD AT+ ++SG
Sbjct: 786 KKNNVTPN---VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 173/420 (41%), Gaps = 46/420 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ L ++ M G P + L++ + E+ A Y M G++P+ F
Sbjct: 355 LVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHT 414
Query: 88 VAQILCRSGKFEVVLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+ Q + K E L L D +G+ + + N ++ + K+G A + L++M R
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM-ESRG 473
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+ P +Y++++ G R + +++ + ++EK L P N+Y L D
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP------NNYTYSILID------ 521
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
GC + + A+++ + ++ I V Y +N
Sbjct: 522 --------------------GCF-----RNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 264 VLCKEHQPEEVCGLLRDVVE--RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
LCK Q + LL +++E R + C M + + +G+ + G+
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSC-MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ +SLM C N ++D+A+ + +++ LD+ Y L+DG K ME A
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 382 IFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+F + E + S + ++S +L + A+ + +MLK G + D TY +I G +
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 110/518 (21%), Positives = 191/518 (36%), Gaps = 96/518 (18%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S A + +L+ YS +++ M +P N L AL ++N + A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDF 121
LY MV GV + T L+ + R K L +L I S++Y+L +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI---------LDGARRYEKTEVSDRIVG 172
K D A L EM + P TY+S+ +D A R + +SD I
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
+V L ND V +A ++F + E T +++ K
Sbjct: 338 NVVAATSLITGHCKNNDLV-----------SALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386
Query: 233 EGRVKEAIQIYHLISERGITVR-------------------------DSDYYAFVNV--- 264
G +++A++ Y + G+T +S NV
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC 446
Query: 265 ------LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
LCK+ + +E LL + RG P + + + C + + S +L+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 319 KGLLLDSFCCS-----------------------------------SLMEYYCSNRQIDK 343
KGL +++ S +++ C Q K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 344 AIALHIK-IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A L IE+ + + +Y+ ++DG FK+G M+ AV ++ M + + ++ ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC + +A++ DEM G K D Y +I GF
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 137/334 (41%), Gaps = 24/334 (7%)
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY-SSILDGARR----------- 160
V + L+ S +G A D L + N TP S S ++D A+
Sbjct: 108 VFWVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFN 167
Query: 161 -----YEKTEVSDR---IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
Y K +D IV M+E ++P F + + L A+ ++ R
Sbjct: 168 YLLNAYSKDRQTDHAVDIVNQMLELDVIP--FFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ + T +++A +E + EA+++ ERG Y V CK
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 273 EVCGLLRDVVERGY-IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
LLR++ E+ +P + + + +G + L +L G+ ++ +SL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ +C N + A+ L K+EK S + T+ VL++ K+G ME+A+ + M+ L +
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 392 VSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMG 424
S V ++ ++ +A+K DE + G
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 153/406 (37%), Gaps = 79/406 (19%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L +G + E+ M G P V + N ++ RQ + LA ++ ++ G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 78 VSPNKFTWSL-----------------------------------VAQILCRSGKFEVVL 102
+ PN +T+S+ + LC+ G+
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 103 GLLDSGI------YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL + I S + YN +ID + K+G+ +A EMC G ++P TY+S+++
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC-GNGISPNVITYTSLMN 627
Query: 157 G----ARRYEKTEVSDR-------------------------------IVGLMVEKKLLP 181
G R + E+ D + ++E+ L P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +I ++G AA ++K+ + + T ++ L K+G + A +
Sbjct: 688 SQPIY--NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+Y + G+ + Y VN L K+ Q +V + ++ + P + + +A
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+G E L +LDKG+L D L+ N Q +A +L
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 187/436 (42%), Gaps = 55/436 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
VL+ +GLF LE Y + + P N ++ A+ R + A ++ +
Sbjct: 138 VLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIP 197
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFG 129
+P+ +T+S + LC+ + + + LLD G + + V +N++I KKGD G
Sbjct: 198 LRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLG 257
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A ++ M + P TY++++ G K E + ++ MV K +P
Sbjct: 258 RAAKLVDNMF-LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVP-------- 308
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
D T G ++ +GR + ++ + R
Sbjct: 309 -----------------------------NDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + Y + ++ LCKE + + L +++V +G P + S + C +GK E
Sbjct: 340 GHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEA 399
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LS + +KG L +SF SSLM Y KAI + ++ + Y +L++G
Sbjct: 400 RGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILING 459
Query: 370 LFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L KDG+ EA+ ++ M +L VV+ SS ++ C+ + + +K ++ML G
Sbjct: 460 LCKDGKFMEALMVWKQMLSRGIKLDVVAYSS---MIHGFCNANLVEQGLKLFNQMLCQGP 516
Query: 426 --KPDEATYKQVISGF 439
+PD TY +++ F
Sbjct: 517 VVQPDVITYNILLNAF 532
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 178/424 (41%), Gaps = 39/424 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG A ++++ KG ++ M + G VP NAL+ L + ++
Sbjct: 234 EGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEK 293
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG------IYSSVMY 115
A L MV + PN T+ + G+ V++ L G +YSS++
Sbjct: 294 AVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLIS 353
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
L K+G F A + EM G+ P YS+++DG R K + + + M
Sbjct: 354 GLC-----KEGKFNQAMELWKEMV-GKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEG 234
K LP F + +++ + G ++ A +++K + + ++ C ++ L K+G
Sbjct: 408 NKGYLPNSFTYSS--LMRGYFEAGDSHKAILVWKEMANNNC-IHNEVCYSILINGLCKDG 464
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI--PCAME 292
+ EA+ ++ + RGI + Y + ++ C + E+ L ++ +G + P +
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVIT 524
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + + C + ++L+ +LD+G D C I L E
Sbjct: 525 YNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCD---------------IFLKTLRE 569
Query: 353 KLKGSLDVATY-DVLLDGLFKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKEL 410
+ D + D L+ L K R A +I + M + + +S++ +VV ++C K +
Sbjct: 570 NMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNV 629
Query: 411 RKAM 414
RKA+
Sbjct: 630 RKAI 633
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 226 MLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M KA K ++A+ ++H + E + + +NV+ +E VV
Sbjct: 102 MFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVAS 161
Query: 285 GYI---PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ P A+ + + + C G + E+ + + D++ S+LM C +I
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVI 399
D+A++L +++ ++ ++VL+ L K G + A ++ D M LK V + ++
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMF-LKGCVPNEVTYNA 280
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+V LC +L KA+ ++M+ P++ T+ +I+GF+
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFV 321
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 190/407 (46%), Gaps = 13/407 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG--VSPNKFTWSLVAQILCRSGKFE 99
G P++ C+ L++AL ++ +A ++G M RDG V+P+ T++ + + LCR+G+ +
Sbjct: 170 GASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKALCRAGEID 228
Query: 100 VVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+L SGI +V+ YN+++D K G AF M GR + P T+ +
Sbjct: 229 AAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR-VRPSIVTFGIL 287
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ G R ++ ++ M + P + + +I G A +F +
Sbjct: 288 ISGLARGQQFGEVGAVLQEMQGFGITPNEVIY--NEMIGWHCRKGHCSEALKLFDEMVSK 345
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV-LCKEHQPEE 273
I+ T + KAL KEG ++ A +I + G+ V S + + V L + +
Sbjct: 346 GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDL 405
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
V L+R+++ R P ++ + C GK +E E+ VL KGL ++ ++L+
Sbjct: 406 VLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIH 465
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + +A + + LD TY++++ G K +M+EA+++ D M +
Sbjct: 466 GLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKP 525
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F I + C+L ++ + + D+M G KPD TY +I G+
Sbjct: 526 DLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 193/477 (40%), Gaps = 76/477 (15%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
+R G P V N L+DAL + + A L G MV V P+ T+ ++ L R +
Sbjct: 237 LRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQ 296
Query: 98 FEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
F V +L GI + V+YN +I ++ +KG A +EM + + + TY+
Sbjct: 297 FGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVS-KGIKQTVVTYN 355
Query: 153 SILDGARRYEKTEVSDRIV------GLMVEKKLLPK------------------------ 182
I + + E +++I+ G+MV L
Sbjct: 356 LIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLA 415
Query: 183 HFLSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
FL ND + IQ+L GK A I+ + + + + T ++ L + +KE
Sbjct: 416 RFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKE 475
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++ + G+ + Y + CK + +E L D+++RG+ P + F+
Sbjct: 476 ATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLH 535
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C GK +E+ LL + +GL D ++++ YC + + KA ++ K
Sbjct: 536 TYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRP 595
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMK-------------------------ELKVVS 393
+ Y+ L+ G ++G + +A+ I D MK E+K V
Sbjct: 596 NAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVF 655
Query: 394 SS-----------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + I++ C + ++ +A+ EM G P++ TY ++ +
Sbjct: 656 AQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY 712
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 146/356 (41%), Gaps = 8/356 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ E++ + G V+ NAL+ L + N ++ A+ + AMV GV ++ T++++
Sbjct: 440 EAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMI 499
Query: 90 QILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
Q C++ K + + L D I +N+ + Y G L++M L
Sbjct: 500 QGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM-KSEGL 558
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY +I+DG + + ++ + +++ L P + + +I G A
Sbjct: 559 KPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIY--NALIGGYGRNGNISDA 616
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
I I+ T ++ + G V+E ++ + I + Y +
Sbjct: 617 IGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQG 676
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CK + +E +++ RG P M + + + G +E +L ++ G++ D
Sbjct: 677 FCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPD 736
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
S ++L+ +C +DK + ++ D +Y+ +DG+ +EAV
Sbjct: 737 SVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAV 792
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 198/459 (43%), Gaps = 45/459 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G F + + R G +P+V A N +L L + ++ A ++ M +D +PN
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APN 376
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LCR+GK + L DS G++ +V N+++D K A
Sbjct: 377 LSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFE 436
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + + TP T+ S++DG + + + + +I M++ + + +I+
Sbjct: 437 QM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTS--LIKNFF 493
Query: 197 DMGKTYAAEMIFK----RACDEKIELQDDTCGCMLKA----------------------- 229
+ G+ I+K + C ++L + CM KA
Sbjct: 494 NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553
Query: 230 --------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
L K G E ++++ + E+G + Y ++ CK + + LL ++
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G+ P + + + E L K + L+ SSL++ + +I
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
D+A + ++ + + +V T++ LLD L K + EA+ F MKELK + ++ I+
Sbjct: 674 DEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC +++ KA EM K G KP +Y +ISG
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 161/378 (42%), Gaps = 9/378 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL+ + ++H G DG ++Y+ M P + N +D +++ E ++ +
Sbjct: 487 SLIKNFFNH-GRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKS 545
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGA 130
P+ ++S++ L ++G +E+ + + G + + YN+VID + K G
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A+ L EM + P TY S++DG + ++ + + + K++ + +
Sbjct: 606 AYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS-- 662
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +G+ A +I + + + T +L AL K + EA+ + + E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
T Y +N LCK + + +++ ++G P + + ++ G E
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L G + DS C ++++E + + A +L + + + T VLLD L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842
Query: 371 FKDGRMEEAVRIFDYMKE 388
K+ +E+A + ++E
Sbjct: 843 HKNDCLEQAAIVGAVLRE 860
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 132/296 (44%), Gaps = 6/296 (2%)
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYVIQKLSDMGKTYAA 204
P FS Y++++ +++ + M E P H + +I+ + G+ +A
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT---LIRGFAKEGRVDSA 222
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ ++ + + K G+V A + +H I G+ + Y + + V
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK ++ +E + + + +PC + + GK+ E LL KG +
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++ ++D+A+ + +++K + +++TY++L+D L + G+++ A + D
Sbjct: 343 VIAYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRD 401
Query: 385 YMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M++ + + V I+V RLC ++L +A ++M PDE T+ +I G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+TC M+ + K +++E + + + S Y + + + + L +
Sbjct: 134 NTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKE----VEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ E GY P + + +G+ ++E+ S+ LD ++L + C S +
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV-- 251
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
++D A +IE D TY ++ L K R++EAV +F+++++ + V +
Sbjct: 252 --GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 190/419 (45%), Gaps = 51/419 (12%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQ-NEIRLASC------LYGAMVRDGVSPNKFTW 85
+++ M YG + +V +CN + L + I++A L M G+ PN +T+
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTY 226
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ V +LC++GK V+ ++ GI V+Y +ID + K G+ +A+ +EM
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM-Q 285
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R ++P F TY++++ G + + +D++ MV K+L P
Sbjct: 286 KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV---------------- 329
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
TY A L D C KEG++KEA +++ + + G+T Y A
Sbjct: 330 TYTA-------------LIDGYC--------KEGKMKEAFSLHNQMLQMGLTPNIVTYTA 368
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK + + LL ++ +G + V C G + +L+ + G
Sbjct: 369 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D+ ++LM+ YC +R++ +A L ++ + V T++VL++G G +E+
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 488
Query: 381 RIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ +M E ++ +++++ ++ + C +R + + M G PD TY +I G
Sbjct: 489 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 547
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 158/376 (42%), Gaps = 14/376 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + V R M G P L+D + + A L+ M + +SP+ T+
Sbjct: 237 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 296
Query: 86 SLVAQILCRSGKF--------EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ V LC++G+ E+V L+ V Y +ID Y K+G AF N+
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEMVCKRLEP---DEVTYTALIDGYCKEGKMKEAFSLHNQ 353
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M LTP TY+++ DG + + + ++ ++ M K L + + ++ L
Sbjct: 354 MLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS--LVNGLCK 410
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G A + K T ++ A K + A ++ + +R +
Sbjct: 411 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 470
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ +N C E+ LL+ ++E+G +P A + + C + + E+ +
Sbjct: 471 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 530
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG++ D + L++ +C R + +A LH + +L V++Y+ L+ G +K +
Sbjct: 531 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 590
Query: 378 EAVRIFDYMKELKVVS 393
EA +F+ M+ +V+
Sbjct: 591 EARELFEQMRREGLVA 606
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 5/300 (1%)
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ L P TY+ ++ + K ++R++ M+ + + P + +I +G
Sbjct: 217 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT--LIDGFCKLGNV 274
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+A +F KI T ++ L + GRV EA +++H + + + + Y A
Sbjct: 275 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 334
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ CKE + +E L +++ G P + + C G+ ELL + KGL
Sbjct: 335 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 394
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L+ + +SL+ C ID+A+ L +E D TY L+D K M A
Sbjct: 395 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 454
Query: 382 IFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M +EL+ + +F ++++ C L K ML+ G P+ TY +I +
Sbjct: 455 LLRQMLDRELQ-PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 140/325 (43%), Gaps = 8/325 (2%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+ + + ++D Y +G + ++ M G P + AL D L + E+
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVI 119
A+ L M R G+ N +T++ + LC++G + + L+ +G + +V Y ++
Sbjct: 381 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D Y K + A + L +M + R L P T++ +++G E ++++ M+EK +
Sbjct: 441 DAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P + + +I++ A I++ C + + +T ++K K +KEA
Sbjct: 500 MPNA--TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + +G + S Y A + K + E L + G + + F
Sbjct: 558 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 617
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLD 324
+GK + EL ++K L+ D
Sbjct: 618 NYDEGKMELTLELCDEAIEKCLVGD 642
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 195/413 (47%), Gaps = 12/413 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+ +++ G + CN L++ + ++ LAS G +++ G P+ FT++ + C
Sbjct: 95 KHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLG 154
Query: 96 GKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ E + +++ GI V +Y +ID K G A N+M N + P
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMEN-YGIRPDVVM 213
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+S+++G + +D ++ M+++K+ P + + +I GK A+ ++
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD--VITFNALIDAFVKEGKLLDAKELYNE 271
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
I T ++ L EGR+ EA Q+++L+ +G Y + +N CK +
Sbjct: 272 MIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 331
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E+ + ++ ++G + + + GK +E+ ++ +G+ + +
Sbjct: 332 VEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNV 391
Query: 331 LMEYYCSNRQIDKAIALHIKIEK--LKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
L+ C N +++KA+ + ++K + G ++ TY+VLL GL +G++E+A+ +F M+
Sbjct: 392 LLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQ 451
Query: 388 ELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + ++ I++ +C +++ A+ + G KP+ TY +ISG
Sbjct: 452 KRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL 504
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 153/367 (41%), Gaps = 11/367 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + + M G P V ++D+L + + A L+ M G+ P+ ++ +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC SG++ ++ G++ I V+ +N +ID + K+G A + NEM ++
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ-MSI 277
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY+S+++G + + + ++ LM K P + +I K A
Sbjct: 278 APNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD--VVAYTSLINGFCKCKKVEDA 335
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
IF + + T +++ G+ A +++ + RG+ Y ++
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHC 395
Query: 265 LCKEHQPEEVCGLLRDVVER---GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
LC + + + D+ +R G P + + C GK ++ + + + +
Sbjct: 396 LCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDM 455
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ + +++ C ++ A+ L + +V TY ++ GLF++G M EA
Sbjct: 456 DIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHV 515
Query: 382 IFDYMKE 388
+F MKE
Sbjct: 516 LFRKMKE 522
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA---FVNVLCKEHQPEEVCGLLRDVV 282
+L ++K + I + + G++ +D Y +N C+ QP L ++
Sbjct: 77 LLNVIAKMKKFDVVINLCKHLQIMGVS---NDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
+ G+ P + + C + +E +++ +++ G+ D +++++ C N +D
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A++L ++E DV Y L++GL GR +A + M + K+ +F ++
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L A + ++EM++M P+ TY +I+G
Sbjct: 254 DAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
Q E L +VE +P ++ +R + K+ V L + G+ D + C+
Sbjct: 51 QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
LM +C + Q A + K+ KL D+ T+ L++G R+EEA+ + + M E+
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170
Query: 390 KVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ LC + A+ ++M G +PD Y +++G
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V NAL+DA ++ ++ A LY M++ ++PN FT++ + LC G+ + +
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
Query: 105 L----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
G + V+ Y +I+ + K A EM + LT TY++++ G
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQ-KGLTGNTITYTTLIQGFG 362
Query: 160 RYEKTEVSDRIVGLMVEKKLLPK--------HFLSGNDYVIQKL---SDM---------- 198
K V+ + G MV + + P H L N V + L DM
Sbjct: 363 LVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP 422
Query: 199 ---------------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
GK A M+F +++ T +++ + K G+VK+A+ ++
Sbjct: 423 NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLF 482
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ +G+ Y ++ L +E E L R + E G
Sbjct: 483 CSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 11/212 (5%)
Query: 235 RVKEAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV----VERGYIPC 289
+ EA+ ++ H++ R + D+ +NV+ K + + V L + + V C
Sbjct: 51 QFNEALDLFSHMVESRPLP-SIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTC 109
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ ++ F C + L ++ G D F +SL+ +C +I++A+++
Sbjct: 110 NLLMNCF----CQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVN 165
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLK 408
++ ++ DV Y ++D L K+G ++ A+ +F+ M+ + + +V+ LC+
Sbjct: 166 QMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSG 225
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
R A M+K KPD T+ +I F+
Sbjct: 226 RWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 182/431 (42%), Gaps = 9/431 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L +++D Y G + +V MM G P CN LL L R + + L L G M
Sbjct: 176 LDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFME 235
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFG 129
G+ P+ +T+S + C++ F+ + + + V YN++I + G
Sbjct: 236 GAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 295
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF EM + L+P TY ++++G + + + + ++ M L P + G
Sbjct: 296 EAFGFKEEMVD-YGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT- 353
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ GKT A I K ++ +++ L K G++ A ++ + +
Sbjct: 354 -LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y + ++H + LL ++ G +P + C G+ KE
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LL ++ +GL ++F + L+ + I A K+ K D+ Y+ L+ G
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L GRMEEA + +++ +V ++ ++ C L KA + +ML G KP+
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592
Query: 429 EATYKQVISGF 439
TY ++ G+
Sbjct: 593 ADTYTDLLEGY 603
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 192/441 (43%), Gaps = 40/441 (9%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M++V G P N L+ ++Q++ A L M G+ PN +++ ++ LC++G
Sbjct: 409 MIKV-GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNG 467
Query: 97 KFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + LL+ I ++ MY +I +SK+G+ A + L +M N+ P Y
Sbjct: 468 ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA-NVHPDLFCY 526
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL----------SGN----DYVIQKLSD 197
+S++ G + E ++ + ++ L+P F +GN D +++++ +
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586
Query: 198 MG-----KTYA--AEMIFKRACDEKIE--LQ----------DDTCGCMLKALSKEGRVKE 238
G TY E FK EK+ LQ + G +++ LS+ ++
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 646
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + + + G+ Y + ++ LCK E+ GLL ++ + G P + + +
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID 706
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G + ++L KGL+ + ++L++ C N I A L+ ++ +
Sbjct: 707 GFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAP 766
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
D Y+VL G +E+A+ + + M + S F +V C +L++ K
Sbjct: 767 DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLH 826
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M+ P+ T ++V+S F
Sbjct: 827 VMMDREIVPNAQTVEKVVSEF 847
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 142/329 (43%), Gaps = 4/329 (1%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
S+ + ++++D Y K G A + M + L P + +L R + E+ ++
Sbjct: 172 STAVLDVLVDTYKKTGSVRNAAQVVLMMAD-LGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
G M +LP + I+ AA+ +F+ + + T M+ L
Sbjct: 231 KGFMEGAGILPDVYTYST--FIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 288
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+ G V+EA + + G++ Y A +N LCK + +E LL ++ G P
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI 348
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ V +GK E ++L ++ G+ + +L+ C Q+ +A L +
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ K+ D TY+ L+ G F+ + A + + M+ ++ + S+ I+++ LC E
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++A +EM+ G KP+ Y +I G
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIG 497
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 142/331 (42%), Gaps = 11/331 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E Y ++ G VP + L+ + + A L M+ G+ PN T++ + +
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGY 603
Query: 93 CRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+S +E V +L S + S + +Y +VI S+ + AF L E+ L P
Sbjct: 604 FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV-EKNGLVPD 662
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
YSS++ G + E + ++ M ++ L P + + +I G A +
Sbjct: 663 LHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG--IVCYNALIDGFCRSGDISRARNV 720
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F + + T ++ K G + +A +Y + +RGI D+ Y + C
Sbjct: 721 FDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI-APDAFVYNVLATGCS 779
Query: 268 EHQP-EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ E+ L ++ RGY ++ + V C +GK +E E+LL ++D+ ++ ++
Sbjct: 780 DAADLEQALFLTEEMFNRGYANVSL-FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQ 838
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
++ + ++ +A + ++++ K S
Sbjct: 839 TVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 40/212 (18%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC--GLLRDVVERGYIPC 289
K G V+ A Q+ ++++ G+ P C GLL+D++
Sbjct: 185 KTGSVRNAAQVVLMMADLGLA------------------PTRRCCNGLLKDLLRAD---- 222
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
AMEL WK L + G+L D + S+ +E +C R D A +
Sbjct: 223 AMEL-----------LWK----LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFE 267
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
++ + +++ TY+V++ GL + G +EEA + M + + + ++ +++ LC
Sbjct: 268 EMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGS 327
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
L++A DEM G KP+ Y ++ GFM
Sbjct: 328 RLKEAKALLDEMSCSGLKPNIVVYGTLVDGFM 359
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G V+ + G VP AL+D + +I A LY M+ G
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
++P+ F ++++A + E L L + G + ++N ++ + K+G
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEK 823
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
L+ M + R + P T ++ + K + R+ + +KK
Sbjct: 824 LLHVMMD-REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKK 867
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 190/442 (42%), Gaps = 10/442 (2%)
Query: 5 CEGRDSQSD-ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
C+G + + + ++V+ G D ++++ M VP N ++D ++ ++
Sbjct: 180 CDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDL 239
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLV 118
L+ M+R G+ PN T++++ LCR+G+ +LD + Y+++
Sbjct: 240 ESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSIL 299
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
D +S+ GD E + + G T S +L+G + K ++ ++ +V
Sbjct: 300 FDGHSRTGDSQTMLSLFEESVK-KGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSG 358
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
LL + + +I +G A IF++ I T ++ L K R+ E
Sbjct: 359 LLQTTVIY--NTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITE 416
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + + + G+ + ++ + Q E+ +L D+ E+G P + V
Sbjct: 417 AHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C GK E +L + K +L + +++++ Y D+A L K++
Sbjct: 477 AFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPP 536
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
+ TY++L+ GL K ++ EA + D ++ + S+ ++S C+ +A++
Sbjct: 537 SIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELE 596
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM K G KP TY+ + S
Sbjct: 597 KEMWKCGIKPSPRTYRMLFSSL 618
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 10/361 (2%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---- 98
VP + L D R + + L+ V+ GV +T S++ LC+ GK
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348
Query: 99 EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
EV+ L++SG+ ++V+YN +I+ Y + GD AF +M R + P TY+++++G
Sbjct: 349 EVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM-KSRLIRPDHITYNALING 407
Query: 158 ARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ E+ TE D ++ + EK + + N +I G+ +I ++ +
Sbjct: 408 LGKVERITEAHDLVIEM--EKNGVNPSVETFNT-LIDAYGRAGQLEKCFIILSDMQEKGL 464
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ + G ++ A K G++ EA+ I + + + Y A ++ + ++
Sbjct: 465 KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + G P + + + C + + E EELL ++ + GL D ++L+ C
Sbjct: 525 LAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACC 584
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
D+A+ L ++ K TY +L L GR+ E ++ M + VV S
Sbjct: 585 YRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSG 644
Query: 397 F 397
Sbjct: 645 I 645
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 5/240 (2%)
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A M+ + CD + ++ L K G +A++++ + E+ + Y +
Sbjct: 171 AVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMI 230
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ K+ E L ++ G P + + ++ C G+ E +L + + ++
Sbjct: 231 DGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMV 290
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY--DVLLDGLFKDGRMEEAV 380
D F S L + + +R D L + E +K + + Y +LL+GL KDG++ +A
Sbjct: 291 PDGFTYSILFDGH--SRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348
Query: 381 RIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ + +++ C + +L A +M +PD TY +I+G
Sbjct: 349 EVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 110/294 (37%), Gaps = 43/294 (14%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P+V N L+DA R ++ + M G+ PN ++ + C++GK
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483
Query: 98 FEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ +LD V+ YN +ID Y + G AF L E + P TY+
Sbjct: 484 ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF-MLAEKMKSSGVPPSIVTYN 542
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++ G + + ++ ++ + L P +S N T + ++
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPD-VISYN------------TLISACCYRSNT 589
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D +EL+ + C GI Y + L +
Sbjct: 590 DRALELEKEMWKC------------------------GIKPSPRTYRMLFSSLGGAGRVH 625
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
E+ L + ++++ +PC+ + V + G+ +VE L + DKG+ + +
Sbjct: 626 EMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDY 679
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 197/439 (44%), Gaps = 15/439 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIR 64
EG + L++ Y GL + M+ VY P+ + N +LD L N
Sbjct: 133 EGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPS 192
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVI 119
+AS ++ M+ GVSPN +T+ LV + LC + + LL + +S++Y +I
Sbjct: 193 VASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLI 252
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D SK+ A L EM P +T+++++ G R + ++V M+ K
Sbjct: 253 DALSKRDRVDEALKLLEEMFL-MGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGF 311
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P G Y++ L + A+ + + + + +T ++ + GR+ EA
Sbjct: 312 TPNDMTYG--YLMHGLCKTCRIDEAQALLSKVPGPNV-VHFNT---LVNGFVRNGRLNEA 365
Query: 240 IQ-IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
+Y + G + VN LCK+ L+ D+ +G P + +
Sbjct: 366 TAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILID 425
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C KG+ +E +L +L KG L++ ++L+ C + +I +A+ + ++
Sbjct: 426 GFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKP 485
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNH 417
D+ T++ L+ GL + ME+A+ ++ D + E + +S +F ++ E+++A+K
Sbjct: 486 DIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLV 545
Query: 418 DEMLKMGHKPDEATYKQVI 436
++ML G DE TY +I
Sbjct: 546 NDMLFRGCPLDEITYNGLI 564
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 192/424 (45%), Gaps = 10/424 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D S + + L++ M + G P V+ N ++ R N + + L M+ G
Sbjct: 251 LIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG 310
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+PN T+ + LC++ + + LL +V+ +N +++ + + G A +
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVY 370
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+ P T+S++++G + + +V M K P L+ +I
Sbjct: 371 DKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPN--LNTYTILIDGFC 428
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G+ A +I + + L ++ AL K G++ EA+ ++ +S +G
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ + + LC+ + E+ L RD+V G I ++ + + + +G+ +E +L++ +
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
L +G LD + L++ C ++K + L ++ + + + T ++L++G G++
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608
Query: 377 EEAVRIFDYMKELKVVSSSSFVI----VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
A+ ++M+++ S ++ +++ LC +++A+ +++ G +PD TY
Sbjct: 609 HNAL---EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITY 665
Query: 433 KQVI 436
+I
Sbjct: 666 NTLI 669
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 154/345 (44%), Gaps = 17/345 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASC-LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P V N L++ R + A+ +Y M+ +G P+ FT+S + LC+ G F L
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 104 LLD----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST----YSSI 154
L++ G ++ Y ++ID + KKG A L EM LT GFS Y+++
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM-----LTKGFSLNTVGYNAL 458
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ ++ K + + G M K P F + +I L + + A +++ E
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS--LIFGLCRVDEMEDALALYRDMVLE 516
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T ++ A + G ++EA+++ + + RG + + Y + LCK E+
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
GL +++ +G P + + + C GK E + ++ +G D +SL+
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
C +I +A+ L K++ D TY+ L+ L ++G ++A
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA 681
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 14/291 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++D + KG + + R M GF NAL+ AL + +I
Sbjct: 411 KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHE 470
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMYNLVID 120
A ++G M G P+ FT++ + LCR + E L L L+ I +SV +N +I
Sbjct: 471 ALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIH 530
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL---MVEK 177
+ ++G+ A +N+M R TY+ ++ + KT ++ +GL M+ K
Sbjct: 531 AFLRRGEIQEALKLVNDML-FRGCPLDEITYNGLI---KALCKTGAVEKGLGLFEEMIRK 586
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
L P + +I GK + A + T ++ L K GR++
Sbjct: 587 GLTPSIITC--NILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
EA+ ++ + GI Y + LC+E ++ C LL VE G++P
Sbjct: 645 EALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVP 695
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 18/324 (5%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY M G+VP V + L++ L ++ A L M G PN T++++ C
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 94 RSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G+ E ++ +L G ++V YN +I K G A D EM + + P
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM-SSKGCKPDI 487
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA---- 204
T++S++ G R ++ E + + MV + ++ + +I G+ A
Sbjct: 488 FTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTF--NTLIHAFLRRGEIQEALKLV 545
Query: 205 -EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+M+F R C L + T ++KAL K G V++ + ++ + +G+T +N
Sbjct: 546 NDMLF-RGC----PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILIN 600
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C + +RD++ RG+ P + + + C +G+ +E L + +G+
Sbjct: 601 GFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQP 660
Query: 324 DSFCCSSLMEYYCSNRQIDKAIAL 347
DS ++L+ + C D A L
Sbjct: 661 DSITYNTLICWLCREGAFDDACFL 684
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 146/364 (40%), Gaps = 35/364 (9%)
Query: 109 IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
++ ++ L++ +Y + G G A L +M P F +Y+ +LD V+
Sbjct: 136 VFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVAS 195
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+ M+ K + P + G V++ L + + A ++ + ++
Sbjct: 196 NVFYDMLSKGVSPNDYTFG--LVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLID 253
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
ALSK RV EA+++ + G + + + C+ ++ E L+ ++ +G+ P
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAV-------------------------------- 316
M + C + E + LLS V
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
++ G + D F S+L+ C A+ L ++ ++ TY +L+DG K G++
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433
Query: 377 EEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
EEA I + + + +++ + ++S LC ++ +A+ EM G KPD T+ +
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493
Query: 436 ISGF 439
I G
Sbjct: 494 IFGL 497
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ + G + LE R M GF P + N+L++ L ++ I+ A L+ +
Sbjct: 596 NILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQA 655
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGD 127
+G+ P+ T++ + LCR G F+ LL G+ + V +N+++ + K+ +
Sbjct: 656 EGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 195/439 (44%), Gaps = 11/439 (2%)
Query: 6 EGRDSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
E + Q D +++++C+ H G V + GF P L+ L ++
Sbjct: 91 ELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKV 150
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--GIY---SSVMYNLV 118
R A + ++ G ++ ++ + LC++G+ L +L G+ + VMYN +
Sbjct: 151 REALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTI 210
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID K A D +EM R + P TY++++ G + + + + M+ K
Sbjct: 211 IDSLCKDKLVIHASDLCSEMIVKR-IFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P + + ++ L G+ A + + ++ T ++ + +
Sbjct: 270 IKPDVYTF--NILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A +++ ++ RG+T Y +N LCK +E L +++ + P + + +
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G+ + +L++ + ++G D SSL++ C N Q+DKAI L KI+
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNH 417
++ TY +L+DGL K+GR+++A ++ D + + + + ++V+ LC +A+
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLV 507
Query: 418 DEMLKMGHKPDEATYKQVI 436
+M G PD TY+ ++
Sbjct: 508 SKMEDNGCIPDAVTYETLV 526
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 158/361 (43%), Gaps = 8/361 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+V R + P V N ++D+L + + AS L M+ + P+ T++ +
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
G+ + +GL + + ++ +N+++D K+G+ A + L M + +
Sbjct: 248 GCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIK-QGVD 306
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
TY+S++DG ++ + + M + + P + +I L A
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPD--VQSYSIMINGLCKTKMVDEAV 364
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+FK + + T ++ L K GR+ +A + + + RG Y + ++ L
Sbjct: 365 NLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK HQ ++ L+ + ++G P + V C G+ K+ + + +L KG LD
Sbjct: 425 CKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDV 484
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ ++ C D+A++L K+E D TY+ L+ LF++ + ++AV++
Sbjct: 485 KMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLRE 544
Query: 386 M 386
M
Sbjct: 545 M 545
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 43/287 (14%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---- 106
N+L+D + + A+ ++ M R GV+P+ ++S++ LC++ + + L
Sbjct: 313 NSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHS 372
Query: 107 -SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
S ++V YN +ID K G A+D +NEM N R TYSS+LD + +
Sbjct: 373 KSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN-RGQPADVITYSSLLDALCKNHQV- 430
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D+ + L+ + K D+ I+ T
Sbjct: 431 --DKAITLITKIK----------------------------------DQGIQPNIYTYTI 454
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L K GR+K+A +Y + +G + Y VN LCKE +E L+ + + G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
IP A+ V + K + +LL ++ +G + S S+ M
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSM 561
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 1/218 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G ++ L K G + A+Q+ I + Y ++ LCK+ L +++
Sbjct: 173 GTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIV 232
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+ P + + + G+ KE L + +L K + D + + L++ C ++ K
Sbjct: 233 KRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKK 292
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVS 402
A + + K ++ TY+ L+DG F + +A +F+ M V S+ I+++
Sbjct: 293 ARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMIN 352
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC K + +A+ EM P+ TY +I G +
Sbjct: 353 GLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL 390
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 189/411 (45%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L +Y M+ + ++ + LL AL A L+ M R + T++++ +
Sbjct: 442 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 497
Query: 92 LCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LC +GK L LL ++V YN VI + +G AA D + EM + P T
Sbjct: 498 LCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 557
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
Y +++ G + + + + ++ M+ K ++ P+ + + +I D GK A +
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRD 615
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R + + + T ++ AL +GR EA ++ + +G+ Y +N CKE
Sbjct: 616 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 675
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
++ + ++ RG + + + + KG+ +E ++L + +G+ D +
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 735
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ + ++ ID+A + ++EK + + D TY+ L+ GL GR++EA ++ D M E
Sbjct: 736 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 795
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++S +++ A++ +EM+ G P TY +I G
Sbjct: 796 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 846
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 145/339 (42%), Gaps = 25/339 (7%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++PN++T+ V C+ G+ + + + D + +VMYN +I Y +G
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 129 GAAF---DRLNEMCNGRNLTPGFSTYSSI-----LDGARRYEKTEVSDRIVGLMVEKKLL 180
A DR+ E R + +TY+ + +DG R E E+ + + G K L
Sbjct: 608 DTALLYRDRMVE----RGVAMTVATYNLLVHALFMDG-RGTEAYELVEEMGG----KGLA 658
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + +I G A IF+ + T ++ ALSK+G+V+E
Sbjct: 659 PDVFTY--NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ RGI Y A +N + ++ ++ ++ P + + +
Sbjct: 717 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ E +L+ + ++G+ D ++L+ Y + A+ + ++ + +
Sbjct: 777 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 836
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
TY+ L+ GL K+G+ ++A + M E + S I
Sbjct: 837 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 875
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 13/255 (5%)
Query: 26 GLFMDG--LEVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
LFMDG E Y + M G P V N L++ ++ ++ A ++ M R GV
Sbjct: 635 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 694
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRL 135
T++ + L + G+ + L D + V+YN +I+ +S G+ AF+ +
Sbjct: 695 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 754
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
EM R + P TY++++ G + + + +++ M E+ + P L + +I
Sbjct: 755 GEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD--LVTYNTLISGY 811
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
S G A I ++ T +++ L K G+ +A + + E GIT D
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871
Query: 256 SDYYAFVNVLCKEHQ 270
S Y + + L E +
Sbjct: 872 STYISLIEGLTTEDE 886
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 139/322 (43%), Gaps = 9/322 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V+ + G + ++V+ M G V P NAL+ Q ++ A MV
Sbjct: 561 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 620
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
GV+ T++L+ L G+ +E+V + G+ V YN++I+ + K+G+ A
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M R + TY++++ + + + +D++ V + + P L + +
Sbjct: 681 LEIFENMSR-RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY--NAL 737
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I S G A I ++I D T +++ L GRV EA ++ ++ERGI
Sbjct: 738 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 797
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ + ++ + +++ +G+ P + + + C G+ + E
Sbjct: 798 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 857
Query: 312 LLSAVLDKGLLLDSFCCSSLME 333
++ +++ G+ D SL+E
Sbjct: 858 MVKEMVENGITPDDSTYISLIE 879
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 185/426 (43%), Gaps = 75/426 (17%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG 108
+L +L + + LA L+ M++ GV +++ ++ + C S + GL+ G
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228
Query: 109 I-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ S+V YN+++ K A + N M N +T TY +++ G R E+ E++
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN-IGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 168 DRIVGLMVEKKLLP--------------KHFLSGNDYVIQKLSDMG---KTYA------- 203
RI M+ +P K + + KL D+G +A
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 204 ---------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
A+ +FK +E + T ++ AL K G +++A+ ++ + ++GI V
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + +N CK+ + GLL +V+ G P A S +A C G EL
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ ++G+ +++ ++L+ +C ++++D
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMD-------------------------------- 495
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
EA R+FD M + V+ + +F +++ C + +RKA + +D+M++MG KPD TY+
Sbjct: 496 ---EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552
Query: 434 QVISGF 439
+ISG
Sbjct: 553 SLISGL 558
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 202/483 (41%), Gaps = 69/483 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ +G+ D L ++ MR G V N+L++ +Q + A
Sbjct: 368 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA 427
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDF 121
L MV++G++P ++S + LCR+G E+ + + GI +++ + +I+
Sbjct: 428 RGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALING 487
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ K A ++M + N+ P T++ +++G + ++ MVE L P
Sbjct: 488 FCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 546
Query: 182 KHFL-----------SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
++ SG + ++D+ +YA L + + +L
Sbjct: 547 DNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-------------LNNFSLTALLYGF 593
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG----- 285
+EGR E ++ ++ RG+ + + V K+H E+ C L R++ E+G
Sbjct: 594 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 653
Query: 286 ------------------------------YIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y P + + + + C G E L
Sbjct: 654 IFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDG 374
+L +L + F + ++Y+ + ++KA LH + L+G L + ++++L+ GL K G
Sbjct: 714 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAG 771
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+++EA+ + + E S+ ++ LC + ++ KA + +EML G KPD Y
Sbjct: 772 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831
Query: 434 QVI 436
I
Sbjct: 832 IFI 834
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 177/415 (42%), Gaps = 51/415 (12%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+R+ GFVP+ + C+ ++D L ++ + A L + G+ PN F ++ + LC
Sbjct: 291 THDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349
Query: 94 RSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNEMCNGRNLT 145
++ +F+ L G+ + V Y ++I K+G D FD++ + +
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+S+++G Y K DR GL LSG V + L+ +Y+
Sbjct: 410 P----YNSLING---YCKQGSLDRARGL-----------LSG--MVKEGLTPTAASYSP- 448
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ L + G + ++++ ++ERGI + + A +N
Sbjct: 449 --------------------LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGF 488
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + +E L +++ IP + + + C G ++ +L +++ GL D+
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ SL+ C + KA +E L+ + LL G F++GR E ++D
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 608
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M V + SF I+V + K+ EM + G KPD+ Y +I
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 174/408 (42%), Gaps = 17/408 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V A NAL+D L + A L+ M G+ PN+ T++++ LC+ G E
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L D GI +V YN +I+ Y K+G A L+ M LTP ++YS ++
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK-EGLTPTAASYSPLIA 451
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRAC 212
G R + + M + + + ++ N+Y L + K A +F +
Sbjct: 452 GLCR------NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + + T M++ G +++A Q+Y + E G+ + Y + ++ LC
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + D+ + L+ + +G++ E L + +G+ LD + ++
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+K+ L ++++ D Y ++D L K+ M +A+ +D M +
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 685
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + ++++ LC L A EML P++ TY + F
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 143/365 (39%), Gaps = 40/365 (10%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW-SLVAQILCRSG---KFE 99
+P N +++ IR A LY MV G+ P+ +T+ SL++ + SG E
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 100 VVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
V L +S + ++ ++ + ++G F + +EM R + +++ I+ A
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV-RGVKLDLVSFTIIVYAA 628
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHF--------LSGNDYVIQKLS-------------- 196
+ E S + M E+ + P LS + +IQ L+
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNT 688
Query: 197 -----------DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
G +AE++ K + T C L + EG +++A + H
Sbjct: 689 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HS 747
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+G + + LCK + +E L+ + E G+ P + S + C G
Sbjct: 748 AMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 807
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ EL + +L KGL D + + + + + DKA+ ++ + + + TY
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRA 867
Query: 366 LLDGL 370
LL G+
Sbjct: 868 LLSGI 872
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 189/411 (45%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L +Y M+ + ++ + LL AL A L+ M R + T++++ +
Sbjct: 68 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 123
Query: 92 LCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LC +GK L LL ++V YN VI + +G AA D + EM + P T
Sbjct: 124 LCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 183
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
Y +++ G + + + + ++ M+ K ++ P+ + + +I D GK A +
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRD 241
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R + + + T ++ AL +GR EA ++ + +G+ Y +N CKE
Sbjct: 242 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 301
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
++ + ++ RG + + + + KG+ +E ++L + +G+ D +
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 361
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ + ++ ID+A + ++EK + + D TY+ L+ GL GR++EA ++ D M E
Sbjct: 362 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 421
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++S +++ A++ +EM+ G P TY +I G
Sbjct: 422 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 472
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 145/339 (42%), Gaps = 25/339 (7%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++PN++T+ V C+ G+ + + + D + +VMYN +I Y +G
Sbjct: 174 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 233
Query: 129 GAAF---DRLNEMCNGRNLTPGFSTYSSI-----LDGARRYEKTEVSDRIVGLMVEKKLL 180
A DR+ E R + +TY+ + +DG R E E+ + + G K L
Sbjct: 234 DTALLYRDRMVE----RGVAMTVATYNLLVHALFMDG-RGTEAYELVEEMGG----KGLA 284
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + +I G A IF+ + T ++ ALSK+G+V+E
Sbjct: 285 PDVFTY--NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ RGI Y A +N + ++ ++ ++ P + + +
Sbjct: 343 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 402
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ E +L+ + ++G+ D ++L+ Y + A+ + ++ + +
Sbjct: 403 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 462
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
TY+ L+ GL K+G+ ++A + M E + S I
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 501
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 13/255 (5%)
Query: 26 GLFMDG--LEVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
LFMDG E Y + M G P V N L++ ++ ++ A ++ M R GV
Sbjct: 261 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 320
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRL 135
T++ + L + G+ + L D + V+YN +I+ +S G+ AF+ +
Sbjct: 321 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 380
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
EM R + P TY++++ G + + + +++ M E+ + P L + +I
Sbjct: 381 GEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD--LVTYNTLISGY 437
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
S G A I ++ T +++ L K G+ +A + + E GIT D
Sbjct: 438 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 497
Query: 256 SDYYAFVNVLCKEHQ 270
S Y + + L E +
Sbjct: 498 STYISLIEGLTTEDE 512
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 143/333 (42%), Gaps = 11/333 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V+ + G + ++V+ M G V P NAL+ Q ++ A MV
Sbjct: 187 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 246
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
GV+ T++L+ L G+ +E+V + G+ V YN++I+ + K+G+ A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M R + TY++++ + + + +D++ V + + P L + +
Sbjct: 307 LEIFENMSR-RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY--NAL 363
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I S G A I ++I D T +++ L GRV EA ++ ++ERGI
Sbjct: 364 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 423
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ + ++ + +++ +G+ P + + + C G+ + E
Sbjct: 424 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 483
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCS--NRQID 342
++ +++ G+ D SL+E + R ID
Sbjct: 484 MVKEMVENGITPDDSTYISLIEGLTTEDERAID 516
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 185/426 (43%), Gaps = 75/426 (17%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG 108
+L +L + + LA L+ M++ GV +++ ++ + C S + GL+ G
Sbjct: 192 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 251
Query: 109 I-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ S+V YN+++ K A + N M N +T TY +++ G R E+ E++
Sbjct: 252 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN-IGVTADEVTYRTLVYGFCRMEELEMA 310
Query: 168 DRIVGLMVEKKLLP--------------KHFLSGNDYVIQKLSDMG---KTYA------- 203
RI M+ +P K + + KL D+G +A
Sbjct: 311 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 370
Query: 204 ---------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
A+ +FK +E + T ++ AL K G +++A+ ++ + ++GI V
Sbjct: 371 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 430
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + +N CK+ + GLL +V+ G P A S +A C G EL
Sbjct: 431 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 490
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ ++G+ +++ ++L+ +C ++++D
Sbjct: 491 EMAERGIAWNNYTFTALINGFCKDKKMD-------------------------------- 518
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
EA R+FD M + V+ + +F +++ C + +RKA + +D+M++MG KPD TY+
Sbjct: 519 ---EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 575
Query: 434 QVISGF 439
+ISG
Sbjct: 576 SLISGL 581
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 201/483 (41%), Gaps = 69/483 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ +G+ D L ++ MR G V N+L++ +Q + A
Sbjct: 391 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA 450
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDF 121
L MV++G++P ++S + LCR+G + L + GI +++ + +I+
Sbjct: 451 RGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALING 510
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ K A ++M + N+ P T++ +++G + ++ MVE L P
Sbjct: 511 FCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 569
Query: 182 KHFL-----------SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
++ SG + ++D+ +YA L + + +L
Sbjct: 570 DNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-------------LNNFSLTALLYGF 616
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG----- 285
+EGR E ++ ++ RG+ + + V K+H E+ C L R++ E+G
Sbjct: 617 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 676
Query: 286 ------------------------------YIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y P + + + + C G E L
Sbjct: 677 IFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 736
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDG 374
+L +L + F + ++Y+ + ++KA LH + L+G L + ++++L+ GL K G
Sbjct: 737 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAG 794
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+++EA+ + + E S+ ++ LC + ++ KA + +EML G KPD Y
Sbjct: 795 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 854
Query: 434 QVI 436
I
Sbjct: 855 IFI 857
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 180/424 (42%), Gaps = 69/424 (16%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+R+ GFVP+ + C+ ++D L ++ + A L + G+ PN F ++ + LC
Sbjct: 314 THDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 372
Query: 94 RSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNEMCNGRNLT 145
++ +F+ + + G+ + V Y ++I K+G D FD++ + +
Sbjct: 373 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+S+++G Y K DR GL LSG V + L+ +Y+
Sbjct: 433 P----YNSLING---YCKQGSLDRARGL-----------LSG--MVKEGLTPTAASYSP- 471
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ L + G + ++++ ++ERGI + + A +N
Sbjct: 472 --------------------LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGF 511
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + +E L +++ IP + + + C G ++ +L +++ GL D+
Sbjct: 512 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 571
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ SL+ C + KA +E L+ + LL G F++GR E ++D
Sbjct: 572 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 631
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD---------EMLKMGHKPDEATYKQV 435
M V + SF I+V A+K HD EM + G KPD+ Y +
Sbjct: 632 MAVRGVKLDLVSFTIIV---------YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 682
Query: 436 ISGF 439
I
Sbjct: 683 IDAL 686
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 174/408 (42%), Gaps = 17/408 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V A NAL+D L + A L+ M G+ PN+ T++++ LC+ G E
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L D GI +V YN +I+ Y K+G A L+ M LTP ++YS ++
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK-EGLTPTAASYSPLIA 474
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRAC 212
G R + + M + + + ++ N+Y L + K A +F +
Sbjct: 475 GLCR------NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + + T M++ G +++A Q+Y + E G+ + Y + ++ LC
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + D+ + L+ + +G++ E L + +G+ LD + ++
Sbjct: 589 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 648
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+K+ L ++++ D Y ++D L K+ M +A+ +D M +
Sbjct: 649 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 708
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + ++++ LC L A EML P++ TY + F
Sbjct: 709 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 756
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 143/365 (39%), Gaps = 40/365 (10%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW-SLVAQILCRSG---KFE 99
+P N +++ IR A LY MV G+ P+ +T+ SL++ + SG E
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592
Query: 100 VVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
V L +S + ++ ++ + ++G F + +EM R + +++ I+ A
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV-RGVKLDLVSFTIIVYAA 651
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHF--------LSGNDYVIQKLS-------------- 196
+ E S + M E+ + P LS + +IQ L+
Sbjct: 652 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNT 711
Query: 197 -----------DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
G +AE++ K + T C L + EG +++A + H
Sbjct: 712 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HS 770
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+G + + LCK + +E L+ + E G+ P + S + C G
Sbjct: 771 AMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 830
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ EL + +L KGL D + + + + + DKA+ ++ + + + TY
Sbjct: 831 INKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRA 890
Query: 366 LLDGL 370
LL G+
Sbjct: 891 LLSGI 895
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 179/407 (43%), Gaps = 17/407 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EV+R M P V + N L+ R E++ A Y M V+P+ ++S + +
Sbjct: 248 EVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF 307
Query: 93 CRSGKFEVV---------LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
R G+ + LGL+ G V+Y +VI + + G A +EM G
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDG----VIYTMVIGGFCRAGSMSEALRVRDEMV-GFG 362
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY+++L+G + + +++++ M E+ + P L +I G
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPD--LCTFTTLIHGYCRQGNFEN 420
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A +F +++ T ++ + ++G + +A +++ + R I Y ++
Sbjct: 421 ALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILID 480
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C++ Q E+ G L ++V++G +P + + C G K+ ++ L + +
Sbjct: 481 SHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFP 540
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D ++L+ Y + A + +EK D TY+++++G + G M++A R+F
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVF 600
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
M + + +++ +++ ++A + HDEM+ G PD+
Sbjct: 601 KGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 198/454 (43%), Gaps = 41/454 (9%)
Query: 9 DSQSDALSLVLDCYSH-KGLFMDGLE-VYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
DS+ +A +L + +S+ K L DG + V M P V N L+DA +R ++ A
Sbjct: 152 DSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
L +M G+ P T++ V + LC+ +F+ + + SV +N++I
Sbjct: 212 IALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ + G+ A EM + R +TP ++S ++ R + + + + M L+P
Sbjct: 272 FCRVGEVKEAVKFYKEMQH-RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG-----------CMLKAL 230
D VI + G A M E + ++D+ G +L L
Sbjct: 331 -------DGVIYTMVIGGFCRAGSM------SEALRVRDEMVGFGCLPDVVTYNTLLNGL 377
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K+ R+ +A ++ + + ERG+T + ++ C++ E L ++ + P
Sbjct: 378 CKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDV 437
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + + C KG + EL + + +L + S L++ +C Q++ A +
Sbjct: 438 VTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDE 497
Query: 351 IEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH--L 407
+ K KG+L ++ TY+ ++ G + G +++ + M++ V +I + L H +
Sbjct: 498 MVK-KGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD---LITFNTLIHGYI 553
Query: 408 KE--LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KE + A + M K +PD TY +I+GF
Sbjct: 554 KEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 132/316 (41%), Gaps = 12/316 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ + G + L V M +G +P V N LL+ L +Q+ + A L M
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE 395
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
GV+P+ T++ + CR G FE L L D+ + V YN +ID +KGD
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL--MVEKKLLPKHFLSGN 188
A + ++M + R + P TYS ++D EK +V D L MV+K LP +
Sbjct: 456 ANELWDDM-HAREILPNHITYSILIDS--HCEKGQVEDAFGFLDEMVKKGNLPN--IRTY 510
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I+ G + ++ + + T ++ KE + A +++++ +
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y +N ++ ++ + + + + G P + G K+
Sbjct: 571 EMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQ 630
Query: 309 VEELLSAVLDKGLLLD 324
+L ++ +G D
Sbjct: 631 AFQLHDEMIHRGFAPD 646
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I+ + K A F+ D ++ + +L LS+ G A + Y L+
Sbjct: 91 DLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLS 150
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
V V+ CK + + ++ ++ +R P + + + ++ G
Sbjct: 151 SDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDA 210
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L+ ++ ++GL +S+++ C +R+ DKA + +++ + DV ++++L+
Sbjct: 211 AIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + G ++EAV+ + M+ V SF ++ E+ A EM +G P
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 428 DEATYKQVISGF 439
D Y VI GF
Sbjct: 331 DGVIYTMVIGGF 342
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 189/411 (45%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L +Y M+ + ++ + LL AL A L+ M R + T++++ +
Sbjct: 437 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 492
Query: 92 LCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LC +GK L LL ++V YN VI + +G AA D + EM + P T
Sbjct: 493 LCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 552
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
Y +++ G + + + + ++ M+ K ++ P+ + + +I D GK A +
Sbjct: 553 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRD 610
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R + + + T ++ AL +GR EA ++ + +G+ Y +N CKE
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 670
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
++ + ++ RG + + + + KG+ +E ++L + +G+ D +
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 730
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ + ++ ID+A + ++EK + + D TY+ L+ GL GR++EA ++ D M E
Sbjct: 731 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 790
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++S +++ A++ +EM+ G P TY +I G
Sbjct: 791 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 841
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 145/339 (42%), Gaps = 25/339 (7%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++PN++T+ V C+ G+ + + + D + +VMYN +I Y +G
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 129 GAAF---DRLNEMCNGRNLTPGFSTYSSI-----LDGARRYEKTEVSDRIVGLMVEKKLL 180
A DR+ E R + +TY+ + +DG R E E+ + + G K L
Sbjct: 603 DTALLYRDRMVE----RGVAMTVATYNLLVHALFMDG-RGTEAYELVEEMGG----KGLA 653
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + +I G A IF+ + T ++ ALSK+G+V+E
Sbjct: 654 PDVFTY--NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ RGI Y A +N + ++ ++ ++ P + + +
Sbjct: 712 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 771
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ E +L+ + ++G+ D ++L+ Y + A+ + ++ + +
Sbjct: 772 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 831
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
TY+ L+ GL K+G+ ++A + M E + S I
Sbjct: 832 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 870
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 13/255 (5%)
Query: 26 GLFMDG--LEVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
LFMDG E Y + M G P V N L++ ++ ++ A ++ M R GV
Sbjct: 630 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 689
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRL 135
T++ + L + G+ + L D + V+YN +I+ +S G+ AF+ +
Sbjct: 690 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 749
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
EM R + P TY++++ G + + + +++ M E+ + P L + +I
Sbjct: 750 GEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD--LVTYNTLISGY 806
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
S G A I ++ T +++ L K G+ +A + + E GIT D
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866
Query: 256 SDYYAFVNVLCKEHQ 270
S Y + + L E +
Sbjct: 867 STYISLIEGLTTEDE 881
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 143/333 (42%), Gaps = 11/333 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V+ + G + ++V+ M G V P NAL+ Q ++ A MV
Sbjct: 556 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 615
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
GV+ T++L+ L G+ +E+V + G+ V YN++I+ + K+G+ A
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M R + TY++++ + + + +D++ V + + P L + +
Sbjct: 676 LEIFENMSR-RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY--NAL 732
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I S G A I ++I D T +++ L GRV EA ++ ++ERGI
Sbjct: 733 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 792
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ + ++ + +++ +G+ P + + + C G+ + E
Sbjct: 793 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 852
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCS--NRQID 342
++ +++ G+ D SL+E + R ID
Sbjct: 853 MVKEMVENGITPDDSTYISLIEGLTTEDERAID 885
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 192/432 (44%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G G V + G+ P+ N L+ L + +++ A + +
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSSV--MYNLVIDFYSKKGDF 128
+ G N+ +++ + +C+ G + LL D + MY+ +ID K
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 463
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM + ++ TYS+++ G K + + ++ MV K + P +
Sbjct: 464 SEAYGLFSEM-TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPD--VRTY 520
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L GK A+ + ++ T ++ VK+A +++ +S
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N CK +E L +++ ++ +P + S V C G+
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L+ + D+G D +SL++ C N +DKAIAL K++ + T+ +LLD
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLD 700
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++A +F D + + + + +++ C L +A+ +M + G P
Sbjct: 701 GLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIP 760
Query: 428 DEATYKQVISGF 439
+ T+ +I+
Sbjct: 761 NAVTFDIIINAL 772
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 169/410 (41%), Gaps = 28/410 (6%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++DAL + + A L+ M G+S N T+S + C GK + LGL
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSSILD 156
L+ + ++ YN+++D K+G A L M C N+ TYS+++D
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVI----TYSTLMD 246
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
G + + + + M + P + + N + K D EMI R
Sbjct: 247 GYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-P 305
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I+ +L + +K A+ + H + +GI +N C Q
Sbjct: 306 PIIQFNK-----ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+L +++RGY P + L+ + C KG+ K+ +L +G L+ ++L+
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C AI L KI+ +V Y ++D L K + EA +F E+ V
Sbjct: 421 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS---EMTVKG 477
Query: 394 SSSFVIVVSRL----CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ V+ S L C + +L++A+ +EM+ PD TY ++
Sbjct: 478 ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 180/426 (42%), Gaps = 37/426 (8%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
+ L+D + E++ A ++ AM GV+P+ +++++ C+ + + L L I
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL 301
Query: 111 SS----VMYNLVIDFYSKKGDFGAAFD-------------------RLNEMCNGRNLTPG 147
S + +N ++D ++K + A +N C+ +T G
Sbjct: 302 SRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFG 361
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLLPKHF-LSGNDY--VIQK 194
FS + IL ++ I GL ++ KLL + F L+ Y +I
Sbjct: 362 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 421
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ +G T A + ++ + + ++ AL K V EA ++ ++ +GI+
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + C + +E GLL ++V + P + V + +GK KE + +L+
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+L + D F ++LM Y ++ KA + + + + DV TY +L++G K
Sbjct: 542 VMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++EA+ +F M + +V + ++ +V LC + DEM G D TY
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYN 661
Query: 434 QVISGF 439
+I G
Sbjct: 662 SLIDGL 667
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 178/420 (42%), Gaps = 10/420 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L + +M + P V N L+DAL ++ +++ A + M++ V N T+
Sbjct: 182 GKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITY 241
Query: 86 SLVAQ---ILCRSGKFEVVLGLLD-SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
S + ++ K + V + G+ V YN++I+ + K A + EM
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL 301
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R P ++ ILD + + + + + K + P F + +I MG+
Sbjct: 302 SR--FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL--NILINCFCHMGQ 357
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ + T ++K L +G+VK+A+ + + +G + Y
Sbjct: 358 ITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYAT 417
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N +CK LLR + R P S + + C E L S + KG
Sbjct: 418 LINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 477
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D S+L+ +C ++ +AI L ++ + DV TY +L+D L K+G+++EA
Sbjct: 478 ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAK 537
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + V ++ +++ + E++KA + M MG PD TY +I+GF
Sbjct: 538 SVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 597
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 151/350 (43%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + ++DAL + + A L+ M G+S + T+S + C GK + +GL
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ Y +++D K+G A L M + P TY+++++G
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA-CVKPDVFTYNTLMNGYL 563
Query: 160 RYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + + M + P + + N + K+ D EM K + +
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTV 623
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR+ + + +RG Y + ++ LCK ++
Sbjct: 624 -----TYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIA 678
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++G P + + C G+ K+ +E+ +L KG LD + + ++ +C
Sbjct: 679 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHC 738
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+++A+ + K+E+ + T+D++++ LFK ++A ++ M
Sbjct: 739 KQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 8/283 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ---ILCRSGKFEVV 101
P V L+DAL ++ +++ A + M++ V P+ FT++ + ++ K + V
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574
Query: 102 LGLLD-SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ G+ V Y ++I+ + K A + EM + +N+ P TYSS++DG
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM-HQKNMVPDTVTYSSLVDGLC 633
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + ++ M ++ P ++ N +I L G A +F + D+ I
Sbjct: 634 KSGRISYVWDLIDEMRDRGQ-PADVITYNS-LIDGLCKNGHLDKAIALFNKMKDQGIRPN 691
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L K GR+K+A +++ + +G + Y + CK+ EE +L
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ E G IP A+ + + K + + E+LL ++ +GLL
Sbjct: 752 KMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 121/285 (42%), Gaps = 37/285 (12%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + +G T AA + F R D ++ + + ++ AL K V EA ++ ++ +
Sbjct: 104 LINGVCRIGDTRAA-IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK 162
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GI+ Y + C + +E GLL +V + P + V + C +GK KE
Sbjct: 163 GISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEA 222
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ +L+ +L + + S+LM+ Y ++ KA + + + + DV +Y+++++G
Sbjct: 223 KSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282
Query: 370 LFKDGRMEEAVRIFDYM---------------------------------KELKVVSSSS 396
K R+++A+ +F M ELK +
Sbjct: 283 FCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 342
Query: 397 FV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F I+++ CH+ ++ ++LK G+ P T +I G
Sbjct: 343 FTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGL 387
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 117/276 (42%), Gaps = 5/276 (1%)
Query: 168 DRIVGLMVEKKLLPKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
D V L V K+L + + + +I+ L G+ A + + +L +
Sbjct: 43 DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYA 102
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ + + G + AI+ I R Y ++ LCK E GL ++ +
Sbjct: 103 TLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK 162
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G + S + C GK KE LL+ ++ K + + + L++ C ++ +A
Sbjct: 163 GISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEA 222
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
++ + K +V TY L+DG F +++A +F+ M + V S+ I+++
Sbjct: 223 KSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C +K + KA+ EM+ + P + +++ F
Sbjct: 283 FCKIKRVDKALNLFKEMI-LSRFPPIIQFNKILDSF 317
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 49/403 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV---V 101
P V L+ +L A L M G+ PN T++++ LC KFE +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 102 LG-LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LG +L+ G+ +V+ YN +I+ Y K+G A D + E+ R L+P TY+ ++ G
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNELIKG-- 437
Query: 160 RYEKTEVSDR--IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
Y K+ V ++ M+E+K+LP D V TY +
Sbjct: 438 -YCKSNVHKAMGVLNKMLERKVLP-------DVV---------TYNS------------- 467
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
L D C + G A ++ L+++RG+ Y + ++ LCK + EE C L
Sbjct: 468 LIDGQC--------RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ ++G P + + + C GK E +L +L K L +S ++L+ C+
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSS 396
+ ++ +A L K+ K+ V+T +L+ L KDG + A F M + +
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + C L A +M + G PD TY +I G+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 217/517 (41%), Gaps = 82/517 (15%)
Query: 1 MIQSCEGRDSQSDALSLV------------------LDCYSHKGLFMDGLEVYRMMRVYG 42
+I+S G + +S+AL+LV +D + F E+ M G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
+P V NAL++ ++ I A + M +SPN T++ + + C+S + +
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKA-M 447
Query: 103 GLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
G+L+ + V+ YN +ID + G+F +A+ RL + N R L P TY+S++D
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY-RLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ ++ E + + + +K + P + +I GK A ++ ++ +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMY--TALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ L +G++KEA + + + G+ S ++ L K+ +
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ ++ G P A + F+ + C +G+ + E++++ + + G+ D F SSL++ Y
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 338 NRQIDKAI------------------------ALHIKIEKLKGS---------------- 357
Q + A L +K K KGS
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 358 -------------LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVS 402
+ +Y+ L+ G+ + G + A ++FD+M+ + +S S V ++S
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C LK+ +A K D+M+ +GH P + K +I G
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
Query: 202 YAAEMIFKRACDEKIELQDD-TCGC---MLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
Y ++ K DE+ EL+ GC +L +L++ G V E Q+Y + E +
Sbjct: 161 YVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYT 220
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y VN CK EE + +VE G P + + C + ++ + +
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG + + L+ C R+ID+A+ L +K++ + V TY VL+ L R
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA+ + M+E + + ++ +++ LC + KA + +ML+ G P+ TY +I
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 437 SGF 439
+G+
Sbjct: 401 NGY 403
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 153/390 (39%), Gaps = 65/390 (16%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF-EV 100
G P V AL+D + ++ A + M+ PN T++ + LC GK E
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 101 VL---GLLDSGIYSSVMYN-LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L ++ G+ +V + ++I K GDF A+ R +M + P TY++ +
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQ 645
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
R + ++ ++ M E + P F + +I+ D+G+T A + KR D
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSS--LIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 217 ELQDDTCGCMLKAL--SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
E T ++K L K G+ K + + + A N++ + + V
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGS---------------EPELCAMSNMM----EFDTV 744
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL------SAVLDKGLLLDSF-- 326
LL +VE P A + + C G + E++ + L+ ++
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 327 CCSSLMEYYCSNRQIDKAI----------------ALHIKIEKLKGSL------------ 358
CC L ++ + + +D I L+ K EK +G+
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
D + +++DG+ K G +E +F+ M++
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 139/348 (39%), Gaps = 23/348 (6%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P NAL+ L +++ A+ L MV+ G+ P T +++ L + G F+
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 104 ----LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
+L SG Y I Y ++G A D + +M ++P TYSS++ G
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLIKGY 682
Query: 159 RRYEKTEVSDRIVGLMVEKKLLP---------KHFLS-------GNDYVIQKLSDMGKTY 202
+T + ++ M + P KH L G++ + +S+M +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAF 261
+ ++ + + + ++ + + G ++ A +++ H+ GI+ + + A
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ CK + E ++ D++ G++P + KG+ + + +L G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
D +++ ++ L +EK TY +L++G
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 210/472 (44%), Gaps = 51/472 (10%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ALS VL Y+ G +E+Y ++ +Y VP V ACN+LL L + + A +Y
Sbjct: 135 EALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYD 194
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG 126
M G S + ++ ++ + +C GK EV L++ I + V YN +I Y K G
Sbjct: 195 EMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLG 254
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFL 185
D A+ E+ + P T+ ++++G + SDR++ + E+ L + FL
Sbjct: 255 DIENAYLVFKEL-KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 186 SGNDYVIQKLSDMGKTYAAEMI-FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
N+ + K K AE I + A D K ++ T ++ L KEG+ + A+
Sbjct: 314 --NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA--TYNILINRLCKEGKKEVAVGFLD 369
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQ-----------------PE-----------EVCG 276
S++G+ + Y + CK + P+ V G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 277 LLRDVV-------ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ D V +RG P A + ++ C G++ + L S +LD+ +L D++ +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 330 SLMEYYCSNRQIDKA-IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+L++ + + D+A + +EK +DV ++ ++ G + G ++EA+ + M E
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEK-GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V ++ ++ +++ A+K M K KP+ TY +I+GF
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/483 (17%), Positives = 185/483 (38%), Gaps = 59/483 (12%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+ +++ + +G F+ + ++ G +V N ++DA YR + G
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGD 127
++ + P+ T++++ LC+ GK EV +G LD I +++ Y +I Y K +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ A L +M R P TY ++ G + + + ++++ + P +
Sbjct: 396 YDIASKLLLQMAE-RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY- 453
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ L G+ A+++F D I ++ + G EA +++ L
Sbjct: 454 -NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP------------------- 288
E+G+ V + A + C+ +E + + E +P
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 289 CAMELSRFVASQ----------------CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
A+++ R++ C +G +K EE + + L+ + ++L+
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 333 EYYC-SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK----------DGRMEEAVR 381
+ ++KA+ + K + T++ LL G K DG
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Query: 382 IF-DYMKELKVVSSSSFVIVVSR----LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+F ++ +K S + LC ++ A D+M+K G PD ++ ++
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 437 SGF 439
GF
Sbjct: 753 HGF 755
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 70/370 (18%), Positives = 134/370 (36%), Gaps = 63/370 (17%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G P + N L+ L + A L+ M+ + P+ + ++ + RSG F+
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 100 -VVLGL-LDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
V L ++ G+ V++ N +I + + G A +N M N +L P TYS+I+D
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM-NEEHLVPDKFTYSTIID 563
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPK---------HFLSGNDY----------------- 190
G + + + +I M + K P F D+
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 191 -------VIQKLSDMGKT-----YAAEMIFKRACDEKIELQDDTCGCMLKAL-------- 230
+I+ L+ T Y E++ C + T C+L+
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVP----NEVTFNCLLQGFVKKTSGKV 679
Query: 231 ------SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
S G+ + +H + G + + Y + + LC + C +V++
Sbjct: 680 LAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKK 739
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI-DK 343
G+ P + + + C G K+ + L + L + S ++E + I +
Sbjct: 740 GFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEA 799
Query: 344 AIALHIKIEK 353
+ LH +EK
Sbjct: 800 STILHAMVEK 809
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 191/423 (45%), Gaps = 30/423 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G+ D L+++ M G +P V LL +L +I A L G+M
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G P++ T++ LC+ G+ F+ ++ L D G + Y+ +ID + F
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
F M RN++P Y+ ++ G + E + + +M +K +P F +
Sbjct: 331 GFGYYKTMLE-RNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCY--NT 387
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V++ L D G A + + L T M+ L K G V EA+QI+ + E G
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG 447
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC--------------AMELSRF 296
Y A ++ +E + EE +L +E G P + L +
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKL 506
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
V C G+ + +LL +++D G++ D ++L+ C R +D A+ L +++ LKG
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ-LKG 565
Query: 357 -SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRK 412
S D TY L+DGL + R +A+ +F + L+ SS S I ++ LC +K+L +
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNI--LQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Query: 413 AMK 415
A+
Sbjct: 624 AIN 626
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 179/452 (39%), Gaps = 57/452 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S A + ++ +S G D ++ + M + P N +L AL I LA
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
LY MV G +PN+ T YN+++D K+G
Sbjct: 192 LALYNRMVAAGCAPNRAT------------------------------YNVLMDGLCKQG 221
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH--- 183
G A +EM + R + P Y+ +L K + + +++G M +K LP
Sbjct: 222 MAGDALKMFDEMLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTY 280
Query: 184 --FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
FLSG L +G+ A D L C++ L + R E
Sbjct: 281 NAFLSG-------LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFG 333
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
Y + ER I+ Y + + + E+ L + ++G++P + + C
Sbjct: 334 YYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLC 393
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + L S +L L+LDS + ++ C +D+A+ + ++ + V
Sbjct: 394 DHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVM 453
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMK--------------ELKVVSSSSFVIVVSRLCHL 407
TY+ L+DG +++GR+EEA +F M+ +V S S +V +C
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQS 513
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ KA K ++ G PD TY +I+G
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGL 545
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 168/400 (42%), Gaps = 34/400 (8%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
+ G D L +M+ GFVP N +L L ++ A L M+++ + +
Sbjct: 358 AEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNE 137
T +++ LC+ G + + + D G +VM YN +ID + ++G A ++
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M G N P S + + GA + +E ++V M +
Sbjct: 478 MEMGNN--P--SLFLRLTLGANQVRDSESLRKLVHDMCQS-------------------- 513
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A + + D + T ++ L K + A++++ + +GI+ +
Sbjct: 514 -GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEIT 572
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ L + H+ + L +++++ G P + + S C K + L L
Sbjct: 573 YGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYL 632
Query: 318 DK--GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
K ++S ++ + + +D + IKI++ GS+ Y + L GL + R
Sbjct: 633 PKKYNFPVESEVLANAHKEI-EDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRR 691
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
++A+RIF ++E + ++ + ++++ LC + L A+
Sbjct: 692 TDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAV 731
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 185/396 (46%), Gaps = 10/396 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFTWSLVAQILCRSGKFEV---VLGLLD 106
L+ L+ +N+++ A L+ +VR+ + P++ + V LC+ G + +L L++
Sbjct: 146 TTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLME 205
Query: 107 SGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
GI + +YN+VID + K G A LNEM +N+ P TY+S++DG + +
Sbjct: 206 QGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEM-KQKNIPPDIITYTSLIDGLGKLSQW 264
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E + M+ + P + + VI L GK AE I ++ +E + T
Sbjct: 265 EKVRTLFLEMIHLNIYPD--VCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYN 322
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ G++ A +I+ + ++GI Y A +N ++ + ++ L R++ +
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + S + G+ + + + G + + + +L+ Y N +++A
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
++ K+E+ + ++ Y +++GL K+G++++A F+ + + + ++ ++S
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L +A +M G PD TY ++ GF
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 167/373 (44%), Gaps = 8/373 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+D + G+ + M+ P + +L+D L + ++ L+ M+
Sbjct: 217 NIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIH 276
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
+ P+ T++ V LC+ GK E ++ +++ G+ + + YN+V+D Y +G G
Sbjct: 277 LNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGR 336
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M + + + P +Y+++++G +K + + ++ + + L P +
Sbjct: 337 ARRIFDSMID-KGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS--IVTCSV 393
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ L ++G+T A++ F T +L K G V+EA+ +H + R
Sbjct: 394 LLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y A +N LCK + ++ + G P + + ++ C +G E +
Sbjct: 454 EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++L + D G L D+ + ++ + + ++ + A +I S + AT ++L+D +
Sbjct: 514 DMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDII 573
Query: 371 FKDGRMEEAVRIF 383
+D + + F
Sbjct: 574 AEDPSLLNMIPEF 586
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 9/248 (3%)
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+D+G + A + FK+ I + T +++ L E +VK+A+ ++ + I D
Sbjct: 123 TDLGFSVLA-IHFKKG----IPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPD 177
Query: 256 SDYYAFV-NVLCKEHQPEEVCGLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELL 313
Y V + LCK+ ++ LLR ++E+G P + + + C G LL
Sbjct: 178 EVMYGTVMDGLCKKGHTQKAFDLLR-LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLL 236
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + K + D +SL++ Q +K L +++ L DV T++ ++DGL K+
Sbjct: 237 NEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKE 296
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G++E+A I YM E V + ++ +V+ C ++ +A + D M+ G +PD +Y
Sbjct: 297 GKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISY 356
Query: 433 KQVISGFM 440
+I+G++
Sbjct: 357 TALINGYV 364
>gi|145334827|ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g57250, mitochondrial; Flags: Precursor
gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 971
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 174/398 (43%), Gaps = 22/398 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G +D L R M G V + + L+D L ++ + A L G M+++GV PN
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 82 KFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + + LC+ GK E L L GI +Y +ID +KG+ AF L
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M R + P TY+++++G R E EVS +VG ++ L ++ +
Sbjct: 372 DM-EQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIK-----V 425
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
Q + A I +R + KI + C +LKA G EA +Y + E +T
Sbjct: 426 QNID------AVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y + CK Q EE + ++ + + A+ +R + + C KG E+
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEV 538
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L + +KGL LD +L+ +N + L +E+L + + + + L K
Sbjct: 539 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCK 598
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
G E A+ ++ M+ + + I+ + + +L+ L
Sbjct: 599 RGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 636
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 196/458 (42%), Gaps = 39/458 (8%)
Query: 8 RDSQSDALSLVLDCYSHKGLF------------------MD-GLEVYRMMRV----YGFV 44
RD S L ++ DC + G F MD +EV MM Y F
Sbjct: 111 RDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFD 170
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFTWSLVAQILCRSGKFEVVLG 103
V C+A++ + + LA + + V GV PN T++ + LC+ GK + V
Sbjct: 171 NFV--CSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 228
Query: 104 LL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L+ D G + V Y+ I Y K G A + EM + + +YS ++DG
Sbjct: 229 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE-KGMNRDVVSYSILIDGL 287
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ E + ++G M+++ + P L +I+ L MGK A ++F R IE+
Sbjct: 288 SKEGNVEEALGLLGKMIKEGVEPN--LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEV 345
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+ ++ + ++G + A + + +RGI Y +N LC + E
Sbjct: 346 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA---- 401
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
D V +G + + S + S V E+ L+ + +D C+ L++ +
Sbjct: 402 -DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLM 460
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV 398
+A AL+ + ++ + D ATY ++ G K G++EEA+ +F+ +++ V ++ +
Sbjct: 461 GAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYN 520
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ LC L A + E+ + G D T + ++
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 159/400 (39%), Gaps = 89/400 (22%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--- 106
CN LL A A LY AM ++P+ T++ + + C++G+ E L + +
Sbjct: 450 CNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 509
Query: 107 -SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
S + ++V YN +ID KKG A + L E+ +EK
Sbjct: 510 KSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL----------------------WEKGL 547
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D + + LL +G D I +G Y E +L D C
Sbjct: 548 YLD----IHTSRTLLHSIHANGGDKGI-----LGLVYGLE-----------QLNSDVCLG 587
Query: 226 MLK----ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
ML L K G + AI++Y ++ +G+TV P + L D
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVT---------------FPSTILKTLVDN 632
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ +++ + + G+ ++ + ++ GL + F +L CS
Sbjct: 633 LR------SLD-AYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKAL--NLCS---- 679
Query: 342 DKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
K +G +L+ TY+ L++GL + G + EA+R+FD ++ + +V S ++ I
Sbjct: 680 ---------FAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGI 730
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC A K D M+ G P+ Y ++ G+
Sbjct: 731 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 154/383 (40%), Gaps = 47/383 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P +++ + L LYR + Y + ++ N +S+V+ ++E
Sbjct: 21 GFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDA 80
Query: 102 ----------------LGLLDSGIY---------------------------SSVMYNLV 118
+LDS I+ SS+ + +
Sbjct: 81 EKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSL 140
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY--SSILDGARRYEKTEVSDRIVGLMVE 176
I + +KG+ A + L EM +N+ F + S+++ G + K E++ V+
Sbjct: 141 IYRFVEKGEMDNAIEVL-EMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVD 199
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+L + ++ ++ L +GK + +R DE E + K G +
Sbjct: 200 SGVLVPNLVTYTT-LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGAL 258
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A+ + E+G+ Y ++ L KE EE GLL +++ G P + +
Sbjct: 259 VDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C GK +E L + +L G+ +D F +L++ C +++A ++ +E+
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 357 SLDVATYDVLLDGLFKDGRMEEA 379
+ TY+ +++GL GR+ EA
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEA 401
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYY--AFVNVLCKEHQPEEVCGLLRDVVERG-YIP 288
++G + AI++ +++ + + ++ A ++ CK +PE G V+ G +P
Sbjct: 146 EKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 205
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + V++ C GK EV +L+ + D+G D S+ + Y + A+
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSS-------- 396
++ + + DV +Y +L+DGL K+G +EEA+ + M E +++ ++
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 397 ------------------------FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+V ++ +C L +A +M + G +P TY
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 433 KQVISGF 439
VI+G
Sbjct: 386 NTVINGL 392
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 80/164 (48%)
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ L T ++ L ++G + EA++++ + G+ + Y ++ LCKE +
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL +V +G +P + + V C G+ ++ ++S + + D+F SS+++ Y
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
C +++A+++ + + S D + L+ G GRMEEA
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 849
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 34/322 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G + L + + G N+L++ L +Q + A L+ ++
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN 718
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G+ P++ T+ ++ LC+ G F LLDS + ++YN ++D Y K G
Sbjct: 719 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 778
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++ GR +TP T SS++ G + E + + +K + F G +
Sbjct: 779 AMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF--GFLF 835
Query: 191 VIQKLSDMGKTYAA-----EMIFKRACDEKIELQD------DTCGCMLKALSKEGRVKEA 239
+I+ G+ A EM+ + + I D ++ L L ++GRV +A
Sbjct: 836 LIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQA 895
Query: 240 IQIYHLISER----GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
I+I IS G + F+N + +E ++ ++ Y+ L
Sbjct: 896 IKILDEISSTIYPSGKNLGSYQRLQFLNDVNEE-----------EIKKKDYVHDFHSLHS 944
Query: 296 FVASQCGKGKWKEVEELLSAVL 317
V+S C GK ++ E + +VL
Sbjct: 945 TVSSLCTSGKLEQANEFVMSVL 966
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 182/398 (45%), Gaps = 16/398 (4%)
Query: 6 EGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
E R + L S++++ Y+ G F D ++ +R++R + +C L D L + N
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDS-GIYSSVM-YNLV 118
A Y ++ G P+ ++++ LC+ K +++ G + G+ +V+ +N +
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I+ Y K G+ F RL + P TYS +++G + + + ++++ M ++
Sbjct: 267 INGYCKSGNLDQGF-RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325
Query: 179 LLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
L+P N + + +D+G +M+ K + I T ++ L K G
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI-----TYNTLINGLCKVGD 380
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++EA ++ +++RG+ Y ++ CKE E + +++V+ G + +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
++ C +G+ E E L +L+ G+ D + ++ +C + L +++
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
V TY+VLL+GL K G+M+ A + D M L VV
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 40/344 (11%)
Query: 106 DSGIYSSVM--------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT-PGFSTYSSILD 156
DSG +S + +NL I F+S G FDRL ++ NLT P ++ Y ILD
Sbjct: 167 DSGYFSDAIQCFRLVRKHNLQIPFHS----CGYLFDRLMKL----NLTSPAWAFYEEILD 218
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + ++ +L K A+++F +
Sbjct: 219 CGYPPDVCKF----------------------NVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ K G + + ++ + E + Y +N LCKE Q ++
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++ +RG +P + + + C G+ E+ +L KG+ D ++L+ C
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSS 395
+ +A L I++ + D TY +L+DG K+G +E A+ I M KE + +
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++S C ++ +A + EML+ G KPD+ATY VI GF
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ +D G A F+ +++ +CG + L K A Y I + G
Sbjct: 161 LMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCG 220
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ ++ LCKEH+ E L ++ +RG P + + + C G +
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L +++ + D F S L+ C Q+D A L +++ + T+ L++G
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
GR + + I+ M V ++ +++ LC + +LR+A K EM + G KPD+
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 430 ATYKQVISG 438
TY +I G
Sbjct: 401 FTYTMLIDG 409
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 194/446 (43%), Gaps = 50/446 (11%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I +G S S ++ Y+ G D ++ +R+ + + + C LL+ + + +
Sbjct: 152 ILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMS 211
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIY-SSVMYN 116
+A Y ++ G PN +T++++ LC+ GK + + D +G+ ++V +N
Sbjct: 212 SPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFN 271
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+I+ Y K G+ F RL + + P TYS+++DG + + ++ D
Sbjct: 272 TLINGYCKSGNLEEGF-RLKMVMEEFRVFPDVFTYSALIDGLCK--ECQLED-------- 320
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
A +FK CD + D T ++ K GRV
Sbjct: 321 ---------------------------ANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRV 353
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
A++IY + +G+ Y ++ LCK E + ++ +RG IP +
Sbjct: 354 DLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTL 413
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI-DKAIALHIKIEKLK 355
+ C +G + E+ ++ +G+ LD+ ++++ C + +I D L E L+
Sbjct: 414 LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR---EMLR 470
Query: 356 GSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRK 412
L D TY +++DG K G ++ ++ M+ + + ++ ++++ LC +++
Sbjct: 471 AGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKN 530
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISG 438
A + ML +G PD+ TY ++ G
Sbjct: 531 ADMLLNAMLNLGVVPDDITYNILLQG 556
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ +L GK A++IF ++ + ++ K G ++E ++ ++ E
Sbjct: 236 NVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEE 295
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y A ++ LCKE Q E+ L +++ +RG +P + + + QC G+
Sbjct: 296 FRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDL 355
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+ + KGL D ++L++ C +A ++ K D TY LLD
Sbjct: 356 ALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLD 415
Query: 369 GLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K+G +E A+ + M KE + + +F ++S LC ++ A + EML+ G KP
Sbjct: 416 GSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKP 475
Query: 428 DEATYKQVISGF 439
D+ TY V+ GF
Sbjct: 476 DDGTYTMVMDGF 487
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 150/340 (44%), Gaps = 43/340 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + +++ Y G +G + +M + P V +AL+D L ++ ++ A
Sbjct: 262 GLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDA 321
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSS-VMYNLVIDF 121
+ L+ M G+ PN T++ + C++G+ ++ L + G+ + V+YN +ID
Sbjct: 322 NHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDG 381
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G F A + EM R L P TY+++LDG+ + E+
Sbjct: 382 LCKGGYFREARKFVGEMTK-RGLIPDKFTYTTLLDGSCKEGDLEL--------------- 425
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
A EM K E I+L + ++ L ++G++ +A +
Sbjct: 426 ---------------------ALEMR-KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAER 463
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ G+ D Y ++ CK+ + LL+++ G+IP + + + C
Sbjct: 464 TLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLC 523
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G+ K + LL+A+L+ G++ D + L++ +C + ++
Sbjct: 524 KQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+D + KG G ++ + M+ G +P V N L++ L +Q +++ A L AM+
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLN 540
Query: 76 DGVSPNKFTWSLVAQILCRSGK---FEVV---LGLL-DSGIYSSVMYNL 117
GV P+ T++++ Q C+ GK F+ V +GL+ D Y S+++ L
Sbjct: 541 LGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLLHEL 589
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
H + C ++ ++ A L FV S+ GKG V S + KG L SF
Sbjct: 108 HTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSV--FASILETKGTLSSSFVF 165
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+LM Y + AI +K + LL+ + K A+ +
Sbjct: 166 DALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFY----- 220
Query: 389 LKVVSSS------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L+++ S +F ++++RLC +++ A DE+ K G +P ++ +I+G+
Sbjct: 221 LEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGY 277
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 188/446 (42%), Gaps = 38/446 (8%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G LS+++ ++ + +E++ M YGFV + + L++ L ++ EI A
Sbjct: 275 GMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGLCQKKEIGKA 334
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---------DSGIYSSVMYNL 117
L+ M R V+P+ + + CR G F + GL SG+ + ++N+
Sbjct: 335 VKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIA-GLFINENARQLKPSGVIA--LFNV 391
Query: 118 VIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIV--GLM 174
V++ + G AA+ L M G+ ++ G + + ++D + + S IV GL
Sbjct: 392 VLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNSDSFNIVVCGLC 451
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
KKL D + + DM C K+ + +D ++ L
Sbjct: 452 KVKKL---------DNALALIKDMTGI---------GCKGKLLMFND----LIHELCSLD 489
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ E ++++L+ G+ + Y + +C+ P LLRD+ G+ P +
Sbjct: 490 RLDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCT 549
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
V C G+ E + L +L G L D S+ M C ++D A+ + I
Sbjct: 550 EMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSK 609
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
DV +++L++G G++ EA + + M E + S ++ +++ C + KA
Sbjct: 610 YYLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKA 669
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++M+ P TY +I G
Sbjct: 670 IACLNKMIDEEESPTVVTYTSLIDGL 695
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 8/259 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L++ R MR G P + C ++ L I A M++ G P+ T+S
Sbjct: 529 ALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMN 588
Query: 91 ILCRSGKFEVVLGL---LDSGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++G+ + LG+ + S Y V +N++I+ + G A + + EM + L
Sbjct: 589 GLCKTGEVDNALGIFRDISSKYYLPDVVAHNILINGFRISGKLSEAQEVMEEMLE-KGLF 647
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+ ++D + E + + M++++ P + +I L G+ A
Sbjct: 648 PSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPT--VVTYTSLIDGLCSTGRPDEAI 705
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ + D+ + L K RV A+ Y + +G + F+N L
Sbjct: 706 ALWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMMTKGFELDTFSCLYFINFL 765
Query: 266 CKEHQPEEVCGLLRDVVER 284
+ C LL++V+++
Sbjct: 766 ISTGNATKGCELLKEVLQK 784
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 43/223 (19%)
Query: 222 TCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDSDYYAFVNVL---CKEHQPEEVCGL 277
T C+L L+K GR +A ++ ++ G D Y ++L C +P++ G+
Sbjct: 176 TFNCLLDTLAKAGRADDAEARLQEMVVRCGD--ESVDKYTLTSLLQCYCNAGRPDDANGV 233
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +RG++ D + L +
Sbjct: 234 FERMSQRGWV------------------------------------DEHVLTILAVAFSK 257
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
++D A+ L ++E L T VL+ G K R+++A+ +FD M V+
Sbjct: 258 WGKVDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPM 317
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +++ LC KE+ KA+K +EM + PD K+++ F
Sbjct: 318 YSVLIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAF 360
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/317 (17%), Positives = 113/317 (35%), Gaps = 68/317 (21%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G +++ +M+ G +P+ N+L + R+ + A L M +G P + +
Sbjct: 493 EGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMV 552
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
Q LC SG+ L LD + + ++V
Sbjct: 553 QQLCISGRITEALQFLDEMLKMGFLPDIV------------------------------- 581
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TYS+ ++G KT D +G+ + + K++L D V +
Sbjct: 582 TYSAAMNG---LCKTGEVDNALGIF--RDISSKYYLP--DVVAHNI-------------- 620
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++ G++ EA ++ + E+G+ Y ++V CK
Sbjct: 621 ----------------LINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSG 664
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
E+ L +++ P + + + C G+ E L ++DKG + +
Sbjct: 665 NIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYT 724
Query: 330 SLMEYYCSNRQIDKAIA 346
+ + C ++D A+
Sbjct: 725 AFVNGLCKRARVDTALT 741
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 185/426 (43%), Gaps = 75/426 (17%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG 108
+L +L + + LA L+ M++ GV +++ ++ + C S + GL+ G
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228
Query: 109 I-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ S+V YN+++ K A + N M N +T TY +++ G R E+ E++
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN-IGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 168 DRIVGLMVEKKLLP--------------KHFLSGNDYVIQKLSDMG---KTYA------- 203
RI M+ +P K + + KL D+G +A
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 204 ---------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
A+ +FK +E + T ++ AL K G +++A+ ++ + ++GI V
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + +N CK+ + GLL +V+ G P A S +A C G EL
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ ++G+ +++ ++L+ +C ++++D
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMD-------------------------------- 495
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
EA R+FD M + V+ + +F +++ C + +RKA + +D+M++MG KPD TY+
Sbjct: 496 ---EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552
Query: 434 QVISGF 439
+ISG
Sbjct: 553 SLISGL 558
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 201/483 (41%), Gaps = 69/483 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ +G+ D L ++ MR G V N+L++ +Q + A
Sbjct: 368 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA 427
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDF 121
L MV++G++P ++S + LCR+G + L + GI +++ + +I+
Sbjct: 428 RGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALING 487
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ K A ++M + N+ P T++ +++G + ++ MVE L P
Sbjct: 488 FCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 546
Query: 182 KHFL-----------SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
++ SG + ++D+ +YA L + + +L
Sbjct: 547 DNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-------------LNNFSLTALLYGF 593
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG----- 285
+EGR E ++ ++ RG+ + + V K+H E+ C L R++ E+G
Sbjct: 594 FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDD 653
Query: 286 ------------------------------YIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y P + + + + C G E L
Sbjct: 654 IFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDG 374
+L +L + F + ++Y+ + ++KA LH + L+G L + ++++L+ GL K G
Sbjct: 714 MLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAG 771
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+++EA+ + + E S+ ++ LC + ++ KA + +EML G KPD Y
Sbjct: 772 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831
Query: 434 QVI 436
I
Sbjct: 832 IFI 834
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 178/412 (43%), Gaps = 51/412 (12%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ M+R+ GFVP+ + C+ ++D L ++ + A L + G+ PN F ++ + LC
Sbjct: 291 THDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349
Query: 94 RSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNEMCNGRNLT 145
++ +F+ + + G+ + V Y ++I K+G D FD++ + +
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+S+++G Y K DR GL LSG V + L+ +Y+
Sbjct: 410 P----YNSLING---YCKQGSLDRARGL-----------LSG--MVKEGLTPTAASYSP- 448
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ L + G + ++++ ++ERGI + + A +N
Sbjct: 449 --------------------LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGF 488
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + +E L +++ IP + + + C G ++ +L +++ GL D+
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ SL+ C + KA +E L+ + LL G F++GR E ++D
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 608
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M V + SF I+V + K+ EM + G KPD+ Y +I
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 172/402 (42%), Gaps = 17/402 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V A NAL+D L + A L+ M G+ PN+ T++++ LC+ G E
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 102 LGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L D GI +V YN +I+ Y K+G A L+ M LTP ++YS ++
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK-EGLTPTAASYSPLIA 451
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRAC 212
G R + + M + + + ++ N+Y L + K A +F +
Sbjct: 452 GLCR------NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + + T M++ G +++A Q+Y + E G+ + Y + ++ LC
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + D+ + L+ + +G++ E L + +G+ LD + ++
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+K+ L ++++ D Y ++D L K+ M +A+ +D M +
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 685
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++ + ++++ LC L A EML P++ TY
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 143/365 (39%), Gaps = 40/365 (10%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW-SLVAQILCRSG---KFE 99
+P N +++ IR A LY MV G+ P+ +T+ SL++ + SG E
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 100 VVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
V L +S + ++ ++ + ++G F + +EM R + +++ I+ A
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV-RGVKLDLVSFTIIVYAA 628
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHF--------LSGNDYVIQKLS-------------- 196
+ E S + M E+ + P LS + +IQ L+
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNT 688
Query: 197 -----------DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
G +AE++ K + T C L + EG +++A + H
Sbjct: 689 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HS 747
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+G + + LCK + +E L+ + E G+ P + S + C G
Sbjct: 748 AMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 807
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ EL + +L KGL D + + + + + DKA+ ++ + + + TY
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRA 867
Query: 366 LLDGL 370
LL G+
Sbjct: 868 LLSGI 872
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 188/426 (44%), Gaps = 40/426 (9%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G +P V + ++D E++ L M G+ PN +T+S + +LC+SGK
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195
Query: 98 F----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+V+ ++ G++ V+Y +ID + K G+ AA+ +EM R + P +S
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM-EAREIVPDSIAFS 254
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLP-------------------KHFLSGNDYVIQ 193
+++ G K +D++ M++K P K F N V
Sbjct: 255 ALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI 314
Query: 194 KLSDMGKTY--------------AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
L+ TY A + C + ++L T ++ L K G + +A
Sbjct: 315 GLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQA 374
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++ + E G+ Y ++ K + + LLR++++RG P + + +
Sbjct: 375 VKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNG 434
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C GK ++ E LL +L+KG++ ++ +S+M+ YC + + ++ + D
Sbjct: 435 LCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPD 494
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD 418
TY++L+ G K M+EA + M E + +++SS+ ++ K+L +A + +
Sbjct: 495 SNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFE 554
Query: 419 EMLKMG 424
EM + G
Sbjct: 555 EMRREG 560
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G+V E ++ + +RG+ Y ++ CK + L ++ R +P
Sbjct: 190 LCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPD 249
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
++ S + G GK E ++L + ++ KG D ++L++ YC ++ KA LH
Sbjct: 250 SIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHN 309
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHL 407
++ ++ + +V TY L DGL K G ++ A + M K L+ ++ S++ +V+ LC
Sbjct: 310 QMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ-LNISTYNTIVNGLCKA 368
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A+K +EM + G PD TY ++ +
Sbjct: 369 GNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 8/322 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + ++D Y G ++ M G P V AL D L + E+
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDT 338
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVID 120
A+ L M R G+ N T++ + LC++G + L++ +G++ ++ Y ++D
Sbjct: 339 ANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMD 398
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G+ A + L EM + R L P T++ +++G K E +R++ M+EK ++
Sbjct: 399 AYYKTGEMVKARELLREMLD-RGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++++ + I++ C + + +T ++K K +KEA
Sbjct: 458 PNA--ATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAW 515
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + E+ + S Y A + K + E L ++ G + A + FV
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMN 575
Query: 301 CGKGKWKEVEELLSAVLDKGLL 322
+G + EL ++K LL
Sbjct: 576 YEEGNMETTLELCDEAIEKCLL 597
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ +L + G+++EA + + +G Y ++ C + ++V L++++ +G
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P S + C GK E E++L ++ +G+ D ++L++ +C A
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAY 235
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRL 404
L ++E + D + L+ GL G++ EA ++F+ M K+ ++ ++
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L E++KA H++M+++G P+ TY + G
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 181/423 (42%), Gaps = 54/423 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D V+ M P V LLD L + + A L G MV GV PN T+
Sbjct: 175 GRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234
Query: 86 SLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+ + LC+ G+F+ V LL D Y+ V++ L K G G L
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLC-----KHGKVGHGAKVL 289
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+E G+ + TY+++++G + + + ++ LM ++ P +Q
Sbjct: 290 HEAI-GKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPG---------VQTF 339
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+++ + CG G+V +A+ ++ G++
Sbjct: 340 NEVIHGFC-------------------CG---------GKVHKAMAFLTQMAGAGLSPNT 371
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ + ++ C + + LL + E G +P + F+ + C +G+ +E L S
Sbjct: 372 VTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSC 431
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ KG+ + +SL+ YC ID A L K+ DV TY+ L+DGL K R
Sbjct: 432 LPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKR 491
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
++ A+ + D MK+ + ++ +F I++ ++ K+ A K +++M+ G KPD+ TY
Sbjct: 492 LDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTL 551
Query: 435 VIS 437
IS
Sbjct: 552 KIS 554
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/432 (17%), Positives = 161/432 (37%), Gaps = 95/432 (21%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+G F D ++ M + P ++ L + ++ + + + GV+
Sbjct: 243 QEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVL 302
Query: 84 TWSLVAQILCRSGKFEVVLGLL--------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
T++ + C+ G + L +L + G+ + +N VI + G A L
Sbjct: 303 TYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQT---FNEVIHGFCCGGKVHKAMAFL 359
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+M G L+P T++S++ G + +++ R++ LM E +LP
Sbjct: 360 TQMA-GAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDR------------ 406
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+TYA IF + AL EG+++EA ++ + +GI +
Sbjct: 407 ----QTYA---IF------------------IDALCDEGQLEEAHSLFSCLPMKGIKAHN 441
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + V+ C+ + GL+ + +P
Sbjct: 442 VIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP--------------------------- 474
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
D ++L++ C +++D+AI L K++K T+++L+ + D +
Sbjct: 475 --------DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD------EMLKMGHKPD 428
+A ++++ M ++ + +S A K + EM + G PD
Sbjct: 527 HADAAKMYEQMISSGCKPDKQTYTLKIST----DWFEGATKEENIDMAVVEMHEAGVFPD 582
Query: 429 EATYKQVISGFM 440
TY +I ++
Sbjct: 583 VETYNAIIKAYV 594
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 8/218 (3%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDS------DYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ R A ++ HL++ G ++ Y +N CK + L + E
Sbjct: 59 IAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMRE 118
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK-GLLLDSFCCSSLMEYYCSNRQID 342
G P + + C G L + + G D + + L++ C+ +ID
Sbjct: 119 AGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRID 178
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
A + K+ + V TY VLLDGL K R+ EA + M VV + ++ ++
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALI 238
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC K ++M H PD TY QV+ G
Sbjct: 239 GGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGL 276
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 151/402 (37%), Gaps = 61/402 (15%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P N+L+ E ++A L M GV P++ T+++ LC G+ E
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425
Query: 102 LGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L GI + +V+Y ++ Y + GD +AF + +M + N P TY++++D
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS-ENCMPDVHTYNTLID 484
Query: 157 GARRYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM-------- 206
G + ++ DR + L+ ++K+ + + N + Q L D AA+M
Sbjct: 485 GLCKVKRL---DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSG 541
Query: 207 ---------------IFKRACDEK------IELQD-------DTCGCMLKALSKEGRVKE 238
F+ A E+ +E+ + +T ++KA G ++
Sbjct: 542 CKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEK 601
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE--------------EVCGLLRDVVER 284
A + + I + Y +N +C + + + L + E
Sbjct: 602 AFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCES 661
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
P + C + + +EVE LL + +LLD L+ YC+ +A
Sbjct: 662 DAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREA 721
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ + + +LL GL G AV IF M
Sbjct: 722 CEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDM 763
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 190/441 (43%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + L ++++C+ G V + G + N L++ L + + A
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDF 121
L+ MV G P+ T++ + LC+ G+ GL ++G V+ Y+ +ID
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K A D + M + ++P TY+S++ G + + + ++ M+ ++P
Sbjct: 272 LCKDRRVNEALDIFSYM-KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I G + A + K + +E T ++ S + V EA +
Sbjct: 331 N--IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK 388
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ ++ +G Y +N CK + E L +++ +G P + + + C
Sbjct: 389 LFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC 448
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ +E +L +L G L D S L++ +C + KA L ++ ++
Sbjct: 449 QLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMV 508
Query: 362 TYDVLLDGLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
Y++L+D + K ++EA ++F +++ L+ + + +++ LC L +A++
Sbjct: 509 MYNILIDAMCKSRNLKEARKLFSELFVQGLQ-PNVQIYTTIINGLCKEGLLDEALEAFRN 567
Query: 420 MLKMGHKPDEATYKQVISGFM 440
M + G P+E +Y +I GF+
Sbjct: 568 MEEDGCPPNEFSYNVIIRGFL 588
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 146/338 (43%), Gaps = 8/338 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+++ M+ G P + N+L+ L + R AS + M+ + PN T+SL+
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339
Query: 90 QILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
I C+ G G+L + G+ +V+ Y+ +++ YS + + A +L ++ +
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEA-RKLFDVMITKGC 398
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P +Y+ +++G + ++ + ++ M+ + L P + + +I L +G+ A
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD--IVSYNTLIDGLCQLGRLREA 456
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+FK T +L K+G + +A +++ + + Y ++
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+CK +E L ++ +G P + + C +G E E + + G +
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
F + ++ + ++ +A+ L ++ + DVAT
Sbjct: 577 EFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 201/477 (42%), Gaps = 59/477 (12%)
Query: 17 LVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
VL+ YS+ GL + LEVYR M G P++ +AL+ AL ++ + +
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFY 122
L M G+ PN +T+++ ++L R+GK +E+ + D G V Y ++ID
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307
Query: 123 SKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G A + +M NG P Y ++LD + + M +P
Sbjct: 308 CNAGQLENAKELFVKMKANGHK--PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365
Query: 182 K--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
F D V+ K D + +A + ++ + I T ++ L + GR+++A
Sbjct: 366 DVVTFTILVD-VLCKARDFDEAFATFDVMRK---QGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++ + G+ Y F++ K + + + +G +P + + + S
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G+ +E + + + + + GL DS + +M+ Y Q+D+A+ L ++ + D
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV---------------------------- 391
V + L+D L+K GR++EA ++FD MK++K+
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 392 --------VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ SF ++ C E+ A+K +M M KPD TY VI G +
Sbjct: 602 SMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 194/477 (40%), Gaps = 53/477 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G S ++++ CYS G + + + M G P V N+L+D+LY+ +
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVID 120
A ++ M +SP T++ + L + G+ + + L +S I +++ +N ++D
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K + A ++M + P TY++++ G + K + ++K +
Sbjct: 621 CFCKNDEVELALKMFSKM-TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSMH 678
Query: 181 PKH-----FLSG--------------NDY--------------------VIQKLSDMGKT 201
P H L G D+ +++ D
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAII 738
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GITVRDSDYYA 260
+A E++ C E D +++ L K R A QI+ +++ GI+ + Y
Sbjct: 739 FAEELVLNGICRE-----DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ L + H E+ L +D+ G P A + +A GK E+ EL ++ +
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D+ + ++ + +DKA+ + TY L+DGL K GR+EEA+
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913
Query: 381 RIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
R+F+ M + + + F I+++ + + A + M+ G +PD +Y ++
Sbjct: 914 RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILV 970
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 150/361 (41%), Gaps = 43/361 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E + M G++P V L+D L + + A + M + G+ PN T++ + L
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412
Query: 93 CRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
R+G+ E L LLD+ G+ + Y ID++ K G+ G A + +M + + P
Sbjct: 413 LRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM-KAKGIVPN 471
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
++ L L++MG+ A+ +
Sbjct: 472 IVACNASL-------------------------------------YSLAEMGRLREAKTM 494
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F + + T M+K SK G+V EA+ + + G + ++ L K
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ +E + + + P + + ++ +G+ ++ EL +++ K ++
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++L++ +C N +++ A+ + K+ + DV TY+ ++ GL K+ ++ A F +K
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 388 E 388
+
Sbjct: 675 K 675
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 136/315 (43%), Gaps = 14/315 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P +++ N L+ L + A L+ M G +P+ FT++++ + +SGK +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 102 LGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L I ++ YN+VI +K + A D ++ + + P TY ++D
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRTYGPLID 901
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + E + R+ M + P + + +I +G T A +FKR +E I
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIF--NILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF---VNVLCKEHQPEE 273
+ ++ L GRV EA+ ++ + G+ D D+ A+ +N L K + EE
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL---DPDFIAYNRIINGLGKSQRMEE 1016
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ RG +P + + + G ++ + + + GL D F ++L+
Sbjct: 1017 ALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Query: 334 YYCSNRQIDKAIALH 348
Y + + A ++
Sbjct: 1077 GYSLSENPEHAYTVY 1091
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 124/266 (46%), Gaps = 21/266 (7%)
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
LL H SG K++++ + Y EMI +R + I T ++ +L+K + +
Sbjct: 829 LLAVHGKSG------KITELFELYK-EMISRRCKPDAI-----TYNIVISSLAKSNNLDK 876
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-CAMELSRFV 297
A+ ++ + Y ++ L K + EE L ++ + G P CA+ F
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI----FN 932
Query: 298 ASQCGKGKWKEVE---ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
G GK + E +L ++++G+ D + L++ C ++D+A+ +++
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
D Y+ +++GL K RMEEA+ +++ M+ +V ++ ++ L + +A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++E+ G +PD TY +I G+
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGY 1078
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L+K GR++EA++++ +S+ G + + +N K E C L + +
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V G P + V C G+ E + + GL D + ++ ++++
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
++A+AL+ ++ D+ TY+ L+ L G +E+A R+++ EL++ V
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE---ELQLAGLEPDVFTY 1071
Query: 402 SRLCHLKELRK----AMKNHDEMLKMGHKPDEATYKQV 435
+ L L + A + M+ G P+ TY Q+
Sbjct: 1072 NALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 3/221 (1%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD-YYAFVNVLCKEHQPEEVCGLLR 279
+TC ML+ L +V++ ++ + ++ I RD D Y L ++ +L
Sbjct: 123 ETCNFMLEFLRVHDKVEDMAAVFEFMQKK-IIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + G++ A + + G E E+ ++ +GL S+LM R
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
+ + L ++E L +V T+ + + L + G+++EA IF M + ++
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC+ +L A + +M GHKPD+ Y ++ F
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G + + ++ M YG P + N L++ + + A L+ MV +G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
+ P+ +++++ LC +G+ + L L +G+ + YN +I+ K A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 133 DRLNEMCNGRNLTPGFSTYSSIL 155
NEM N R + P TY+S++
Sbjct: 1019 ALYNEMRN-RGIVPDLYTYNSLM 1040
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 194/444 (43%), Gaps = 22/444 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + D +++ Y G L+++ + +G P V N LLDAL +N+ ++
Sbjct: 103 DGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQM 162
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVID 120
+ LY M +DG+ PN FT++++ + LC++ + + L + G +V Y ++
Sbjct: 163 INPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVS 222
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G D E+ GR P Y++++DG + + EV+ +++G M++ +
Sbjct: 223 SLCKAGK----IDDARELA-GR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD 276
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P + +I L G A +F R CD I T ++K G++
Sbjct: 277 PN--VVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH----TFTPLIKGCFMRGKL 330
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA+ ++ L+ + G Y ++ LC EE + + G +P S
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G E + ++ G + + +++ C N D+A +L K+
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMK 415
+ + T++ + GL +GR+E A+++ + M+ + + +++ ++ L + + +A
Sbjct: 451 TPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
E+ +P+ TY V+ GF
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGF 534
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 114/258 (44%), Gaps = 6/258 (2%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+H S +I++L + + I ++ + I +D C++ + G ++A++
Sbjct: 71 QHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALK 130
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+++ I E G Y ++ L E++ + + L ++ + G IP + + + C
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ +L + +KG D+ ++++ C +ID A L + + V
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVP 245
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ L+DG+ K+GR+E A+++ M + V + S+ +++ LC + A +M
Sbjct: 246 VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305
Query: 421 LKMGHKPDEATYKQVISG 438
G + T+ +I G
Sbjct: 306 FLRGCDANIHTFTPLIKG 323
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 25 KGLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL +G +++ M+ +G +P ++ N LLDAL+R N+ A L+ + +
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDR 134
PN T++ V R+G L L + S+ YN +I Y K+G A
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV--- 191
+ + + + P TY+S++ GA + E + + + + + P +F + N V
Sbjct: 582 VERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP-NFATWNALVRCF 640
Query: 192 IQKLSDMGKTYAAEMIFKRA 211
L MG + + I ++
Sbjct: 641 FDSLGHMGPIHILDDILRKG 660
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 194/444 (43%), Gaps = 22/444 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + D +++ Y G L+++ + +G P V N LLDAL +N+ ++
Sbjct: 103 DGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQM 162
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVID 120
+ LY M +DG+ PN FT++++ + LC++ + + L + G +V Y ++
Sbjct: 163 INPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVS 222
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G D E+ GR P Y++++DG + + EV+ +++G M++ +
Sbjct: 223 SLCKAGK----IDDARELA-GR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD 276
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P + +I L G A +F R CD I T ++K G++
Sbjct: 277 PN--VVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH----TFTPLIKGCFMRGKL 330
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA+ ++ L+ + G Y ++ LC EE + + G +P S
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G E + ++ G + + +++ C N D+A +L K+
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMK 415
+ + T++ + GL +GR+E A+++ + M+ + + +++ ++ L + + +A
Sbjct: 451 TPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
E+ +P+ TY V+ GF
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGF 534
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 114/258 (44%), Gaps = 6/258 (2%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+H S +I++L + + I ++ + I +D C++ + G ++A++
Sbjct: 71 QHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALK 130
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+++ I E G Y ++ L E++ + + L ++ + G IP + + + C
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ +L + +KG D+ ++++ C +ID A L + + V
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVP 245
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ L+DG+ K+GR+E A+++ M + V + S+ +++ LC + A +M
Sbjct: 246 VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305
Query: 421 LKMGHKPDEATYKQVISG 438
G + T+ +I G
Sbjct: 306 FLRGCDANIHTFTPLIKG 323
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 25 KGLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL +G +++ M+ +G +P ++ N LLDAL+R N+ A L+ + +
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDR 134
PN T++ V R+G L L + S+ YN +I Y K+G A
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV--- 191
+ + + + P TY+S++ GA + E + + + + + P +F + N V
Sbjct: 582 VERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP-NFATWNALVRCF 640
Query: 192 IQKLSDMGKTYAAEMIFKRA 211
L MG + + I ++
Sbjct: 641 FDSLGHMGPIHILDDILRKG 660
>gi|8777358|dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
Length = 1012
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 174/398 (43%), Gaps = 22/398 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G +D L R M G V + + L+D L ++ + A L G M+++GV PN
Sbjct: 293 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 352
Query: 82 KFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + + LC+ GK E L L GI +Y +ID +KG+ AF L
Sbjct: 353 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 412
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M R + P TY+++++G R E EVS +VG ++ L ++ +
Sbjct: 413 DM-EQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIK-----V 466
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
Q + A I +R + KI + C +LKA G EA +Y + E +T
Sbjct: 467 QNID------AVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 520
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y + CK Q EE + ++ + + A+ +R + + C KG E+
Sbjct: 521 PDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEV 579
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L + +KGL LD +L+ +N + L +E+L + + + + L K
Sbjct: 580 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCK 639
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
G E A+ ++ M+ + + I+ + + +L+ L
Sbjct: 640 RGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 677
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 196/458 (42%), Gaps = 39/458 (8%)
Query: 8 RDSQSDALSLVLDCYSHKGLF------------------MD-GLEVYRMMRV----YGFV 44
RD S L ++ DC + G F MD +EV MM Y F
Sbjct: 152 RDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFD 211
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFTWSLVAQILCRSGKFEVVLG 103
V C+A++ + + LA + + V GV PN T++ + LC+ GK + V
Sbjct: 212 NFV--CSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 269
Query: 104 LL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L+ D G + V Y+ I Y K G A + EM + + +YS ++DG
Sbjct: 270 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE-KGMNRDVVSYSILIDGL 328
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ E + ++G M+++ + P L +I+ L MGK A ++F R IE+
Sbjct: 329 SKEGNVEEALGLLGKMIKEGVEPN--LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEV 386
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+ ++ + ++G + A + + +RGI Y +N LC + E
Sbjct: 387 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA---- 442
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
D V +G + + S + S V E+ L+ + +D C+ L++ +
Sbjct: 443 -DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLM 501
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV 398
+A AL+ + ++ + D ATY ++ G K G++EEA+ +F+ +++ V ++ +
Sbjct: 502 GAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYN 561
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ LC L A + E+ + G D T + ++
Sbjct: 562 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 599
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 159/400 (39%), Gaps = 89/400 (22%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--- 106
CN LL A A LY AM ++P+ T++ + + C++G+ E L + +
Sbjct: 491 CNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 550
Query: 107 -SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
S + ++V YN +ID KKG A + L E+ +EK
Sbjct: 551 KSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL----------------------WEKGL 588
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D + + LL +G D I +G Y E +L D C
Sbjct: 589 YLD----IHTSRTLLHSIHANGGDKGI-----LGLVYGLE-----------QLNSDVCLG 628
Query: 226 MLK----ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
ML L K G + AI++Y ++ +G+TV P + L D
Sbjct: 629 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVT---------------FPSTILKTLVDN 673
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ +++ + + G+ ++ + ++ GL + F +L CS
Sbjct: 674 LR------SLD-AYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKAL--NLCS---- 720
Query: 342 DKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
K +G +L+ TY+ L++GL + G + EA+R+FD ++ + +V S ++ I
Sbjct: 721 ---------FAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGI 771
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC A K D M+ G P+ Y ++ G+
Sbjct: 772 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 811
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 154/383 (40%), Gaps = 47/383 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P +++ + L LYR + Y + ++ N +S+V+ ++E
Sbjct: 62 GFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDA 121
Query: 102 ----------------LGLLDSGIY---------------------------SSVMYNLV 118
+LDS I+ SS+ + +
Sbjct: 122 EKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSL 181
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY--SSILDGARRYEKTEVSDRIVGLMVE 176
I + +KG+ A + L EM +N+ F + S+++ G + K E++ V+
Sbjct: 182 IYRFVEKGEMDNAIEVL-EMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVD 240
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+L + ++ ++ L +GK + +R DE E + K G +
Sbjct: 241 SGVLVPNLVTYTT-LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGAL 299
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A+ + E+G+ Y ++ L KE EE GLL +++ G P + +
Sbjct: 300 VDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 359
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C GK +E L + +L G+ +D F +L++ C +++A ++ +E+
Sbjct: 360 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 419
Query: 357 SLDVATYDVLLDGLFKDGRMEEA 379
+ TY+ +++GL GR+ EA
Sbjct: 420 QPSILTYNTVINGLCMAGRVSEA 442
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYY--AFVNVLCKEHQPEEVCGLLRDVVERG-YIP 288
++G + AI++ +++ + + ++ A ++ CK +PE G V+ G +P
Sbjct: 187 EKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 246
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + V++ C GK EV +L+ + D+G D S+ + Y + A+
Sbjct: 247 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 306
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSS-------- 396
++ + + DV +Y +L+DGL K+G +EEA+ + M E +++ ++
Sbjct: 307 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 366
Query: 397 ------------------------FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+V ++ +C L +A +M + G +P TY
Sbjct: 367 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 426
Query: 433 KQVISGF 439
VI+G
Sbjct: 427 NTVINGL 433
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 80/164 (48%)
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ L T ++ L ++G + EA++++ + G+ + Y ++ LCKE +
Sbjct: 727 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 786
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL +V +G +P + + V C G+ ++ ++S + + D+F SS+++ Y
Sbjct: 787 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 846
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
C +++A+++ + + S D + L+ G GRMEEA
Sbjct: 847 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 890
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 34/322 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G + L + + G N+L++ L +Q + A L+ ++
Sbjct: 700 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN 759
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G+ P++ T+ ++ LC+ G F LLDS + ++YN ++D Y K G
Sbjct: 760 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 819
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++ GR +TP T SS++ G + E + + +K + F G +
Sbjct: 820 AMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF--GFLF 876
Query: 191 VIQKLSDMGKTYAA-----EMIFKRACDEKIELQD------DTCGCMLKALSKEGRVKEA 239
+I+ G+ A EM+ + + I D ++ L L ++GRV +A
Sbjct: 877 LIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQA 936
Query: 240 IQIYHLISER----GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
I+I IS G + F+N + +E ++ ++ Y+ L
Sbjct: 937 IKILDEISSTIYPSGKNLGSYQRLQFLNDVNEE-----------EIKKKDYVHDFHSLHS 985
Query: 296 FVASQCGKGKWKEVEELLSAVL 317
V+S C GK ++ E + +VL
Sbjct: 986 TVSSLCTSGKLEQANEFVMSVL 1007
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 188/430 (43%), Gaps = 47/430 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY-GAMVRD 76
+L Y G + + ++ + +G +V + N LL+ L + L ++ +
Sbjct: 124 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 183
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAA 131
G++PN FT +L+ + LC+ E +LD G+ + V Y ++ Y +GD +A
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L EM + R P TY+ ++DG
Sbjct: 244 KRVLEEMLD-RGWYPDAITYTVLMDG---------------------------------- 268
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+G+ A + +IE + T G M++AL KE + EA ++ + +R
Sbjct: 269 ---YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSF 325
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
S ++ LC++H+ +E CGL R +++ +P LS + C +G+ E +
Sbjct: 326 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARK 385
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L DKG + ++L+ C ++ +A L + + K + TY+VL++GL
Sbjct: 386 LFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLS 444
Query: 372 KDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K+G ++E VR+ + M E + ++F+I+ L L + A+K M M K D+
Sbjct: 445 KNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIK-IVSMAVMNGKVDKE 503
Query: 431 TYKQVISGFM 440
+++ ++ F+
Sbjct: 504 SWELFLNKFV 513
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 12/300 (4%)
Query: 146 PGFS----TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
PGF+ TY SIL + + D + LM + + G + I L + G
Sbjct: 75 PGFTHNYDTYHSIL---FKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLA 131
Query: 202 --YAAEM-IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GITVRDSD 257
Y + M IF R D ++ + +L L + R ++ E GIT
Sbjct: 132 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 191
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
V LCK++ E +L ++ G +P + + + +G + + +L +L
Sbjct: 192 CNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 251
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
D+G D+ + LM+ YC + +A + +EK + + TY V++ L K+ +
Sbjct: 252 DRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 311
Query: 378 EAVRIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA +FD M + + SS V+ LC ++ +A +MLK PD A +I
Sbjct: 312 EARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 371
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 199/476 (41%), Gaps = 79/476 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVY--RMMRVYGFVPAVSACNALLDALYRQNEI 63
EG + + L+ Y+ + LF+D +++ ++ ++G N LL+ L +++
Sbjct: 107 EGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKM 166
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
+L +Y M G+ P+ T++ + + LCR+ + + +L+ S V
Sbjct: 167 KLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGV---------- 216
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
P +T+++++ G + + R+ M+E P
Sbjct: 217 ---------------------APDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTK 255
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I +G+ A ++ E T + L + G V A+++
Sbjct: 256 VTV--NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM 313
Query: 244 HLISERGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + G D D + + VN LCK Q EE G+L +VERG +P + + +
Sbjct: 314 DVMVQEG---HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370
Query: 301 CGKGKWKEVEELLSAVLDKGL---------LLDSFC-------------------CS--- 329
C + +E +L V KGL L+++ C C+
Sbjct: 371 CSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430
Query: 330 ----SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+L++ CS ++ KA+ L ++E TY+ ++DGL K R+EEA +FD
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490
Query: 386 MKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M +L+ +S + +F ++ LC K + A + +M+ G +P+ TY +++ +
Sbjct: 491 M-DLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHY 545
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 173/432 (40%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++++ Y G D L + GF P N ++ L + + A + M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDF 128
V++G P+ FT+++V LC++G+ E G+L+ + + +N +I
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D L + L+P T++ +++ + +++ R+ M P
Sbjct: 377 EEALD-LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTY-- 433
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L +GK A + K T ++ L K+ R++EA +++ +
Sbjct: 434 NTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDL 493
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI+ + ++ LCK+ + ++ L+ ++ G P + + + C +G K+
Sbjct: 494 QGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++L + G +DV TY L++
Sbjct: 554 AADILQTMTANGF-----------------------------------EVDVVTYGTLIN 578
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR + A+++ M+ + + ++ V+ L R AM EM ++G P
Sbjct: 579 GLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPP 638
Query: 428 DEATYKQVISGF 439
D TYK V G
Sbjct: 639 DAFTYKIVFRGL 650
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L++ R MR+ G A N ++ +L+R+N R A L+ M G P+ FT+ +V +
Sbjct: 589 ALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFR 648
Query: 91 ILCRSG-----KFEVVLGLLDSG 108
LCR G F+ +L ++D G
Sbjct: 649 GLCRGGGSIREAFDFLLEMVDKG 671
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 330 SLMEYYCSNRQIDKAIALHI-KIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
S +E Y + A+ L + +++ L G D Y+ LL+ L + +M+ ++ M
Sbjct: 118 SFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMG 177
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
E + +F ++ LC ++R A+ +EM G PDE T+ ++ GF+
Sbjct: 178 ERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFV 231
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 173/410 (42%), Gaps = 64/410 (15%)
Query: 39 RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF 98
R G+ +V N LDAL + N +LA + M R G P+ FT+S+V + LC++G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 99 ----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
E++ L +SG+ +V+ Y++VID K A + M +G P T++S
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+L G E+ M E +L E + K C+
Sbjct: 150 LLKGLCSGER----------MSEAFVL-----------------------FEYMAKAGCE 176
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ + +L L K GR+ EA +++ + E+ Y +FV LCK ++ E
Sbjct: 177 PNV----ISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAE 232
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
C R +V +G A+ S + C KG +E + + ++E
Sbjct: 233 ACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------------------NQMIE 274
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--- 390
+ C + +D+A ++ ++ L+ + K R+ + V +F MK +K
Sbjct: 275 HLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFY 334
Query: 391 -VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I+V LC K+L +A + +EM G PD TY ++ G
Sbjct: 335 CPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 179/430 (41%), Gaps = 23/430 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYG-FVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+V+D D LE+++ M G VP V N+LL L + A L+ M
Sbjct: 112 SVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMA 171
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
+ G PN ++S + LC++G+ + L + + S + +LV A
Sbjct: 172 KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLV-----------AYTSF 220
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+ +C + ++ + + S ++G++ +K H + +I+
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFS-TVIGILCKKG----HAEEAQNQMIEH 275
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS---ERGI 251
L G A F+ + ++ A+ K R+ + + ++ + E
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y V+ LCK Q +E L+ ++ G P + S V C GK +
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGL 370
LL + +G+ DSF +S++ ++D A++ H++ K +GS D+ TY+ LLDGL
Sbjct: 396 LLEEMSKEGVFPDSFTDASILNALSKAGKVDYALS-HLETMKARGSTPDLVTYNTLLDGL 454
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K GR++EA+ M K S+ I+++ LC + A EM+K G PD
Sbjct: 455 CKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDT 514
Query: 430 ATYKQVISGF 439
Y ++ G
Sbjct: 515 VLYHSLLDGL 524
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 173/440 (39%), Gaps = 52/440 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +LD G + ++ M VP + A + + L + N + A MV
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL----------GLLDSGIY------------SSV 113
G + +S V ILC+ G E G+LD S+
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302
Query: 114 MYNLVIDFYSKK---GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++N +I K D F R+ M P TY+ ++D + ++ + + +
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSM-KEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-------TC 223
V M L P + ++ L +GK RACD E+ + T
Sbjct: 362 VNEMANYGLSPD--VVTYSALVDGLCKLGK-------LDRACDLLEEMSKEGVFPDSFTD 412
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+L ALSK G+V A+ + RG T Y ++ LCK + +E L +V
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
P + + + C G+ + ++ +G+L D+ SL++ N D
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532
Query: 344 AIALHIKIEKLKGSL---DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
A+ L LK SL D + ++LDGL K G+ E+A + + M + + + +++
Sbjct: 533 ALEL------LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYIS 586
Query: 400 VVSRLCHLKELRKAMKNHDE 419
VVS L L ++ KA + D+
Sbjct: 587 VVSGLRKLGKVDKARQLVDD 606
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 36/256 (14%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ M YG P V +AL+D L + ++ A L M ++GV P+ FT + + L
Sbjct: 360 ELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419
Query: 93 CRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
++GK + L L++ V YN ++D K G A L +M + TP
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK-CTPD 478
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-------------------------K 182
+Y+ I+ R + + I MV++ +LP K
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 183 HFLSGNDYVIQK-----LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
L D+V+ K L GK A + +R D T ++ L K G+V
Sbjct: 539 TSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVD 598
Query: 238 EAIQIYHLISERGITV 253
+A Q+ SE +V
Sbjct: 599 KARQLVDDASETHTSV 614
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 15/217 (6%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS +DA +L+ S G L M+ G P + N LLD L + I A
Sbjct: 408 DSFTDAS--ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYS 123
MV +P+ F+++++ LCRSG+ + ++ G+ +V+Y+ ++D +
Sbjct: 466 FLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525
Query: 124 KKGDFGAAFDRL-NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ G A + L +C P F + +LDG + K E + +V M +
Sbjct: 526 RNGLEDLALELLKTSLCK-----PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPAD 580
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
F + V+ L +GK A + A + ++
Sbjct: 581 AFTYIS--VVSGLRKLGKVDKARQLVDDASETHTSVE 615
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 194/458 (42%), Gaps = 35/458 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+ +G ++ ++ MR G P + N + AL + +I AS ++ M
Sbjct: 225 AYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDM 284
Query: 74 VRD---GVS-PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM----YNLVIDFYSKK 125
D G+ PN T++L+ + C G FE + DS S + YN+ + +
Sbjct: 285 QIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRS 344
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A LNEM +N+ P +Y+ ++ G +Y + I+GLM E + P
Sbjct: 345 GKLLEAHLILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVT 403
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ GK A + + TC +L +L KEGR EA + +
Sbjct: 404 YST--LLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM 461
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY------------------- 286
++ERG + + +N LCK ++ ++ + RG
Sbjct: 462 MNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNN 521
Query: 287 ----IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
+P ++ + + C G+ E ++ L ++ K L DS + + YC ++
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A + ++EK + + TY+ L+ GL + ++ E + D MKE + + ++ ++
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S L +L+ A DEML+ G P+ T++ +I F
Sbjct: 642 SCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAF 679
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 181/471 (38%), Gaps = 66/471 (14%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M V P N L+ AL + A ++ M G PN+F+ ++ + C
Sbjct: 140 LYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199
Query: 94 RSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R+G + LLD + + V YN VI +G A ++L E L+P
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEA-EKLVEKMREVGLSPDI 258
Query: 149 STYS----------SILDGARRYEKTEVSDRI---------VGLMVE------------- 176
T++ IL+ +R + ++ + + LM+E
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARA 318
Query: 177 --KKLLPKHFLSGNDYVIQKLSDM--GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
+ LS Y I L + GK A +I ++ I+ + ++ L K
Sbjct: 319 IFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCK 378
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G +A I L+ E G+ Y ++ C+ + E +LR++++ G P
Sbjct: 379 YGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYT 438
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----- 347
+ + S +G+ E E+LL + ++G LD+ C++++ C +DKAI +
Sbjct: 439 CNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMW 498
Query: 348 ------------------HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
I+ K D TY ++ GL K GR++EA + M
Sbjct: 499 TRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGK 558
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+ S F + C +L A + EM K G TY +I G
Sbjct: 559 KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL 609
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 180/452 (39%), Gaps = 45/452 (9%)
Query: 26 GLFMDGLEVYRMMR--VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
GL + + +R +R P +S N L +++ + LY M V P +
Sbjct: 95 GLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTY 154
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVIDFYSKKGDFGAAFDRLNEM 138
T++L+ LC G E + D N +++ Y + G D L+EM
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ L P Y++++ +T ++++V M E L P + + I L
Sbjct: 215 RSSGAL-PNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD--IVTFNCRIAALCKS 271
Query: 199 GKTYAAEMIFK-RACDEKIELQDD---TCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ A IF+ DE++ L T ML+ EG +EA I+ + + T+
Sbjct: 272 GQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLS 330
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y ++ L + + E +L ++ E+ P + V C G + + +L
Sbjct: 331 LRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILG 390
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ + G+ D+ S+L+ YC +I +A + ++ ++ ++ T ++LL L+K+G
Sbjct: 391 LMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEG 450
Query: 375 RMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK---- 426
R EA + M E L V+ ++ +++ LC L KA++ M G
Sbjct: 451 RASEAEDLLQMMNERGYGLDNVTCNT---MINGLCKAGNLDKAIEIVSGMWTRGSASLGN 507
Query: 427 -------------------PDEATYKQVISGF 439
PD TY +I G
Sbjct: 508 LGNSFIDLFDIRNNGKKCLPDSITYATIIGGL 539
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 16 SLVLDC----YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
SL+ D Y +G V + M G ++ N+L+ L +N+I L
Sbjct: 564 SLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMD 623
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKG 126
M G+ PN +T++ + L GK + LLD GI ++ + ++I + K
Sbjct: 624 EMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKAC 683
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
DFGAA E E++ + G H S
Sbjct: 684 DFGAA-----------------------------QELFEIALSLCG----------HKES 704
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
++ +L G+T A+ +F+ A D + L++ +++ L K+G++ +A I H +
Sbjct: 705 LYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764
Query: 247 SERGITVRDSDYYAFVNVLCK 267
++ + + + ++ L K
Sbjct: 765 MDKQYSFDPASFMPVIDELGK 785
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 189/440 (42%), Gaps = 14/440 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
E + V+ CY L GL+++ +R +G P+V N +LDAL QN ++
Sbjct: 103 ENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKM 162
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVID 120
+ LY M +G+ PN FT++++ + LC++GK + LL + G V Y VI
Sbjct: 163 INALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVIS 222
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K GD D+ E+ P Y++++ G + + + + ++ MV++ +
Sbjct: 223 SMCKLGD----VDKAREL--AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + VI LSDMG + +F R T ++K GRV +A+
Sbjct: 277 PN--VISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV 334
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++L+ G++ Y ++ LC + +E + + + P S +
Sbjct: 335 GLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGF 394
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G E + +++ G + + +++ C D+A L + V
Sbjct: 395 AKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTV 454
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
T++ + GL + GR+E A+ + D M++ + + + ++ ++ L R+A E
Sbjct: 455 ITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRE 514
Query: 420 MLKMGHKPDEATYKQVISGF 439
+ + + D TY ++ GF
Sbjct: 515 LEERKVEFDCVTYNTIMYGF 534
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 171/440 (38%), Gaps = 80/440 (18%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + S V+ C S G L V+ M V G P V +L+ + + + A
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDF 121
L+ M+R+GVSPN ++ + LC G + + + DS + Y+ +I
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
++K GD +A + N+M N P Y+ ++D ++ + +
Sbjct: 394 FAKSGDLVSACETWNKMINC-GCRPNVVVYTCMVD----------------VLCQMSMFD 436
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ F D + +SD C + T +K L + GRV+ A+
Sbjct: 437 QAF----DLIDNMISD-------------GCPPTV----ITFNNFIKGLCRAGRVEWAMN 475
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + + Y ++ L + + E CGL+R++ ER + + +
Sbjct: 476 VLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFS 535
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLD 359
G ++V +LL +L G+ LD+ ++ + YC ++ AI + +I EK + D
Sbjct: 536 FNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK-EFRAD 594
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ T+ ++L G+ EEAV E
Sbjct: 595 IITHTIILWGICNWLGTEEAVVYL----------------------------------HE 620
Query: 420 MLKMGHKPDEATYKQVISGF 439
MLK G P+ AT+ ++ GF
Sbjct: 621 MLKRGIFPNIATWNVLVRGF 640
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 18/265 (6%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
KH + +I KL + + ++ E + + ++K + ++ ++
Sbjct: 71 KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLK 130
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+++ I E G Y ++ L ++ + + L ++ G P + + + C
Sbjct: 131 MFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALC 190
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK +LL + +KG D ++++ C +DKA L +K E + V
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPV-----VP 245
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKEL-------KVVSSSSFVIVVSRLCHLKELRKAM 414
Y+ L+ G+ K+ R +EA FD M E+ V+S S+ V+S L + + ++
Sbjct: 246 VYNALIHGVCKECRFKEA---FDLMNEMVDRGVDPNVISYST---VISCLSDMGNVELSL 299
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
M G +P+ T+ +I GF
Sbjct: 300 AVFGRMFVRGCRPNVQTFTSLIKGF 324
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 184/429 (42%), Gaps = 34/429 (7%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
F P+V + NAL+ + + +A + M++ G+ P+ ++++++ LC +G E L
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325
Query: 103 GLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILD 156
+ G+ ++ YN++ + + G A+ + M NG N P TY+ ++
Sbjct: 326 EFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLN--PDLVTYTILIC 383
Query: 157 GARRYEKTEVSDRI----------VGLMVEKKLLPKHFLSGN-DYVIQKLSDM------- 198
G + E S ++ + ++ LL SG D + L +M
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP 443
Query: 199 -------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
G A +++ C ++I C ++ L ++G + EA + +++ +
Sbjct: 444 DLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDV 503
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ K E + ++E+G P + + + C KGK E +
Sbjct: 504 AEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK 563
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
LL + GL+ S ++LM YC + + ++E TY V++ GL
Sbjct: 564 LLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLC 623
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K+GR+ E+V++ YM + ++ V+ C +L+KA + H++ML+ +P
Sbjct: 624 KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 683
Query: 431 TYKQVISGF 439
TY +I+G
Sbjct: 684 TYNVLINGL 692
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 190/473 (40%), Gaps = 65/473 (13%)
Query: 17 LVLDCYSHK---------GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
L+ D YS+ G + LE M +G P + N L + I A
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFY 122
+ M+ +G++P+ T++++ C+ G E L L G+ S V Y +++
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYS--SILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A L+EM L P TYS ++ + YE+ M K++
Sbjct: 421 CKSGRIDEAVILLHEM-EVIGLKPDLLTYSRGAVEEAIELYEE----------MCSKRIY 469
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F+ +I L + G A+M F + + M+ +K G + EA+
Sbjct: 470 PNSFVCSA--IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA---------- 290
+ Y I E+GI+ + + + CK+ + E LL + G +P +
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587
Query: 291 ---------------MELSRFVASQ----------CGKGKWKEVEELLSAVLDKGLLLDS 325
ME +Q C +G+ E +LL + +GL D
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 647
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+++++ +C + KA LH ++ + TY+VL++GL G +++A R+
Sbjct: 648 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 707
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+++ + ++ ++ ++ C +++ A+ +M++ G + Y VI+
Sbjct: 708 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVIN 760
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 138/331 (41%), Gaps = 8/331 (2%)
Query: 58 YRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV---- 113
Y + + A LY M + PN F S + L G DS S V
Sbjct: 448 YSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 507
Query: 114 -MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
+YN++ID Y+K G+ G A ++ + ++P T++S++ G + K + +++
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIE-KGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 566
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
+ L+P ++ + G ++ + + I+ T ++K L K
Sbjct: 567 TIKVHGLVPTSVTYTT--LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCK 624
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
EGR+ E++Q+ + RG+ Y + CK H ++ L +++ P +
Sbjct: 625 EGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVT 684
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C G K+ + LL + D+ + L +++++ +C+ + A+ ++
Sbjct: 685 YNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMV 744
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ + + Y +++ L K + +A F
Sbjct: 745 ERGFEVSIRDYSAVINRLCKRNLITDAKFFF 775
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 182/430 (42%), Gaps = 32/430 (7%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS + D L V M+V +++ N+LL L R +I +Y + GV N
Sbjct: 178 YSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDIMWD--VYNEIKASGVPQN 234
Query: 82 KFTWSLVAQILCRSGKFE-VVLGLLDSG----IYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
++T ++ LCR + + V L ++G S V +N ++ + K G A
Sbjct: 235 EYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
M L P +Y+ +L G E E ++ + VE ++ + L+ ++
Sbjct: 295 MMIK-YGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCG-CMLKALSKEGRVKEAIQIYHLISERGI 251
+S K M+ + + CG C + G ++E+ ++ + +G+
Sbjct: 354 GLISGAWKV-VQRMLLNGLNPDLVTYTILICGHCQM------GNIEESFKLKEKMLSQGL 406
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y ++ LCK + +E LL ++ G P + SR G +E E
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIE 458
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + K + +SF CS+++ I +A + K + ++ Y++++DG
Sbjct: 459 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 518
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G + EAVR + + E K +S + +F ++ C +L +A+K D + G P
Sbjct: 519 KLGNIGEAVRSYKQIIE-KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 577
Query: 430 ATYKQVISGF 439
TY +++G+
Sbjct: 578 VTYTTLMNGY 587
>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
Length = 838
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 202/479 (42%), Gaps = 70/479 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+++ + +G + ++ M YGF ++ + L++ L NE+ A L+ M
Sbjct: 279 TLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDM 338
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGD 127
RD ++P+ + + CR G F V ++ + ++YN+++D G+
Sbjct: 339 KRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINHGE 398
Query: 128 FGAAFDRLNEMCNG------------------RNLTPGFSTYSSILDGARRYEKTEV--- 166
AA+ L+ M G ++ P +++ ++ G + +K ++
Sbjct: 399 VEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALA 458
Query: 167 -SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT--- 222
+ +VGL + KLL ND +++ L + GK A IF + D ++ + T
Sbjct: 459 LTKDMVGLGCKGKLL-----MFNDLILE-LCNSGKLDEAYEIFNQMKDLGLKPSEFTYNS 512
Query: 223 --------------------------------CGCMLKALSKEGRVKEAIQIYHLISERG 250
C M++ L GR+ EA+Q + E G
Sbjct: 513 LLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELG 572
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y A +N +CK E GL D+ + Y+P + + + GK+ E +
Sbjct: 573 FLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQ 632
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
E++ +L KG+L + +++ +C + IDKAI K+ + V TY LLDGL
Sbjct: 633 EIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGL 692
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
GR +EA+ ++ M+E + ++ +V+ LC + A+ ++EM G D
Sbjct: 693 CNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGFDLD 751
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 190/450 (42%), Gaps = 27/450 (6%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L++++ YS G D +E+ M P + L+ L RQ + +A ++G M
Sbjct: 245 LTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMA 304
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDFYSKKGDFG 129
G S + +S++ + LC + + L + + ++ +I+ + ++GDF
Sbjct: 305 SYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFS 364
Query: 130 AAFDRLNEMCNGRNLTPGFST--YSSILDGARRYEKTEVSDRIVGLMV--EKKLLPKHFL 185
+NE N +L PG + Y+ ILDG + + E + +++ MV ++++ +
Sbjct: 365 TVGPFINE--NAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDTV 422
Query: 186 SGNDYVI----QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA-----------L 230
+ +VI + SD + + D + L D G K L
Sbjct: 423 GVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILEL 482
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
G++ EA +I++ + + G+ + Y + + +C+ LLR++ + P
Sbjct: 483 CNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWI 542
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ V C G+ E + L +L+ G L D S+ M C I+ A+ L +
Sbjct: 543 KNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLD 602
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
I DV +++L++G K G+ +EA I + M ++ S ++ +++ C
Sbjct: 603 ISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGS 662
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ KA+ +M+ P TY ++ G
Sbjct: 663 IDKAITCVYKMIDEEKPPTVVTYTSLLDGL 692
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 8/260 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ R MR P + C ++ L I A M+ G P+ T+S +
Sbjct: 528 DLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGM 587
Query: 93 CRSGKFEVVLGL---LDSGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G E LGL + S Y V +N++I+ + K G F A + + EM + + + P
Sbjct: 588 CKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLS-KGMLPS 646
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+ ++D + + + V M++++ P + ++ L + G+ A ++
Sbjct: 647 VVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPT--VVTYTSLLDGLCNAGRPDEAIVL 704
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ + ++ ++ L K GR++ A+ Y + +G + N+L
Sbjct: 705 WCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGFDLDIFSLLNLTNLLIA 764
Query: 268 EHQPEEVCGLLRDVVERGYI 287
+ Q + C LL+ V+++ +
Sbjct: 765 QGQASKGCELLKVVLQKDVV 784
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS--DYYAFVNVL---CKEHQPEEVCG 276
T C+L AL+K GR ++A + E +T D D Y ++L C +PE+
Sbjct: 173 TYNCLLDALAKAGRAEDA---EARLQEMVVTCGDESVDRYTLTSLLQCYCNAGRPEDASA 229
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+L+ + +R ++ + L+ + + GK ++ ELL + + + S L+
Sbjct: 230 VLQRMSKRAWVDEHV-LTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLA 288
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
++D A+ + K+ S+D+A Y VL++GL M +AV++F+ MK ++
Sbjct: 289 RQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITP 345
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 124/331 (37%), Gaps = 47/331 (14%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
+ G + E++ M+ G P+ N+LL + R+ + A+ L M + P
Sbjct: 484 NSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIK 543
Query: 84 TWSLVAQILCRSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEM 138
+ + Q LC SG+ L G+L+ G V Y+ ++ K GD A ++
Sbjct: 544 NCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDI 603
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ + P ++ +++G R+ K + + I+ M+ K +LP
Sbjct: 604 -SSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVV-------------- 648
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ-IYHLI-SERGITVRDS 256
T M+ K G + +AI +Y +I E+ TV
Sbjct: 649 -----------------------TYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTV--V 683
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + ++ LC +P+E L + E+G P + + V C G+ + +
Sbjct: 684 TYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEM 743
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
KG LD F +L + Q K L
Sbjct: 744 KTKGFDLDIFSLLNLTNLLIAQGQASKGCEL 774
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 202/448 (45%), Gaps = 48/448 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EVY +M G P V N +LD+ ++ ++ A L M G SPN T++++ L
Sbjct: 188 EVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGL 247
Query: 93 CRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
SG+ E++ +L G+ SV Y+ +I Y +KG A RL E R P
Sbjct: 248 SHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEA-SRLGEEMLSRGAVPT 306
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND--YVIQKLSDMGKTYA-- 203
TY++I+ G ++ + + +++ +MV K L+P +S N Y +L ++G+ +
Sbjct: 307 VVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD-LVSYNTLIYGYTRLGNIGEAFLLF 365
Query: 204 AEMIFK--------------------------RACDEKIELQDD----TCGCMLKALSKE 233
AE+ ++ R DE I+ D T ++ K
Sbjct: 366 AELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKM 425
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ---PEEVCGLLRDVVERGYIPCA 290
G + A +++ + RG+ D +A++ + E + P + G+ +++ RG+ P
Sbjct: 426 GNLPMAKELFDEMLNRGL---QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 482
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + F+ G KE EL+ +L GL+ D +S++ + + KA AL ++
Sbjct: 483 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLE 542
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ V TY VL+ GR++ A+ F M E V + ++ +++ LC +++
Sbjct: 543 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 602
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +A EM G P++ TY +I+
Sbjct: 603 MDQAYNFFAEMQAKGISPNKYTYTILIN 630
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 14/333 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ G + ++ +R P+V N L+D L R ++ +A L M++ G P+
Sbjct: 352 YTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPD 411
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLN 136
FT++ + C+ G + L D + + Y I K GD AF
Sbjct: 412 VFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 471
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM R P TY+ +DG + + + +V M+ L+P H + +I
Sbjct: 472 EML-ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTS--IIHAHL 528
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A +F + I T ++ + + GR+K AI + + E+G+
Sbjct: 529 MAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 588
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A +N LCK + ++ ++ +G P + + C G W+E L +
Sbjct: 589 TYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM 648
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
LD+ + DS SL+ + ++K LH+
Sbjct: 649 LDREIQPDSCTHRSLL------KHLNKDYKLHV 675
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
D T ++ LS G +++A ++ + G+ V Y + C++ Q EE L
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+++ RG +P + + + C G+ + +LL +++K L+ D ++L+ Y
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 355
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSF 397
I +A L ++ + V TY+ L+DGL + G ++ A+R+ D M K +F
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
V C + L A + DEML G +PD Y I G
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ML + K+G V+EA+Q+ + G + D Y VN L + E+ L++D+
Sbjct: 204 TYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM 263
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G + C KG+ +E L +L +G + +++M C ++
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
A L + D+ +Y+ L+ G + G + EA +F ++ + S ++ +
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC L +L AM+ DEM+K G PD T+ + GF
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGF 422
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 195/445 (43%), Gaps = 28/445 (6%)
Query: 14 ALSLVL-DCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
LSL L +C + + + +M +P +S+ N LL L + N LY
Sbjct: 57 PLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNE 116
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSG-IYSSVMYNLVIDFYSKKGD 127
M G+SP+ FT S++A LC + L G+L G I + V Y +I +
Sbjct: 117 MRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHR 176
Query: 128 FGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A F R+ ++ TP TY +++ G + + + L + K++L
Sbjct: 177 ISEATRLFLRMQKL----GCTPNAVTYGTLIKGL-----CQTGNVNIALKLHKEMLNDAS 227
Query: 185 LSGND---------YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
G + +I L +G+ A+ +F+ + + + ++ G+
Sbjct: 228 QYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGK 287
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++ ++ + ++G+ + ++ LCKE + E LL +++RG +P + +
Sbjct: 288 WDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNS 347
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G EL ++ KGL D ++L+ YC ++ +A+ L+ ++ ++
Sbjct: 348 LIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG 407
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAM 414
S +V TY LL GLF+ G++ +A ++F MK V ++S + I + LC L +AM
Sbjct: 408 KSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAM 467
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ +E+ K + Y +I G
Sbjct: 468 ELFNELKSYNFKLNIENYSCLIDGL 492
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 174/403 (43%), Gaps = 44/403 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D G + E++ M+ G +P V + + L+ + + L+ MV
Sbjct: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD 300
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGA 130
GV P+ T+S++ LC+ GK LL+ GI + + YN +ID + GD +
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M + L P +Y+++++G + K + + + M++
Sbjct: 361 ARELFLSM-PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ-------------- 405
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+GK+ T G +LK L ++G+V +A +++ ++ G
Sbjct: 406 -------VGKSPNV----------------TTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
++ Y F++ LCK E L ++ + S + C GK +
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL + +GL D + ++ +C Q+D A L K+E+ + D+ Y+ LL G
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRK 412
+ ++EE +++ M + V +++S IVV LC ++ +K
Sbjct: 563 CEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKK 605
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 41/312 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
G P + + L+D L ++ ++ A L M++ G+ PN T++ + C G
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361
Query: 99 -EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSIL 155
E+ L + G+ + Y +I+ Y K A + NEM G+ +P +TY ++L
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGK--SPNVTTYGTLL 419
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSG---NDYV---------------- 191
G + K + ++ G+M + FL G ND +
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFK 479
Query: 192 ---------IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
I L GK A +F++ E ++ T M+ K G+V A +
Sbjct: 480 LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANIL 539
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + E G T Y + C+ ++ EEV LL +V++ P A + V C
Sbjct: 540 FEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
Query: 303 KGKWKEVEELLS 314
K+K+ +LL
Sbjct: 600 DEKYKKFVDLLP 611
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/273 (17%), Positives = 107/273 (39%), Gaps = 33/273 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + +++ Y + + +Y M G P V+ LL L+++ ++
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGD 430
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+G M GVS N S +Y + +D K
Sbjct: 431 AKKLFGVMKTYGVSAN------------------------------SQIYGIFLDGLCKN 460
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A + NE+ N YS ++DG + K E + + + ++ L P +
Sbjct: 461 DCLFEAMELFNEL-KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPD--V 517
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I +G+ A ++F++ + +L + +++E I++ H
Sbjct: 518 VTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHK 577
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+ ++ ++ + V++LCK+ + ++ LL
Sbjct: 578 MVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 166/344 (48%), Gaps = 6/344 (1%)
Query: 99 EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E+V+ + + G+ S N V+ ++ G A + +EMC R + P +Y ++ G
Sbjct: 153 EMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMC-ARGVQPNCVSYRVMVVG 211
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ SDR +G M+E+ + + + ++++ + G A F+R C+ +
Sbjct: 212 YCKLGNVLESDRWLGGMIERGFVVDN--ATLSLIVREFCEKGFVTRALWYFRRFCEMGLR 269
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
CM++ L K G VK+A ++ + RG + A ++ LCK+ E+ L
Sbjct: 270 PNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRL 329
Query: 278 -LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L+ V + P + + ++ C K E LLS + ++GL ++ ++L++ +C
Sbjct: 330 FLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHC 389
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY-MKELKVVSSS 395
++A L + + S +V TY+ ++DGL K GR++EA ++ +
Sbjct: 390 KAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKV 449
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++S C E+++A+ ++M+K G +PD +Y +I+ F
Sbjct: 450 TYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVF 493
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 182/441 (41%), Gaps = 16/441 (3%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+ + + ++ ++ G + +E+ M G P+ N ++ + + A
Sbjct: 129 EKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAEN 188
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYS 123
L+ M GV PN ++ ++ C+ G + G+++ G + + +L++ +
Sbjct: 189 LFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFC 248
Query: 124 KKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+KG A F R EM L P ++ +++G + + + ++ MV +
Sbjct: 249 EKGFVTRALWYFRRFCEM----GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWK 304
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + +I L G T A +F K E + T M+ ++ ++ A
Sbjct: 305 PNVY--THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + E+G+ + Y ++ CK E L+ + E G+ P + V
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C KG+ +E ++L + GL D + L+ +C +I +A+ L K+ K D
Sbjct: 423 LCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPD 482
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
+ +Y L+ ++ RM+E+ F+ +V ++ ++ ++ C LR A+K
Sbjct: 483 IHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFH 542
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M G D TY +ISG
Sbjct: 543 RMSDHGCASDSITYGALISGL 563
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 142/341 (41%), Gaps = 9/341 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LSL++ + KG L +R G P + +++ L ++ ++ A + M
Sbjct: 239 TLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM 298
Query: 74 VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGD 127
V G PN +T + + LC+ G F + L L+ S + + Y +I Y +
Sbjct: 299 VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEK 358
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A L+ M + L P +TY++++DG + E + ++ +M E+ P +
Sbjct: 359 MNRAEMLLSRM-KEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPN--VCT 415
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ L G+ A + K ++ T ++ K+ +K+A+ +++ +
Sbjct: 416 YNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMV 475
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ GI Y + V C+E + +E + V G +P + + C +G +
Sbjct: 476 KSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLR 535
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + D G DS +L+ C ++D+A L+
Sbjct: 536 LALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLY 576
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 11/319 (3%)
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAA 131
G+ PN ++ + + LC+ G FE++ ++ G +V + +ID KKG A
Sbjct: 267 GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKA 326
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY- 190
F ++ N P TY++++ G R EK ++ ++ M E+ L P + N Y
Sbjct: 327 FRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAP----NTNTYT 382
Query: 191 -VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A + +E T ++ L K+GRV+EA ++
Sbjct: 383 TLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRN 442
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y ++ CK+ + ++ L +V+ G P + +A C + + KE
Sbjct: 443 GLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKES 502
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E + GL+ + +S++ YC + A+ ++ + D TY L+ G
Sbjct: 503 EMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISG 562
Query: 370 LFKDGRMEEAVRIFDYMKE 388
L K +++EA ++D M E
Sbjct: 563 LCKQSKLDEARCLYDAMIE 581
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 167/395 (42%), Gaps = 53/395 (13%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-DGVSPNKF 83
+G E+ M G+ P V AL+D L ++ A L+ +VR + PN
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344
Query: 84 TWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + CR K LL + G+ + Y +ID + K G+F A++ +N M
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV------GLMVEKK-------------- 178
N +P TY++I+DG + + + + +++ GL +K
Sbjct: 405 -NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAE 463
Query: 179 ------LLPKHFLSGNDYVIQKLSDMGKTYA-------AEMIFKRACDEKIELQDDTCGC 225
L K SG I + + + +EM F+ A + + T
Sbjct: 464 IKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTS 523
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
M+ +EG ++ A++ +H +S+ G Y A ++ LCK+ + +E L ++E+G
Sbjct: 524 MICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKG 583
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAV-----LDKGLLLDSFCCSSLMEYYCSNRQ 340
PC E++R + ++ ++++ SA+ L+K L + + ++L+ CS R+
Sbjct: 584 LTPC--EVTRVTLAY----EYCKIDDGCSAMVVLERLEKKLWVRTV--NTLVRKLCSERK 635
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ A K+ +++ T + ++ +
Sbjct: 636 VGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNK 670
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 47/268 (17%)
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ E + CM+K+ ++ GRVKEAI++ + +G+ V ++ + E
Sbjct: 125 NKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVE 184
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L ++ RG P + V C G E + L ++++G ++D+ S ++
Sbjct: 185 YAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIV 244
Query: 333 EYYCSNRQIDKA----------------IALHIKIEKL--KGSL---------------- 358
+C + +A I IE L +GS+
Sbjct: 245 REFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWK 304
Query: 359 -DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-------SFVIVVSRLCHLKEL 410
+V T+ L+DGL K G E+A R+F LK+V S ++ ++S C +++
Sbjct: 305 PNVYTHTALIDGLCKKGWTEKAFRLF-----LKLVRSENHKPNVLTYTAMISGYCRDEKM 359
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISG 438
+A M + G P+ TY +I G
Sbjct: 360 NRAEMLLSRMKEQGLAPNTNTYTTLIDG 387
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 33/247 (13%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++ + ++D + G F E+ +M GF P V NA++D L ++ ++
Sbjct: 372 QGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQE 431
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + + R+G+ +K T++++ C+ + + L L + + S +
Sbjct: 432 AYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQ----------- 480
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
P +Y++++ R ++ + S+ V L+P +
Sbjct: 481 --------------------PDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTN-- 518
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I G A F R D T G ++ L K+ ++ EA +Y
Sbjct: 519 KTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDA 578
Query: 246 ISERGIT 252
+ E+G+T
Sbjct: 579 MIEKGLT 585
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 198/453 (43%), Gaps = 57/453 (12%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+E++ M G P + + N ++ L +++ A + +M+ +G P+ ++ +
Sbjct: 39 AIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIH 98
Query: 91 ILCRSGKFEVVLGLLDSGI----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C++G+ +V LL+ + +Y VI Y K GD F L EM P
Sbjct: 99 GFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEML-AAGCIP 157
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV-----IQKLSDMGKT 201
+ Y ++D + + + + + M + L DYV I+ LS+ GK
Sbjct: 158 DAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCL-------GDYVTFMTLIEALSNHGKL 210
Query: 202 YAA-----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
A EMI +R + +E+QD ++ AL K G+V EA +IY + + +
Sbjct: 211 DEACELYREMI-ERGYEPYLEVQDS----LIFALCKAGKVDEANEIYQTVVAKKVATSRV 265
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC-------------------AMELSRFV 297
Y + ++ CK + ++ LL +VE P A+EL + +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLL----------LDSFCCSSLMEYYCSNRQIDKAIAL 347
+S K ++ + D + LD +++++ +++ID+A L
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACEL 385
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
K++ S +V Y ++DGL K GR+E+ ++ F+ M V + +++ +V+ LC
Sbjct: 386 FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCK 445
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L A K ++M++ G PD TY +I GF
Sbjct: 446 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 478
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 186/454 (40%), Gaps = 45/454 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC------------- 68
+S D LE+++++ YG P + ++ LY + A
Sbjct: 309 FSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTT 368
Query: 69 ----------------LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----S 107
L+ + G SPN ++ V L ++G+ E L + S
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428
Query: 108 GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ + Y +VID K A +M + P TY++++DG + K + +
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKASKMDEA 487
Query: 168 DRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+++ +M+ K P G + + + + K A+M +R C+ + +
Sbjct: 488 RKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTS--- 543
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
+L +GR +EA Q+ ++ RG Y + +++L + E + ++E+
Sbjct: 544 -LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P A+ + + G + E+L + G+ D F +SLM+ Y ++D+A
Sbjct: 603 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 662
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVS 402
++ ++ + T++VL+ GLFKDG+ + A +F M E V + S+ I++
Sbjct: 663 FGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILID 722
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
L + +A EM+ G P+ TY +I
Sbjct: 723 GLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 168/416 (40%), Gaps = 51/416 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+ + M G +P V CN +L+ L + +I A L+ M G P +++ V
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 90 QILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L K ++ ++D+G V+ + +I + K G LN+ +
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL--KRF 120
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y+S++ G + + +I+ M+ +P AA
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDA-------------------AA 161
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ ++ L K GRV EA +++ + + G + +
Sbjct: 162 YFV------------------LIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L + +E C L R+++ERGY P + + C GK E E+ V+ K +
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATS 263
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+SLM+ YC ++D + L +++ + D+ TY++L+ G + R+++A+ +F
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK 323
Query: 385 YMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +++++ ++ L + + +A DE L D +Y VI G
Sbjct: 324 LLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGL 373
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 191/497 (38%), Gaps = 73/497 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A +++D G + E++ MR G + L++AL ++ A LY M
Sbjct: 161 AYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
+ G P + LC++GK E+ ++ + +S V YN ++D Y K G
Sbjct: 221 IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRV 280
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
L +M N P TY+ ++ G R + + + + L+ P +
Sbjct: 281 DDGLKLLLQMVECDNF-PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA--ATY 337
Query: 189 DYVIQKLSDMGKTYAAEMIFKRA------------------CDEKIELQD--DTCGC--- 225
+IQ L D + A+ F A DE EL + T GC
Sbjct: 338 TTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPN 397
Query: 226 ------MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L K GR+++ ++ + +S + Y ++ LCK + C +
Sbjct: 398 VVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFE 457
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL---------LLDSFC--- 327
+V++G +P + + + K E +LL +L KG ++ FC
Sbjct: 458 QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLD 517
Query: 328 ----------------C-------SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
C +SL+ YY S + ++A + ++ + DV Y
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYT 577
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+D LF GR+ EA +FD M E + ++ ++ + + A + + M K
Sbjct: 578 SLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKS 637
Query: 424 GHKPDEATYKQVISGFM 440
G PD Y ++ G++
Sbjct: 638 GVGPDCFAYNSLMDGYV 654
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 180/434 (41%), Gaps = 45/434 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+D G DGL+ + M VP + ++D L + + A ++ M
Sbjct: 400 AYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM 459
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
V+ G P+ T++ + ++ K + LLD + ++V Y ++ + K
Sbjct: 460 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 519
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + +M R PG ++S+L + E + +++ M + P L +
Sbjct: 520 NEAKEVIAQM-RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 578
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I L G+ A +F ++ T G +++ SK G V+ A +I L+++
Sbjct: 579 --LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y + ++ K + ++ G+ +V G P A+ +
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN-------------- 682
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK-IEKLKGSLDVATYDVLL 367
VL GL D + D+A +L + +EK + + +Y +L+
Sbjct: 683 -------VLMHGLFKDG--------------KTDRAFSLFKEMLEKDEVPPTLVSYTILI 721
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DGL K GR+ EA F M + ++ ++ ++ L + +A K ++M+K+G
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781
Query: 427 PDEATYKQVISGFM 440
PD Y +I+G +
Sbjct: 782 PDVQAYSALITGLI 795
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+E + L + GL+ D C+ ++ C R+IDKAI L +++ + + +Y+ +
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 367 LDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ GL +M+EA + F+ M E V+ +F ++ C + + ++ LK
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVI---AFTTLIHGFCKAGQPQVGHMLLNQALK 118
Query: 423 MGHKPDEATYKQVISGF 439
+PD Y VI G+
Sbjct: 119 R-FRPDVFLYTSVIHGY 134
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 198/455 (43%), Gaps = 50/455 (10%)
Query: 32 LEVYRMMRVYG------FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
L + M RVY VP + N +++A + I A+ + + G+SP+ FT+
Sbjct: 193 LMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTY 252
Query: 86 SLVAQILCRSGKFE-----------------------VVLGL-----LDSGI-------- 109
+ + CR+ ++ GL +D GI
Sbjct: 253 TSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMRE 312
Query: 110 ---YSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
Y +V Y ++I D NEM R+ P TY+ ++D + K +
Sbjct: 313 DDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM-RERSCEPNVHTYTVMVDAMCKERKLD 371
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
S RI+ M+EK L+P + + +I+ + G+ AA I + T
Sbjct: 372 ESRRILNEMMEKGLVPS--VVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNE 429
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ SK V +A+ + + E +T Y + ++V CK + LL + E G
Sbjct: 430 LICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+P S F+ + C + +E +L +++ +KG+ + ++L++ +C +ID+AI
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAI 549
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
+L ++ + +TY+ L+ G+ K+G+++E + + + M ++ V + +++ I++ +
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A + ++M+ GHKPD TY I +
Sbjct: 610 LREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 173/419 (41%), Gaps = 50/419 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G+ +++ MR P V ++ AL+ + L+ M PN T++++
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMV 361
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+C+ K + ++ +++ G+ SV+ YN +I Y ++G AA + L M N
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM-ESNNC 420
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY+ ++ G + + + ++ M+E KL P
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV-------------------- 460
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
T ++ K G A ++ L+ E G+ Y F++
Sbjct: 461 -----------------TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + EE C L + E+G + + + C GK E LL + + L +
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S +SL+ C ++ + +++ + K+ VATY +L++ + ++G + A R+F+
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFN 623
Query: 385 YM----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + V + ++F+ ++KE M M++ G PD TY +IS +
Sbjct: 624 QMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA---RMIEAGVMPDSLTYTLLISAY 679
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 159/363 (43%), Gaps = 8/363 (2%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
++G++++ MR P V ++DA+ ++ ++ + + M+ G+ P+ T++ +
Sbjct: 336 LEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNAL 395
Query: 89 AQILCRSGKFEV---VLGLLDSGI--YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+ C G+ E +LGL++S + YN +I +SK+ A L++M +
Sbjct: 396 IRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK- 454
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
LTP TY+S++ + + + +++ L+ E L+P + I L +
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS--VFIDTLCKSKRMEE 512
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A +F ++ I+ + ++ K G++ EAI + + S Y + +
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+CKE + +E ++ ++ + G P + + +G + + + ++ G
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D + ++ + YC++ + +A + ++ + D TY +L+ + G +A +
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692
Query: 384 DYM 386
M
Sbjct: 693 KRM 695
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G +GL + M G P V+ L++ + R+ + A+ ++ MV G P+ +T
Sbjct: 577 EGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYT 636
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMC 139
++ C SG + G++ I + VM Y L+I Y + G AF+ L M
Sbjct: 637 YTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRML 696
Query: 140 NG 141
+
Sbjct: 697 DA 698
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 194/420 (46%), Gaps = 28/420 (6%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V ++ G VP V N L+ + EI A L M VSP+ T++ + + LC
Sbjct: 167 VMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLC 223
Query: 94 RSGKFEVVLGLLDSGI----YSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
SGK + + +LD + Y V+ Y ++I+ K+ G A L+EM + P
Sbjct: 224 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM-RDKGCKPDV 282
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK-----TYA 203
TY+ +++G + + + + R + M P + ++ +++ + G+ +
Sbjct: 283 VTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN--VITHNIILRSMCSTGRWMDAEKFL 340
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
AEMI ++ C + T ++ L ++G + AI + + + G T Y ++
Sbjct: 341 AEMI-RKGCSPSVV----TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK+ + E L +V RG P + + + + C GK E+L+ + KG
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAV 380
+++++ + D AI L ++++KG D+ TY L+ GL ++G+++EA+
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKL---LDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F ++E+ V ++ ++ ++ LC ++ +A+ M+ G KP E +Y +I G
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 162/395 (41%), Gaps = 47/395 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLD 106
N L L R E+ MV G P+ + + + LC++GK V+ L D
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
SG V+ YN++I Y K G+ G+A L+ M +++P TY++IL
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM----SVSPDVVTYNTIL---------- 219
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ L D GK A + R + T
Sbjct: 220 ---------------------------RTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 252
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++A KE V +A+++ + ++G Y +N +CKE + +E L + G
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + S C G+W + E+ L+ ++ KG + L+ + C I +AI
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
+ K+ + + + +Y+ LL L KD +ME A+ D M ++ +++ L
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ A++ +++ G P TY VI G
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 8/306 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + + M YG P V N +L ++ A M+R G SP+ T
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354
Query: 85 WSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++++ LCR G + +L+ +S+ YN ++ K A + L+ M
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ R P TY+++L + K +V+ I+ + K P L + VI LS +G
Sbjct: 415 S-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP--VLITYNTVIDGLSKVG 471
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
KT A + + ++ T ++ LS+EG+V EAI +H + E G+ Y
Sbjct: 472 KTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYN 531
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ + LCK Q L +V RG P + +G KE ELL+ + +
Sbjct: 532 SIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSR 591
Query: 320 GLLLDS 325
G++ S
Sbjct: 592 GVVKKS 597
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 8/256 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ KGL ++V M +G P + N LL AL + ++ A M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIYSSVM--YNLVIDFYSKKGDF 128
V G P+ T++ + LC+ GK +V +L L S S V+ YN VID SK G
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+EM G+ L P TYS+++ G R K + + + E + P +
Sbjct: 474 DDAIKLLDEM-KGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L +T A + + + +++ L+ EG KEA+++ + +
Sbjct: 533 --IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCS 590
Query: 249 RGITVRDSDYYAFVNV 264
RG+ + S V +
Sbjct: 591 RGVVKKSSAEQVVVKI 606
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 194/458 (42%), Gaps = 35/458 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+ +G ++ ++ MR G P + N + AL + +I AS ++ M
Sbjct: 225 AYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDM 284
Query: 74 VRD---GVS-PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM----YNLVIDFYSKK 125
D G+ PN T++L+ + C G FE + DS S + YN+ + +
Sbjct: 285 QIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRS 344
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A LNEM +N+ P +Y+ ++ G +Y + I+GLM E + P
Sbjct: 345 GKLLEAHLILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVT 403
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ GK A + + TC +L +L KEGR EA + +
Sbjct: 404 YST--LLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM 461
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY------------------- 286
++ERG + + +N LCK ++ ++ + RG
Sbjct: 462 MNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNN 521
Query: 287 ----IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
+P ++ + + C G+ E ++ L ++ K L DS + + YC ++
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A + ++EK + + TY+ L+ GL + ++ E + D MKE + + ++ ++
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S L +L+ A DEML+ G P+ T++ +I F
Sbjct: 642 SCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAF 679
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 180/471 (38%), Gaps = 66/471 (14%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M V P N L+ AL + A ++ M G PN+F+ ++ + C
Sbjct: 140 LYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199
Query: 94 RSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R+G + LLD + + V YN VI +G A ++L E L+P
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEA-EKLVEKMREVGLSPDI 258
Query: 149 STYS----------SILDGARRYEKTEVSDRI---------VGLMVE------------- 176
T++ IL+ +R + ++ + + LM+E
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARA 318
Query: 177 --KKLLPKHFLSGNDYVIQKLS--DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
+ LS Y I L GK A +I ++ I+ + ++ L K
Sbjct: 319 IFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCK 378
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G +A I L+ E G+ Y ++ C+ + E +LR++++ G P
Sbjct: 379 YGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYT 438
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----- 347
+ + S +G+ E E+LL + ++G LD+ C++++ C +DKAI +
Sbjct: 439 CNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMW 498
Query: 348 ------------------HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
I+ K D TY ++ GL K GR++EA + M
Sbjct: 499 TRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGK 558
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+ S F + C +L A + EM K G TY +I G
Sbjct: 559 KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL 609
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 180/452 (39%), Gaps = 45/452 (9%)
Query: 26 GLFMDGLEVYRMMR--VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
GL + + +R +R P +S N L +++ + LY M V P +
Sbjct: 95 GLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTY 154
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVIDFYSKKGDFGAAFDRLNEM 138
T++L+ LC G E + D N +++ Y + G D L+EM
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ L P Y++++ +T ++++V M E L P + + I L
Sbjct: 215 RSSGAL-PNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD--IVTFNCRIAALCKS 271
Query: 199 GKTYAAEMIFK-RACDEKIELQDD---TCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ A IF+ DE++ L T ML+ EG +EA I+ + + T+
Sbjct: 272 GQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLS 330
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y ++ L + + E +L ++ E+ P + V C G + + +L
Sbjct: 331 LRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILG 390
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ + G+ D+ S+L+ YC +I +A + ++ ++ ++ T ++LL L+K+G
Sbjct: 391 LMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEG 450
Query: 375 RMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK---- 426
R EA + M E L V+ ++ +++ LC L KA++ M G
Sbjct: 451 RASEAEDLLQMMNERGYGLDNVTCNT---MINGLCKAGNLDKAIEIVSGMWTRGSASLGN 507
Query: 427 -------------------PDEATYKQVISGF 439
PD TY +I G
Sbjct: 508 LGNSFIDLFDIRNNGKKCLPDSITYATIIGGL 539
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 16 SLVLDC----YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
SL+ D Y +G V + M G ++ N+L+ L +N+I L
Sbjct: 564 SLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMD 623
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKG 126
M G+ PN +T++ + L GK + LLD GI ++ + ++I + K
Sbjct: 624 EMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKAC 683
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
DFGAA E E++ + G H S
Sbjct: 684 DFGAA-----------------------------QELFEIALSLCG----------HKES 704
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
++ +L G+T A+ +F+ A D + L++ +++ L K+G++ +A I H +
Sbjct: 705 LYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764
Query: 247 SERGITVRDSDYYAFVNVLCK 267
++ + + + ++ L K
Sbjct: 765 MDKQYSFDPASFMPVIDELGK 785
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 199/456 (43%), Gaps = 32/456 (7%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEI 63
CE R + ++ Y L L+++ RM + V + N +L+ + ++
Sbjct: 93 CENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCF 152
Query: 64 RLASCLYGAMVRDG----VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG------I 109
LA Y ++ + PN +++LV + LCR G EV G+ D
Sbjct: 153 DLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYT 212
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
YS++M+ L +G A L+EM P ++ ++ + + +
Sbjct: 213 YSTLMHGLC-----NEGRIDEAVSLLDEM-QVEGTFPNPVAFNVLISALCKKGDLSRASK 266
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+V M K +P + ++ L GK A + R K D T G ++
Sbjct: 267 LVDNMFLKGCVPNEVTYNS--LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDG 324
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K GR + +++ + E+G + Y + ++ L KE + E L +++VE+G P
Sbjct: 325 FVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPN 384
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ S + C +GK E +E L + +KG +SF SSLM Y I KAI +
Sbjct: 385 TIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWK 444
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLC 405
++ + Y +L++GL K+G+++EA+ ++ M +L VV+ SS ++ C
Sbjct: 445 EMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSS---MIHGFC 501
Query: 406 HLKELRKAMKNHDEMLKMGHK--PDEATYKQVISGF 439
+ + + + MK ++ML K PD TY +++ F
Sbjct: 502 NAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 537
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 168/419 (40%), Gaps = 49/419 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMM----RVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ + VL+ +G F LE Y + P + N ++ AL R + A +
Sbjct: 138 SFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEV 197
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSK 124
+ M + +T+S + LC G+ + + LLD G + + V +N++I K
Sbjct: 198 FRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCK 257
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
KGD A ++ M + P TY+S++ G K + + ++ MV K +P
Sbjct: 258 KGDLSRASKLVDNMF-LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI 316
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
G ++ G+ + ++ + + ++ L KEG+ + +Q++
Sbjct: 317 TFGT--LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWK 374
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF-------- 296
+ E+G Y A ++ LC+E +P+E L ++ +G+ P + S
Sbjct: 375 EMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAG 434
Query: 297 ---------------------------VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ C GK KE + +L +G+ LD S
Sbjct: 435 DIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYS 494
Query: 330 SLMEYYCSNRQIDKAIALHIKI--EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S++ +C+ + +++ + L ++ K DV TY++LL+ + A+ I + M
Sbjct: 495 SMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTM 553
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 112/247 (45%), Gaps = 9/247 (3%)
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI-SERGITVRDSDYY 259
T +++ + C+ ++ ++ M KA K ++A+ ++H + +E +
Sbjct: 82 TSLEQLLHQMKCENRVFIEKSFI-IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFN 140
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYI----PCAMELSRFVASQCGKGKWKEVEELLSA 315
+NV+ +E + V++ P + + + + C G + E+
Sbjct: 141 TVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRG 200
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ D+ + D + S+LM C+ +ID+A++L +++ + ++VL+ L K G
Sbjct: 201 MSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGD 260
Query: 376 MEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+ A ++ D M LK V + ++ +V LC +L KAM + M+ P++ T+
Sbjct: 261 LSRASKLVDNM-FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFG 319
Query: 434 QVISGFM 440
++ GF+
Sbjct: 320 TLVDGFV 326
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 185/432 (42%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS++++C+ H+ V+ + GF P N L+ L + EI+ A + +
Sbjct: 94 TLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQL 153
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
V G ++ ++ + LC++G+ + V LL S VMYN +I+ K
Sbjct: 154 VAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL 213
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G A D +EM + ++P TY++++ G + + ++ M K + P +
Sbjct: 214 GDACDVYSEMI-VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN--VCTF 270
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I LS GK A+++ I+ T ++ VK A +++ +++
Sbjct: 271 NILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+T Y +N LCK +E L ++ + IP
Sbjct: 331 RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIP-------------------- 370
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
D +SL++ C N +++AIAL ++++ DV +Y +LLD
Sbjct: 371 ---------------DIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLD 415
Query: 369 GLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+E+A IF + + ++ ++ ++++RLC +A+ +M G P
Sbjct: 416 GLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMP 475
Query: 428 DEATYKQVISGF 439
D T+ +I
Sbjct: 476 DAVTFDIIIRAL 487
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 144/329 (43%), Gaps = 10/329 (3%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ EG + D + + +++ L D +VY M V G P V L+
Sbjct: 184 LLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFC 243
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLG-LLDSGIYSSVM 114
++ A L M ++PN T++++ L + GK + ++L ++ + I V
Sbjct: 244 IMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVF 303
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +ID Y + A M R +TP Y+++++G + + + + +
Sbjct: 304 TYNSLIDGYFLVDEVKHAKYVFYSMAQ-RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEE 362
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M K ++P + + +I L A + KR ++ I+ + +L L K
Sbjct: 363 MKHKNMIPD--IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKS 420
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
GR+++A +I+ + +G + Y +N LCK +E L + ++G +P A+
Sbjct: 421 GRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTF 480
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ + K + + E++L ++ +GLL
Sbjct: 481 DIIIRALFEKDENDKAEKILREMIARGLL 509
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 97/251 (38%), Gaps = 38/251 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L +L I ++ GIT +N C + + ++++RG
Sbjct: 63 ILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRG 122
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P A+ L+ + C +G+ K+ ++ +G LD +L+ C +
Sbjct: 123 FHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVA 182
Query: 346 ALHIKIE---------------------KLKG--------------SLDVATYDVLLDGL 370
L K+E KL G S DV TY L+ G
Sbjct: 183 RLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGF 242
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
G ++EA + + MK LK ++ + +F I++ L ++++A M+K KPD
Sbjct: 243 CIMGHLKEAFSLLNEMK-LKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPD 301
Query: 429 EATYKQVISGF 439
TY +I G+
Sbjct: 302 VFTYNSLIDGY 312
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 196/466 (42%), Gaps = 43/466 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAM 73
S++L + L++++MM G P V A N ++ +++ E A L+ M
Sbjct: 232 SIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEM 291
Query: 74 VRDGVSPNKFTWSLVAQILCRS---GKFEVVLGLL--DSGIYSSVMYNLVIDFYSKKGDF 128
R GV P+ T++L+ LC++ K E+VL + + +V YN +I Y+ G
Sbjct: 292 TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRL 351
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK------ 182
A +M R L P +S L ++ +++ + I M K P
Sbjct: 352 KEAAKMFRKM-KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 183 ------------------HFLSGN---------DYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ + N + +I + G A +IF +
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T ++ A S+ GR+ +A++ ++ + RGI + Y++ + C +
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530
Query: 276 GLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L+ +++ +G P + + + S C G+ + ++ V D G D +SL++
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDG 590
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
YC ++DKA + +E + D+ TY LLDG FK+GR+ + + +F M+ V +
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I+++ L A K EM++ G + Y ++ G
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 164/405 (40%), Gaps = 46/405 (11%)
Query: 44 VP-AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
VP V + L+D R L L+G ++R G+ ++ T S + + LC + + E +
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212
Query: 103 GLL-----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSIL 155
+L + G +V Y++++ A D M G +P Y++++
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + +T + + M + + P + + +I L AE++ ++
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPD--VVTYNLIIDALCKARAMDKAELVLRQMTTNG 330
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T CM+ + GR+KEA +++
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMF-------------------------------- 358
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
R + RG IP + + F+AS C G+ KE E+ ++ KG D +L+ Y
Sbjct: 359 ---RKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGY 415
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
S I L ++ + D +++L+ K G +++A+ IF M++ V
Sbjct: 416 ASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV 475
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ V+S + L AM+ ++M+ G +P+ A Y +I GF
Sbjct: 476 VTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGF 520
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 159/420 (37%), Gaps = 33/420 (7%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y+ +G F D + ++ M+ G N L+ A ++ + A ++ M + G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
VSP+ T+S VI +S+ G A ++ N+
Sbjct: 471 VSPDVVTYS------------------------------TVISAFSRMGRLTDAMEKFNQ 500
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M R + P + Y SI+ G + + +V M+ K +P+ + + VI L
Sbjct: 501 MV-ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG-IPRPDIVFFNSVINSLCK 558
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A IF D T ++ G++ +A +I + G+
Sbjct: 559 DGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT 618
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ K + + L R++ +G P + +A G+ + ++
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI 678
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ G + ++ C N D+AI L K+ + + + +++ ++K R E
Sbjct: 679 ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA +F + ++ + S++ +++ L + A M K G P ++I
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/408 (19%), Positives = 158/408 (38%), Gaps = 40/408 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++ Y+ +G+ D + ++ M+ G P V + ++ A R + A + MV
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDF 128
G+ PN + + Q C G E+V +++ GI V +N VI+ K G
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM----VE------KK 178
A D + ++ P T++S++DG K + + +I+ M VE
Sbjct: 563 MDAHD-IFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYST 621
Query: 179 LLPKHFLSG--ND---------------------YVIQKLSDMGKTYAAEMIFKRACDEK 215
LL +F +G ND ++ L G+T AA F +
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ G +L L + EAI ++ + + + +N + K + EE
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L + G +P + + G ++ + S++ G++ S + ++
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I KA K++ + L+ +T ++L + G+ E +++
Sbjct: 802 LEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 179/430 (41%), Gaps = 23/430 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYG-FVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S+V+D D LE+++ M G VP V N+LL L + A L+ M
Sbjct: 112 SVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMA 171
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
+ G PN ++S + LC++G+ + L + + S + +LV A
Sbjct: 172 KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLV-----------AYTSF 220
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+ +C + ++ + + S ++G++ +K H + +I+
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFS-TVIGILCKKG----HAEEAQNQMIEH 275
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS---ERGI 251
L G A F+ + ++ A+ K R+ + + ++ + E
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y V+ LCK Q +E L+ ++ G P + S V C GK +
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGL 370
LL + +G+ DSF +S++ ++D A++ H++ K +GS D+ TY+ LLDGL
Sbjct: 396 LLEEMSKEGVFPDSFTDASILNALSKAGKVDYALS-HLETMKARGSTPDLVTYNTLLDGL 454
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K GR++EA+ M K S+ I+++ LC + A EM+K G PD
Sbjct: 455 CKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDT 514
Query: 430 ATYKQVISGF 439
Y ++ G
Sbjct: 515 VLYHSLLDGL 524
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 174/410 (42%), Gaps = 64/410 (15%)
Query: 39 RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF 98
R G+ +V N LDAL + N +LA + M R G P+ FT+S+V + LC++G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 99 ----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
E++ L +SG+ +V+ Y++VID K A + M G P T++S
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+L G SG +++S+ + E + K C+
Sbjct: 150 LLKG--------------------------LCSG-----ERMSEAFVLF--EYMAKAGCE 176
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ + +L L K GR+ EA +++ + E+ Y +FV LCK ++ E
Sbjct: 177 PNV----ISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAE 232
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
C R +V +G A+ S + C KG +E + + ++E
Sbjct: 233 ACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------------------NQMIE 274
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--- 390
+ C + +D+A ++ ++ L+ + K R+ + V +F MK +K
Sbjct: 275 HLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFY 334
Query: 391 -VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I+V LC K+L +A + +EM G PD TY ++ G
Sbjct: 335 CPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 172/440 (39%), Gaps = 52/440 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +LD G + ++ M VP + A + + L + N + A MV
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL----------GLLDSGIY------------SSV 113
G + +S V ILC+ G E G+LD S+
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302
Query: 114 MYNLVIDFYSKK---GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++N +I K D F R+ M P TY+ ++D + ++ + + +
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSM-KEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-------TC 223
V M L P + ++ L +GK RACD E+ + T
Sbjct: 362 VNEMANYGLSPD--VVTYSALVDGLCKLGK-------LDRACDLLEEMSKEGVFPDSFTD 412
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+L ALSK G+V A+ + RG T Y ++ LCK + +E L +V
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
P + + + C G+ + ++ +G+L D+ SL++ N D
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532
Query: 344 AIALHIKIEKLKGSL---DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
A+ L LK SL D + +++DGL K G+ E+A + + M + + + +++
Sbjct: 533 ALEL------LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYIN 586
Query: 400 VVSRLCHLKELRKAMKNHDE 419
VV L L ++ KA + D+
Sbjct: 587 VVRGLRKLGKVDKARQLVDD 606
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 36/256 (14%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ M YG P V +AL+D L + ++ A L M ++GV P+ FT + + L
Sbjct: 360 ELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419
Query: 93 CRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
++GK + L L++ V YN ++D K G A L +M + TP
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK-CTPD 478
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-------------------------K 182
+Y+ I+ R + + I MV++ +LP K
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 183 HFLSGNDYVIQK-----LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
L D+V+ K L GK A + +R D T +++ L K G+V
Sbjct: 539 TSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVD 598
Query: 238 EAIQIYHLISERGITV 253
+A Q+ SE +V
Sbjct: 599 KARQLVDDASETHTSV 614
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS +DA +L+ S G L M+ G P + N LLD L + I A
Sbjct: 408 DSFTDAS--ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYS 123
MV +P+ F+++++ LCRSG+ + ++ G+ +V+Y+ ++D +
Sbjct: 466 FLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525
Query: 124 KKGDFGAAFDRL-NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ G A + L +C P F + ++DG + K E + +V M +
Sbjct: 526 RNGLEDLALELLKTSLCK-----PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPAD 580
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
F N V++ L +GK A + A + ++
Sbjct: 581 AFTYIN--VVRGLRKLGKVDKARQLVDDASETHTSVE 615
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 190/411 (46%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L +Y M+ + ++ + LL AL A L+ M R + T++++ +
Sbjct: 108 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 163
Query: 92 LCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LC +GK L LL ++V YN VI + +G AA D + EM + P T
Sbjct: 164 LCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 223
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
Y +++ G + + + + ++ M+ K ++ P+ + + +I D GK A +
Sbjct: 224 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRD 281
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R + + + T ++ AL +GR EA ++ + +G+ + Y +N CKE
Sbjct: 282 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEG 341
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
++ + ++ RG + + + + KG+ +E ++L + +G+ D +
Sbjct: 342 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 401
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ + ++ ID+A + ++EK + + D TY+ L+ GL GR++EA ++ D M +
Sbjct: 402 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 461
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++S +++ A++ +EM+ G P TY +I G
Sbjct: 462 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 512
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 150/380 (39%), Gaps = 61/380 (16%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++PN++T+ V C+ G+ + + + D + +VMYN +I Y +G
Sbjct: 214 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 273
Query: 129 GAAF---DRLNEMCNGRNLTPGFSTYSSI-----LDGARRYEKTEVSDRIVGLMVEKKLL 180
A DR+ E R + +TY+ + +DG R E E+ + + G + +
Sbjct: 274 DTALLYRDRMVE----RGVAMTVATYNLLVHALFMDG-RGTEAYELVEEMGGKGLALDVF 328
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ L I G A IF+ + T ++ ALSK+G+V+E
Sbjct: 329 TYNIL------INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ RGI Y A +N S
Sbjct: 383 KLFDEAVRRGIRPDLVLYNALIN-----------------------------------SH 407
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G E++ + K + D ++LM C ++D+A L ++ K D+
Sbjct: 408 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 467
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
TY+ L+ G G +++A+RI + M + ++ ++ LC + A E
Sbjct: 468 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 527
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G PD++TY +I G
Sbjct: 528 MVENGITPDDSTYISLIEGL 547
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 143/333 (42%), Gaps = 11/333 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V+ + G + ++V+ M G V P NAL+ Q ++ A MV
Sbjct: 227 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 286
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
GV+ T++L+ L G+ +E+V + G+ V YN++I+ + K+G+ A
Sbjct: 287 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKA 346
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M R + TY+S++ + + + +D++ V + + P L + +
Sbjct: 347 LEIFENMSR-RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY--NAL 403
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I S G A I ++I D T +++ L GRV EA ++ +++RGI
Sbjct: 404 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 463
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ + ++ + +++ +G+ P + + + C G+ + E
Sbjct: 464 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 523
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCS--NRQID 342
++ +++ G+ D SL+E + R ID
Sbjct: 524 MVKEMVENGITPDDSTYISLIEGLTTEDERAID 556
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 201/441 (45%), Gaps = 24/441 (5%)
Query: 17 LVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
VL+ YS+ GL + LEVYR M G P++ +AL+ AL ++ + +
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFY 122
L M G+ PN +T+++ ++L R+GK +E+ + D G V Y ++ID
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307
Query: 123 SKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G A + +M NG P Y ++LD + + M +P
Sbjct: 308 CNAGQLENAKELFVKMKANGHK--PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365
Query: 182 K--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
F D V+ K D + +A + ++ + I T ++ L + GR+++A
Sbjct: 366 DVVTFTILVD-VLCKARDFDEAFATFDVMRK---QGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++ + G+ Y F++ K + + + +G +P + + + S
Sbjct: 422 LKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G+ +E + + + + + GL DS + +M+ Y Q+D+A+ L ++ + D
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
V + L+D L+K GR++EA ++FD MK++K+ + ++ ++S L ++KA++ +
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M++ P+ ++ ++ F
Sbjct: 602 SMIEKKCSPNTISFNTLLDCF 622
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 44/417 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ E++R M G P + L+DAL ++ A L+ M +G P++ + +
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL 339
Query: 90 QILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
G + D + V + +++D K DF AF + M + +
Sbjct: 340 DKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM-RKQGI 398
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY++++ G R + E + +++G M + P + + I G+T A
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY--NIFIDYFGKSGETGKA 456
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
F++ + I C L +L++ GR++EA +++ + E G+ Y +
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
K Q +E LL +++ G P D
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEP-----------------------------------D 541
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+SL++ ++D+A + +++ +K S V TY+ LL GL K+GR+++A+ +F+
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
M E K ++ SF ++ C E+ A+K +M M KPD TY VI G +
Sbjct: 602 SMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 197/462 (42%), Gaps = 58/462 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++ +D + G +E + M+ G VP + ACNA L +L +R A
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDF 121
++ + +G++P+ T++++ + + G+ + + LL I + ++ N +ID
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 122 YSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
K G A FDR+ +M L+P TY+++L G + + + + + M+EKK
Sbjct: 552 LYKAGRVDEAWQMFDRMKDM----KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC-DEKIELQDDTCGCMLKALSKEGRVK 237
P T + + C ++++EL M K +
Sbjct: 608 CSP------------------NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV--CGLLRDVVERGYIPCAMELSR 295
IY LI E + + + F + L K P+ V C LL +V+ G I A+ ++R
Sbjct: 650 YNTVIYGLIKENKV----NHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIAR 705
Query: 296 FVASQ----CGKGKWKEV--EELLSAVLDKGLLL------------DSFCCSSLMEYYCS 337
Q + W+++ L+ A +DK ++ DSF L+ C
Sbjct: 706 DFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLI-PLVRVLCK 764
Query: 338 NRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+++ A + K K G S +A+Y+ L+ L + E+A +F MK + +
Sbjct: 765 HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+F ++++ ++ + + + EM+ KPD TY VIS
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 194/477 (40%), Gaps = 53/477 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G S ++++ CYS G + + + M G P V N+L+D+LY+ +
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVID 120
A ++ M +SP T++ + L + G+ + + L +S I +++ +N ++D
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K + A ++M + P TY++++ G + K + ++K +
Sbjct: 621 CFCKNDEVELALKMFSKM-TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSMH 678
Query: 181 PKH-----FLSG--------------NDY--------------------VIQKLSDMGKT 201
P H L G D+ +++ D
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAII 738
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GITVRDSDYYA 260
+A E++ C E D +++ L K R A QI+ +++ GI+ + Y
Sbjct: 739 FAEELVLNGICRE-----DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ L + H E+ L +D+ G P A + +A GK E+ EL ++ +
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D+ + ++ + +DKA+ + TY L+DGL K GR+EEA+
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913
Query: 381 RIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
R+F+ M + + + F I+++ + + A + M+ G +PD +Y ++
Sbjct: 914 RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILV 970
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 136/315 (43%), Gaps = 14/315 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P +++ N L+ L + A L+ M G +P+ FT++++ + +SGK +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 102 LGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L I ++ YN+VI +K + A D ++ + + P TY ++D
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRTYGPLID 901
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + E + R+ M + P + + +I +G T A +FKR +E I
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIF--NILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF---VNVLCKEHQPEE 273
+ ++ L GRV EA+ ++ + G+ D D+ A+ +N L K + EE
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL---DPDFIAYNRIINGLGKSQRMEE 1016
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ RG +P + + + G ++ + + + GL D F ++L+
Sbjct: 1017 ALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Query: 334 YYCSNRQIDKAIALH 348
Y + + A ++
Sbjct: 1077 GYSLSENPEHAYTVY 1091
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 1/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L + G EA+++Y + G+ Y A + L K+ E V LL+++ + G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + GK E E+ + D+G D + L++ C+ Q++ A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRL 404
L +K++ D Y LLD G ++ + M+ + + +F I+V L
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C ++ +A D M K G P+ TY +I G +
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLL 413
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 124/266 (46%), Gaps = 21/266 (7%)
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
LL H SG K++++ + Y EMI +R + I T ++ +L+K + +
Sbjct: 829 LLAVHGKSG------KITELFELYK-EMISRRCKPDAI-----TYNIVISSLAKSNNLDK 876
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-CAMELSRFV 297
A+ ++ + Y ++ L K + EE L ++ + G P CA+ F
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI----FN 932
Query: 298 ASQCGKGKWKEVE---ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
G GK + E +L ++++G+ D + L++ C ++D+A+ +++
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
D Y+ +++GL K RMEEA+ +++ M+ +V ++ ++ L + +A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++E+ G +PD TY +I G+
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGY 1078
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L+K GR++EA++++ +S+ G + + +N K E C L + +
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V G P + V C G+ E + + GL D + ++ ++++
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
++A+AL+ ++ D+ TY+ L+ L G +E+A R+++ EL++ V
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE---ELQLAGLEPDVFTY 1071
Query: 402 SRLCHLKELRK----AMKNHDEMLKMGHKPDEATYKQV 435
+ L L + A + M+ G P+ TY Q+
Sbjct: 1072 NALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 3/221 (1%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD-YYAFVNVLCKEHQPEEVCGLLR 279
+TC ML+ L +V++ ++ + ++ I RD D Y L ++ +L
Sbjct: 123 ETCNFMLEFLRVHDKVEDMAAVFEFMQKK-IIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + G++ A + + G E E+ ++ +GL S+LM R
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
+ + L ++E L +V T+ + + L + G+++EA IF M + ++
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC+ +L A + +M GHKPD+ Y ++ F
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G + + ++ M YG P + N L++ + + A L+ MV +G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
+ P+ +++++ LC +G+ + L L +G+ + YN +I+ K A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 133 DRLNEMCNGRNLTPGFSTYSSIL 155
NEM N R + P TY+S++
Sbjct: 1019 ALYNEMRN-RGIVPDLYTYNSLM 1040
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 190/411 (46%), Gaps = 12/411 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
+++ G + CN L++ + ++ LAS G M++ G P+ T++ + C +
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 98 FEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E + +++ GI VMY +ID K G A ++M N + P Y+
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYT 216
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S+++G + +D ++ M ++K+ P + + +I GK AE ++
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPD--VITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
I T ++ EG V EA Q+++L+ +G Y + +N CK + +
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + ++ ++G + + + GK +E+ S ++ +G+ + + L+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 333 EYYCSNRQIDKAIALHIKIEK--LKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
C N ++ KA+ + ++K + G + ++ TY+VLL GL +G++E+A+ +F+ M++
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 390 KVVSSSSFVIVVSR-LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ + +C +++ A+ + G KP+ TY +ISG
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 153/367 (41%), Gaps = 11/367 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + + M G P V ++D+L + + A L+ M G+ P+ ++ +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC SG++ ++ G+ I V+ +N +ID + K+G F A + NEM ++
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR-MSI 278
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY+S+++G + + ++ LM K P + +I K A
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD--VVAYTSLINGFCKCKKVDDA 336
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
IF + + T +++ + G+ A +++ + RG+ Y ++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 265 LCKEHQPEEVCGLLRDVVER---GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
LC + ++ + D+ +R G P + + C GK ++ + + + +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ + +++ C ++ A+ L + +V TY ++ GLF++G EA
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 382 IFDYMKE 388
+F MKE
Sbjct: 517 LFRKMKE 523
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 136/318 (42%), Gaps = 14/318 (4%)
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-KHFLS 186
F A D M R L P ++ +L+ + +K +V ++ L +++ H L
Sbjct: 53 FNEALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDV---VINLCDHLQIMGVSHDLY 108
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ + Y A + E T ++ R++EA+ + + +
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
E GI Y ++ LCK L + G P + + V C G+W
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
++ + LL + + + D ++L++ + + A L+ ++ ++ + ++ TY L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 367 LDGLFKDGRMEEAVRIFDYMKELK-----VVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
++G +G ++EA ++F Y+ E K VV+ +S +++ C K++ AMK EM
Sbjct: 289 INGFCMEGCVDEARQMF-YLMETKGCFPDVVAYTS---LINGFCKCKKVDDAMKIFYEMS 344
Query: 422 KMGHKPDEATYKQVISGF 439
+ G + TY +I GF
Sbjct: 345 QKGLTGNTITYTTLIQGF 362
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
Q E L +VE +P ++ ++ + K+ V L + G+ D + C+
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
LM +C + Q A + K+ KL D+ T+ L++G RMEEA+ + + M E+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 390 KVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ LC + A+ D+M G +PD Y +++G
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 235 RVKEAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV----VERGYIPC 289
+ EA+ ++ H++ R + D+ +NV+ K + + V L + V C
Sbjct: 52 QFNEALDLFTHMVESRPLP-SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ ++ F C + L ++ G D +SL+ +C ++++A+++
Sbjct: 111 NLLMNCF----CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLK 408
++ ++ DV Y ++D L K+G + A+ +FD M+ + + +V+ LC+
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
R A M K KPD T+ +I F+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 200/448 (44%), Gaps = 15/448 (3%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I S G ++ + L++V++C L G V M G P V AL++ L Q
Sbjct: 102 IFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQG 161
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYN 116
+ A L M + + +T+ ++ LC++G + L + + V+Y+
Sbjct: 162 NVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYS 221
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
++D K G A + +EM +G+ + P TY+ ++ G + + + + ++ M++
Sbjct: 222 TIMDGLCKDGLVSEALNLCSEM-SGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK 280
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI--FKRACDEKIELQDDTCGCMLKALSKEG 234
+ + L + ++ GK A+ + F E ++ T ++ +
Sbjct: 281 MGM--RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVF--TYNSLIHIYCLQN 336
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
++ EA++++HL+ RG + + ++ CK+ +V LL ++ + G++P + +
Sbjct: 337 KMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWT 396
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C G+ +EL + G + + C+ +++ C + +A++L +EK
Sbjct: 397 TLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKS 456
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRK 412
L++ Y +LLDG+ G++ A +F + K L+ ++ ++ I++ LC L K
Sbjct: 457 NLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQ-INVYTYTIMIKGLCKQGSLDK 515
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGFM 440
A M + G PD TY + G +
Sbjct: 516 AEDLLINMEENGCLPDNCTYNVFVQGLL 543
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 163/399 (40%), Gaps = 47/399 (11%)
Query: 19 LDCYSHKGLFMDGL----------EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
LD Y++ G+ ++GL E R M + P V + ++D L + + A
Sbjct: 180 LDVYTY-GVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALN 238
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYS 123
L M GV PN T++ + Q LC G+++ LLD I + N+++D +
Sbjct: 239 LCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFC 298
Query: 124 KKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K+G A + M G P TY+S++ K + R+ LMV + LP
Sbjct: 299 KEGKVMQAKSVIGFMILTGEG--PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPD 356
Query: 183 HFLSGN-----------DYVIQKLSDMGKT-YAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ + + V+ L +M K + +++ T ++
Sbjct: 357 IVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVV--------------TWTTLIGGF 402
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+ GR A +++ + + G ++ LCK + E L + +E+ +
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSL-AEAMEKSNLDLN 461
Query: 291 MEL-SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + S + C GK EL S++ KGL ++ + + +++ C +DKA L I
Sbjct: 462 IVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLI 521
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+E+ D TY+V + GL + +++ M++
Sbjct: 522 NMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRD 560
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 16/282 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L++++D + +G M V M + G P V N+L+ QN++ A ++ M
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
V G P+ ++ + C+ V+ LL+ + V + +I + + G
Sbjct: 349 VSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRP 408
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AA + M + P T + ILDG K + V L + + K L N
Sbjct: 409 LAAKELFLNM-HKYGQVPNLQTCAVILDG---LCKGNLLSEAVSL---AEAMEKSNLDLN 461
Query: 189 DYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ L D GK AA +F + +++ T M+K L K+G + +A +
Sbjct: 462 IVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLI 521
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ E G + Y FV L + + L + ++G+
Sbjct: 522 NMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGF 563
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 197/446 (44%), Gaps = 21/446 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G ++ + L++V++C L G V M G P V L++ L Q + A
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDF 121
L M + + +T+ ++ LC++G +G L + + V+Y+ ++D
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G A + +EM NG+ + P TY+ ++ G + + + + ++ M++ + P
Sbjct: 227 LCKDGLVSEALNLCSEM-NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRP 285
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMI--FKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
L + ++ GK A+ + F E ++ T ++ + ++ EA
Sbjct: 286 D--LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVF--TYNSLIHIYCLQNKMNEA 341
Query: 240 IQIYHLISERGITVRDSDYYAFVNVL---CKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
++++HL+ RG R D F +++ CK+ + LL ++ + G++P +
Sbjct: 342 MRVFHLMVSRG---RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTL 398
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C G+ +EL + G + + C+ +++ C + +A++L +EK
Sbjct: 399 IGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNL 458
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAM 414
L++ Y +LLDG+ G++ A +F + K L+ ++ + I++ LC L KA
Sbjct: 459 DLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQ-INVYIYTIMIKGLCKQGSLDKAE 517
Query: 415 KNHDEMLKMGHKPDEATYKQVISGFM 440
M + G P+ TY + G +
Sbjct: 518 DLLINMEENGCLPNNCTYNVFVQGLL 543
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 160/393 (40%), Gaps = 35/393 (8%)
Query: 19 LDCYSHKGLFMDGL----------EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
LD Y++ G+ ++GL R M + P V + ++D L + + A
Sbjct: 180 LDVYTY-GVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALN 238
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYS 123
L M GV PN T++ + Q LC G+++ LLD + + M N+++D +
Sbjct: 239 LCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFC 298
Query: 124 KKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K+G A + M G P TY+S++ K + R+ LMV + LP
Sbjct: 299 KEGKVMQAKSVIGFMILTGEG--PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLP- 355
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACD-----EKIELQDD--TCGCMLKALSKEGR 235
D V+ + + + + +A K+ D T ++ + GR
Sbjct: 356 ------DIVV--FTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGR 407
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A +++ + + G ++ LCKE+ E L + + + + S
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSI 467
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C GK EL S++ KGL ++ + + +++ C +DKA L I +E+
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENG 527
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ TY+V + GL + +++ M++
Sbjct: 528 CLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRD 560
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 126/307 (41%), Gaps = 9/307 (2%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
MM++ G P + N L+DA ++ ++ A + G M+ G P+ FT++ + I C
Sbjct: 278 MMKM-GMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN 336
Query: 97 KFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K + + + V++ +I + K + A L EM + P +T+
Sbjct: 337 KMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEM-SKMGFVPDVATW 395
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++ G + + + + M + +P L ++ L A + K
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPN--LQTCAVILDGLCKENLLSEAVSLAKAM 453
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
++L +L + G++ A +++ + +G+ + Y + LCK+
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSL 513
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ LL ++ E G +P + FV K + + L+ + DKG +D+ +
Sbjct: 514 DKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFI 573
Query: 332 MEYYCSN 338
+ Y +N
Sbjct: 574 INYLSTN 580
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 189/436 (43%), Gaps = 24/436 (5%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L Y+ KGL + L V+ M YG +P++ +CN+LL L R+ E +A +Y M+
Sbjct: 160 MILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISF 219
Query: 77 GVSPNKFTWSLVAQILCRSGKF----------EVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
VSP+ FT S+V CRSG E LGL + V YN +I+ Y+ G
Sbjct: 220 EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLE----LNVVTYNSLINGYAMIG 275
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D R+ + + R ++ TY+S++ G + E ++ + L+ EKKL+ +
Sbjct: 276 DV-EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
G ++ G+ A + + + C ++ K G++ EA QI+ +
Sbjct: 335 G--VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
++ + Y V+ C+ +E L + ++ +P M + + G +
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+V L +L +G+ D CS+L+E ++A+ L + D T +V+
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLK 422
+ GL K ++ EA I D + + V L H + L++A + M +
Sbjct: 513 ISGLCKMEKVNEAKEILD---NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 423 MGHKPDEATYKQVISG 438
G P Y +ISG
Sbjct: 570 KGIFPTIEMYNTLISG 585
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 185/471 (39%), Gaps = 54/471 (11%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++D Y G D + V+ M G + CN+L++ + ++ A ++ M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAA 131
+ P+ T++ + CR+G + L L D + +VM YN+++ YS+ G F
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--- 188
L +M R + + S++L+ + + D + + + +L + L+
Sbjct: 456 LS-LWKMMLKRGVNADEISCSTLLEALFK-----LGDFNEAMKLWENVLARGLLTDTITL 509
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L M K A+ I + + T + K G +KEA + +
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI Y ++ K +V L+ ++ RG P + C G +
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI----------------- 351
+++KG+ L+ CS + +ID+A L KI
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 352 ----------EKLKGSLDVAT-----------YDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
+K+ S++ +T Y+V + GL K G++E+A ++F D +
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ I++ ++ KA DEM G P+ TY +I G
Sbjct: 750 RFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 180/430 (41%), Gaps = 59/430 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L YS G F D L +++MM G +C+ LL+AL++ + A L+ ++
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-GIY----SSVMYNLVIDFYSKKGDFGA 130
G+ + T +++ LC+ K +LD+ I+ + Y + Y K G+
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGND 189
AF + E + + P Y++++ GA +Y +V+D ++ L + L P G
Sbjct: 560 AF-AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA-RGLTPTVATYGA- 616
Query: 190 YVIQKLSDMG---KTYAA--EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+I ++G K YA EMI ++ I L + C + +L + ++ EA +
Sbjct: 617 -LITGWCNIGMIDKAYATCFEMI-----EKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Query: 245 LISERGI---------------------------TVRDSD-----------YYAFVNVLC 266
I + + +V +S Y + LC
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLC 730
Query: 267 KEHQPEEVCGLLRDVVERG-YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
K + E+ L D++ +IP + + G + L + KG++ +
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L++ C +D+A L K+ + + + TY+ L+DGL K G + EA+R+ +
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Query: 386 MKELKVVSSS 395
M E +V S
Sbjct: 851 MIEKGLVRGS 860
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG--------------------------- 356
D F CS ++ YC + +DKA+ + E G
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 357 ---------SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCH 406
S +V TY L+ G K G MEEA +F+ +KE K+V+ + +++ C
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++R A++ HD M+++G + + +I+G+
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 196/476 (41%), Gaps = 87/476 (18%)
Query: 44 VPAVSACNALLDALY---RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
+P++S+CN LL++L R ++R A +G +V G P+ F W+ V Q +G +V
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAA---FGLLVAAGARPDTFAWNKVVQACVAAGDLDV 175
Query: 101 VLGLLD--------------------SGIYSS----------------------VMYNLV 118
L +L +G++ S + YN +
Sbjct: 176 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTM 235
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID + K GD A F RL + P TY+ +L G R + + + ++ M
Sbjct: 236 IDGHVKGGDLEAGF-RLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+LP F + L+ G++ +F + + + L TC +L L K+G+V +
Sbjct: 295 MLPDGFTYS--ILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352
Query: 239 AIQIYHLISERGIT---------------VRD--------------------SDYYAFVN 263
A Q++ ++ G+ VRD Y A +N
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK + L+ ++ + G P + + + G+ ++ +LS + KG+
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D S+++ +C N +I +A+A+ + + + Y+ ++D + G E+A+ +
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLV 532
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ MK V +S ++ +++ LC ++ +A + + G +PD +Y +IS
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 162/372 (43%), Gaps = 22/372 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + +P + L D L R E + L+ ++ GV +T S++ LC+ GK
Sbjct: 290 MASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGK 349
Query: 98 F----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+V L+ +G + ++V+YN +I+ Y + D AF +M R++ P TY+
Sbjct: 350 VAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYN 408
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIF 208
++++G + E ++ +V + +EK SG D ++ + + Y E F
Sbjct: 409 ALINGLCKLEMVTKAEDLV-MEMEK--------SGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 209 KRACD-EKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
D ++ ++ D + G ++KA K G++ EA+ I + + + Y + ++
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ E+ L+ + G + + + C + E EEL+ + ++GL D
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++++ C+ DKA+ L ++ K + T L+ L GR+ + ++
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639
Query: 386 MKELKVVSSSSF 397
M V SSS
Sbjct: 640 MLHKNVEPSSSI 651
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 23/188 (12%)
Query: 11 QSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+SD +S V+ + G + + + M P N+++DA + A
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYS 123
L M GVS + T++L+ + LCRS + E++ L + G+ V+ YN +I
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGF---STYSSILDGARR------------YEKTEVSD 168
KGD A + L EM N + P T S L A R ++ E S
Sbjct: 591 NKGDTDKALELLQEM-NKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 649
Query: 169 RIVGLMVE 176
I G+MV+
Sbjct: 650 SIYGIMVD 657
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 79/183 (43%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + L + + + + ++V+ G P + + + G + L +L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G + + L+ C ++D+ AL ++ D TY +L DGL + G +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 378 EAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +F + +K+ ++ + + I+++ LC ++ KA + + ++ G P Y +I
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 437 SGF 439
+G+
Sbjct: 377 NGY 379
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 203/463 (43%), Gaps = 41/463 (8%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L Y+ KG+ + L V+ M YG +P++ +CN+LL L ++ E +A +Y M+
Sbjct: 160 MILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQMISF 219
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGL---LDSGI---YSSVMYNLVIDFYSKKGDFGA 130
VSP+ FT S+V CR GK + + +D+ + + V N +I+ Y+ GD
Sbjct: 220 EVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDV-E 278
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--- 187
R+ + + R ++ T++S++ + E ++++ L+ EKKL+P + G
Sbjct: 279 GMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLI 338
Query: 188 ---------------NDYVIQ---------------KLSDMGKTYAAEMIFKRACDEKIE 217
+DY+I+ G+ AE I R D ++
Sbjct: 339 DGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLK 398
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ + G V EA+++ + ++ + Y + + +V L
Sbjct: 399 PDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL 458
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +++RG + S + + G + E +L VL +GLL D+ + ++ C
Sbjct: 459 WKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
++++A + + + DV TY L G + G ++EA + D+M++ + +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEM 578
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++S K L K E+ G P ATY +I+G+
Sbjct: 579 YNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGW 621
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 144/326 (44%), Gaps = 9/326 (2%)
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEVSD 168
+S ++++++ Y++KG A + M GR P + +S+L + + V+
Sbjct: 153 FSPTVFDMILKVYAEKGMVKNALHVFDNMGKYGR--IPSLLSCNSLLSNLVKKGENFVAL 210
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI--ELQDDTCGCM 226
+ M+ ++ P F V+ GK A M F + D + EL TC +
Sbjct: 211 HVYDQMISFEVSPDVFTCS--IVVNAYCRCGKVDKA-MAFAKEMDNSLGLELNVVTCNSL 267
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ + G V+ ++ L+SERG++ + + + CK+ EE + V E+
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKL 327
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + C G+ + + +++ G+ ++ C+SL+ YC + Q+ +A
Sbjct: 328 VPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
+ ++ D TY+ L+DG + G ++EA+++ M + +VV + ++ I++
Sbjct: 388 ILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYS 447
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEAT 431
+ + MLK G +E +
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVTANEIS 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/471 (19%), Positives = 181/471 (38%), Gaps = 54/471 (11%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++D Y G D + V+ M G + CN+L++ + ++ A + M
Sbjct: 336 VLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDW 395
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAA 131
+ P+ T++ + CR+G + L L + +VM YN+++ YS+ G F
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--- 188
L +M R +T + S++L+ + + D + + + +L + L+
Sbjct: 456 LS-LWKMMLKRGVTANEISCSTLLEALFK-----LGDFDEAMKLWENVLARGLLTDTITL 509
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L M K A+ I + + T + G +KEA + + +
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEK 569
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GI Y ++ K +V L+ ++ RG P + C G +
Sbjct: 570 KGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI----------------- 351
+++KG+ L+ CS + + D+A L KI
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 352 ----------EKLKGSLDVAT-----------YDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
+K+ S++ +T Y+V + GL K G++ +A ++F D +
Sbjct: 690 EPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSD 749
Query: 390 KVVSSSSFVIVVSRLCHLK-ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ C + ++ KA DEM G P+ TY +I G
Sbjct: 750 RFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGL 800
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 178/436 (40%), Gaps = 50/436 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L YS G F D L +++MM G +C+ LL+AL++ + A L+ ++
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLA 499
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-GIY----SSVMYNLVIDFYSKKGDFGA 130
G+ + T +++ LC+ K +LD+ I+ Y + Y G+
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKE 559
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF + + + + P Y++++ GA +Y KH D
Sbjct: 560 AF-AVKDFMEKKGIFPTIEMYNTLISGAFKY--------------------KHLNKVADL 598
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI+ L G T T G ++ G + +A + E+G
Sbjct: 599 VIE-LRARGLTPTVA----------------TYGALITGWCNIGMIDKAYATCFEMIEKG 641
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI-PCAMELSRFV---ASQCGKGKW 306
IT+ + N L + + +E C LL+ +V+ + P L F+ A+ C K +
Sbjct: 642 ITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQ- 700
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI-EKLKGSLDVATYDV 365
K E + ++ K L+ ++ + + C ++ A L + + D TY +
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTI 760
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ G DG + +A + D M ++ + ++ ++ LC L + +A + ++ + G
Sbjct: 761 LIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKG 820
Query: 425 HKPDEATYKQVISGFM 440
P+ TY +I G +
Sbjct: 821 TTPNAITYNTLIDGLI 836
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 125/319 (39%), Gaps = 22/319 (6%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y + G + V M G P + N L+ ++ + + L + G++P
Sbjct: 551 YYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPT 610
Query: 82 KFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
T+ + C G + +++ GI L ++ SK + D+ +E
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGI------TLNVNICSKIANSLFRLDKFDE 664
Query: 138 MC-------NGRNLTPGFSTYSSILD-GARRYEKTE-VSDRIVGLMVEKKLLPKHFLSGN 188
C + L PG+ + L+ A KT+ +++ + +K L+P + +
Sbjct: 665 ACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVY-- 722
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYHLIS 247
+ I L GK A+ +F + D+ T ++ + +G + +A + ++
Sbjct: 723 NVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMA 782
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+GI Y A + LCK + LLR + ++G P A+ + + G
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVA 842
Query: 308 EVEELLSAVLDKGLLLDSF 326
E L +++KGL+ S+
Sbjct: 843 EAMRLKEKMIEKGLVRGSY 861
>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 184/411 (44%), Gaps = 56/411 (13%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I+S + S D ++ + G EV R GF +V A N + L
Sbjct: 137 LIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNV 196
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK-FE---VVLGLLDSGIYSSVM-Y 115
NEI +Y M G N T++LV C+ K FE V +L G++ +V+ +
Sbjct: 197 NEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSF 256
Query: 116 NLVIDFYSKKGDFGAAFDRLNE--MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
N++ID K GD A L + M +G ++P TY+S+++G + + ++++RI G
Sbjct: 257 NMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGD 316
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV+ SG D C+E+ T G ++ A +
Sbjct: 317 MVK---------SGVD----------------------CNER------TYGALVDAYGRA 339
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G EA+++ ++ +G+ V Y + V L E E +LRD+ + M++
Sbjct: 340 GSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN-----MQI 394
Query: 294 SRF-----VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
RF V C G KE E + +K L+ D C ++LM ++ ++++ A +
Sbjct: 395 DRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQIL 454
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+ SLD ++ L+DG K+G++E A+ I+D M +K+ +S+ VI
Sbjct: 455 GSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM--IKMNKTSNLVI 503
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 150/352 (42%), Gaps = 20/352 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N++++ + + LA + G MV+ GV N+ T+ + R+G + L L
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 105 LDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
D + ++V+YN ++ + +GD A L +M N +N+ T + ++ G
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM-NSKNMQIDRFTQAIVVRGLC 407
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R + + + EKKL+ + ++ ++ K A+ I + + L
Sbjct: 408 RNGYVKEAVEFQRQISEKKLVED--IVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ G ++ KEG+++ A++IY + + T Y + VN L K + G
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG----MAGAAE 521
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL----DKGLLLDSFCCSSLMEYY 335
VV I + + + G +E +++LS + +K + L +F + ++ +
Sbjct: 522 AVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF--NIMINHL 579
Query: 336 CSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYM 386
C +KA + +K +G + D TY L+ K E+ V + DY+
Sbjct: 580 CKFGSYEKAKEV-LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYL 630
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 26/333 (7%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M++S G D ++D Y G + L + M G V N+++ L+ +
Sbjct: 317 MVKS--GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-Y 115
+I A + M + ++FT ++V + LCR+G E + + + ++ +
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS----TYSSILDGARRYEKTEVSDRIV 171
N ++ + + A L M L G S ++ +++DG + K E + I
Sbjct: 435 NTLMHHFVRDKKLACADQILGSM-----LVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKAL 230
M+ K+ L + ++ LS G AAE + +E++D T +L
Sbjct: 490 DGMI--KMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVN-----AMEIKDIVTYNTLLNES 542
Query: 231 SKEGRVKEAIQIYHLISERG--ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
K G V+EA I + ++ +V + +N LCK E+ +L+ +VERG +P
Sbjct: 543 LKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVP 602
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ + S ++V EL ++ +G+
Sbjct: 603 DSITYGTLITSFSKHRSQEKVVELHDYLILQGV 635
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 160/367 (43%), Gaps = 8/367 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++++C+S V + GF P ++L++ L +++ A + MV
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFG 129
G PN T++ + + C+ GK V +GLL G V+YN +ID K
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A D +E+ G+ + P TYS ++ G ++ E + + M+ ++P + +
Sbjct: 242 EALDIFSEI-KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD--VVTFN 298
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ KL G A+ I K ++ +E T ++ + +V EA ++ + +
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y +N CK + +E L ++ RG IP + ++ C G+ E
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA 418
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL + +G D C+ L++ C +D A+ L ++ ++ TYD+L+
Sbjct: 419 RELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Query: 370 LFKDGRM 376
++K G++
Sbjct: 479 MYKSGKI 485
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ S+ RV A + I + G + + +N LC E + ++V G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P + + C GK LL + G D +++++ C +R + +A+
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
+ +I+ DV TY +L+ GL + EEA +F+ M L ++ +F I+V +L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L +A M++ G +P+ ATY +++G+
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGY 339
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 135/329 (41%), Gaps = 45/329 (13%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
+N++I+ +S+ AF L ++ P T+SS+++G +K + M
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIK-LGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM 180
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSK 232
V P L + +I+ +GKT A + K+ +K + D ++ L K
Sbjct: 181 VASGYQPN--LHTYNTIIKGFCKIGKTTVAVGLLKKM--DKAGGRPDIVIYNTIIDGLCK 236
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+ V EA+ I+ I +G+ Y ++ LC Q EE L +++ +P +
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKI 351
+ V C +G E + ++ +++KG+ + +SLM YC N+ + + I
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 352 EKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
K G + +V +Y++L++G K R++EA +F
Sbjct: 357 TK--GCMPNVVSYNILINGYCKAQRIDEARELF--------------------------- 387
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
DEM G P+ Y +ISG
Sbjct: 388 -------DEMSFRGLIPNTFNYNTLISGL 409
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 1/175 (0%)
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C E+ ++ + +PC +E + +++ + V L + + D
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
F + L+ + +++D A ++ KI KL D T+ L++GL + + A+ FD
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + ++ ++ C + + A+ +M K G +PD Y +I G
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 188/431 (43%), Gaps = 9/431 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++CY H + + G+ P N L+ L +++ A + +
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIY--SSVMYNLVIDFYSKKGDF 128
+ G ++F++ + LC+ G+ L +L D + + VMYN +ID K
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A++ ++M + ++P T+S+++ G + E + + MV K + P ++
Sbjct: 225 IDAYELYSQMI-AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTF-- 281
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L G A+ + E + T ++ +V +A + + IS+
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ 341
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y +N CK +E L D+ +G P + + + C G+
Sbjct: 342 MGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EL+ + D G + F + L++ C N +D+AIAL KI+ D+ T+++L+
Sbjct: 402 AWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIY 461
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR++ A +F D + + V++ ++ I+V+ LC +A +M G P
Sbjct: 462 GLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIP 521
Query: 428 DEATYKQVISG 438
D TY+ +I
Sbjct: 522 DAVTYETLIQA 532
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 151/350 (43%), Gaps = 14/350 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N ++D+L + + A LY M+ +SP+ T+S + C G+ E GL +
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVL 271
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
++ +N+++D K+G+ A + L M + P TYSS++DG +
Sbjct: 272 KNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMK-EGVMPNVVTYSSLMDGYCLVNQVN 330
Query: 166 VSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ ++ + + P + N + K+ D + +M FK +K+ T
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV-----T 385
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ L K GR+ A ++ + + G Y ++ LCK H ++ L++ +
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
++G P + + C G+ K +++ +L KG ++++ + ++ C D
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+A AL K++ D TY+ L+ LF E+A ++ M VV
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 6/244 (2%)
Query: 202 YAAEMIFKRACDEKI-----ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ AEM F + KI E T ++K L G+VKEA+ + + G +
Sbjct: 115 HMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQF 174
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +N LCK + +LR + + + + + S C + EL S +
Sbjct: 175 SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQM 234
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ K + D S+L+ +C Q+++A L ++ + D T+++L+D L K+G +
Sbjct: 235 IAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNL 294
Query: 377 EEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ A + M KE + + ++ ++ C + ++ KA + + +MG P+ +Y +
Sbjct: 295 KGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTM 354
Query: 436 ISGF 439
I+GF
Sbjct: 355 INGF 358
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 83/209 (39%), Gaps = 1/209 (0%)
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S AI + + GIT + +N C + ++ +++ GY P
Sbjct: 79 SNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDT 138
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + + C GK KE VL G LD F +L+ C + A+ + K
Sbjct: 139 ITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRK 198
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
I+ ++V Y+ ++D L K + +A ++ M K+ +F ++ C + +
Sbjct: 199 IDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQ 258
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
L +A EM+ PD T+ ++
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDA 287
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI-FDYMKE 388
S ++ SN +D ++ + + K + + ++ +L L K I E
Sbjct: 36 SQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLE 95
Query: 389 LKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ +F I+++ CH+ E+ A ++LKMG++PD T+ +I G
Sbjct: 96 FHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKG 147
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 201/472 (42%), Gaps = 68/472 (14%)
Query: 10 SQSDALSLVLDCYSHKGLF-----MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
SQ L+ V+ C G + ++ E++ M G P ++ N L+ L ++ ++
Sbjct: 174 SQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQ 233
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSK 124
L ++++GV PN FT+++ Q LCR G E G S V+
Sbjct: 234 EGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLE--------GANSKVV---------- 275
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + L++M N + L P TY++I+ G + K + + RI+ K +P F
Sbjct: 276 -----EAENYLHKMVN-KGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I + G A +F+ A + ++ ++K LS++G V +A+Q+ +
Sbjct: 330 TYCS--LIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK- 303
+S+ G++ Y +N LCK + LL + +GY+P + + C +
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL 447
Query: 304 ----------------------------------GKWKEVEELLSAVLDKGLLLDSFCCS 329
K ++V E +++KG L + +
Sbjct: 448 KMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYN 507
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L+E C R++ +A+ L +I D ++ ++ G +G ++EA ++F M++
Sbjct: 508 ILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567
Query: 390 KVV--SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + +++ I+++ ++ A K EM G PD TY+ +I GF
Sbjct: 568 YRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGF 619
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 205/466 (43%), Gaps = 51/466 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + ++V+ M Y P++ + NA+++ L A +Y M +G++P+
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T+++ + CR+ + L LL++ ++V+Y VI + ++ A++ N
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + P +T++ ++ + + ++++ +++ + P F + IQ L
Sbjct: 206 KMLR-LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTF--NIFIQGLC 262
Query: 197 DMG-------KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
G K AE + ++ +E D T ++ SK G++++A +I +
Sbjct: 263 RKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFK 322
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC-------------------A 290
G + Y + + +C++ + L + + +G P A
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382
Query: 291 MELSRFVASQ----------------CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
++L ++ + C G + LL+A + KG L D F ++L++
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
YC ++D AI + + + DV TY+ +L+GL K + E+ + F + E + +
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPN 502
Query: 395 -SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC +++ +A+ +E+ G PD ++ VISGF
Sbjct: 503 IITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGF 548
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 149/365 (40%), Gaps = 46/365 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P++ N L+ L +Q + A L M ++G+SP+ +T++LV LC+ G
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 102 LGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL++ I + +N +ID Y K+ A L+ M + +TP TY+SIL+
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS-HGVTPDVITYNSILN 476
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K E D+ +T+ +MI ++ C I
Sbjct: 477 GLCKAAKPE-------------------------------DVMETF--KMIMEKGCLPNI 503
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++++L K +V EA+ + I RG+ + ++ C +E
Sbjct: 504 ----ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559
Query: 277 LLRDVVERGYIPC--AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L R + E+ Y C + + + K ++L + DKG DS+ +++
Sbjct: 560 LFRRM-EQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDG 618
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
+C ++ +K ++ + T+ +++ L R+ EAV I M VV
Sbjct: 619 FCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE 678
Query: 395 SSFVI 399
+ I
Sbjct: 679 AVVTI 683
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 7/293 (2%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S EG +LV++ G D + G++P + N L+D ++ ++
Sbjct: 390 SKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKM 449
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLV 118
A + +M GV+P+ T++ + LC++ K E V+ +++ G +++ YN++
Sbjct: 450 DNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNIL 509
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I+ K A D L E+ N R L P ++ +++ G + + ++ M E++
Sbjct: 510 IESLCKARKVTEALDLLEEIRN-RGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM-EQQ 567
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
H ++ + +I S+ A+ +F D+ + T M+ K G V
Sbjct: 568 YRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNS 627
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
E G + + +N LC +H+ E G++ +V G +P A+
Sbjct: 628 GYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 172/413 (41%), Gaps = 41/413 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++ S + D + LS ++ Y + + D ++V MR++GF P + AC LL++L +
Sbjct: 109 LVTSYDNPDVNAHILSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKD 168
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----LDSGIYSSVMY 115
Y M+R GV PN ++++ C+SG E L L S Y
Sbjct: 169 RLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTY 228
Query: 116 NLVIDFYSKKGDFGAAF---DRL------------NEMCNG-----------------RN 143
N +I YS+K A DR+ N + G ++
Sbjct: 229 NTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKD 288
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDYVIQKLSDMGKTY 202
++P TY++++DG R E + R+ +M K L H ++ + V++KL + G+
Sbjct: 289 VSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGL---HLGVATYNSVLRKLCEEGRIR 345
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + + K+E + TC ++ A K G +K A+++ + + G+ + Y A +
Sbjct: 346 DANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALI 405
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ C E LL +++ G P S V C G + LL L KG
Sbjct: 406 HGFCWVRDMESAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYC 465
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+D C +L+ C ++ A ++ + S D Y L +KDG+
Sbjct: 466 VDLSVCRALIRRLCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGK 518
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 15/221 (6%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC----KEHQPEEVCGLLRDV 281
++ A K G V++A Q L+ E + D Y + ++ K E +C ++D
Sbjct: 196 LIHACCKSGDVEKAEQ---LVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALC--VQDR 250
Query: 282 VER-GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ER G P + + + C +GK +E +L + K + + ++L++ YC
Sbjct: 251 MERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREI--KDVSPNHVTYTTLIDGYCRVND 308
Query: 341 IDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++A+ L K+ + KG L VATY+ +L L ++GR+ +A ++ + M E KV + +
Sbjct: 309 FEEALRL-CKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCN 367
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C + +++ A+K +ML G + D TYK +I GF
Sbjct: 368 TLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGF 408
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
++AIQ+ + G +N L K+ + V + ++ G +P +
Sbjct: 137 QDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVL 196
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ + C G ++ E+L+ + K + D + ++L+ Y +A+ + ++E+
Sbjct: 197 IHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGV 256
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAM 414
S D+ TY+ L+ G K+G+M EAV++F +E+K VS + ++ ++ C + + +A+
Sbjct: 257 SPDIVTYNSLIYGFCKEGKMREAVKLF---REIKDVSPNHVTYTTLIDGYCRVNDFEEAL 313
Query: 415 KNHDEMLKMGHKPDEATYKQVI 436
+ M G ATY V+
Sbjct: 314 RLCKVMEAKGLHLGVATYNSVL 335
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 43/275 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y F + L + ++M G V+ N++L L + IR A+ L M
Sbjct: 297 TTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGE 356
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
V P+ T + + C+ G + L +LD+G+ S Y +I + D +
Sbjct: 357 RKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMES 416
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L M + L+PG+ TYS ++DG GN+
Sbjct: 417 AKELLFCMLD-VGLSPGYCTYSWLVDGYCEL-------------------------GNEG 450
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I L D E + K C ++L C +++ L + RV A +IY + RG
Sbjct: 451 AIISLLD-------EFLTKGYC---VDLS--VCRALIRRLCHQERVGFAEKIYSTMHLRG 498
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ Y + K+ + V +L ++ +R
Sbjct: 499 VSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRS 533
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 167/373 (44%), Gaps = 17/373 (4%)
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYS 123
+ AM GV P++ T++ + L +G + + + D+ V YN++I Y
Sbjct: 196 WSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYC 255
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVE---KK 178
+ G A RL M L+P TY +++ Y + S R+ M E K
Sbjct: 256 RAGRAQDAMARLAHMREQAELSPDKVTYLTLMQ--LHYSEGTFSQCIRLFQEMEEMGMGK 313
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+P+H VI L GK + +F+R + ++ + K GR E
Sbjct: 314 DIPQH---AYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENE 370
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ ++ + G+ + Y VN LC+ + +E R+ VE+G A+ + +
Sbjct: 371 AMLLFERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLID 430
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G + +EL + KG + DS+C + L++ ++D A AL+ ++E
Sbjct: 431 GFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGCDQ 490
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNH 417
V TY +++DGLFK + EEA++ ++ M + + ++++F + LC + +A +
Sbjct: 491 TVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRACRIL 550
Query: 418 DEMLKMGHKPDEA 430
DE+ MG P+ A
Sbjct: 551 DELAPMGVIPETA 563
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 132/322 (40%), Gaps = 50/322 (15%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY---RQNEI 63
G+D A LV+ +G +GL V+ M G+ + AL+D + R+NE
Sbjct: 312 GKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEA 371
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF-EVVL---GLLDSGI-YSSVMYNLV 118
L L+ M G+ + T+ ++ LCR GK E +L ++ GI +++ Y +
Sbjct: 372 ML---LFERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSL 428
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID + K G A + EM + P Y+ ++DG
Sbjct: 429 IDGFGKAGMVDQAQELFEEM-KVKGFVPDSYCYNVLIDG--------------------- 466
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L+ G+ A ++KR D+ + T ++ L K+ + +E
Sbjct: 467 ----------------LAKAGRLDDACALYKRMEDDGCDQTVYTYTIIIDGLFKKHKNEE 510
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AI+ ++ + ++GIT + + F N LC + C +L ++ G IP +
Sbjct: 511 AIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRACRILDELAPMGVIPETAH-EDMIN 569
Query: 299 SQCGKGKWKEVEELLSAVLDKG 320
C G++K+ +L ++ KG
Sbjct: 570 VLCKAGRFKQACKLADGIVQKG 591
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 331 LMEYYCSNRQIDKAIA--LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L++ YC + A+A H++ E+ + S D TY L+ + +G + +R+F M+E
Sbjct: 250 LIKGYCRAGRAQDAMARLAHMR-EQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEE 308
Query: 389 L---KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ K + ++V+V+ LC + + + + MLK G+ A Y +I
Sbjct: 309 MGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALI 359
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 182/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A N ++D +++ ++ A L+ MV+ G+ P+ T+S V
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM +++
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSIL 323
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P ++++ +Y K + + + M K P F + N Y + L DM
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD- 382
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 383 -----LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G +P + C G + +EL+S +++ G+
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD S++ C ++ A + + D Y++L+DG G+ME+A+R
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557
Query: 382 IFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 189/457 (41%), Gaps = 46/457 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + + V++ MR +P V A N L+ +L + +I+ A ++ M G +P+
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360
Query: 82 KFTWSLVAQILCRSG-------KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFD 133
F+++++ G F+++LG GI + +N++I Y+ G A
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLG---DGIAPDIYTFNVLIKAYANCGMLDKAMI 417
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------- 184
NEM + P TY +++ R K + + M+++ ++P +
Sbjct: 418 IFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476
Query: 185 ---------------LSGNDY---------VIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ N +I L +G+ A+ IF + +
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ G++++A++++ + GI Y VN CK + +E L R+
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++++G P + + + G+ + + + G+ ++ S ++ NR
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
D+AI L ++ + +D+ T + ++ G+F+ R+EEA +F + +V + ++ I
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSI 716
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ L + +A M G +PD V+
Sbjct: 717 MITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 180/422 (42%), Gaps = 61/422 (14%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
GL +D + +++ GF A AL L+R E+ G P+ F++
Sbjct: 143 GLRVDAIIASHLLK--GFCEAKRTDEALDILLHRTPEL-------------GCVPDVFSY 187
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSS---VMYNLVIDFYSKKGDFGAAFDRLNEM 138
+++ + LC GK +++ + + G S V YN VID + K+GD A D EM
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 247
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
R + P TYSS++ + + ++ + MV K +LP ++ N +I S
Sbjct: 248 VQ-RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN--LIYGYSST 304
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ A +FK + I ++ +L K G++KEA ++ ++ +G ++ D
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG---QNPDV 361
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+++ +L GY KG ++ +L +L
Sbjct: 362 FSYTIML------------------NGY--------------ATKGCLVDMTDLFDLMLG 389
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
G+ D + + L++ Y + +DKA+ + ++ V TY ++ L + G+M++
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ F+ M + VV ++ ++ C L KA + E++ G + D + +I+
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 438 GF 439
Sbjct: 510 NL 511
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 153/383 (39%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 94 ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH 153
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K C++ Q D
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 222 --TC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C ++ KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V +G +P + + G+WKE + + + +L D ++LM
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 333 EYYCSNRQIDKA------------------IALHIKIEKLKGSL---------------- 358
C +I +A + + KG L
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 359 -DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D+ T++VL+ G +++A+ IF+ M++ V +++ V++ LC + ++ AM+
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGF 476
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 167/410 (40%), Gaps = 43/410 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY------------------- 110
+ GV P+K+ + + Q C G E++ ++++G+
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 111 -----------------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+V+YN+++D Y G A + M + + P Y +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVGYGT 576
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + + + M++K + P L + +I L + G+T A++ F +
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY--NIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I + T +L+ L K EAI ++ + + + + + + + EE
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + G +PCA+ S + + +G +E E++ S++ + G DS + ++
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 35/390 (8%)
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V+ N+++++ + + LC++GK FE++ L +G+ +V+ YN+++D K G AF
Sbjct: 7 VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
M G +TP T+ +++G R E+ VG+++++ + + +S N+ +
Sbjct: 67 RLKGRMEQG-GMTPSVVTFGILINGLARGERFGE----VGIVLQE--MEQLGVSPNEVIY 119
Query: 193 QKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+L G A +F +K++ T + KAL KEG ++ A +I +
Sbjct: 120 NELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLS 179
Query: 249 RGITVRDSDYYAFVN-VLCKEHQPEEVCGLLRDVVERGYIP-------CAMELSRFVASQ 300
G+TV + V +L + + E V + ++V RG P C EL + Q
Sbjct: 180 IGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQ 239
Query: 301 CGKGKW----------KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
G W KE +++ +L+KG+ LDS + ++ C + ++++AI LH
Sbjct: 240 EAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 299
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
+ + D+ T++ LL G+MEE + D MK + S+ ++ C K+
Sbjct: 300 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 359
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+RKA + E++ G KP+ Y +I G+
Sbjct: 360 IRKAKEYLTELMDRGLKPNVFIYNALIGGY 389
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 196/470 (41%), Gaps = 66/470 (14%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G E+ + G P V N L+DAL + + A L G M + G++P+ T+ ++
Sbjct: 30 GFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILIN 89
Query: 91 ILCRSGKFE---VVLGLLDS-GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
L R +F +VL ++ G+ + V+YN +I ++ +KG A +EM + +
Sbjct: 90 GLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVL-KKMK 148
Query: 146 PGFSTYSSILDGARRYEKTEVSDRI------VGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P TY+ I + + E ++RI +G+ V L F + +++Q+ +
Sbjct: 149 PTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL----FNTVVAWLLQRTRRLE 204
Query: 200 K--TYAAEMIFK---------RACDEKI---ELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ EM+ + AC ++ + G K L+K +KEA ++
Sbjct: 205 SVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQT 264
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +GI + Y + CK+ + EE L D+ RG+ P + + + C GK
Sbjct: 265 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 324
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA--------------------- 344
+E LL + +GL D ++++ +C + I KA
Sbjct: 325 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 384
Query: 345 -IALHIKIEKLKGSLDVA-------------TYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
I + + + G++D TY L+ + G +EEA IF +E
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 444
Query: 391 V-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V + + I++ C L ++ +A+ +EM G P++ TY ++ +
Sbjct: 445 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY 494
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
N ++ + +++ A L+G M R G P+ FT++ + C GK E LLD
Sbjct: 278 NIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKT 337
Query: 108 -GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G+ ++ Y +ID + K D A + L E+ + R L P Y++++ G R
Sbjct: 338 EGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMD-RGLKPNVFIYNALIGGYGRNGDIS 396
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ V M + P + G+ ++ + G A+ IF +A + ++L
Sbjct: 397 GAIDAVETMKSNGIQPTNVTYGS--LMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 454
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
M++ K G++ EA+ + + RGI+ Y + K EE L ++V G
Sbjct: 455 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 514
Query: 286 YIPCAMELSRFVASQCGKG 304
IP + +A KG
Sbjct: 515 VIPDNITYGTLIARCSEKG 533
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+ + L+ + +++++ C ++D + ++ + V TY+VL+D L K GR+EE
Sbjct: 5 RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64
Query: 379 AVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A R+ M++ + S +F I+++ L + + EM ++G P+E Y ++I
Sbjct: 65 AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 179/431 (41%), Gaps = 69/431 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D KG ++ ++ ++ G +P V C L+ L ++ I A+ L+ M +
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G PN T + + + LC+SG ++ L L + + + Y
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY-------------------- 475
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
G N P +YS I+DG + + + + + M ++P D +
Sbjct: 476 -----GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP-------DVI---- 519
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+Y + ++ + G+ K+A +++ + + G+
Sbjct: 520 -----SYTS---------------------LIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 553
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ + +++LCKE + E LL +++RG IP + + V C + E +L
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL------DVATYDVLLDG 369
+ G L D +LM+ C I A+ LH K+ G DV +Y +++DG
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K GR +EA +F MK L V+ + S+ ++ C +L A +EM+ G + +
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733
Query: 429 EATYKQVISGF 439
TY +I GF
Sbjct: 734 AVTYSVMIHGF 744
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/517 (20%), Positives = 211/517 (40%), Gaps = 97/517 (18%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++D + +G ++ E+ +M G + + + L+ L ++ I A+ L+ +M +
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIY------SSVMYNLVIDFYSKK 125
G P+ + + + LC++GK + L L D+ Y + V Y+++ID K
Sbjct: 75 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKD 134
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A + EM + + P +Y+S++ G R K E + + M++ + + +
Sbjct: 135 RREDEARELFKEM-KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI--RSDV 191
Query: 186 SGNDYVIQKLSDMGKTYAA----EMIFKRACDEKI------------------------E 217
+ + +I L GK A E++ +R C I
Sbjct: 192 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMS 251
Query: 218 LQDDTC-------GCMLKALSKEGRVKEAIQIYHLI----SERGITVRDS--DYYAFVNV 264
+Q C G ++K L + G + A+Q++ + GI + + Y ++
Sbjct: 252 MQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 311
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK----------------- 307
LCK+ + +E L +++ +G +P + + + C GKW+
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371
Query: 308 ------------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
E +LL V+ +G + D C++L++ C +I KA L +
Sbjct: 372 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFL 431
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-------VSSSSFVIVVS 402
K++KL +V T L+ GL + G ++ A+ + M ++ S+ I++
Sbjct: 432 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 491
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC +A + EM +G PD +Y +I GF
Sbjct: 492 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 198/494 (40%), Gaps = 89/494 (18%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+++ M+ G +P V + +L+ R + A CL+ M+ G+ + T S++ IL
Sbjct: 142 ELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDIL 201
Query: 93 CRSGK-------FEVVLG---LLDSGIYSSVM---------------------------- 114
C+ GK EV++ +LD YS+++
Sbjct: 202 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDA 261
Query: 115 --YNLVIDFYSKKGDFGAAFDRLNEMCN-----GRNLTPGFSTYSSILDGARRYEKTEVS 167
Y ++ + G+ A EM N G P +YS I+DG + + + +
Sbjct: 262 IAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 321
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ M + ++P + +I GK A+ +F D I+ T ++
Sbjct: 322 RELFKEMKAQGIMPD--VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ----------------- 270
L K+G+V EA ++ ++ +RG V LC +H+
Sbjct: 380 DMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 439
Query: 271 PEEV-CG-LLRDVVERGYIPCAMELSRFVASQ----------------------CGKGKW 306
P V C L++ + + G I A+EL + + S C G+
Sbjct: 440 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 499
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E EL + G++ D +SL+ +C + + A L ++ + DV T+ VL
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 559
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+D L K+G++ EA + + M + + ++ ++ +V LC + +A + +M K+G
Sbjct: 560 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 619
Query: 426 KPDEATYKQVISGF 439
PD TY ++ G
Sbjct: 620 LPDVVTYGTLMKGL 633
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/532 (20%), Positives = 216/532 (40%), Gaps = 107/532 (20%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S S+++D +G ++ E+ +M G + + + L+ L ++ I A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIY------SSVMY 115
+ L+ +M + G P+ + + + LC++G L L D+G Y + + Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
+++ID K A + EM + + P +Y++++ G K E + + M+
Sbjct: 306 SIIIDGLCKDRREDEARELFKEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKI--------------- 216
+ + P ++ + +I L GK A E++ +R C +
Sbjct: 365 DVGIQPD--VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422
Query: 217 ---------ELQD-------DTCGCMLKALSKEGRVKEAIQIYHLI----SERGITVRDS 256
++Q TC ++K L + G +K A++++ + S GI + +
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 257 --DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK------- 307
Y ++ LCK + +E L +++ G IP + + + C GKWK
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 542
Query: 308 ----------------------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
E ELL ++ +G + ++ ++L++ C N
Sbjct: 543 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS---- 395
+I +A L +K++KL DV TY L+ GL + G ++ A+ + K++S +
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK-----KMLSDTGQYG 657
Query: 396 --------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+ I++ LC +A + EM +G P+ +Y +I GF
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGF 709
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 174/417 (41%), Gaps = 23/417 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V+ L+D ++ ++ A+ L MV+ G + T+S + + LC +
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 102 LGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN-----GRNLTPGFSTY 151
L S G ++ Y ++ + G A EM N G P +Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
S I+DG + + + + + M + ++P + +I GK A+ +F
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPD--VISYTSLIHGFCRSGKWEKAKCLFNEM 182
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
D I T ++ L KEG+V EA ++ ++ +RG + Y + LC +H+
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E L + + G P A+ + C G +L +L+ C +L
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302
Query: 332 MEY------YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ Y C +R+ D+A L +++ DV +Y L+ G G+ E+A +F+
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362
Query: 386 MKELKV---VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M ++ + V++SS +++ LC ++ +A K + +++ G PD T ++ G
Sbjct: 363 MLDVGIQPDVTTSS--VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 151/350 (43%), Gaps = 17/350 (4%)
Query: 104 LLDSGIYSSVMYN-LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
+L GI V + ++ID + K+G A + L M R TYS+++ G
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQ-RGCILDIVTYSTLIKGL--CM 57
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE------KI 216
K +S+ M KKL + +++ L GK A + + ++ K
Sbjct: 58 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 117
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ + ++ L K+ R EA +++ + +G+ Y + ++ C+ + E+
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++++ G S + C +GK E ELL ++ +G +LD S+L++ C
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LK 390
+I +A L + ++KL D Y L+ GL + G + A+++ M +K
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ I++ LC + +A + EM G PD +Y +I GF
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 120/280 (42%), Gaps = 22/280 (7%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
G + + +A+S +++D G + E+++ M+ G +P V + +L+ R + +
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVI 119
A L+ MV GV P+ T+S++ +LC+ GK E++ ++ G I ++V Y ++
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
A +M P TY +++ G + + L + KK+
Sbjct: 596 KGLCMNDRISEATQLFMKM-QKLGCLPDVVTYGTLMKGL-----CQTGNIKTALELHKKM 649
Query: 180 LPKHFLSGNDY---------VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
L G ++ +I L G+ A +FK + + ++
Sbjct: 650 LSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGF 709
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ G++++A +++ + ++G+ + Y ++ CKE Q
Sbjct: 710 CRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 749
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
G + + D +S +++D G + E+++ M+ G +P V + +L+ R ++
Sbjct: 657 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 716
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
A L+ MV GV N T+S++ C+ G+ + L
Sbjct: 717 DAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 210/476 (44%), Gaps = 52/476 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+ +S + S ++D + +GL + VY M G V N+LL L R A
Sbjct: 391 EPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALH 450
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYS 123
++ M++ GV+P++ ++ + +L + G+F L L + + S+ +N +I+ +
Sbjct: 451 VWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFC 510
Query: 124 KKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K A F+R+ E+ P TY +++DG + E + ++ M ++ +L
Sbjct: 511 KMEKMIEAEETFNRMKEL----GFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P L + +I L KT + C + + T G ++ EGR+ +A
Sbjct: 567 PSIELYNS--LIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAF 624
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV------ERGY-------- 286
Y + E+G V+ L + + +E LL+ +V + GY
Sbjct: 625 TAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKAD 684
Query: 287 ---------------------IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+P ++ + +A C GK + +++ S++L +G D+
Sbjct: 685 DGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDN 744
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
F +L+ Y + ++ A +L ++ K + ++ TY+ L++GL K G ++ A ++FD
Sbjct: 745 FTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDK 804
Query: 386 MKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LK ++ + S+ I++ C R+A+ ++MLK G P TY +I GF
Sbjct: 805 L-HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGF 859
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 200/500 (40%), Gaps = 80/500 (16%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L Y KG+ + L V+ M G VP++ +CN LL +L R+ E A +Y + R
Sbjct: 153 MILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRL 212
Query: 77 GVSPNKFTWSLVAQILCRSG--------------------------------------KF 98
G+ P+ FT S++ C+ G +
Sbjct: 213 GIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERA 272
Query: 99 EVVLGLL-DSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E+VL L+ + GI + V L+I Y ++ A L EM + Y ++D
Sbjct: 273 EMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLID 332
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R K + + R+ M+ L F+ + +I G+ AE + R D +
Sbjct: 333 GYCRVCKMDDAVRLRDEMLNVGLRMNLFIC--NALINGYCKNGQVSEAERLLMRMVDWDL 390
Query: 217 E--------LQDDTC---------------------------GCMLKALSKEGRVKEAIQ 241
E L D C +LK L + G ++A+
Sbjct: 391 EPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALH 450
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++HL+ +RG+T + Y +++L K + L D++ RGY + + C
Sbjct: 451 VWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFC 510
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K E EE + + + G D +L++ YC +++A + K+EK +
Sbjct: 511 KMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIE 570
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDE 419
Y+ L+ GLFK + E + + M LK +S + ++ +++ C L KA + +
Sbjct: 571 LYNSLIGGLFKSKKTREVMDLLSEMC-LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFD 629
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G P+ +++S
Sbjct: 630 MIEKGFAPNVIICSKIVSSL 649
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 184/445 (41%), Gaps = 32/445 (7%)
Query: 17 LVLDCYSHKGLFMDGL-EVYRM---------MRVYGFVPAVSACNALLDALYRQNEIRLA 66
+VLD Y++ G+ +DG V +M M G + CNAL++ + ++ A
Sbjct: 320 MVLDEYAY-GVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEA 378
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDF 121
L MV + P +++S + CR G V +L GI S+V+ +N ++
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKG 438
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ G F A + M R +TP +Y ++LD + + + L + +L
Sbjct: 439 LCRVGAFEDALHVWHLMLK-RGVTPDEVSYCTLLDLLFK-----MGEFFRALALWNDILA 492
Query: 182 KHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ + + +I M K AE F R + E T ++ K G V+E
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++ + + I Y + + L K + EV LL ++ +G P + +A
Sbjct: 553 AFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIA 612
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C +G+ + +++KG + CS ++ +ID+A L K+ L L
Sbjct: 613 GWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFL 672
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYM----KELKVVSSSSFVIVVSRLCHLKELRKAM 414
D +D L DG ++ +I D + K + +S + I ++ LC ++ A
Sbjct: 673 DHGYFDRLHKA--DDGNLDSQ-KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAK 729
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
K +L G PD TY +I G+
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGY 754
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 174/444 (39%), Gaps = 44/444 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD G F L ++ + G+ + A N +++ + ++ A + M G
Sbjct: 470 LLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG 529
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
P+ T+ + C+ G F+V + I S+ +YN +I K
Sbjct: 530 FEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVM 589
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D L+EMC + L+P TY +++ G + + + M+EK P + ++
Sbjct: 590 DLLSEMC-LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSK--IV 646
Query: 193 QKLSDMGKTYAAEMIFKRACD----------EKIELQDD--------------------- 221
L +G+ A M+ ++ + +++ DD
Sbjct: 647 SSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSL 706
Query: 222 ----TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ L K G+V +A +I+ + RG + + Y ++ + L
Sbjct: 707 PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSL 766
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++++RG P + + + C G ++L + KGL + + L++ YC
Sbjct: 767 RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCK 826
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
N +A+ L K+ K S + TY L+ G K G M +A + D M+EL + +
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAK 886
Query: 397 FVIVVSRLCHLKELRKAMKNHDEM 420
FV +V E++K K H+ M
Sbjct: 887 FVKLVEGHVKCGEVKKIAKLHNMM 910
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 173/379 (45%), Gaps = 22/379 (5%)
Query: 69 LYGAMV-RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFY 122
LY MV RD V P FT+ + A+ LCR G+ + L LL + +V+Y VI
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204
Query: 123 SKKGDFGAAFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+G A LNEM C +T+ ++ G + + R+V M+ K
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAA-----DVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 259
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+P G +++Q L + + A + R + + L + G L EG++ E
Sbjct: 260 CMPGVMTYG--FLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLA----EGKLAE 313
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++Y + +G Y ++ LCK + LLR++ ++G+ P + + +
Sbjct: 314 ATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH 373
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
S C G W + LL + KGL L+S + ++ C + ++D+A+ L ++ +
Sbjct: 374 SFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 433
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D+ +Y+ ++ L + +MEEA +F+ + E VV++ ++ ++ L + A++
Sbjct: 434 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 493
Query: 418 DEMLKMGHKPDEATYKQVI 436
EM+ G D +Y +I
Sbjct: 494 KEMILHGCSLDVVSYNGLI 512
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 13/231 (5%)
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+++ T G +AL + GR EA+ + ++ G Y ++ LC + E
Sbjct: 153 DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 212
Query: 274 VCGLLRDVVERGYIPCAMELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
LL +++ G CA +++ F V CG G+ +E L+ ++ KG +
Sbjct: 213 AATLLNEMLLMG---CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 269
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L++ C RQ D+A A+ ++ +L +V ++ ++ G +G++ EA +++ M LK
Sbjct: 270 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMG-LK 324
Query: 391 --VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I++ LC L + A++ EM K G P+ TY V+ F
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 375
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 8/328 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + E+Y M + G P + L+ L + I A L M + G +PN T
Sbjct: 308 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVT 367
Query: 85 WSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++V C++G ++ LL+ G+ +S YN +I K G A + EM
Sbjct: 368 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM- 426
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P +Y++I+ E+ E ++ + ++E+ ++ + +I L G
Sbjct: 427 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY--NTIIHALLRDG 484
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A + K L + ++KA+ K+G V ++ + ++E+GI + Y
Sbjct: 485 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYN 544
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ LCKE + + L + ++ +G P + + + C G LL + ++
Sbjct: 545 ILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 604
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+ D + L+ ++C R +D A L
Sbjct: 605 NVHPDIITYNILISWHCKVRLLDDAAML 632
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 160/396 (40%), Gaps = 66/396 (16%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P+ S+ NALL L + LA + + +R VSP+ +T++ V LCR G+
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR----- 208
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
K GD L P +TY+S++DG
Sbjct: 209 -------------------KAGDVAKDI-------KAWGLAPSVATYNSLIDG------- 235
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
K G Y +M+ K + I T G
Sbjct: 236 ---------------------------YCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ K A++++ + ++GI Y + ++ LC E + EE L+ ++ +
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + C KG + + + + ++ + D + L++ Y +++ A
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+A+ + K S +V TY+ L+ G + G A + D MKE + + ++ +++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC E+RKA+K DEM ++G +P+ TY +I GF
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 155/363 (42%), Gaps = 48/363 (13%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQ---NEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+V + ++ +G P+V+ N+L+D ++ + L MV G+SP T+ ++
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 90 QILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C++ + + + GI +SV+ YN +I +G + EM L
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM-EDLGL 330
Query: 145 TPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+P T+ +L G ++ + +D I G M E+ + P D VI +
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDG-MTERNVEP-------DVVIYNI-------- 374
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
++ + G++++A+ + ++++GI+ + Y +
Sbjct: 375 ----------------------LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLIT 412
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ GLL ++ E+G + + + + C KG+ ++ +LL + + GL
Sbjct: 413 GFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ +++++ +C I A + ++EK + +V TY+V + + G+M+EA +
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Query: 384 DYM 386
+ M
Sbjct: 533 NEM 535
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 14/300 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P L++ + + A ++ M + G++ + T++ + LC GK E
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 102 LGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L+ D G+ + + + V+ + KKG A D ++ M RN+ P Y+ ++D
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE-RNVEPDVVIYNILID 377
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
RR K E + + M +K + P ++ + +I S G +A + ++ I
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPN--VTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE---E 273
E T ++ AL +G V++A+++ +SE G+ Y + C + + E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ + +R + + + F+ C GK E +LL+ +LDK L+ + ++ E
Sbjct: 496 IRTRMEKCRKRANV---VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKE 552
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL + KG+ D + M P V N L+D R ++ A + AM + G
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
+SPN T++ + RSG + GLLD GI + V+ YN++I KG+ A
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG 157
L+EM L P TY++I+ G
Sbjct: 460 KLLDEMSE-VGLEPNHLTYNTIIQG 483
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 120/287 (41%), Gaps = 8/287 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ Y + V+ M+ G +V N+L+ L + ++
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDF 121
L M G+SPN+ T+ V + C+ G + + G+ + + V+YN++ID
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDV 378
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y + G A + E + ++P +TY+ ++ G R + ++ M EK +
Sbjct: 379 YRRLGKMEDAM-AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI-- 435
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + + +I L G+ A + + +E T +++ +G +K A +
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
I + + Y F+ C+ + +E LL +++++ +P
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 8 RDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R+ + D + ++++D Y G D + V M G P V+ N L+ R + R
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID 120
AS L M G+ + T++++ LC G+ + LLD G+ + + YN +I
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482
Query: 121 FYSKKGDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ KG+ +A++ M C R TY+ + + K + ++ ++ M++K
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKR---ANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
L+P +G Y K M K Y ++ R C
Sbjct: 540 LVP----NGITYETIKEGMMEKGYTPDI---RGC 566
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 199/477 (41%), Gaps = 88/477 (18%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
R+ +DA+ + C L + + R +GF +V NALLD R R A
Sbjct: 81 REISTDAVVKIFQCLKDADLAWELFQCLSSPR-FGFQHSVHTGNALLDVFARTKRHREAG 139
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSV-MYNLVIDF 121
L + P+ TW+++ C + + E ++ D G+ S+ +NLV+
Sbjct: 140 NLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHG 199
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G AA D + R++ +T+S +++G + G+M++
Sbjct: 200 LCKSGKVLAAMDHFEAV--RRSMPVSAATFSILINGLVK----------AGMMIQ----- 242
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
H L+ Q+ + G T I++ T ++ L+K +++EA+
Sbjct: 243 AHSLA------QETTTNGCT--------------IDIHTYT--AIVNWLAKNKKIQEAVA 280
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ I+ G T + Y A +N LCK + EE LLR +V+ G P + + +
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID--- 337
Query: 302 GKGKWK---EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G GK K E +L + +GL LD+ C ++L+ +I +A +++ +
Sbjct: 338 GLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVP 397
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-----KVVSSS------------------ 395
DV T ++DGL K GR+ AVRIF M+ +VV S+
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 457
Query: 396 -------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC ++ A DEML+ G KPD TY +ISG
Sbjct: 458 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGL 514
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 181/430 (42%), Gaps = 15/430 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+LVL G + ++ + +R V A + + L++ L + + A L
Sbjct: 194 NLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAAT-FSILINGLVKAGMMIQAHSLAQETTT 252
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
+G + + T++ + L ++ K + + L++ +G ++ YN +++ K G
Sbjct: 253 NGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 312
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L ++ + TP TY+S++DG + +++ + ++ M + L
Sbjct: 313 AIDLLRKIVDN-GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCY--TA 369
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ L GK A ++K T M+ LSK GR+ A++I+ + RG
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + Y A ++ LCK + + +L + + P + + + C G +
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L+ G D + + L+ C D A + ++ + S V Y L+DGL
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGV---LDDMSSSRFV--YSSLVDGL 544
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K G++E +F M+ V +S + ++ LC + +A+ + + K G P
Sbjct: 545 CKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPY 603
Query: 431 TYKQVISGFM 440
Y +IS +
Sbjct: 604 AYNSIISALI 613
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 22/278 (7%)
Query: 8 RDSQSDALSLVLDCYSH--KGLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++ S L+L CY+ +GL G VY+ M +G VP V + ++D L +
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMY 115
I A ++ +M G++PN+ +S + LC++ K + L +L ++ Y
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N++ID K GD AA +EM P TY+ ++ G + T+ + ++ M
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEA-GCKPDVYTYNILISGLCKAGNTDAACGVLDDMS 531
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ + + G L GK M+F + T ++ L K R
Sbjct: 532 SSRFVYSSLVDG-------LCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANR 583
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
V EA+ +++ I + G+ Y + ++ L K + E
Sbjct: 584 VDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVNE 620
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 149/359 (41%), Gaps = 16/359 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + +++ R + G P V +L+D L ++ A L+ M G++ + +
Sbjct: 308 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCY 367
Query: 86 SLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + L ++GK V + G + V + +ID SK G GAA R+ +
Sbjct: 368 TALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV-RIFKSME 426
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R L P YS+++ G + K + + ++ M + P + +I L G
Sbjct: 427 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY--NILIDGLCKSGD 484
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
AA F + + T ++ L K G A + +S Y +
Sbjct: 485 VEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSS 539
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
V+ LCK + E C L ++ ER + + +R + C + E L +A+ +G
Sbjct: 540 LVDGLCKSGKLEGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ + +S++ + ++++ A++ ++ + D TY+ LL+G+ RM+ A
Sbjct: 599 MP-HPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKP-DRVTYNALLNGMIGANRMDRA 655
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 192/456 (42%), Gaps = 62/456 (13%)
Query: 1 MIQSCEGRDSQSDA--LSLVLDCYSHKGLFMDGLEVYRMMR----VYGFVPAVSACNALL 54
++Q GR D +LVL+ +G +D E R++R +G P V + NA+L
Sbjct: 175 VLQDLHGRGCALDVGNCNLVLNAVCDQGGSVD--EALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 55 DALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIY 110
L L MVR G PN T++ + LCR+G FE V+ ++D G
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292
Query: 111 SSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEV 166
+ MY V+D K+G A + L+ M L P Y+++L G A R+E+ E
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRM-PSYGLKPNVVCYNTVLKGLCSAERWEQAE- 350
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+LL + F D L D T +
Sbjct: 351 -----------ELLAEMF----------------------------DNDCPLDDVTFNIL 371
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ + G V I++ + E G Y +N CKE +E LL+ + G
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + + + C +W + E+L+S ++++G + ++++ + C +++AI
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE 491
Query: 347 LHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSR 403
L +K L G S D+ +Y ++DGL K G+ +EA+ + + M K +S ++ + + S
Sbjct: 492 L-LKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN-KGMSPNTIIYSSIASA 549
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L + + ++ D + + + D Y VIS
Sbjct: 550 LSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + GL +E+ M +G VP V +++ ++ I A L +M
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDF 128
G PN ++++V + LC + ++ +++ +++ G + V +N VI+F KKG
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486
Query: 129 GAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L +M NG +P +YS+++DG + KT+ + ++ +MV K + P +
Sbjct: 487 EQAIELLKQMLLNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII-- 542
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y++ + ALSKEGR+ IQ++ I
Sbjct: 543 --------------YSS---------------------IASALSKEGRINRVIQMFDNIQ 567
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ I Y A ++ LCK + L +V G +P + + +G K
Sbjct: 568 DVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVK 627
Query: 308 EVEELLSAVLDKGLLLDSF 326
E +E+L+ + KG L F
Sbjct: 628 EAQEMLTELCSKGALRKHF 646
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 12/190 (6%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK---GKWKEVEELLS 314
Y+ V LC + + +L ++ RG P + + C + G ++ +L
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQ 177
Query: 315 AVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFK 372
+ +G LD C+ ++ C +D+A+ L + G DV +Y+ +L GL
Sbjct: 178 DLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCM 237
Query: 373 DGRMEEAVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
R R+ D M+E+ V +F ++ LC + + +M+ G PD
Sbjct: 238 AKRWG---RVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPD 294
Query: 429 EATYKQVISG 438
Y V+ G
Sbjct: 295 IRMYATVLDG 304
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 169/372 (45%), Gaps = 14/372 (3%)
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFD 133
SP+ +++V LCR + + +L+ + + V YN+ ID K AF
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
L +M + + P TY++++DG + + + + ++ MVEK P L VI
Sbjct: 64 LLKKM-DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPT--LKTYTVVID 120
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER---G 250
LS G+ A IF ++K L K G+ +EA +Y + R
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180
Query: 251 ITVRDS-DYYAFVNVLCKEHQPEEVCGLLRD-VVERGYIPCAMELSRFVASQCGKGKWKE 308
V D Y + ++ LCK + E + D VERG+IP A+ + + C G+ +E
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E + ++G D+ ++L++ + + I KA ++ ++ + + TY+++LD
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+ EA F M+E V++ ++ ++ C + A++ ML G +P
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360
Query: 428 DEATYKQVISGF 439
+ +Y +I G
Sbjct: 361 NLVSYNIIIRGL 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 6/240 (2%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +RA E T + L K RV +A Q+ + E+ Y A V+ L
Sbjct: 29 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 88
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + +E +L +VE+G P + + G+ +E + +L G D+F
Sbjct: 89 KAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 148
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLK----GSLDVATYDVLLDGLFKDGRMEEAVRI 382
++L++ C + + ++A AL+ + K DV TY L+DGL K GR+ EA ++
Sbjct: 149 VYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQV 208
Query: 383 FD--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
FD ++ + + ++ ++ LC L + + + EM G++PD TY +I GFM
Sbjct: 209 FDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 268
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 179/442 (40%), Gaps = 50/442 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + A +++ L R+ + A + VR G P+ T+++ LC++ + + L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 105 LDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + ++V Y ++D K G A L +M N +P TY+ ++DG
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-SPTLKTYTVVIDGLS 123
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK---- 215
+ + E + RI M+ P F+ +I+ L GK A ++K A K
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTA--LIKGLCKSGKPEEAYALYKEANARKHHAT 181
Query: 216 --------IELQDDTC--GCMLKA--------------------------LSKEGRVKEA 239
L D C G +L+A L K GRV+E
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ +H + RG Y A ++ K + + R +++ G + + + +
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ E A+ ++G + S+LM+ +CS + A+ L ++ +
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCH-LKELRKAMKNH 417
+ +Y++++ GL + G++ +A F+ + + ++ +F + LC L + ++
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+ M+ G P+ +Y ++ G
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGI 443
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 169/422 (40%), Gaps = 21/422 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++ + M +P AL+D L + + A + MV G SP T+++V
Sbjct: 60 DAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVI 119
Query: 90 QILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR-- 142
L ++G+ E + + +L +G + +Y +I K G A+ E N R
Sbjct: 120 DGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE-ANARKH 178
Query: 143 --NLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
P TY+S++DG R E +V D VE+ +P + +I L
Sbjct: 179 HATAVPDVVTYTSLIDGLCKAGRILEARQVFD---DEAVERGFIPDAVTYTS--IIDGLC 233
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+G+ F + E T ++ K + +A ++Y + + G V
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ LCK + E + ERG + + S + C +G EL +
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD-GR 375
LD+G + + ++ C ++ KA K+ + + DV T++ L GL +
Sbjct: 354 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDT 413
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+ + V +F+ M + S+ I++ +C L A++ EM+ G PD +
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNT 473
Query: 435 VI 436
+I
Sbjct: 474 LI 475
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/443 (18%), Positives = 161/443 (36%), Gaps = 47/443 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D G + + V M G P + ++D L + + A ++ M+
Sbjct: 81 TALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLG 140
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---------SGIYSSVMYNLVIDFYSKKG 126
+G P+ F ++ + + LC+SGK E L + + V Y +ID K G
Sbjct: 141 NGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAG 200
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A ++ R P TY+SI+DG + + E M + P
Sbjct: 201 RILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 260
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I A ++++ + T +L L K GRV EA + +
Sbjct: 261 AA--LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 318
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
ERG Y A ++ C E L R +++RG P + + + C GK
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN-RQIDKAIALHIKIEKLKGSLDVATYDV 365
+ +L + L D + ++ + C + + L + S ++ +Y +
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438
Query: 366 LLDGL------------FKD-----------------------GRMEEAVRIFDYMKELK 390
L+DG+ F++ GR++EA+ +F ++
Sbjct: 439 LMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS 498
Query: 391 VVSSSSFVIVVSRLCHLKELRKA 413
+ S+ ++ L + + +A
Sbjct: 499 APDAWSYWSLLDGLSRCERMEEA 521
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 45 PAVSACNALLDAL-YRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P V NA L L R + + L+ +MV G SPN ++S++ +CR+G EV L
Sbjct: 395 PDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALE 454
Query: 104 ----LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
++ G+ V+ +N +I + G A + E+ R P +Y S+LDG
Sbjct: 455 IFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL--ERRSAPDAWSYWSLLDGL 512
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHF 184
R E+ E + + M + P+H+
Sbjct: 513 SRCERMEEARLLSFHMKLQGCAPRHY 538
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 193/427 (45%), Gaps = 26/427 (6%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S +++D +G+ +D L+++ M G VP V LL +L + I A L
Sbjct: 212 PNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRL 271
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG---LLDSGIYSS--VMYNLVIDFYSK 124
+M +G P++ T+++ LC++G+ + LL G ++ + Y+ +ID +
Sbjct: 272 LCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQ 331
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G F EM G++++P + Y+ ++ +T+ + ++ M +K +P F
Sbjct: 332 AGRFDEGLSYYTEML-GKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTF 390
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+++ L D+G A+ + + L T M+ L K+G + +A+Q++
Sbjct: 391 CYNT--LLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFD 448
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM------------- 291
+ E G Y A ++ L + EE +L +E G P
Sbjct: 449 EMGEHGCHPTVMTYNALIDGLYRAGMLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDT 507
Query: 292 -ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
L + V C G+ + +LL +++ G++ D ++L+ C + +D A+ L +
Sbjct: 508 ESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKE 567
Query: 351 IEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLK 408
++ LKG S D TY L+DGL++ R +A +F + ++ S + ++ LC +K
Sbjct: 568 LQ-LKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMK 626
Query: 409 ELRKAMK 415
+L +A+
Sbjct: 627 KLSQAIN 633
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 178/452 (39%), Gaps = 57/452 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S A ++ +S G + +E + M + P NA+ L + I LA
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
LY MV G PN T+ ++ LC+ G + +D
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRG--------------------MAVD------ 232
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH--- 183
A +EM R + P Y+ +L + E + R++ M E P
Sbjct: 233 ----ALKMFDEMLE-RGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTY 287
Query: 184 --FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
FLSG L G+ A F+ D L C++ L + GR E +
Sbjct: 288 TVFLSG-------LCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLS 340
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
Y + + I+ + Y + + + ++ LL ++ ++G++P + + +
Sbjct: 341 YYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALF 400
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G + L+S +L ++LDS + ++ C IDKA+ + ++ + V
Sbjct: 401 DVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVM 460
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMK--------------ELKVVSSSSFVIVVSRLCHL 407
TY+ L+DGL++ G +EEA +F M+ +V + S +V +C
Sbjct: 461 TYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQS 520
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ KA K +++ G PD TY +I+G
Sbjct: 521 GQVLKAYKLLRGIIESGVVPDVVTYNTLINGL 552
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 179/411 (43%), Gaps = 42/411 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ ++ G D + M+ GFVP N LL AL+ I A L M++
Sbjct: 358 TILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQ 417
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGA 130
+ V + T +++ LC+ G + + + D G + +VM YN +ID + G
Sbjct: 418 NNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEE 477
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++M G N P S + + GA + TE ++V M +
Sbjct: 478 ARMLFHKMEMGNN--P--SLFLRLTLGANQVRDTESLRKLVDGMCQS------------- 520
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
G+ A + + + + T ++ L K + A++++ + +G
Sbjct: 521 --------GQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKG 572
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I+ + Y ++ L + H+ + L ++++ G P + + S C + K++
Sbjct: 573 ISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLC---RMKKLS 629
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ------IDKAIALHIKIEKLKGSLDVATYD 364
+ ++ LD L + S E + R+ +D+ + IKI+++ GSL+ Y
Sbjct: 630 QAINLWLD--YLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYT 687
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFVIVVSRLCHLKELRKAM 414
+ + GL + ++++A+RIF ++E VV+ + ++++ LC + L A+
Sbjct: 688 IWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAV 738
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 162/360 (45%), Gaps = 11/360 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ V N LL L R++ AS ++ M+ P+ FT++++ + LCRS + E
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 102 LGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL + +YN +I YSK DFG AF L EM L P TY++I+D
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCL-PTVVTYTNIVD 120
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + E+T + +++ M +K P + + +++ L + K A+ + +
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTY--NVIVEGLCEERKLDEAKKMLEEMAVRGY 178
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T +K L K RV EA + ++ +T Y +N LCK +
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARK---FLARMPVTPDVVSYTTVINGLCKSGDLDSASR 235
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+L + RG P + S + C G+ + LL ++L G + +SL+
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
I KA + +++E+ + DV +Y+ +DGL K R+++A +FD M E ++S
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 183/425 (43%), Gaps = 53/425 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +++ MR G P + N +++ L + ++ A + M G P+ T++
Sbjct: 130 DAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFI 189
Query: 90 QILCRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ LC+ + + L + V Y VI+ K GD +A L+ M N R TP
Sbjct: 190 KGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN-RGCTPD 248
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TYSS++DG + K +R +GL+ + +
Sbjct: 249 VVTYSSLIDG---FCKGGEVERAMGLL------------------------------DSM 275
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
K C + + +L AL + G + +A + + RG T Y A ++ LCK
Sbjct: 276 LKLGCRPNMVAYNS----LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVA----------SQCGKGKWKEVEELLSAVL 317
+ ++ + +VERG P A S + C G++ E L S VL
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Query: 318 DKGLL-LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
D+ + D F + +++ +C RQIDKA+ +H ++ + K +V T+++L+ GL D R+
Sbjct: 392 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-KNCCNVVTWNILVHGLCVDDRL 450
Query: 377 EEA-VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A + + E + ++ +V +C + A++ +E +K G PD TY +
Sbjct: 451 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 510
Query: 436 ISGFM 440
I+G +
Sbjct: 511 ITGLV 515
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 165/391 (42%), Gaps = 41/391 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E + + P V + +++ L + ++ AS + M G +P+ T+S +
Sbjct: 200 EARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259
Query: 93 CRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G+ E +GLLDS + + V YN ++ + G G A D L EM R TP
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM-ERRGFTPD 318
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+Y++ +DG + E+ + + + MVE+ P + + Y + + + T
Sbjct: 319 VVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP----NASSYSMLIVDILLYTV----- 369
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY-AFVNVLC 266
+L L K GR EA ++ + + I D +Y ++ C
Sbjct: 370 ------------------LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 411
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K Q ++ + + ++E+ + + V C + + E +L ++D+G + D
Sbjct: 412 KRRQIDKALQIHKQMLEKNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV 470
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFD 384
+L++ C + A AL + E +KG DV TY L+ GL + EEA +F
Sbjct: 471 TYGTLVDAMCKCGK--SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT 528
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
+ E + V + ++ R LK L K K
Sbjct: 529 KLVERRWVPDDKTLGLLHR--KLKLLNKPRK 557
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 2/236 (0%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A +F+ D+ + T +L+ L + ++++A ++ + E G D+ Y A ++
Sbjct: 26 ASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALIS 85
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
K + L ++V+ +P + + V C + ++ +LL + DKG
Sbjct: 86 GYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSP 145
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ + + ++E C R++D+A + ++ DV TY+ + GL K R++EA +
Sbjct: 146 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL 205
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M V S + V++ LC +L A + D M G PD TY +I GF
Sbjct: 206 ARMPVTPDVVS--YTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 43/313 (13%)
Query: 13 DALSLVLDCYSHKGL-------------FMDGLEVYRMMRVY------GFVPAVSACNAL 53
D+ S +LD S++G F G EV R M + G P + A N+L
Sbjct: 231 DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 290
Query: 54 LDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI---- 109
L AL+R I A + M R G +P+ +++ LC++ + + + D +
Sbjct: 291 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350
Query: 110 ------YSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
YS ++Y +++D K G F A +++ + + P Y+ +LD
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410
Query: 159 RRYEKTEVSDRIVGLMVEK---KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ + + + +I M+EK ++ + L V +LSD AE + DE
Sbjct: 411 CKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSD------AETMLLTMVDEG 464
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T G ++ A+ K G+ A++++ + G Y A + L E+ EE
Sbjct: 465 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 524
Query: 276 GLLRDVVERGYIP 288
L +VER ++P
Sbjct: 525 LLFTKLVERRWVP 537
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
+V TY+ LL L ++ R ++A +F M + + +F I++ LC +L KA K
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
M +MG PD+A Y +ISG+
Sbjct: 66 GRMKEMGCVPDDAIYNALISGY 87
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIV 400
DKA A+ ++ D T+ +LL GL + ++E+A ++ MKE+ V + + +
Sbjct: 24 DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S K+ +A K EM+K P TY ++ G
Sbjct: 84 ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 185/434 (42%), Gaps = 39/434 (8%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++ M+ G +P V + L+ + A CL+ M+ G+ P+ T S++ +L
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538
Query: 93 CRSGK-------FEVVLG---LLDSGIYSSVMYNLVIDF-YSKKGDFGAAFDRLNEMCNG 141
C+ GK EVV+ +LD ++++ L + SK +L M
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM--- 595
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND---------YVI 192
P T ++++ G + +++ L + K +L G + +I
Sbjct: 596 ----PNVVTCATLMKGLCQSGNIKIA-----LELHKNMLSDTSPYGINCKPNAISYSIII 646
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L G+ A +FK + + ++ + G+ K+A +++ + + G+
Sbjct: 647 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 706
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ + +++LCKE + E LL +++RG IP + + V C + E +L
Sbjct: 707 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 766
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL------DVATYDVL 366
+ G L D +LM+ C I A+ LH K+ G DV +Y ++
Sbjct: 767 FMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSII 826
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+DGL K GR +EA +F MK L V+ + S+ ++ C +L A +EM+ G
Sbjct: 827 IDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 886
Query: 426 KPDEATYKQVISGF 439
+ + TY +I GF
Sbjct: 887 QLNAVTYSVMIHGF 900
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 195/452 (43%), Gaps = 34/452 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D +G ++ E+ +M G + + + L+ L ++ I A+ L+ +M +
Sbjct: 58 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIY------SSVMYNLVIDFYSK 124
G P+ T+ + + LC++G + L L D+G Y + + Y+++ID K
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 177
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + EM + + P +Y+S++ G K E + + M++ + P
Sbjct: 178 DRREDEARELFKEM-KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVT 236
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
SG +I GK A + + L T ++K L + R+ EA Q++
Sbjct: 237 TSG--VLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFM 294
Query: 245 LISERGITVRDSDYYAFVNVLCKE-------HQPEEVCGLLRDVVERGYI---PCAMELS 294
+ + G Y + LC+ H +E +L D + G P S
Sbjct: 295 SMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQE---MLNDTSQYGIKCIRPDVTTSS 351
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C +GK E ELL ++ +G +LD S+L++ C +I +A L + ++KL
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE------LKVVSS-SSFVIVVSRLCHL 407
D TY L+ GL + G + A+++ M +K + S+ I++ LC
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 471
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A + +EM G PD +Y +I GF
Sbjct: 472 RREDEARELFEEMKAQGIMPDVISYTTLIHGF 503
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 216/523 (41%), Gaps = 107/523 (20%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D +G ++ E+ +M G + + + L+ L ++ I A+ L+ +M +
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIY------SSVMYNLVIDFYSK 124
G P+ T+ + + LC++G + L L D+G Y + + Y+++ID K
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + EM + + P +Y++++ G K E + + M++ + P
Sbjct: 471 DRREDEARELFEEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD-- 527
Query: 185 LSGNDYVIQKLSDMGKTYAA----EMIFKRACD--------------------------- 213
++ + +I L GK A E++ +R C
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587
Query: 214 --EKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLI----SERGITVRDS--DYYAFVN 263
+K+ + TC ++K L + G +K A++++ + S GI + + Y ++
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK---------------- 307
LCK + +E L +++ G IP + + + C GKWK
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707
Query: 308 -------------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
E ELL ++ +G + ++ ++L++ C N +I +A L
Sbjct: 708 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLF 767
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------------S 396
+K++KL DV TY L+ GL + G ++ A+ + K++S + S
Sbjct: 768 MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK-----KMLSDTGQYGTNFKPDVIS 822
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ I++ LC +A + EM +G P+ +Y +I GF
Sbjct: 823 YSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGF 865
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 163/344 (47%), Gaps = 26/344 (7%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD---- 76
C H+ +++ M+ G +P V C L+ L + I++A L+ M+ D
Sbjct: 574 CMKHR--ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631
Query: 77 GVS--PNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFG 129
G++ PN ++S++ LC+ G+ + L G+ V+ Y +I + + G +
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A NEM + + P +T+S ++D + K ++ ++ +M+++ +P
Sbjct: 692 DAKYLFNEMVD-IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT- 749
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYH-LI 246
+++ L + A +F + +K+ D T G ++K L + G +K A++++ ++
Sbjct: 750 -LVKGLCMNDRISEATQLFMKM--QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 247 SERGI--TVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
S+ G T D Y ++ LCK + +E L +++ G IP + + + C
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
GK ++ + L + ++D+G+ L++ S ++ +C QIDKA+
Sbjct: 867 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 171/406 (42%), Gaps = 34/406 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++D KG ++ ++ ++ G + V C L+ L ++ I A+ L+ M +
Sbjct: 532 SVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK 591
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G PN T + + + LC+SG ++ L L + + + Y
Sbjct: 592 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY-------------------- 631
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
G N P +YS I+DG + + + + + M ++P + +I
Sbjct: 632 -----GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPD--VISYTSLIHGF 684
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
GK A+ +F D ++ T ++ L KEG+V EA ++ ++ +RG
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y V LC + E L + + G +P + + C G K EL
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 804
Query: 316 VL-DKG-----LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L D G D S +++ C + + D+A L +++ L +V +Y L+ G
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 864
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
+ G++E+A +F+ M + V +++ ++ +++ C ++ KA+
Sbjct: 865 FCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS---------RFVASQCGKGKWKE 308
+ +N LC + E + ++ RGYIP + S + C +GK E
Sbjct: 13 FNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIE 72
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
ELL ++ +G +LD S+L++ C +I +A L + ++KL D TY L+
Sbjct: 73 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 132
Query: 369 GLFKDGRMEEAVRIFDYMKE------LKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
GL + G + A+++ M +K + S+ I++ LC + +A + EM
Sbjct: 133 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 192
Query: 422 KMGHKPDEATYKQVISGF 439
G PD +Y +I GF
Sbjct: 193 AQGMMPDVISYTSLIHGF 210
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV---------LLDGL 370
GL DSF + L+ C+ +++++ +A I + D+ TY + L+D L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 371 FKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
K+G++ EA + + M + L +V+ S+ + LC + +A M K+G +
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTL---IKGLCMEHRISEATWLFMSMQKLGCR 121
Query: 427 PDEATYKQVISGF 439
PD TY ++ G
Sbjct: 122 PDAITYGTLMKGL 134
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 195/460 (42%), Gaps = 52/460 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD Y +G LE+ M+ G P N L++ L ++ E+ A L M+ G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----------YSSVMYNL---------- 117
++ + +T++ + C+ G F L++ + Y+++MY L
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340
Query: 118 --------------VIDF------YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++ F Y + G AF +E+ R+L P TY++++ G
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPTVITYNTLIHG 399
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHF----LSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+ + + R+ M ++ L P F L + + +S M + + EM+ K
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS-MARGFFNEMLSKGLKP 458
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
++ G M K A + + G Y FV+ LC++ EE
Sbjct: 459 DRFAYNTRIVGEM-----KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
C LL ++V G IP + + + G ++ E+ + +L KG+ + L+
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH 573
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ + + +D A K+ + +V TY+ +++GL RM+EA + FD M+E ++
Sbjct: 574 AHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILP 633
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ S+ I+++ C++ +A++ + EML +PD T+
Sbjct: 634 NKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTH 673
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 193/447 (43%), Gaps = 46/447 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
VY MM +G P V N +LD+ ++ + A L M G PN T++++ L
Sbjct: 201 NVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260
Query: 93 CRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ G+ E GL L+SG+ S+ YN +I+ + +KG F AFD + EM N R P
Sbjct: 261 SKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-PT 319
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-------------------KHFLSGN 188
STY++++ G ++ + M++ K P + FL +
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379
Query: 189 DYVIQKLSDMGKTY--------------AAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ + L TY AA + K D+ + T ++ K G
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC---GLLRDVVERGYIPCAM 291
V A ++ + +G+ D +A+ + E + + + +++ G+ P +
Sbjct: 440 YVSMARGFFNEMLSKGL---KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ FV + C +G ++E +LL ++ GL+ D +S++ + N + KA + ++
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
+ V TY VL+ ++ A F M E V ++ ++ +++ LC + +
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRM 616
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVIS 437
+A K DEM + G P++ +Y +I+
Sbjct: 617 DEAYKYFDEMEEKGILPNKFSYTILIN 643
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 178/417 (42%), Gaps = 17/417 (4%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V+ M G +P V CN +L L +N + A +YG M + G+ P T++ +
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 92 LCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLT 145
C+ G+ + L LL + G Y + V YN++++ SKKG+ A + EM N G N++
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 146 PGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TY+ +++G ++ E D +V MV ++ P LS + ++ L +
Sbjct: 285 A--YTYNPLINGFCQKGLFVEAFD-LVEEMVNRRAFPT--LSTYNTLMYGLCKWVQVTGV 339
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ F K + +L + G + EA ++ + R + Y ++
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHG 399
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + L +++ ++G P + V G + +L KGL D
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRI 382
F ++ + + D ++A ++ E L DV TY+V + L + G EEA +
Sbjct: 460 RFAYNTRI--VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ M ++ ++ +++ LRKA + +EML G P TY +I
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 129/344 (37%), Gaps = 8/344 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G + ++ ++ VP V N L+ L + A L M G+ P+
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPD 424
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLN 136
FT++++ + G + G + + + YN I K D AF
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM P TY+ + + E + ++ MV L+P H + +I
Sbjct: 485 EML-AAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS--IINGFV 541
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A +F + + T ++ A + + + A + + E+ +
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVI 601
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A +N LC + +E ++ E+G +P + + C G W+E L +
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
LD+ + DSF S ++ + Q+ + I+ ++ +++V
Sbjct: 662 LDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINV 705
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 177/406 (43%), Gaps = 16/406 (3%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
F V+ CN LL++L E R A + M + N T++ + + G+F+ L
Sbjct: 151 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKKGRFKAAL 209
Query: 103 GLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+L+ S+ YN++ID + AF L M +LTP TY+++++G
Sbjct: 210 CVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRM-RKDDLTPDECTYNTLING 268
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
K + + M+ + L+P + + Y + D + +EM
Sbjct: 269 FFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPS 328
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
++ T +L K + A+ + + RGIT+ + ++ C+ + +
Sbjct: 329 EL-----TYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKA 383
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+L+ ++E G P + S + C K E +E+LS + G+L + ++L+ Y
Sbjct: 384 KQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICY 443
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VS 393
YC + A+ + I + + ++ LL +++G + EA YM + + +
Sbjct: 444 YCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFN 503
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S SF ++ CH ++ +A +D+M++ GH P+ TY+ ++ G
Sbjct: 504 SVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGL 549
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 171/379 (45%), Gaps = 11/379 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV- 74
+++L + KG + L + +MM G VP A LL+ L + +++ AS ++ ++
Sbjct: 613 TILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIIC 672
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
++G+ + ++ + + G + ++ S +Y +S YN+++ Y K+G F
Sbjct: 673 KEGLYADCIAYNSLMNGYLKGGNVNTIKRMM-SDMYQNEVYPNSASYNILMHGYVKRGQF 731
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+ M + + P TY ++ G +++ + + MV + + P +
Sbjct: 732 SKSLYLYKYMVR-KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVF-- 788
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I S+ K + A +F + T M+ L ++ + ++ ++ H + +
Sbjct: 789 DILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQ 848
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ + Y A VN C+ + + L ++ G +P + S + C GK +E
Sbjct: 849 VGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEE 908
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ S ++ G++ ++LM C +I A+ L +E + +DV +Y+VL+
Sbjct: 909 AVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLIT 968
Query: 369 GLFKDGRMEEAVRIFDYMK 387
GL KD + +A+ ++ MK
Sbjct: 969 GLCKDKHISDALDLYGEMK 987
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 169/414 (40%), Gaps = 10/414 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ M VP+V+ ++D R I A + M GV P++ T+S + C
Sbjct: 281 VFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYC 340
Query: 94 RSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ L L+ GI + M ++ID + + G+ A L M + P
Sbjct: 341 KVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLED-GIDPDV 399
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TYS++++G R K + I+ M + +LP L +I G A F
Sbjct: 400 VTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT--LICYYCKAGYVKVALKHF 457
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ +L+A +EG + EA +S I+ + ++ C
Sbjct: 458 VDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHR 517
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ E + D+V G+ P + C G + ++ + +LD +D
Sbjct: 518 GKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTF 577
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
++L+ C +D+A+ + K+ K D+ TY +LL G + G++ A+ + M E
Sbjct: 578 NALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLE 637
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML-KMGHKPDEATYKQVISGFM 440
VV + ++ +++ L + +++ A E++ K G D Y +++G++
Sbjct: 638 KGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYL 691
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 189/443 (42%), Gaps = 34/443 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +L+ Y + L++ ++ G + C L+D + EI A + +M+
Sbjct: 333 SALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLE 392
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
DG+ P+ T+S + +CR K E++ + SGI + V+Y +I +Y K G
Sbjct: 393 DGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKV 452
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE----KKLLPKHFLS 186
A ++ R L ++++L R G++ E ++ + + +S
Sbjct: 453 ALKHFVDIYR-RGLVANPVIHNALLRAFYRE----------GMITEAEHFRQYMSRMNIS 501
Query: 187 GN----DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC----MLKALSKEGRVKE 238
N + +I GK A ++ D+ + C +L+ L + G + +
Sbjct: 502 FNSVSFNCIIDSYCHRGKIVEAFSVY----DDMVRYGHSPNVCTYQNLLRGLCQGGHLVQ 557
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A Q + + V + + A + +CK +E + +V+ +P + ++
Sbjct: 558 AKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLS 617
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-S 357
C KGK +L +L+KG++ D+ + L+ + Q+ A + +I +G
Sbjct: 618 GFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLY 677
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKN 416
D Y+ L++G K G + R+ M + +V +S+S+ I++ + K++
Sbjct: 678 ADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 737
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
+ M++ G +PD TY+ +I G
Sbjct: 738 YKYMVRKGIRPDNVTYRLLILGL 760
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/499 (18%), Positives = 195/499 (39%), Gaps = 80/499 (16%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ---------- 60
S + + ++D Y H+G ++ VY M YG P V LL L +
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562
Query: 61 ---------------NEIRLASCLYGA----------MVRDGVSPNKFTWSLVAQILCRS 95
N + L C YG MV++ P+ T++++ CR
Sbjct: 563 FCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRK 622
Query: 96 GKFEVVLGLLD----------------------------------------SGIYSS-VM 114
GK L +L G+Y+ +
Sbjct: 623 GKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIA 682
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN +++ Y K G+ +++M + P ++Y+ ++ G + + S + M
Sbjct: 683 YNSLMNGYLKGGNVNTIKRMMSDMYQNE-VYPNSASYNILMHGYVKRGQFSKSLYLYKYM 741
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
V K + P + +I LS+ G A ++ E I ++ + S++
Sbjct: 742 VRKGIRPDNVTY--RLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKS 799
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
++ A+++++ + ++ + A +N L +++ ++ +L ++++ G P
Sbjct: 800 KMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYI 859
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
V ++C G+ L + G++ SS++ C ++++A+ + + +
Sbjct: 860 ALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRS 919
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKA 413
VAT+ L+ L K+ ++ +A+ + M+ ++ V S+ ++++ LC K + A
Sbjct: 920 GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDA 979
Query: 414 MKNHDEMLKMGHKPDEATY 432
+ + EM G P+ TY
Sbjct: 980 LDLYGEMKSKGLWPNVTTY 998
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/500 (18%), Positives = 196/500 (39%), Gaps = 80/500 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G ++ + M G P V +AL++ + R ++ + M +
Sbjct: 368 TILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQK 427
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL---------GLLDSGI----------------- 109
G+ PN ++ + C++G +V L GL+ + +
Sbjct: 428 SGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITE 487
Query: 110 --------------YSSVMYNLVIDFYSKKGDFGAAFDRLNEM---------CNGRNLTP 146
++SV +N +ID Y +G AF ++M C +NL
Sbjct: 488 AEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLR 547
Query: 147 GF-------------------------STYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G T++++L G +Y + + I MV+ LP
Sbjct: 548 GLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLP 607
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ ++ GK A ++ + ++ + C+L L EG+VK A
Sbjct: 608 D--IHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASY 665
Query: 242 IYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ +I + G+ Y + +N K + ++ D+ + P + + +
Sbjct: 666 VFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGY 725
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-D 359
+G++ + L ++ KG+ D+ L+ ID A+ K+ L+G D
Sbjct: 726 VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV-LEGIFPD 784
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
+D+L+ + +M A+R+F+ MK L + SS +F +++ L L ++ +
Sbjct: 785 KLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLH 844
Query: 419 EMLKMGHKPDEATYKQVISG 438
EML++G +P+ Y +++
Sbjct: 845 EMLQVGLQPNHTHYIALVNA 864
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 128/316 (40%), Gaps = 39/316 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P ++ N L+ ++ + + LY MVR G+ P+ T+ L+ L G ++ +
Sbjct: 713 PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 772
Query: 105 LDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ GI+ ++++++I +S+K A N M +L+P T+S++++G
Sbjct: 773 LEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCM-KCLHLSPSSKTFSAMINGLI 831
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKH--FLS------------------------------- 186
R + S ++ M++ L P H +++
Sbjct: 832 RKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEV 891
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I+ L GK A ++F + T ++ +L KE ++ +A+ + L+
Sbjct: 892 AESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLM 951
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ V Y + LCK+ + L ++ +G P + G+
Sbjct: 952 ELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRM 1011
Query: 307 KEVEELLSAVLDKGLL 322
+ EELL + ++GL+
Sbjct: 1012 QNGEELLEDIEERGLI 1027
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 35/249 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++KA KE +V +A + + G + + L +E + + V LR+ + R
Sbjct: 91 LIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARK 150
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAV------------------LDKGLLLDSFC 327
+ + + S C G++++ E++L + + KG + C
Sbjct: 151 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALC 210
Query: 328 CSSLME-------YYCSNRQIDK---------AIALHIKIEKLKGSLDVATYDVLLDGLF 371
ME Y N IDK A L ++ K + D TY+ L++G F
Sbjct: 211 VLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFF 270
Query: 372 KDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+G++ A +F++M ++ V S +++ ++ C + + KA+ EM G P E
Sbjct: 271 GEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSEL 330
Query: 431 TYKQVISGF 439
TY +++G+
Sbjct: 331 TYSALLNGY 339
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 199/473 (42%), Gaps = 69/473 (14%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M + G P N L+ AL + + A L+ M G PN+FT+ ++ + C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 94 RSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
++G + L LL++ G+ + V+YN ++ + ++G + +++ E L P
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS-EKMVEKMREEGLVPDI 252
Query: 149 STYSS----------ILDGARRYEKTEVSDRI-------------------VGLMVEKKL 179
T++S +LD +R + E+ + + VGL+ + K
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 180 LPKHFLSGNDYV--------IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
L + +D +Q L GK AE + K+ D+ I + ++ L
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K G + +A I L+ G+ Y ++ C + + LL++++ +P A
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + S G+ E EELL + +KG LD+ C+ +++ C + ++DKAI + +K
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI-VKG 491
Query: 352 EKLKGSL------------------------DVATYDVLLDGLFKDGRMEEAVRIF-DYM 386
++ GS D+ TY LL+GL K GR EA +F + M
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E S ++ I + C ++ A + +M K G TY +I G
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 197/456 (43%), Gaps = 38/456 (8%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD- 76
++ + +G D ++ MR G VP + N+ + AL ++ ++ AS ++ M D
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 77 --GVS-PNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDF 128
G+ PN T++L+ + C+ G E L +S + S YN+ + + G F
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L +M + + + P +Y+ ++DG + + IVGLM + P G
Sbjct: 343 IEAETVLKQMTD-KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG- 400
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ +GK AA+ + + TC +L +L K GR+ EA ++ ++E
Sbjct: 401 -CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVC----------------------GLLRD-VVERG 285
+G + V+ LC + ++ GL+ D ++E
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+P + S + C G++ E + L + ++ + L DS + + ++C +I A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSR 403
+ +EK + TY+ L+ GL ++ E + D MKE K +S + ++ +
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE-KGISPNICTYNTAIQY 638
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC +++ A DEM++ P+ ++K +I F
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 169/418 (40%), Gaps = 63/418 (15%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----E 99
+P CN LL +L++ I A L M G + T +++ LC SG+ E
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 100 VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+V G+ G S+ + NL + G D L E N P TYS++L+G
Sbjct: 488 IVKGMRVHG--SAALGNLGNSY------IGLVDDSLIE----NNCLPDLITYSTLLNGLC 535
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK----RACDEK 215
+ + + + M+ +KL P + I GK +A + K + C +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSV--AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+E T ++ L + ++ E + + E+GI+ Y + LC+ + E+
Sbjct: 594 LE----TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 276 GLLRDVVERGYIP-------------------CAMELSRFVASQCGK------------- 303
LL +++++ P A E+ S CG+
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL 709
Query: 304 --GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA-LHIKIEKLKGSLDV 360
G+ + ELL AVLD+G L +F L+E C +++ A LH I++ G D
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG-FDP 768
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNH 417
A ++DGL K G +EA D M E+ V ++ V +R H K+ K N+
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNGGNN 826
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 178/443 (40%), Gaps = 33/443 (7%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F++ V + M G P++ + N L+D L + + A + G M R+GV P+ T+
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 86 SLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM-- 138
+ C GK + LL ++ + ++ N+++ K G A + L +M
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 139 ---------CN----GRNLTPGFSTYSSILDGARRYEKT---EVSDRIVGL----MVEKK 178
CN G + I+ G R + + + +GL ++E
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
LP L ++ L G+ A+ +F EK++ + K+G++
Sbjct: 520 CLPD--LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++ + ++G Y + + L ++Q E+ GL+ ++ E+G P + +
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C K ++ LL ++ K + + F L+E +C D A + + G
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMKN 416
+ Y ++ + L G++ +A + + + + + +F+ +V LC EL A
Sbjct: 698 E-GLYSLMFNELLAAGQLLKATELLEAVLD-RGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
+M+ G+ D A VI G
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGL 778
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 160/365 (43%), Gaps = 16/365 (4%)
Query: 88 VAQILCRSGKFEVVLGL----LDSGIYSSVMYNL--VIDFYSKKGDFGAAFDRLNEMCNG 141
+A+IL R+ E + L L S I + + +L V+ ++K AF + ++
Sbjct: 45 IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF-QLVRS 103
Query: 142 R--NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
R P Y+ +L+ + + E + MV + P+ + + +I+ L D
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTF--NLLIRALCDSS 161
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA +F ++ + + T G +++ K G + +++ + + G+ Y
Sbjct: 162 CVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYN 221
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV-LD 318
V+ C+E + ++ ++ + E G +P + + +++ C +GK + + S + LD
Sbjct: 222 TIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 319 KGLLL---DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ L L +S + +++ +C ++ A L I + + +Y++ L GL + G+
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
EA + M + + S S+ I++ LC L L A M + G PD TY
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 435 VISGF 439
++ G+
Sbjct: 402 LLHGY 406
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 7/132 (5%)
Query: 7 GRDSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
G Q D A ++ + + +G V + M G ++ N+L+ L +N+I
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VI 119
L M G+SPN T++ Q LC K E LLD + ++ N+ +I
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 120 DFYSKKGDFGAA 131
+ + K DF A
Sbjct: 672 EAFCKVPDFDMA 683
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 188/413 (45%), Gaps = 10/413 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L++ M + G VP N ++ L + + I A+ + M+ G +P+ T+ +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
LC+ G+ + L V++N +I + G A L++M + P
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ G + ++ ++ M K P + ++ +GK A +
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY--SYTILVDGFCKLGKIDEAYNVL 447
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ ++ C++ A KE R+ EA++I+ + +G + + ++ LC+
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ + LLRD++ G + + + + + +G+ KE +L++ ++ +G LD
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+SL++ C ++DKA +L K+ + + + ++L++GL + G +EEAV ++ KE
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV---EFQKE 624
Query: 389 LKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ + S+ +F +++ LC + + ++ G PD T+ ++S
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 181/410 (44%), Gaps = 14/410 (3%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY P + N +L+ L N ++A+ ++ M+ + P FT+ +V + C
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + L LL + +SV+Y +I SK A L EM P T+
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF-LMGCVPDAETF 290
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+ ++ G ++++ + ++V M+ + P G Y++ L +G+ AA+ +F R
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG--YLMNGLCKIGRVDAAKDLFYRI 348
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQ 270
+I + + ++ GR+ +A + +++ GI Y + + KE
Sbjct: 349 PKPEIVIFN----TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+L D+ +G P + V C GK E +L+ + GL ++ +
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
L+ +C +I +A+ + ++ + DV T++ L+ GL + ++ A+ + D + E
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++ ++ +++ E+++A K +EM+ G DE TY +I G
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/353 (18%), Positives = 141/353 (39%), Gaps = 43/353 (12%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M+ YG VP V N+L+ +++ + LA + M G PN ++++++ C+ G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K + +L D ++V +N +I + K+ A + EM + P T+
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-KGCKPDVYTF 497
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+S++ G L ++ + A + +
Sbjct: 498 NSLISG-------------------------------------LCEVDEIKHALWLLRDM 520
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
E + T ++ A + G +KEA ++ + + +G + + Y + + LC+ +
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ L ++ G+ P + + + C G +E E ++ +G D +SL
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ C +I+ + + K++ D T++ L+ L K G + +A + D
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 154/352 (43%), Gaps = 13/352 (3%)
Query: 95 SGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+G+F+ + LL D GI + ++ ++ Y K G G + EM N + P F
Sbjct: 124 NGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFK 183
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+Y+ +L+ +V+ + M+ +K+ P F G V++ + + +A + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG--VVMKAFCAVNEIDSALSLLR 241
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++ +LSK RV EA+Q+ + G + + LCK
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E ++ ++ RG+ P + + C G+ ++L + +++ +
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FN 357
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+L+ + ++ ++D A A+ + G + DV TY+ L+ G +K+G + A+ + M+
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ I+V C L ++ +A +EM G KP+ + +IS F
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 45/291 (15%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + + ++ + + + +E++R M G P V N+L+ L +EI
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
+ A L M+ +GV N +V YN +I+ +
Sbjct: 511 KHALWLLRDMISEGVVAN------------------------------TVTYNTLINAFL 540
Query: 124 KKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
++G+ A +NEM G L TY+S++ G R + + + + M+ P
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDE--ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 183 HFLSGNDYVIQKLSDMGKT-----YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+ +S N +I L G + EM+ + + + + T ++ L + GR++
Sbjct: 599 N-ISCN-ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV-----TFNSLINGLCRAGRIE 651
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + ++ + GI + ++ LCK + C LL + +E G++P
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL-- 278
D ++ L G K ++ + + GI ++S + + + K P + L+
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 279 -RDV--VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
R+V E + + L V+ C K ++LS + L F +M+ +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL----FTFGVVMKAF 227
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-S 394
C+ +ID A++L + K + Y L+ L K R+ EA+++ + M + V +
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F V+ LC + +A K + ML G PD+ TY +++G
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 51/111 (45%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + +++++ G+ + +E + M + G P + N+L++ L R I
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN 116
++ + +G+ P+ T++ + LC+ G LLD GI + N
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 183/426 (42%), Gaps = 46/426 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +L++ GL + +E++R M V VP L+D L + + I A L M
Sbjct: 183 SFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEM 242
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDF 128
+G P+ T++++ LC+ G F V L+D+ + + V YN +I KG
Sbjct: 243 QIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 302
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+ M + + P TY +I++G + + R++ LM E+ + N
Sbjct: 303 DKALSLLDRMVSSK-CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYI------VN 355
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+YV L + L KEG+ +EA++++ +
Sbjct: 356 EYVYSVL-------------------------------VSGLFKEGKSEEAMRLFKESMD 384
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G + Y A V+ LC++ +P+E +L ++ ++G P A S + G +
Sbjct: 385 KGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHK 444
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+ + + C S L+ C + ++ +A+ + K+ DV Y ++
Sbjct: 445 AIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQ 504
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS---SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
GL G +EEA+++++ M L+ S ++ I+ + LC + +A+ + ML G
Sbjct: 505 GLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGC 564
Query: 426 KPDEAT 431
PD T
Sbjct: 565 DPDLVT 570
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 204/457 (44%), Gaps = 37/457 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEV-YRMMRVYGFVPAVSACNALLDALYRQNEIR 64
E R + ++ Y L +E+ YRM + P V + N++L+ + +
Sbjct: 101 ENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHD 160
Query: 65 LASCLYGAMV--RD-GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI------------ 109
A Y +V +D + PN +++L+ + +C+ LGL+D+ I
Sbjct: 161 RALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK-------LGLVDNAIELFREMPVRKCV 213
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSD 168
+ Y ++D K A L+EM P +T++ +++G ++ + T V+
Sbjct: 214 PDAYTYCTLMDGLCKVDRIDEAVSLLDEM-QIEGCFPSPATFNVLINGLCKKGDFTRVT- 271
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
++V M K +P + +I L GK A + R K + T G ++
Sbjct: 272 KLVDNMFLKGCVPNEVTY--NTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIIN 329
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K+GR + ++ L+ ERG V + Y V+ L KE + EE L ++ +++G
Sbjct: 330 GLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKL 389
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ S V C K E ++LS + DKG ++F SSLM+ + KAI +
Sbjct: 390 NTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVW 449
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL----KVVSSSSFVIVVSRL 404
+ K+ + + Y VL+ GL KDG++ EA+ ++ M VV+ SS ++ L
Sbjct: 450 KDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSS---MIQGL 506
Query: 405 CHLKELRKAMKNHDEM--LKMGHKPDEATYKQVISGF 439
C + +A+K ++EM L+ +PD TY + +
Sbjct: 507 CDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNAL 543
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 183/411 (44%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L +Y ++ ++ + LL +L A L+ + R + + T++++ +
Sbjct: 70 LSLYSRLKSLSLPIPTASLHPLLSSLPPAP----AFVLFADIFRLRLPLSTTTFNIMLRH 125
Query: 92 LCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LC +GK L LL ++V YN VI + +G A + + EM + P T
Sbjct: 126 LCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYT 185
Query: 151 YSSILDGARRYEKTEVSDRIVG-LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
Y++++ G + K E + ++ ++ E K+ P + + +I D G A
Sbjct: 186 YATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMY--NALIGGYCDQGNLEVALRYRG 243
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
D + + T + L EGR EA + + E+G+ Y +N CKE
Sbjct: 244 EMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEG 303
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ + +V +G + + + + KG +E + L + + +G+ D F +
Sbjct: 304 KEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYN 363
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ +C+ +D+A + ++EK + + D TY+ L+ GL GR++EA + + M +
Sbjct: 364 ALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKR 423
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ ++S +++ A+K DEM+ G P TY +I G
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGL 474
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 151/372 (40%), Gaps = 45/372 (12%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++P+K+T++ V C+ GK E + D + ++VMYN +I Y +G+
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A EM + R ++ +TY+ + + + +V M EK L P F
Sbjct: 236 EVALRYRGEMVD-RGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTY-- 292
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I GK A +F+ + I T ++ ALS +G V+E ++++
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFN---- 348
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
D V RG P + + S C G
Sbjct: 349 -------------------------------DAVRRGIRPDLFMYNALINSHCTGGDMDR 377
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E++ + K + D ++LM C ++D+A L ++ K D+ +Y+ L+
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G G +++AV++ D M + ++ ++ LC + A EM+ G P
Sbjct: 438 GYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497
Query: 428 DEATYKQVISGF 439
D++TY +I G
Sbjct: 498 DDSTYISLIEGL 509
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 136/324 (41%), Gaps = 9/324 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ V+ + G D +V+ M G V P NAL+ Q + +A G MV
Sbjct: 187 ATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMV 246
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFG 129
GVS T++L L G+ L++ G+ + YN++I+ Y K+G
Sbjct: 247 DRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEK 306
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A ++ E+ G+ + TY+S++ + +DR+ V + + P F+ +
Sbjct: 307 KAM-KMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMY--N 363
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A I ++I D T +++ L GR+ EA + +++R
Sbjct: 364 ALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKR 423
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GI Y ++ + ++ + +++ +G+ P + + + C G+ +
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDA 483
Query: 310 EELLSAVLDKGLLLDSFCCSSLME 333
E+L+ ++ G+ D SL+E
Sbjct: 484 EDLVKEMVGNGITPDDSTYISLIE 507
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 49/268 (18%)
Query: 46 AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK-------F 98
V+ N + L+ + A L M G++P+ FT++++ C+ GK F
Sbjct: 253 TVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMF 312
Query: 99 EVVLGLLDSGIYSSV------------------------------------MYNLVIDFY 122
EV++G GI ++V MYN +I+ +
Sbjct: 313 EVMVG---KGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSH 369
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
GD AF+ + EM R +TP TY++++ G + + + ++ M ++ + P
Sbjct: 370 CTGGDMDRAFEIMGEMEKKR-ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
L + +I S G A + + T M+K L G+ +A +
Sbjct: 429 --LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDL 486
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ GIT DS Y + + L E +
Sbjct: 487 VKEMVGNGITPDDSTYISLIEGLTTEDE 514
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 190/429 (44%), Gaps = 9/429 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++CY H G ++ + G+ P N L++ + +++ A + +
Sbjct: 96 TFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHV 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
+ G ++ ++ + LC+ G+ L +L + + ++ VMYN++I+ K
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAV 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM R ++P T++S++ G + + + + MV K + P +
Sbjct: 216 SDAYQLYSEMITKR-ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFS- 273
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L G A+ + + + T ++ V +A ++ +S
Sbjct: 274 -ILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSR 332
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y +N L K +E L +++ +G P + + + C G+
Sbjct: 333 LGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISY 392
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L+ + + G+ D +SL++ C N IDKAIAL KI+ + TY++L+D
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID 452
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR++ A +F D + + V++ ++ I+++ LC +A +M G P
Sbjct: 453 GLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIP 512
Query: 428 DEATYKQVI 436
D TY+ +I
Sbjct: 513 DAVTYETII 521
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 150/341 (43%), Gaps = 8/341 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N ++++L + + A LY M+ +SP+ T++ + C G+ + GL +
Sbjct: 203 NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVL 262
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
++ +++++D K G+ A + L M + + P TYSS++DG +
Sbjct: 263 KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMK-QGVIPDVVTYSSLMDGYCLVNEVN 321
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ + M + P H S N +I L + A +FK C + I T
Sbjct: 322 KAKHVFSTMSRLGVAP-HAHSYN-IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L K GR+ A Q+ + GI Y + ++VLCK H ++ L++ + ++G
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C G+ K +++ +L KG ++++ + ++ C ++A
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAE 499
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L K+E D TY+ ++ LF+ E+A ++ M
Sbjct: 500 VLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 182/421 (43%), Gaps = 15/421 (3%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ + + + + G P + N L++ E+ A ++ +++ G P T++
Sbjct: 75 YTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNT 134
Query: 88 VAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ +C +GK + L D I V Y +I+ K G+ AA L ++ G+
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI-EGK 193
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ Y+ I++ + + + ++ M+ K++ P + + +I +G+
Sbjct: 194 LVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD--VVTFNSLILGFCVVGQLK 251
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +F + I T ++ AL K+G + A + ++ ++G+ Y + +
Sbjct: 252 EAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD---K 319
+ C ++ + + + G P A + + G GK K V+E LS + K
Sbjct: 312 DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMIN---GLGKIKMVDEALSLFKEMCCK 368
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ D+ +SL++ C +I A L ++ D+ TY+ L+D L K+ +++A
Sbjct: 369 GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA 428
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + +K+ + S ++ I++ LC L+ A ++L G+ + TY +I+G
Sbjct: 429 IALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING 488
Query: 439 F 439
Sbjct: 489 L 489
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 150/365 (41%), Gaps = 45/365 (12%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M++ EG+ +D + +++++ D ++Y M P V N+L+
Sbjct: 186 MLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFC 245
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSG 108
+++ A L+ MV ++P+ +T+S++ LC+ G +L D
Sbjct: 246 VVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVV 305
Query: 109 IYSSVM------------------------------YNLVIDFYSKKGDFGAAFDRLNEM 138
YSS+M YN++I+ K A EM
Sbjct: 306 TYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C + + P TY+S++DG + + + ++V M +P L+ N +I L
Sbjct: 366 C-CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM-HNNGIPADILTYNS-LIDVLCKN 422
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
A + K+ D+ I+ T ++ L K GR+K A ++ + +G +V Y
Sbjct: 423 HHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTY 482
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N LCKE E LL + G IP A+ + + K + ++ E+LL ++
Sbjct: 483 NIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMII 542
Query: 319 KGLLL 323
+GLLL
Sbjct: 543 RGLLL 547
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 337 SNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+N AI+L ++E LKG + + T+++L++ G M A IF + +L ++
Sbjct: 71 NNNHYTTAISLSHQLE-LKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTT 129
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F +++ +C +L++A+ HD ++ +G D+ +Y+ +I+G
Sbjct: 130 ITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 160/396 (40%), Gaps = 66/396 (16%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P+ S+ NALL L + LA + + +R VSP+ +T++ V LCR G+
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR----- 208
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
K GD L P +TY+S++DG
Sbjct: 209 -------------------KAGDVAKDI-------KAWGLAPSVATYNSLIDG------- 235
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
K G Y +M+ K + I T G
Sbjct: 236 ---------------------------YCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ K A++++ + ++GI Y + ++ LC E + EE L+ ++ +
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + C KG + + + + ++ + D + L++ Y +++ A
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDA 388
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+A+ + K S +V TY+ L+ G + G A + D MKE + + ++ +++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC E+RKA+K DEM ++G +P+ TY +I GF
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 155/363 (42%), Gaps = 48/363 (13%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQ---NEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+V + ++ +G P+V+ N+L+D ++ + L MV G+SP T+ ++
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 90 QILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C++ + + + GI +SV+ YN +I +G + EM L
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM-EDLGL 330
Query: 145 TPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+P T+ +L G ++ + +D I G M E+ + P D VI +
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDG-MTERNVEP-------DVVIYTI-------- 374
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
++ + G++++A+ + ++++GI+ + Y +
Sbjct: 375 ----------------------LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLIT 412
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ GLL ++ E+G + + + + C KG+ ++ +LL + + GL
Sbjct: 413 GFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ +++++ +C I A + ++EK + +V TY+V + + G+M+EA +
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Query: 384 DYM 386
+ M
Sbjct: 533 NEM 535
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 14/300 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P L++ + + A ++ M + G++ + T++ + LC GK E
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 102 LGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L+ D G+ + + + V+ + KKG A D ++ M RN+ P Y+ ++D
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE-RNVEPDVVIYTILID 377
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G RR K E + + M +K + P ++ + +I S G +A + ++ I
Sbjct: 378 GYRRLGKMEDAMAVKEAMAKKGISPN--VTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE---E 273
E T ++ AL +G V++A+++ +SE G+ Y + C + + E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ + +R + + + F+ C GK E +LL+ +LDK L+ + ++ E
Sbjct: 496 IRTRMEKCRKRANV---VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKE 552
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL + KG+ D + M P V L+D R ++ A + AM + G
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAF 132
+SPN T++ + RSG + GLLD GI + V+ YN++I KG+ A
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG 157
L+EM L P TY++I+ G
Sbjct: 460 KLLDEMSE-VGLEPNHLTYNTIIQG 483
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 8 RDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R+ + D + ++++D Y G D + V M G P V+ N L+ R + R
Sbjct: 363 RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID 120
AS L M G+ + T++++ LC G+ + LLD G+ + + YN +I
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482
Query: 121 FYSKKGDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ KG+ +A++ M C R TY+ + + K + ++ ++ M++K
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKR---ANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
L+P +G Y K M K Y ++ R C
Sbjct: 540 LVP----NGITYETIKEGMMEKGYTPDI---RGC 566
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 178/402 (44%), Gaps = 10/402 (2%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P + N + D + + +Y MV G + + ++ LC+ G F+
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 104 LLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
LL + ++ Y+ +I++ K A + + +M R P TY I++
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM--ARYAPPDALTYGPIVERL 124
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ ++ + + V M + + P F+ ++V+ L K A ++F++ ++I
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIY--NFVLSGLCQEEKVEEARLLFEKMVKQRINP 182
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ L K R++ A +++ ++ +G + Y ++ CK+ +
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+V +P + + + GK + E+L ++ KG+ + S L++ +C
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSF 397
R++D+A L ++ + V TY++LL+ L + ++E+A ++F M + + + ++
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LCH K+L A + + EM+ G PD TY + G
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 404
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 166/389 (42%), Gaps = 9/389 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G ++ +++ C G F + ++ MR+ F A + +++ L + N + A
Sbjct: 40 GYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA 99
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDF 121
L M R P+ T+ + + LC++ + + L ++ GI + +YN V+
Sbjct: 100 RELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSG 158
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
++ A +M R + P TY+++++G + + E + + M K +P
Sbjct: 159 LCQEEKVEEARLLFEKMVKQR-INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I AA+ +F + T ++ LSK G+V+ A +
Sbjct: 218 TEV--SYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE 275
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + ++G+T + Y ++ CK + +E LL +V +G P + + + S C
Sbjct: 276 VLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC 335
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K ++ +L + + ++L+ C ++Q+D A L+ ++ D
Sbjct: 336 RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAI 395
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
TYD L GL + G++ EA + + MK K
Sbjct: 396 TYDTLAWGLTRAGKVHEAQELMEKMKLTK 424
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%)
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
R IP A + G+ ++V+E+ +++ G L + L+ C D+
Sbjct: 4 RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR 403
A L + + Y +++ L K R+EEA + + M + ++ +V R
Sbjct: 64 AYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVER 123
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC K + A+ +EM G KPD Y V+SG
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGL 159
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 6/171 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D S G EV M G P V+ + L+D + + A L MV
Sbjct: 258 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 317
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G++P T++++ LCR+ K F++ G+ + +V+ YN ++
Sbjct: 318 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG 377
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
A EM + P TY ++ G R K + ++ M K P
Sbjct: 378 AHRLYAEMI-AKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 190/432 (43%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+L L+ + D L+++ + G P + A + +++ A L M
Sbjct: 149 SLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCM 208
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
R GVSP F +++V LC+ + + L D + + + YN +ID Y K G
Sbjct: 209 KRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQL 268
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ + E N+ P T++S+L+G R + E + R++ M +P F
Sbjct: 269 EEAFN-IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTT 327
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ G A+ + + A + +++ D TC +L AL KEG +++A ++ E
Sbjct: 328 --LFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLE 385
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ + VN C+ + + + G P + + V C +E
Sbjct: 386 NGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEE 445
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+ + +++KG+L + ++L++ Y + D+ + ++EK +V +Y L++
Sbjct: 446 AEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLIN 505
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
L KD + EA I M VV ++ + +++ C +L+ A + DEM+ P
Sbjct: 506 CLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVP 565
Query: 428 DEATYKQVISGF 439
TY +I+G
Sbjct: 566 TLVTYNILINGL 577
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 168/408 (41%), Gaps = 43/408 (10%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V M VYGFVP L D + + + L VR GV +T S++ LC
Sbjct: 309 VLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALC 368
Query: 94 RSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G E V+ L++G+ V +N +++ Y + GD A+ + +M L P
Sbjct: 369 KEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM-EAVGLRPNH 427
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ + E +++ + MVEK +LP ++ + + Y +F
Sbjct: 428 VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPN---------VETYNTLIDGYGRSCLF 478
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
R QI + ++G+ Y +N LCK+
Sbjct: 479 DRC----------------------------FQILEEMEKKGLKPNVISYGCLINCLCKD 510
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
E +L D+V RG +P A + + C GK K+ ++ + ++
Sbjct: 511 ANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTY 570
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ C ++ +A L +I + S DV TY+ L+ G G +++A+ +++ MK+
Sbjct: 571 NILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKK 630
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + + + C + L K + EML+M PD Y +I
Sbjct: 631 SGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALI 678
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 182/434 (41%), Gaps = 18/434 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++L+ +G EV + G P N +++ + +I A M
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
G+ PN T++ + + C E + +++ G+ +V YN +ID Y + F
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
F L EM + L P +Y +++ + ++ I+G MV + ++P N
Sbjct: 481 CFQILEEM-EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVP------NAQ 533
Query: 191 VIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ L D GK A F +I T ++ L K+G+V EA + I
Sbjct: 534 IYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI 593
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ +G++ Y + ++ ++ L + + G P R +A CGK
Sbjct: 594 TRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGL 652
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
VE++ +L L+ D ++L+ Y + + KA +LH +E D TY+ L
Sbjct: 653 VLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCL 712
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ G FK+GRM + + + MK ++ + ++ I++ C LK+ A + EM + G
Sbjct: 713 ILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGF 772
Query: 426 KPDEATYKQVISGF 439
P + +I+G
Sbjct: 773 TPSVSICDNLITGL 786
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 155/356 (43%), Gaps = 35/356 (9%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYG-------AMVRDGVSPNKFTWSLVAQILCR 94
G +P V N L+D R SCL+ M + G+ PN ++ + LC+
Sbjct: 457 GVLPNVETYNTLIDGYGR-------SCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCK 509
Query: 95 SGKF---EVVLG-LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
EV+LG ++ G+ + +YN++ID G AF +EM R + P
Sbjct: 510 DANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV-AREIVPTLV 568
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY+ +++G + K ++ + + +K L ++ N +I S G A +++
Sbjct: 569 TYNILINGLCKKGKVMEAENLAS-EITRKGLSFDVITYNS-LISGYSSAGNVQKALELYE 626
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRV------KEAIQIYHLISERGITVRDSDYYAFVN 263
I+ +T ++ KEG V +E +Q+ +L+ +R I Y A ++
Sbjct: 627 TMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQM-NLVPDRVI------YNALIH 679
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ ++ C L + +G P M + + +G+ +V+ L++ + +GL+
Sbjct: 680 CYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIP 739
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ L+ +C + D A + ++ + + V+ D L+ GL ++GR +A
Sbjct: 740 KTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA 795
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L S+ V E+ ++Y L+ + G+ + F+ L + E+ L ++VE G
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + G K EL++ + G+ F + ++ C +++ A
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
L ++ + + + TY+ L+DG K G++EEA I + MK V + +F +++ L
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGL 297
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C + + +A + +EM G PD TY + G +
Sbjct: 298 CRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 202/476 (42%), Gaps = 48/476 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVS----------------- 48
EG S S++++ +S G LE Y+ M G P+V
Sbjct: 367 EGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEE 426
Query: 49 -----------------ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
CN +L L +Q +I A+ L M G+ PN +++ V
Sbjct: 427 ALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLA 486
Query: 92 LCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
CR + V +L+ G+ ++ Y+++ID K D + +N+M + N+
Sbjct: 487 HCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSS-NIEV 545
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y +I++G + +T + ++ M+E+K +S N +I G+ A
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS-IIDGFIKEGEMDYAVA 604
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
++ C I T ++ L K R+ +A+++ + +G+ + Y A ++ C
Sbjct: 605 AYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFC 664
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K+ E L +++E G P + ++ G +L +L GL D
Sbjct: 665 KKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 724
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L++ + A L+ +++ + D Y V+++GL K G+ + V++F+ M
Sbjct: 725 TYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEM 784
Query: 387 KELKVVSSSSFVIVVSRLC--HLKE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
K+ V + V++ + + H +E L +A + HDEML G PD AT+ ++SG
Sbjct: 785 KKNNVTPN---VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 171/417 (41%), Gaps = 46/417 (11%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+++ M G P + L++ + E+ A Y M G++P+ F + Q
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416
Query: 91 ILCRSGKFEVVLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
+ K E L L D +G+ + + N ++ + K+G A + L +M R + P
Sbjct: 417 GWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKM-ESRGIGP 475
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
+Y++++ R + +++ + M+EK L P N+Y L D
Sbjct: 476 NVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKP------NNYTYSILID--------- 520
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
GC K + +++ + ++ I V Y +N LC
Sbjct: 521 -----------------GCF-----KNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLC 558
Query: 267 KEHQPEEVCGLLRDVVE--RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
K Q + LL +++E R + C M + + +G+ + G+ +
Sbjct: 559 KVGQTSKARELLANMIEEKRFCVSC-MSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPN 617
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF- 383
+SLM+ C N ++D+A+ + +++ LD+ Y L+ G K ME A +F
Sbjct: 618 VITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFS 677
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++E S + ++S +L + A+ + +MLK G + D TY +I G +
Sbjct: 678 ELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 734
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 113/546 (20%), Positives = 203/546 (37%), Gaps = 117/546 (21%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + S A + +L+ YS +++ M G +P V N L AL ++N I A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDF 121
LY MV GV + T L+ + R K L + I S++Y+L +
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI---------LDGARRYEKTEVSDRIVG 172
K + A L EM + P TY+S+ ++ A R++ VSD I
Sbjct: 277 CCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISM 336
Query: 173 LMVEKKLLPKHFLSGNDY------------------------VIQKLSDMGKTYAAEMIF 208
+V L ND +I++ S G+ A +
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFY 396
Query: 209 KR------------------------ACDEKIELQDDT----------CGCMLKALSKEG 234
K+ +E ++L D++ C +L L K+G
Sbjct: 397 KKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQG 456
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
++ +A ++ + RGI Y + C++ + + +++E+G P S
Sbjct: 457 KIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYS 516
Query: 295 -----------------------------------RFVASQCGKGKWKEVEELLSAVLDK 319
+ C G+ + ELL+ ++++
Sbjct: 517 ILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 576
Query: 320 GLLLDSFCCS-----SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
FC S S+++ + ++D A+A + ++ S +V TY L+DGL K+
Sbjct: 577 ----KRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNN 632
Query: 375 RMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
RM++A+ + D MK V + ++ ++ C + A E+L+ G P + Y
Sbjct: 633 RMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYN 692
Query: 434 QVISGF 439
+ISGF
Sbjct: 693 SLISGF 698
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 188/448 (41%), Gaps = 51/448 (11%)
Query: 1 MIQSCEGRDSQSD-ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
MI+ C + + S+++ C+ G G + ++ G+ N LL L
Sbjct: 82 MIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141
Query: 60 QNEI-RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIY 110
+ L M G +P+ +++ + + C + E L LL S
Sbjct: 142 AKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ V Y +VI+ + +G A++ EM + R + P TY++++DG K +V DR
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMD-RGIQPNVVTYTTVIDG---LCKAQVVDR- 256
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
AE +F++ D+ ++ +DT C++
Sbjct: 257 ---------------------------------AEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
G+ KE +++ +S G+ Y + +N LC + E L ++ +G P
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ KG E+ +LL+ +++ GL D + + Y ID+A+ + K
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLK 408
+++ S DV Y L+D L K GR+++AV F+ M + V+ + FV +V LC +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN-EGVAPNIFVFNSLVYGLCTVD 462
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ KA + + EML G +PD + ++
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTIL 490
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 167/401 (41%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + +++ + + ++ A L+ M+ G+ PN T++ V LC++ + G+
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
I V YN +I Y G + L EM + L P TY S+L+
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKPDCYTYGSLLNYLC 319
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + M+ K + P + G +I + G + + +
Sbjct: 320 NNGRCREARFLFDSMIRKGIKPNVAIYG--ILIHGYATKGALSEMHDLLNLMVENGLSPD 377
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ A +K+ + EA+ I++ + ++G++ +Y A ++ LCK + ++
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFN 437
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ G P + V C KW++ +E +L++G+ D ++++ C+
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
Q+ KA L +E++ V +Y L+ G GR++EA + D M + + ++
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C + A EML+ G P TY ++ G
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 149/382 (39%), Gaps = 41/382 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G +D + ++ Y G + + + + M +G P +LL+ L R
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+ +M+R G+ PN +Y ++I Y+ K
Sbjct: 327 ARFLFDSMIRKGIKPN------------------------------VAIYGILIHGYATK 356
Query: 126 GDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G D LN M NG L+P ++ I + + + I M ++ L P
Sbjct: 357 GALSEMHDLLNLMVENG--LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
G +I L +G+ A + F + +E + ++ L + ++A + Y
Sbjct: 415 NYG--ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR--DVVER-GYIPCAMELSRFVASQC 301
+ +GI D F +LC +V R D++ER G P + + + C
Sbjct: 473 EMLNQGIR---PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHC 529
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ E + L +L GL D + ++L+ YC +ID A + ++ + + V
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589
Query: 362 TYDVLLDGLFKDGRMEEAVRIF 383
TY +L GLF R EA ++
Sbjct: 590 TYSTILHGLFTTRRFSEAKELY 611
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T Y + C+ + E +++ G+ + +++ + C + E
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 311 ELLSAVLDK-GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVL 366
++L + + G D ++L++ +C+ ++ ++A+ L + +G +V +Y ++
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
++G F +G++++A +F M + + + ++ V+ LC + + +A +M+ G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 426 KPDEATYKQVISGFM 440
KPD TY +I G++
Sbjct: 270 KPDNDTYNCLIHGYL 284
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 181/438 (41%), Gaps = 49/438 (11%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA----- 66
+A V+ YS G D ++V +M+ G P +S CN + L NE++ A
Sbjct: 281 PEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAE 340
Query: 67 --------------SCLYGA----------------MVRDGVSPNKFTWSLVAQILCRSG 96
+CL M G SP+K ++ V +LCR
Sbjct: 341 RMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDK 400
Query: 97 KFEVVLGLL-----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ + L+ DS + V YN +I SK G A + L E R
Sbjct: 401 RLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLR-FKVDKVE 459
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
YS+I+ + K + + +V M K P + V+ +GK A+ + ++
Sbjct: 460 YSAIVHAYCKEGKIQKAKELVSEMFSKGCDPD--VVTYTSVLDGFCRIGKLDQAKKMMQQ 517
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ T L L + G+ EA ++ ++ E T Y V+ L +E +
Sbjct: 518 MYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGK 577
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E C ++R+++ +G+ P +E++ V S C GK +E +LL ++KG ++ ++
Sbjct: 578 LNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTT 637
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
++ +C ++ A++L + D TY L+D L K R+EEA + MK L+
Sbjct: 638 VIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATEL--TMKMLR 695
Query: 391 ---VVSSSSFVIVVSRLC 405
V S ++ V+ + C
Sbjct: 696 QGLVPSPVTYRSVIHQYC 713
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 115/251 (45%), Gaps = 2/251 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ LS A+ I + +I+L + G ++ + S+ GR+++A+++ L+ + G
Sbjct: 252 MLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAG 311
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ S +++L ++ ++ +V G P + + + C + +
Sbjct: 312 VEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAM 371
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDG 369
EL+ + KG D ++M C ++++++ L K++ L D TY+ L+
Sbjct: 372 ELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQM 431
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K G +EA+ I ++L+ V + +V C +++KA + EM G PD
Sbjct: 432 LSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPD 491
Query: 429 EATYKQVISGF 439
TY V+ GF
Sbjct: 492 VVTYTSVLDGF 502
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 14/298 (4%)
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
S Y +L+ + + + + RI+ LM ++ L P+ F +V+ S G+ A
Sbjct: 247 SVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAF----GFVMVSYSRAGRLRDAMK 302
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +E C + L +K+A++ + GI Y + C
Sbjct: 303 VLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYC 362
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV-LDKGLLLDS 325
HQ ++ L+ + +G P + + C + E+ EL+ + D LL D
Sbjct: 363 NVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDH 422
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+SL++ + D+A+ + + EKL+ +D Y ++ K+G++++A +
Sbjct: 423 VTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSE 482
Query: 386 MK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + VV+ +S V+ C + +L +A K +M K KP+ TY ++G
Sbjct: 483 MFSKGCDPDVVTYTS---VLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGL 537
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 114/305 (37%), Gaps = 46/305 (15%)
Query: 26 GLFMDG--LEVYRMMRVY---GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
GL +G LE +MM + + P + ++ L R+ ++ A + M+ G P
Sbjct: 536 GLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFP 595
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
N +L+ LCR GK LL + G +V+ + VI + +K D AA L
Sbjct: 596 NPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLL 655
Query: 136 NEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK----------- 182
++M CN P TY++++D + ++ E + + M+ + L+P
Sbjct: 656 DDMYLCNKH---PDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQY 712
Query: 183 --------------------HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
F + + VI+KL G A + T
Sbjct: 713 CRKGRVEDLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKT 772
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C ++++ G A ++ + R + L E + EE L+ V
Sbjct: 773 CHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFV 832
Query: 283 ERGYI 287
ERG++
Sbjct: 833 ERGHV 837
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 195/460 (42%), Gaps = 52/460 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD Y +G LE+ M+ G P N L++ L ++ E+ A L M+ G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----------YSSVMYNL---------- 117
++ + +T++ + C+ G F L++ + Y+++MY L
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340
Query: 118 --------------VIDF------YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++ F Y + G AF +E+ R+L P TY++++ G
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPTVITYNTLIHG 399
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHF----LSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+ + + R+ M ++ L P F L + + +S M + + EM+ K
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS-MARGFFNEMLSKGLKP 458
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
++ G M K A + + G Y FV+ LC++ EE
Sbjct: 459 DRFAYNTRIVGEM-----KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
C LL ++V G IP + + + G ++ E+ + +L KG+ + L+
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH 573
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ + + +D A K+ + +V TY+ +++GL RM+EA + FD M+E ++
Sbjct: 574 AHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILP 633
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ S+ I+++ C++ +A++ + EML +PD T+
Sbjct: 634 NKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTH 673
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 193/447 (43%), Gaps = 46/447 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
VY MM +G P V N +LD+ ++ + A L M G PN T++++ L
Sbjct: 201 NVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260
Query: 93 CRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ G+ E GL L+SG+ S+ YN +I+ + +KG F AFD + EM N R P
Sbjct: 261 SKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-PT 319
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-------------------KHFLSGN 188
STY++++ G ++ + M++ K P + FL +
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379
Query: 189 DYVIQKLSDMGKTY--------------AAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ + L TY AA + K D+ + T ++ K G
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC---GLLRDVVERGYIPCAM 291
V A ++ + +G+ D +A+ + E + + + +++ G+ P +
Sbjct: 440 YVSMARGFFNEMLSKGL---KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ FV + C +G ++E +LL ++ GL+ D +S++ + N + KA + ++
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
+ V TY VL+ ++ A F M E V ++ ++ +++ LC + +
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRM 616
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVIS 437
+A K DEM + G P++ +Y +I+
Sbjct: 617 DEAYKYFDEMEEKGILPNKFSYTILIN 643
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 178/417 (42%), Gaps = 17/417 (4%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V+ M G +P V CN +L L +N + A +YG M + G+ P T++ +
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 92 LCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLT 145
C+ G+ + L LL + G Y + V YN++++ SKKG+ A + EM N G N++
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 146 PGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TY+ +++G ++ E D +V MV ++ P LS + ++ L +
Sbjct: 285 A--YTYNPLINGFCQKGLFVEAFD-LVEEMVNRRAFPT--LSTYNTLMYGLCKWVQVTGV 339
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ F K + +L + G + EA ++ + R + Y ++
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHG 399
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + L +++ ++G P + V G + +L KGL D
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRI 382
F ++ + + D ++A ++ E L DV TY+V + L + G EEA +
Sbjct: 460 RFAYNTRI--VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ M ++ ++ +++ LRKA + +EML G P TY +I
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 135/354 (38%), Gaps = 9/354 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G + ++ ++ VP V N L+ L + A L M G+ P+
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPD 424
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLN 136
FT++++ + G + G + + + YN I K D AF
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM P TY+ + + E + ++ MV L+P H + +I
Sbjct: 485 EML-AAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS--IINGFV 541
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G A +F + + T ++ A + + + A + + E+ +
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVI 601
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A +N LC + +E ++ E+G +P + + C G W+E L +
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LD+ + DSF S ++ + Q+ + I+ ++ +++V ++L+ GL
Sbjct: 662 LDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRI-EMLIGGL 714
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 186/413 (45%), Gaps = 19/413 (4%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ +P + + N +++ L ++ + A L M PN FT+ ++ LC+ G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 98 FEVVLGLLDS----GI-YSSVMYNLVIDFYSKKG--DFGAA-FDRLNEMCNGRNLTPGFS 149
E + LL G+ V+Y+ +I + KG D G A FD + E + ++P
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLE----KGISPNVV 116
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
YS +++G + + ++ M E+ + P + +I L G+ A +F
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTY--TCMIGGLCKDGRARKALDLFD 174
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++ E T ++ L KEG + +A +I+ + E+G + Y + LC
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234
Query: 270 QPEEVCGLLRDVVERG-YI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ +E L ++E G Y+ P + + + C +G+ + E+ ++++G + F
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
C L+ Y + IDKA+ L ++ KL TY V++DG K + A +F MK
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354
Query: 388 ELKVVSSSSF--VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +S + F +++ LC L +A + EM + +PD ++ +I G
Sbjct: 355 -ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 180/432 (41%), Gaps = 46/432 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++ + KG G ++ M G P V + L++ ++ R A+ + M
Sbjct: 84 STLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTE 143
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G+ P+ +T++ + LC+ G+ L L D S+V YN++I+ K+G G
Sbjct: 144 RGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGD 203
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
AF + ++L+ +R E + I+GL
Sbjct: 204 AF----------------KIFETMLEKGKRLEVVSYNTLIMGL----------------- 230
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISE 248
+ GK A +F ++ ++ D T +++ L KEGR+ +A++IY + E
Sbjct: 231 -----CNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG + + K ++ L + V + G +P + S + C
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ L S + GL F ++LM C +++A L ++++ D ++++++D
Sbjct: 346 AKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID 405
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K G + A + + M+++ + + ++ ++RL L ++ +A D M+ G P
Sbjct: 406 GTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITP 465
Query: 428 DEATYKQVISGF 439
D Y +I GF
Sbjct: 466 DNHVYDSLIKGF 477
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 145/344 (42%), Gaps = 14/344 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + +++++ +G D +++ M G V + N L+ L ++
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238
Query: 66 ASCLYGAMVRDG--VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----V 118
A L+ +++ DG V P+ T++ V Q LC+ G+ + + + D+ I NL +
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHIL 298
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I Y K G A + L + + L P +TYS ++DG + + + M
Sbjct: 299 IGEYIKSGIIDKAME-LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357
Query: 179 LLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L P F DY ++ L A +F+ + E + M+ K G +
Sbjct: 358 LSPTLF----DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDI 413
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
A ++ + + + G+T Y +F+N L K Q EE G ++ G P
Sbjct: 414 HSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSL 473
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + +EV LL + D G++LD +S++ + C++ +
Sbjct: 474 IKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAE 517
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 157/387 (40%), Gaps = 16/387 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ + KGL+ + V M G P V ++ L + R A L+ M
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G P+ T++++ LC+ G F++ +L+ G V+ YN +I G
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238
Query: 131 AFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK----KLLPKHFL 185
A + + +G + P T+++++ G + + + + I M+E+ L H L
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHIL 298
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
G +Y+ + D A ++KR + T M+ K + A ++
Sbjct: 299 IG-EYIKSGIID-----KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G++ DY + LCKE E+ L +++ E P + + + G
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ELL+ + GL D++ SS + Q+++A + + D YD
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVV 392
L+ G + +EE + + M ++ V+
Sbjct: 473 LIKGFGLNDEIEEVINLLRQMADMGVI 499
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+L D ++++ C ++++KA+ L +++E + TY +L+DGL K+GR+EEA+
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65
Query: 381 RIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
R+ MK E+ VV S+ ++S C L + DEML+ G P+ Y +I
Sbjct: 66 RLLGEMKRKGLEVDVVVYST---LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122
Query: 437 SGF 439
+GF
Sbjct: 123 NGF 125
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 47/439 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + A +++ L R+ + A + VR G P+ T+++ LC++ + + L
Sbjct: 39 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98
Query: 105 LDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + ++V Y ++D K G A L +M N +P TY+ ++DG
Sbjct: 99 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-SPTLKTYTVVIDGLS 157
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA--------------- 204
+ + E + RI M+ P F+ +I L+ +GK A
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTA--LISGLAKIGKLDEALVYLNQMVENGCARG 215
Query: 205 --------EMIFKRAC---------------DEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
++ ++ C D+ ++L T ++ AL K R +EAI
Sbjct: 216 VEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIA 275
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+SER Y + V+ K + +E L++ VERG+IP A+ + + C
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLC 335
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G+ +E E + ++G D+ ++L++ + + I KA ++ ++ + +
Sbjct: 336 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 395
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEM 420
TY+++LDGL K GR+ EA F M+E V++ ++ ++ C + A++ M
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 421 LKMGHKPDEATYKQVISGF 439
L G +P+ +Y +I G
Sbjct: 456 LDRGCEPNLVSYNIIIRGL 474
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 172/401 (42%), Gaps = 52/401 (12%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI 109
C ALL+ L + ++ A L M SP+ +++V LCR + + +L+ +
Sbjct: 12 CTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAV 68
Query: 110 YSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ V YN+ ID K AF L +M + + P TY++++DG + +
Sbjct: 69 RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM-DEKKCLPTTVTYTALVDGLLKAGRL 127
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + I+ MVEK GN + KTY
Sbjct: 128 DEAMAILEQMVEK---------GNSPTL-------KTYTV-------------------- 151
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE- 283
++ LSK GRV+EA +I+ + G Y A ++ L K + +E L +VE
Sbjct: 152 -VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVEN 210
Query: 284 ---RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
RG P + + + C G ++ LD L L F + L+ C +
Sbjct: 211 GCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDDSLDLTHFTFNPLVAALCKAER 269
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV-RIFDYMKELKVVSSSSFVI 399
++AIA K+ + + + TY L+DG K GR++EA+ ++ + ++ + + ++
Sbjct: 270 TEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTS 329
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ LC L + + + EM G++PD TY +I GFM
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 185/435 (42%), Gaps = 15/435 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D G + + + M G P + ++D L + + A ++ M+
Sbjct: 115 TALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLG 174
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS---------VMYNLVIDFYSKKG 126
+G P+ F ++ + L + GK + L L+ + + V++NLVI G
Sbjct: 175 NGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASG 234
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
+ A +E+ + +LT T++ ++ + E+TE + V M E++ P F
Sbjct: 235 NLEDALAYFDELDDSLDLT--HFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTY 292
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ +G+ A + K A + T ++ L K GRV+E + +H +
Sbjct: 293 TS--LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
RG Y A ++ K + + R +++ G + + + + C G+
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E A+ ++G + S+LM+ +CS + A+ L ++ ++ +Y+++
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCH-LKELRKAMKNHDEMLKMG 424
+ GL + G++ +A F+ + + ++ +F + LC L + ++ + M+ G
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530
Query: 425 HKPDEATYKQVISGF 439
P+ +Y ++ G
Sbjct: 531 TSPNLHSYSILMDGI 545
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 145/354 (40%), Gaps = 49/354 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV------AQILCRS 95
GF+P +++D L + + + M G P+ T++ + A+++ ++
Sbjct: 319 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 378
Query: 96 GKFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+ V +L SG + S+V YN+++D K G A+ M R TYS++
Sbjct: 379 HR--VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM-EERGCVATVVTYSAL 435
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+DG G AA +F+R D
Sbjct: 436 MDG-------------------------------------FCSEGNVSAAVELFRRMLDR 458
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE-HQPEE 273
E + +++ L + G++ +A + + +R + + +F++ LC+ +
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGD 518
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L +V +G P S + C G + E+ ++ +G+ D ++L+
Sbjct: 519 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ C ++D+A+ + ++E+ + + D +Y LLD L + RMEEA + +MK
Sbjct: 579 WLCIAGRVDEALEVFRELER-RSAPDAWSYWSLLDALSRCERMEEARLLSFHMK 631
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
MI ++ D ++ C +L L K G++ A+ L+ E + + +N L
Sbjct: 1 MIDRKLVDTRV------CTALLNGLCKTGQLDRAML---LLDEMPCSPDMVAFTVVINGL 51
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+E + +E +L V G P + + F+ C + + +LL + +K L +
Sbjct: 52 CREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTT 111
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-D 384
++L++ ++D+A+A+ ++ + S + TY V++DGL K GR+EEA RIF D
Sbjct: 112 VTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVD 171
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK----MGHKPDEATYKQVI 436
+ + + ++S L + +L +A+ ++M++ G +PD + VI
Sbjct: 172 MLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVI 227
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 121/277 (43%), Gaps = 17/277 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D G +G E + MR G+ P AL+D + I A +Y M++ G
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
+ T++++ LC++G+ + L + + G ++V+ Y+ ++D + +G+ AA
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSG 187
+ M + R P +Y+ I+ G R K + +++++L P FL G
Sbjct: 450 ELFRRMLD-RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHG 508
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ Q+L +G +F+ + + ++ + + G ++ ++I+H +
Sbjct: 509 ---LCQRLDTVGDGVE---LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMV 562
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
RG+ + + LC + +E + R++ R
Sbjct: 563 SRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 599
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 147/373 (39%), Gaps = 17/373 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-- 108
N L+ AL + A M P FT++ + + G+ + L L
Sbjct: 258 NPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE 317
Query: 109 ---IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
I +V Y +ID K G +R +EM N R P TY++++DG + +
Sbjct: 318 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRN-RGYEPDAVTYAALIDGFMKAKMIP 376
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF----KRACDEKIELQDD 221
+ R+ M++ + + ++ L G+ A F +R C +
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTY--NIILDGLCKAGRVAEAYATFLAMEERGCVATVV---- 430
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ EG V A++++ + +RG Y + LC+ + + +
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490
Query: 282 VERGYIPCAMELSRFVASQCGK-GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++R P + F+ C + + EL +++ +G + S LM+ C
Sbjct: 491 LQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 550
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV 400
++ + + ++ + DV ++ L+ L GR++EA+ +F ++ + S+ +
Sbjct: 551 LEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSL 610
Query: 401 VSRLCHLKELRKA 413
+ L + + +A
Sbjct: 611 LDALSRCERMEEA 623
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 18/266 (6%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M+QS G + +++LD G + + M G V V +AL+D +
Sbjct: 385 MLQS--GTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 442
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVID 120
+ A L+ M+ G PN +++++ + LCR+GK + + L D
Sbjct: 443 GNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE----KLLQRRLCPD 498
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNL---------TPGFSTYSSILDGARRYEKTEVSDRIV 171
Y+ RL+ + +G L +P +YS ++DG R EV+ I
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
MV + + P + +I+ L G+ A +F R + + + +L ALS
Sbjct: 559 HEMVSRGVAPDVVVFNT--LIRWLCIAGRVDEALEVF-RELERRSAPDAWSYWSLLDALS 615
Query: 232 KEGRVKEAIQIYHLISERGITVRDSD 257
+ R++EA + + +G R D
Sbjct: 616 RCERMEEARLLSFHMKLQGCAPRHYD 641
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 14/275 (5%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R + DA++ ++D + + VYR M G V + N +LD L + +
Sbjct: 353 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 412
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSS-VMYNLVID 120
A + AM G T+S + C G + L LD G + V YN++I
Sbjct: 413 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 472
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKL 179
+ G A+ ++ R L P T++S L G +R + + MV +
Sbjct: 473 GLCRAGKLAKAYFYFEKLLQ-RRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGT 531
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P L ++ + G IF + +++ L GRV EA
Sbjct: 532 SPN--LHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 589
Query: 240 IQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEE 273
++++ + R + D+ Y++ ++ L + + EE
Sbjct: 590 LEVFRELERR--SAPDAWSYWSLLDALSRCERMEE 622
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 182/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A N ++D +++ ++ A L+ MV+ G+ P+ T+S V
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM +++
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSIL 323
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P ++++ +Y K + + + M K P F + N Y + L DM
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD- 382
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 383 -----LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G +P + C G + +EL+S +++ G+
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD S++ C ++ A + + D Y++L+DG G+ME+A+R
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557
Query: 382 IFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 189/457 (41%), Gaps = 46/457 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + + V++ MR +P V A N L+ +L + +I+ A ++ M G +P+
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360
Query: 82 KFTWSLVAQILCRSG-------KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFD 133
F+++++ G F+++LG GI + +N++I Y+ G A
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLG---DGIAPVICTFNVLIKAYANCGMLDKAMI 417
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------- 184
NEM + P TY +++ R K + + M+++ ++P +
Sbjct: 418 IFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476
Query: 185 ---------------LSGNDY---------VIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ N +I L +G+ A+ IF + +
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ G++++A++++ + GI Y VN CK + +E L R+
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++++G P + + + G+ + + + G+ ++ S ++ NR
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
D+AI L ++ + +D+ T + ++ G+F+ R+EEA +F + +V + ++ I
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSI 716
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ L + +A M G +PD V+
Sbjct: 717 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 154/383 (40%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 94 ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH 153
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K C++ Q D
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 222 --TC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C ++ KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V +G +P + + G+WKE + + + +L D ++LM
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG----------------------- 369
C +I +A + + + DV +Y ++L+G
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 370 --------LFKD----GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
L K G +++A+ IF+ M++ V +++ V++ LC + ++ AM+
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGF 476
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 182/462 (39%), Gaps = 106/462 (22%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
GL +D + +++ GF A AL L+R E+ G P+ F++
Sbjct: 143 GLRVDAIIASHLLK--GFCEAKRTDEALDILLHRTPEL-------------GCVPDVFSY 187
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSS---VMYNLVIDFYSKKGDFGAAFDRLNEM 138
+++ + LC GK +++ + + G S V YN VID + K+GD A D EM
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 247
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
R + P TYSS++ + + ++ + MV K +LP ++ N +I S
Sbjct: 248 VQ-RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN--LIYGYSST 304
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ A +FK + I ++ +L K G++KEA ++ ++ +G ++ D
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG---QNPDV 361
Query: 259 YAFV----------------------------------NVLCKEHQPEEVCGLL------ 278
+++ NVL K + CG+L
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN---CGMLDKAMII 418
Query: 279 -RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ + G P + +A+ C GK + E + ++D+G++ D + L++ +C+
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+ + KA L +I LD+ +F F
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDI---------------------VF-------------F 504
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC L + A D + +G PD Y ++ G+
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 167/410 (40%), Gaps = 43/410 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY------------------- 110
+ GV P+K+ + + Q C G E++ ++++G+
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 111 -----------------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+V+YN+++D Y G A + M + + P Y +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVGYGT 576
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + + + M++K + P L + +I L + G+T A++ F +
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY--NIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I + T +L+ L K EAI ++ + + + + + + + EE
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + G +PCA+ S + + +G +E E++ S++ + G DS + ++
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 172/409 (42%), Gaps = 52/409 (12%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
Y P V + N ++D +++ E+ A L+ M+ G+ P+ T++ + LC++ +
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDK 253
Query: 101 VLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+ +L D G+ YN++I Y G A L +M +G L P TYS ++
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYSLLI 312
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ + + + MV K P + ++ + G + +
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIY--HILLHGYATKGALIDVRDLLDLMIRDG 370
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I + ++ A +K G V +A+ + + + G+ Y +++LCK + E+
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+V G P + + + C G+WK+VEEL ++++G+ D+ +++M+
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490
Query: 336 CSNRQIDKA-----IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
C ++ +A + +HI ++ DV +Y+ L+DG G+M+E++
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKP-----DVVSYNTLIDGYCFVGKMDESI---------- 535
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K D M+ +G +PD TY +++G+
Sbjct: 536 ------------------------KQLDRMVSIGLRPDSWTYNSLLNGY 560
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 200/435 (45%), Gaps = 23/435 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V+D + +G ++ M G P V N+L+D L + + A + M G
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V P+ T++++ + C G+ E + LL SG+ V+ Y+L+I +Y K G A
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M + P + Y +L G A + +V D ++ LM+ + +H + +
Sbjct: 326 SVFDSMVR-KGQKPNSTIYHILLHGYATKGALIDVRD-LLDLMIRDGIPFEH--RAFNIL 381
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I + G A F + + ++ L K GRV++A+ ++ + G+
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ + + ++ LC + ++V L +++ RG P A+ ++ + + C +G+ E ++
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
V+ G+ D ++L++ YC ++D++I ++ + D TY+ LL+G F
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561
Query: 372 KDGRMEEAVRIFDYM--KELKVVSSSSFVIV-----VSRLCHLKELRKAMKNHDEMLKMG 424
K+GR+E+A+ ++ M K++K + +S +++ R+ +EL M + L++
Sbjct: 562 KNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRI- 620
Query: 425 HKPDEATYKQVISGF 439
TY V+ G
Sbjct: 621 -----ETYNTVLGGL 630
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 174/414 (42%), Gaps = 44/414 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + A ++++ Y+ G + + MR G P V + + ++ L + +
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVMY-NLVID 120
A + MV +G+SPN +++ + LC G++ E+ +++ GI+ ++ N ++D
Sbjct: 429 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 488
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K+G A D +M + P +Y++++DG K + S + + MV L
Sbjct: 489 NLCKEGRVVEAQDFF-DMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLR 547
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ G+ A +++ + ++ T ML L + GR+ A
Sbjct: 548 PDSWTYNS--LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAAR 605
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++Y + +RG +R Y + LC+ +E + D+ + + S + +
Sbjct: 606 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINAL 665
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G+ E + L SA++ +G + D V
Sbjct: 666 LKVGRIDEAKSLFSAMVLRGPVPD-----------------------------------V 690
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKA 413
TY +++ ++G +EE+ +F M++ + S + I+V RL ++R+A
Sbjct: 691 ITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/381 (18%), Positives = 157/381 (41%), Gaps = 33/381 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G+ S ++L Y+ KG +D ++ +M G A N L+ A + +
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 393
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + M ++G+ P+ ++S V ILC++G+ E +Y
Sbjct: 394 AMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVE-------DAVY--------------- 431
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
N+M + L+P +++S++ G + + + + M+ + + P
Sbjct: 432 --------HFNQMVS-EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ L G+ A+ F ++ + ++ G++ E+I+
Sbjct: 483 M--NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G+ Y + +N K + E+ L R++ + CA+ + + G+
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
EL ++D+G L ++++ C N +D+A+ + + + LDV T+ +
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSI 660
Query: 366 LLDGLFKDGRMEEAVRIFDYM 386
+++ L K GR++EA +F M
Sbjct: 661 VINALLKVGRIDEAKSLFSAM 681
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 174/432 (40%), Gaps = 19/432 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ Y G + + + + M G P V + L+ + A ++ +MVR
Sbjct: 274 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVR 333
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGA 130
G PN + ++ G V LLD I + +N++I Y+K G
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 393
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--HFLSGN 188
A EM L P +YS+++ + + E + MV + L P F S
Sbjct: 394 AMTAFTEM-RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS-- 450
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I L +G+ E + + I ++ L KEGRV EA + ++
Sbjct: 451 --LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y ++ C + +E L +V G P + + + G+ ++
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + K + + + ++ +I A L++K+ L + TY+ +L
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628
Query: 369 GLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GL ++ ++EA+R+F+ ++ EL V +F IV++ L + + +A M+ G
Sbjct: 629 GLCENSCVDEALRMFEDLRSKEFELDV---RTFSIVINALLKVGRIDEAKSLFSAMVLRG 685
Query: 425 HKPDEATYKQVI 436
PD TY +I
Sbjct: 686 PVPDVITYSLMI 697
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 179/454 (39%), Gaps = 61/454 (13%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYR-------QNEIRLASCLYGAMVRDGVSPNK 82
D L ++ + +V A N++L + R ++ LA L+ MVR GV+
Sbjct: 32 DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMA 91
Query: 83 FTWSLVAQILCRSGKF-----------------------EVVLGLLDSGIYSSVM----- 114
++ + C G+ +++ GL D M
Sbjct: 92 AIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFR 151
Query: 115 -------------YNLVIDFYSKKGDFGAAFDRLNEMC--NGRNLTPGFSTYSSILDGAR 159
YN +I + A + L M G N +P +Y++++DG
Sbjct: 152 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF- 210
Query: 160 RYEKTEVSDRIVGLMVE--KKLLPKHFLSGNDYV--IQKLSDMGKTYAAEMIFKRACDEK 215
+++ EV D+ L E + LP ++ N + + K M K A I + D+
Sbjct: 211 -FKEGEV-DKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA---ILQHMFDKG 265
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T M++ G+++EA+++ +S G+ Y + CK + E
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ +V +G P + + KG +V +LL ++ G+ + + L+ Y
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 385
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSS 394
+ +DKA+ ++ + DV +Y ++ L K GR+E+AV F+ M E +
Sbjct: 386 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNI 445
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
SF ++ LC + E +K + EM+ G PD
Sbjct: 446 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 479
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 182/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A N ++D +++ ++ A L+ MV+ G+ P+ T++ V
Sbjct: 206 DLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVH 265
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM ++
Sbjct: 266 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSIL 324
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P T S ++ +Y K + + + M K P F + N Y + L DM
Sbjct: 325 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD- 383
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 384 -----LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 438
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G P + + C G + +EL+S +++ G+
Sbjct: 439 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 498
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD SS++ C ++ A + + D Y++L+DG G+ME+A+R
Sbjct: 499 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 558
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 559 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 182/432 (42%), Gaps = 34/432 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G++ + +++L+ Y+ KG +D +++ +M G P N L+ A +
Sbjct: 356 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 415
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A ++ M GV P+ T+ V LCR GK + + + +++
Sbjct: 416 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-----------------EKFNQM 458
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A D+ C L GF T+ S+L + + I +M L F
Sbjct: 459 IDQGVAPDKYAYNC----LIQGFCTHGSLL---------KAKELISEIMNNGMHLDIVFF 505
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I L +G+ A+ IF + + ++ G++++A++++
Sbjct: 506 SS---IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI Y VN CK + +E L R++++RG P + S + G+
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ +D + ++ NR D+AI L ++ + +++ T +
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++DG+F+ R+EEA +F + ++V S ++ I+++ L + +A M G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Query: 425 HKPDEATYKQVI 436
+P+ V+
Sbjct: 743 CEPNSRLLNHVV 754
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 165/371 (44%), Gaps = 46/371 (12%)
Query: 77 GVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG----IYSSVMYNLVIDFYSKKGDFG 129
G P+ F++S++ + LC +SG+ + +L ++ G + V YN VID + K+GD
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A D EM R + P TY+S++ + + ++ + MV K++LP ++ N
Sbjct: 240 KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN- 297
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I S G+ A +FK I T ++ +L K G++KEA ++ ++ +
Sbjct: 298 -LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 356
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G ++ D +++ +++ GY KG ++
Sbjct: 357 G---QNPDVFSY------------------NIMLNGY--------------ATKGCLVDM 381
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D + + L++ Y + +DKA+ + ++ DV TY ++
Sbjct: 382 TDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAA 441
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + G+M++A+ F+ M + V ++ ++ C L KA + E++ G D
Sbjct: 442 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 501
Query: 429 EATYKQVISGF 439
+ +I+
Sbjct: 502 IVFFSSIINNL 512
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 95 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANH 154
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K CD+ Q D
Sbjct: 155 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 214
Query: 222 --TC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C ++ KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 274
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V + +P + + G+WKE + + +L D S LM
Sbjct: 275 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL---------------------DGLF 371
C +I +A + + + DV +Y+++L DG+
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394
Query: 372 KD--------------GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D G +++A+ IF+ M++ V ++ V++ LC + ++ AM+
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGF 477
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/410 (18%), Positives = 167/410 (40%), Gaps = 43/410 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY------------------- 110
+ GV+P+K+ ++ + Q C G E++ ++++G++
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Query: 111 -----------------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+V+YN+++D Y G A + M + + P Y +
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVGYGT 577
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + + + M+++ + P L +I L + G+T A+M F +
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYS--IIIDGLFEAGRTVPAKMKFHEMTE 635
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I + T +L+ L K EAI ++ + + + ++ + + + EE
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + +P + S + + +G +E E++ S++ + G +S + ++
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 756 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/506 (19%), Positives = 213/506 (42%), Gaps = 82/506 (16%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S +++ ++ +G+ L V+ M G VP + +C+ LL L ++ E R+A ++
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKG 126
+V G+ P+ + S+V C+ G+ +V + +L+ + V YN +++ Y +G
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-------------ARRYEKTE---VSDRI 170
DF +R+ + + R ++ T + ++ G R E+ E V +R+
Sbjct: 276 DF-EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERV 334
Query: 171 VGLMVE--------------KKLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKRAC 212
G++V+ + + + L N + +I+ +G+ AE +F
Sbjct: 335 YGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMV 394
Query: 213 DEKIELQDDTCGCMLKALSKEGRVK----------------------------------- 237
D ++ + +L +EG+V
Sbjct: 395 DWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYD 454
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A+ ++HL+ ERG+T + ++ K + L ++++ RG+ + + +
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ C GK E + + + GL D +L + YC N + +A + +E+ S
Sbjct: 515 SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI----VVSRLCHLKELRKA 413
+ Y+ L+DGLFK ++ + + D + E++ S V+ ++S C ++L KA
Sbjct: 575 ASIEMYNSLIDGLFKIRKLND---VTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKA 631
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ EM++ G P+ +++S
Sbjct: 632 FHLYFEMIERGFTPNVVVCSKIVSSL 657
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 196/467 (41%), Gaps = 50/467 (10%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++D Y G D + + M G + CN L+ + ++ A ++ MV
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDW 396
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
+ P+ ++++ + CR GK F + +L GI +V+ YN VI G + A
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDA 456
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--- 188
+ M R +TP + ++LD + K SDR +M+ K++L + F
Sbjct: 457 LHLWHLMVE-RGVTPNEISCCTMLDC---FFKMGDSDR--AMMLWKEILGRGFTKSTVAF 510
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L MGK A +F R + + + T + K G V+EA QI ++
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ ++ Y + ++ L K + +V LL ++ RG P + ++ C + K +
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA------------IALH-------- 348
L ++++G + CS ++ + +I +A +A+H
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLV 690
Query: 349 -----IKIEKLKGSLDVA----------TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
++ +K+ SLD + Y++ +DGL K G+++EA + + +
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750
Query: 394 SSSFVIVVSRLCHLK-ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + C + + +A K DEML+ G P+ Y +I+G
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGL 797
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 166/379 (43%), Gaps = 14/379 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LDC+ G + +++ + GF + A N ++ L + ++ A ++ M G
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537
Query: 78 VSPNKFTWSLVAQILCRSGKFE---VVLGLLDSGIYSSV--MYNLVIDFYSKKGDFGAAF 132
+SP++ T+ ++ C++G + + G+++ S+ MYN +ID K
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVT 597
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D L EM R L+P TY +++ G +K + + + M+E+ P + ++
Sbjct: 598 DLLVEM-QTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSK--IV 654
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L + A +I + D I + C L K EA +I + + I
Sbjct: 655 SSLYRDDRISEATVILDKMLDFDILAVHNKCS---DKLVKNDLTLEAQKIADSLDKSDIC 711
Query: 253 VRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
S+ Y ++ LCK + +E +L ++ RG++P + + G E
Sbjct: 712 NSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEA 771
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L+KGL+ + ++L+ C ID+A L K+ + + TY++L+
Sbjct: 772 FKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGC 831
Query: 370 LFKDGRMEEAVRIFDYMKE 388
+ G +++A R+ + M E
Sbjct: 832 YCRIGDLDKASRLREKMTE 850
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 168/401 (41%), Gaps = 34/401 (8%)
Query: 53 LLDALYRQNEIRLASCL---YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLL 105
L D+L R+ + ++CL + A P+ ++S++ IL + F V+ L+
Sbjct: 69 LTDSLLRRLRLHPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLM 128
Query: 106 D----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
D + + + N V Y + G FD L + R +T + Y + D R
Sbjct: 129 DLHCTNNYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTK-HALY--VFDEMSRI 185
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
R+ GL +++ KL G+ A M+F + I
Sbjct: 186 ------GRVPGL------------RSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVY 227
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
C ++ A + GRV A+++ + + G+ Y VN E V +LR +
Sbjct: 228 MCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM 287
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQ 340
ERG + + + C KGK E E+LL V D+ L++D L++ YC +
Sbjct: 288 SERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGR 347
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
++ A+ + ++ ++ +++ + L+ G K G++ EA R+F M + + S+
Sbjct: 348 MEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNT 407
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ C ++ KA +EML G P TY VI G +
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLV 448
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 190/465 (40%), Gaps = 78/465 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+LVL +G + + + R ++ +G P V + NA+L L L MV
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMV 244
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G PN T+S + LCR+G FE V + +++ + G A
Sbjct: 245 AAGCPPNIVTFSTLIGHLCRNGLFE-----------------RVHEVHAQMAEHGCA--- 284
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN----DY 190
P Y++I+DG + E+ EV+ I+ M P + LS N +
Sbjct: 285 -----------PDVRMYATIIDGVCKEERLEVARGILNRM------PSYGLSPNVVCYNT 327
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ L + AE + D+ L D T ++ L + G V I++ + E G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y +N CKE +E LLR + G P + + + C +W + E
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAE 447
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL+S ++ +G + ++L+ + C +++AI L ++ S D+ +Y ++DGL
Sbjct: 448 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 507
Query: 371 FK-----------------------------------DGRMEEAVRIFDYMKELKVVSSS 395
K +GR+ + +++F+ +++ V S +
Sbjct: 508 GKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA 567
Query: 396 S-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V+S LC E +A++ M+ G P+E+TY +I G
Sbjct: 568 VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 160/395 (40%), Gaps = 49/395 (12%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DS 107
L+ AL + I A + M R G +P + + + CR+ F +G+L
Sbjct: 116 PLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGR 175
Query: 108 GIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEK 163
G V NLV+ +G A L ++ P +Y+++L G ARR+
Sbjct: 176 GCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGH 235
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+Q L + EM+ C I T
Sbjct: 236 ----------------------------VQDLME-------EMV-AAGCPPNIV----TF 255
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ L + G + +++ ++E G Y ++ +CKE + E G+L +
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS 315
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P + + + C +W+E E LL+ + DK LD + L+++ C N +D+
Sbjct: 316 YGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDR 375
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
I + ++ + DV TY +++G K+G ++EAV + M ++ S+ IV+
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
LC + A + +M++ G P+ T+ +I+
Sbjct: 436 GLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLIN 470
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 137/314 (43%), Gaps = 45/314 (14%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++D GL +EV M +G +P V +++ ++ I A L +M
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA 419
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFG 129
G PN ++++V + LC + ++ E++ ++ G + V +N +I+F KKG
Sbjct: 420 ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479
Query: 130 AAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + L +M NG +P +YS+++DG + T+ + ++ +MV+K + P +
Sbjct: 480 QAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTII--- 534
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
Y++ + ALS EGR+ + IQ++ I +
Sbjct: 535 -------------YSS---------------------IASALSGEGRINKVIQMFENIQD 560
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y A ++ LCK + + L +V G +P + + +G KE
Sbjct: 561 TTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKE 620
Query: 309 VEELLSAVLDKGLL 322
+E+L+ + KG L
Sbjct: 621 AQEILTELCSKGAL 634
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
C +L+A+ +G V EA+++ L+ G Y A + LC + V L+ +
Sbjct: 183 NCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEE 242
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+V G P + S + C G ++ V E+ + + + G D +++++ C +
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA----VRIFDYMKELKVVSSSS 396
++ A + ++ S +V Y+ LL GL R EEA +FD L V+
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVT--- 359
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F I+V LC + + ++ ++ML+ G PD TY VI+GF
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 8/186 (4%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y+ V LC + + +L D+ RG P + + C ++ +L +
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLH 173
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRM 376
+G LD C+ +++ C +D+A+ L + G DV +Y+ +L GL R
Sbjct: 174 GRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRW 233
Query: 377 EEAVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ D M+E+ +F ++ LC + + H +M + G PD Y
Sbjct: 234 GH---VQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMY 290
Query: 433 KQVISG 438
+I G
Sbjct: 291 ATIIDG 296
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 185/441 (41%), Gaps = 45/441 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S ++ VL+ GL V+ M V G VP S+ ++ +R +I+
Sbjct: 176 QGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQE 235
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVID 120
A M++ G P+ T +L+ LC +G + ++D G +++ + +ID
Sbjct: 236 ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
KKG AF+ L EM NG P T+++++DG + TE + R+ +V
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNG--WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR--- 350
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
SD TY + T M+ KE ++ A
Sbjct: 351 ----------------SD---TYKPNV--------------HTYTSMIGGYCKEDKLNRA 377
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + E+G+ + Y +N CK L+ + + G++P + + S
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C K + E ELL+ GL D + L++ C I++A+A ++ K D
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
+ ++L+ + +M+E+ R+F + L ++ + ++ ++S C ++ A+K
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M + G PD TY +ISG
Sbjct: 558 NMKRHGCVPDSFTYGSLISGL 578
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 168/433 (38%), Gaps = 57/433 (13%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
MIQ G + +L+L GL + +R M GF P + +L+D L ++
Sbjct: 243 MIQ--RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKK 300
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDS--------- 107
I+ A + MVR+G PN +T + + LC+ G F + L L+ S
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 108 ---------------------------GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMC 139
G++ +V Y +I+ + K G FG A++ +N M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM- 419
Query: 140 NGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
P TY++ +D +R E E+ ++ +E + L IQ+
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL------IQEQ 473
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
A F R E ++ A ++ ++KE+ +++ L+ G+
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + ++ CKE + ++ G +P + ++ C K E +L A
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++D+GL +L YC ++ D A A+ I +E L L + T L+ L + +
Sbjct: 594 MIDRGLSPPEVTRVTLAYEYC--KRNDSANAM-ILLEPLDKKLWIRTVRTLVRKLCSEKK 650
Query: 376 MEEAVRIFDYMKE 388
+ A F + E
Sbjct: 651 VGVAALFFQKLLE 663
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
CML+ S+ GR+ EA+ + + +G+T + + + E + ++ R
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G +P + V GK +E + L+ ++ +G + D+ C+ ++ C N +++A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSR 403
I K+ L ++ + L+DGL K G +++A + + M + + + ++
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 404 LCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGF 439
LC KA + ++++ +KP+ TY +I G+
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 368
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 178/407 (43%), Gaps = 44/407 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G P V + + +++ E++ L M G+ PN +T++ + +LC+SGK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 98 FE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ V+ +++ GI +V+Y +ID + K G+ AA+ +EM R + P F Y+
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR-IVPDFIAYT 119
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++ G L GK A+ +F +
Sbjct: 120 AVICG-------------------------------------LCRCGKMMEADKVFNKMF 142
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+E + T ++ K G +++A +++ + + G+T Y A + LCK Q +
Sbjct: 143 SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVD 202
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL ++ +G + V C G ++ +L+ + G+ D+ ++LM
Sbjct: 203 TANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLM 262
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ YC ++ KA L ++ V T++VL++G G +E+ R+ +M E ++
Sbjct: 263 DAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIM 322
Query: 393 -SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+++++ ++ + C +R + + M G PD TY +I G
Sbjct: 323 PNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKG 369
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 143/328 (43%), Gaps = 4/328 (1%)
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
V Y+ VI+ Y G+ + EM + L P TY+SI+ + K + ++R++
Sbjct: 11 VSYSTVINGYCLGGELQKVLKLIQEM-QMKGLKPNLYTYNSIILLLCKSGKVDDAERVLR 69
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M+ + ++P + +I +G AA +F ++I ++ L +
Sbjct: 70 EMINQGIVPDTVVYTT--LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G++ EA ++++ + RG+ + Y ++ CK + E+ L +V+ G P +
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ C G+ ELL + KGL L+ +SL+ C + I +A+ L ++E
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
D T+ L+D K G M +A + M + + + +F ++++ C L
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ML+ G P+ TY ++ +
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQY 335
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 137/321 (42%), Gaps = 8/321 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++D Y G ++ M G P V AL D L + ++ A
Sbjct: 145 GVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTA 204
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDF 121
+ L M G+ N T++ + LC+SG + L++ +G+Y ++ + ++D
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y K G+ A + L EM + R L P T++ +++G E +R++ M+EK ++P
Sbjct: 265 YCKTGEMVKAHELLREMLD-RGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMP 323
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + ++++ I+K C + +T ++K K +KEA
Sbjct: 324 NT--TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWF 381
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ ++E+G + S Y + + K+ + E L ++ G A + FV
Sbjct: 382 LHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISY 441
Query: 302 GKGKWKEVEELLSAVLDKGLL 322
G+G + EL ++ L
Sbjct: 442 GEGNMETALELCDEAIENCFL 462
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 194/471 (41%), Gaps = 59/471 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + ++ + M Y P+V + NA+++ L A +Y M GV +
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145
Query: 82 KFTWSLVAQILCRSGKFEVVLGLL--------DSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+T+++ + C++ + L LL DS ++V Y V+ G+ A +
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDS---NAVAYCTVVAGLYDSGEHDHARE 202
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+EM R L P ++ ++ + S+R++G ++++ + P F + +Q
Sbjct: 203 LFDEML-ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF--NIFVQ 259
Query: 194 KLSDMG---------KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
L G + AE ++ + E D T ++ K+G V++A ++
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD------------------------ 280
+G + Y + +N CK+ P+ + +D
Sbjct: 320 DAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQG 379
Query: 281 -----------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E G +P + + C G + L+ + KG D F +
Sbjct: 380 LILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYN 439
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L++ YC ++D A + ++ + DV TY+ LL+GL K G+ EE + IF M+E
Sbjct: 440 TLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK 499
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I+V LC K++ +A+ EM G KPD ++ + +GF
Sbjct: 500 GCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 195/470 (41%), Gaps = 61/470 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G DS + A V+ G E++ M P V A N L+ L ++ + +
Sbjct: 176 GCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFES 235
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L G +++ GV PN FT+++ Q LCR G LD + +S +
Sbjct: 236 ERLLGKVLKRGVCPNLFTFNIFVQGLCREGA-------LDRAVRNSRVVE---------- 278
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A + L +M NG P TY+SI+DG + + ++R++ V K P F
Sbjct: 279 ----AEEYLRKMVNG-GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I G A +FK + + ++K LS++G + A+Q+ + +
Sbjct: 334 CS--LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP------------------ 288
+E G Y +N LCK + L+ D + +G P
Sbjct: 392 AENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKL 451
Query: 289 -CAMELSRFVASQ----------------CGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
A E+ + SQ C GK +EV E+ A+ +KG + + +
Sbjct: 452 DSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNII 511
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C +++++A+ L +++ DV ++ L G K G ++ A ++F M++
Sbjct: 512 VDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD 571
Query: 392 V--SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V +++++ I+VS + AMK M G PD TY+ VI GF
Sbjct: 572 VCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 156/370 (42%), Gaps = 49/370 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P++ N L+ L +Q I A L M +G PN +T++LV LC+ G
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 102 LGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L+D I YN +ID Y K+ +A + +N M + + +TP TY+++L+
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWS-QGMTPDVITYNTLLN 478
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA-----EM----- 206
G + K+E I M EK P + + ++ L K A EM
Sbjct: 479 GLCKAGKSEEVMEIFKAMEEKGCTPN--IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536
Query: 207 ---------IFKRACD-----------EKIELQDDTC------GCMLKALSKEGRVKEAI 240
+F C ++E Q D C ++ A S++ + A+
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAM 596
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ ++ G + Y ++ CK + L + +E+ +IP R +
Sbjct: 597 KLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCL 656
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C K K E ++ +L KG++ ++ +++ E +++++ A + ++ KG +
Sbjct: 657 CVKDKVHEAVGIIHLMLQKGIVPETV--NTIFE---ADKKVVAAPKILVEDLLKKGHIAY 711
Query: 361 ATYDVLLDGL 370
TY++L DG+
Sbjct: 712 YTYELLYDGI 721
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 133/324 (41%), Gaps = 29/324 (8%)
Query: 137 EMCNGRNLTPGF----STYSSILDGARRYEKTEVSDRIVGLM---VEKKLLPKHFLSGND 189
EM N GF STY I+ + + E ++++ M V LL ++
Sbjct: 25 EMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEA-- 82
Query: 190 YVIQKLSDMGKTYAAEMIFKR----ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ GK A F+R CD + + ++ L + G +A ++Y
Sbjct: 83 --MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHN----AIMNILVEFGYHNQAHKVYMR 136
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +RG+ Y + CK +P LLR++ E G A+ VA G+
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
EL +L + L D + L+ C + ++ L K+ K ++ T+++
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256
Query: 366 LLDGLFKDGRMEEAV---RIFDYMKELKVVSSSSFVI-------VVSRLCHLKELRKAMK 415
+ GL ++G ++ AV R+ + + L+ + + F ++ C ++ A +
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+ + G KPDE TY +I+GF
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGF 340
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 182/411 (44%), Gaps = 15/411 (3%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+M R + P+ + N +L L R + A LY M+RD V P FT+ + A+ LCR
Sbjct: 131 QMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 190
Query: 96 GKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G+ L LL + +V+Y VI +G A L+EM +T
Sbjct: 191 GRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL-MGCAADVNT 249
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++ ++ G + + R+V M+ + +P G +++Q L + A + R
Sbjct: 250 FNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYG--FLLQGLCRTRQADEACAMLGR 307
Query: 211 ACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + + + GC+ EG++ A ++Y ++ +G Y ++ LCK
Sbjct: 308 LPEVNVVMLNTVIRGCL-----TEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ +L ++ E+G P + S + S C G W + +L +L KG ++S +
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYN 422
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++ C + ++D+A L +++ D+ TY+ ++ L + MEEA IF + E
Sbjct: 423 GIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE 482
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV++ ++ ++ L ++ ++ EML G + D +Y +I
Sbjct: 483 GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 171/411 (41%), Gaps = 54/411 (13%)
Query: 42 GFVPAVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
G +P V+ N ++ + ++ A+ LY M G P+ T+S++ LC+ G+F
Sbjct: 306 GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFG 365
Query: 100 VVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST---- 150
+ +LD G + V Y+ ++ + + G + A L++M L GFS
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM-----LAKGFSMNSQG 420
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+ I+ + K + + R+V M + P + + +I L + AE IF+
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPD--ICTYNTMIYHLCNNDLMEEAEHIFRN 478
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+E + T ++ AL + GR +E +++ + G + Y + LCKE
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LL ++V +G P + + C GK ++ EL +L++GL
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL--------- 589
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+ D+ TY+ L++GL K G A+ + + +
Sbjct: 590 --------------------------TPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
V ++ I++S C ++ L A D+ + G P+E T+ ++ F+
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFV 674
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G + +GL + M ++G V + N L+ AL ++ + + L MV G+ PN F+
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFS 560
Query: 85 WSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++++ LC++GK E+ +L+ G+ V YN +I+ K G AA + L ++
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 620
Query: 140 NGRNLTPGFSTYSSIL 155
N N+ P TY+ ++
Sbjct: 621 N-ENVHPDIVTYNILI 635
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 124/336 (36%), Gaps = 39/336 (11%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G E+Y MM G P V + L+ L + A + M G +PN T
Sbjct: 326 EGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVT 385
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+S + CR+G ++ +LD + +S YN +I K G A + EM
Sbjct: 386 YSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM- 444
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--------HFLSGN--- 188
+ P TY++++ + E ++ I ++E+ ++ H L N
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504
Query: 189 ----------------------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ +I+ L G + + + + I+ + + +
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNML 564
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ L K G+V++A+++ + +G+T Y +N LCK LL +
Sbjct: 565 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 624
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
P + + ++ C + LL + G++
Sbjct: 625 HPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 176/377 (46%), Gaps = 5/377 (1%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSK 124
A L+ M R + T++++ + LC +GK L LL ++V YN VI +
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCS 84
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKH 183
+G AA D + EM + P TY +++ G + + + + ++ M+ K ++ P+
Sbjct: 85 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 144
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ + +I D GK A + R + + + T ++ AL +GR EA ++
Sbjct: 145 VMY--NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 202
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ +G+ Y +N CKE ++ + ++ RG + + + + K
Sbjct: 203 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 262
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ +E ++L + +G+ D ++L+ + ++ ID+A + ++EK + + D TY
Sbjct: 263 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 322
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ L+ GL GR++EA ++ D M + + ++ ++S +++ A++ +EM+
Sbjct: 323 NTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 382
Query: 423 MGHKPDEATYKQVISGF 439
G P TY +I G
Sbjct: 383 KGFNPTLLTYNALIQGL 399
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 61/380 (16%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++PN++T+ V C+ G+ + + + D + +VMYN +I Y +G
Sbjct: 101 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 160
Query: 129 GAAF---DRLNEMCNGRNLTPGFSTYSSI-----LDGARRYEKTEVSDRIVGLMVEKKLL 180
A DR+ E R + +TY+ + +DG R E E+ + + G K L
Sbjct: 161 DTALLYRDRMVE----RGVAMTVATYNLLVHALFMDG-RGTEAYELVEEMGG----KGLA 211
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + +I G A IF+ + T ++ ALSK+G+V+E
Sbjct: 212 PDVFTY--NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ RGI Y A +N S
Sbjct: 270 KLFDEAVRRGIRPDLVLYNALIN-----------------------------------SH 294
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G E++ + K + D ++LM C ++D+A L ++ K D+
Sbjct: 295 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 354
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
TY+ L+ G G +++A+RI + M + ++ ++ LC + A E
Sbjct: 355 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 414
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G PD++TY +I G
Sbjct: 415 MVENGITPDDSTYISLIEGL 434
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 143/333 (42%), Gaps = 11/333 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
V+ + G + ++V+ M G V P NAL+ Q ++ A MV
Sbjct: 114 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 173
Query: 77 GVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
GV+ T++L+ L G+ +E+V + G+ V YN++I+ + K+G+ A
Sbjct: 174 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 233
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M R + TY+S++ + + + +D++ V + + P L + +
Sbjct: 234 LEIFENMSR-RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY--NAL 290
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I S G A I ++I D T +++ L GRV EA ++ +++RGI
Sbjct: 291 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 350
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ + ++ + +++ +G+ P + + + C G+ + E
Sbjct: 351 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 410
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCS--NRQID 342
++ +++ G+ D SL+E + R ID
Sbjct: 411 MVKEMVENGITPDDSTYISLIEGLTTEDERAID 443
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 14/382 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L++V++ +G ++ + G P N +++A + + + M
Sbjct: 207 SLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVM 266
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDF 128
+DGV NK T++L+ ++ ++GK V L D GI S + +Y +I + +KG+
Sbjct: 267 KKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNI 326
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF +E+ + L P TY +++DG + + ++ ++ M K + +
Sbjct: 327 KRAFLLFDELTE-KGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF-- 383
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I G A MI+ EK Q D TC + ++ R EA Q +
Sbjct: 384 NTLINGYCRKGMIDEASMIYD--VMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 441
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
E G+ + Y ++V CKE EE L ++ + P A+ + + + C +GK
Sbjct: 442 MEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKV 501
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDV 365
KE +L + + G+ DS+ +SL+ C +D+A+ L ++ LKG + TY V
Sbjct: 502 KEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTV 560
Query: 366 LLDGLFKDGRMEEAVRIFDYMK 387
++ GL K G+ +EA ++D +K
Sbjct: 561 MISGLSKAGKSDEAFGLYDEIK 582
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 3/235 (1%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
F+R D +++ + +++ L + G V+++ ++ S +GI Y +N
Sbjct: 192 FFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYL 251
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K V +L+ + + G + + + + GK +VE+L + ++G+ D
Sbjct: 252 KHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIH 311
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDY 385
+SL+ + C I +A L ++ + KG L + TY L+DG+ K G M A + +
Sbjct: 312 VYTSLISWNCRKGNIKRAFLLFDELTE-KGLLPSSHTYGALIDGVCKVGEMGAAEILMNE 370
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ V ++ F +++ C + +A +D M K G + D T + S F
Sbjct: 371 MQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCF 425
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 3/248 (1%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V++ L G+ ++ + K + I+ + T ++ A K +I ++ + G
Sbjct: 211 VVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDG 270
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y + + K + +V L ++ ERG + ++ C KG K
Sbjct: 271 VVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAF 330
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + +KGLL S +L++ C ++ A L +++ ++ ++ L++G
Sbjct: 331 LLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGY 390
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+ G ++EA I+D M E K + F + S LK +A + M++ G +
Sbjct: 391 CRKGMIDEASMIYDVM-EKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLS 449
Query: 429 EATYKQVI 436
+Y +I
Sbjct: 450 TVSYTNLI 457
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 194/461 (42%), Gaps = 46/461 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD Y G GL++ M+ G P N L++ L ++ E A L G M++ G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 78 V-----------------------------------SPNKFTWSLVAQILCRSGKFEVVL 102
+ SP T++ LC+ G+ +
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 103 GLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L + ++++ YN +I Y + G+ AF +E+ L P TY+++LDG
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL-RSIYLFPTIVTYNTLLDG 418
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
R + EV+ ++ M+ + + P + ++ MG A+ F E +E
Sbjct: 419 LCRQGELEVAQQLKVEMINEGIAPD--IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 476
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
L + K G A + + +G Y V+ LCK EE L
Sbjct: 477 LDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASEL 536
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L+ +V G IP + + + + G+ ++ E+ +L KGL + L+ +
Sbjct: 537 LQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAG 596
Query: 338 NRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
++++A ++++ KG L +V TY+ L++GL K RM++A F M E + +
Sbjct: 597 KGRLERAFIYFSEMQE-KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
S+ I+++ C++ ++A+ + +ML G +PD T+ ++
Sbjct: 656 SYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 8/317 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G M ++ +R P + N LLD L RQ E+ +A L M+ +G++P+
Sbjct: 384 YCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 443
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLN 136
T++++ C+ G + D ++ S Y I K GD AF
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + P Y+ ++DG + E + ++ MV ++P + + +I
Sbjct: 504 EML-AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS--IIHAHL 560
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ G+ IF + + T ++ + +GR++ A + + E+GI
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + +N LCK + ++ ++VE+G P + + C G W+E L +
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680
Query: 317 LDKGLLLDSFCCSSLME 333
LD+G+ DS S+L++
Sbjct: 681 LDRGVQPDSCTHSALLK 697
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 197/461 (42%), Gaps = 44/461 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L K L +EVYR M +G P + N LLD+ + +++ L M R G
Sbjct: 205 ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 264
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
+PN T++++ L + G+FE GL L +G+ S+ YN +I Y KG A
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
EM + +P +TY+S + G + + + + + M+ LLP + + +I
Sbjct: 325 SLQEEMV-LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD--VVSYNTLI 381
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+G A ++F + T +L L ++G ++ A Q+ + GI
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 253 VRDSDYYAFVNVLCKE--------------HQPEE---------VCGLLR---------- 279
Y VN CK H+ E + G L+
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 280 --DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+++ +G+ P + + V C G +E ELL ++ G++ D +S++ +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
N ++ K + ++ + V TY VL+ G GR+E A F M+E ++ + +
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +++ LC ++ + +A EM++ G P++ +Y +I+
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F + ++ C +L+ L + + +A+++Y + E GI Y ++ C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + ++ LL ++ RG P + + + KG++++ + L+ +L GL + ++
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV-RIFDY 385
+ L+ Y + + +A++L ++ S VATY+ + GL K GRM +A+ ++ D
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + S+ ++ C L L KA DE+ + P TY ++ G
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M GF P + N ++D L + + AS L MV DGV P+ T++ + +G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E+ +L G+ SV+ Y ++I ++ KG AF +EM + + P TY+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM-QEKGILPNVITYN 623
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S+++G + + + + MVEK + P + +I + +MG A ++K+
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY--SYTILINENCNMGNWQEALSLYKQML 681
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
D ++ T +LK L K+ +++ Q+ L+
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 5/231 (2%)
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+R C D T ++ LSK+G ++A + + + G+ V Y + +
Sbjct: 262 RRGCAP----NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
E L ++V +G P + F+ C G+ + + LS +L LL D
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI-FDYMK 387
++L+ YC + KA L ++ + + TY+ LLDGL + G +E A ++ + +
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
E ++ I+V+ C + L A + DEML G + D Y I G
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 177/413 (42%), Gaps = 46/413 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
Y M G P V N ++DAL R + R A + M V+P++ T++ + +
Sbjct: 183 AYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFV 242
Query: 94 RSGKFEVVLGL----LDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPG 147
G E L L + G +SV N++I+ Y K G G A + E+ +G P
Sbjct: 243 EEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG--FEPD 300
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
T+S+ ++G + + + +++GLM+++ P + TY+
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY----------------TYST--- 341
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
++ L G ++EA I + + + G + + + LC
Sbjct: 342 ------------------VINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E+Q EE L R++ +G P + + + C G L + G D
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ L++ CS+ ++ KA+ L ++E TY+ ++DGL K R+EEA +FD M
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +F ++ LC+ + + A + D+M+ G +P+ TY +++ +
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 186/445 (41%), Gaps = 12/445 (2%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ SC+ ++ + +++ + +G L + M G P N L++ +
Sbjct: 222 MSSCDVAPDET-TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLG 280
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGL-LDSGIYSSV-MYN 116
+ A + DG P++ T+S LC++G + VLGL L G V Y+
Sbjct: 281 RVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYS 340
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
VI+ G+ A +N+M + L P +T+++++ + E + + +
Sbjct: 341 TVINCLCNNGELEEAKGIVNQMVDSGCL-PDTTTFNTLIVALCTENQLEEALDLARELTV 399
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
K L P + + +I L +G + A +F+ + T ++ L G++
Sbjct: 400 KGLSPNVYTF--NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A+ + + G Y ++ LCK + EE + + G A+ +
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C + + EL+ ++ +GL ++ +S++ +YC I KA + +
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFD--YMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
+DV TY L++GL K R + A+++ MK +K + ++ V+ L R A+
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKP-TPKAYNPVIQSLFRGNNGRDAL 636
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
EM ++G PD TYK V G
Sbjct: 637 SLFREMTEVGGPPDAFTYKIVFRGL 661
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 164/393 (41%), Gaps = 17/393 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S V++C + G + + M G +P + N L+ AL +N++
Sbjct: 330 EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEE 389
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SG-IYSSVMYNLVID 120
A L + G+SPN +T++++ LC+ G + + L + SG V YN++ID
Sbjct: 390 ALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILID 449
Query: 121 FYSKKGDFGAAFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
G A D L EM C +T Y++I+DG + + E ++ + M +
Sbjct: 450 NLCSSGKLAKALDLLKEMEVSGCPQSTVT-----YNTIIDGLCKRRRIEEAEEVFDQM-D 503
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+ ++ ++ N +I L + + A + + E ++ + T +L K+G +
Sbjct: 504 VTGIGRNAITFNT-LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A I ++ G V Y +N LCK + + LLR + +G P +
Sbjct: 563 SKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPV 622
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKIEKLK 355
+ S ++ L + + G D+F + C I +A +++
Sbjct: 623 IQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNG 682
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ +++ +L +GL G + +R + + E
Sbjct: 683 FIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVE 715
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 179/421 (42%), Gaps = 54/421 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G+ +++ MR P V ++ AL+ A L+ M G PN T++++
Sbjct: 57 EGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMI 116
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+C+ K E ++ +++ G+ SV YN +ID Y K+G AA + L+ M + +
Sbjct: 117 NAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM-HSNSC 175
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY+ ++ G R + + ++ M+E +L P TY +
Sbjct: 176 NPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVV----------------TYNS 219
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ K G + A ++ +L++E G+ Y F++
Sbjct: 220 ---------------------LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK+ + EE L + E+G + + + C GK + LL +L + L +
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S ++L++ C R++ +A+ L + + V TY +L+ + K+G + A RI D
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378
Query: 385 YMKELKVVSS--SSFVIVVSRLCHLKELRKAMKNHDEMLKM----GHKPDEATYKQVISG 438
M VSS V + + H R +K ++M+ M G PD TY VI
Sbjct: 379 QM-----VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433
Query: 439 F 439
+
Sbjct: 434 Y 434
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 175/387 (45%), Gaps = 11/387 (2%)
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-M 114
N++ A ++ M + G N+ +++ + LC G+ + + + + Y +V
Sbjct: 17 NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +++ + G A + +EM R P TY+ +++ + K E RI+ M
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM 135
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VEK L+P + + +I G AA+ I + T ++ ++
Sbjct: 136 VEKGLVPS--VPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK 193
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
V A+ + + E +T Y + ++ CK + LL + E G +P S
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
F+ + C KG+ +E L +++ +KG+ + ++L++ YC ++D A +L ++
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRK 412
+ +TY+ L+DGL K+ +++EA+ + + M K LK + +++V+ L +
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML-KEGDFDY 372
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A + D+M+ G++PD Y I F
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAF 399
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 198/490 (40%), Gaps = 69/490 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ G M+ + ++ MR G P + +++A+ ++ ++ + MV
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G+ P+ T++ + C+ G E +LD S + YN +I + +K +
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF------ 184
A L++M R LTP TY+S++ G + + + R++ LM E ++P +
Sbjct: 198 AMALLSKMLESR-LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256
Query: 185 -----------------------LSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIE 217
+ N+ + L D GK A + R E
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ L KE +V+EA+ + + ++G+ Y + + KE + +
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L +V GY P + F+ + C +G KE E+++S + ++G++ D+ + +++ Y
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436
Query: 338 -----------NRQIDKA-----------IALHIKIEKLKGSLDVATYDVLLDGLFKD-- 373
R D I +K E K +VA D + + F D
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVA 496
Query: 374 -----GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+ E A+ +F+ M E + +++ ++ LC + L A K D M + G P
Sbjct: 497 DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP 556
Query: 428 DEATYKQVIS 437
EA Y +++
Sbjct: 557 SEAIYNSLLN 566
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 156/401 (38%), Gaps = 61/401 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y G D + M +P S NAL+D L ++ +++ A L +M++
Sbjct: 288 TALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQ 347
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS------------------------ 111
G+ T++++ + + G F+ +LD + S
Sbjct: 348 KGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKE 407
Query: 112 ----------------SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
++ Y LVID Y G AFD L M + P TYS ++
Sbjct: 408 AEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD-TGCDPSHHTYSCLI 466
Query: 156 ------DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+ ++Y+ + D I P F + + + M K A +F+
Sbjct: 467 KHLLKEELTKKYKNVALCDSI----------PNVFFAD----VADVWKMMKFETALELFE 512
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + +T ++ L K GR+ A +++ ++ERG++ ++ Y + +N C+
Sbjct: 513 KMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELG 572
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ L+ ++E G++P L+ +G ++ + + S +L G D
Sbjct: 573 IYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWK 632
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L++ N D L +E + TY +L++GL
Sbjct: 633 ILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 153/396 (38%), Gaps = 43/396 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+ +D KG + ++ ++ G AL+D + ++ A+ L M+
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGA 130
+ PN T++ + LC+ K + L L++S I + Y ++I K+GDF
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L++M + P Y++ + + ++ ++ +M E+ ++P
Sbjct: 373 AHRILDQMVSS-GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY--TL 429
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE------------ 238
VI +G A + KR D + T C++K L KE K+
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPN 489
Query: 239 -----------------AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
A++++ + E G + + Y + LCK + L +
Sbjct: 490 VFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHM 549
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS---N 338
ERG P + + C G + + L+ A+++ G L SL +C
Sbjct: 550 NERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP---LLESLNVLFCGLYEE 606
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+KA + + + + D + +L+DGL K+G
Sbjct: 607 GSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNG 642
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 182/432 (42%), Gaps = 50/432 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA-SCLYGAMV 74
S+++ C+ G G + ++ G+ N LL L +R A L M
Sbjct: 98 SILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMP 157
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSKKG 126
G +P+ +++ + + C + E L LL S + V Y VI+ + +G
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A++ EM + R + P TY++++DG K +V DR
Sbjct: 218 QVDKAYNLFLEMMD-RGIQPNVVTYTTVIDG---LCKAQVVDR----------------- 256
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
AE +F++ D+ ++ +DT C++ G+ KE +++ +
Sbjct: 257 -----------------AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
S G+ Y + +N LC + E ++ +G P + KG
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E+ +LL+ +++ GL D + + Y ID+A+ + K+++ S DV + L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMKNHDEMLKMG 424
+D L K GR+++AV F+ M + V+ + FV +V LC + + KA + + EML G
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMN-EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 425 HKPDEATYKQVI 436
+PD + ++
Sbjct: 479 IRPDVVFFNTIL 490
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 167/401 (41%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + +++ + + ++ A L+ M+ G+ PN T++ V LC++ + G+
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
I V YN +I Y G + L EM + L P TY S+L+
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKPDCYTYGSLLNYLC 319
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + M+ K + P + G +I + G + + +
Sbjct: 320 NNGRCREARFFFDSMIRKGIKPNVAIYG--ILIHGYATKGALSEMHDLLNLMVENGLSPD 377
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ A +K+ + EA+ I++ + ++G++ ++ A ++ LCK + ++
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFN 437
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ G P + V C KW++ +E +L++G+ D ++++ C+
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
Q+ KA L +E++ DV +Y L+ G GR++EA + D M + + ++
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C + A EML+ G P TY ++ G
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/446 (17%), Positives = 175/446 (39%), Gaps = 53/446 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G +D + ++ Y G + + + + M +G P +LL+ L R
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVID 120
A + +M+R G+ PN + ++ G + LL+ + + + ++N++
Sbjct: 327 ARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386
Query: 121 FYSKKG----------------------DFGAAFDRL-------------NEMCNGRNLT 145
Y+KK +FGA D L N+M N +
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN-EGVA 445
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P ++S++ G +K E + M+ + + P + ++ L G+ A+
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF--NTILCNLCTKGQVMKAQ 503
Query: 206 MIFKRACDEKIELQDDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+ E++ + D ++ GR+ EA + ++ G+ + Y ++
Sbjct: 504 RLIDLM--ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C+ + ++ G+ R+++ G P + S + ++ E +EL ++ G
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ + + ++ N +D+A L + L++ T+++++ LFK GR E+A+ +F
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKE 409
+SS V V C + E
Sbjct: 682 ------ATISSYGLVPDVFTYCLIAE 701
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + C+ + E +++ G+ + +++ + C + +E ++L +
Sbjct: 97 YSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRM 156
Query: 318 DK-GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVLLDGLFKD 373
+ G D ++L++ +C+ ++ ++A+ L + +G +V +Y +++G F +
Sbjct: 157 PELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTE 216
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G++++A +F M + + + ++ V+ LC + + +A +M+ G KPD TY
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTY 276
Query: 433 KQVISGFM 440
+I G++
Sbjct: 277 NCLIHGYL 284
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 188/457 (41%), Gaps = 50/457 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ + + + M G P V N +++ L R N + G M + GV P+ T++
Sbjct: 94 YTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTT 153
Query: 88 VAQILCRSGKFE-----------------------VVLGLLDSGIYSSVM---------- 114
+ LC G ++ GL G S+ +
Sbjct: 154 IVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN 213
Query: 115 -------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
YN V+D K G A+D ++M G+ + P TY+ ++ G +++ + +
Sbjct: 214 CNLDVTAYNAVVDGLCKDGMVFEAWDLFSQM-TGKGIQPDLFTYNCLIHGLCNFDRWKEA 272
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
++ M+ K ++P + + + + G A+ IF IE T ++
Sbjct: 273 APLLANMMRKGIMPD--VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSII 330
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
++K+A++++ L+ +G Y + ++ C+ + L ++V G
Sbjct: 331 GVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLD 390
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + C GK +EL + G L D C+ +++ +A++L
Sbjct: 391 PNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 450
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCH 406
++EK+ LD+ Y ++L+G+ G++ +A+ +F Y+ V + ++ I+++ LC
Sbjct: 451 FRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCK 510
Query: 407 LKELRKAMKNHDEMLKM---GHKPDEATYKQVISGFM 440
L A D ++KM G PDE TY + G +
Sbjct: 511 EGLLDDA---EDLLMKMEENGCPPDECTYNVFVQGLL 544
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 146/410 (35%), Gaps = 69/410 (16%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+ Y M P V N L + + A L M GV PN T ++V
Sbjct: 62 ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVIN 121
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
LCR V G G+ M+ + ++ P T
Sbjct: 122 CLCRLN--HTVFGFSVLGL----MFKIGVE-------------------------PSIVT 150
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+++I++G + R V L DMG
Sbjct: 151 FTTIVNGLCVEGNVAQAIRFV---------------------DHLKDMG----------- 178
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
E T G ++ L K G A+ + E+ + + Y A V+ LCK+
Sbjct: 179 -----YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGM 233
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E L + +G P + + C +WKE LL+ ++ KG++ D +
Sbjct: 234 VFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNV 293
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+ + I +A ++ + + DV TY ++ +M++A+ +FD M
Sbjct: 294 IGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKG 353
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ C +K + KAM EM+ G P+ T+ +I GF
Sbjct: 354 CLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGF 403
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 143/349 (40%), Gaps = 14/349 (4%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
V+A NA++D L + + A L+ M G+ P+ FT++ + LC +++ LL
Sbjct: 218 VTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLA 277
Query: 107 SGIYSSVM-----YNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGA 158
+ + +M +N++ + K G A F + M ++ TYSSI+
Sbjct: 278 NMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVV----TYSSIIGVH 333
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ + + + LM+ K LP + +I ++ A + ++
Sbjct: 334 CMLNQMKDAMEVFDLMIRKGCLPN--IVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDP 391
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ K G+ A +++ ++ + G ++ L K H E L
Sbjct: 392 NIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLF 451
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
R++ + + S + C GK + EL S + KG+ +D + ++ C
Sbjct: 452 RELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKE 511
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+D A L +K+E+ D TY+V + GL + + ++ + +MK
Sbjct: 512 GLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMK 560
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 142/368 (38%), Gaps = 45/368 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+D G+ + +++ M G P + N L+ L + + A+ L M
Sbjct: 220 AYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 279
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDF 128
+R G+ P+ T++++ ++G + GI + V Y+ +I +
Sbjct: 280 MRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQM 339
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + M + P TY+S++ G + + +G MV L P +
Sbjct: 340 KDAMEVFDLMIR-KGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPN--IVTW 396
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSK--------------- 232
+ +I GK AA+ +F + +L D TC +L L K
Sbjct: 397 NTLIGGFCKAGKPVAAKELF-FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE 455
Query: 233 --------------------EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
G++ +A++++ +S +G+ + Y +N LCKE +
Sbjct: 456 KMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLD 515
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LL + E G P + FV + + + + L + KG ++ L+
Sbjct: 516 DAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 575
Query: 333 EYYCSNRQ 340
Y+ +N++
Sbjct: 576 NYFSANKE 583
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 207/467 (44%), Gaps = 47/467 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++++CY GL V+ R++R G P V + NAL+D ++ E+ A L+ M
Sbjct: 122 NILINCYRRARRPDLGLPVFGRLLRT-GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKME 180
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFG 129
G+ PN T+S + LC++ + + V+ ++ +G+ + M YN +I YS G +
Sbjct: 181 EQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWK 240
Query: 130 AAFDRLNEM-----------CNG-----------------------RNLTPGFSTYSSIL 155
+ EM CN + P +Y ++L
Sbjct: 241 ESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALL 300
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
G D + +MV + ++P +H + +I + +G + ++F+ +
Sbjct: 301 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVF---NTLINAYARLGMMDKSLLMFEDMTKQ 357
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T ++ A + GR+ +A++ ++ + + G+ + Y + C +
Sbjct: 358 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 417
Query: 275 CGLLRDVVERGYIP-CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L+ D++ +G P C + + + C +G+ E ++++ ++ G + +SL++
Sbjct: 418 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVD 477
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVV 392
YC + +A+ L +E + D+ TY+ L+DG K GR+++A+ +F D + + +
Sbjct: 478 GYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTL 537
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S S+ I++ L + A + EM++ G TY V+ G
Sbjct: 538 TSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 584
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 173/432 (40%), Gaps = 70/432 (16%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + N L++ R L ++G ++R G+ P+ F+
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFS-------------------- 155
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
YN +ID +SK+G+ A D +M + + P TYSS+++G + ++
Sbjct: 156 ----------YNALIDGFSKEGEVDKAHDLFYKM-EEQGIMPNVVTYSSLINGLCKTKEM 204
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ ++R++ MV + P + + +I S G + +FK + C
Sbjct: 205 DKAERVLRQMVGAGVRPNNMTY--NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 262
Query: 225 CMLKALSKEGRVKEAIQIY-----------------------------------HLISER 249
+ AL K GR+KEA I+ +++
Sbjct: 263 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 322
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + +N + ++ + D+ ++G P + S +++ C G+ +
Sbjct: 323 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 382
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-HIKIEKLKGSLDVATYDVLLD 368
E + ++D G+ D+ S L++ C+ R + KA L + K + + +++
Sbjct: 383 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 442
Query: 369 GLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
L K+GR+ E + D + + + +F +V C + +++A+ D M +G +P
Sbjct: 443 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEP 502
Query: 428 DEATYKQVISGF 439
D TY ++ G+
Sbjct: 503 DIYTYNTLVDGY 514
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/459 (18%), Positives = 182/459 (39%), Gaps = 49/459 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G++ + + V++ M VP V CN+ + AL + I+ A ++ +MV G P+
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292
Query: 82 KFTWSLV----AQILCRSGK---FEVV---------------------LGLLD------- 106
++ + A C +G F V+ LG++D
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352
Query: 107 ----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
G+ ++ ++ VI + + G A ++ N M + + P + YS ++ G
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID-TGVPPDTAVYSCLIQGQCNR 411
Query: 162 EKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ ++ M+ K + P K F S +I L G+ + +
Sbjct: 412 RDLVKAKELISDMLSKGIPPPCIKFFTS----IINNLCKEGRVAEGKDVVDLIIHTGQRP 467
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ G +KEA+ + + G+ Y V+ CK + ++ L
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
RD++ + ++ + + + +E+ +++ G+ + ++++ C N
Sbjct: 528 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 587
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
D+A L K+ + D+ T+++++ +FK GR +EA +F + +V + ++
Sbjct: 588 NCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTY 647
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++++ L + A M K PD ++I
Sbjct: 648 RVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 686
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 134/310 (43%), Gaps = 12/310 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + ++++ L ++ + + ++ G PN T++ + C G + +GL
Sbjct: 432 PCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 491
Query: 105 LDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LDS G+ + YN ++D Y K G A +M + R +T +Y+ IL G
Sbjct: 492 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR-VTLTSVSYNIILHGLF 550
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ +T V+ + M+E + +S + Y V+ L T A M+ ++ ++
Sbjct: 551 QARRTIVAKEMFHEMIESGMA----VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 606
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T +++A+ K GR +EA +++ IS G+ Y + L KE E+ L
Sbjct: 607 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNL 666
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ + P + L+ + KG+ + LS + KG+L ++ S L+ +
Sbjct: 667 FSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSV 726
Query: 338 NRQIDKAIAL 347
N + + I L
Sbjct: 727 NGKYREYIKL 736
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 176/461 (38%), Gaps = 74/461 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y+ G ++ +M G VP N L++A R + + ++ M + G
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
V+P+ T+S V CR G+ + + ++D+G+ + +Y+ +I + D A
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAK 418
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIV------GLMVEKKLLPK 182
+ +++M + P ++SI++ R E +V D I+ L+ L+
Sbjct: 419 ELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDG 478
Query: 183 HFLSGN-------------------DYVIQKLSD----MGKTYAAEMIFKRACDEKIELQ 219
+ L GN Y L D G+ A +F+ +++ L
Sbjct: 479 YCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLT 538
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ +L L + R A +++H + E G+ V Y + LC+ + +E LL
Sbjct: 539 SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLE 598
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + + + + G+ +E +EL +A+ GL+
Sbjct: 599 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPT--------------- 643
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+ TY V++ L K+ E+A +F M++ S +
Sbjct: 644 --------------------ILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 683
Query: 400 VVSR-LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ R L + E+ KA ++ K G P+ T +I F
Sbjct: 684 EIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 724
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 188/438 (42%), Gaps = 11/438 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D S S +++ +G + +++ M G P V A + +L
Sbjct: 266 DGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCE 325
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG-----LLDSGIYSSVMYNLVID 120
A L G M + G PN T++ + L R GKFEV +G L D + ++V Y+ +I+
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+G F A M + +L P TY+ I+ G + + I M+ K
Sbjct: 386 QLYVEGRFETALTIFEWMLSHDSL-PNTETYNVIIKGFCSIGYIQKATAIFDQML--KAG 442
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + +I G A + + ++L T ++ S+ G+++ A
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ + E GI+ Y A +N + ++ L +VE G +P + + ++
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+ E E ++ +GLL + +S ++ C N + A + +++K ++
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
TY L+DGL ++G+ E+A R+ D E V ++ +V LC +A + + M
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLLDDGCEPNV---DTYTTLVRGLCGKGRCYEADQLVESM 679
Query: 421 LKMGHKPDEATYKQVISG 438
K G +P E Y+ ++ G
Sbjct: 680 KKKGLQPSEEIYRALLVG 697
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 178/426 (41%), Gaps = 17/426 (3%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S G F + VY M G VP +AL++ LY + A ++ M+ PN
Sbjct: 353 SRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNT 412
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNE 137
T++++ + C G + + D + + + YN++I Y K+G A RL E
Sbjct: 413 ETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM-RLLE 471
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M G L TY++++ G R K E + + MVE + P + + +I
Sbjct: 472 MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN--VVTYNAIINGYLT 529
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+ K A +F + + T M+ SK R+ EA + ++G+
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y +F++ LCK + + ++ +R Y P S + C +G+ ++ E LL
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL---- 645
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGR 375
D G + ++L+ C + +A L +K + L+ S ++ Y LL G K+
Sbjct: 646 DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEI--YRALLVGQCKNLE 703
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+E A++IFD M S + ++ LC +KA MLK DE +
Sbjct: 704 VESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTV 763
Query: 435 VISGFM 440
++ G +
Sbjct: 764 LLDGLL 769
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 194/432 (44%), Gaps = 40/432 (9%)
Query: 33 EVYRMMRV-------YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
EV R+++V Y F + + + LL L + + L +Y M+ G+ PN FT+
Sbjct: 146 EVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTF 205
Query: 86 SLVAQILCRSGKF---EVVLGLL-------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+ + +ILC GK E+++G + D+ Y+S++ + K G+ AF+
Sbjct: 206 NAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIG-----HCKNGNLDLAFEMF 260
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+ M P TYS++++G + E + ++ M++K + P + I L
Sbjct: 261 DRMVKD-GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPT--VHAYTIPIVSL 317
Query: 196 SDMGKTYAAEMIF----KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
D G++ A + KR C ++ T ++ LS++G+ + AI +YH + G+
Sbjct: 318 CDAGRSCEAVKLLGKMKKRGCGPNVQ----TYTALISGLSRDGKFEVAIGVYHKMLADGL 373
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y A +N L E + E + ++ +P + + C G ++
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLD 368
+ +L G + + ++ Y ++ A+ L +E +KG+ LD TY L+
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRL---LEMMKGNGLKLDTWTYANLIS 490
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + G++E A +F+ M E + + ++ +++ + ++ A+ +M++ G+ P
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550
Query: 428 DEATYKQVISGF 439
TY +ISGF
Sbjct: 551 SSGTYNMMISGF 562
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 183/423 (43%), Gaps = 19/423 (4%)
Query: 29 MDGL--EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
MDGL +VY M G P + NA++ L + +++ A + G + G P+ FT++
Sbjct: 182 MDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYT 241
Query: 87 LVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ C++G ++ + D + +SV Y+ +I+ +G A D L EM +
Sbjct: 242 SLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMID- 300
Query: 142 RNLTPGFSTYS----SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
+ + P Y+ S+ D R E +++G M ++ P + +I LS
Sbjct: 301 KGIEPTVHAYTIPIVSLCDAGRSCEAV----KLLGKMKKRGCGPN--VQTYTALISGLSR 354
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
GK A ++ + + + T ++ L EGR + A+ I+ +
Sbjct: 355 DGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTET 414
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + C ++ + +++ G P + + + +G LL +
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
GL LD++ ++L+ + +++ A +L ++ + S +V TY+ +++G +++
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534
Query: 378 EAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+A+ +F M E V SS ++ +++S + +A +M+K G P+ TY I
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 437 SGF 439
G
Sbjct: 595 DGL 597
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 164/404 (40%), Gaps = 49/404 (12%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G F L ++ M + +P N ++ I+ A+ ++ M++ G SPN T
Sbjct: 390 EGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVIT 449
Query: 85 WSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++++ I + G + LL+ +G+ + Y +I +S+ G AF NEM
Sbjct: 450 YNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMV 509
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN-DYVIQKLSDM 198
++P TY++I++G K + + + MVE +P SG + +I S
Sbjct: 510 E-HGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS---SGTYNMMISGFSKT 565
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ AE + + + T + L K GR A +I+H + +R Y
Sbjct: 566 NRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTY 625
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ ++ LC+E Q E+ LL D E P + V CGKG+ E ++L+ ++
Sbjct: 626 SSLIDGLCQEGQAEDAERLLDDGCE----PNVDTYTTLVRGLCGKGRCYEADQLVESMKK 681
Query: 319 KGLLLDSFCCSSLMEYYCSNRQID-----------------------------------K 343
KGL +L+ C N +++ K
Sbjct: 682 KGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQK 741
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
A + + K + D + VLLDGL K+G + ++ + M+
Sbjct: 742 AQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVME 785
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 166/408 (40%), Gaps = 15/408 (3%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
YG P +L+ + + LA ++ MV+DG PN T+S + LC G+ E
Sbjct: 231 YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290
Query: 101 VLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+ +L D GI +V Y + I G A L +M R P TY++++
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKM-KKRGCGPNVQTYTALI 349
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G R K EV+ + M+ L+P +I +L G+ A IF+
Sbjct: 350 SGLSRDGKFEVAIGVYHKMLADGLVPTAVTY--SALINQLYVEGRFETALTIFEWMLSHD 407
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+T ++K G +++A I+ + + G + Y +++ K+
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL + G + ++ GK + L + +++ G+ + ++++ Y
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKV 391
+ ++D A+AL K+ + TY++++ G K R+ EA M + V
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNV 587
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +SF + LC A K EM K + P+ TY +I G
Sbjct: 588 ITYTSF---IDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 12/352 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ Y +G + + + MM+ G L+ R ++ A L+ MV
Sbjct: 451 NIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVE 510
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFGA 130
G+SPN T++ + K + L L ++SG + SS YN++I +SK
Sbjct: 511 HGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISE 570
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + +M + L P TY+S +DG + +T ++ +I M ++ P L
Sbjct: 571 AENFCGKMVK-QGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPN--LCTYSS 627
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ AE + C+ + DT +++ L +GR EA Q+ + ++G
Sbjct: 628 LIDGLCQEGQAEDAERLLDDGCEPNV----DTYTTLVRGLCGKGRCYEADQLVESMKKKG 683
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + Y A + CK + E + +V G+ PC + + + C ++ +
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+ +L K D + L++ + D ++ L +E +L+ T
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 12/221 (5%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDY--YAFVNVLCKEHQPEEVCGLLRDV-- 281
M+K+ EG VK IQ+ I+ T D Y Y+F +L + + ++ GL RDV
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEIN----TTYDFGYTLYSFSTLLIQLGK-FDMDGLGRDVYI 191
Query: 282 --VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ G P + + C KGK +E E ++ + G D+F +SL+ +C N
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
+D A + ++ K + TY L++GL +GR+EEA+ + + M + + + ++
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I + LC +A+K +M K G P+ TY +ISG
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGL 352
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 181/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A N ++D +++ ++ A L+ MV+ G+ P+ T++ V
Sbjct: 203 DLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVH 262
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM ++
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSIL 321
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P T S ++ +Y K + + + M K P F + N Y + L DM
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD- 380
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 381 -----LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G P + + C G + +EL+S +++ G+
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD SS++ C ++ A + + D Y +L+DG G+ME+A+R
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 555
Query: 382 IFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 182/432 (42%), Gaps = 34/432 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G++ + +++L+ Y+ KG +D +++ +M G P N L+ A +
Sbjct: 353 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 412
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A ++ M GV P+ T+ V LCR GK + + + +++
Sbjct: 413 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-----------------EKFNQM 455
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A D+ C L GF T+ S+L + + I +M L F
Sbjct: 456 IDQGVAPDKYAYNC----LIQGFCTHGSLL---------KAKELISEIMNNGMHLDIVFF 502
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I L +G+ A+ IF + + ++ G++++A++++
Sbjct: 503 SS---IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI Y VN CK + +E L R++++RG P + S + G+
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ +D + ++ NR D+AI L ++ + +++ T +
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++DG+F+ R+EEA +F + ++V S ++ I+++ L + +A M G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 425 HKPDEATYKQVI 436
+P+ V+
Sbjct: 740 CEPNSRLLNHVV 751
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 165/371 (44%), Gaps = 46/371 (12%)
Query: 77 GVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG----IYSSVMYNLVIDFYSKKGDFG 129
G P+ F++S++ + LC +SG+ + +L ++ G + V YN VID + K+GD
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A D EM R + P TY+S++ + + ++ + MV K++LP ++ N
Sbjct: 237 KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN- 294
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I S G+ A +FK I T ++ +L K G++KEA ++ ++ +
Sbjct: 295 -LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G ++ D +++ +++ GY KG ++
Sbjct: 354 G---QNPDVFSY------------------NIMLNGY--------------ATKGCLVDM 378
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D + + L++ Y + +DKA+ + ++ DV TY ++
Sbjct: 379 TDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAA 438
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + G+M++A+ F+ M + V ++ ++ C L KA + E++ G D
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 429 EATYKQVISGF 439
+ +I+
Sbjct: 499 IVFFSSIINNL 509
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 92 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANH 151
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K CD+ Q D
Sbjct: 152 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 222 --TC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C ++ KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 271
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V + +P + + G+WKE + + +L D S LM
Sbjct: 272 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL---------------------DGLF 371
C +I +A + + + DV +Y+++L DG+
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 372 KD--------------GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D G +++A+ IF+ M++ V ++ V++ LC + ++ AM+
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGF 474
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/410 (17%), Positives = 166/410 (40%), Gaps = 43/410 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY------------------- 110
+ GV+P+K+ ++ + Q C G E++ ++++G++
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 111 -----------------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+V+Y++++D Y G A + M + + P Y +
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVVYCT 574
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + + + M+++ + P L +I L G+T A++ F +
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYS--IIIDGLFQAGRTVPAKVKFHEMTE 632
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I + T +L+ L K EAI ++ + + + ++ + + + EE
Sbjct: 633 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + +P + S + + +G +E E++ S++ + G +S + ++
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 752
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 753 ELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 188/415 (45%), Gaps = 29/415 (6%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
Y F + + LL L + + + LA +Y M+ G+ P+ T++ + ILC+ G+ +
Sbjct: 161 YDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 101 VLGLLDSGIY------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
L+ S I+ ++ Y +I + + + AF + M P TYS++
Sbjct: 221 A-KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTL 278
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ--KLSDMG-KTYAAEMIFK-- 209
++G + E + ++ MV+K + P + Y I L D G + A E++ K
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVY----TYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 210 -RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
R C I+ T ++ LS++G+ + AI +YH + G+ Y A +N LC E
Sbjct: 335 KRGCVPNIQ----TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVE 390
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ E + + ++ G +P + + C G ++ + +L G +
Sbjct: 391 GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITY 450
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ YC ++ A+ L +E +KG+ D TY L+ G + G++E A +F
Sbjct: 451 NTLIYGYCKQGNLNNAMRL---LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + + ++ ++ +L ++ A+ +M++ G+ P TY +ISGF
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 171/406 (42%), Gaps = 41/406 (10%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S G F + +Y M G VP NAL++ L + A ++ M+ G P+
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNE 137
T++ + + C G + + + D + + + YN +I Y K+G+ A RL E
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM-RLLE 471
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-----------LS 186
+ G L P TY+ ++ G R K E + + M+E + P H L+
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 187 GND---YVIQKLSDMGKTYAAE----MIFKRACDEKIELQDDTCGCMLK----------- 228
D + K+ + G +++ MI + I ++ CG M+K
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591
Query: 229 ----ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE--EVCGLLRDVV 282
L + GR A +I+H + +R Y + + LC+E + E E+ LL +
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLT 651
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
G P + V CG+G+ E ++L+ ++ KGL +L+ C N +++
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
A+ + ++ L L ++ Y L+ L K+ +EEA IF M E
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 170/420 (40%), Gaps = 52/420 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +E+ M+ G VP + AL+ L R + +A LY M+ DG+ P T++ +
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Query: 90 QILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC G+FE + + S+ YN +I + GD A ++M +
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS- 443
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY++++ G + + R++ +M L P + TY
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW----------------TYTE 487
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ S+ G+++ A +++ + E GI+ Y A ++
Sbjct: 488 ---------------------LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ ++ L +VE G +P + + ++ E E ++ +GLL +
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA----- 379
+S ++ C N + A + ++EK ++ TY L+ GL ++GR E+A
Sbjct: 587 VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNL 646
Query: 380 -VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
R+ Y E V ++ +V LC +A + M K G +P E Y+ ++ G
Sbjct: 647 LARLTHYGCEPNV---DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 175/417 (41%), Gaps = 17/417 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++Y M G P++ N +++ L ++ ++ A + + R PN FT++ +
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247
Query: 93 CRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR+ ++ + D + +SV Y+ +I+ +G A D L EM + + P
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPT 306
Query: 148 FSTYS----SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
TY+ S+ D E E ++G M ++ +P + +I LS GK
Sbjct: 307 VYTYTIPLVSLCDAGCSSEAVE----LLGKMKKRGCVPN--IQTFTALISGLSRDGKFEI 360
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A ++ + + + T ++ L EGR + A I+ + G Y +
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C ++ + +++ G P + + + C +G LL + GL
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP 480
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D++ + L+ + +++ A +L + + S + TY ++DG F ++++A+ +F
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 384 DYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + SS ++ +++S + +A +M+K G P+ TY I G
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 163/381 (42%), Gaps = 19/381 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y +G + + + +M+ G P L+ R ++ A+ L+ M+ G+SPN
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 82 KFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + K + L L ++SG + SS YN++I +SK A +
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + L P TY+S +DG R +T ++ +I M ++ P + + +I L
Sbjct: 577 KMVK-QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS--LIYGLC 633
Query: 197 DMGKTYAAEM--IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ AEM + R E DT ++K L EGR EA Q+ + ++G+
Sbjct: 634 QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE--- 311
+ Y A + CK + E + + G+ + LS + A C K +EE
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGF---QLHLSDYKALICALCKENFIEEAQC 750
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ +L+K D + L++ + D + L +E +L+ TY +L L
Sbjct: 751 IFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL- 809
Query: 372 KDGRMEEAVRIFDYMKELKVV 392
++ A++I ++L +V
Sbjct: 810 --SALDCAIKIPQISQQLGIV 828
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 35/271 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y + D L ++ M G +P+ N ++ + N I A G MV+ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ PN T++ LCR+G+ G AF +E
Sbjct: 583 LLPNVITYTSFIDGLCRNGR------------------------------TGLAFKIFHE 612
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLLPKHFLSGNDYVIQKL 195
M RN P TYSS++ G + + E ++ ++ + P + +++ L
Sbjct: 613 M-EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN--VDTYTTLVKGL 669
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+ Y A+ + + ++ ++ +L K +V+ A+ I++ + G +
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
SDY A + LCKE+ EE + + ++E+ +
Sbjct: 730 SDYKALICALCKENFIEEAQCIFQTMLEKHW 760
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 163/372 (43%), Gaps = 13/372 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SLV + H L++ + M G P + CN L++ + I A ++ +++
Sbjct: 96 SLVKSKHYHTVLYLS-----KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 150
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGA 130
G +PN T++ + + LC G+ L D + ++ + Y +ID K G+ A
Sbjct: 151 MGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRA 210
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L + +G+ + P YS+I+DG + + + + MV K + P +
Sbjct: 211 ALDLLRRV-DGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN--VVTYSA 267
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +GK A +F + E I+ T ++ K G++ A+++ + +RG
Sbjct: 268 LISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y + ++ LCK H+ ++ LL + ++G P + + C GK ++
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ +L KG + + +C D+A AL K+E+ D TY+++ L
Sbjct: 388 NIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSL 447
Query: 371 FKDGRMEEAVRI 382
FK G + A ++
Sbjct: 448 FKKGENDMAEKL 459
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 176/412 (42%), Gaps = 25/412 (6%)
Query: 41 YGFVPAVSACNALLD------ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
+ F+P S+ L+ + N++ A L+ ++R +P ++ + L +
Sbjct: 40 FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVK 99
Query: 95 SGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCN-GRNLTPGF 148
S + VL L + + NLV I+ + + G AF ++ G N P
Sbjct: 100 SKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYN--PNT 157
Query: 149 STYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
T+++++ G + ++ D++V L + + L I L +G+T AA
Sbjct: 158 ITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTL------IDGLCKVGETRAA 211
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ +R + ++ ++ + K+ V +A +Y + +GI+ Y A ++
Sbjct: 212 LDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 271
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ ++ L ++ P + V C GK +L+ + D+G +
Sbjct: 272 FFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPN 331
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF- 383
SS+++ C ++DKA+AL K++ ++ TY +L+DGL G++E+A IF
Sbjct: 332 IVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFE 391
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
D + + ++ +++++ C +A +M + G PD TY+ +
Sbjct: 392 DLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 1/218 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
C ++ + G + A ++ I + G + + LC + Q + +
Sbjct: 124 NCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKL 183
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V G+ + + C G+ + +LL V K + + S++++ C ++ +
Sbjct: 184 VALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHV 243
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+ A L+ ++ S +V TY L+ G F G++++AV +F+ M + +F I+
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
V C ++ A+K DEM G P+ TY ++
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 7/209 (3%)
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V +A+ +++ + + T ++ + L K V L + + RG P + +
Sbjct: 68 VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G + + +L G ++ ++L++ C QI +A+ H K+ L
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSSSSFVIVVSRLCHLKELR 411
+ +Y L+DGL K G A+ R+ + + VV S+ ++ +C K +
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYST---IIDGMCKDKHVN 244
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGFM 440
A + EM+ G P+ TY +ISGF
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFF 273
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 184/459 (40%), Gaps = 75/459 (16%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----G 108
L+ LY +R A L MV+DG S N ++L+ + LC+ G+ GLLD G
Sbjct: 255 LIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRG 314
Query: 109 IYSSVM-YNLVIDFYSKKGDF------------------------------GAAFDRLNE 137
+ SV YN +ID Y K G G D E
Sbjct: 315 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEE 374
Query: 138 MCNG---RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE------------------ 176
+ NG R TP T++++++G + E+ + + R+ M+
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434
Query: 177 --------KKLLPKHFLSG---NDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDD 221
K+ L + F +G N + + D +G AA +FK E
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L ++ ++ +A+ + + E GIT Y + CK+H+ + L +
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM 554
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G P + + C G+ EE S ++ KG++L +SL++ +
Sbjct: 555 EKNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNT 611
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIV 400
D A L K+ D+ TY VLL L K ++ EA+ I D M V + ++ I+
Sbjct: 612 DFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTII 671
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S + + A +EM+ GHKP TY IS +
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 169/431 (39%), Gaps = 67/431 (15%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E M G P V +++D + + A ++ M +G PN +T+ + L
Sbjct: 444 ETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503
Query: 93 CRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ K + L+ + GI V+ Y +I KK +F AF RL EM LTP
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF-RLFEMMEKNGLTPD 562
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAE 205
Y+ + D + + E +V K ++ L+ Y ++ S G T A
Sbjct: 563 EQAYNVLTDALCKSGRAE---EAYSFLVRKGVV----LTKVTYTSLVDGFSKAGNTDFAA 615
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ ++ +E + T +L+AL K+ ++ EA+ I ++ G+ Y ++ +
Sbjct: 616 VLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEM 675
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
KE + + L +++ G+ P A + F++S C G+ +E E L+
Sbjct: 676 IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG----------- 724
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++E+ + DV TY + ++G G M+ A
Sbjct: 725 ------------------------EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR 760
Query: 386 MKE-----------------LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
M + LK+ ++ I S + + EL + + M+K G P
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPT 820
Query: 429 EATYKQVISGF 439
TY +I+GF
Sbjct: 821 VVTYSSIIAGF 831
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K L KEGR+ +A + + RG+ Y A ++ CK + ++ G+ + + G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + CG GK E EELL+ + +G ++L+ YC +ID A+
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
+ + LD+ Y VL++ L K R++EA + M + + + ++
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY 468
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C + + A++ M G P+ TY +I G +
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 140/366 (38%), Gaps = 24/366 (6%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E Y + G V +L+D + A+ L MV +G + +T+S++ Q L
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640
Query: 93 CRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ K L +LD SG+ +++ Y ++I K+G A NEM + + P
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH-KPS 699
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+TY+ + + + E ++ ++G M + P + I MG A
Sbjct: 700 ATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPD--VVTYHIFINGCGHMGYMDRAFST 757
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVK-------------EAIQIYHLIS---ERGI 251
KR D E T +LK K + E ++ L+ + G+
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL 817
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + + CK + EE C LL ++ + P + + C + +
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVS 877
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
++ +++ G L+ C D+A +L + + + + + +L DGL
Sbjct: 878 FVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLL 937
Query: 372 KDGRME 377
K G ++
Sbjct: 938 KAGHVD 943
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+AIQ + + + + Y + L + E + L +V+ G +P + + +
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ C KG + + G+ +D++ C++L+ YC + KA L + + +
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246
Query: 358 LDVATYDVLLDGLFKDGRMEEA-VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKN 416
+ +Y +L+ GL++ + EA V +F +++ ++ + +++ LC + A
Sbjct: 247 RNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGL 306
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
DEM G P TY +I G+
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGY 329
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 188/415 (45%), Gaps = 29/415 (6%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
Y F + + LL L + + + LA +Y M+ G+ P+ T++ + ILC+ G+ +
Sbjct: 161 YDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 101 VLGLLDSGIY------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
L+ S I+ ++ Y +I + + + AF + M P TYS++
Sbjct: 221 A-KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTL 278
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ--KLSDMG-KTYAAEMIFK-- 209
++G + E + ++ MV+K + P + Y I L D G + A E++ K
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVY----TYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 210 -RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
R C I+ T ++ LS++G+ + AI +YH + G+ Y A +N LC E
Sbjct: 335 KRGCVPNIQ----TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVE 390
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ E + + ++ G +P + + C G ++ + +L G +
Sbjct: 391 GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITY 450
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ YC ++ A+ L +E +KG+ D TY L+ G + G++E A +F
Sbjct: 451 NTLIYGYCKQGNLNNAMRL---LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + + ++ ++ +L ++ A+ +M++ G+ P TY +ISGF
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 171/406 (42%), Gaps = 41/406 (10%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S G F + +Y M G VP NAL++ L + A ++ M+ G P+
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNE 137
T++ + + C G + + + D + + + YN +I Y K+G+ A RL E
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM-RLLE 471
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-----------LS 186
+ G L P TY+ ++ G R K E + + M+E + P H L+
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 187 GND---YVIQKLSDMGKTYAAE----MIFKRACDEKIELQDDTCGCMLK----------- 228
D + K+ + G +++ MI + I ++ CG M+K
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591
Query: 229 ----ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE--EVCGLLRDVV 282
L + GR A +I+H + +R Y + + LC+E + E E+ LL +
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLT 651
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
G P + V CG+G+ E ++L+ ++ KGL +L+ C N +++
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
A+ + ++ L L ++ Y L+ L K+ +EEA IF M E
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 170/420 (40%), Gaps = 52/420 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +E+ M+ G VP + AL+ L R + +A LY M+ DG+ P T++ +
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Query: 90 QILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC G+FE + + S+ YN +I + GD A ++M +
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS- 443
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY++++ G + + R++ +M L P + TY
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW----------------TYTE 487
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ S+ G+++ A +++ + E GI+ Y A ++
Sbjct: 488 ---------------------LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ ++ L +VE G +P + + ++ E E ++ +GLL +
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA----- 379
+S ++ C N + A + ++EK ++ TY L+ GL ++GR E+A
Sbjct: 587 VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNL 646
Query: 380 -VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
R+ Y E V ++ +V LC +A + M K G +P E Y+ ++ G
Sbjct: 647 LARLTHYGCEPNV---DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 175/417 (41%), Gaps = 17/417 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++Y M G P++ N +++ L ++ ++ A + + R PN FT++ +
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247
Query: 93 CRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR+ ++ + D + +SV Y+ +I+ +G A D L EM + + P
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPT 306
Query: 148 FSTYS----SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
TY+ S+ D E E ++G M ++ +P + +I LS GK
Sbjct: 307 VYTYTIPLVSLCDAGCSSEAVE----LLGKMKKRGCVPN--IQTFTALISGLSRDGKFEI 360
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A ++ + + + T ++ L EGR + A I+ + G Y +
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C ++ + +++ G P + + + C +G LL + GL
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP 480
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D++ + L+ + +++ A +L + + S + TY ++DG F ++++A+ +F
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 384 DYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + SS ++ +++S + +A +M+K G P+ TY I G
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 163/381 (42%), Gaps = 19/381 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y +G + + + +M+ G P L+ R ++ A+ L+ M+ G+SPN
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 82 KFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + K + L L ++SG + SS YN++I +SK A +
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + L P TY+S +DG R +T ++ +I M ++ P + + +I L
Sbjct: 577 KMVK-QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS--LIYGLC 633
Query: 197 DMGKTYAAEM--IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G+ AEM + R E DT ++K L EGR EA Q+ + ++G+
Sbjct: 634 QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE--- 311
+ Y A + CK + E + + G+ + LS + A C K +EE
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGF---QLHLSDYKALICALCKENFIEEAQC 750
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ +L+K D + L++ + D + L +E +L+ TY +L L
Sbjct: 751 IFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL- 809
Query: 372 KDGRMEEAVRIFDYMKELKVV 392
++ A++I ++L +V
Sbjct: 810 --SALDCAIKIPQISQQLGIV 828
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 35/271 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y + D L ++ M G +P+ N ++ + N I A G MV+ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ PN T++ LCR+G+ G AF +E
Sbjct: 583 LLPNVITYTSFIDGLCRNGR------------------------------TGLAFKIFHE 612
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLLPKHFLSGNDYVIQKL 195
M RN P TYSS++ G + + E ++ ++ + P + +++ L
Sbjct: 613 M-EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN--VDTYTTLVKGL 669
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+ Y A+ + + ++ ++ +L K +V+ A+ I++ + G +
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
SDY A + LCKE+ EE + + ++E+ +
Sbjct: 730 SDYKALICALCKENFIEEAQCIFQTMLEKHW 760
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 181/399 (45%), Gaps = 27/399 (6%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSAC--NALLDALYR 59
I SC + A S+V+D + G D + + +G ++AC N+LLD+ R
Sbjct: 139 IASCPASVTPLSA-SVVVDGFCKSGSVDDAHGLLDELPRHGV--GLNACCYNSLLDSYTR 195
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----M 114
Q + L M GV P T++++ L R+G V + D +V
Sbjct: 196 QRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYF 255
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y+ VI+ Y + G+ A + +E C G + P TY ++++G + + E ++ ++ M
Sbjct: 256 YSAVINAYCRGGNVRRASEVFDE-CVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM 314
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK-------IELQDDTCGCML 227
+ + G++ ++ + M Y + ++A + K IEL T +
Sbjct: 315 QLRGV-------GHNQIV--FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLA 365
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L + R+++A ++ H+++E+G+ Y +++ KE E L RD+ +G
Sbjct: 366 CGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSR 425
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + G +E E + KGL+ D + + L+ +C N ++D A+ L
Sbjct: 426 PSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRL 485
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+++ +V Y L+ GL K+GR EEA +++D M
Sbjct: 486 FEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDM 524
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 160/378 (42%), Gaps = 31/378 (8%)
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAF 132
V+P + S+V C+SG + GLLD G+ ++ YN ++D Y+++ + A
Sbjct: 146 VTP--LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVA 203
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYV 191
L EM N R + P TY+ ++DG R + + M K + +F S V
Sbjct: 204 GLLKEMEN-RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSA---V 259
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I G A +F +E + T G ++ K G+++ A + + RG+
Sbjct: 260 INAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGV 319
Query: 252 TVRDSDYYAFVNVLCKEHQPE---------EVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ ++ C+ E E G+ D+ + C + C
Sbjct: 320 GHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGL---------CR 370
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+ ++ ++LL + +KG+ + ++L+ + + +A L +E V T
Sbjct: 371 VNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVT 430
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
Y+V++DG K+G + EA R M++ +V ++ +V C ++ A++ +EM
Sbjct: 431 YNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMK 490
Query: 422 KMGHKPDEATYKQVISGF 439
G KP+ Y ++SG
Sbjct: 491 HRGTKPNVVAYTALVSGL 508
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 129/299 (43%), Gaps = 21/299 (7%)
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---------DYVIQKLSDMGKTY 202
S ++DG + K+ D GL+ E LP+H + N Y Q+ D
Sbjct: 152 SVVVDG---FCKSGSVDDAHGLLDE---LPRHGVGLNACCYNSLLDSYTRQRNDD----- 200
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A + K + +E T ++ LS+ G + + +Y + + + Y A +
Sbjct: 201 AVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVI 260
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N C+ + + V G P + C G+ + E LL+ + +G+
Sbjct: 261 NAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVG 320
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ +++++ YC + ++KA+ + +EK+ LD+ TY+ L GL + RME+A ++
Sbjct: 321 HNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKL 380
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
M E V + S+ ++S ++ +A + +M G +P TY +I G++
Sbjct: 381 LHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYI 439
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----D 106
N ++D R + A + M + G+ + +T++ +A LCR + E LL +
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386
Query: 107 SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G+ + V Y +I ++K+GD A +M G+ P TY+ ++DG +
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDM-EGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++R M +K L+P + ++ GK A +F+ +
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAG--LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTA 503
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ L+KEGR +EA Q+Y + G+T D+ Y V L
Sbjct: 504 LVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 181/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A N ++D +++ ++ A L+ MV+ G+ P+ T++ V
Sbjct: 216 DLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVH 275
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM ++
Sbjct: 276 ALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSIL 334
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P T S ++ +Y K + + + M K P F + N Y + L DM
Sbjct: 335 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD- 393
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 394 -----LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 448
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G P + + C G + +EL+S +++ G+
Sbjct: 449 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 508
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD SS++ C ++ A + + D Y +L+DG G+ME+A+R
Sbjct: 509 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 568
Query: 382 IFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 182/432 (42%), Gaps = 34/432 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G++ + +++L+ Y+ KG +D +++ +M G P N L+ A +
Sbjct: 366 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 425
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A ++ M GV P+ T+ V LCR GK + + + +++
Sbjct: 426 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-----------------EKFNQM 468
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A D+ C L GF T+ S+L + + I +M L F
Sbjct: 469 IDQGVAPDKYAYNC----LIQGFCTHGSLL---------KAKELISEIMNNGMHLDIVFF 515
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I L +G+ A+ IF + + ++ G++++A++++
Sbjct: 516 SS---IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI Y VN CK + +E L R++++RG P + S + G+
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ +D + ++ NR D+AI L ++ + +++ T +
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++DG+F+ R+EEA +F + ++V + ++ I+++ L + +A M G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Query: 425 HKPDEATYKQVI 436
+P+ V+
Sbjct: 753 CEPNSRLLNHVV 764
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 165/371 (44%), Gaps = 46/371 (12%)
Query: 77 GVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG----IYSSVMYNLVIDFYSKKGDFG 129
G P+ F++S++ + LC +SG+ + +L ++ G + V YN VID + K+GD
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A D EM R + P TY+S++ + + ++ + MV K++LP ++ N
Sbjct: 250 KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN- 307
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I S G+ A +FK I T ++ +L K G++KEA ++ ++ +
Sbjct: 308 -LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 366
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G ++ D +++ +++ GY KG ++
Sbjct: 367 G---QNPDVFSY------------------NIMLNGY--------------ATKGCLVDM 391
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D + + L++ Y + +DKA+ + ++ DV TY ++
Sbjct: 392 TDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAA 451
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + G+M++A+ F+ M + V ++ ++ C L KA + E++ G D
Sbjct: 452 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 511
Query: 429 EATYKQVISGF 439
+ +I+
Sbjct: 512 IVFFSSIINNL 522
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 105 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANH 164
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K CD+ Q D
Sbjct: 165 LLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 224
Query: 222 --TC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C ++ KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V + +P + + G+WKE + + +L D S LM
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL---------------------DGLF 371
C +I +A + + + DV +Y+++L DG+
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404
Query: 372 KD--------------GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D G +++A+ IF+ M++ V ++ V++ LC + ++ AM+
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGF 487
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/410 (17%), Positives = 166/410 (40%), Gaps = 43/410 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY------------------- 110
+ GV+P+K+ ++ + Q C G E++ ++++G++
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Query: 111 -----------------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+V+Y++++D Y G A + M + + P Y +
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVVYCT 587
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + + + M+++ + P L +I L G+T A+M F +
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYS--IIIDGLFQAGRTVPAKMKFHEMTE 645
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I + T +L+ L K EAI ++ + + + ++ + + + EE
Sbjct: 646 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 705
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + +P + S + + +G +E E++ S++ + G +S + ++
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 765
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 766 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 186/430 (43%), Gaps = 46/430 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V Y+H G D +++ M P ++A N +L AL ++ ++ A L G +++
Sbjct: 157 TVVCGLYAH-GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 215
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G+S N FT+++ + LC +G+ + L+D + V YN +I KK A
Sbjct: 216 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 275
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L M N L F TY++I+DG + + + ++ V K +P
Sbjct: 276 MHYLRRMMNQGCLPDDF-TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV------- 327
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
TY + ++ L EG V+ A+++++ +GI
Sbjct: 328 ---------TYCS---------------------LINGLCAEGDVERALELFNEAQAKGI 357
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + V LC + ++ ++ E G P + + C G +
Sbjct: 358 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 417
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+++ + KG L D F ++L++ YC ++D A+ L ++ + + D TY+ +L+GL
Sbjct: 418 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 477
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G++ E F M LK + ++ I++ C ++ +A K +M + G PD
Sbjct: 478 KAGKVNEVNETFQEMI-LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 536
Query: 430 ATYKQVISGF 439
++ +I GF
Sbjct: 537 VSFNTLIYGF 546
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 41/420 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ G D ++ + M ++ PA A NA++DAL A +Y M+ GVSP+
Sbjct: 61 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 120
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
T ++ + C + + + L LL + +
Sbjct: 121 LHTHTIRLRSFCLTARPHIALRLLRALPHR------------------------------ 150
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
G Y +++ G + T + ++ M+ + P L+ + V+ L G
Sbjct: 151 -----GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPN--LAAFNKVLHALCKRGDV 203
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYA 260
A ++ + + + T ++ L + GR+ EA+++ + R V D Y
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL--VDGMRAYAVPDVVTYNT 261
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK+ P+E LR ++ +G +P + + C +E ELL + KG
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D SL+ C+ +++A+ L + + D+ Y+ L+ GL G + A+
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + M E ++ IV++ LC + + A ++ + G+ PD T+ +I G+
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 178/420 (42%), Gaps = 10/420 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + + + MR Y VP V N L+ L +++ + A M+ G P+ FT+
Sbjct: 236 GRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 294
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + C+ + LL ++ V Y +I+ +GD A + NE
Sbjct: 295 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQ 353
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ + P Y+S++ G + +++ M E+ P + + VI L MG
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD--IQTYNIVINGLCKMGN 411
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A ++ A + T ++ K ++ A+Q+ + E GI Y +
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N LCK + EV ++++ +G P + + + + C K +E +++ + +G
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D+ ++L+ +C N ++ A L K+E+ S T++ L+ M A
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591
Query: 381 RIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+IFD M + S ++ +++ C + +A + EM+K G P +T+ +VI+
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 164/383 (42%), Gaps = 8/383 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y + + E+ + GFVP +L++ L + ++ A L+
Sbjct: 295 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 354
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ P+ ++ + + LC G +V+ + + G + + YN+VI+ K G+
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +N+ + P T+++++DG + K + + ++V M E + P +
Sbjct: 415 ATVVMNDAIM-KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS-- 471
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ L GK F+ + T +++ + +++EA ++ +S+ G
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + + C+ E L + + E+GY A + + + GK E
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++ +L KG DS+ L++ C +D+A +++ K ++T+ +++ L
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651
Query: 371 FKDGRMEEAVRIFDYMKELKVVS 393
+ R+ +AV I M ++ VV
Sbjct: 652 TVNHRVFQAVGIIHIMVKIGVVP 674
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 149/367 (40%), Gaps = 42/367 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++V++ G D V + G++P V N L+D ++ ++
Sbjct: 390 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 449
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M G++P+ T++ V LC++GK V + +++ K
Sbjct: 450 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV---------NETFQEMIL-----K 495
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G C+ P TY+ +++ R K E + +++ M ++ L P +
Sbjct: 496 G------------CH-----PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD-AV 537
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S N +I G A ++F++ ++ DT ++ A S + + A +I+
Sbjct: 538 SFNT-LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 596
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +G Y ++ CK + L +++++G+IP R + S +
Sbjct: 597 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 656
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KGSLDVATY 363
+ ++ ++ G++ + +++ N + A I +E L KG + TY
Sbjct: 657 VFQAVGIIHIMVKIGVVPE--VVDTIL-----NADKKEIAAPKILVEDLMKKGHISYPTY 709
Query: 364 DVLLDGL 370
+VL +G+
Sbjct: 710 EVLHEGV 716
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 189/438 (43%), Gaps = 23/438 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++L+C + +GL V + G++P + L+ L ++ I A+ L+ M
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYS------SVMYNLVIDFY 122
+ G +PN T+ + + LCR+G + L L DS +Y + Y+++ID
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K A D EM + +TP +Y+S++ E + R+ MV + + P
Sbjct: 253 CKDRREDEARDLFEEM-KVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPN 303
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I L GK A+ + + I T +++ G + A ++
Sbjct: 304 --VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + +G Y +N CK + EE L +++ G P +
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
GK + ++L + G+ D + + C N + +A+ L K++ LD+
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 481
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
++ L+DGL K G++E A +F+ + + ++ ++ I++ C ++ KA +M
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 541
Query: 422 KMGHKPDEATYKQVISGF 439
K G PD+ TY +I GF
Sbjct: 542 KNGCTPDKITYATLIRGF 559
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 153/362 (42%), Gaps = 57/362 (15%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+++ M+V G P V + +L+ A L+ MV GV PN T++++ +L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 314
Query: 93 CRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ GK +++ ++ GI +++ YN +I+ + GD +A + M + P
Sbjct: 315 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM-PSKGCEPD 373
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
Y+ +++G + K E + ++ M++ + K D+ KTY
Sbjct: 374 VICYTVLINGYCKTSKVEEAMKLYNGMLQ---------------VGKRPDV-KTY----- 412
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
G +L L + G+V +A +++ ++ GI Y F+N LCK
Sbjct: 413 ----------------GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 456
Query: 268 E---HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ E+ L+ + I C + + C GK + EL + + L D
Sbjct: 457 NGCLFEAMELFNKLKSYNIKLDIEC---FNCLIDGLCKAGKLETAWELFEKLPQEELQPD 513
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++ +C Q+ KA L K+EK + D TY L+ G F+ ++E+ V +
Sbjct: 514 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573
Query: 385 YM 386
M
Sbjct: 574 MM 575
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 188/445 (42%), Gaps = 18/445 (4%)
Query: 7 GRDSQS--DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
R+S+ + + +++ +S G + +E+ M G VP N ++ +
Sbjct: 128 NRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVE 187
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVI 119
A L+ M GV P+ ++ ++ + C+ G + + +L+ G + + + L+I
Sbjct: 188 YAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLII 247
Query: 120 DFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+S KG A F RL +M L P ++ +++G + + + ++ MV
Sbjct: 248 SRFSGKGYTTRALWYFRRLVDM----GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVG 303
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGR 235
K P + + +I L G T A +F K E + T M+ +E +
Sbjct: 304 KGWKPNVYTHTS--LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDK 361
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ A + + E+G+ + Y ++ CK E L+ + G+ P +
Sbjct: 362 LNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNA 421
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
V C +G+ +E ++L GL D F + LM +C I +A+AL K+ K+
Sbjct: 422 IVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIG 481
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
D+ +Y L+ ++ RM+E+ F+ + ++ ++ ++ ++ C L AM
Sbjct: 482 IQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAM 541
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
K + G PD TY +ISG
Sbjct: 542 KFFHRLSDHGCAPDSITYGAIISGL 566
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 167/402 (41%), Gaps = 29/402 (7%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R Q D++S +++ Y G ++ + +M GFV + ++ +
Sbjct: 199 RGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTR 258
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVID 120
A + +V G+ PN ++ + + LC+ G FE++ ++ G +V + +ID
Sbjct: 259 ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 318
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
KKG AF ++ N P TY++++ G R +K ++ ++ M E+ L+
Sbjct: 319 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378
Query: 181 PK----------HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
P H +GN ++ D+ ++E C T ++ L
Sbjct: 379 PNTNTYTTLIDGHCKAGN---FERAYDLMNLMSSEGFSPNLC---------TYNAIVNGL 426
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K GRV+EA ++ + G+ Y ++ CK+ + L +++ G P
Sbjct: 427 CKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDI 486
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ +A C + + KE E + G++ + +S++ YC + A+ +
Sbjct: 487 HSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHR 546
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ + D TY ++ GL K + +EA ++D M E +V
Sbjct: 547 LSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLV 588
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 132/295 (44%), Gaps = 24/295 (8%)
Query: 20 DCYSHKGLFMDGL-------EVYRM----MRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+ Y+H L +DGL + +R+ +R P V A++ R++++ A
Sbjct: 309 NVYTHTSL-IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEM 367
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIYSSVM--YNLVIDFYS 123
L M G+ PN T++ + C++G FE ++ L+ S +S + YN +++
Sbjct: 368 LLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLC 427
Query: 124 KKGDFGAAFDRLNE-MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K+G A+ L + NG L P TY+ ++ + E + + M++ + P
Sbjct: 428 KRGRVQEAYKMLEDGFQNG--LKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +I + +EM F+ A I + T M+ +EG + A++
Sbjct: 486 --IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKF 543
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+H +S+ G Y A ++ LCK+ + +E L ++E+G +PC E++R
Sbjct: 544 FHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPC--EVTRIT 596
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++ + ++D + G F ++ +M GF P + NA+++ L ++ ++
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI------YSSVM- 114
A + ++G+ P+KFT++++ C+ L L + GI Y++++
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494
Query: 115 -----------------------------YNLVIDFYSKKGDFGAA---FDRLNEMCNGR 142
Y +I Y ++G+ A F RL++
Sbjct: 495 VFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSD----H 550
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
P TY +I+ G + K + + + M+EK L+P
Sbjct: 551 GCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 187/457 (40%), Gaps = 44/457 (9%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + + MM G+VP + + N LL ++ + A L M G+ + T
Sbjct: 188 QGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCT 247
Query: 85 WSLVAQILCR---SGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++ LCR S + +VL + + + + V YN +I+ + K+G G A NEM
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI 307
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
NL+P TY+ +++G E + R++ +M + P G ++ L
Sbjct: 308 E-LNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGT--LLNGLYKSA 364
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A I +R C + L + M+ L + G + EA Q+ + + G+ +
Sbjct: 365 KFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFS 424
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N CK + ++ + G++P + S + + C G E + +A+
Sbjct: 425 VLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLN 484
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G D+F C+SL+ C N ++ +A I ++ + T+D +++G G A
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544
Query: 380 VRIFDYM-----------------------------KELK-------VVSSSSFVIVVSR 403
+FD M K LK V + S+ ++
Sbjct: 545 FSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ L +A++ +EM++ PD TY ++SG +
Sbjct: 605 ISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 185/446 (41%), Gaps = 20/446 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G+++ + + ++ G ++ E + G VP + +++ +
Sbjct: 484 NGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSG 543
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVID 120
A ++ M+ G P+ FT+ + ++LC+ F LL ++ YN +I
Sbjct: 544 AFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIV 603
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
SK G+ A EM N+ P TY+ IL G R + + +G +++K++L
Sbjct: 604 EISKSGNLLEAVRLFEEMIQN-NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEIL 662
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ + + I L G++ AA +FK ++ + L + S+ G+V A
Sbjct: 663 TLNSIVYTCF-IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSAS 721
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEH---QPEEVCGLLRDVVER-GYIPCAMELSRF 296
+ + + + + N+L + Q C L +++ R G+ P +
Sbjct: 722 SLISKTRNKNVIPNLTTF----NILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSL 777
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C G + ++L + + +D + L+ C +DK I L +E +
Sbjct: 778 ILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRV 837
Query: 357 SLDVATYDVLLDGLFKDGRMEEA---VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKA 413
SLD T + D L + RM V + + +K+ + +S + ++ R+C + +++ A
Sbjct: 838 SLDKDTQKAVTDVLVR--RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
K D+M+ +G D+A ++ G
Sbjct: 896 FKLKDQMVALGISLDDAAECAMVRGL 921
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
TC ++ ++ K R + + + S + ++VLC + + ++ +L +
Sbjct: 142 TCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMM 201
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
GY+P + + ++ C KG++K L+ + KG+ D + ++ C N +
Sbjct: 202 ERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRS 261
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
+ + K+ + + +Y+ L++G K+G++ A R+F+ M EL + + ++ I+
Sbjct: 262 AQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNIL 321
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C +A++ D M +P+E T +++G
Sbjct: 322 INGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGL 360
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 142/363 (39%), Gaps = 45/363 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
AL+ + D YS G + R +P ++ N LL R +I LY M
Sbjct: 703 ALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLM 762
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
R G PN+ T+ + LC G E+ + +L +S + +N++I + D
Sbjct: 763 RRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDL 822
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
D LT + LD + + V+D +V MV + +F+ +
Sbjct: 823 DKVID----------LTHNMEVFRVSLD---KDTQKAVTDVLVRRMVSQN----YFVFMH 865
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ + + K Y M KR C + G ++ A ++ +
Sbjct: 866 EMLKKGFIPTSKQYCTMM--KRMC-------------------RVGDIQGAFKLKDQMVA 904
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI++ D+ A V L + EE +L+ ++ IP + + C K +KE
Sbjct: 905 LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLL 367
L + + LD + L+ C+N + A+ + +I++ KG L ++ TY VL+
Sbjct: 965 AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQ-KGLLPNMTTYRVLV 1023
Query: 368 DGL 370
+
Sbjct: 1024 SAI 1026
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 192/441 (43%), Gaps = 13/441 (2%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
SC+G + ++ +G D V R G V A N L+ R +
Sbjct: 68 SCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL 127
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLV 118
A L G+M V+P+ +T++ + ++LC G+ L LLD + + V Y ++
Sbjct: 128 DAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVL 184
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
++ + F A L+EM + TP TY+ I++G R + + + ++ +
Sbjct: 185 LEAMCRNSGFEQAMAVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P +++ L + E +F ++ + T +++ + G V+
Sbjct: 244 FQPDTV--SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 301
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AIQ+ ++E G + +N +CK+ + ++ LL D+ G P + + +
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C +W + +ELL+ ++ + ++ + C I++AI L ++ + ++
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
V TY+ L++G G ++ A+ +F M ++ ++ +++ LC+ + L A +
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCKP--NTITYTTLLTGLCNAERLDGAAELVA 479
Query: 419 EMLKMGHKPDEATYKQVISGF 439
EML+ P+ T+ ++S F
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFF 500
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 191/440 (43%), Gaps = 32/440 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D E+ + YGF P + LL L L+ M+
Sbjct: 217 NVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L+ ++ + N+VI+ K+G
Sbjct: 277 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDD 336
Query: 131 AFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
AF LN+M CN P +Y+++L G R E+ + + ++ MV P ++
Sbjct: 337 AFKLLNDMGSYGCN-----PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE-VT 390
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
N ++ L G A M+ ++ + + T ++ +G + A++++ +
Sbjct: 391 FNTFIC-ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 449
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ T+ Y + LC + + L+ +++ P + + V+ C KG
Sbjct: 450 PCKPNTI---TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFL 506
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG------SLDV 360
+E EL+ +++ G C +L+ Y I K + +E L G S DV
Sbjct: 507 EEAIELVEQMMEHG------CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDV 560
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T+ ++ L K+ R+EEAV++F ++++ + + + ++ LC E+ A+
Sbjct: 561 ITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAY 620
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G P+E+TY +I G
Sbjct: 621 MVSNGCMPNESTYIILIEGL 640
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 146/378 (38%), Gaps = 46/378 (12%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++V++ +G D ++ M YG P + +L L R A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDF 121
L MVR+ PN+ T++ ILC+ G E + L++ V YN +++
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ +G +A + M P TY+++L G E+ + + +V M+ P
Sbjct: 433 FCVQGHIDSALELFRSM----PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP 488
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
T ++ ++G ++EAI+
Sbjct: 489 NVV-------------------------------------TFNVLVSFFCQKGFLEEAIE 511
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + E G T Y ++ + K+ E+ LL +V +G P + S +
Sbjct: 512 LVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILS 571
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ + +E +L V D G+ + + ++ C +ID AI + + +
Sbjct: 572 KEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNES 631
Query: 362 TYDVLLDGLFKDGRMEEA 379
TY +L++GL +G ++EA
Sbjct: 632 TYIILIEGLAHEGLLKEA 649
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 189/448 (42%), Gaps = 44/448 (9%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++ + G P+ NA++DAL + N + LA + M D P++FT++++ +
Sbjct: 203 EIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGV 262
Query: 93 CRSGKFEVVLGLLDS----GIYSSVM-YNLVID--FYSKKGDFGAAFDRLNEMCNGRNLT 145
CRSG + L L+ G +V Y ++ID F +KK D AF R+ E R ++
Sbjct: 263 CRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVD--EAF-RVLETMKARKVS 319
Query: 146 PGFSTYSSILDGARR--------------YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
P +T S + G R E+ V R+ + L K+ +
Sbjct: 320 PSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGAL 379
Query: 192 IQKLSDMGK-----TYAAEM--------------IFKRACDEKIELQDDTCGCMLKALSK 232
++K +G T+ M I R ++ ++ T ++KAL
Sbjct: 380 LKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYM 439
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G+V E ++ + + G+ Y ++ CK ++ +++ +G P +
Sbjct: 440 AGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVT 499
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C G+ + +LL +L+ G D F SS+++ C +QI+ A+ ++
Sbjct: 500 FNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMV 559
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELR 411
S + TY++L+ L G + ++++ M+ + SF ++ C + ++
Sbjct: 560 MWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVE 619
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
A K ML +G PD TY I F
Sbjct: 620 DAKKLFSSMLSLGLIPDNYTYVAFIKVF 647
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 121/278 (43%), Gaps = 8/278 (2%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS 111
AL+ ALY ++ + + MV+DG+ N ++++V C++ + Y
Sbjct: 432 ALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYK 491
Query: 112 SVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
+ NLV ID Y K G+ + D L M P T+SSI+DG R ++ E
Sbjct: 492 GIPPNLVTFNTLIDGYCKGGEICKSRDLL-VMLLEHGFKPDIFTFSSIIDGLCRAKQIED 550
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ MV L P + +I L +G + + ++ + I + +
Sbjct: 551 ALGCFSEMVMWGLSPNAVTY--NILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNAL 608
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+++ + G+V++A +++ + G+ + Y AF+ V C+ + E L + G
Sbjct: 609 IQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGC 668
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+P + + + + + +++ +++ + G+L++
Sbjct: 669 MPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVN 706
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 9/263 (3%)
Query: 131 AFDRLNEMCN------GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
FD LNE+CN + + GFSTY +++ K + MV+ LL
Sbjct: 405 GFD-LNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCN-- 461
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + VI A FK + I T ++ K G + ++ +
Sbjct: 462 VCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLV 521
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++ E G + + ++ LC+ Q E+ G ++V G P A+ + + S C G
Sbjct: 522 MLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIG 581
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+LL + G+ D F ++L++ +C +++ A L + L D TY
Sbjct: 582 DVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYV 641
Query: 365 VLLDGLFKDGRMEEAVRIFDYMK 387
+ + GR EA +F M+
Sbjct: 642 AFIKVFCQSGRFNEAKELFLSME 664
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+++ R M+ G P V + NAL+ + R ++ A L+ +M+ G+ P+ +T+ ++
Sbjct: 587 MKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKV 646
Query: 92 LCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C+SG+F E+ L + +G + S N+++D K+ F AA ++ + C+ +
Sbjct: 647 FCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA-QKIAKTCSEWGILV 705
Query: 147 GFSTYS 152
F+ S
Sbjct: 706 NFAAIS 711
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L + M ++G P N L+ +L ++ + L M DG++P+ F+++ +
Sbjct: 550 DALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALI 609
Query: 90 QILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
Q CR GK E L S I + Y I + + G F A + M
Sbjct: 610 QSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSM-EANGC 668
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
P T + ILD + ++ E + +I E +L
Sbjct: 669 MPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGIL 704
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 184/428 (42%), Gaps = 36/428 (8%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ N LL + R+N + L S LY MV VSP +T++L+ +LC SG E L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 105 LDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
D + + +++ Y + G + L +M + P Y++++
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQM-RTMGILPNNVLYNTLISSFC 228
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK-RACDEKIEL 218
+ KT ++++V M E L+P H + N I L GK A IF+ DE++ L
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVP-HVETFNSR-ISALCGSGKILEASRIFRDMQIDEELGL 286
Query: 219 QDD---TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ML KEG ++EA + + + Y ++ L + + E
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+L++++ G P + + C G + L+ ++ G+L D+ S+L+ Y
Sbjct: 347 IVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSS 394
CS ++ +A L ++ S + T +VLL L+K+GR+ EA + M E V +
Sbjct: 407 CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH-----------------------KPDEAT 431
+ I+++ LC+ +L KA++ + M G PD T
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVT 526
Query: 432 YKQVISGF 439
Y +ISG
Sbjct: 527 YSTIISGL 534
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 177/431 (41%), Gaps = 59/431 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +L Y KG + + M P CN LL +L+++ I A L M
Sbjct: 400 STLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNE 459
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G + T +++ LC +G+ + + +++ G+++ L G+ G +F L
Sbjct: 460 KGYGVDTVTCNIIINALCNNGQLDKAIEIVN-GMWTHGSAAL--------GNLGNSFIGL 510
Query: 136 -NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
++ +G+ TP TYS+I+ G + + + + + M+ K L P D I
Sbjct: 511 VDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQP-------DSAIY- 562
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
DT + + +EG++ A Q+ + +RG
Sbjct: 563 --------------------------DT---FIHSFCREGKISSAFQVLKDMEKRGCNKT 593
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + + L ++Q E+ GL+ ++ E+G P + + C G+ + +L
Sbjct: 594 LQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLD 653
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV-----ATYDVLLDG 369
+L KG+ + L++ +C KA E + +L+V A Y ++ +
Sbjct: 654 EMLQKGISPNISSFRILIKAFC------KACDFKASHEVFEIALNVCGHKEALYTLMFNE 707
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L G++ EA +F+ + + + + ++ RLC ++L A ++ G++ D
Sbjct: 708 LLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFD 767
Query: 429 EATYKQVISGF 439
A++ VI GF
Sbjct: 768 PASFMPVIDGF 778
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 173/410 (42%), Gaps = 21/410 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL--VAQILCRSGKF---- 98
P ALL+ + +LA L+ ++ +S N + S+ +++IL RS F
Sbjct: 3 PTTKLTKALLNNAHNP---KLAWHLFKRILSLPISSNHRSQSIPIISRILIRSKMFNELD 59
Query: 99 ---EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSI 154
+++L S + NLV +K G F A + N P Y+ +
Sbjct: 60 DLHQLLLNSPSLESSDSSLENLVT-VLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVL 118
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
L R + E+ + MV ++ P+ + + +I L D G A +F +
Sbjct: 119 LKSCIRENRVELVSWLYKDMVLARVSPEAYTF--NLLIGLLCDSGHLEDARELFDKMPAR 176
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
E + T G +++ + G + +++ + GI + Y ++ CKE + +
Sbjct: 177 GCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDA 236
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV-LDK--GLLLDSFCCSSL 331
L+ + E G +P + +++ CG GK E + + +D+ GL + L
Sbjct: 237 EKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKL 296
Query: 332 MEY-YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
M +C +++A L +++ +++ +Y++ L GL ++G++ EA + M +
Sbjct: 297 MLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIG 356
Query: 391 VVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ IV+ LC L A M++ G PD TY ++ G+
Sbjct: 357 IEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 176/423 (41%), Gaps = 39/423 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++++ + ++ S LS ++ Y+ + D ++V+ MR++ P + AC LL++L +
Sbjct: 115 LVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKD 174
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-Y 115
+ +Y MV+ GV PN + ++ + +SG E LL+ G+ + Y
Sbjct: 175 GVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTY 234
Query: 116 NLVIDFYSKKGDFGAAFDRLNEM-------------------CN-GR------------N 143
N ++ Y KKG A N M C GR N
Sbjct: 235 NTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKN 294
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
TP TY++++DG + + E + ++ LM K L P + + +++KL G+
Sbjct: 295 ATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPG--VVTYNSILRKLCQDGRIRD 352
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A + + K++ + TC ++ A K G +K A++ + + E G+ Y A ++
Sbjct: 353 ANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIH 412
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
CK ++ E L+ +++ G+ P S V K V L L +G+ L
Sbjct: 413 GFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICL 472
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D +L+ C +I A L +E S + Y + + G + A +
Sbjct: 473 DVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSML 532
Query: 384 DYM 386
+ M
Sbjct: 533 EEM 535
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 160 RYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
Y K++++ + + + +L K L ++ L G T+ I+KR +
Sbjct: 135 HYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVP 194
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
C+ A SK G V+ A Q+ + + +G+ Y +++ CK+ E +
Sbjct: 195 NIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQ 254
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ G + + + C +G+ +E + S + K + ++L++ YC
Sbjct: 255 NRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKT 312
Query: 339 RQIDKAIALHIKIEKLKGSLD-VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
++++A+ + K+ + KG V TY+ +L L +DGR+ +A ++ + M E K+ + + +
Sbjct: 313 NELEEALKM-CKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNIT 371
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C + +L+ A+K ++ML+ G KPD TYK +I GF
Sbjct: 372 CNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGF 414
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 138/300 (46%), Gaps = 13/300 (4%)
Query: 141 GRNLTPGFSTYSSILDGARRYEKT-EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS--D 197
G L+ F + LD Y + + S ++ ++ E K HF + +V++K++ D
Sbjct: 51 GYGLSHSFPFFK-WLDSIPHYSHSLQCSWAMIHILTEHK----HFKTA-QHVLEKIAHKD 104
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+ + R D + E+ ++ +K ++AIQ++ + +
Sbjct: 105 FLSSPSVLSTLVRTHDNQ-EVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHA 163
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK-GKWKEVEELLSAV 316
+N L K+ V + + +V+ G +P + + + C K G + E+LL+ +
Sbjct: 164 CTVLLNSLLKDGVTHMVWKIYKRMVQVGVVP-NIYIYNCLFHACSKSGDVERAEQLLNEM 222
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
KG+L D F ++L+ YC +A+++ ++E+ +LD+ +Y+ L+ G K+GRM
Sbjct: 223 DVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRM 282
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA+R+F +K + ++ ++ C EL +A+K M G P TY ++
Sbjct: 283 REAMRMFSEIKN-ATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSIL 341
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGL 104
CN L++A + +++ A M+ G+ P+ FT+ + C++ + E++ +
Sbjct: 371 TCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSM 430
Query: 105 LDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
LD+G S Y+ ++D Y+KK + A +E + R + S Y +++ + + E+
Sbjct: 431 LDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLS-RGICLDVSVYRALIRSSCKVER 489
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS----DMGKTYAAEMIFKRACDEKIELQ 219
+ ++R+ M K +SG + ++ ++G AA + + ++ +
Sbjct: 490 IQCAERLFYHMEGKG------ISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRLMIT 543
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
C + + E +V + ++ + +RG+ R++
Sbjct: 544 VKLYRCFSTSDANENKVSQI--FWNHVMDRGLMSRNT 578
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 186/430 (43%), Gaps = 46/430 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V Y+H G D +++ M P ++A N +L AL ++ ++ A L G +++
Sbjct: 156 TVVCGLYAH-GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 214
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G+S N FT+++ + LC +G+ + L+D + V YN +I KK A
Sbjct: 215 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 274
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L M N L F TY++I+DG + + + ++ V K +P
Sbjct: 275 MHYLRRMMNQGCLPDDF-TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV------- 326
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
TY + ++ L EG V+ A+++++ +GI
Sbjct: 327 ---------TYCS---------------------LINGLCAEGDVERALELFNEAQAKGI 356
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + V LC + ++ ++ E G P + + C G +
Sbjct: 357 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 416
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+++ + KG L D F ++L++ YC ++D A+ L ++ + + D TY+ +L+GL
Sbjct: 417 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 476
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G++ E F M LK + ++ I++ C ++ +A K +M + G PD
Sbjct: 477 KAGKVNEVNETFQEMI-LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 535
Query: 430 ATYKQVISGF 439
++ +I GF
Sbjct: 536 VSFNTLIYGF 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 41/420 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ G D ++ + M ++ PA A NA++DAL A +Y M+ GVSP+
Sbjct: 60 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 119
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
T ++ + C + + + L LL + +
Sbjct: 120 LHTHTIRLRSFCLTARPHIALRLLRALPHR------------------------------ 149
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
G Y +++ G + T + ++ M+ + P L+ + V+ L G
Sbjct: 150 -----GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPN--LAAFNKVLHALCKRGDV 202
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYA 260
A ++ + + + T ++ L + GR+ EA+++ + R V D Y
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL--VDGMRAYAVPDVVTYNT 260
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK+ P+E LR ++ +G +P + + C +E ELL + KG
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D SL+ C+ +++A+ L + + D+ Y+ L+ GL G + A+
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + M E ++ IV++ LC + + A ++ + G+ PD T+ +I G+
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 178/420 (42%), Gaps = 10/420 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + + + MR Y VP V N L+ L +++ + A M+ G P+ FT+
Sbjct: 235 GRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 293
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + C+ + LL ++ V Y +I+ +GD A + NE
Sbjct: 294 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQ 352
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ + P Y+S++ G + +++ M E+ P + + VI L MG
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD--IQTYNIVINGLCKMGN 410
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A ++ A + T ++ K ++ A+Q+ + E GI Y +
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N LCK + EV ++++ +G P + + + + C K +E +++ + +G
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D+ ++L+ +C N ++ A L K+E+ S T++ L+ M A
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590
Query: 381 RIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+IFD M + S ++ +++ C + +A + EM+K G P +T+ +VI+
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 164/383 (42%), Gaps = 8/383 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y + + E+ + GFVP +L++ L + ++ A L+
Sbjct: 294 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 353
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ P+ ++ + + LC G +V+ + + G + + YN+VI+ K G+
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +N+ + P T+++++DG + K + + ++V M E + P +
Sbjct: 414 ATVVMNDAIM-KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS-- 470
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ L GK F+ + T +++ + +++EA ++ +S+ G
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + + C+ E L + + E+GY A + + + GK E
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++ +L KG DS+ L++ C +D+A +++ K ++T+ +++ L
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650
Query: 371 FKDGRMEEAVRIFDYMKELKVVS 393
+ R+ +AV I M ++ VV
Sbjct: 651 TVNHRVFQAVGIIHIMVKIGVVP 673
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 149/367 (40%), Gaps = 42/367 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++V++ G D V + G++P V N L+D ++ ++
Sbjct: 389 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 448
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M G++P+ T++ V LC++GK V + +++ K
Sbjct: 449 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV---------NETFQEMIL-----K 494
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G C+ P TY+ +++ R K E + +++ M ++ L P +
Sbjct: 495 G------------CH-----PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD-AV 536
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S N +I G A ++F++ ++ DT ++ A S + + A +I+
Sbjct: 537 SFNT-LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 595
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +G Y ++ CK + L +++++G+IP R + S +
Sbjct: 596 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 655
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KGSLDVATY 363
+ ++ ++ G++ + +++ N + A I +E L KG + TY
Sbjct: 656 VFQAVGIIHIMVKIGVVPE--VVDTIL-----NADKKEIAAPKILVEDLMKKGHISYPTY 708
Query: 364 DVLLDGL 370
+VL +G+
Sbjct: 709 EVLHEGV 715
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 184/400 (46%), Gaps = 29/400 (7%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSAC--NALLDALYR 59
+ SC G + A S+V+D + G D + M +G ++AC N LLD R
Sbjct: 124 LASCPGCITPLSA-SVVVDGFCKAGRMDDARRLLDEMPRHGV--KLNACCYNPLLDTYTR 180
Query: 60 Q-NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV----- 113
Q N+ R+A L M GV P T++++ L +G V + D +V
Sbjct: 181 QKNDARVAEVLK-EMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVY 239
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y+ VI+ Y + G+ A + +E C G + P TY ++++G + + E ++ ++
Sbjct: 240 FYSAVINAYCRAGNVRRASEVFDE-CVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTD 298
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD-----EKIELQDD--TCGCM 226
M + + G++ +I + M Y + +A + E++ +Q D T +
Sbjct: 299 MQLRGV-------GHNQII--FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTL 349
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L + R+++A ++ H+++E G+ Y +++ KE E L RD+ +G
Sbjct: 350 ACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGS 409
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + + + G +E E + KGL+ D + ++L+ +C N ++D A+
Sbjct: 410 RPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALR 469
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L ++++ +V Y L+ GL K+GR EEA + +D M
Sbjct: 470 LFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 7/229 (3%)
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+E T ++ LS G + + ++ I + + Y A +N C+
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ + V G P + C G+ + E LL+ + +G+ + +++++ Y
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV---- 391
C + +DKA+ + +E++ LDV TY+ L GL + RME+A ++ M E V
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNY 378
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
VS ++ + + S+ + E R+ + +M G +P TY +I G++
Sbjct: 379 VSYTTLISIHSKEGDMVEARRLFR---DMEGKGSRPSVVTYNVMIDGYI 424
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 155/378 (41%), Gaps = 35/378 (9%)
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRL 135
+ S+V C++G+ + LLD V YN ++D Y+++ + + L
Sbjct: 132 TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191
Query: 136 NEMCNGRNLTPGFSTYSSILDG---ARRYEKTE-VSDRIVGLMVEKKLLPKHFLSGNDYV 191
EM +G + P TY+ ++DG A K E V D I V + +F S V
Sbjct: 192 KEMESG-GVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDV---YFYSA---V 244
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I G A +F IE + T G ++ K G+++ A + + RG+
Sbjct: 245 INAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGV 304
Query: 252 TVRDSDYYAFVNVLCKEHQPE---------EVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ ++ C+ + E G+ DV + C + C
Sbjct: 305 GHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGL---------CR 355
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+ ++ ++LL + + G+ + ++L+ + + +A L +E V T
Sbjct: 356 VNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVT 415
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y+V++DG K G + EA R M++ +V ++ +V C ++ A++ +EM
Sbjct: 416 YNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMK 475
Query: 422 KMGHKPDEATYKQVISGF 439
+ G KP+ Y +ISG
Sbjct: 476 QRGAKPNVVAYTALISGL 493
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 8/229 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----D 106
N ++D R + A + M R G+ + +T++ +A LCR + E LL +
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371
Query: 107 SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
+G+ S+ V Y +I +SK+GD A +M G+ P TY+ ++DG +
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDM-EGKGSRPSVVTYNVMIDGYIKSGSIR 430
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++R M +K L+P + ++ GK A +F+ +
Sbjct: 431 EAERFKKEMEKKGLVPDVYTYAA--LVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTA 488
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
++ L+KEGR +EA Q Y + G+T D+ Y V L + + +E+
Sbjct: 489 LISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDEI 537
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 132/298 (44%), Gaps = 8/298 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
+A+++A R +R AS ++ V +G+ PN+ T+ + C+ G+ E LL
Sbjct: 242 SAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301
Query: 108 -GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G+ ++ +++N +ID Y + G A + + + + TY+++ G R + E
Sbjct: 302 RGVGHNQIIFNTMIDGYCRHGMVDKALE-IKAVMERMGIQLDVYTYNTLACGLCRVNRME 360
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ +++ +M E + +++S +I S G A +F+ + T
Sbjct: 361 DAKKLLHIMTENGV-ESNYVSYTT-LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNV 418
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
M+ K G ++EA + + ++G+ Y A V+ C + + L ++ +RG
Sbjct: 419 MIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRG 478
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
P + + ++ +G+ +E + +L GL D S L+ ++++ D+
Sbjct: 479 AKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 207/467 (44%), Gaps = 47/467 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++++CY GL V+ R++R G P V + NAL+D ++ E+ A L+ M
Sbjct: 193 NILINCYRRARRPDLGLPVFGRLLRT-GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKME 251
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFG 129
G+ PN T+S + LC++ + + V+ ++ +G+ + M YN +I YS G +
Sbjct: 252 EQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWK 311
Query: 130 AAFDRLNEM-----------CNG-----------------------RNLTPGFSTYSSIL 155
+ EM CN + P +Y ++L
Sbjct: 312 ESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALL 371
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
G D + +MV + ++P +H + +I + +G + ++F+ +
Sbjct: 372 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVF---NTLINAYARLGMMDKSLLMFEDMTKQ 428
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T ++ A + GR+ +A++ ++ + + G+ + Y + C +
Sbjct: 429 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 488
Query: 275 CGLLRDVVERGYIP-CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L+ D++ +G P C + + + C +G+ E ++++ ++ G + +SL++
Sbjct: 489 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVD 548
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVV 392
YC + +A+ L +E + D+ TY+ L+DG K GR+++A+ +F D + + +
Sbjct: 549 GYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTL 608
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S S+ I++ L + A + EM++ G TY V+ G
Sbjct: 609 TSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 176/432 (40%), Gaps = 70/432 (16%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + N L++ R L ++G ++R G+ P+ F+
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFS-------------------- 226
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
YN +ID +SK+G+ A D +M + + P TYSS+++G + ++
Sbjct: 227 ----------YNALIDGFSKEGEVDKAHDLFYKM-EEQGIMPNVVTYSSLINGLCKTKEM 275
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ ++R++ MV + P + + +I S G + +FK + C
Sbjct: 276 DKAERVLRQMVGAGVRPNNMTY--NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 333
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN-----------------VLCK 267
+ AL K GR+KEA I+ + +G Y A ++ ++C+
Sbjct: 334 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 393
Query: 268 EHQPE------------------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
P+ + + D+ ++G P + S +++ C G+ +
Sbjct: 394 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 453
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-HIKIEKLKGSLDVATYDVLLD 368
E + ++D G+ D+ S L++ C+ R + KA L + K + + +++
Sbjct: 454 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 513
Query: 369 GLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
L K+GR+ E + D + + + +F +V C + +++A+ D M +G +P
Sbjct: 514 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEP 573
Query: 428 DEATYKQVISGF 439
D TY ++ G+
Sbjct: 574 DIYTYNTLVDGY 585
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/459 (18%), Positives = 182/459 (39%), Gaps = 49/459 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G++ + + V++ M VP V CN+ + AL + I+ A ++ +MV G P+
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363
Query: 82 KFTWSLV----AQILCRSGK---FEVV---------------------LGLLD------- 106
++ + A C +G F V+ LG++D
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423
Query: 107 ----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
G+ ++ ++ VI + + G A ++ N M + + P + YS ++ G
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID-TGVPPDTAVYSCLIQGQCNR 482
Query: 162 EKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ ++ M+ K + P K F S +I L G+ + +
Sbjct: 483 RDLVKAKELISDMLSKGIPPPCIKFFTS----IINNLCKEGRVAEGKDVVDLIIHTGQRP 538
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ G +KEA+ + + G+ Y V+ CK + ++ L
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
RD++ + ++ + + + +E+ +++ G+ + ++++ C N
Sbjct: 599 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 658
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
D+A L K+ + D+ T+++++ +FK GR +EA +F + +V + ++
Sbjct: 659 NCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTY 718
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++++ L + A M K PD ++I
Sbjct: 719 RVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 757
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 134/310 (43%), Gaps = 12/310 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + ++++ L ++ + + ++ G PN T++ + C G + +GL
Sbjct: 503 PCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 562
Query: 105 LDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LDS G+ + YN ++D Y K G A +M + R +T +Y+ IL G
Sbjct: 563 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR-VTLTSVSYNIILHGLF 621
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ +T V+ + M+E + +S + Y V+ L T A M+ ++ ++
Sbjct: 622 QARRTIVAKEMFHEMIESGMA----VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 677
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T +++A+ K GR +EA +++ IS G+ Y + L KE E+ L
Sbjct: 678 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNL 737
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ + P + L+ + KG+ + LS + KG+L ++ S L+ +
Sbjct: 738 FSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSV 797
Query: 338 NRQIDKAIAL 347
N + + I L
Sbjct: 798 NGKYREYIKL 807
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 176/461 (38%), Gaps = 74/461 (16%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y+ G ++ +M G VP N L++A R + + ++ M + G
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAF 132
V+P+ T+S V CR G+ + + ++D+G+ + +Y+ +I + D A
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAK 489
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIV------GLMVEKKLLPK 182
+ +++M + P ++SI++ R E +V D I+ L+ L+
Sbjct: 490 ELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDG 549
Query: 183 HFLSGN-------------------DYVIQKLSD----MGKTYAAEMIFKRACDEKIELQ 219
+ L GN Y L D G+ A +F+ +++ L
Sbjct: 550 YCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLT 609
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ +L L + R A +++H + E G+ V Y + LC+ + +E LL
Sbjct: 610 SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLE 669
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + + + + G+ +E +EL +A+ GL+
Sbjct: 670 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPT--------------- 714
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+ TY V++ L K+ E+A +F M++ S +
Sbjct: 715 --------------------ILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 754
Query: 400 VVSR-LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ R L + E+ KA ++ K G P+ T +I F
Sbjct: 755 EIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 795
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 148/327 (45%), Gaps = 8/327 (2%)
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI---YSS--VMYN 116
++ LA + G M++ G P++ T + CR + + L+D + Y V YN
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID K AFD E+ + + P TY+++++G + + R++ M++
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
KK+ P ++ GK A+ +F+ I+ T ++ L R+
Sbjct: 254 KKITPNVITYS--ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA Q++ L+ +G Y +N CK + E+ L R++ +RG + + +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G + +E S + G+ D + + L+ C N +++KA+ + ++K +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIF 383
LD+ TY ++ G+ K G++EEA +F
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ + RV +A+ + + E G Y A ++ LCK + + +++
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G P + + V C +W + LLS ++ K + + S+L++ + N ++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+A L ++ ++ D+ TY L++GL R++EA ++FD M ++ S+ +
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C K + MK EM + G + TY +I GF
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 141/329 (42%), Gaps = 8/329 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + + M G+ P + A NA++D+L + + A + + R G+ PN T++ +
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC S ++ LL I + N++ +D + K G A + EM ++
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSI 291
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TYSS+++G +++ + ++++ LMV K L + + +I +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD--VVSYNTLINGFCKAKRVEDG 349
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+F+ + T +++ + G V +A + + + GI+ Y +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + E+ + D+ +R + + + C GK +E L ++ KGL D
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+++M C+ + + AL+ K+++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ +L K RV +A + I +GI Y A VN LC + + LL D++++
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + S + + GK E +EL ++ + D SSL+ C + +ID+A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--------- 395
+ + KG L DV +Y+ L++G K R+E+ +++F M + +VS++
Sbjct: 316 QM-FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 396 ---------------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
++ I++ LC EL KA+ ++M K D
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 429 EATYKQVISG 438
TY VI G
Sbjct: 435 IVTYTTVIRG 444
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 256 SDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+D Y F +N C Q +L +++ GY P + + V C + + + L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ +++ G D +++++ C ++++ A +IE+ +V TY L++GL
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
R +A R+ M + K+ + ++ ++ ++ +A + +EM++M PD T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 432 YKQVISGF 439
Y +I+G
Sbjct: 298 YSSLINGL 305
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L +L G D SL+ +C ++ A++L K+ ++ D+ Y+ ++D L
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 372 KDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K R+ +A FD+ KE++ + ++ +V+ LC+ A + +M+K P
Sbjct: 202 KTKRVNDA---FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 428 DEATYKQVISGFM 440
+ TY ++ F+
Sbjct: 259 NVITYSALLDAFV 271
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 194/461 (42%), Gaps = 46/461 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD Y G GL++ M+ G P N L++ L ++ E A L G M++ G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 78 V-----------------------------------SPNKFTWSLVAQILCRSGKFEVVL 102
+ SP T++ LC+ G+ +
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 103 GLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L + ++++ YN +I Y + G+ AF +E+ L P TY+++LDG
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL-RSIYLFPTIVTYNTLLDG 418
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
R + EV+ ++ M+ + + P + ++ MG A+ F E +E
Sbjct: 419 LCRQGELEVAQQLKVEMINEGIAPD--IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 476
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
L + K G A + + +G Y V+ LCK EE L
Sbjct: 477 LDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASEL 536
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L+ +V G IP + + + + G+ ++ E+ +L KGL + L+ +
Sbjct: 537 LQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAG 596
Query: 338 NRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
++++A ++++ KG L +V TY+ L++GL K RM++A F M E + +
Sbjct: 597 KGRLERAFIYFSEMQE-KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
S+ I+++ C++ ++A+ + +ML G +PD T+ ++
Sbjct: 656 SYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 8/317 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G M ++ +R P + N LLD L RQ E+ +A L M+ +G++P+
Sbjct: 384 YCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 443
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLN 136
T++++ C+ G + D ++ S Y I K GD AF
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + P Y+ ++DG + E + ++ MV ++P + + +I
Sbjct: 504 EML-AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS--IIHAHL 560
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ G+ IF + + T ++ + +GR++ A + + E+GI
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + +N LCK + ++ ++VE+G P + + C G W+E L +
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680
Query: 317 LDKGLLLDSFCCSSLME 333
LD+G+ DS S+L++
Sbjct: 681 LDRGVQPDSCTHSALLK 697
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 197/461 (42%), Gaps = 44/461 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L K L +EVYR M +G P + N LLD+ + +++ L M R G
Sbjct: 205 ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 264
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
+PN T++++ L + G+FE GL L +G+ S+ YN +I Y KG A
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
EM + +P +TY+S + G + + + + + M+ LLP + + +I
Sbjct: 325 SLQEEMVL-KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD--VVSYNTLI 381
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+G A ++F + T +L L ++G ++ A Q+ + GI
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 253 VRDSDYYAFVNVLCKE--------------HQPEE---------VCGLLR---------- 279
Y VN CK H+ E + G L+
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 280 --DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+++ +G+ P + + V C G +E ELL ++ G++ D +S++ +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
N ++ K + ++ + V TY VL+ G GR+E A F M+E ++ + +
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +++ LC ++ + +A EM++ G P++ +Y +I+
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+F + ++ C +L+ L + + +A+++Y + E GI Y ++ C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + ++ LL ++ RG P + + + KG++++ + L+ +L GL + ++
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV-RIFDY 385
+ L+ Y + + +A++L ++ S VATY+ + GL K GRM +A+ ++ D
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + S+ ++ C L L KA DE+ + P TY ++ G
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 5/231 (2%)
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+R C D T ++ LSK+G ++A + + + G+ V Y + +
Sbjct: 262 RRGCAP----NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
E L ++V +G P + F+ C G+ + + LS +L LL D
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI-FDYMK 387
++L+ YC + KA L ++ + + TY+ LLDGL + G +E A ++ + +
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
E ++ I+V+ C + L A + DEML G + D Y I G
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M GF P + N ++D L + + AS L MV DGV P+ T++ + +G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E+ +L G+ SV+ Y ++I ++ KG AF +EM + + P TY+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM-QEKGILPNVITYN 623
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S+++G + + + + MVEK + P + Y I
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY----SYTI-------------------- 659
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
L ++ C G +EA+ +Y + +RG+ + A + L K+ + +
Sbjct: 660 -----LINENCNM--------GNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706
Query: 273 EVCG 276
V G
Sbjct: 707 AVHG 710
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 192/430 (44%), Gaps = 46/430 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V Y+H G D +++ M P ++A N +L AL ++ ++ A L G +++
Sbjct: 159 TVVCGLYAH-GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 217
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G+S N FT+++ + LC +G+ + L+D + V YN +I KK A
Sbjct: 218 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 277
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L M N L F TY++I+DG Y K +
Sbjct: 278 MHYLRRMMNQGCLPDDF-TYNTIIDG---YCKISM------------------------- 308
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+Q+ +++ K + +FK +++ T ++ L EG V+ A+++++ +GI
Sbjct: 309 VQEATELLK----DAVFKGFVPDQV-----TYCSLINGLCAEGDVERALELFNEAQAKGI 359
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + V LC + ++ ++ E G P + + C G +
Sbjct: 360 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 419
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+++ + KG L D F ++L++ YC ++D A+ L ++ + + D TY+ +L+GL
Sbjct: 420 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 479
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G++ E F M LK + ++ I++ C ++ +A K +M + G PD
Sbjct: 480 KAGKVNEVNETFQEMI-LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 538
Query: 430 ATYKQVISGF 439
++ +I GF
Sbjct: 539 VSFNTLIYGF 548
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 172/420 (40%), Gaps = 41/420 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y+ G D ++ + M ++ PA A NA++DAL A +Y M+ GVSP+
Sbjct: 63 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 122
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
T ++ + C + + + L LL + +
Sbjct: 123 LHTHTIRLRSFCLTARPHIALRLLRALPHR------------------------------ 152
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
G Y +++ G + T + ++ M+ + P L+ + V+ L G
Sbjct: 153 -----GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPN--LAAFNKVLHALCKRGDV 205
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD-SDYYA 260
A ++ + + + T ++ L + GR+ EA+++ + R V D Y
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL--VDGMRAYAVPDVVTYNT 263
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LCK+ P+E LR ++ +G +P + + C +E ELL + KG
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D SL+ C+ +++A+ L + + D+ Y+ L+ GL G + A+
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + M E ++ IV++ LC + + A ++ + G+ PD T+ +I G+
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 174/408 (42%), Gaps = 10/408 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR Y VP V N L+ L +++ + A M+ G P+ FT++ + C+
Sbjct: 250 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 308
Query: 98 FEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ LL ++ V Y +I+ +GD A + NE + + P Y+
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKPDIVVYN 367
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++ G + +++ M E+ P + + VI L MG A ++ A
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAEEGCHPD--IQTYNIVINGLCKMGNISDATVVMNDAI 425
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T ++ K ++ A+Q+ + E GI Y + +N LCK +
Sbjct: 426 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 485
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
EV ++++ +G P + + + + C K +E +++ + +GL D+ ++L+
Sbjct: 486 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 545
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+C N ++ A L K+E+ S T++ L+ M A +IFD M +
Sbjct: 546 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 605
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ +++ C + +A + EM+K G P +T+ +VI+
Sbjct: 606 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 653
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 163/381 (42%), Gaps = 8/381 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y + + E+ + GFVP +L++ L + ++ A L+ G
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 78 VSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ P+ ++ + + LC G +V+ + + G + + YN+VI+ K G+ A
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+N+ + P T+++++DG + K + + ++V M E + P + V+
Sbjct: 419 VVMNDAIM-KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS--VL 475
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L GK F+ + T +++ + +++EA ++ +S+ G+
Sbjct: 476 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 535
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ + C+ E L + + E+GY A + + + GK E++
Sbjct: 536 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+L KG DS+ L++ C +D+A +++ K ++T+ +++ L
Sbjct: 596 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 655
Query: 373 DGRMEEAVRIFDYMKELKVVS 393
+ R+ +AV I M ++ VV
Sbjct: 656 NHRVFQAVGIIHIMVKIGVVP 676
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 155/380 (40%), Gaps = 43/380 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG ++V++ G D V + G++P V N L+D ++ ++
Sbjct: 392 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 451
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M G++P+ T++ V LC++GK V + +++ K
Sbjct: 452 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV---------NETFQEMIL-----K 497
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G C+ P TY+ +++ R K E + +++ M ++ L P +
Sbjct: 498 G------------CH-----PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD-AV 539
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S N +I G A ++F++ ++ DT ++ A S + + A +I+
Sbjct: 540 SFNT-LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 598
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +G Y ++ CK + L +++++G+IP R + S +
Sbjct: 599 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 658
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KGSLDVATY 363
+ ++ ++ G++ + +++ N + A I +E L KG + TY
Sbjct: 659 VFQAVGIIHIMVKIGVVPE--VVDTIL-----NADKKEIAAPKILVEDLMKKGHISYPTY 711
Query: 364 DVLLDGLFKDGRMEEAVRIF 383
+VL +G+ +D ++ R+
Sbjct: 712 EVLHEGV-RDNKLTRKHRML 730
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 195/468 (41%), Gaps = 51/468 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S++++ S G E+Y M+ G P V N LL +QN + A L V
Sbjct: 365 FSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV 424
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFG 129
+G++ + T+++V LC GK L D GI S V YN +I + KKG
Sbjct: 425 ENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKG--- 480
Query: 130 AAFDRLNEMCNG---RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D +E+ NG L P TY+ +++G+ + E + + MV ++P +
Sbjct: 481 -CMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTF 539
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L +G+ A + T C++ KEG + A +Y +
Sbjct: 540 NS--IINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREM 597
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
I+ Y + +N CK ++ + + D+ +G + +A C
Sbjct: 598 CRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDM 657
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ + S +L+ GL ++ + ++ Y + ++ A+ LH ++ K D+ Y L
Sbjct: 658 ENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSL 717
Query: 367 LDGLFKDGRMEEAVRIFDYM--------------------------------KELKVVSS 394
+DGL K+G++ A+ ++ M KE+ +
Sbjct: 718 IDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNI 777
Query: 395 SSFVIVVSRLC--HLKE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ V++ + L H KE L++A + HDEML G PD+ TY +++G
Sbjct: 778 TPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 173/430 (40%), Gaps = 55/430 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y +G L ++ + G P V+ + L++ + + A+ LY M G+ P
Sbjct: 337 YCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPT 396
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
F + + + + E LLD +GI S V YN+V+ + + G ++NE
Sbjct: 397 VFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELG-------KVNE 449
Query: 138 MCN------GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
CN G+ +TP +Y+ ++ G + + + ++ ++E L P
Sbjct: 450 ACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI------- 502
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
TY +++ K+G + A ++ + GI
Sbjct: 503 ---------TYT---------------------ILMEGSFKKGDCEHAFNMFDQMVAAGI 532
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
D + + +N LCK + E L +++ +IP +M + + +G E
Sbjct: 533 VPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAES 592
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ + + + +SL+ +C + ++D A+ +H +++ LD+ Y L+ G
Sbjct: 593 VYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFC 652
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K ME A + F + E+ + ++ + I++S +L + A+ H EM+ D
Sbjct: 653 KMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLK 712
Query: 431 TYKQVISGFM 440
Y +I G +
Sbjct: 713 IYTSLIDGLL 722
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/472 (19%), Positives = 180/472 (38%), Gaps = 80/472 (16%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN-------- 61
S S + +L Y + +E +R M G VP V N LL A+ R+N
Sbjct: 150 SDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRL 209
Query: 62 ----------------EIRLASCL-----------YGAMVRDGVSPNKFTWSLVAQILCR 94
++ + +CL +G G+ + ++S+V Q +CR
Sbjct: 210 FDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCR 269
Query: 95 SGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
++ L++ + S Y VI + G+FG A +EM + R + +
Sbjct: 270 GSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSR-VPVNVA 328
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+S++ G + R+ +VE + P ++ +I+ S +G A ++
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPN--VAIFSVLIEWCSKIGNVEKANELYT 386
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R ++ +LK K+ ++ A + E GI + Y + LC+
Sbjct: 387 RMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVT-YNIVLLWLCELG 445
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E C L ++ +G P + + + C KG + E+++ +++ GL ++
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI--- 502
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
TY +L++G FK G E A +FD M
Sbjct: 503 --------------------------------TYTILMEGSFKKGDCEHAFNMFDQMVAA 530
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+V + +F +++ LC + + +A + +K P TY +I G++
Sbjct: 531 GIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYV 582
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 211/466 (45%), Gaps = 79/466 (16%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
GL +D + + ++R G A AL L+R + G P+ F++
Sbjct: 138 GLGIDTIMISNLLR--GLCEAKRTAEALDILLHRMPHL-------------GCVPDVFSY 182
Query: 86 SLVAQILC---RSGKFEVVLGLLDSG----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
+V + LC +SG+ + +L ++ G + ++V YN VID + K+GD A D NEM
Sbjct: 183 CIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEM 242
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
R ++P STY+ +++ + + ++ I+ MV+K +LP ++ + +I S
Sbjct: 243 VQ-RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNS--LIYGYSST 299
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ A + K+ + I T ++ +L K G++K+A ++ ++ +G + +D
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG---QKTDI 356
Query: 259 YAF----------------------------------VNVLCKEHQPEEVCGLL------ 278
+++ NVL K + CG+L
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAK---CGMLDRATII 413
Query: 279 -RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ E+G P + S +A+ C GK + E + ++D+G+ L++ +C+
Sbjct: 414 FNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCT 473
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+ + KA L +++ D+ ++ +++ L K GR+ +A IFD+ + + +
Sbjct: 474 HGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPN--- 530
Query: 398 VIVVSRL----CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+V + L C + ++ A++ D M+ G +P+ Y +++G+
Sbjct: 531 VMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGY 576
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 164/389 (42%), Gaps = 33/389 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G+ + + ++L+ Y+ KG +D E++ +M G P N L+ A + +
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDR 409
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A+ ++ M GV P+ T+S V LCR GK +
Sbjct: 410 ATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD-------------------------- 443
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A ++ N+M + + + P STY ++ G + + +V M+ K + P +
Sbjct: 444 ----DAVEKFNQMID-QGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD--I 496
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+++I L +G+ A+ IF + ++ G+++ A++++ +
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI Y VN CK + +E L R+++ +G P + + G+
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ +D + S ++ N D+AI L ++ + +D+ T ++
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
++ G+F+ R+EEA +F + +V S
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPS 705
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 146/347 (42%), Gaps = 37/347 (10%)
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN- 188
A F+R++ R L+P TY ++D R + +++ G +++ L + N
Sbjct: 90 ALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNL 149
Query: 189 --------------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDDT--------- 222
D ++ ++ +G ++ ++ K C ++ Q D
Sbjct: 150 LRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGG 209
Query: 223 CGCMLKALS---------KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
C+ A++ KEG V +A +++ + +RGI+ S Y VN LCK ++
Sbjct: 210 AVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDK 269
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+LR +V++G +P + + G+WKE + + +G+L D +SLM
Sbjct: 270 AEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMA 329
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + +I A + + D+ +Y ++L+G G + + +F+ M +
Sbjct: 330 SLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP 389
Query: 394 SSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S F +++ L +A +EM + G +PD TY VI+
Sbjct: 390 DSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 19/395 (4%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ SC G S A S+V+D + G D + M +G N+LLD R+
Sbjct: 123 LGSCPGSVSPL-AASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRK 181
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYN 116
+ L M G+ T++++ L +G V ++D +V +Y
Sbjct: 182 DDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
VI+ Y + G+ A + +E C G + P TY +++G + + E ++ ++ M
Sbjct: 242 AVINAYCRAGNVRRASEVFDE-CVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQG 300
Query: 177 KKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEK--IELQDDTCGCMLKALS 231
+ + + + Y Q + D A M EK IEL T + L
Sbjct: 301 RGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAM-------EKMGIELDVYTYNTLACGLC 353
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ R+ EA + H++ E+G+ Y +++ CKE E L R++ +G +P +
Sbjct: 354 RVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVV 413
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + KG +E E + KGL+ D + +SL+ +C N ++D A+ L ++
Sbjct: 414 TYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEM 473
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +V Y L+ GL K+GR EEA +++D M
Sbjct: 474 KHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDM 508
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 178/419 (42%), Gaps = 26/419 (6%)
Query: 37 MMRVYGFVP-AVS--ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ R G P +VS A + ++D + + A L M R GV N ++ +
Sbjct: 119 LTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYV 178
Query: 94 RSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R V LL + GI ++V Y +++D S GD ++EM +N+
Sbjct: 179 RRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEM-KAKNVAGDV 237
Query: 149 STYSSILDGARRY----EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
Y+++++ R +EV D VG +E P G +I +G+ AA
Sbjct: 238 YLYTAVINAYCRAGNVRRASEVFDECVGNGIE----PNERTYG--VLINGFCKIGQMEAA 291
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
EM+ + M+ ++G V A+++ + + GI + Y
Sbjct: 292 EMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACG 351
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC+ ++ E LL ++E+G P + + ++ C +G E L + KG +
Sbjct: 352 LCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPS 411
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +M+ Y I +A ++EK DV TY L+ G +G+++ A+++F+
Sbjct: 412 VVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFE 471
Query: 385 YMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK E VV ++ ++S L +A + +D+MLK G PD++ Y ++
Sbjct: 472 EMKHRGTEPNVV---AYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 47/263 (17%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D Y +G+ + L+V M G V N L L R N + A L M+
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 75 RDGVSPNKFTWSLVAQILCRSGK-------FEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
GV PN T++ + I C+ G F + G + S V YN+++D Y KKG
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAG--KGAMPSVVTYNVMMDGYIKKGS 427
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A +R + + L P TY+S++ G H ++G
Sbjct: 428 IREA-ERFRKEMEKKGLVPDVYTYASLVHG-------------------------HCVNG 461
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
V KL F+ E ++ L+KEGR +EA Q+Y +
Sbjct: 462 KVDVALKL------------FEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDML 509
Query: 248 ERGITVRDSDYYAFVNVLCKEHQ 270
+ G+T DS Y A V L +++
Sbjct: 510 KAGLTPDDSLYSALVGSLHTDNR 532
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 185/442 (41%), Gaps = 44/442 (9%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + +P +CNA L L + E L+ + MV G++P FT++++ +C+ G
Sbjct: 88 MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147
Query: 98 -------FEVV---------------------LGLLDSGI------------YSSVMYNL 117
FE + +GLLD + + YN
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
+I+ + K AF+ EM ++L P +YS+++D + +++ + M
Sbjct: 208 LINSFCKFKGMLRAFEFFREM-KDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRV 266
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
LLP F + +I G A M+ E ++L T +L L +EG +
Sbjct: 267 GLLPNEFTYSS--LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMN 324
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA +++ + + G+T Y A ++ K ++ L ++ E+ P + V
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C + K +E + +++ + + G+ + ++LM+ Y +AI L ++ L
Sbjct: 385 WGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTE 444
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKN 416
+ V T+ L+DGL K G ++EA+ F M + + + + + ++ LC + A K
Sbjct: 445 VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKL 504
Query: 417 HDEMLKMGHKPDEATYKQVISG 438
DEM PD+ Y +I G
Sbjct: 505 FDEMQDKNMIPDKIAYTAMIDG 526
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 172/423 (40%), Gaps = 17/423 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y GL + + ++ M+ G P V NAL+++ + + A + M
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL---------GLLDSGIYSSVMYNLVIDFYSKKGDF 128
+ PN ++S + LC+ G ++ + GLL + Y+ +ID K G+
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPN----EFTYSSLIDANCKAGNL 288
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G AF +EM ++ TY+++LDG ++ + M + + P L
Sbjct: 289 GEAFMLADEMLQ-EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN--LQAY 345
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I + A +F ++ I+ G ++ L E +++E I + E
Sbjct: 346 TALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKE 405
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI Y ++ K E LL ++ + G + + C +G +E
Sbjct: 406 SGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQE 465
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ D L + ++L++ C N I A L +++ D Y ++D
Sbjct: 466 AIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMID 525
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K G +EA+ + + M E+ + + ++ +V L ++++A K EM+ G P
Sbjct: 526 GNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIP 585
Query: 428 DEA 430
DE
Sbjct: 586 DET 588
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 136/317 (42%), Gaps = 18/317 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +LD +G+ + E++R M G P + A AL+ + + A L+ M
Sbjct: 311 TTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMRE 370
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
+ P+ W + LC K E ++ + +SGI + V+Y ++D Y K G+
Sbjct: 371 KDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTE 430
Query: 131 AFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + L EM + G +T T+ +++DG + + + G M P H L N
Sbjct: 431 AINLLEEMRDLGTEVT--VVTFCALIDGLCKRGLVQEAIYYFGRM------PDHDLQPNV 482
Query: 190 YVIQKLSD-MGKTYA---AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
V L D + K A+ +F D+ + M+ K G +EA+ + +
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ E GI + Y + V L + Q ++ L +++ +G IP +R + G
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGN 602
Query: 306 WKEVEELLSAVLDKGLL 322
E EL + +++KGL+
Sbjct: 603 IDEAIELQNELVEKGLI 619
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/410 (17%), Positives = 159/410 (38%), Gaps = 34/410 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D +G+ ++ + M G +P ++L+DA + + A L M++
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+ V N T++ + LC G M N + + G G
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEG-----------------MMNEAEELFRAMGKAG------ 337
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+TP Y++++ G + + + + M EK + P L G ++ L
Sbjct: 338 --------VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGT--IVWGL 387
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
K ++I + I ++ A K G EAI + + + G V
Sbjct: 388 CSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTV 447
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ A ++ LCK +E + + P + + C + ++L
Sbjct: 448 VTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDE 507
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ DK ++ D +++++ + +A+ + K+ ++ LD+ Y L+ GL + G+
Sbjct: 508 MQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQ 567
Query: 376 MEEAVRIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLKMG 424
+++A + M ++ + ++ + L + +A++ +E+++ G
Sbjct: 568 VQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ L + G ++ A Q + +++ + + AF++ L K + + RD+V G
Sbjct: 68 LFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAG 127
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C +G L + GL D ++L++ Y +D+++
Sbjct: 128 IAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESV 187
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L +++ + DV TY+ L++ K M A F MK+ + + S+ ++ L
Sbjct: 188 CLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDAL 247
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
C ++ A+K +M ++G P+E TY +I
Sbjct: 248 CKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 120/299 (40%), Gaps = 4/299 (1%)
Query: 142 RNL-TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
RN+ PGF + ++ E + + M + ++LPK S N + + +LS G+
Sbjct: 55 RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKA-RSCNAF-LHRLSKAGE 112
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ F+ I T M+ + KEG + A ++ + + G+T Y
Sbjct: 113 GDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNT 172
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ K +E L ++ G P + + + S C E + DK
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L + S+L++ C + AI + + ++ + TY L+D K G + EA
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAF 292
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ D M + V ++ ++ ++ LC + +A + M K G P+ Y +I G
Sbjct: 293 MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHG 351
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 197/449 (43%), Gaps = 27/449 (6%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFV-----PAVSACNALLDALYRQN 61
+D Q D V+ C F + + + RV G + P V A NA++ + N
Sbjct: 3 AKDYQPD----VILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKAN 58
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMY 115
I A + M R G SP+ T +++ C GK ++ L + + + + + Y
Sbjct: 59 RIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
++I+ Y +G A L+EM + R L P TY+ I G + K + + V +
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLS-RGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLN 177
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM----IFKRACDEKIELQDDTCGCMLKALS 231
+ P + +++ L + GK E IF R C+ + T ++ +L
Sbjct: 178 SRGCKPDVITY--NILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV----TYSILISSLC 231
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
++G+++E++ + ++ E+G+T Y + C+E + + L ++ G++P +
Sbjct: 232 RDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIV 291
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ +A+ C G E+ + + G + ++++ S+ +A+ + ++
Sbjct: 292 NYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQM 351
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKEL 410
DV TY+ L+ L +DG ++EA+ + M + + S+ V+ LC +
Sbjct: 352 LSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRI 411
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A++ M++ G +P+E TY +I G
Sbjct: 412 DDAIEVLAAMIENGCQPNETTYTLLIEGI 440
>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
Length = 817
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 202/478 (42%), Gaps = 70/478 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G L++++ ++ +G ++++ M YGF ++ + L++ L NE+ A
Sbjct: 272 GMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKA 331
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVID 120
LY M RD V+P+ + + CR G F V ++ + ++YN++++
Sbjct: 332 VKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILE 391
Query: 121 FYSKKGDFGAAFDRLNEMCNG------------------RNLTPGFSTYSSILDGARRYE 162
+ G+ AA L+ M G ++ P +++ ++ G + +
Sbjct: 392 GLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVK 451
Query: 163 KTEV----SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
K ++ + +VGL + KLL ND +++ L + + A IF + D ++
Sbjct: 452 KLDLALALTKDMVGLGCKGKLL-----MFNDLILE-LCNSDRLDEAYEIFNQMKDLDLKP 505
Query: 219 QDDT-----------------------------------CGCMLKALSKEGRVKEAIQIY 243
+ T C M++ L GR+ EA+Q
Sbjct: 506 SEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFL 565
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + G Y A +N +CK + E GL RD+ + Y+P + + +
Sbjct: 566 DEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKA 625
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
GK+ E +E++ +L KGL + +++ +C + +IDKAI+ K+ + V TY
Sbjct: 626 GKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTY 685
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
LLDGL GR +EA+ ++ M E + ++ ++ LC A+ ++EM
Sbjct: 686 TSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCKCGRTETAVNYYEEM 743
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/500 (19%), Positives = 190/500 (38%), Gaps = 65/500 (13%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M+ SC L+ +L+CY + G D V + M +V L A +
Sbjct: 197 MVASCGEESVDRYTLTSLLNCYCNAGRPEDASAVLQRMSERAWVDE-HVLTMLAVAFSKW 255
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----------GIY 110
++ A L G M G+ P++ T +++ R G+ +V + + D +Y
Sbjct: 256 GKVEDAVELIGRMEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMY 315
Query: 111 SSVMYNL------------------------------VIDFYSKKGDFGAAFDRLNEMCN 140
S ++ L +I+ + ++GDF +NE N
Sbjct: 316 SVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINE--N 373
Query: 141 GRNLTPGFST--YSSILDGARRYEKTEVSDRIVGLMV-------EKKLLPKHFLSGNDYV 191
+L PG + Y+ IL+G + + E + +++ MV + + H + ++ V
Sbjct: 374 AVHLKPGSAVLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDV 433
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA-----------LSKEGRVKEAI 240
+ SD + + D + L D G K L R+ EA
Sbjct: 434 -KPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAY 492
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+I++ + + + + Y + +C+ LLR++ + P + V
Sbjct: 493 EIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQL 552
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ E + L +L G L D S+ M C + + A+ L I DV
Sbjct: 553 CFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDV 612
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
+++L++G K G+ +EA I + M + S ++ +++ C ++ KA+ +
Sbjct: 613 VAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYK 672
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ P TY ++ G
Sbjct: 673 MIDEEKPPTVVTYTSLLDGL 692
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 43/292 (14%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ R MR P + C ++ L I A M++ G P+ T+S +
Sbjct: 528 DLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGM 587
Query: 93 CRSGKFEVVLGL---LDSGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G+ E LGL + S Y V +N++I+ + K G F A + + EM + + L P
Sbjct: 588 CKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLS-KGLFPS 646
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+ ++D + K + + V M++++ P TY +
Sbjct: 647 VVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVV----------------TYTS--- 687
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+L L GR EAI ++ +SE+G + + Y AF+N LCK
Sbjct: 688 ------------------LLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCK 729
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ E ++ + + L S +G+ + ELL VL K
Sbjct: 730 CGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELLKVVLQK 781
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 222 TCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCGLLR 279
T C+L AL+K GR ++A ++ +++ G D + +N C +PE+ +L+
Sbjct: 173 TYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTSLLNCYCNAGRPEDASAVLQ 232
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ ER ++ + L+ + GK ++ EL+ + G+ + L+ +
Sbjct: 233 RMSERAWVDEHV-LTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGFARQG 291
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
++D A+ + K+ S+D+A Y VL++GL M +AV++++ MK +V
Sbjct: 292 RVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTP 345
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 135/339 (39%), Gaps = 62/339 (18%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+S YN ++D +K G A RL EM C ++ T +S+L+ + E +
Sbjct: 170 NSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDR--YTLTSLLNCYCNAGRPEDA 227
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
++ M E+ + +H L+ + S GK A + R ++ + T ++
Sbjct: 228 SAVLQRMSERAWVDEHVLT---MLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLV 284
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+++GRV A+ ++ ++ G +V + Y + LC ++ + L D+
Sbjct: 285 HGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVT 344
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P L + + + C +G + V ++ A+
Sbjct: 345 PDVRLLKKMIEAFCRQGDFSTVGPFINEN-----------------------------AV 375
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--------------KELKVVS 393
H+K GS V Y+V+L+GL G +E A ++ M + V+S
Sbjct: 376 HLK----PGSA-VLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVIS 430
Query: 394 ------SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
S SF IVV LC +K+L A+ +M+ +G K
Sbjct: 431 EDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCK 469
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 117/320 (36%), Gaps = 37/320 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ E++ M+ P+ N+L + R+ + A+ L M P + +
Sbjct: 490 EAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMV 549
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
Q LC SG+ L LD M L P
Sbjct: 550 QQLCFSGRITEALQFLDE------MLKL-------------------------GFLPDIV 578
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TYS+ ++G + +TE + + + K LP + ++ +I GK A+ I +
Sbjct: 579 TYSAAMNGMCKIGETENALGLFRDISSKCYLPD--VVAHNILINGFRKAGKFDEAQEIME 636
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQ-IYHLI-SERGITVRDSDYYAFVNVLCK 267
+ + T M+ K G++ +AI +Y +I E+ TV Y + ++ LC
Sbjct: 637 EMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTV--VTYTSLLDGLCN 694
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+P+E L + E+G P + + F+ C G+ + + K LD F
Sbjct: 695 AGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCKCGRTETAVNYYEEMKTKCFDLDIFS 754
Query: 328 CSSLMEYYCSNRQIDKAIAL 347
+L + Q K L
Sbjct: 755 LLNLTNSLIAQGQASKGCEL 774
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 192/431 (44%), Gaps = 29/431 (6%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ ++ + G P + + + L++ ++R A ++ +++ G PN T + + +
Sbjct: 91 ISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKG 150
Query: 92 LCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + K + L D + ++ V Y +I+ K G+ AA L ++ G+ ++
Sbjct: 151 FCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQI-EGKLVST 209
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
YS+I+DG + + + + M+ K++ P + + +I +G+ A
Sbjct: 210 DVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPT--VVTLNSLIYGYCIVGQFKEAFG 267
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT-------------- 252
+ + + I T ++ AL KEG++KEA ++ + G+
Sbjct: 268 LLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYC 327
Query: 253 -VRDSD-----YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
V + + Y +N CK ++ L ++ R P + + + C G+
Sbjct: 328 LVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI 387
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
EL+ + D G D +SL++ C N +DKAIAL KI+ LD+ TY++L
Sbjct: 388 SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNIL 447
Query: 367 LDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+DGL K GR+++A IF D + + ++ ++ I+++ LC L +A +M G
Sbjct: 448 IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGC 507
Query: 426 KPDEATYKQVI 436
PD T + +I
Sbjct: 508 VPDAVTCETII 518
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 150/349 (42%), Gaps = 30/349 (8%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M++ EG+ +D + S ++D L D E+Y M P V N+L+
Sbjct: 198 MLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYC 257
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV----VLGLLDSGI----- 109
+ + A L MV ++P+ +T++++ LC+ GK + + ++ G+
Sbjct: 258 IVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVV 317
Query: 110 -YSSVM---------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
YSS+M Y++VI+ + K A EM R + P TY+S
Sbjct: 318 TYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEM-RCRRIAPDTVTYNS 376
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++DG + + + +V M + P ++ N +I L A + K+ D
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQ-PADIITYNS-LIDALCKNHHVDKAIALVKKIKD 434
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ I+L T ++ L K+GR+K+A I+ + +G + Y +N LC E E
Sbjct: 435 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNE 494
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
LL + + G +P A+ + + K + E+LL ++ +GLL
Sbjct: 495 AETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 143/341 (41%), Gaps = 23/341 (6%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
+ ++D L + + A LY M+ +SP T + + C G+F+ GLL +
Sbjct: 215 STIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVL 274
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
++ +N+++D K+G A + M + P TYSS++DG +
Sbjct: 275 KNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMK-EGVMPDVVTYSSLMDGYCLVNEVN 333
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ + +++ N + K+ D + EM +R + + T
Sbjct: 334 KAKHVYSIVI------------NGFCKIKMVDKALSLFYEMRCRRIAPDTV-----TYNS 376
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L K GR+ A ++ + + G Y + ++ LCK H ++ L++ + ++G
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG 436
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ + C +G+ K+ + + +L KG L + + ++ C +++A
Sbjct: 437 IQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAE 496
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L K+E D T + ++ LF++ + E A ++ M
Sbjct: 497 TLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREM 537
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G ++ L K G + A+Q+ I + ++ Y ++ LCK+ + L +++
Sbjct: 180 GTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMIT 239
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+ P + L+ + C G++KE LL ++ K + D + + L++ C +I +
Sbjct: 240 KRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKE 299
Query: 344 A---IALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
A IA+ +K +G + DV TY L+DG + +A ++ I
Sbjct: 300 AKSGIAVMMK----EGVMPDVVTYSSLMDGYCLVNEVNKAKHVYS--------------I 341
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V++ C +K + KA+ EM PD TY +I G
Sbjct: 342 VINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGL 381
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 91/252 (36%), Gaps = 36/252 (14%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G +L +L K I +++ + GI +N C Q + +++
Sbjct: 75 GKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILK 134
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
GY P + L+ V C K KE VL G + +L+ C +
Sbjct: 135 MGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRA 194
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-------- 395
A+ + +IE S DV Y ++DGL KD + +A ++ M ++ +
Sbjct: 195 ALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIY 254
Query: 396 ----------------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+F I+V LC ++++A M+K G P
Sbjct: 255 GYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMP 314
Query: 428 DEATYKQVISGF 439
D TY ++ G+
Sbjct: 315 DVVTYSSLMDGY 326
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 190/470 (40%), Gaps = 47/470 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN------- 61
+ + +A V+ YS G + + V MM+ G P +S CN + L N
Sbjct: 166 ERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 225
Query: 62 --------EIRLASCLYGAMVR--------------------DGVSPNKFTWSLVAQILC 93
EI Y +++ G SP+K ++ V LC
Sbjct: 226 FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC 285
Query: 94 RSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ + + V L++ + S V YN + SK G A + L E R
Sbjct: 286 KEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE-AEERRFRVD 344
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
YS+I+ R + + + IV M K +P + VI L K A+ +
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD--VVTYTSVINGLCQERKVDQAKKM 402
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
++ + + +L L K G EA ++ ++ E Y ++ +
Sbjct: 403 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRR 462
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E + E C L+R+++++G+ P +E++ + S C + K E + + L+ G ++
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 522
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++++ +C ++ A++L + DV TY ++D L K GR+EEA ++ M
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ + ++ V+ + C + + +K ++ML + Y QVI
Sbjct: 583 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVI 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 127/294 (43%), Gaps = 8/294 (2%)
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKL--LPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
Y ++L+ + + + + R++ LM ++++ P+ F YV+ S GK A +
Sbjct: 136 VYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAF----GYVMVSYSRAGKLRNAMRV 191
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
IE C + L R+ +A++ + I Y + C
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCD 251
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSF 326
H+ E+ L+ ++ +G P + + C + + KEV L+ +L D LL D
Sbjct: 252 LHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQV 311
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++ + + D+A+ + E+ + +D Y ++ ++GRM++A I + M
Sbjct: 312 TYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEM 371
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ V++ LC +++ +A K +M K G KP+ +Y +++G
Sbjct: 372 FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 148/366 (40%), Gaps = 48/366 (13%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD----GARRYEKTEVSDRI 170
+ V+ YS+ G A R+ M + P S ++ + G R + +R+
Sbjct: 172 FGYVMVSYSRAGKLRNAM-RVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 230
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ +E ++ + L + +L D AEM FK +KI ++ L
Sbjct: 231 QIVEIEPNVITYNCLIKGYCDLHRLED-AMELIAEMPFKGCSPDKISYY-----TVMGFL 284
Query: 231 SKEGRVKEA-IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
KE R+KE + + ++ + + Y FV++L K +E LR+ ER +
Sbjct: 285 CKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ S V S C +G+ + +E+++ + KG + D +S++ C R++D+A +
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR 404
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEA--------------------VRIFDYMKEL 389
++ K + +Y LL+GL K+G EA V + + +E
Sbjct: 405 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREG 464
Query: 390 KVVSSSSFV----------------IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
K + V +++ LC +++ +A + ++ L G + +
Sbjct: 465 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 524
Query: 434 QVISGF 439
VI GF
Sbjct: 525 TVIHGF 530
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 10/224 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ + +G + ++ R M GF P N L+ +L ++ ++ A +
Sbjct: 454 SVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLN 513
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
+G + N ++ V C+ E L LLD S+ V Y +ID KKG
Sbjct: 514 NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEE 573
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M L P TY +++ R + E + ++EK L + + +
Sbjct: 574 ATKLAMKMLRV-GLIPTPVTYRTVIHQYCRMGRVEDLLK----LLEKMLSRQECRTAYNQ 628
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VI+KL G A + + ++ +TC ++++ +G
Sbjct: 629 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 672
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 200/463 (43%), Gaps = 52/463 (11%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ KG G + +M + P A N +++A + A + M+ G +P
Sbjct: 276 FCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPT 335
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ V C+ G ++ GL + G +++MYN +++ Y K + A + L
Sbjct: 336 VVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA-NMLY 394
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR------IVGL----------------- 173
E + + P T++ ++ G +Y + E DR ++GL
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454
Query: 174 ------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
M+EK L P + + VI S G A +K +
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPS--IIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 512
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG---LL 278
TC +L LS GR++EA ++ + E+G++V + AF +L K + +V G L
Sbjct: 513 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN---MAFTVLLDKFFKRGDVVGAQSLW 569
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ RG P + S F+ +G +E + +L KGL+ ++F +SL+ +C
Sbjct: 570 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKC 629
Query: 339 RQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
++++A+ L K+ + +G L D+ T ++++ GL K GRM A+ +F M + + +
Sbjct: 630 GKLNEALKLE-KVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIIT 688
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +++ C ++ A + M G PD TY I GF
Sbjct: 689 YNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 731
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 152/367 (41%), Gaps = 34/367 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+ YS GL E Y++M +G P+ S C++LL L ++ A+ L G M
Sbjct: 478 AFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 537
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+ G+S N ++ + +++D + K+GD A
Sbjct: 538 IEKGLSVN------------------------------NMAFTVLLDKFFKRGDVVGAQS 567
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
EM R + P +S+ +DG + E + + M+ K L+P +F + +I
Sbjct: 568 LWGEM-ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF--AYNSLIC 624
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
GK A + K + T ++ L K+GR++ AI ++ + + G++
Sbjct: 625 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 684
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N CK L+ + G P + + C + +L
Sbjct: 685 DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 744
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ G++ ++ +S++ CS+ +D+A+ L ++ K+ +V T ++LL +K
Sbjct: 745 DELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803
Query: 374 GRMEEAV 380
G E +
Sbjct: 804 GMPERTL 810
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 192/475 (40%), Gaps = 50/475 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L ++ + + + LE+ MR G P+ S L L R +
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWK 252
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGI--YSSVMYNLVIDFYS 123
L+ ++R G P K+T+S + CR G E +L L+ ++ YN+VI+
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+G A N M R P T++++++ + + ++ + E P
Sbjct: 313 IRGRTSDALAWFNLMIE-RGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 371
Query: 184 FLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ N YV + D A M+++ + I T ++ K GR ++
Sbjct: 372 IMYNTLMNGYVKMREID-----QANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 426
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA-- 298
++ IS G+ S + V+ LC + +E L D++E+G P + + +A
Sbjct: 427 RLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 486
Query: 299 SQCG---------------------------------KGKWKEVEELLSAVLDKGLLLDS 325
SQ G G+ +E EL+ +++KGL +++
Sbjct: 487 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 546
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-D 384
+ L++ + + A +L ++E+ DV + +DGL K G +EEA +F +
Sbjct: 547 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 606
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ + ++ ++ ++ C +L +A+K M G PD T +I G
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 661
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + A +++LD + +G + ++ M G P V A +A +D L +Q +
Sbjct: 540 KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEE 599
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL--------LDSGIYSSVMYNL 117
A ++ M+R G+ PN F ++ + C+ GK L L L I+++ N+
Sbjct: 600 AYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTT---NM 656
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+I K+G +A + +M + L+P TY+++++G
Sbjct: 657 IIGGLCKQGRMRSAINVFMDM-HQTGLSPDIITYNTLING 695
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 196/446 (43%), Gaps = 54/446 (12%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ +G +S + + V+ +KG D L V M ++G ++ + ++
Sbjct: 314 AAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL 373
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLV 118
A L+ M + G++ ++ T + + LCR+G+ + V+ ++D G+ V Y ++
Sbjct: 374 AAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVL 433
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID Y K+G+ AF NEM GR + P TY+++ DG
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMV-GRRVAPNVVTYTALSDG--------------------- 471
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L G AA + C++ +EL T ++ L K G +++
Sbjct: 472 ----------------LCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQ 515
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A++I + G Y ++ LCK + + +L++++++G P + +
Sbjct: 516 AMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMN 575
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G+ + ++LL +L+K + + +SLM+ YC IDK + +I K S
Sbjct: 576 GFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC----IDKNMKSTTEIYKGMHSQ 631
Query: 359 DVA----TYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKA 413
+VA TY++L+ G K M+EA+ M E + +++SS+ ++ L K+ +A
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691
Query: 414 MKNHDEMLKMG--HKPDEATYKQVIS 437
D+M G +PD ++ IS
Sbjct: 692 RVFFDKMRNEGLTAEPDVYSFYMDIS 717
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 178/418 (42%), Gaps = 18/418 (4%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
L + E+ R +R YG P+ +CNA+L L I A+ R+ N + +
Sbjct: 208 LCLPSAELLRRLRQYGLSPSPESCNAVLSRLPLDEAI--------ALFRELPDKNVCSHN 259
Query: 87 LVAQILCRSGKFEVVLGLLD--SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
++ + L +G+ + D S V Y ++ Y +G+ A L+EM + L
Sbjct: 260 ILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMA-AKGL 318
Query: 145 TPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ Y+S++ A K +VSD R++ M + + VI G
Sbjct: 319 ESNATVYTSVI--ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT--VISGFCSKGDLA 374
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
AA +F+ + T ++ L + G +KEA ++ + ++G+ V Y +
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ CK E + ++V R P + + C +G + ELL + +KGL
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
L+ + +SL+ C +++A+ + ++E DV TY L+D L K G + A +
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNM 554
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + + S +++ ++++ C + K + ML+ +P+ TY ++ +
Sbjct: 555 LQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 142/347 (40%), Gaps = 43/347 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D ++++D Y +G ++ V+ M P V AL D L +Q ++R
Sbjct: 421 KGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRA 480
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVID 120
A+ L M G+ N +T++ + LC+ G E + ++ +G + V Y +ID
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLID 540
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G+F A + L EM + + + P +TY+ +++G + E +++ M+EK +
Sbjct: 541 TLCKSGEFDRAHNMLQEMLD-KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P V+ TY + M K+ C +K +K
Sbjct: 600 PN--------VV--------TYNSLM--KQYCIDK-------------------NMKSTT 622
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+IY + + + ++ Y + CK +E ++++E+G A S +
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
K K+ E + ++GL + S M+ + ++ I L
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITL 729
>gi|225443409|ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830 [Vitis vinifera]
gi|297735747|emb|CBI18434.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 187/422 (44%), Gaps = 31/422 (7%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALY--RQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+VY M +G+VP CN ++D L+ ++ E+ L +++ N T+S+
Sbjct: 145 FDVYEEMIAFGYVPNAFVCNVIIDVLFKIKRGEVAL------KFLKETRVSNFLTFSIAL 198
Query: 90 QILCR----SGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR G +V+ +L G SV ++++V++ + K G F AF L M +
Sbjct: 199 CNLCRLNDLVGVGDVLRMMLRKGYCPSVEIFSMVLNCFCKVGRFAEAFQVLGLMAT-LGI 257
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+ +S ++DG RR K + ++ MVE P + +I+ + G A
Sbjct: 258 PISVTVWSILIDGYRRIGKIGRAGNLLEKMVETGCSPN--VVTYTTLIKGFMESGMVSRA 315
Query: 205 EMIFK----RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ + + CD + L + C LSK GR +A+ I+ + +R + + +
Sbjct: 316 LDVLRIMGTKGCDYDLVLYNVLIDC----LSKVGRYDDALGIFFSLPKRKMVPDSYTFSS 371
Query: 261 FVNVLCKEHQPEEVCGLLRDVVE--RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ +C + + L +E + C LS F C G E + +LD
Sbjct: 372 ILSAICLSQRFSLLPKLFSSGLEVHTDLVVCNSLLSYF----CKAGFPSLAVEFYNDMLD 427
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+G ++D + L+ C + ++D+A+ ++ I LD + V++ GL K G+
Sbjct: 428 RGFMIDQYSFVGLLSGLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHR 487
Query: 379 AVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
AVR+F M E + + S+ + + L +A +++M + G P+ TY ++S
Sbjct: 488 AVRLFKKAMVERYTLDAVSYTVAIYGLLKGGRTGEACILYNQMKEAGLAPNAHTYNIILS 547
Query: 438 GF 439
F
Sbjct: 548 CF 549
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 168/427 (39%), Gaps = 85/427 (19%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + S+VL+C+ G F + +V +M G +V+ + L+D R +I
Sbjct: 220 KGYCPSVEIFSMVLNCFCKVGRFAEAFQVLGLMATLGIPISVTVWSILIDGYRRIGKIGR 279
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVID 120
A L MV G SPN T++ + + SG L +L G Y V+YN++ID
Sbjct: 280 AGNLLEKMVETGCSPNVVTYTTLIKGFMESGMVSRALDVLRIMGTKGCDYDLVLYNVLID 339
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
SK G + A + R + P T+SSIL + L LL
Sbjct: 340 CLSKVGRYDDALGIFFSLPK-RKMVPDSYTFSSILSA-------------ICLSQRFSLL 385
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKE 238
PK F SG +E+ D C +L K G
Sbjct: 386 PKLFSSG----------------------------LEVHTDLVVCNSLLSYFCKAGFPSL 417
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A++ Y+ + +RG + D Y+FV +L +
Sbjct: 418 AVEFYNDMLDRGFMI---DQYSFVGLL--------------------------------S 442
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
CG G+ E + S +L LD+ + ++ + +A+ L K + +L
Sbjct: 443 GLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHRAVRLFKKAMVERYTL 502
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
D +Y V + GL K GR EA +++ MKE + ++ ++ I++S C ++++ +
Sbjct: 503 DAVSYTVAIYGLLKGGRTGEACILYNQMKEAGLAPNAHTYNIILSCFCKERDMKMVKQMI 562
Query: 418 DEMLKMG 424
EM+ G
Sbjct: 563 QEMIAAG 569
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 45/289 (15%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I +G D ++++DC S G + D L ++
Sbjct: 321 IMGTKGCDYDLVLYNVLIDCLSKVGRYDDALGIFF------------------------- 355
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI---YSSVMYNLV 118
++ + + P+ +T+S + +C S +F ++ L SG+ V+ N +
Sbjct: 356 ----------SLPKRKMVPDSYTFSSILSAICLSQRFSLLPKLFSSGLEVHTDLVVCNSL 405
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS--SILDGARRYEKTEVSDRIVGLMVE 176
+ ++ K G A + N+M + + +S S L G+ R + E + G++V
Sbjct: 406 LSYFCKAGFPSLAVEFYNDMLDRGFMIDQYSFVGLLSGLCGSGRVD--EAVNVYSGILVN 463
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L H + +I L GK + A +FK+A E+ L + + L K GR
Sbjct: 464 HSDLDAHI---HTVIIGGLIKAGKFHRAVRLFKKAMVERYTLDAVSYTVAIYGLLKGGRT 520
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
EA +Y+ + E G+ Y ++ CKE + V ++++++ G
Sbjct: 521 GEACILYNQMKEAGLAPNAHTYNIILSCFCKERDMKMVKQMIQEMIAAG 569
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 188/434 (43%), Gaps = 29/434 (6%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y M G P N L+ +L N + A L+ M G PNKFT ++ + C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197
Query: 94 RSGKFEVVLGLLDS---GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
R+G+ + L +D G + V+YN ++ + K+ D ++L E + L P T
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQ-DMNDEAEKLVERMTEKGLLPDVVT 256
Query: 151 YSSILDGARRYEKTEVSDRIV-GLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
++S + R K + RI + ++ +L LPK + + +++ G A +
Sbjct: 257 FNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLV 316
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ + ++ L L + G++ E + + E GI Y ++ LC+
Sbjct: 317 ETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRN 376
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
H + L+ +V G P + + + C KGK E + +L+ ++ KG +++ C
Sbjct: 377 HMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTC 436
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-- 386
++L+ + +A + K+ + LD T +++++GL ++G +E+A + M
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWT 496
Query: 387 -------KELKV---------VSSS-----SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
KE V VS++ ++ +++ LC + +L +A K EM+
Sbjct: 497 DGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNL 556
Query: 426 KPDEATYKQVISGF 439
PD TY + F
Sbjct: 557 HPDSVTYDTFVLNF 570
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 179/434 (41%), Gaps = 60/434 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+L + +G+ + + M+ G ++ + N L L R ++ + M
Sbjct: 295 TFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEM 354
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDF 128
V +G+ PN +++++V LCR+ L+D +G+Y +V Y ++ Y KG
Sbjct: 355 VENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A LNEM + P T +++L+
Sbjct: 415 FEAKAILNEMIR-KGCHPNTYTCNTLLNS------------------------------- 442
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
L G+ AE + ++ ++ +L TC ++ L + G +++A ++ +SE
Sbjct: 443 ------LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEV---VSE 493
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRFVASQCGKGKWK 307
+ N L KE+ V GL+ + +P + + + C GK +
Sbjct: 494 M--------WTDGTNSLGKEN---PVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLE 542
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E ++ ++ K L DS + + +C +I A+ + +E+ S + TY+ L+
Sbjct: 543 EAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLI 602
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG-H 425
GL G++ E + D M+E + ++ +++ LC + + A EML G
Sbjct: 603 LGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVV 662
Query: 426 KPDEATYKQVISGF 439
P+ +++K +I F
Sbjct: 663 SPNVSSFKILIKAF 676
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 174/440 (39%), Gaps = 42/440 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+D + +D + +M G P LL + ++ A + M+R
Sbjct: 367 NIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR 426
Query: 76 DGVSPNKFTWSLVAQILCRSGK---FEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGA 130
G PN +T + + L + G+ E +L ++ Y +V N+V++ + G+
Sbjct: 427 KGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEK 486
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + ++EM + G + L + T V D I +
Sbjct: 487 ASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTL--------------- 531
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I L +GK A+ F + + T + K+G++ A+++ + G
Sbjct: 532 -INGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG 590
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y + + L + Q E+ GL+ ++ ERG P + + C GK K+
Sbjct: 591 CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDAT 650
Query: 311 ELLSAVLDKG----------LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
LL +LDKG +L+ +FC S + C + ++ H +
Sbjct: 651 SLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKE---------- 700
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
A Y ++ + L G++ +A +F+ E ++S + + ++ +LC L A +
Sbjct: 701 ALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQK 760
Query: 420 MLKMGHKPDEATYKQVISGF 439
++ G+ D +++ VI G
Sbjct: 761 LIDKGYCFDHSSFIPVIDGL 780
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
++++P V L D+++ G P + + S C EL + +KG + F
Sbjct: 128 QQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L+ +C R AL K+ G+++ Y+ L+ K +EA ++ + M
Sbjct: 188 TVGILVRGFC--RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERM 245
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH----KPDEATYKQVISGF 439
E ++ +F +S LC ++ +A + +M G KP+ T+ ++ GF
Sbjct: 246 TEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGF 303
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 189/431 (43%), Gaps = 46/431 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+++VL G + + + R M P + + N L++ L + +++ A L M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFG 129
G PN T + + LC+ G+ + + LL++ G + V+Y +I + G+
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ +EM G+ ++ TYS ++ G R + + ++ ++ M E + P D
Sbjct: 121 RGKELFDEML-GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP-------D 172
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V TY ++ L K+GR A+ + +L+ E+
Sbjct: 173 VV---------TYTG---------------------LIDGLCKDGRATHAMDLLNLMVEK 202
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + Y ++ LCKE + +LR ++E+G + + + C KGK E
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 262
Query: 310 EELLSAVLDKGLLLDS--FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+L +++ D L+ F + L+ C ++ KA+ +H K+ K ++ TY++LL
Sbjct: 263 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 322
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G K G+++EA+ ++ + +L V +S ++ I++ C ++ L A EM G
Sbjct: 323 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 382
Query: 427 PDEATYKQVIS 437
P Y +++
Sbjct: 383 PALFDYNTLMA 393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 184/414 (44%), Gaps = 23/414 (5%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P C L+D L + + A L AM + G + + + C +G
Sbjct: 59 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E+ +L GI ++V+ Y+ ++ + G + A LN M + P TY+
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE-HGIHPDVVTYT 177
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++DG + + + ++ LMVEK P + + ++ L G A I +
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY--NVLLSGLCKEGLVIDAFKILRMMI 235
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI--SERGITVRDSDYYAFVNVLCKEHQ 270
++ + T ++K L +G+V EA+++++ + +E + + + LCKE +
Sbjct: 236 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 295
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ + R +V++G + + + GK KE EL VLD G + +SF S
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK--- 387
L++ +C R ++ A L ++ + + Y+ L+ L K+G +E+A +F M
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415
Query: 388 -ELKVVSSSSFV---IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
E ++S ++ + + +KEL+ +M++MG +PD T+ +I+
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQM------KMVEMGLRPDALTFSTLIN 463
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 169/362 (46%), Gaps = 11/362 (3%)
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCN 140
++V + LCR+G +GL+ SV YN +I+ K A L EM
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-E 60
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
P T ++++DG + + + + ++ M +K L G +I + G
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT--LISGFCNNGN 118
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ +F + I T C++ L + G+ KEA + + ++E GI Y
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK+ + LL +VE+G P + + ++ C +G + ++L +++KG
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEE 378
D ++LM+ C ++D+A+ L + + L +V T+++L+ GL K+GR+ +
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298
Query: 379 AVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
AV+I M K+ + ++ +++ ++++AM+ ++L +G P+ TY +I
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358
Query: 438 GF 439
GF
Sbjct: 359 GF 360
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 179/474 (37%), Gaps = 95/474 (20%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D G + +E+ M+ GF V L+ + L+ M+
Sbjct: 72 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 131
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G+S N T+S + LCR G+++ V+ + + GI+ V+ Y +ID K G
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D LN M + P TY+ +L G + + +I+ +M+EK K + +
Sbjct: 192 AMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG--KKADVVTYNT 248
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGR------------- 235
+++ L D GK A +F D + L+ + T ++ L KEGR
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308
Query: 236 ----------------------VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+KEA++++ + + G Y ++ CK
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 368
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
GL ++ G P + + +AS C +G ++ + L +
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM----------------- 411
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-- 391
N + D+ +++ ++DG K G F ++KEL++
Sbjct: 412 ---GNANCEP---------------DIISFNTMIDGTLKAGD-------FQFVKELQMKM 446
Query: 392 ------VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +F +++RL L EL +A + M+ G PD Y ++ G
Sbjct: 447 VEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 14/344 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + +++L +GL +D ++ RMM G V N L+ L + ++
Sbjct: 202 KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDE 261
Query: 66 ASCLYGAMV--RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLV 118
A L+ +M + + PN FT++++ LC+ G+ + + + V YN++
Sbjct: 262 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNML 321
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ K G A + ++ + P TYS ++DG + ++ + M
Sbjct: 322 LGGCLKAGKIKEAMELWKQVLD-LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380
Query: 179 LLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L P F DY ++ L G A+ +F+ + E + M+ K G
Sbjct: 381 LNPALF----DYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ ++ + E G+ + +N L K + +E L +V G+ P A+
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ KG E+ LL + KG +LD S+++ C + Q
Sbjct: 497 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ 540
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 8/259 (3%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G ++++R M G + N LL + +I+ A L+ ++ G PN FT
Sbjct: 293 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
+S++ C+ + GL G+ ++ YN ++ K+G A EM
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
N N P ++++++DG + + + MVE L P +I +LS +G
Sbjct: 413 NA-NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST--LINRLSKLG 469
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A+ +R +LK LS +G E I + H ++ +G +
Sbjct: 470 ELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVS 529
Query: 260 AFVNVLCKEHQPEEVCGLL 278
+ LC Q +V LL
Sbjct: 530 TILTCLCHSIQEVDVMELL 548
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 148/327 (45%), Gaps = 8/327 (2%)
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI---YSS--VMYN 116
++ LA + G M++ G P++ T + CR + + L+D + Y V YN
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID K AFD E+ + + P TY+++++G + + R++ M++
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
KK+ P ++ GK A+ +F+ I+ T ++ L R+
Sbjct: 254 KKITPNVITYS--ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRI 311
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA Q++ L+ +G Y +N CK + E+ L R++ +RG + + +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G + +E S + G+ D + + L+ C N +++KA+ + ++K +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIF 383
LD+ TY ++ G+ K G++EEA +F
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ + RV +A+ + + E G Y A ++ LCK + + +++
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+G P + + V C +W + LLS ++ K + + S+L++ + N ++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+A L ++ ++ D+ TY L++GL R++EA ++FD M ++ S+ +
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C K + MK EM + G + TY +I GF
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 141/329 (42%), Gaps = 8/329 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + + M G+ P + A NA++D+L + + A + + R G+ PN T++ +
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC S ++ LL I + N++ +D + K G A + EM ++
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSI 291
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TYSS+++G +++ + ++++ LMV K L + + +I +
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD--VVSYNTLINGFCKAKRVEDG 349
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+F+ + T +++ + G V +A + + + GI+ Y +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + E+ + D+ +R + + + C GK +E L ++ KGL D
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+++M C+ + + AL+ K+++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ +L K RV +A + I +GI Y A VN LC + + LL D++++
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + S + + GK E +EL ++ + D SSL+ C + +ID+A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEAN 315
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--------- 395
+ + KG L DV +Y+ L++G K R+E+ +++F M + +VS++
Sbjct: 316 QM-FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 396 ---------------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
++ I++ LC EL KA+ ++M K D
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 429 EATYKQVISG 438
TY VI G
Sbjct: 435 IVTYTTVIRG 444
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 256 SDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+D Y F +N C Q +L +++ GY P + + V C + + + L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ +++ G D +++++ C ++++ A +IE+ +V TY L++GL
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
R +A R+ M + K+ + ++ ++ ++ +A + +EM++M PD T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 432 YKQVISGF 439
Y +++G
Sbjct: 298 YSSLVNGL 305
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L +L G D SL+ +C ++ A++L K+ ++ D+ Y+ ++D L
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 372 KDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K R+ +A FD+ KE++ + ++ +V+ LC+ A + +M+K P
Sbjct: 202 KTKRVNDA---FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 428 DEATYKQVISGFM 440
+ TY ++ F+
Sbjct: 259 NVITYSALLDAFV 271
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 178/397 (44%), Gaps = 10/397 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGV-SPNKFTWSLVAQILCRSGKFEVVLGLL---- 105
L+ L+ +N+++ A L+ +VR+ + PN+ + V LC+ G + LL
Sbjct: 146 TTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLME 205
Query: 106 -DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
S ++ Y +VID + K G A LNEM +++ P TYS+++D + +
Sbjct: 206 QGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM-KQKSIPPDIFTYSTLIDALCKLSQW 264
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E + M+ + P + + VI L GK AE I + ++ ++ T
Sbjct: 265 ENVRTLFLEMIHLNIYPN--VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ G+V A +I+ + + I Y +N ++ + +E + R++ ++
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + + + G+ K + +L G + D + +L+ Y N +++A
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
++ K+E+ + ++ Y ++DGL K+G++++A F+ + + + ++ ++S
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C L +A +M G D TY ++ GF+
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 172/367 (46%), Gaps = 16/367 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+D + G+ + M+ P + + L+DAL + ++ L+ M+
Sbjct: 217 TIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH 276
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
+ PN T++ V LC+ GK E ++ +++ G+ V+ YN++ID Y +G
Sbjct: 277 LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDR 336
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + + M N +++ P +Y+ +++G R +K + + ++ + +K L P + +
Sbjct: 337 AREIFDSMIN-KSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPS--IVTCNV 393
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKI---ELQDDTCGC-MLKALSKEGRVKEAIQIYHLI 246
++ L ++G+T +A+ F DE + + D C +L K G V+EA+ +H +
Sbjct: 394 LLHGLFELGRTKSAQNFF----DEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
R Y A ++ LCK + ++ + G P + + ++ C +G
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E +++L + D G L D+ + ++ + + ++ + A +I S + AT ++L
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569
Query: 367 LDGLFKD 373
+D + +D
Sbjct: 570 MDIIAED 576
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 180/437 (41%), Gaps = 46/437 (10%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
RD S S+V D +G E M GF P V + N ++ + I A
Sbjct: 171 RDRLSVKSSIVFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 228
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFY 122
+ AM G+ P+ +T+ + +C+ G+ E GL D + ++V YN +ID Y
Sbjct: 229 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 288
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
KGD AF +EM + + P STY+ ++ + +D ++ M +K ++P
Sbjct: 289 CNKGDLERAFSYRDEMVK-KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
T ++ S+ G K A +
Sbjct: 348 AI-------------------------------------TYNILINGYSRCGNAKRAFDL 370
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
++ + +GI Y + + VL + ++ +E L ++++G P + + + C
Sbjct: 371 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCA 430
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G + LL + K + D ++LM+ C ++++A L +++ D +
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L+ G + G +++A + D M + + ++ ++ LC +E A + EM+
Sbjct: 491 YNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 550
Query: 422 KMGHKPDEATYKQVISG 438
G PD++TY +I G
Sbjct: 551 NKGISPDDSTYLSLIEG 567
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
MI+ + DA++ ++++ YS G +++ M G P +L+ L
Sbjct: 335 MIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLS 394
Query: 59 RQNEIRLASCLYGAMVRDGVS-----------------------------------PNKF 83
R+N ++ A L+ ++ GVS P++
Sbjct: 395 RRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEV 454
Query: 84 TWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + Q CR GK E LLD GI + YN +I Y ++GD AF +EM
Sbjct: 455 TFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ P TY++++ + ++ ++++ ++ MV K + P
Sbjct: 515 LS-IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 556
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI--VVSRLCHLK 408
+E L +V +Y+ ++ G G +E A RI D M+ +K + S+ ++S +C
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR-VKGIEPDSYTYGSLISGMCKEG 257
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +A D+M+++G P+ TY +I G+
Sbjct: 258 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 288
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 179/431 (41%), Gaps = 36/431 (8%)
Query: 6 EGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
E R + L S++++ Y+ G F D ++ +R++R + +C L D L + N
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
A Y ++ G P+ ++++ LC+ K L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF------------------ 248
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
G+ G R L P +++++++G + + R+ M+E ++ P
Sbjct: 249 --GEIGK-----------RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDV 295
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
F +I L G+ A +F CD + D T ++ GR ++IY
Sbjct: 296 FTY--SVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIY 353
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ +G+ Y +N LCK E L+ ++ +RG P + + C +
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G + E+ ++ +G+ LD+ ++L+ +C Q+ +A ++ + D ATY
Sbjct: 414 GDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATY 473
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+++ G K G ++ ++ M+ + V ++ ++++ LC +++ A D ML
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLN 533
Query: 423 MGHKPDEATYK 433
+G PD+ TY
Sbjct: 534 LGVVPDDITYN 544
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 40/344 (11%)
Query: 106 DSGIYSSVM--------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT-PGFSTYSSILD 156
DSG +S + +NL I F+S G FDRL ++ NLT P ++ Y ILD
Sbjct: 167 DSGYFSDAIQCFRLVRKHNLQIPFHS----CGYLFDRLMKL----NLTSPAWAFYEEILD 218
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + ++ +L K A+++F +
Sbjct: 219 CGYPPDVCKF----------------------NVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ K G + + ++ + E + Y +N LCKE Q ++
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++ +RG +P + + + C G+ E+ +L KG+ D ++L+ C
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSS 395
+ +A L I++ + D TY +L+DG K+G +E A+ I M KE + +
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++S C ++ +A + EML+ G KPD+ATY VI GF
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+D G A F+ +++ +CG + L K A Y I + G
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ ++ LCKEH+ E L ++ +RG P + + + C G + L
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+++ + D F S L+ C Q+D A L +++ + T+ L++G GR
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+ + I+ M V ++ +++ LC + +LR+A K EM + G KPD+ TY
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 435 VISG 438
+I G
Sbjct: 406 LIDG 409
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 180/423 (42%), Gaps = 13/423 (3%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ D + +Y+ M + G P N L++ N++ + G M+R G SPN T++
Sbjct: 108 YFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTS 167
Query: 88 VAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + LC + GLL + + V Y +++ G+ A EM NG
Sbjct: 168 LVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGN 227
Query: 143 -----NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
+ P Y +I+D + + + M + + P + +I +
Sbjct: 228 GGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPD--VVAYSSIIHGMCH 285
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A+ +F DE + T ++ AL K G+++EA + L+ +RG +
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFT 345
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ C E + ++ L + +G A+ + + C G+ E ++L ++
Sbjct: 346 YNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMM 405
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
K ++ ++L+ ++ A L +++ + + TY++LLDGL K+ +
Sbjct: 406 CKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLS 465
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA+ +F Y++ S F ++ LC +++ A + + + G +P+ TY +I
Sbjct: 466 EAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525
Query: 437 SGF 439
G
Sbjct: 526 HGL 528
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 182/441 (41%), Gaps = 21/441 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++CY + GL V M G P +L+ L + I A+ L M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL------DSGIYSSVMYNLV-----IDFY 122
VR G PN T+ + LC +G + + L + G ++ NLV ID
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G + EM GR ++P YSSI+ G + E + + MV++ + P
Sbjct: 249 CKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I L GK A + K T ++ EGR+ +A +
Sbjct: 308 --VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + +GI Y +N CK + E L R+++ + +P + + +
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+GK ++ L + L +S + L++ C N + +A+ L +E +
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQI 485
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
++ L+DGL K ++E A +F+ + E V+ ++ +++ LC +L A
Sbjct: 486 FNCLIDGLCKARKIEIARELFNRLSHEGLEPNVI---TYTVMIHGLCKSGQLENAKDLFL 542
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M + G P+ T+ ++ GF
Sbjct: 543 GMEEKGCAPNLVTFNTLMRGF 563
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 161/371 (43%), Gaps = 8/371 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D GL G E++ M+ G P V A ++++ + A L+ MV +G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAF 132
V PN T++++ LC++GK E LL I + YN +ID + +G A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D M + + +Y+ +++G + + + ++ M+ K+++P + + ++
Sbjct: 364 DLFVSM-ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPT--VITYNTLL 420
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L GK A +F + + T +L L K + EA++++H +
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ ++ LCK + E L + G P + + + C G+ + ++L
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ +KG + ++LM +C N ++ K + L ++ + S D +T +++D L K
Sbjct: 541 FLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600
Query: 373 DGRMEEAVRIF 383
D + E + +
Sbjct: 601 DEKYREYLHLL 611
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 162/358 (45%), Gaps = 8/358 (2%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDS 107
++D+L + I L+ M G+SP+ +S + +C +G++E GL +D
Sbjct: 243 TIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDE 302
Query: 108 GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
G++ +V+ +N++ID K G A L M R +P TY++++DG + +
Sbjct: 303 GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ-RGESPDTFTYNTLIDGFCLEGRIDD 361
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ R + + +E K + +S N +I G+ A+ +++ ++I T +
Sbjct: 362 A-RDLFVSMESKGIETDAVSYN-VLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L L +EG+V++A ++ + +T Y ++ LCK + E L + +
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDF 479
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + + C K + EL + + +GL + + ++ C + Q++ A
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
L + +E+ + ++ T++ L+ G ++ M++ V + M E +S + +V L
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL 597
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 43/356 (12%)
Query: 6 EGRDSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+GR D A S ++ H G + ++ M G P V N L+DAL + ++
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKM 324
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLV 118
A+ L M++ G SP+ FT++ + C G+ + + + + GI + +V YN++
Sbjct: 325 EEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVL 384
Query: 119 IDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
I+ Y K G A EM C + + P TY+++L G R K + + G M
Sbjct: 385 INGYCKSGRMVEAKKLYREMMC--KEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442
Query: 178 KLLPK------------------------HFLSGNDY---------VIQKLSDMGKTYAA 204
L P+ H+L +D+ +I L K A
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+F R E +E T M+ L K G+++ A ++ + E+G + +
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
C+ + ++V LL+++ E+ + P A +S V K++E LL +G
Sbjct: 563 FCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 4 SCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
S E + ++DA+S ++++ Y G ++ ++YR M +P V N LL L+R+
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYN 116
++R A L+G M ++P T++++ LC++ + L + S+ ++N
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFN 487
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID K A + N + + L P TY+ ++ G + + E + + M E
Sbjct: 488 CLIDGLCKARKIEIARELFNRLSH-EGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEE 546
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
K P L + +++ + + + ++ T ++ LSK+ +
Sbjct: 547 KGCAPN--LVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604
Query: 237 KEAIQIYHLISERGITVR 254
+E + + +G T R
Sbjct: 605 REYLHLLPTFPAQGQTGR 622
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 9/221 (4%)
Query: 227 LKALSKEGRVK--EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
LK+ K G +K EA +++ + + T S + + + K + +V L + +
Sbjct: 62 LKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLI 121
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + L+ + C K +L +L +G ++ +SL++ C +I +A
Sbjct: 122 GLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEA 181
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFV-- 398
L K+ ++ +V TY LL+GL G AV++ + M V + V
Sbjct: 182 TGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCY 241
Query: 399 -IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ LC + K + EM G PD Y +I G
Sbjct: 242 CTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 172/413 (41%), Gaps = 46/413 (11%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY M G P V N L+ AL R +++R A + M V+P++ T++ + Q
Sbjct: 182 VYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFI 241
Query: 94 RSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN-EMCNGRNLTPG 147
G E L ++++G + V N++I+ Y K G A + E+ +G P
Sbjct: 242 EEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADG--FEPD 299
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY++ + H L N +V L M +++
Sbjct: 300 QVTYNTFV---------------------------HCLCQNGHVSHALKVM------DLM 326
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ D + + C LSK G + EA I + + +RG + + + LC
Sbjct: 327 LQEGHDPDVFTYNTVINC----LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCS 382
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+++ EE L R++ +G P + + + C G L + G D
Sbjct: 383 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVT 442
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ L+++ CS ++ A+ L ++E TY+ ++D L K R+EEA +FD M
Sbjct: 443 YNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ +F ++ LC K + A + ++M+K G +P TY +++ +
Sbjct: 503 AHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHY 555
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 173/432 (40%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++++ Y G D L + GF P N + L + + A + M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKGDF 128
+++G P+ FT++ V L ++G+ + +V ++D G + + +N +I +
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D E+ + L+P T++ +++ + + R+ M P
Sbjct: 387 EEALDLAREL-TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTY-- 443
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L MGK A + K T ++ AL K+ R++EA +++ +
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI+ + ++ LCK + ++ L+ +V+ G P + + + C +G K+
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++L + G +DV TY L++
Sbjct: 564 AADILETMTANGF-----------------------------------EIDVVTYGTLIN 588
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR + A+++ M+ + + ++ V+ L LR A+ EM ++G P
Sbjct: 589 GLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPP 648
Query: 428 DEATYKQVISGF 439
D TYK V G
Sbjct: 649 DALTYKIVFRGL 660
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 179/408 (43%), Gaps = 25/408 (6%)
Query: 44 VPAVSACNALLDALYRQNEIRLA-SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
V A+S + LL AL Q + A L A+ R+ +P++ + + Q L +G F+++
Sbjct: 50 VYAISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLME 109
Query: 103 GLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
GL+ +G+ S ++ Y++ F A D + N + + Y+
Sbjct: 110 GLVREMRREGHEAGAGVVRS-----FVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYN 164
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L+ + ++ + + M ++ + P + + +I+ L + A ++ +
Sbjct: 165 HLLNVLAEGSRMKLLESVYNEMTDRGIQPD--VVTLNTLIKALCRAHQVRTAVLMLEEMS 222
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + T +++ +EG ++ A+++ + E G + +N CK + E
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ G ++ + G+ P + + FV C G +++ +L +G D F ++++
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
N ++D+A + ++ D T++ L+ L R+EEA+ D +EL V
Sbjct: 343 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL---DLARELTVK 399
Query: 393 SSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
S +F I+++ LC + + ++ +EM G PDE TY +I
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILI 447
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWKEVEELLS 314
SD + L ++ PE +L + R + P + G + +E L+
Sbjct: 54 SDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVR 113
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-HIKIEKLKGSLDVATYDVLLDGLFKD 373
+ +G + S +E Y R+ D A+ L ++ D A Y+ LL+ L +
Sbjct: 114 EMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEG 173
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
RM+ +++ M + + + ++ LC ++R A+ +EM PDE T+
Sbjct: 174 SRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTF 233
Query: 433 KQVISGFM 440
++ GF+
Sbjct: 234 TTLMQGFI 241
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 190/470 (40%), Gaps = 51/470 (10%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN--------- 61
+ +A V+ YS G + + V MM+ G P +S CN + L N
Sbjct: 231 RPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFL 290
Query: 62 ------EIRLASCLYGAMVR--------------------DGVSPNKFTWSLVAQILCRS 95
EI Y +++ G SP+K ++ V LC+
Sbjct: 291 ERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKE 350
Query: 96 GKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ + V L++ + S V YN + SK G A + L E R
Sbjct: 351 KRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE-AEERRFRVDKV 409
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
YS+I+ R + + + IV M K +P + VI L K A+ + +
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD--VVTYTSVINGLCQERKVDQAKKMLR 467
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + + +L L K G EA ++ ++ E Y ++ +E
Sbjct: 468 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREG 527
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E C L+R+++++G+ P +E++ + S C + K E + + L+ G ++ +
Sbjct: 528 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 587
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+++ +C ++ A++L + DV TY ++D L K GR+EEA ++ MK L
Sbjct: 588 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKL--AMKML 645
Query: 390 KV---VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+V + ++ V+ + C + + +K ++ML + Y QVI
Sbjct: 646 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVI 693
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 2/252 (0%)
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
YV+ S GK A + IE C + L R+ +A++ +
Sbjct: 237 YVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIV 296
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
I Y + C H+ E+ L+ ++ +G P + + C + + KEV
Sbjct: 297 EIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEV 356
Query: 310 EELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L+ +L D LL D ++ + + D+A+ + E+ + +D Y ++
Sbjct: 357 RLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVH 416
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
++GRM++A I + M + ++ V++ LC +++ +A K +M K G KP
Sbjct: 417 SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKP 476
Query: 428 DEATYKQVISGF 439
+ +Y +++G
Sbjct: 477 NTVSYTALLNGL 488
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 42/273 (15%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDSDYYAFV 262
AEM FK +KI ++ L KE R+KE + + ++ + + Y FV
Sbjct: 326 AEMPFKGCSPDKISYY-----TVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFV 380
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
++L K +E LR+ ER + + S V S C +G+ + +E+++ + KG +
Sbjct: 381 HMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI 440
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA--- 379
D +S++ C R++D+A + ++ K + +Y LL+GL K+G EA
Sbjct: 441 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 500
Query: 380 -----------------VRIFDYMKELKVVSSSSFV----------------IVVSRLCH 406
V + + +E K + V +++ LC
Sbjct: 501 MNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 560
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +A + ++ L G + + VI GF
Sbjct: 561 EEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 593
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 10/224 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ + +G + ++ R M GF P N L+ +L ++ ++ A +
Sbjct: 517 SVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLN 576
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
+G + N ++ V C+ E L LLD S+ V Y +ID KKG
Sbjct: 577 NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEE 636
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M L P TY +++ R + E + ++EK L + + +
Sbjct: 637 ATKLAMKMLRV-GLIPTPVTYRTVIHQYCRMGRVEDLLK----LLEKMLSRQECRTAYNQ 691
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VI+KL G A + + ++ +TC ++++ +G
Sbjct: 692 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 735
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 181/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A N ++D +++ ++ A L+ MV+ G+ P+ T+S V
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM +++
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSIL 321
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P T++ ++ +Y K + + + M K P F + N Y + L DM
Sbjct: 322 PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD- 380
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 381 -----LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTV 435
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G P + C G + +EL+S +++ G+
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD SS++ C ++ A + + Y +L+DG G+ME+A+R
Sbjct: 496 HLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 183/432 (42%), Gaps = 34/432 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G++ + +++L+ Y+ KG +D +++ +M G P + N L+ A +
Sbjct: 353 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDK 412
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A ++ M GV PN T++ V LCR GK + + + +++
Sbjct: 413 AMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM-----------------EKFNQM 455
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A D+ C L GF T+ S+L +E+ + G+ ++ L
Sbjct: 456 IDQGVAPDKYAYHC----LIQGFCTHGSLLKAKELI--SEIMNN--GMHLDIVLFSS--- 504
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I L +G+ A+ IF + + ++ G++++A++++
Sbjct: 505 -----IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI D Y VN CK + +E L R+++++G P + + + G+
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ ++ S ++ NR D+AI L ++ + +D+ T +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++ G+F+ R+EEA +F + +V ++ I+++ L + +A M G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 425 HKPDEATYKQVI 436
+PD V+
Sbjct: 740 CEPDSRLLNHVV 751
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 154/383 (40%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 92 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANH 151
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K CD+ Q D
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 222 --TC-------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C ++ KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V +G +P + + G+WKE + + + +L D + LM
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG----------------------- 369
C +I +A + + + DV +Y+++L+G
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 370 --------LFKD----GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
L K G +++A+ IF+ M++ V + ++ V++ LC + ++ AM+
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGF 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 167/408 (40%), Gaps = 39/408 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDF 128
+ GV+P+K+ + + Q C G E++ ++++G++ V+++ +I+ K G
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG- 187
A + + N L P YS ++DG K E + R+ MV + P + G
Sbjct: 516 MDAQNIFDLTVN-VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 188 --NDY------------------------------VIQKLSDMGKTYAAEMIFKRACDEK 215
N Y +I L + G+T A++ F +
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I + T +L+ L K EAI ++ + + + + + + + EE
Sbjct: 635 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 694
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L + G +PC + S + + +G +E E++ S++ + G DS + ++
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 755 LKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 191/434 (44%), Gaps = 55/434 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
VL+ +GLF LE Y + + P V N ++ A+ + + A ++ M
Sbjct: 167 VLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMT 226
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFG 129
P+ +T+ + LC++ + + + LLD G + S V +N++I+ KKGD
Sbjct: 227 IRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLS 286
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A ++ M + P TY++++ G K E + ++ MV K +P
Sbjct: 287 RAAKLVDNMF-LKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVV----- 340
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
T G ++ L K+GR + + L+ ER
Sbjct: 341 --------------------------------TYGTIINGLVKQGRALDGACVLALMEER 368
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G V + Y ++ L KE + +E L +++ +GY + S + C GK +
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E+LS + +KG +++ CSSLM+ + +A+ + + K + + Y VL+ G
Sbjct: 429 VEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHG 488
Query: 370 LFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG- 424
L KDG+++EA+ ++ M + VV+ SS +++ L + AM+ ++EML G
Sbjct: 489 LCKDGKVKEAMMVWTQMLGKGCKPDVVAYSS---MINGLSIAGLVEDAMQLYNEMLCQGP 545
Query: 425 -HKPDEATYKQVIS 437
+PD TY +++
Sbjct: 546 DSQPDVVTYNILLN 559
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 178/429 (41%), Gaps = 52/429 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+LV+ GL D ++V+R M + P V L+D L + + I A L M
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDF 128
DG P+ T++++ LC+ G L+D+ I + V YN +I KG
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+ M + + P TY +I++G + + ++ LM E+ N
Sbjct: 321 EKAISLLDRMVSSK-CVPNVVTYGTIINGLVKQGRALDGACVLALMEERG------YCVN 373
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+YV L + L KEG+ +EA+ ++ ++
Sbjct: 374 EYVYSTL-------------------------------ISGLFKEGKSQEAMHLFKEMTV 402
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G + Y A ++ LC++ +P++ +L ++ +G P A S + G
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+ + + C S L+ C + ++ +A+ + ++ DV Y +++
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMIN 522
Query: 369 GLFKDGRMEEAVRIFDYM------KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
GL G +E+A+++++ M + VV ++ I+++ LC + +A+ + ML
Sbjct: 523 GLSIAGLVEDAMQLYNEMLCQGPDSQPDVV---TYNILLNTLCKQSSISRAIDLLNSMLD 579
Query: 423 MGHKPDEAT 431
G PD T
Sbjct: 580 RGCDPDLVT 588
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-EL 389
+++ C +D AI + + K DV TY L+DGL K R++EAV + D M+ +
Sbjct: 205 VIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG 264
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S +F ++++ LC +L +A K D M G P+E TY +I G
Sbjct: 265 CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGL 314
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 104/243 (42%), Gaps = 41/243 (16%)
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLISERGITVRDS--DYY 259
A ++ + AC+ + + + +L + +EG A++ Y H+I +G+++ + +
Sbjct: 144 AVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFN 203
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ +CK ++ + RD+ R P
Sbjct: 204 LVIKAMCKVGLVDDAIQVFRDMTIRKCEP------------------------------- 232
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
D + +LM+ C +ID+A++L +++ T++VL++GL K G + A
Sbjct: 233 ----DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRA 288
Query: 380 VRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
++ D M LK + + ++ ++ LC +L KA+ D M+ P+ TY +I+
Sbjct: 289 AKLVDNM-FLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIIN 347
Query: 438 GFM 440
G +
Sbjct: 348 GLV 350
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ +G + + S V+D G D +EV M G P C++L+ +
Sbjct: 401 TVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLV 118
A ++ M + + N+ +S++ LC+ GK + V +L G V+ Y+ +
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520
Query: 119 IDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILD 156
I+ S G A NEM C G + P TY+ +L+
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLN 559
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 203/476 (42%), Gaps = 46/476 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++ C+ KG + +M + P V A N L++A +
Sbjct: 272 DGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD 331
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVID 120
A M+++G P+ T+S + C G ++ G+ + G+ +V MYN ++
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMS 391
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK--------------TEV 166
Y K D A + L E + + P +T++ ++ G +Y K + V
Sbjct: 392 GYFKARDVCQA-NMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLV 450
Query: 167 SD------RIVGL---------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
D + GL M+EK + P + + VI S G A
Sbjct: 451 PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPS--VVAFNSVIAAYSRAGFEDNAH 508
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+K + TC ML LSK+GR++EA + + + ++G+ V + ++
Sbjct: 509 KAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGY 568
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
K L ++ RG P A+ S F+ G +E E S + KG + ++
Sbjct: 569 FKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFD 384
F +SL+ C+ ++ +A+ L ++ + KG L D+ T +++++G K+GRM+ A F
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQ-KGLLPDIFTTNIIINGFCKEGRMKSAFDAFA 687
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + V + ++ ++ C + ++ A + ++M G PD TY I GF
Sbjct: 688 EMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGF 743
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 36/376 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G A + V+ YS G + + Y++M ++G VP+ S C+++L L ++ ++
Sbjct: 482 KGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQE 541
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M+ G+ NK V + +++D Y K
Sbjct: 542 ARDLLYKMIDKGLPVNK------------------------------VAFTVLLDGYFKV 571
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
GD A EM R + P +S+ +DG + E + M +K +P +F+
Sbjct: 572 GDTAGAHSLWYEM-EARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFV 630
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYH 244
+ +I L + GK + A + +R +K L D T ++ KEGR+K A +
Sbjct: 631 YNS--LIHGLCNCGKLHEA-LKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFA 687
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+T Y + CK L + G+ P + + C
Sbjct: 688 EMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQ 747
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K +L ++ G++ ++ +++M C++ +D+A+ L K+ K+ +V T +
Sbjct: 748 KISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTN 806
Query: 365 VLLDGLFKDGRMEEAV 380
VLL K G E+A+
Sbjct: 807 VLLSHFCKQGMPEKAL 822
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 20/265 (7%)
Query: 185 LSGNDYVIQKLSDMGKTYAAEMI-FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
L D + + +G + +A ++ F A K E +++ E+++I
Sbjct: 172 LLAQDVISWVIRRIGASRSAHLVEFMWANHHKYESDFSILNTLMRGFMNSEMAYESLEIL 231
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ E G+ S +L + V LLR ++ G PC + + C K
Sbjct: 232 SRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQK 291
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSS--------LMEYYCSNRQIDKAIALHIKIEK-L 354
G + E LL ++ FCC + Y R D LH+ I+
Sbjct: 292 GYLRVAESLL-------FVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGC 344
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKA 413
K SL T+ ++ +G + EA +IF+ ++E+ + + + + ++S +++ +A
Sbjct: 345 KPSL--ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQA 402
Query: 414 MKNHDEMLKMGHKPDEATYKQVISG 438
++EM G PD AT+ +++G
Sbjct: 403 NMLYEEMRDKGIAPDGATFNILVAG 427
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 201/454 (44%), Gaps = 36/454 (7%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S+A S++++ YS G+ +E + +MR + P + A N +L L R+ LA +Y
Sbjct: 128 SEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYN 187
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID-FYSKK 125
M++ ++P+ T+ ++ LC++ K + L L D GI + ++Y++V+ K
Sbjct: 188 QMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAK 247
Query: 126 GDFGAA--FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK- 182
F A F ++ R+L TY+ +L+G + K+ D L+ +LL K
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLI----TYNVLLNG---FCKSGYLDDAFTLL---QLLTKD 297
Query: 183 -HFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
H L Y +I L + A M +++ E I+ M++ LS+EGRV EA
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + ++ERG+ Y A + C +E L ++ + P S +
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS-- 357
C G + + + + G L +SL+ C ++++A L ++E ++
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 358 -----------LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
D+A+ V+++ L + G + +A ++ + + V+ ++ I+++ C
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A K EM GH PD TY +I G
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/454 (18%), Positives = 187/454 (41%), Gaps = 60/454 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L+ + G D + +++ G + V L++ L+R A Y M+R
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGA 130
+ + P+ ++++ + L + G+ L LL + G+ ++ YN +I + G
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L + + P TYS ++ G + + I M + LP + +
Sbjct: 392 A-ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPS--VVTFNS 448
Query: 191 VIQKLSDMGKTYAAEMIF---------------KRACDEKIELQDDTCGCMLKALSKEGR 235
+I L + A ++F + D+ ++ + M++ L + G
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA--SLQVMMERLCESGM 506
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ +A ++ + + G+ Y +N CK L +++ +G++P ++
Sbjct: 507 ILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGT 566
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI---- 351
+ G+ ++ E+ ++ KG + +S ++M + C I A+++ +K
Sbjct: 567 LIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDF 626
Query: 352 -----------------EKLKGSL-------------DVATYDVLLDGLFKDGRMEEAVR 381
E+L+ ++ D+A Y + L GL + R EA
Sbjct: 627 RGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFA 686
Query: 382 IFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
IF +K+ K+ +SS+S V+++ RLC ++ L AM
Sbjct: 687 IFSVLKDFKMNISSASCVMLIGRLCMVENLDMAM 720
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 183/441 (41%), Gaps = 45/441 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S ++ VL+ GL V+ M V G VP S+ ++ +R +I+
Sbjct: 777 QGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQE 836
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVID 120
A M++ G P+ T +L+ LC +G + ++D G +++ + +ID
Sbjct: 837 ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 896
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
KKG AF+ L EM NG P T+++++DG + TE + R+ +V
Sbjct: 897 GLCKKGSIKQAFEMLEEMVRNG--WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR--- 951
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
TY + T M+ KE ++ A
Sbjct: 952 -------------------SDTYKPNV--------------HTYTSMIGGYCKEDKLNRA 978
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + E+G+ + Y +N CK L+ + + G++P + + S
Sbjct: 979 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 1038
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C K + E ELL+ GL D + L++ C I++A+A ++ K D
Sbjct: 1039 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 1098
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHD 418
+ ++L+ + +M+E+ R+F + L ++ + ++ ++S C ++ A+K
Sbjct: 1099 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 1158
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M + G PD TY +ISG
Sbjct: 1159 NMKRHGCVPDSFTYGSLISGL 1179
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 164/418 (39%), Gaps = 55/418 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+L GL + +R M GF P + +L+D L ++ I+ A + MVR
Sbjct: 857 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 916
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDS------------------------ 107
+G PN +T + + LC+ G F + L L+ S
Sbjct: 917 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 976
Query: 108 ------------GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
G++ +V Y +I+ + K G FG A++ +N M + P TY++
Sbjct: 977 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD-EGFMPNIYTYNAA 1035
Query: 155 LDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+D +R E E+ ++ +E + L IQ+ A F R
Sbjct: 1036 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL------IQEQCKQNDINQALAFFCR 1089
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
E ++ A ++ ++KE+ +++ L+ G+ Y + ++ CKE
Sbjct: 1090 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 1149
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ ++ G +P + ++ C K E +L A++D+GL +
Sbjct: 1150 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 1209
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L YC ++ D A A+ I +E L L + T L+ L + ++ A F + E
Sbjct: 1210 LAYEYC--KRNDSANAM-ILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 1264
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
CML+ S+ GR+ EA+ + + +G+T + + + E + ++ R
Sbjct: 753 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 812
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G +P + V GK +E + L+ ++ +G + D+ C+ ++ C N +++A
Sbjct: 813 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSR 403
I K+ L ++ + L+DGL K G +++A + + M + + + ++
Sbjct: 873 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 932
Query: 404 LCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGF 439
LC KA + ++++ +KP+ TY +I G+
Sbjct: 933 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 969
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 187/427 (43%), Gaps = 22/427 (5%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ E+ R M G +P+ + +L L + A CL+ M G+ P+ FT+
Sbjct: 346 GMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTY 404
Query: 86 SLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + C++ K L L D +G+ S+ YN ++ Y KKG A +EM
Sbjct: 405 NNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPM 464
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQKLS 196
P TY +++ G Y + D L+ E K ++ +S NDY +I +
Sbjct: 465 -EGFKPNVVTYITLMRG---YIAKKDFDNAYALLDEMK---QNGVSCNDYTYNVLINGIC 517
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ + + + K E T ++ K G + A +Y + E+G+
Sbjct: 518 MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +F++ C+ + +L DV RG P + + + C +G +LL +
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDG 374
L GL ++ +SL+ Y N + K ++ + +KG + D +TY L+DG KDG
Sbjct: 638 LKDGLAPNTVVYNSLITGY-KNLNMMKEVSKFYE-SMIKGGIVADTSTYTTLIDGFSKDG 695
Query: 375 RMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+ A+ ++ + M + + + +F + LC ++ A K +EM ++ +P+ Y
Sbjct: 696 NVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYN 755
Query: 434 QVISGFM 440
+I+G++
Sbjct: 756 MLINGYL 762
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 167/423 (39%), Gaps = 81/423 (19%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + +++Y M + GF P V L+ + + A L M ++GVS N
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+T++++ +C + V G+L S G ++M YN +I+ + K G G+AF
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM--VEKKLLPKHFLSGNDYVIQK 194
+M + L P TY+S +DG Y +T SD + ++ V ++ L ++ N +I
Sbjct: 566 QM-REKGLPPNIITYTSFIDG---YCRTGCSDMALKMLNDVRRRGLQPDIVAYN-ALING 620
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
G A + + + ++ +KE + Y + + GI
Sbjct: 621 FCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVAD 680
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
S Y ++ K+ L +++ +GYIP
Sbjct: 681 TSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIP-------------------------- 714
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
D+F ++L C + ID A L ++ +L +V Y++L++G +D
Sbjct: 715 ---------DAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDC 765
Query: 375 RMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+++EA R+ HDEML MG +PD+ TY
Sbjct: 766 KLQEAFRL----------------------------------HDEMLNMGIQPDDTTYDI 791
Query: 435 VIS 437
++S
Sbjct: 792 LVS 794
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 35/249 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ A KEG ++A++++ + I Y + LCK +LR++ E G
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVG 257
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ C V G+ +E + + D G +D ++LM YC +++ A+
Sbjct: 258 FDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL 317
Query: 346 ALHIKIEK-------------LKG--------------------SLDVATYD--VLLDGL 370
L + K ++G L +T++ ++L GL
Sbjct: 318 NLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL 377
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
D R ++AV +F+ M + + ++ ++ C +LR+A+ D M K G KP
Sbjct: 378 LNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437
Query: 431 TYKQVISGF 439
TY ++ G+
Sbjct: 438 TYNSLLMGY 446
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVS 402
A+AL +++ +D +D L+ K+G E+AVR+FD M ++ + + ++
Sbjct: 176 ALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAIT 235
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
LC L + +A++ EM ++G + TY+ ++
Sbjct: 236 ALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMV 269
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 12/372 (3%)
Query: 77 GVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAA 131
+SPN +++LV + LC+ G EV G+ + + Y ++D K+ A
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L+EM +P Y+ ++DG + ++V M K P + +
Sbjct: 242 VLLLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTY--NTL 298
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I L GK A + +R K D T G ++ L K+ R + ++ + ERG
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y ++ L KE + EE L + + E+G P + S + C +GK E +E
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L+ ++ G L + + SSLM+ + ++AI + ++++ S + Y VL+DGL
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478
Query: 372 KDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML---KMGHKP 427
GR++EA+ ++ M + + + ++ ++ LC + + A+K + EML + +P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 428 DEATYKQVISGF 439
D TY ++ G
Sbjct: 539 DVVTYNILLDGL 550
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 185/427 (43%), Gaps = 16/427 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMM----RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
VL+ ++GL+ GLE Y + P + N ++ AL + + A ++ M
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGM 213
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
P+ +T+ + LC+ + + + LLD S V+YN++ID KKGD
Sbjct: 214 PEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
++ M + P TY++++ G K + + ++ MV K +P G
Sbjct: 274 SRVTKLVDNMF-LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I L + + + L ++ L KEG+ +EA+ ++ ++E
Sbjct: 333 --LINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAE 390
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y A ++ LC+E +P E +L ++ G +P S + G +E
Sbjct: 391 KGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEE 450
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ + + G + FC S L++ C ++ +A+ + K+ + D Y ++
Sbjct: 451 AIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIK 510
Query: 369 GLFKDGRMEEAVRIFDYM---KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GL G M+ A++++ M +E K ++ I++ LC K++ +A+ + ML G
Sbjct: 511 GLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRG 570
Query: 425 HKPDEAT 431
PD T
Sbjct: 571 CDPDVIT 577
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 13/382 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +LV+ G +EV+R M +P L+D L ++ I A L M
Sbjct: 189 SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDF 128
+G SP+ ++++ LC+ G V L+D+ G + + V YN +I KG
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSG 187
A L M + + + P TY ++++G + + R++ M E+ L +H S
Sbjct: 309 DKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYS- 366
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L GK A ++K+ ++ ++ L +EG+ EA +I + +
Sbjct: 367 --VLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G Y + + K EE + R++ E G S + CG G+ K
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI---EKLKGSLDVATYD 364
E + S +L G+ D+ SS+++ C +D A+ L+ ++ E+ K DV TY+
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 365 VLLDGLFKDGRMEEAVRIFDYM 386
+LLDGL + AV + + M
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCM 566
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 5/293 (1%)
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
S + I++ + E D +V + + P + LS N VI+ L +G A +F
Sbjct: 153 SVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP-NGLSFN-LVIKALCKLGFVDRAIEVF 210
Query: 209 KRACDEKIELQDDTCGC-MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
R EK L D C ++ L KE R+ EA+ + + G + Y ++ LCK
Sbjct: 211 -RGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ V L+ ++ +G P + + + C KGK + LL ++ + +
Sbjct: 270 KGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+L+ R+ L I +E+ L+ Y VL+ GLFK+G+ EEA+ ++ M
Sbjct: 330 YGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMA 389
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E + + V+ LC + +A + + M+ G P+ TY ++ GF
Sbjct: 390 EKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGF 442
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 115/257 (44%), Gaps = 8/257 (3%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISER 249
+I+ +++G + E + R E + + + + +A K ++A+ ++H ++ E
Sbjct: 83 MIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEF 142
Query: 250 GITVRDSDYYAFVNVLCKE---HQPEEVCG-LLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + +NV+ E H+ E ++ + P + + + + C G
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGF 202
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E+ + +K L D + +LM+ C +ID+A+ L +++ S Y+V
Sbjct: 203 VDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+DGL K G + ++ D M LK + ++ ++ LC +L KA+ + M+
Sbjct: 263 LIDGLCKKGDLSRVTKLVDNMF-LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 424 GHKPDEATYKQVISGFM 440
P++ TY +I+G +
Sbjct: 322 KCIPNDVTYGTLINGLV 338
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 59/308 (19%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
MDG + M G+ + L+ L+++ + A L+ M G PN +S V
Sbjct: 344 MDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAV 403
Query: 89 AQILCRSGKF----EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR GK E++ G++ SG
Sbjct: 404 IDGLCREGKPNEAKEILNGMISSGCL---------------------------------- 429
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQKLSDMGK 200
P TYSS++ G + KT +S+ + + E + + S N++ +I L +G+
Sbjct: 430 -PNVYTYSSLMKG---FFKTGLSEEAIQVWRE---MDETGCSRNEFCYSVLIDGLCGVGR 482
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH--LISERGITVRD-SD 257
A M++ + I+ M+K L G + A+++YH L E + D
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV------ASQCGKGKWKEVEE 311
Y ++ LC + LL +++RG P + + F+ + C +G+ +EE
Sbjct: 543 YNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGR-SFLEE 601
Query: 312 LLSAVLDK 319
L++ +L +
Sbjct: 602 LVARLLKR 609
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 165/388 (42%), Gaps = 39/388 (10%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI- 109
N L+ + ++ A L M G SP+ T S + Q LC +G + +
Sbjct: 109 NTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE 168
Query: 110 --YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
SV++N+++ K A + EM + R + P TY+S++DG + + E +
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEEM-SERGIVPDVVTYNSLIDGLCKSYRMEEA 227
Query: 168 DRIVGLMVEKKLLPK--------------------HFL------SGNDYVIQKLSDMGKT 201
+++ MV++K+ P H L SG + + +
Sbjct: 228 RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISG 287
Query: 202 YAAEMIFKRACDEKIELQDDTCG-------CMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ + +AC+ ++ C ++ L GR EA ++ + RGI
Sbjct: 288 FCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPD 347
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + + + C+ Q E+ + +VERG IP + + ++ E LL
Sbjct: 348 IITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLD 407
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ D G + + F +SLME C +R++D+A L + ++ +TY+VL+ GL K G
Sbjct: 408 NMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAG 467
Query: 375 RMEEAVRIFDYM--KELKVVSSSSFVIV 400
R+++A + M + ++ + SSS IV
Sbjct: 468 RVDDAKEVLVMMVSEGIQPLVSSSGTIV 495
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 45/325 (13%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ + YN +I + K GD AF L EM R +P T+SSI
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEM-KERGHSPDVVTHSSI---------------- 146
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLK 228
+Q L + G A F+ E +E D+ ++
Sbjct: 147 ---------------------VQALCNTGNLSRAMQYFR----ESVECAPDSVLFNILVH 181
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K ++ EA Q+ +SERGI Y + ++ LCK ++ EE LL +V+R P
Sbjct: 182 GLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRP 241
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C G +L+ ++ G D +SL+ +C +IDKA +
Sbjct: 242 NLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL 301
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHL 407
++K + ++ TY+VL+ GL GR EA + M ++ ++ ++ C
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361
Query: 408 KELRKAMKNHDEMLKMGHKPDEATY 432
++ +A + + M++ G PD +Y
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISY 386
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Query: 222 TCGCMLKALSKEGRVKEAIQIY--HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
TC C+L+ L K R +A QI+ L+ + T Y + CK E LL
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDT-NHITYNTLIGGFCKAGDMERAFQLLA 129
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ ERG+ P + S V + C G + ++ DS + L+ C
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKAN 187
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
Q+ +A + ++ + DV TY+ L+DGL K RMEEA ++ + M + KV + ++
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C A + + M++ G PD T+ +ISGF
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 157/355 (44%), Gaps = 8/355 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
++ M++ G + CN LL+ R +++ LA G M++ G P+ T+ + C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFC 162
Query: 94 RSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R + L + D + + V+YN +ID K A D LN M + P
Sbjct: 163 RGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EVDGIRPDA 221
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ G + + + R+V M ++++ P F + +I G+ AE ++
Sbjct: 222 VTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTF--NALIDACVKEGRISEAEELY 279
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ ++ T ++ L R+ EA Q++ + +G Y +N CK
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ E L ++ +RG + + + + C GK EE+ ++ G+ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITY 399
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ L+ C N +I+KA+ + ++K D+ TY++++ G+ K G + +A ++
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLY 454
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 160/375 (42%), Gaps = 45/375 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L ++ M G+ P V N ++D L + ++ A L M DG+ P+ T++ +
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC SG+++ +V + IY V +N +ID K+G A + EM R+L
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIR-RSL 287
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TYS ++ G Y + + ++++ G MV K P D V TY+
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP-------DVV---------TYSI 331
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ K +V+ ++++ +S+RG+ Y +
Sbjct: 332 ---------------------LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQG 370
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C+ + + + +V G P + + + C GK ++ +L+ + G+ D
Sbjct: 371 YCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDAD 430
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ ++ C ++ A L+ + LKG + D+ TY ++ GL+K G EA +F
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDLYCSL-NLKGLTPDIWTYTAMMLGLYKKGLRGEADALF 489
Query: 384 DYMKELKVVSSSSFV 398
MKE ++ + +V
Sbjct: 490 RKMKEDGILPNECYV 504
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G +L + R+ +A+ ++ + E G Y ++ LCK Q + LL +
Sbjct: 153 TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P A+ + ++ C G+W + ++S + + + D F ++L++ +I
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
+A L+ ++ + D+ TY +L+ GL R++EA ++F +M ++ I+
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C K++ MK EM + G + TY +I G+
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + SR +++ K+ V L + G+ + C+ L+ +C Q+ A++
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLC 405
K+ KL D+ T+ LL+G + R+ +A+ +FD M E+ + + ++ LC
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K++ A+ + M G +PD TY +ISG
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++++ Y G++++ M G V L+ R ++ +A ++ MV
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF 389
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGA 130
GV PN T++++ LC +GK E L +L SG+ + ++ YN++I K G+
Sbjct: 390 CGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
A+D + N + LTP TY++++ G + +D + M E +LP
Sbjct: 450 AWDLYCSL-NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
++D ++ L + + + +A + LL + K + + + +++ M+ L + + +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I+++ C +L A+ +M+K+GH+PD T+ +++GF
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGF 161
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 187/415 (45%), Gaps = 11/415 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+E+ M +G P V ++L+ L + E A L+ M R G P+ T++ +
Sbjct: 169 MELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA 228
Query: 92 LCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRN-LT 145
L ++G+ + L LLD G+ V+ YN +I + K GD A++ L+EM RN
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM--KRNGCK 286
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TYS ++ G + + + + +++ M EK+ P ++ N +I L G A
Sbjct: 287 PDVVTYSCLITGLIKASQLDEACQVLKKM-EKEGCPPDTITYN-TLINGLGKAGLLNDAG 344
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F R + T ++ AL K RV+ A ++ + GI Y + + VL
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
K Q ++ L ++ +G P + + F+ S G++KE ++ + + GLL D
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+L+ +++D A L ++ + + D +D L+ L G ++EA + +
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +SS+ ++ L + +A +++ + G KPD +Y +IS
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 178/406 (43%), Gaps = 23/406 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P V N+LL+AL + + A L+ + +P+ ++S + L R+GK+E V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 101 VLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
V + G ++ YN ++D K G F A L EM + P TY+ ++
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD-NGCVPDVRTYNCLISTLG 125
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEK 215
+ + + + M E+ +P F + +I L +G++ A E + + C
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTY--NSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T ++ L K+G +A +++ + RG + A ++ L K + ++
Sbjct: 184 VM----TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL ++ ERG P + + +A G E LL + G D S L+
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKV 391
Q+D+A + K+EK D TY+ L++GL K G + +A R+FD MK V
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
V+ S+ + + + ++ A +EM +G +PD TY +I+
Sbjct: 360 VTYSTLITALGKAARVE---SACVLFEEMESVGIQPDLFTYCSIIT 402
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 183/413 (44%), Gaps = 27/413 (6%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
GR S + ++D G D LE+ M+ G P V NAL+ + ++ A
Sbjct: 214 GRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEA 273
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDF 121
L M R+G P+ T+S + L ++ + + +L + ++ YN +I+
Sbjct: 274 YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333
Query: 122 YSKKG---DFGAAFDRL-NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
K G D G FDR+ ++ CN P TYS+++ + + E + + M
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCN-----PDVVTYSTLITALGKAARVESACVLFEEMESV 388
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+ P F + +I L G+ A+ +F + + T L +L + GR K
Sbjct: 389 GIQPDLFTYCS--IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK 446
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA +I+ + E G+ + Y A + L K + ++ CGLL++++E+G CA + +F
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG---CAFDSLKF- 502
Query: 298 ASQC-----GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+C G E ELL KGL + ++L++ ++ +A ++
Sbjct: 503 -DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLK 561
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRL 404
+ G D+ +Y L+ L + G+++ A + + M + + +S S+ +V +L
Sbjct: 562 EQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 179/419 (42%), Gaps = 21/419 (5%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++DC G F + L + MR G VP V N L+ L + + A L+ M G
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
P+ FT++ + L + G+ + + LL+ G VM Y+ +I K G+ AF
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV- 191
EM R P T+++++D + + + + ++ M E+ + P ++ N +
Sbjct: 205 KLFQEM-KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKP-GVVTYNALIA 262
Query: 192 -IQKLSDMGKTYAAEMIFKR-ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
K+ D+ + Y KR C + T C++ L K ++ EA Q+ + +
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVV----TYSCLITGLIKASQLDEACQVLKKMEKE 318
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y +N L K + L + +G P + S + + GK V
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL---GKAARV 375
Query: 310 EE---LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E L + G+ D F S++ Q+D A L ++ S DV TY+
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ L + GR +EA +IF+ MKE ++ +++ ++ L KE+ A E+++ G
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 5/263 (1%)
Query: 182 KHFLSGN----DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
K F S N + ++ L+ G+ A+++F+ K + C++ +L + G+ +
Sbjct: 2 KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
A+++ + +G Y V+ L K Q +E LL ++ + G +P + +
Sbjct: 62 AALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLI 121
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
++ G+ E L + + ++G + D+F +SL+ + KA+ L ++E+
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCP 181
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKN 416
DV TY L+ GL KDG +A ++F MK + S +F ++ L + A++
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
DEM + G KP TY +I+GF
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGF 264
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 175/438 (39%), Gaps = 25/438 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ G + LEV M+ G P + N L+D L + + A L M
Sbjct: 48 SCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD 107
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKK 125
+G P+ T++ + L ++G+ L D+ Y+S++Y L K
Sbjct: 108 NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGL-----GKV 162
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G A + L EM P TYSS++ G + +T + ++ M + P
Sbjct: 163 GRSQKAMELLEEM-ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT 221
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ L G+ A + + ++ T ++ K G + EA +
Sbjct: 222 F--TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G Y + L K Q +E C +L+ + + G P + + + G
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ L + KG D S+L+ +++ A L ++E + D+ TY
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 366 LLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
++ L K G++++A R+F M+ V++ ++F+ + R KE RK ++M
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF---EDMK 456
Query: 422 KMGHKPDEATYKQVISGF 439
+ G PD ATY ++ G
Sbjct: 457 ESGLLPDVATYDALLLGL 474
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 3/297 (1%)
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY+S+L+ + + E + + + K P + +I L GK AA
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPD--VVSYSCLINSLGRAGKWEAA 63
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + + T ++ L K G+ EA+++ + + G Y ++
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L K + E L ++ ERG +P + + G+ ++ ELL + G D
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
SSL+ + + KA L ++++ D T+ L+D L K GR+++A+ + D
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
MKE V ++ +++ + +L +A DEM + G KPD TY +I+G +
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 197/451 (43%), Gaps = 37/451 (8%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L ++ + + + LE+ MR G P SA + L L R +
Sbjct: 184 ESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWK 243
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL--------DSGIYSSVMYNLVID 120
L+G +VR G PN FT++L+ CR G + LL + +YS YN+VI+
Sbjct: 244 LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYS---YNIVIN 300
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDG---------ARRYEKTEVSDRI 170
KG A LN M NG P +T+ +I+D AR+Y E+ D
Sbjct: 301 ANCLKGQSSYALHLLNLMIENG--CKPSIATFCTIIDAFCKEGNVELARKYFD-EIED-- 355
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+GL + ++ +SG YV K D+ + A ++F+ + I T ++
Sbjct: 356 MGLS-QNTIVYNIMISG--YV--KARDISQ---ANLLFEEMRTKDIVPDGITFNTLVAGH 407
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+ G+ ++ ++ +S G+ S V LC + +E LL +++E+G P
Sbjct: 408 YRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSV 467
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA-IALHI 349
+ + +A+ G + ++ GL S CSSL+ +D+A IAL+
Sbjct: 468 VAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD 527
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
I+K ++A + VLLDG F+ G + A +++ MK V + +F ++ LC
Sbjct: 528 MIDKGFPVTNMA-FTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISG 586
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A +ML+ G P+ Y +I GF
Sbjct: 587 LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGF 617
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 190/440 (43%), Gaps = 9/440 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + +L++ + KG G + +M + P V + N +++A + +
Sbjct: 251 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSY 310
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVID 120
A L M+ +G P+ T+ + C+ G E+ D G+ ++++YN++I
Sbjct: 311 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 370
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K D A + L E +++ P T+++++ G RY K E +R++ + LL
Sbjct: 371 GYVKARDISQA-NLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLL 429
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
H S D + L G+ A + + ++ I ++ A G + A
Sbjct: 430 --HDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAF 487
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
Y ++ + G+T S + + L ++ +E L D++++G+ M + +
Sbjct: 488 YAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGY 547
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G E L + + +G+ D+ ++ + C + + A + + + +
Sbjct: 548 FRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 607
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDE 419
Y+ L+ G K G++ EA+++ M + ++ V +++ LC ++ A++ +
Sbjct: 608 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMD 667
Query: 420 MLKMGHKPDEATYKQVISGF 439
M +MG PD TY +I G+
Sbjct: 668 MCRMGLSPDIVTYNTLIDGY 687
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 9/344 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G P+V A N+++ A A YG MV+ G++P+ T S + L R G +
Sbjct: 462 GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEA 521
Query: 100 --VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ ++D G +++ + +++D Y + G A NEM GR + P +++ ++
Sbjct: 522 WIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM-KGRGVFPDAVAFAAFIN 580
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + M+ K +P +F+ + +I +GK A + + +
Sbjct: 581 GLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS--LIGGFCKVGKLNEALKLVREMNKRGL 638
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K+GR+K AI+ + + G++ Y ++ CK
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADD 698
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L+ + + G+ P + + C K +L ++ G++ ++ ++++ C
Sbjct: 699 LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC 758
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
N +D A+ L K+ K+ + T +VLL K G E+A+
Sbjct: 759 -NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 801
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 6 EGRDSQSDALSLV--LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+GR DA++ ++ GL D +V+ M GFVP N+L+ + ++
Sbjct: 564 KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKL 623
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLV 118
A L M + G+ P+ FT +++ LC+ G+ E + + G+ V YN +
Sbjct: 624 NEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 683
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID Y K D G A D + +M + P +TY+ + G K + I+ ++
Sbjct: 684 IDGYCKAFDVGGADDLMMKMSDS-GWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG 742
Query: 179 LLPK 182
++P
Sbjct: 743 IVPN 746
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 5/198 (2%)
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
H + E +V D+ AFV K E +L + E G P +S
Sbjct: 180 HRVYESDFSVLDTLMQAFV----KSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRA 235
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G V +L V+ KG ++F + L+ +C AL + K + DV +Y
Sbjct: 236 GDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSY 295
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+++++ G+ A+ + + M E S ++F ++ C + A K DE+
Sbjct: 296 NIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIED 355
Query: 423 MGHKPDEATYKQVISGFM 440
MG + Y +ISG++
Sbjct: 356 MGLSQNTIVYNIMISGYV 373
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 201/454 (44%), Gaps = 36/454 (7%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S+A S++++ YS G+ +E + +MR + P + A N +L L R+ LA +Y
Sbjct: 128 SEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYN 187
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID-FYSKK 125
M++ ++P+ T+ ++ LC++ K + L L D GI + ++Y++V+ K
Sbjct: 188 QMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAK 247
Query: 126 GDFGAA--FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK- 182
F A F ++ R+L TY+ +L+G + K+ D L+ +LL K
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLI----TYNVLLNG---FCKSGYLDDAFTLL---QLLTKD 297
Query: 183 -HFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
H L Y +I L + A M +++ E I+ M++ LS+EGRV EA
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + ++ERG+ Y A + C +E L ++ + P S +
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS-- 357
C G + + + + G L +SL+ C ++++A L ++E ++
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 358 -----------LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
D+A+ V+++ L + G + +A ++ + + V+ ++ I+++ C
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A K EM GH PD TY +I G
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/454 (18%), Positives = 187/454 (41%), Gaps = 60/454 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L+ + G D + +++ G + V L++ L+R A Y M+R
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGA 130
+ + P+ ++++ + L + G+ L LL + G+ ++ YN +I + G
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L + + P TYS ++ G + + I M + LP + +
Sbjct: 392 A-ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPS--VVTFNS 448
Query: 191 VIQKLSDMGKTYAAEMIF---------------KRACDEKIELQDDTCGCMLKALSKEGR 235
+I L + A ++F + D+ ++ + M++ L + G
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA--SLQVMMERLCESGM 506
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ +A ++ + + G+ Y +N CK L +++ +G++P ++
Sbjct: 507 ILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGT 566
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI---- 351
+ G+ ++ E+ ++ KG + +S ++M + C I A+++ +K
Sbjct: 567 LIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDF 626
Query: 352 -----------------EKLKGSL-------------DVATYDVLLDGLFKDGRMEEAVR 381
E+L+ ++ D+A Y + L GL + R EA
Sbjct: 627 RGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFA 686
Query: 382 IFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
IF +K+ K+ +SS+S V+++ RLC ++ L AM
Sbjct: 687 IFSVLKDFKMNISSASCVMLIGRLCMVENLDMAM 720
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 191/445 (42%), Gaps = 33/445 (7%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ Y KG + + +M+ G P N L+ + ++ AS + MV G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAF 132
++PN +++ + + GK ++ L LL+ G +V YN VI+ SK+ F A
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
++M + L P TY++++DG R +T+ + +I M ++K LP + + +I
Sbjct: 611 KICDKMAE-QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS--LI 667
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L GK AE++ K + + + T ++ GR+ A + + + G
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727
Query: 253 VRDSDYYAFVNVLCKE-----------HQ------PEE-------VCGLLRDVVERGYIP 288
Y + L KE H+ P E V LL + E G P
Sbjct: 728 PNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEP 787
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
S V+ C KG++ E E+L+ + ++G D SL+ +C N ++D A+ +
Sbjct: 788 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 847
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL 407
IE L ++ Y L+ L K G++EEA +FD M E + + + ++V L
Sbjct: 848 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 907
Query: 408 KELRKAMKNHDEMLKMGHKPDEATY 432
EL MK M P+ TY
Sbjct: 908 GELDLCMKLLHIMESKNFTPNIQTY 932
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 179/412 (43%), Gaps = 9/412 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M G P++ N L++ L ++ ++R A + + + +SP+ FT++ + C
Sbjct: 227 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 286
Query: 94 RSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R+ ++ G+ D + +SV Y+ +I+ +G A D L EM + + P
Sbjct: 287 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE-KGIEPTV 345
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+ + E E + +V M ++ P + +I LS +GK A ++
Sbjct: 346 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPN--VQTYTALISGLSRLGKLEVAIGLY 403
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ E + T ++ L GR A++I+H + G Y + LC
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 463
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
E+ L +++ G +P + + + KG LL + + G D +
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 523
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ + +++ A ++ + + + +Y L+DG KDG+++ A+ + + M+E
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583
Query: 389 LKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + S+ V++ L +A K D+M + G P+ TY +I G
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 153/354 (43%), Gaps = 8/354 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G P V AL+ L R ++ +A LY M+++G+ PN T++ + LC G+
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 98 FEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
F L + + ++ YN +I GD A +M L P TY+
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYN 489
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + R++ LM E P + + ++ S GK +A F+
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY--NELVSGFSKWGKLESASFYFQEMV 547
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + + ++ SK+G+V A+ + + E G Y A +N L KE++
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + + E+G +P + + + C G+ + ++ + + L + + SSL+
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
C + D+A L ++E+ + D T+ L+DG GR++ A + M
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 185/432 (42%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +++ S KG + + + Y P V +L+ R + LA ++ M
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDF 128
V++G PN T+S + LC G+ + L +L+ GI +V Y L I
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + M R P TY++++ G R K EV+ + M+++ L+P
Sbjct: 362 EEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY-- 418
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I +L G+ A IF T ++K L G +++A+ ++ + +
Sbjct: 419 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 478
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y +N + LL + E G P + V+ GK +
Sbjct: 479 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 538
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ GL + ++L++ + + ++D A++L ++E++ + +V +Y+ +++
Sbjct: 539 ASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVIN 598
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K+ R EA +I D M E ++ + ++ ++ LC + A K +M K P
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 658
Query: 428 DEATYKQVISGF 439
+ TY +I G
Sbjct: 659 NLYTYSSLIYGL 670
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 185/414 (44%), Gaps = 19/414 (4%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA--QILC 93
R++R F PA ++ A + EIR A + +S F +SL + +L
Sbjct: 159 RLVRDRVFAPADHIRILMIKACRNEEEIRRV-----ADFLNEISGMGFGFSLYSCNTLLI 213
Query: 94 RSGKFEVVLG-------LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ KFE+V G +L+SGI S++ +N +I+ SKKG A L+++ +L+
Sbjct: 214 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-YDLS 272
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+S++ G R +++ + MV++ P +I L + G+ A
Sbjct: 273 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST--LINGLCNEGRVDEAL 330
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + ++ IE T + AL +EAI++ + +RG Y A ++ L
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + E GL +++ G +P + + + C G++ ++ + G L ++
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ +++ C I+KA+ L K+ K+ V TY+ L++G G + A R+ D
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
MKE ++ +VS +L A EM++ G P+ +Y +I G
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDG 564
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 138/297 (46%), Gaps = 5/297 (1%)
Query: 147 GFSTYS--SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
GFS YS ++L ++E E + + M+ + P L+ N +I LS GK A
Sbjct: 202 GFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS-LLTFNT-LINILSKKGKVREA 259
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E+I + + T ++ + + A ++ + + G Y +N
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 319
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC E + +E +L +++E+G P + + + C +E EL++ + +G +
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L+ +++ AI L+ K+ K + TY+ L++ L GR A++IF
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439
Query: 385 YMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+M+ + ++ ++ ++ LC ++ KAM ++MLKMG P TY +I+G++
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 496
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 167/377 (44%), Gaps = 13/377 (3%)
Query: 74 VRDGVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGD 127
+R+ V+PN+ T+++V LC+ S +EV+ + D + V Y+ VI+ + K+G+
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + L EM + P TY+S++DG R K + + +V M K + P F
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF- 119
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I + K A ++K L + ++ L +E R+ EA +++ +
Sbjct: 120 -SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178
Query: 248 ERGITVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
R D Y A ++ CK E+ +L + R +P + S + C G
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +L + KG + + ++L+ C+ ++D A L ++ D +Y+
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM-LK 422
LLDG + GR+EEA ++F M + ++ +V C+ L +A + M
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY V++G+
Sbjct: 359 AGIDPDVVTYSIVVAGY 375
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 191/485 (39%), Gaps = 58/485 (11%)
Query: 6 EGRDSQSDA-----LSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYR 59
E RD +S A S V++ + +G E+ R M+ G P V +++D L R
Sbjct: 34 EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCR 93
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------- 112
++ A + M GV P+KFT+S + C + K + L L + SS
Sbjct: 94 DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVS 153
Query: 113 ------------------------------------VMYNLVIDFYSKKGDFGAAFDRLN 136
V Y +ID + K G+ A L
Sbjct: 154 SSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLG 213
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
M GR P TYSS+L G + + + + M K +P + +I L
Sbjct: 214 VM-EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN--VVTYTTLIHGLC 270
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
K AA ++ + +L + GR++EA Q++ ++ +
Sbjct: 271 AAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRI 330
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDV-VERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y V C + EE LL ++ G P + S VA ++ E E +
Sbjct: 331 TYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 390
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ + + ++ SSL++ C +++ A+ + ++K DV TY ++++GL R
Sbjct: 391 MIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDR 446
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
EEA+ + + M +V S +F V+ LC L ++ +A K M G +P TY
Sbjct: 447 TEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 506
Query: 435 VISGF 439
++ GF
Sbjct: 507 LLEGF 511
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 170/443 (38%), Gaps = 64/443 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D + G +++ +M VP V ++LL L + ++ A L+ M
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGA 130
G PN T++ + LC + K + L+D + +V YN ++D Y + G
Sbjct: 253 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEE 312
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTE--VSDRIVGLMVEKKLLPKHFL 185
A EM ++ P TY+ ++ G A R E+ + + ++ ++ +
Sbjct: 313 AKQLFKEMA-AKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 371
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ + + + EMI + + T ++ L K GRV A+++
Sbjct: 372 VAGYSRAKRFVEAAE-FIQEMIARNVAPNAV-----TYSSLIDGLCKAGRVNHAMEVLKN 425
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + + Y + LC + EE LL ++V + P + + + C G
Sbjct: 426 VDKPDVVT----YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGD 481
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E +LL A+ GL + TY
Sbjct: 482 MDEAWKLLVAMAAHGL-----------------------------------EPGMVTYTT 506
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS--------SFVIVVSRLCHLKELRKAMKNH 417
LL+G + GRME A +F+ M+ SSS +F ++ LC +E+ KAM
Sbjct: 507 LLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 566
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
+E+ +P E ++ G +
Sbjct: 567 EELRSRECEPAEEDCLAIVDGLL 589
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 47/348 (13%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---- 106
NALLD R I A L+ M P++ T++ + + C + + E LL+
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357
Query: 107 -SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+GI V+ Y++V+ YS+ F A + + EM RN+ P TYSS++DG +
Sbjct: 358 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI-ARNVAPNAVTYSSLIDGLCK---- 412
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ R+ M K + K + VI+ L +T A + + ++++E T
Sbjct: 413 --AGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ AL + G + EA ++ ++ G+ Y LL
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT----------------LLEGFSRT 514
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G + A EL + + K K+ + V ++ S+L+ C R+IDKA
Sbjct: 515 GRMEIAYELFEVM-----RRKAKKSSSAANLVPEQAF-------SALIRGLCKAREIDKA 562
Query: 345 IALHIKIEKLKG-SLDVATYDVL--LDGLFKDGRMEEAVRIFDYMKEL 389
+A+ +E+L+ + A D L +DGL + GR EEA ++ + + ++
Sbjct: 563 MAV---VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 23/264 (8%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+++ G D S+V+ YS F++ E + M P ++L+D L +
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYN 116
+ A ++++ P+ T+++V + LC + + E L LL+ + V +N
Sbjct: 415 RVNHAM----EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
VI + GD A+ L M L PG TY+++L+G R + E++ + +M
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMA-AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRR 529
Query: 177 K--------KLLPKHFLSGNDYVIQKLSDMGKTYA-AEMIFKRACDEKIELQDDTCGCML 227
K L+P+ S + K ++ K A E + R C E ++ C ++
Sbjct: 530 KAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSREC----EPAEEDCLAIV 585
Query: 228 KALSKEGRVKEAIQIYHLISERGI 251
L + GR +EA ++ + IS+ G+
Sbjct: 586 DGLLRAGRTEEAGKLINSISKVGL 609
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 194/447 (43%), Gaps = 52/447 (11%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ + P + N +LD L ++ ++ A L M +G+ PN+ T++++ C+ G
Sbjct: 238 MKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGW 297
Query: 98 FEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ ++D ++V+ YN++I K G AF +EM N + L P TY+
Sbjct: 298 LKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLK-LLPDVVTYN 356
Query: 153 SILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
++++G + + E+ D++ G V+ + + V++ GK A
Sbjct: 357 TLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV------VVKWYVKEGKMDNAGNEL 410
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
++ + T ++ K GR+ EA ++ +S +G+ + ++ LC E
Sbjct: 411 RKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 470
Query: 269 HQPEEVCGLLRDVVERGY-----------------------------------IPCAMEL 293
+ ++ LL +RGY IP +
Sbjct: 471 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITY 530
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C GK + + L+ +L+ GL+ D ++++ YC Q++KA H K+ K
Sbjct: 531 NTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVK 590
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRK 412
D+ T ++LL GL +G +++A+++F+ ++ + K + + ++ ++S LC +
Sbjct: 591 KSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEE 650
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A EM + PD TY ++S
Sbjct: 651 AFDLLAEMEEKKLGPDCYTYNAILSAL 677
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 189/451 (41%), Gaps = 82/451 (18%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYGAMVRDGVS---------- 79
+++ M+ P + CN L++AL R + + L+ ++ +++ GV
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILI 219
Query: 80 -------------------------PNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY 110
P+ +++ + +LC+ GK +++L + ++G+
Sbjct: 220 YGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLL 279
Query: 111 SS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
+ +N+++ Y K G A ++ M N+ P TY+ ++ G + K + + R
Sbjct: 280 PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQN-NVLPDVWTYNMLIGGLCKDGKIDEAFR 338
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+ M KLLP D V TY + C + C LK
Sbjct: 339 LKDEMENLKLLP-------DVV---------TYNTLI---NGCFD--------CSSSLKG 371
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
++ + +G+ Y V KE + + LR + E G+ P
Sbjct: 372 F----------ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPD 421
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + C G+ E ++ + KGL ++S ++++ C R++D A L
Sbjct: 422 CVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLS 481
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
K +D +Y L+ G FKDG+ EA++++D MKE +++ S ++ ++ LCH
Sbjct: 482 SASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSG 541
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +++ +E+L+ G PDE TY +I G+
Sbjct: 542 KTDQSIDKLNELLESGLVPDETTYNTIILGY 572
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 158/370 (42%), Gaps = 25/370 (6%)
Query: 26 GLFMDGL--EVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
GL DG E +R+ M +P V N L++ + + L M GV P
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRL 135
N T+++V + + GK + L +SG V +N +I+ Y K G AF +
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445
Query: 136 NEMCNGRNLTPGFSTYSSILD---GARRYE---KTEVSDRIVGLMVEKKLLPKHFLSGND 189
+EM + L T ++IL G R+ + K S G V++ +S
Sbjct: 446 DEMSR-KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE-------VSYGT 497
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ D GK+ A ++ +++I T M+ L G+ ++I + + E
Sbjct: 498 LIMGYFKD-GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES 556
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ ++ Y + C+E Q E+ +V++ + P + + C +G +
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L + + KG +D+ ++++ C + ++A L ++E+ K D TY+ +L
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676
Query: 370 LFKDGRMEEA 379
L GRM+EA
Sbjct: 677 LADAGRMKEA 686
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 149/405 (36%), Gaps = 68/405 (16%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+I EG+ + +A++ +V+ Y +G + R M GF P N L++
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSV 113
+ + A + M R G+ N T + + LC K + LL S V
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 493
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y +I Y K G A +EM + + P TY++++ G KT+ S +
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEM-KEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
++E L+P + + +I G+ A + + + TC +L+ L E
Sbjct: 553 LLESGLVPDE--TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD------------- 280
G + +A+++++ +G + Y ++ LCKE + EE LL +
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670
Query: 281 ----------------------VVERGYI-----------------------PCAMELSR 295
+VE+G + P ++ S
Sbjct: 671 NAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSE 730
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ C +GK+K+ ++ KG+ L SLME R+
Sbjct: 731 QINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 201/463 (43%), Gaps = 44/463 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V Y+H G D ++ M P V+ N +L AL ++ +I + L +++
Sbjct: 85 TVVRGLYAH-GHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLK 143
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGL---LDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
G+S NKFT ++ + LC G+ E + L +D+ I V+ YN ++ K A
Sbjct: 144 RGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEA 203
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L M N + P TY++I+DG + + + + ++ + K +P + +
Sbjct: 204 AQYLRRMMN-QGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCS--L 260
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I L G A +F A + ++ ++K L ++G + A+Q+ + + E G
Sbjct: 261 INGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGC 320
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP------------C---------- 289
Y +N LCK + ++ D + +GY+P C
Sbjct: 321 HPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQ 380
Query: 290 -------------AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
A+ + + C GK KEV E ++ KG ++ + L+E +C
Sbjct: 381 LVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 440
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
Q+++A + +++ + D +++ L+ G ++G ++ A +F + E +++
Sbjct: 441 KINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATAD 500
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+F I++ ++ A K EM+ G+KPD TY+ ++ G
Sbjct: 501 TFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG 543
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 185/412 (44%), Gaps = 18/412 (4%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M ++G PA A NA++DAL A +Y M+ GV+P+ T ++ + C +G+
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
V L LL S + Y V+ G A +EM R++ P +T++
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLR-RDVFPDVATFN 119
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV----IQKLSDMGKTYAAEMIF 208
++L +K ++ + G ++ K L K +S N + I+ L + G+ A +
Sbjct: 120 NVLHAL--CQKGDIMES--GALLAKVL--KRGMSVNKFTCNIWIRGLCEGGRLEEAVALV 173
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ + D I T +++ L K+ +V+EA Q + +G D Y ++ CK
Sbjct: 174 E-SMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+E LL+D + +G++P + + C +G + EL + K L D
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMK 387
+SL++ C I A+ + ++ + D+ TY+++++GL K G + +A + D +
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + +F ++ C +L A++ + M G PD TY V++G
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 173/404 (42%), Gaps = 11/404 (2%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P V N L+ L + ++++ A+ M+ G P+ FT++ + C+ +
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 103 GLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
LL I+ V Y +I+ +GD A + NE ++L P Y+S++ G
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE-AQAKDLKPDLVVYNSLVKG 298
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
R + +++ MVE P + + VI L MG A ++ A +
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPD--IWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T M+ K ++ A+Q+ + GI Y + +N LCK + +EV
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+++ +G P A+ + + + C + +E ++ + GL+ D+ ++L+ +C
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCR 476
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSS 395
N +D A L K+++ S T+++L+ M+ A +IF M K K
Sbjct: 477 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK-PDLY 535
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++V C + +A + EM+ G P AT+ +V++
Sbjct: 536 TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSL 579
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 177/414 (42%), Gaps = 13/414 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y + + + E+ + GFVP +L++ L + ++ A L+
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 78 VSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ P+ ++ + + LCR G +V+ +++ G + + YN+VI+ K G+ A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+N+ + P T+++++DG + K + + ++V M + P + V+
Sbjct: 345 VVMNDAIV-KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS--VL 401
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L GK F+ + T +++ K +++EA + +S+ G+
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ ++ C+ + L + + E+GY A + + + K + E++
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLF 371
++ KG D + L++ C +D+A +H+ KG + +AT+ +L+ L
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY-VHLAEMVSKGFVPSMATFGRVLNSLA 580
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ R+ EAV I M + VV I+ + KE+ +E++K GH
Sbjct: 581 MNHRVSEAVAIIHIMVRMGVVPEVVDTILST---DKKEIAAPKILVEELMKKGH 631
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 157/364 (43%), Gaps = 18/364 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+GL + L+V M G P + N +++ L + I A+ + + G P+ FT
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361
Query: 85 WSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + C+ K + L L++ GI ++ YN V++ K G + EM
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P TY+ +++ + + E + ++ M + L+P +S N +I G
Sbjct: 422 L-KGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDT-ISFNT-LIHGFCRNG 478
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A ++F++ ++ DT ++ A S + ++ A +I+ + +G Y
Sbjct: 479 DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYR 538
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
V+ CK + L ++V +G++P R + S + E ++ ++
Sbjct: 539 VLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRM 598
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KGSLDVATYDVLLDGLFKDGRME 377
G++ +++ S + + A A I +E+L KG + TY+VL +G+ +D ++
Sbjct: 599 GVV------PEVVDTILSTDKKEIA-APKILVEELMKKGHISYPTYEVLHEGV-RDNKLT 650
Query: 378 EAVR 381
R
Sbjct: 651 RKAR 654
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 181/406 (44%), Gaps = 12/406 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P V N L+ L + A + G M+++G P+K ++ V LC+ +
Sbjct: 222 MRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKR 281
Query: 98 FEVVLGLL-----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
V LL D+G+ + V YN++I +K G A + L E G+ Y
Sbjct: 282 VSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRE-SEGKRFRVDEVGY 340
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
S+++ + + IVG M+ K+ P + V+ +G+ A + K
Sbjct: 341 SAVVHSFCLNGRMAEAKEIVGEMISKECHPD--VVTYSAVVDGFCRIGEIDQARKMMKHM 398
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ T +L L K G+ EA ++ + E T D Y ++ +E +
Sbjct: 399 YKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKL 458
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+E C ++ ++++G+ P +E++ + + C +GK E +E + KG ++ +++
Sbjct: 459 KESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTV 518
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ + ++ A++L + DV TY V+++ L + GR++EA + + M +
Sbjct: 519 IHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGL 578
Query: 392 VSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
V + ++ V+ R C + + + D+ML + ++ Y QVI
Sbjct: 579 VPTLVTYRTVIHRYCEKGTVEELVDLLDKML--ARQELKSVYNQVI 622
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 119/309 (38%), Gaps = 49/309 (15%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYS 123
+ G M+ P+ T+S V CR G+ + ++ + N+V ++
Sbjct: 359 IVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLC 418
Query: 124 KKGDFGAAFDRLNEMCNGRNL-TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G A++ LN+ +G + TP TYS ++ G RR K + S +V M++K P
Sbjct: 419 KVGKSSEAWELLNK--SGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPT 476
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK---------------IELQDD------ 221
+ +I L GK A+ F C K Q D
Sbjct: 477 TV--EINLLIHALCKEGKPAEAKE-FMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALS 533
Query: 222 ---------------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
T ++ AL ++GR+KEA + + RG+ Y ++ C
Sbjct: 534 LLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYC 593
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
++ EE+ LL ++ R + ++ + C GK E LLS VL D+
Sbjct: 594 EKGTVEELVDLLDKMLARQELKSVY--NQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQ 651
Query: 327 CCSSLMEYY 335
C LME +
Sbjct: 652 TCHILMESF 660
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 129/322 (40%), Gaps = 14/322 (4%)
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL--PK 182
+GD AAF+ + +L R + + R+V LM+ + + P+
Sbjct: 103 QGDARAAFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPR 162
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
F +++ S GK +A + + + C + L GRV +A+
Sbjct: 163 QFA----HLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGF 218
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ G+ Y + LC + E ++ +++ G P + ++ C
Sbjct: 219 ADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCK 278
Query: 303 KGKWKEVEELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ + EV LL+ + D GLL D + L+ + D+A+ + E + +D
Sbjct: 279 EKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEV 338
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYM--KELK--VVSSSSFVIVVSRLCHLKELRKAMKNH 417
Y ++ +GRM EA I M KE VV+ S+ VV C + E+ +A K
Sbjct: 339 GYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSA---VVDGFCRIGEIDQARKMM 395
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
M K G KP+ T+ +++G
Sbjct: 396 KHMYKNGCKPNIVTHTALLNGL 417
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 177/414 (42%), Gaps = 44/414 (10%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ ++R + + G + + + L+D R + + LA G M++ G P+ T+ +
Sbjct: 93 ISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNG 152
Query: 92 LCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + + + L+D + + V+YN +ID + A D LN M + P
Sbjct: 153 FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM-EKMGIRP 211
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+S++ K VS RI+ M+ + P D + T++A
Sbjct: 212 DVITYNSLITRLFHSGKWGVSARILSDMMRMGIHP-------DVI---------TFSA-- 253
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
M+ KEG++ EA + Y + +R + Y + +N LC
Sbjct: 254 -------------------MIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E +L +V +G+ P A+ + V C + + ++L + G+ D+F
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-VRIFDY 385
++L + YC Q + A + ++ D+ T+++LLDGL + G++E+A V++ D
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K VV ++ I++ +C ++ A + G PD TY ++ G
Sbjct: 415 QKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 169/420 (40%), Gaps = 55/420 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ S ++DC+ L M GF P++ +L++ N I+ A L +
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V G PN V+YN +ID + A D
Sbjct: 170 VGLGYEPN------------------------------VVIYNTIIDSLCENRQVDTALD 199
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
LN M + P TY+S++ K VS RI+ M+ + P +
Sbjct: 200 VLNHM-EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPD---------VI 249
Query: 194 KLSDMGKTYAAE---MIFKRACDEKIELQDD----TCGCMLKALSKEGRVKEAIQIYHLI 246
S M + E + K+ DE I+ D T ++ L G + EA ++ + +
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+G Y VN CK + ++ +L + G + C G++
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVATY 363
E++L+ ++ G+L D + + L++ C + +I+KA+ +K+E L+ S + + TY
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL---VKLEDLQKSETVVGIITY 426
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
++++ G+ K ++E+A +F + LK V S + + + L+ R ++ H+ KM
Sbjct: 427 NIIIKGMCKANKVEDAWYLFCSL-ALKGV-SPDVITYTTMMIGLRRKRLWLEAHELYRKM 484
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L A++K + + I ++ I GI+ + ++ C+ + L +++ G
Sbjct: 79 LLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLG 138
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + V C + +E L+ ++ G + +++++ C NRQ+D A+
Sbjct: 139 FEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTAL 198
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL----KVVSSSSFVIVV 401
+ +EK+ DV TY+ L+ LF G+ + RI M + V++ S+ + V
Sbjct: 199 DVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVF 258
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L E A K +DEM++ P+ TY +I+G
Sbjct: 259 GKEGQLLE---AKKQYDEMIQRSVDPNIVTYNSLINGL 293
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 208/478 (43%), Gaps = 53/478 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D V+ Y GL +E++ ++ +G P+V N +LD L +N I++
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM- 114
+Y M RDG PN FT++++ + LC++ K + LL D+ Y++V+
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 115 ------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
YN +I+ K+ D+ AF+ + EM + ++P +
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVE-KGISPNVIS 283
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEM 206
YS++++ + E++ + M+++ P N Y + L G T+ A
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHP------NIYTLSSLVKGCFLRGTTFDALD 337
Query: 207 IFKRACDEKIELQDDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ + LQ + +++ G + +A+ ++ + E G + Y + +N
Sbjct: 338 LWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
K + + ++ G P + + V + C K+KE E L+ + +
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKL-KGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++ ++ C ++D A + ++E+ + ++ TY+ LLDGL K R+EEA +
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 384 D--YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+M+ ++ SSS++ ++ C+ A++ +M+ G PDE T +I +
Sbjct: 517 REIFMRGVE-WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
KH + +I+KL+ G+ + + + ++ + +D ++ + G + A++
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 132
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+++ I E G Y ++ L E++ + + + RD+ G+ P + + + C
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K ++LL + +KG D+ ++++ C + + L + E + V+
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-----VS 247
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKEL--KVVSSS--SFVIVVSRLCHLKELRKAMKNH 417
Y+ L++GL K+ + A F+ M+E+ K +S + S+ +++ LC+ ++ A
Sbjct: 248 VYNALINGLCKEHDYKGA---FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 418 DEMLKMGHKPDEATYKQVISG 438
+MLK G P+ T ++ G
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKG 325
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 190/431 (44%), Gaps = 18/431 (4%)
Query: 19 LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
+ Y+ G ++ + M ++ PA A NA++DAL A +Y M+ GV
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFD 133
+P+ T ++ + C +G+ V L LL S Y V+ G A
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV-- 191
+EM GR++ P +T++++L +K +V + G ++ K L K +S N +
Sbjct: 198 LFDEML-GRDVFPDVATFNNVLHAL--CQKGDVMES--GALLAKVL--KRGMSANKFTCN 250
Query: 192 --IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
I+ L + G+ A + +R + T +++ L K+ +V+EA Q + +
Sbjct: 251 IWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G D Y ++ CK +E LL+D V +G++P + + C +G +
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL + K L D +SL++ C I A+ + ++ + D+ TY+++++G
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING 429
Query: 370 LFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K G + +A + D + + + +F ++ C +L A++ + M G PD
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489
Query: 429 EATYKQVISGF 439
TY V++G
Sbjct: 490 VITYNSVLNGL 500
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 189/423 (44%), Gaps = 13/423 (3%)
Query: 25 KGLFMDG-LE--VYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
+GL DG LE V + R+ +V P V N L+ L + ++++ A+ G M+ G P
Sbjct: 254 RGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRL 135
+ FT++ + C+SG + LL ++ V Y +I+ +GD A +
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
NE ++L P Y+S++ G R + +++ MVE+ P + + +I L
Sbjct: 374 NE-AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPD--IWTYNIIINGL 430
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
MG A ++ A + T ++ K ++ A+Q+ + GI
Sbjct: 431 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDV 490
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + +N LCK + +EV +++ +G P A+ + + + C + +E ++
Sbjct: 491 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ GL+ D+ ++L+ +C N +D A L K+++ S T+++L+
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610
Query: 376 MEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
M+ A +IF M ++ I+V LC + +A + EM+ G P AT+ +
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGR 670
Query: 435 VIS 437
+++
Sbjct: 671 MLN 673
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 187/435 (42%), Gaps = 43/435 (9%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V+ N +L AL ++ ++ + L +++ G+S NKFT ++ + LC G+ E + L
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268
Query: 105 LDS-GIYSS---VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
++ G Y + V YN ++ K A L M N + P TY++I+DG +
Sbjct: 269 VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN-QGCIPDDFTYNTIIDGYCK 327
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ + ++ V K +P + +I L G A +F A + ++
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCS--LINGLCAEGDIERALELFNEAQAKDLKPDL 385
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++K L ++G + A+Q+ + + E G Y +N LCK + ++ D
Sbjct: 386 VVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND 445
Query: 281 VVERGYIPCAMELSRFVASQCGK-----------------------------------GK 305
+ +GY+P + + C + GK
Sbjct: 446 AIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGK 505
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
KEV E ++ KG ++ + L+E +C Q+++A + +++ + D +++
Sbjct: 506 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNT 565
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ G ++G ++ A +F + E +++ +F I++ ++ A K EM+ G
Sbjct: 566 LIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 625
Query: 425 HKPDEATYKQVISGF 439
+KPD TY+ ++ G
Sbjct: 626 YKPDLYTYRILVDGL 640
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 179/416 (43%), Gaps = 13/416 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y G+ + E+ + GFVP +L++ L + +I A L+
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
+ P+ ++ + + LCR G +V+ +++ G + + YN++I+ K G+
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +N+ + P T+++++DG + K + + ++V M + P ++ N
Sbjct: 439 AAVVMNDAIV-KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD-VITYNS- 495
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ L GK F+ + T +++ K +++EA + + + G
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + ++ C+ + L + + E+GY A + + + K + E
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 615
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDG 369
++ ++ KG D + L++ C +D+A A H+ KG + +AT+ +L+
Sbjct: 616 KIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYA-HLAEMISKGFVPSMATFGRMLNL 674
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L + R+ EAV I M + VV I+ + KE+ +E++K GH
Sbjct: 675 LAMNHRVSEAVAIIHIMVRMGVVPEVVDTILST---DKKEIAAPKILVEELMKKGH 727
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 143/352 (40%), Gaps = 53/352 (15%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
V G++P V N L+D ++ ++ A L M G++P+ T++ V LC++GK +
Sbjct: 448 VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAK 507
Query: 100 VVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
V + I +++ YN++I+ + K A + MC L P +++++
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQD-GLVPDAVSFNTL 566
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ G R L G + QKL + G + A
Sbjct: 567 IHGFCRNGD---------------------LDGAYLLFQKLDEKGYSATA---------- 595
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
DT ++ A S + ++ A +I+ + +G Y V+ LCK +
Sbjct: 596 ------DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA 649
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L +++ +G++P R + + E ++ ++ G++ +++
Sbjct: 650 YAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVV------PEVVDT 703
Query: 335 YCSNRQIDKAIALHIKIEKL--KGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
S + + A A I +E+L KG + Y+VL +G+ +D ++ R D
Sbjct: 704 ILSTDKKEIA-APKILVEELMKKGHISYRAYEVLHEGV-RDNKLTRKARKAD 753
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 168/396 (42%), Gaps = 45/396 (11%)
Query: 35 YRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
YR M+ + P+V L+DAL + I AS + M+ G +PN T++ + C+
Sbjct: 91 YRDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 95 SGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G + + L + + +S YN++ID Y K+ L EM P F
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK-YGCEPNFI 208
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY++++D + K + + +M+ + P HF
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF------------------------- 243
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
T M+ K G++ A +++ L+++RG Y ++ C+ +
Sbjct: 244 ------------TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ ++ LL + E G P + + V+ C + E E+ + + G LD CS
Sbjct: 292 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 351
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L++ C +R++D A L ++E+ + DV Y +L+ G K ++++++ F M +
Sbjct: 352 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
V + ++ IV+ +LC +R ML+ G
Sbjct: 412 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 168/399 (42%), Gaps = 16/399 (4%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-- 107
CN LL A R+ + + A L+ + SP+ T+S + C++ F+ LLD
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 108 --GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
GI + +YN +I G +A +M R+ P TY+ ++D + +
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM--QRHCAPSVITYTILVDALCKSARI 118
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ I+ M+E P + + +I +G A ++F + + T
Sbjct: 119 SDASLILEDMIEAGCAPN--VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ K+ R ++ ++ + + G Y ++ L K + + L + ++ R
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
P + + C G+ EL + D+G L D + + ++ C +ID A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIV 400
L ++ + DV TY+ ++ GL K +++EA +++ ++ L VV+ S+ +
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST---L 353
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC + L A K EM + G PD Y +I GF
Sbjct: 354 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 180/419 (42%), Gaps = 54/419 (12%)
Query: 30 DGLEVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
D + YR+ M G VP + N ++ L + A Y M R +P+ T++
Sbjct: 48 DFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYT 106
Query: 87 LVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNG 141
++ LC+S + ++ ++++G +V+ YN +I+ + K G+ A N+M
Sbjct: 107 ILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN 166
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ +P TY+ ++DG + E+ + +++ MV+ P +F++ N
Sbjct: 167 -SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP-NFITYNT------------ 212
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
++ +L K G+ +A + ++ R +
Sbjct: 213 ------------------------LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM 248
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+++ CK Q + L + + +RG +P + ++ C + + +LL + + G
Sbjct: 249 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC 308
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
D +S++ C Q+D+A ++ + LDV T L+DGL K R+++A +
Sbjct: 309 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 368
Query: 382 IFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++E++ S+ ++ I++ C +L K++ EML G P TY VI
Sbjct: 369 L---LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 424
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 223 CGCMLKALSKEGRVKEAIQIY--HLISERGITVRDS-DYYAFVNVLCKEHQPEEVCGLLR 279
C C+L A ++ + +EA ++ HL G+ DS Y +N CK ++ LL
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLC---GLCSPDSITYSTLINGFCKARDFQQAYRLLD 57
Query: 280 DVVERGYIPCAMELSRFVASQCGKGK-------WKEVE-ELLSAVLDKGLLLDSFCCSSL 331
++ +RG +P + + C G+ +++++ +V+ +L+D+ C S+
Sbjct: 58 EMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSA- 116
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
R D ++ L IE + +V TY+ L++G K G M+EAV +F+ M E
Sbjct: 117 -------RISDASLILEDMIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 168
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ I++ C + + K EM+K G +P+ TY ++ +
Sbjct: 169 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 218
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 126/308 (40%), Gaps = 37/308 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y + DG ++ + M YG P N L+D+L + + A L M+R
Sbjct: 176 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 235
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
P+ FT++L+ + C+ G+ ++ L + L+ D
Sbjct: 236 RDCKPSHFTFNLMIDMFCKVGQLDLAYEL----------FQLMTD--------------- 270
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV--IQ 193
R P TY+ ++ GA R + + + +++ M E P ++ N V +
Sbjct: 271 ------RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG-CPPDVVTYNSIVSGLC 323
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
K S + + Y + + L TC ++ L K R+ +A ++ + G
Sbjct: 324 KASQVDEAYEVYEVLRNG---GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 380
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ CK Q ++ +++++G +P + S + C + ++ LL
Sbjct: 381 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 440
Query: 314 SAVLDKGL 321
+L++G+
Sbjct: 441 KTMLERGV 448
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 206/478 (43%), Gaps = 57/478 (11%)
Query: 15 LSLVLDCYSHKGLF---------MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
VL+ YS+ GL + +EVYR M + GF P++ ++L+ L ++ +I
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVID 120
L M G+ PN +T+++ ++L R+GK +E++ + D G V+ Y ++ID
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
A + +M GR+ P TY ++LD + ++ M + +
Sbjct: 304 ALCTARKLDCAKEVFAKMKTGRH-KPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHV 362
Query: 181 PK--HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P F D + K + G+ +A + + D+ I T ++ L + R+ +
Sbjct: 363 PDVVTFTILVD-ALCKAGNFGEAFAKLDVMR---DQGILPNLHTYNTLICGLLRVHRLDD 418
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A++I+ + G+ Y F++ K + +G P + + +
Sbjct: 419 ALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 478
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----------- 347
S G+ +E +++ + D GL+ DS + +M+ Y +ID+AI L
Sbjct: 479 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538
Query: 348 ------------------------HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++++++K V TY+ LL GL K+G+++EA+ +F
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ M + ++ +F + LC E+ A+K +M+ MG PD TY +I G +
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 656
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 178/440 (40%), Gaps = 58/440 (13%)
Query: 2 IQSCEGRDSQSDALSLVLDCYS---------HKGLFMDGLEVYRMMRVYGFVPAVSACNA 52
I+S G + + L L + Y+ G + E+ + M G P V
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DS 107
L+DAL ++ A ++ M P++ T+ + + + V D
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360
Query: 108 GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ V + +++D K G+FG AF +L+ M + + P TY++++ G R + + +
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVM-RDQGILPNLHTYNTLICGLLRVHRLDDA 419
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYV--IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
I M + P + Y+ I G + +A F++ + I C
Sbjct: 420 LEIFDNMESLGVKPTAY----TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 475
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYY-------------------------- 259
L +L+K GR +EA QI++ + + G+ V DS Y
Sbjct: 476 SLYSLAKAGRDREAKQIFYGLKDIGL-VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVEN 534
Query: 260 ----------AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ +N L K + +E + + E P + + +A GK +E
Sbjct: 535 CCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 594
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
EL ++ KG ++ ++L + C N ++ A+ + K+ + DV TY+ ++ G
Sbjct: 595 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 654
Query: 370 LFKDGRMEEAVRIFDYMKEL 389
L K+G+++EA+ F MK+L
Sbjct: 655 LVKNGQVKEAMCFFHQMKKL 674
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 158/387 (40%), Gaps = 47/387 (12%)
Query: 58 YRQNEIRLASCLYGAMVRD-GVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS 112
++ N A L+ +D GV P T++L+ L + E V L + ++G
Sbjct: 762 FKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPD 821
Query: 113 V-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS-DRI 170
V YN ++D Y K G F+ EM + P T++ ++ G + + + D
Sbjct: 822 VATYNFLLDAYGKSGKIDELFEIYKEM-SAHECEPNTITHNIVISGLVKAGNVDDALDLY 880
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
LM ++ P AC T G ++ L
Sbjct: 881 YDLMSDRDFSPT----------------------------AC---------TYGPLIDGL 903
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
SK GR+ EA Q++ +S+ G + Y +N K + + C L + +V+ G P
Sbjct: 904 SKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 963
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
S V C G+ E + + GL D C + ++ ++++A+ L +
Sbjct: 964 KTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNE 1023
Query: 351 IEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
++K +G + D+ TY+ L+ L G +EEA +I++ ++ + + +F ++
Sbjct: 1024 MKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1083
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ A + M+ G P+ TY+Q+
Sbjct: 1084 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 150/365 (41%), Gaps = 8/365 (2%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
RD S + ++ + H + + + G P + N L+ L + I +A
Sbjct: 748 RDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 807
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFY 122
++ + G P+ T++ + +SGK + + + +++ +N+VI
Sbjct: 808 DVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGL 867
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G+ A D ++ + R+ +P TY ++DG + + + ++ M + P
Sbjct: 868 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I G+ AA +FKR E + T ++ L GRV E +
Sbjct: 928 CAIY--NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRFVASQC 301
+ + E G+ Y +N L K H+ EE L ++ + RG P + + +
Sbjct: 986 FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G +E ++ + + GL + F ++L+ Y + + + A A++ + S +
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105
Query: 362 TYDVL 366
TY+ L
Sbjct: 1106 TYEQL 1110
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 192/469 (40%), Gaps = 85/469 (18%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+ +D Y G + LE + M+ G P + ACNA L +L + R A ++ +
Sbjct: 440 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 499
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAA 131
G+ P+ T++++ + + G+ + + LL + + ++ N +I+ K A
Sbjct: 500 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA 559
Query: 132 ---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---- 184
F R+ EM L P TY+++L G + K + + + MV+K P
Sbjct: 560 WKMFMRMKEM----KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 615
Query: 185 ----LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
L ND V T A +M+FK D T ++ L K G+VKEA+
Sbjct: 616 LFDCLCKNDEV---------TLALKMLFKMM-DMGCVPDVFTYNTIIFGLVKNGQVKEAM 665
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-LSRFV-- 297
+H ++ Y FV +C LL VV+ G I A + ++ F+
Sbjct: 666 CFFH-------QMKKLVYPDFVT----------LCTLLPGVVKAGLIEDAYKIIANFLYS 708
Query: 298 -ASQCGKGKWKEVEELLSAVLDKG-----------LLLDSFC------CSSLMEYYCSNR 339
A Q W E+L+ ++L + L+ + C ++ Y +
Sbjct: 709 CADQPANLFW---EDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHN 765
Query: 340 QIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE---LKVVSSS 395
A L K K G + TY++L+ GL + +E A +F +K + V++
Sbjct: 766 NASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATY 825
Query: 396 SFVIVV----SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+F++ ++ L E+ K M H+ +P+ T+ VISG +
Sbjct: 826 NFLLDAYGKSGKIDELFEIYKEMSAHE------CEPNTITHNIVISGLV 868
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 130/318 (40%), Gaps = 9/318 (2%)
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D ++F + NL T + +L+ R K E + LM +K+++ +
Sbjct: 99 DTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLM-QKRIIKR---D 154
Query: 187 GNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
N Y + + LS G A ++ + L + ++ L K EA+++Y
Sbjct: 155 TNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYR 214
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G Y + + L K E V GLL+++ G P + + G
Sbjct: 215 RMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 274
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K E E+L + D+G D + L++ C+ R++D A + K++ + D TY
Sbjct: 275 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYI 334
Query: 365 VLLDGLFKDGRMEEAVRIF--DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
LLD F D R ++V F + K+ V +F I+V LC +A D M
Sbjct: 335 TLLD-RFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRD 393
Query: 423 MGHKPDEATYKQVISGFM 440
G P+ TY +I G +
Sbjct: 394 QGILPNLHTYNTLICGLL 411
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 144/369 (39%), Gaps = 34/369 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D G F + +MR G +P + N L+ L R + + A ++ M
Sbjct: 367 TFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM 426
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
GV P +T Y + ID+Y K GD +A +
Sbjct: 427 ESLGVKPTAYT------------------------------YIVFIDYYGKSGDSVSALE 456
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+M + + P ++ L + + + +I + + L+P + +++
Sbjct: 457 TFEKM-KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY--NMMMK 513
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S +G+ A + + E ++ L K RV EA +++ + E +
Sbjct: 514 CYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 573
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y + L K + +E L +V++G P + + C + ++L
Sbjct: 574 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 633
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++D G + D F ++++ N Q+ +A+ +++KL D T LL G+ K
Sbjct: 634 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKA 692
Query: 374 GRMEEAVRI 382
G +E+A +I
Sbjct: 693 GLIEDAYKI 701
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR-ACDEKIELQDDTCGCMLKAL 230
G M+ K P S V+ D +++ FK A + + +TC ML+AL
Sbjct: 74 GSMIRKSSKPDLSSSEVARVLMSFPDTDSSFS---YFKSVAGNSNLVHTTETCNYMLEAL 130
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+G+++E ++ L+ +R I + Y L + + LR + E G++ A
Sbjct: 131 RVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNA 190
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + E E+ ++ G SSLM R I+ + L +
Sbjct: 191 YSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKE 250
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
+E L +V T+ + + L + G++ EA I M + ++ +++ LC ++
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L A + +M HKPD TY ++ F
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRF 340
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S+++DC G +GL +R ++ G P V N +++ L + + +
Sbjct: 957 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEE 1016
Query: 66 ASCLYGAMVRD-GVSPNKFTWSL------VAQILCRSGKF--EVVLGLLDSGIYSSVMYN 116
A L+ M + G++P+ +T++ +A ++ +GK E+ L+ +++ +N
Sbjct: 1017 ALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT---FN 1073
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
+I YS G A+ M G +P TY + + A
Sbjct: 1074 ALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNTGTYEQLPNRA 1114
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 184/428 (42%), Gaps = 23/428 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G +D L+++ M G P V LL ++ +++ A L +M
Sbjct: 213 NVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMED 272
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
G P++ T++ LC++G+ E + L +G + + Y+ +ID G +
Sbjct: 273 KGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYE 332
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
F E+ + +P Y+ ++ G + + + M EK+ P F
Sbjct: 333 EGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNT- 391
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L D G A + + L +T M+ L K+ V EA+Q++ + E
Sbjct: 392 -LLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEV 450
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGL-------------LRDVVERGYIPCAMELSRF 296
G Y ++ L + H+ EE L LR + + + L +
Sbjct: 451 GCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKL 510
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
V S C G+ + +LL ++D G++ D ++L+ C R +D A+ L +++
Sbjct: 511 VDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGF 570
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
SLD TY L+D L + R +A+ +F D + S S + ++ LC + +L +A+
Sbjct: 571 SLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAIN 630
Query: 416 N-HDEMLK 422
D +LK
Sbjct: 631 FWFDHLLK 638
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 180/456 (39%), Gaps = 61/456 (13%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEI-R 64
G + A ++ ++ G + ++ + RM +G P NA+L L +
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVI 119
LA LY MV G PN+ T++++ LC+ G L L D GI +V + +++
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
G A + LN M + P TY++ L G + +
Sbjct: 252 SSMCNAGQLKEAENLLNSM-EDKGCPPDEVTYNAFLSGLCKAGRV--------------- 295
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
D I++L + +T + K C++ L GR +E
Sbjct: 296 ---------DEAIERLEALRRTGTFVLGLK------------GYSCLIDGLFLAGRYEEG 334
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEH-QPEEVCGLLRDVVERGYIPCAMELSRFVA 298
Q Y + E+ D Y + C E + ++ ++ E+ + P + +
Sbjct: 335 FQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLK 394
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C G L+S + ++LD+ + ++ C + +D+A+ + + ++
Sbjct: 395 ALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHP 454
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKEL---------------KVVSSSSFVIVVSR 403
V TY+VL+DGL++ R+EEA +F Y E+ +V S S +V
Sbjct: 455 TVMTYNVLIDGLYRAHRLEEARMLF-YKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDS 513
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+C ++ KA K ++ G PD TY +++G
Sbjct: 514 MCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGL 549
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 169/404 (41%), Gaps = 42/404 (10%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
+ G D + M+ F P N LL AL ++ A L M ++ V +
Sbjct: 362 AEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDT 421
Query: 83 FTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNE 137
T +++ LC+ +V G+++ G + +VM YN++ID + A +
Sbjct: 422 NTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYK 481
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M G N S + + GA + + +E ++V M +
Sbjct: 482 MEVGNNP----SLFLRLTLGANQVKDSESLQKLVDSMCQS-------------------- 517
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A + + D + T +L L K + A++++ + +G ++ +
Sbjct: 518 -GQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEIT 576
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ L + H+ + L +D++ G P + + S C + ++ + ++
Sbjct: 577 YGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLC---RMNKLSQAINFWF 633
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQ------IDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
D LL + S+ E S R+ +D+A+ IKI++ GS++ Y + L GL
Sbjct: 634 DH--LLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLI 691
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR-LCHLKELRKAM 414
+ R+++A++IF ++E + + + +S+ LC K L A+
Sbjct: 692 QARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAV 735
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 143/366 (39%), Gaps = 78/366 (21%)
Query: 16 SLVLDCYSH---------KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
++VLD +H K L + ++V+ M G P V N L+D LYR + + A
Sbjct: 416 NVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEA 475
Query: 67 SCLYGAMVRDGVSPNKF--------------TWSLVAQILCRSGK----FEVVLGLLDSG 108
L+ M G +P+ F + + +C+SG+ ++++ G++DSG
Sbjct: 476 RMLFYKM-EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSG 534
Query: 109 IYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM-CNGRNL---------------------- 144
+ V+ YN +++ K + A E+ G +L
Sbjct: 535 VVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAM 594
Query: 145 -----------TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
TP S Y+SI+ R K + + + LL K+ LS D VI
Sbjct: 595 TLFQDILHIGGTPSLSIYNSIMRSLCRMNKLS---QAINFWFDH-LLKKYNLSAQDEVIA 650
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQD-----DTCG--CMLKALSKEGRVKEAIQIYHLI 246
+ E A E I++ ++C L L + R+ +A++I+H++
Sbjct: 651 S----ARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHIL 706
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
E GI + + LC E + ++ + + +I +R ++S C + +
Sbjct: 707 EESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNRLLSSLCIRHRR 766
Query: 307 KEVEEL 312
K+ + L
Sbjct: 767 KDAQAL 772
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 213/554 (38%), Gaps = 143/554 (25%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + LE + MR G P V L+ AL A L+G M G PN +T+
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF------------ 128
+++ LC+ G+ + L +L+ G+ SV+ +N +I Y K+G
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388
Query: 129 -------------------GAAFDR----LNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G + DR LN+M + L+P TY++++ G +
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK-LSPDVVTYNTLIHGLCEVGVVD 447
Query: 166 VSDRIVGLMVEKKLLPKHF-----------------------------LSGNDYVIQKLS 196
+ R+ LM+ P + + N++ L
Sbjct: 448 SASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507
Query: 197 D----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
D GK A +FKR E+ T M+ L KEG+V++A+ + +++ +
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVK 567
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y V + KE+ + +L ++ GY P + + F+ + C +G+ +E EE+
Sbjct: 568 PTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEM 627
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL---------------------HIKI 351
+ + ++G+LLDSF + L+ Y +D A + H+ I
Sbjct: 628 VIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVI 687
Query: 352 EKLK--GS----LDVA-------------------------------------TYDVLLD 368
EK K GS LDV+ TY L++
Sbjct: 688 EKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLIN 747
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVI---VVSRLCHLKELRKAMKNHDEMLKMGH 425
GL K GR+ A ++ +M+E + S S +I ++S C L +A+ D M++ H
Sbjct: 748 GLCKVGRLNVAFSLYHHMREGGI--SPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSH 805
Query: 426 KPDEATYKQVISGF 439
+YK +I G
Sbjct: 806 LAHLESYKLLICGL 819
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 204/461 (44%), Gaps = 67/461 (14%)
Query: 29 MDGLEVYRMMRVYGFVP-AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN------ 81
+ L +R +R + P +++ ++LL L R +R A + +M++ SP+
Sbjct: 67 LTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLL 126
Query: 82 -------------------KFTWSLVAQ---ILCRSGKFEVVLGLL--------DSGIYS 111
F SL + ++C S +F +V ++ D+G +
Sbjct: 127 NLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLS-RFSMVDEMISLYKEMLTDNG--N 183
Query: 112 SVMYNLV-----IDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
SV NL+ ++ Y K G+ A F R+ G P TY+S++ G R +
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPG----PDLFTYTSLVLGYCRNDD 239
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
E R G+ ++P+ +I L + GK + A + R ++ T
Sbjct: 240 VE---RACGVFC---VMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTY 293
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ AL + GR EA+ ++ + ERG Y ++ LCKE + +E +L ++VE
Sbjct: 294 TVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVE 353
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
+G P + + + S C +G ++ +L + K + + + L+ +C + +D+
Sbjct: 354 KGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDR 413
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVI 399
A+AL K+ + K S DV TY+ L+ GL + G ++ A R+F M + ++F++
Sbjct: 414 AMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMV 473
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGH-KPDEATYKQVISGF 439
+ R+ + E + + E LK H K +E Y +I G+
Sbjct: 474 CLCRMGRVGEAHQIL----ESLKEKHVKANEHAYTALIDGY 510
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/437 (17%), Positives = 191/437 (43%), Gaps = 50/437 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + N +L++ + + +A + ++R P+ FT++ + CR+ E G+
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246
Query: 105 L------DSGIYSSVMYNL--------VIDFYSKKGDFGA-------------------- 130
++ Y+++++ L ++F+++ + G
Sbjct: 247 FCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRE 306
Query: 131 --AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK----KLLPKHF 184
A EM R P TY+ ++D + + + + +++ MVEK ++P +
Sbjct: 307 LEALSLFGEM-RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG-CMLKALSKEGRVKEAIQIY 243
L G+ Y + + + M K+ C + CG C K++ + A+ +
Sbjct: 366 LIGS-YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDR------AMALL 418
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + E ++ Y ++ LC+ + L R ++ G+ P + F+ C
Sbjct: 419 NKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRM 478
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ E ++L ++ +K + + ++L++ YC +I+ A +L ++ + + T+
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+V++DGL K+G++++A+ + + M + V + ++ I+V + + +A + + ++
Sbjct: 539 NVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598
Query: 423 MGHKPDEATYKQVISGF 439
G++P+ TY I +
Sbjct: 599 SGYQPNVVTYTAFIKAY 615
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 156/384 (40%), Gaps = 49/384 (12%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S ++++D +G D + + M + P + N L++ + ++ + A+ +
Sbjct: 533 PNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEI 592
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIY-SSVMYNLVIDFYSK 124
++ G PN T++ + C G+ E +V+ + + G+ S +YNL+I+ Y
Sbjct: 593 LNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGC 652
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G +AF L M G P + TYS ++ + + VGL V
Sbjct: 653 MGLLDSAFGVLRRMF-GTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLT-----N 706
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+S ++ I D G T ++F++ + +T ++ L K GR+ A +YH
Sbjct: 707 ISVDNTDIWSKIDFGIT---TVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYH 763
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ E GI+ + + + ++ CK E LL ++E ++ L + CG
Sbjct: 764 HMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLA---HLESYKLLICG-- 818
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
L ++K +KA A+ + + + D +
Sbjct: 819 --------LFEQMNK----------------------EKAEAVFCSLLRCGYNYDEVAWK 848
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKE 388
VL+DGL K G +++ + + M++
Sbjct: 849 VLIDGLAKTGYVDQCSELLNLMEK 872
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 155/404 (38%), Gaps = 55/404 (13%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ A + ++D Y G +++ M +P N ++D L ++ +++ A L
Sbjct: 498 ANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLL 557
Query: 70 ---------------YGAMVRD--------------------GVSPNKFTWSLVAQILCR 94
Y +V + G PN T++ + C
Sbjct: 558 VEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCS 617
Query: 95 SGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G+ E+V+ + + G+ S +YNL+I+ Y G +AF L M G P +
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF-GTGCEPSYL 676
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TYS ++ + + VGL V +S ++ I D G T ++F+
Sbjct: 677 TYSILMKHLVIEKHKKEGSNPVGLDVSLT-----NISVDNTDIWSKIDFGIT---TVLFE 728
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + +T ++ L K GR+ A +YH + E GI+ + + + ++ CK
Sbjct: 729 KMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLG 788
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCG---KGKWKEVEELLSAVLDKGLLLDSF 326
E LL ++E ++ L + CG + ++ E + ++L G D
Sbjct: 789 MFGEAVTLLDSMMECSHLA---HLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L++ +D+ L +EK L TY +L+ L
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 189/461 (40%), Gaps = 62/461 (13%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y +G+ ++ + ++ M G P + L+D R+ + A M +DG+ PN
Sbjct: 168 YFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPN 227
Query: 82 KFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + C+ GK + L + GI MY +ID + +GD F L
Sbjct: 228 LVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+M R ++P TY+SI++G R E EVS I G V
Sbjct: 288 DM-EKRGISPSIVTYNSIINGLCKAGRTSEADEVSKGIAGDAV----------------- 329
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDD-------TCGCMLKALSKEGRVKEAIQIYHL 245
S + Y E K + K L++D C ++KAL G +++A Y
Sbjct: 330 -TFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKG 388
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV------------VERGYIPCAME- 292
+S + Y +N C+ + EE + + V+ G+ P M
Sbjct: 389 MSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRS 448
Query: 293 -------------LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ S G+ + +L+ + ++D S +++ C
Sbjct: 449 IHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEG 508
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+DKA+ L ++K +L++ Y+ +++GL + G + +A R+FD ++++ +V S ++
Sbjct: 509 HLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYA 568
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC L A + ++M+ G P+ Y +I G+
Sbjct: 569 TLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGY 609
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 181/462 (39%), Gaps = 63/462 (13%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ KG + +++M+ G L+D + +I L M + G+SP+
Sbjct: 238 FCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPS 297
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
T++ + LC++G+ EV G+ + S + + I+ + KG RL E
Sbjct: 298 IVTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETK-RRLEE 356
Query: 138 --------MCN-----------------------GRNLTPGFSTYSSILDGARRYEKTEV 166
MCN G +L TY ++++G R + E
Sbjct: 357 DGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEE 416
Query: 167 SDRIVG------------LMVEKKLLPKHFLSGNDY------------VIQKLSDMGKTY 202
+ I V++ P S ++ V++ L G+
Sbjct: 417 ALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRIL 476
Query: 203 AAEMIFKRACDEKIELQDDT-CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A + A +E + + D M+ L KEG + +A+ + + ++GI + Y +
Sbjct: 477 DAYKLVIGA-EENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSV 535
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N LC++ + L + + +P + + + S C +G + ++L ++ KG
Sbjct: 536 INGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGF 595
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ +SL++ YC +++A+ L I ++ D T L++G G ME A+
Sbjct: 596 NPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALG 655
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
F K+ ++ F+ +V LC + +A EML+
Sbjct: 656 FFFEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQ 697
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 158/403 (39%), Gaps = 24/403 (5%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
LE R + G + CN ++ AL + A Y M + + T+ +
Sbjct: 348 LETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMING 407
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
CR + E L + D +S+ + F+ ++G F ++E +T F
Sbjct: 408 YCRVSRIEEALEIFDEFRKTSISSCYL--FFVQEGFFPGCMRSIHEN-EKETITVAFPV- 463
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
S+L ++ + + ++V + ++ LP L +I L G A +
Sbjct: 464 -SVLKSLKKNGRILDAYKLV--IGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFV 520
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ I L ++ L ++G + +A +++ + + + + Y ++ LCKE
Sbjct: 521 KKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCL 580
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ L +V +G+ P + + C G +E LL + + + D F S+L
Sbjct: 581 LDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSAL 640
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM----- 386
+ YC ++ A+ + +K D + L+ GL GRMEEA I M
Sbjct: 641 INGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRS 700
Query: 387 ---------KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
E++ S SF+I LC +++A+ +E+
Sbjct: 701 VLELINRVDTEIETESVESFII---SLCEQGSIQEAVTVLNEV 740
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 41/300 (13%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LP-KHFLSGNDYVIQKLSDMGKT 201
+ P T+ S++ K + ++ LM K+ P +F+S + VI + K
Sbjct: 46 ILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSS--VISGFCKISKP 103
Query: 202 YAAEMIFKRACDEKIELQD-DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A F+ A + ++ + TC +L AL + GRV+E + + ER V D +Y+
Sbjct: 104 QLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWM-EREEFVFDVVFYS 162
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+CG R+ V +E R K KE+ ++KG
Sbjct: 163 -----------SWICGYFREGV-------LVEAIR---------KHKEM-------IEKG 188
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D+ + L++ + ++KAI K++K ++ TY ++ G K G+++EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ L + V +V ++ C ++ ++M K G P TY +I+G
Sbjct: 249 TLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGL 308
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 183/419 (43%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A ++D +++ ++ A L+ MV+ G+ P+ T+S V
Sbjct: 207 DLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 266
Query: 91 ILCRS---GKFEVVL-GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ GK E L +++ G+ + YN +I YS G + A EM ++
Sbjct: 267 ALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSIL 325
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P T + ++ +Y K + + + M K P F + N Y + L DM
Sbjct: 326 PDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD- 384
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 385 -----LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTV 439
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G P + C G + +EL+ +++ G+
Sbjct: 440 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGM 499
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD SS++ C +I A + + D Y +L+DG G+ME+A+R
Sbjct: 500 RLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALR 559
Query: 382 IFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 182/413 (44%), Gaps = 60/413 (14%)
Query: 77 GVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG----IYSSVMYNLVIDFYSKKGDFG 129
G P+ F++S++ + LC +SG+ + +L ++ G V Y VID + K+GD
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVN 240
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A D EM R + P TYSS++ + ++ + MV K +LP ++ N
Sbjct: 241 KACDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN- 298
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I S G+ A +FK I T ++ +L K G++KEA ++ ++ +
Sbjct: 299 -LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMK 357
Query: 250 G---------------------ITVRD-----------SDYYAFVNVLCKEHQPEEVCGL 277
G + + D D Y F +VL K + CG+
Sbjct: 358 GQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF-SVLIKAYAN---CGM 413
Query: 278 L-------RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
L ++ + G P + + +A+ C GK + E + ++D+G+ D +
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L++ +C++ + KA L ++I LD+ + +++ L K GR+ +A IFD
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN-- 531
Query: 391 VVSSSSFVIVVSRL----CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V +V S L C + ++ KA++ D M+ G +P+ Y +++G+
Sbjct: 532 -VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 161/378 (42%), Gaps = 33/378 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G++ + ++L+ Y+ KG +D +++ +M G P + + L+ A +
Sbjct: 357 KGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDK 416
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A ++ M GV P+ T++ V LCR GK + + + +++
Sbjct: 417 AMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAM-----------------EKFNQM 459
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A D+ C L GF T+ S+L + + I+ +M L F
Sbjct: 460 IDQGVAPDKYAYHC----LIQGFCTHGSLL---------KAKELILEIMNNGMRLDIVFF 506
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I L +G+ A+ IF + ++ G++++A++++
Sbjct: 507 SS---IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI Y VN CK + +E L R+++++G P + + + G+
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ ++ + ++ + NR D+AI L ++ + +D+ T +
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683
Query: 366 LLDGLFKDGRMEEAVRIF 383
++ G+F+ R+EEA +F
Sbjct: 684 MIAGMFQTRRVEEAKDLF 701
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 152/355 (42%), Gaps = 52/355 (14%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 96 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANH 155
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
L G + K +D A +++ R + + +LK+L +G+ +A +
Sbjct: 156 LLKG--FCEAKRTD----EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL 209
Query: 244 HLISERGITVRDSDYYAFVNVL-C--KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++E G V D A+ V+ C KE + C L +++V+RG P + S V +
Sbjct: 210 RMMAEGG-AVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 268
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C + E L +++KG+L D++ ++L+ Y S Q +A+ + ++ + DV
Sbjct: 269 CKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 328
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMK---------ELKVVSSS---------------- 395
T ++L+ L K G+++EA +FD M K++ +
Sbjct: 329 VTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDL 388
Query: 396 -----------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F +++ + L KAM +EM G KPD TY VI+
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 160/379 (42%), Gaps = 16/379 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + + V++ MR + +P V N L+ +L + +I+ A ++ M G +P+
Sbjct: 303 YSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 362
Query: 82 KFTWSLVAQILCRSG-------KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFD 133
F++ ++ G F+++LG GI + ++++I Y+ G A
Sbjct: 363 VFSYKIMLNGYATKGCLVDMTDLFDLMLG---DGIAPDIYTFSVLIKAYANCGMLDKAMI 419
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
NEM + P TY++++ R K + + M+++ + P + +IQ
Sbjct: 420 IFNEM-RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY--AYHCLIQ 476
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
G A+ + + + L ++ L K GR+ +A I+ L G
Sbjct: 477 GFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHP 536
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ C + E+ + +V G P + V C G+ E L
Sbjct: 537 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLF 596
Query: 314 SAVLDKGLLLDSFCCSSLME-YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+L KG+ + + +++ + + R + + H E +++ TY+++L G FK
Sbjct: 597 REMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES-GIAINKCTYNIVLRGFFK 655
Query: 373 DGRMEEAVRIFDYMKELKV 391
+ +EA+ +F ++ + V
Sbjct: 656 NRCFDEAIFLFKELRAMNV 674
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 128/320 (40%), Gaps = 43/320 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S+++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI------YSS----------- 112
+ GV+P+K+ + + Q C G E++L ++++G+ +SS
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519
Query: 113 -------------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
V+Y++++D Y G A + M + + P Y +
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVVYGT 578
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + + + M++K + P L + +I L G+T A++ F +
Sbjct: 579 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY--NIIIDGLFVAGRTVPAKVKFHEMTE 636
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
I + T +L+ K EAI ++ + + + + + + + EE
Sbjct: 637 SGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 696
Query: 274 VCGLLRDVVERGYIPCAMEL 293
L + G +PC + +
Sbjct: 697 AKDLFASISRSGLVPCVVTV 716
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 181/398 (45%), Gaps = 4/398 (1%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P V+ N + L + I A+ L M+ G +PN FT+ ++ LCR GK +
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359
Query: 102 LGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
LL+ + V++N +I+ Y +G A ++E P TY++++ G +
Sbjct: 360 RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ ++ M K P + +I + G+ A + + + L
Sbjct: 420 KGYLVSARELMNEMQIKGCEPN--VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
C++ AL K+ +V++A+ ++ +S +G + + + LCK ++ EE GL +D
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++ G I + + + + +G +E +L++ +L +G LD + L++ C
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVI 399
I+K +AL + + + + ++L++GL + G ++ A+ D + ++
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+++ LC ++A+ D++ G PD TY +IS
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 190/448 (42%), Gaps = 27/448 (6%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIR 64
EG + L++ Y GL + MR VY P + N +LD L N +
Sbjct: 158 EGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPK 217
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVI 119
+ ++ M+ G+SP +T+ +V + LC + + LL + ++++Y +I
Sbjct: 218 VVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLI 277
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLT------PGFSTYSSILDGARRYEKTEVSDRIVGL 173
SK G R+NE+ P +T++ + G + + + ++V
Sbjct: 278 HALSKVG-------RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 330
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+ + P F G ++ L MGK A M+ + + + L + ++
Sbjct: 331 MLLRGFTPNSFTYG--VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT----LINGYVSR 384
Query: 234 GRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
GR+ EA + H + G Y + LCK+ L+ ++ +G P +
Sbjct: 385 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 444
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C +G+ +E +L + KGL L++ + L+ C + ++ A+ + +
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELR 411
D+ T++ L+ GL K + EEA+ ++ D + E + ++ ++ ++ ++
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 564
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A+K ++ML G D+ TY +I
Sbjct: 565 EALKLVNDMLFRGCPLDDITYNGLIKAL 592
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 152/341 (44%), Gaps = 9/341 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLA-SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P V N L++ + + A + ++ +M+ G P+ FT++ + LC+ G
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428
Query: 104 LLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L++ G +V+ Y ++ID + K+G A + L+EM +G+ L Y+ ++
Sbjct: 429 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM-SGKGLALNAVGYNCLISAL 487
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ EK + + + G M K P F + +I L + K A +++ E +
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTF--NSLIFGLCKVNKFEEALGLYQDMLLEGVIA 545
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ A + G ++EA+++ + + RG + D Y + LC+ E+ L
Sbjct: 546 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 605
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
D++ +G P + + + C G + E L ++ +GL D +SL+ C
Sbjct: 606 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 665
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ +A+ L K++ D TY+ L+ K+G ++A
Sbjct: 666 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 706
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 129/326 (39%), Gaps = 46/326 (14%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I+ CE ++++D + +G + V M G N L+ AL +
Sbjct: 435 IKGCE---PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG-----LLDSGIYSSVMYN 116
+++ A ++G M G P+ FT++ + LC+ KFE LG LL+ I +++ YN
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+I + ++G A +N+M R TY+ ++ R E + M+
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDML-FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
K L P + +C ++ L + G +
Sbjct: 611 KGLNPNNI-------------------------------------SCNILINGLCRTGNI 633
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ A++ + RG+T Y + +N LCK + +E L + G P A+ +
Sbjct: 634 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 693
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLL 322
++ C +G + + LLS +D G +
Sbjct: 694 ISWHCKEGMFDDAHLLLSRGVDSGFI 719
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + +++++ G LE R M G P + N+L++ L + +
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 670
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVID 120
A L+ + +G+ P+ T++ + C+ G F+ LL G+ S + N +++
Sbjct: 671 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730
Query: 121 FYSKKGD 127
+ K+GD
Sbjct: 731 NFIKEGD 737
>gi|297834586|ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331015|gb|EFH61434.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 653
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 193/452 (42%), Gaps = 52/452 (11%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V+ + G P+ NA++DAL + N + LA + M D P++FT++++ +
Sbjct: 160 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGV 219
Query: 93 CRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G + + L+ G +V Y ++ID + G A +L EM R L P
Sbjct: 220 CKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQL-EMMQVRKLNPN 278
Query: 148 FSTYSSILDGARR-YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD--MGKTYAA 204
+T +++ G R E + ++G M + +L + D V+ LS+ M K A
Sbjct: 279 EATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQR---VAYDTVLYCLSNNSMAKETA- 334
Query: 205 EMIFKRACDEKIELQD------------------DTCG---CMLKALSKEGRVKEAIQIY 243
+F R E+ + D +TCG C + +K G + +
Sbjct: 335 --LFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQ 392
Query: 244 HLISERGITVRDS---------------DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L++ + + D Y A ++ LCK + E L ++ +RG P
Sbjct: 393 ALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISP 452
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + F++ G K+V ++ +L+ G D S ++ C ++I A
Sbjct: 453 NLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCF 512
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHL 407
++ + + TY++L+ G +V++F MKE + + ++ ++ C +
Sbjct: 513 KEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKM 572
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+++KA + ML++G KPD TY +I
Sbjct: 573 KKVKKAEELLKTMLRIGLKPDNFTYSTLIKAL 604
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 156/410 (38%), Gaps = 41/410 (10%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG+ + + + + M G P V L+D I A M ++PN+ T
Sbjct: 222 KGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLNPNEAT 281
Query: 85 W-SLVAQI---LCRSGKFEVVLGLLDSG------IYSSVMYNLVID--------FYSKKG 126
+LV I L FEV+LG ++ Y +V+Y L + F K G
Sbjct: 282 IRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDTVLYCLSNNSMAKETALFLRKTG 341
Query: 127 D---------FGAAFD------RLNEMCN------GRNLTPGFSTYSSILDGARRYEKTE 165
+ F AA + L E C R PGF+ Y ++ ++
Sbjct: 342 ERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQALLNAQRFS 401
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
DR + M LL + + VI L +T A M D I T
Sbjct: 402 AGDRYLKQMGGDGLLSSVYTY--NAVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNT 459
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
L S G VK+ + + E G + +N LC+ + ++ ++++E G
Sbjct: 460 FLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 519
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + S C G +L + + + GL + + +++++ +C +++ KA
Sbjct: 520 IKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKMKKVKKAE 579
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
L + ++ D TY L+ L + GR EA +F M+ V S
Sbjct: 580 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVPDS 629
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 133/323 (41%), Gaps = 12/323 (3%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
Q A VL C S+ + + R G++P S NA ++ L + + + ++
Sbjct: 313 QRVAYDTVLYCLSNNSMAKETALFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIF 372
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEV----VLGLLDSGIYSSV-MYNLVIDFY--S 123
V G P + ++ Q L + +F + + G+ SSV YN VID +
Sbjct: 373 DCFVSRGAKPGFNGYLVLVQALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKA 432
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++ + A F L EM R ++P T+++ L G + +V ++E P
Sbjct: 433 RRTEHAAMF--LTEM-QDRGISPNLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPD- 488
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I L + A FK + I+ + T ++++ G +++++
Sbjct: 489 -VITFSLIINCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLF 547
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ E G++ Y A + CK + ++ LL+ ++ G P S + +
Sbjct: 548 ANMKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSES 607
Query: 304 GKWKEVEELLSAVLDKGLLLDSF 326
G+ E E+ S++ G + DS+
Sbjct: 608 GRESEAREMFSSMERHGCVPDSY 630
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 186/428 (43%), Gaps = 55/428 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S ++ + G +GL +Y+ M FVP + N L+D+L + +++
Sbjct: 59 EGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEE 118
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI----------YSSVM- 114
A ++G M + VSP+ +T++++ + L G+ + V+ L +S Y SVM
Sbjct: 119 ACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMH 178
Query: 115 -----------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
YN++ID + K G AFD + + R+ T
Sbjct: 179 AFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGK---SRSFT 235
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
TY+S+L R + + G M K L+ +I++L G+
Sbjct: 236 NEV-TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYA--ILIERLGWAGRVEDVW 292
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ D I+ T +L LSK GRV+ A +++ + +G+ Y +N L
Sbjct: 293 QLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGL 352
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE---ELLSAVLDKGLL 322
+ + + LL ++ E G P + + ++S GKW + L + ++G+
Sbjct: 353 GRAGKLDAAGALLLEMEENGCAPNIITYNTLISSY---GKWSNLSAATRLFLEMKERGVA 409
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ SSL+E + + D AI+L +++ + TY++L+D L + GR A+
Sbjct: 410 PNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAM-- 467
Query: 383 FDYMKELK 390
+Y++E++
Sbjct: 468 -EYLREMR 474
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/404 (18%), Positives = 169/404 (41%), Gaps = 30/404 (7%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----- 105
N L+ N + A A ++G P +T+S + Q+ + G +V GLL
Sbjct: 34 NTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGG--DVQNGLLMYKQM 91
Query: 106 --DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN------GRNLTPGFSTYSSILDG 157
+ +N++ID +K D++ E CN N++P TY+ ++
Sbjct: 92 LKAKFVPDHTTFNILIDSLAKA-------DQVEEACNVFGDMFKLNVSPDVYTYTILIRS 144
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + ++ M + P F + V+ G+ A IF++ + ++
Sbjct: 145 LGTIGRIDAVMKLFESMTAQGCQPNLFTYHS--VMHAFGSAGRVDEACDIFQQMVQKGLQ 202
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ A K G+++ A + + + + Y + ++ L ++ + + L
Sbjct: 203 PDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMEL 259
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +G + + + + G+ ++V +L ++D + D +++++
Sbjct: 260 FGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSK 319
Query: 338 NRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
+++ A L + K KG + D TY++L++GL + G+++ A + M+E +
Sbjct: 320 AGRVEAAFELFQDM-KFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNII 378
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++S L A + EM + G P+ +Y +I GF
Sbjct: 379 TYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGF 422
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
++ +V+ L+ ++ LD+ ++L+ Y ++KA+ K G TY
Sbjct: 10 RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
++ K G ++ + ++ M + K V ++F I++ L ++ +A +M K+
Sbjct: 70 SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129
Query: 424 GHKPDEATYKQVI 436
PD TY +I
Sbjct: 130 NVSPDVYTYTILI 142
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 185/451 (41%), Gaps = 26/451 (5%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEV-YRMMRVYGFVPAVSACNALLDALYRQNE 62
S G L ++ Y+ G+ ++ R+ YG +P V+ CN LL L Q
Sbjct: 125 SLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRR 184
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNL 117
A LY M+ + + ++ ++ + LC G+ E L L+++ I V YN+
Sbjct: 185 WDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNV 244
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
+ID Y ++GD G L EM + P TY S+++ + E +I L +E
Sbjct: 245 LIDGYCRRGDMGRGLLLLGEM-EAKGFLPTLVTYGSLINCLGKKGDLE---KIGSLFLEM 300
Query: 178 KLLPKHFLSGNDYVIQKLSD-MGKTYAA-------EMIFKRACDEKIELQDDTCGCMLKA 229
+ K LS N + + D + K ++A + +F CD I T ++
Sbjct: 301 R---KRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDI----ITFNTLITG 353
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L EG V++A R + Y ++ C + LL +++ RG+ P
Sbjct: 354 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPD 413
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + GK E + + ++ + D + L+ C + A +
Sbjct: 414 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILE 473
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
++ + D Y L+DG + + +A +IF++M+ V S ++ C
Sbjct: 474 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFG 533
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A+ M K+G PDE TY VISG+
Sbjct: 534 MMSEAILCMSNMRKVGCIPDEFTYTTVISGY 564
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/476 (19%), Positives = 170/476 (35%), Gaps = 55/476 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C KG ++ MR G P V N+++DAL + A + M G
Sbjct: 280 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 339
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAF 132
P+ T++ + LC G L I + + Y +I + +G+ AA
Sbjct: 340 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAAS 399
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP----------- 181
D L EM GR TP T+ +++ G K + + M E+++ P
Sbjct: 400 DLLMEMM-GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 458
Query: 182 ---KHFLSGNDYVIQKLSDMGK-----TYA--------------AEMIFKRACDEKIELQ 219
KH L +++++ + YA A IF+ + +
Sbjct: 459 LCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPD 518
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+C M+K + G + EAI + + G + Y ++ K+ L
Sbjct: 519 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 578
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV----LDKGLLLDSFCCSSLM--- 332
D+++R P + S + C G E L + + L ++ + SL
Sbjct: 579 DMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKD 638
Query: 333 ---------EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
E N + LH + L + + G+ V
Sbjct: 639 KVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFK 698
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +S++ ++ LC LR+A+ + M K G+ P+ T+ ++ GF
Sbjct: 699 KLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGF 754
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 110/288 (38%), Gaps = 31/288 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +++ M G P + +CNA++ + + A M + G P++FT++ V
Sbjct: 502 DARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 561
Query: 90 QILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ G L L I + V Y+ +I+ Y K GD +A M L
Sbjct: 562 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM-QAEAL 620
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY+ ++ + +K + GL E LL + S ND + L + G T
Sbjct: 621 SPNVVTYTILIGSLFKKDKVLRA----GLYFETMLL--NHCSPNDVTLHYLVN-GLTSCT 673
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ C E+ G+ + L+ + G R+S Y A +
Sbjct: 674 PCVINSICCNTSEVH--------------GKDALLVVFKKLVFDIG-DPRNSAYNAIIFS 718
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK---WKEV 309
LC+ + E + ++GY+P + + C GK W+ +
Sbjct: 719 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTI 766
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 186/447 (41%), Gaps = 47/447 (10%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
RM + G P V + ++ L+ + EI A L+ MV+ GV PN T++ + LC++
Sbjct: 261 RMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKA 320
Query: 96 ---GKFEVVL-GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
K E+VL + D+ I V Y +I YS G + A EM L P T
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR-EGLIPDIVT 379
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++S++D ++++++ + I + K P + ++ + G+ +F
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPD--IISYSILLHGYATEGRFVDMNNLFHS 437
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
D I ++ A +K G + EA+ I+ + +G++ Y + LC+ +
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL-------- 322
+ L ++ G P + + C G + +EL+S ++D+G+
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557
Query: 323 ----------------------------LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
D F +SL++ YC ++DKA + +
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRK 412
DV TY L++G FK GR+++ + +F M K +K ++ ++ +V+ L
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK-PTTVTYSLVLDGLFRAGRTSA 676
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A K EM++ G +TY ++ G
Sbjct: 677 AKKMFHEMIESGTAMSISTYTIILQGL 703
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 166/396 (41%), Gaps = 48/396 (12%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DS 107
L+D R L + ++R G+ + + + LC + + + L +L +
Sbjct: 171 LMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSEL 230
Query: 108 G-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
G + + YN VI A D L M G +P +Y+ ++ G + + E+
Sbjct: 231 GCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL--FMEGEI 288
Query: 167 SD--RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
S + MV+K ++P + + ++ L AE++ ++ D I+ + T
Sbjct: 289 SKACNLFNEMVQKGVVPN--VVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M+ S GR KEA +++ ++ G+ + + ++ LCK + +E + + +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G+ P + S + +G++ ++ L ++ D G++ DS C
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC----------------- 449
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+++L++ K G M+EA+ IF M+ V + ++ V++
Sbjct: 450 ------------------FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAA 491
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC + L AM+ +M+ +G KP+ Y +I GF
Sbjct: 492 LCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGF 527
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 167/391 (42%), Gaps = 45/391 (11%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + ++++ M G +P + N+L+D+L + + A+ ++ ++ G P+
Sbjct: 352 YSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPD 411
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLN 136
++S++ G+F + + D+GI + S +N++I+ ++K+G A
Sbjct: 412 IISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFT 471
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM G+ ++P TY++++ R + + + M+ L P + + +IQ
Sbjct: 472 EM-RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS--LIQGFC 528
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDT-CGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G A+ + D+ I + T ++ +L EGRV A +++L
Sbjct: 529 THGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL---------- 578
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
V+ G P + + C GK + +L A
Sbjct: 579 -------------------------VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDA 613
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ G D S+L+ Y + +ID + L ++ + TY ++LDGLF+ GR
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673
Query: 376 MEEAVRIFDYMKEL-KVVSSSSFVIVVSRLC 405
A ++F M E +S S++ I++ LC
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLC 704
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 165/422 (39%), Gaps = 50/422 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + S +++++ ++ +G+ + L ++ MR G P V ++ AL R +
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-------YSSVM 114
A M+ G+ PN + + Q C G E+V ++D GI +SS++
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560
Query: 115 ------------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+N +ID Y G AF L+ M +
Sbjct: 561 HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA-GT 619
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---DYVIQKLSDMGKT 201
P TYS++++G ++ + D GL++ +++L K V+ L G+T
Sbjct: 620 EPDVVTYSTLING--YFKSGRIDD---GLILFREMLCKRVKPTTVTYSLVLDGLFRAGRT 674
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
AA+ +F + + T +L+ L + EAI ++H + + +
Sbjct: 675 SAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTM 734
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ L K + EE L V G +P A + + +G +E + + S++ G
Sbjct: 735 IHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGC 794
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
S + ++ +I KA K++ SL+ +T +L+ GR E ++
Sbjct: 795 APSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIK 854
Query: 382 IF 383
Sbjct: 855 FL 856
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 174/440 (39%), Gaps = 45/440 (10%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ +G + S++L Y+ +G F+D ++ M G V N L++A ++ +
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMM 463
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLV 118
A ++ M GVSPN T++ V LCR G+ + L I ++V+Y+ +
Sbjct: 464 DEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSL 523
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I + GD A + ++EM + P + +SSI+ + + + L++
Sbjct: 524 IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIG 583
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P F + +I +GK A + E T ++ K GR+ +
Sbjct: 584 DRPDIFTFNS--LIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDD 641
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC-GLLRDVVERGYIPCAMELSRFV 297
+ + F +LCK +P V L+ D + R
Sbjct: 642 GLIL------------------FREMLCKRVKPTTVTYSLVLDGLFRA------------ 671
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
G+ +++ +++ G + + +++ C N D+AI L K+ +
Sbjct: 672 ------GRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLK 725
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKN 416
++A + ++ L+K R EEA +F + +V ++S++ +++ L + +A
Sbjct: 726 FEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIM 785
Query: 417 HDEMLKMGHKPDEATYKQVI 436
M K G P +I
Sbjct: 786 FSSMEKTGCAPSSRLLNDII 805
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 179/404 (44%), Gaps = 12/404 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V N ++ + EI A + R VSP+ T++ + + LC SGK +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 102 LGLLDSGI----YSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ +LD + Y V+ Y ++I+ + G A L+EM R TP TY+ +++
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM-RDRGCTPDVVTYNVLVN 282
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + + + + M P ++ +++ + G+ AE + +
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVIT--HNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L ++G + AI I + + G Y ++ CKE + +
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +V RG P + + + + C GK ++ E+L+ + KG +++++
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+ KAI L ++ D TY L+ GL ++G+++EA++ F + + V ++
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAV 520
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ LC ++ +A+ M+ G KP E +Y +I G
Sbjct: 521 TFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGL 564
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 92/435 (21%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---- 106
N L L R E+ MV G P+ + + + CR GK +L+
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL----DGARRY 161
SG V+ YN++I Y K G+ A L+ M +++P TY++IL D +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ EV DR M+++ P D + TY
Sbjct: 222 QAMEVLDR----MLQRDCYP-------DVI---------TYTI----------------- 244
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
+++A ++ V +A+++ + +RG T Y VN +CKE + +E L D+
Sbjct: 245 ----LIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL--------LLDSFCC----- 328
G P + + + S C G+W + E+LL+ +L KG +L +F C
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 329 ----------------------SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ L+ +C +++D+AI ++ D+ TY+ +
Sbjct: 361 GRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L L KDG++E+AV I + + K S ++ V+ L + KA+K DEM
Sbjct: 421 LTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 425 HKPDEATYKQVISGF 439
KPD TY ++ G
Sbjct: 480 LKPDTITYSSLVGGL 494
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 186/431 (43%), Gaps = 34/431 (7%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G +G + M +G VP + C L+ R + R A+ + + G P+ T+
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+++ C++G+ L +LD S V YN ++ G A + L+ M R+
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ-RD 234
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY+ +++ R + +++ M ++ P D V + G
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTP-------DVVTYNVLVNGICKE 287
Query: 204 AEMIFKRACDEKIELQDD--TCGC---------MLKALSKEGRVKEAIQIYHLISERGIT 252
+ DE I+ +D + GC +L+++ GR +A ++ + +G +
Sbjct: 288 GRL------DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N LC++ +L + + G P ++ + + C + K E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ +G D ++++ C + +++ A+ + ++ S + TY+ ++DGL K
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 373 DGRMEEAVRIFDYM--KELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
G+ +A+++ D M K+LK ++ SS V +SR + E A+K E +MG +P+
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE---AIKFFHEFERMGVRPN 518
Query: 429 EATYKQVISGF 439
T+ ++ G
Sbjct: 519 AVTFNSIMLGL 529
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 41/324 (12%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P V N L++ + ++ + A M G PN T +++ + +C +G+
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLT--- 145
+ +++ +L G SV+ +N++I+F +KG G A D L +M C +L+
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 146 ---------------------------PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
P TY+++L + K E + I+ + K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P L + VI L+ GKT A + + ++ T ++ LS+EG+V E
Sbjct: 445 CSP--VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AI+ +H G+ + + + LCK Q + L ++ RG P + +
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562
Query: 299 SQCGKGKWKEVEELLSAVLDKGLL 322
+G KE ELL+ + +KGL+
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLM 586
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 184/413 (44%), Gaps = 12/413 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ ++ G VP V N ++ + EI A + R VSP+ T++ + + L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSL 214
Query: 93 CRSGKFEVVLGLLDSGI----YSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C SGK + + +LD + Y V+ Y ++I+ + G A L+EM R TP
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPD 273
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+ +++G + + + + + + M P ++ +++ + G+ AE +
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT--HNIILRSMCSTGRWMDAEKL 331
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ T ++ L ++G + AI I + + G Y ++ CK
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E + + L +V RG P + + + + C GK ++ E+L+ + KG
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+++++ + KAI L ++ D TY L+ GL ++G+++EA++ F +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ +F ++ LC ++ +A+ M+ G KP+E +Y +I G
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 175/435 (40%), Gaps = 92/435 (21%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---- 106
N L + R E+ MV G P+ + + + CR GK +L+
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL----DGARRY 161
SG V+ YN++I Y K G+ A L+ M +++P TY++IL D +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ EV DR M+++ P D + TY
Sbjct: 222 QAMEVLDR----MLQRDCYP-------DVI---------TYTI----------------- 244
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
+++A ++ V A+++ + +RG T Y VN +CKE + +E L D+
Sbjct: 245 ----LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL--------LLDSFCC----- 328
G P + + + S C G+W + E+LL+ +L KG +L +F C
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 329 ----------------------SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ L+ +C +++D+AI ++ D+ TY+ +
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L L KDG++E+AV I + + K S ++ V+ L + KA+K DEM
Sbjct: 421 LTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 425 HKPDEATYKQVISGF 439
KPD TY ++ G
Sbjct: 480 LKPDTITYSSLVGGL 494
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 186/431 (43%), Gaps = 34/431 (7%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G +G + M +G VP + C L+ R + R A+ + + G P+ T+
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+++ C++G+ L +LD S V YN ++ G A + L+ M R+
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ-RD 234
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY+ +++ R + +++ M ++ P D V + G
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP-------DVVTYNVLVNGICKE 287
Query: 204 AEMIFKRACDEKIELQDD--TCGC---------MLKALSKEGRVKEAIQIYHLISERGIT 252
+ DE I+ +D + GC +L+++ GR +A ++ + +G +
Sbjct: 288 GRL------DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +N LC++ +L + + G P ++ + + C + K E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L ++ +G D ++++ C + +++ A+ + ++ S + TY+ ++DGL K
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 373 DGRMEEAVRIFDYM--KELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
G+ +A+++ D M K+LK ++ SS V +SR + E A+K E +MG +P+
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE---AIKFFHEFERMGIRPN 518
Query: 429 EATYKQVISGF 439
T+ ++ G
Sbjct: 519 AVTFNSIMLGL 529
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 137/327 (41%), Gaps = 41/327 (12%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P V N L++ + ++ + A M G PN T +++ + +C +G+
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLT--- 145
+ +++ +L G SV+ +N++I+F +KG G A D L +M C +L+
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 146 ---------------------------PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
P TY+++L + K E + I+ + K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P L + VI L+ GKT A + + ++ T ++ LS+EG+V E
Sbjct: 445 CSP--VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AI+ +H GI + + + LCK Q + L ++ RG P + +
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDS 325
+G KE ELL+ + +KGL+ S
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKS 589
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 209/472 (44%), Gaps = 51/472 (10%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ALS VL Y+ G +E+Y ++ +Y VP V ACNALL + + + A +Y
Sbjct: 135 EALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYD 194
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG 126
M G + ++ ++ + +C GK E L++ + + V YN +I Y K G
Sbjct: 195 EMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLG 254
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFL 185
D A E+ + P T+ ++++G + SDR++ + E+ L + FL
Sbjct: 255 DIENAKLVFKEL-KLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFL 313
Query: 186 SGNDYVIQKLSDMGKTYAAEMI-FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
N+ + K K AE I + A D K ++ T ++ L KEG+ + A +
Sbjct: 314 --NNIIDAKYRHGFKVDPAESIRWIVANDCKPDIA--TYNILINRLCKEGKKEVAAGLLD 369
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQ-----------------PE-----------EVCG 276
S++G+ + + Y + CK + P+ V G
Sbjct: 370 EASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSG 429
Query: 277 LLRDVV-------ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ D V +RG P A + ++ C G++ + L S +LD+ +L D++ +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYA 489
Query: 330 SLMEYYCSNRQIDKA-IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+L++ + + D+A + +EK +DV ++ ++ G + G ++EA+ + M E
Sbjct: 490 TLIDGFIRSGDFDEARKVFTLSVEK-GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+V ++ ++ +++ A+K +M K KP+ TY +I+GF
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGF 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/446 (17%), Positives = 184/446 (41%), Gaps = 24/446 (5%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ ++D G +D E R + P ++ N L++ L ++ + +A+ L
Sbjct: 313 LNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEAS 372
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEV----VLGLLDSGIYSS-VMYNLVIDFYSKKGDFG 129
+ G+ +++ + Q C+S ++++ +L L + G V Y ++I G
Sbjct: 373 KKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + ++ + R ++P + Y+ ++ G + + + + M+++ +LP ++
Sbjct: 433 DAVNMKVKLID-RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYAT- 490
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A +F + ++ +++ M+K + G + EA+ + ++E
Sbjct: 491 -LIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ Y ++ K+ + RD+ + P + + + C +G +
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLA 609
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYC-SNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EE + + L+ + ++L+ + + ++KA+ + K + T++ LL
Sbjct: 610 EETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 369 GLFK--DGRM---------EEAVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKA 413
G K GR ++ F++ +K S ++ V+ LC ++ A
Sbjct: 670 GFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTA 729
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
D M+K G PD ++ ++ GF
Sbjct: 730 CMLQDRMVKKGFSPDPVSFAAILHGF 755
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 145/351 (41%), Gaps = 50/351 (14%)
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
FD L+ + GF+ S + AR E+ D + L E L LS +V
Sbjct: 84 FDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALS---HV 140
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDD-----TCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ G A I+ D +EL D C +L + K R+++A ++Y +
Sbjct: 141 LHAYAESGFLSKAVEIY----DYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEM 196
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD-------------------------- 280
ERG V + V +C E + EE L+ D
Sbjct: 197 CERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDI 256
Query: 281 ---------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ +G++P + C KG + + LL V ++GL + + +++
Sbjct: 257 ENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNI 316
Query: 332 MEY-YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KEL 389
++ Y ++D A ++ + D+ATY++L++ L K+G+ E A + D K+
Sbjct: 317 IDAKYRHGFKVDPAESIRWIVAN-DCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKG 375
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++++ S+ ++ C KE A K ++ + G KPD TY +I G +
Sbjct: 376 LILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLV 426
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/353 (18%), Positives = 131/353 (37%), Gaps = 32/353 (9%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F+ ++ M +P L+D R + A ++ V GV +
Sbjct: 464 GRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHH 523
Query: 86 SLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + CRSG + L ++ + Y+ +ID Y K+ D A +M
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEK 583
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ P TY+S+++G +++ M + L+P + +I+ +
Sbjct: 584 NK-CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPN--VVTYTTLIRSFAKESS 640
Query: 201 T-----YAAEMIFKRACDEKIELQDDTCGCMLKALSKE--------------GRVKEAIQ 241
T Y E++ C + T C+L+ K+ G+ +
Sbjct: 641 TLEKAVYYWELMMTNKCVP----NEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFE 696
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+H + G + + Y + + LC + C L +V++G+ P + + + C
Sbjct: 697 FFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFC 756
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI-DKAIALHIKIEK 353
G K+ + LD+ L + S ++E + I + + LH +EK
Sbjct: 757 VVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEK 809
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 181/398 (45%), Gaps = 4/398 (1%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P V+ N + L + I A+ L M+ G +PN FT+ ++ LCR GK +
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341
Query: 102 LGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
LL+ + V++N +I+ Y +G A ++E P TY++++ G +
Sbjct: 342 RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ ++ M K P + +I + G+ A + + + L
Sbjct: 402 KGYLVSARELMNEMQIKGCEPN--VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
C++ AL K+ +V++A+ ++ +S +G + + + LCK ++ EE GL +D
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++ G I + + + + +G +E +L++ +L +G LD + L++ C
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVI 399
I+K +AL + + + + ++L++GL + G ++ A+ D + ++
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+++ LC ++A+ D++ G PD TY +IS
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 189/448 (42%), Gaps = 27/448 (6%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMR-VYGFVPAVSACNALLDALYRQNEIR 64
EG + L++ Y GL + MR VY P + N +LD L N +
Sbjct: 140 EGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPK 199
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVI 119
+ ++ M+ G+SP +T+ +V + LC + + LL + ++++Y +I
Sbjct: 200 VVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLI 259
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLT------PGFSTYSSILDGARRYEKTEVSDRIVGL 173
K G R+NE+ P +T++ + G + + + ++V
Sbjct: 260 HALXKVG-------RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 312
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+ + P F G ++ L MGK A M+ + + + L + ++
Sbjct: 313 MLLRGFTPNSFTYG--VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT----LINGYVSR 366
Query: 234 GRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
GR+ EA + H + G Y + LCK+ L+ ++ +G P +
Sbjct: 367 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 426
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C +G+ +E +L + KGL L++ + L+ C + ++ A+ + +
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELR 411
D+ T++ L+ GL K + EEA+ ++ D + E + ++ ++ ++ ++
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 546
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A+K ++ML G D+ TY +I
Sbjct: 547 EALKLVNDMLFRGCPLDDITYNGLIKAL 574
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 152/341 (44%), Gaps = 9/341 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLA-SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P V N L++ + + A + ++ +M+ G P+ FT++ + LC+ G
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410
Query: 104 LLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L++ G +V+ Y ++ID + K+G A + L+EM +G+ L Y+ ++
Sbjct: 411 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM-SGKGLALNAVGYNCLISAL 469
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ EK + + + G M K P F + +I L + K A +++ E +
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTF--NSLIFGLCKVNKFEEALGLYQDMLLEGVIA 527
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ A + G ++EA+++ + + RG + D Y + LC+ E+ L
Sbjct: 528 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 587
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
D++ +G P + + + C G + E L ++ +GL D +SL+ C
Sbjct: 588 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 647
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ +A+ L K++ D TY+ L+ K+G ++A
Sbjct: 648 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 688
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 129/326 (39%), Gaps = 46/326 (14%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I+ CE ++++D + +G + V M G N L+ AL +
Sbjct: 417 IKGCE---PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG-----LLDSGIYSSVMYN 116
+++ A ++G M G P+ FT++ + LC+ KFE LG LL+ I +++ YN
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+I + ++G A +N+M R TY+ ++ R E + M+
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDML-FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
K L P + +C ++ L + G +
Sbjct: 593 KGLNPNNI-------------------------------------SCNILINGLCRTGNI 615
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ A++ + RG+T Y + +N LCK + +E L + G P A+ +
Sbjct: 616 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 675
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLL 322
++ C +G + + LLS +D G +
Sbjct: 676 ISWHCKEGMFDDAHLLLSRGVDSGFI 701
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + +++++ G LE R M G P + N+L++ L + +
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVID 120
A L+ + +G+ P+ T++ + C+ G F+ LL G+ S + N +++
Sbjct: 653 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712
Query: 121 FYSKKGD 127
+ K+GD
Sbjct: 713 NFIKEGD 719
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 177/413 (42%), Gaps = 13/413 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F L+++ M +G + N ++ L +I A L+ M++ G P T+
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446
Query: 86 SLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + G LLD +G YN ++ +SK G +A EM
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
L P +Y++++DG + K +++ ++ M E P + + VI LS +
Sbjct: 507 C-GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN--VESYNAVINGLSKENR 563
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
AE I + ++ + T ++ L + GR + A +I+H + +R Y +
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ LC+E + +E + E G P S V+ C KG++ E E+L+ + ++G
Sbjct: 624 LIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D SL+ +C N ++D A+ + IE L ++ Y L+ L K G++EEA
Sbjct: 680 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 739
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+FD M E + + + ++V L EL MK M P+ TY
Sbjct: 740 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 179/412 (43%), Gaps = 9/412 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M G P++ N L++ L ++ ++R A + + + +SP+ FT++ + C
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244
Query: 94 RSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R+ ++ G+ D + +SV Y+ +I+ +G A D L EM + + P
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE-KGIEPTV 303
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+ + E E + +V M ++ P + +I LS +GK A ++
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPN--VQTYTALISGLSRLGKLEVAIGLY 361
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ E + T ++ L GR A++I+H + G Y + LC
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
E+ L +++ G +P + + + KG LL + + G D +
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ + +++ A ++ + + + +Y L+DG KDG+++ A+ + M+E
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Query: 389 LKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + S+ V++ L +A K D+M++ G P+ TY +I G
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 180/444 (40%), Gaps = 48/444 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G P V AL+ L R ++ +A LY M+++G+ PN T++ + LC G+
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 98 FEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
F L + + ++ YN +I GD A +M L P TY+
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYN 447
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + R++ LM E P + + ++ S GK +A F+
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY--NELVSGFSKWGKLESASFYFQEMV 505
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + + ++ SK+G+V A+ + + E G Y A +N L KE++
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + +VE+G +P + + + C G+ + ++ + + L + + SSL+
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE---- 388
C + D+A ++ ++ + TY L+ GL + GR EA ++ MKE
Sbjct: 626 YGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 681
Query: 389 ----------------------LKVVSS----------SSFVIVVSRLCHLKELRKAMKN 416
LK+ S S + ++ LC ++ +A
Sbjct: 682 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 741
Query: 417 HDEMLKMGHKPDEATYKQVISGFM 440
D ML+ DE + ++ G +
Sbjct: 742 FDNMLEKEWNADEIVWTVLVDGLL 765
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 178/397 (44%), Gaps = 33/397 (8%)
Query: 25 KGLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL + G + ++ M G +P V N L++ + + A+ L M +G
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475
Query: 80 PNKFTWSLVAQILCRSGKFEVV----LGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFD- 133
P+++T++ + + GK E +++ G+ + V Y +ID +SK G A
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Query: 134 --RLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
R+ EM CN P +Y+++++G + + +++I MVE+ LLP +
Sbjct: 536 LKRMEEMGCN-----PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN--VITYTT 588
Query: 191 VIQKLSDMGKTYAAEMIF----KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I L G+T A IF KR C + T ++ L +EG+ EA ++
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY----TYSSLIYGLCQEGKADEAERM---- 640
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
SE G Y V+ LC++ + E L++D+ ERG+ P + + C +
Sbjct: 641 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV 700
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
++ ++ KG L +L+ C Q+++A AL + + + + D + VL
Sbjct: 701 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 760
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR 403
+DGL K+G ++ +++ M+ + +++ R
Sbjct: 761 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGR 797
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 185/432 (42%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +++ S KG + + + Y P V +L+ R + LA ++ M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDF 128
V++G PN T+S + LC G+ + L +L+ GI +V Y L I
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + M R P TY++++ G R K EV+ + M+++ L+P
Sbjct: 320 EEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY-- 376
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I +L G+ A IF T ++K L G +++A+ ++ + +
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y +N + LL + E G P + V+ GK +
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ GL + ++L++ + + ++D A++L ++E++ + +V +Y+ +++
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K+ R EA +I D M E ++ + ++ ++ LC + A K +M K P
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 428 DEATYKQVISGF 439
+ TY +I G
Sbjct: 617 NLYTYSSLIYGL 628
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 185/414 (44%), Gaps = 19/414 (4%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA--QILC 93
R++R F PA ++ A + EIR A + +S F +SL + +L
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRV-----ADFLNEISGMGFGFSLYSCNTLLI 171
Query: 94 RSGKFEVVLG-------LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ KFE+V G +L+SGI S++ +N +I+ SKKG A L+++ +L+
Sbjct: 172 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-YDLS 230
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+S++ G R +++ + MV++ P +I L + G+ A
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST--LINGLCNEGRVDEAL 288
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + ++ IE T + AL +EAI++ + +RG Y A ++ L
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + E GL +++ G +P + + + C G++ ++ + G L ++
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ +++ C I+KA+ L K+ K+ V TY+ L++G G + A R+ D
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
MKE ++ +VS +L A EM++ G P+ +Y +I G
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 144/311 (46%), Gaps = 8/311 (2%)
Query: 133 DRLNEMCNGRNLTPGFSTYS--SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
D LNE+ + GFS YS ++L ++E E + + M+ + P L+ N
Sbjct: 149 DFLNEI---SGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS-LLTFNT- 203
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I LS GK AE+I + + T ++ + + A ++ + + G
Sbjct: 204 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y +N LC E + +E +L +++E+G P + + + C +E
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL++ + +G + ++L+ +++ AI L+ K+ K + TY+ L++ L
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383
Query: 371 FKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
GR A++IF +M+ + ++ ++ ++ LC ++ KAM ++MLKMG P
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443
Query: 430 ATYKQVISGFM 440
TY +I+G++
Sbjct: 444 VTYNTLINGYL 454
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 174/401 (43%), Gaps = 9/401 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P V + + +++ + + ++ L+ M+ G+ P+ T++ V LC++ F+ G
Sbjct: 197 PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256
Query: 104 ---LLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
++D+G ++ YN +I Y G + L EM + R L P TY S+L+
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM-SARGLKPDCYTYGSLLNYLC 315
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + M+ K + PK +S +I + G + +
Sbjct: 316 KNGRCREARFFFDSMIRKGIKPK--VSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD 373
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
A +K G + +A+ I++ + + G++ +Y A ++ LCK + ++
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ G P + + V C KW+ EEL+ +LD+G+ ++ ++L+ C+
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++ + L +E + D +Y L+ G GR +EA ++FD M + + + ++
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C + A EML+ G P TY ++ G
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 179/430 (41%), Gaps = 9/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V++ + +G ++ M G P V ++D L + A ++ M+
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
+G PN +T++ + GK++ V+ +L+ G+ Y ++++ K G
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE 322
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M + + P STY ++ G + LMVE L P H + +
Sbjct: 323 ARFFFDSMIR-KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF--NI 379
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ G A IF + + G ++ AL K GRV +A ++ + G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T + + V LC + E L+ +++++G P A+ + + + C G+ E
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L+ + G+ D+F + L+ YC + D+A + + + S TY+ LL G
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 559
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
R+++A +F M V ++ ++ L K +A + + M+ G K D
Sbjct: 560 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDI 619
Query: 430 ATYKQVISGF 439
TY +++G
Sbjct: 620 YTYNIILNGL 629
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 172/431 (39%), Gaps = 48/431 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA-SCLYGAMV 74
S+++ + G G + ++ G+ A N LL L + A L M
Sbjct: 94 SILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMP 153
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSG---IYSSVMYNLVIDFYSKKG 126
G P+ +++++ + LC + E L LL D G + V Y++VI+ + +G
Sbjct: 154 ELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEG 213
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
++ EM + R + P TY++++DG K ++ DR
Sbjct: 214 QVDKPYNLFLEMID-RGIPPDVVTYTTVIDG---LCKAQLFDR----------------- 252
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
AE +F++ D + + T C++ G+ KE +Q+ +
Sbjct: 253 -----------------AEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
S RG+ Y + +N LCK + E ++ +G P + KG
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E+ L +++ GL D + Y IDKA+ + K+ + S +V Y L
Sbjct: 356 SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 415
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+D L K GR+++A F+ M V + F +V LC + + +A + EML G
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475
Query: 426 KPDEATYKQVI 436
P+ + +I
Sbjct: 476 CPNAVFFNTLI 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/405 (18%), Positives = 172/405 (42%), Gaps = 17/405 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P VS L+ + + MV +G+SP+ +++ + G +
Sbjct: 334 GIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 393
Query: 102 LGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ + + G+ +V+ Y +ID K G A + N+M N +TP ++S++
Sbjct: 394 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN-EGVTPNIVVFNSLVY 452
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD--E 214
G +K E ++ +V M+++ + P + +I L ++G+ M +R D E
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFF--NTLICNLCNVGRV----MEGRRLIDLME 506
Query: 215 KIELQDDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ ++ D ++ GR EA +++ + G++ + Y ++ C + +
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ L R+++ +G P + + + ++ E +EL +++ G D + + ++
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 626
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C + +D+A + + L++ T+ +++ L K GR E+A+ +F + +V
Sbjct: 627 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 686
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ +V L L + M K G P+ ++
Sbjct: 687 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 731
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC-GKGKWKEVEELLSAV 316
Y + C+ E +++ G+ + +++ + C GK + ++ LL +
Sbjct: 93 YSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRM 152
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG---SLDVATYDVLLDGLFKD 373
+ G + D+ + L++ C+ ++ ++A+ L + G +V +Y ++++G F +
Sbjct: 153 PELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTE 212
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G++++ +F M + + ++ V+ LC + +A +M+ G KP+ TY
Sbjct: 213 GQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTY 272
Query: 433 KQVISGFM 440
+I G++
Sbjct: 273 NCLIHGYL 280
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 181/436 (41%), Gaps = 40/436 (9%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A S V+ YS G D L+V +M+ G P + CN +D R N + A
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG 126
M G+ PN T++ + + C + E + LL+ + V Y ++ + K+
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS--------------DRI-- 170
D + +M L P TY++++ +++ + + D++
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 171 ---------VGLMVEKKLLPKHFLSGND---------YVIQKLSDMGKTYAAEMIFKRAC 212
G M E K L LS V+ +G+ A+ + +
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + +L + + G+ EA ++ ++ E + Y ++ L +E +
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 541
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E C ++R++V +G+ P +E++ + S C G+ E + + L+KG ++ ++++
Sbjct: 542 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV- 391
+C N ++D A+++ + + DV TY L+D L K GR+ EA + M +
Sbjct: 602 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGID 661
Query: 392 VSSSSFVIVVSRLCHL 407
+ ++ V+ R C +
Sbjct: 662 PTPVTYRTVIHRYCQM 677
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 173/427 (40%), Gaps = 11/427 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ S L V +M+ G A + ++ + R ++R A + M R G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
V PN + + R+ + E L L+ GI +V+ YN +I Y A
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L +M + L S Y+ + + EV D + + E L+P + +I
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTY--NTLI 390
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L+ A K A ++ + ++ AL KEGR+ EA + + + +G
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHC 450
Query: 253 VRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
D Y A VN C+ + ++ LL+ + G+ P + + + C GK E E
Sbjct: 451 PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD-VATYDVLLDGL 370
+++ + +S S +M ++ +A + ++ LKG ++LL L
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV-VREMVLKGFFPGPVEINLLLQSL 569
Query: 371 FKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+DGR EA + + + + ++ +F V+ C EL A+ D+M + D
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 629
Query: 430 ATYKQVI 436
TY ++
Sbjct: 630 FTYTTLV 636
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C + + R+++A++ + GI Y + C H+ EE LL D+
Sbjct: 280 CNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMH 339
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQI 341
+G +P + + C + + EV +L+ + + GL+ D ++L+ +
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 342 DKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFV 398
D+A+ +K + KG +D Y ++ L K+GRM EA + + M K ++
Sbjct: 400 DEALWF-LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV+ C L E+ KA K M GHKP+ +Y +++G
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVV----ERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
YY+ + VL K ++C R V+ RG SR + S G+ ++ ++L
Sbjct: 210 YYSMLEVLSKT----KLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + G+ + C++ ++ + +++KA+ +++ + +V TY+ ++ G
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK---ELRKAMKNHDEMLKMGHKPDE 429
R+EEA+ + + M + S+ ++ LC K E+R MK + + G PD+
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK--EHGLVPDQ 383
Query: 430 ATYKQVI 436
TY +I
Sbjct: 384 VTYNTLI 390
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 155/328 (47%), Gaps = 4/328 (1%)
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
V Y +V++ K+GD AF+ LN+M G+ L PG Y++I+DG +Y+ + + +
Sbjct: 17 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFK 75
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M K + P + +I L + G+ A + + KI T ++ A K
Sbjct: 76 EMETKGIRPNVVTYSS--LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
EG++ EA ++Y + +R I Y + +N C + +E + +V + P +
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C + +E E+ + +GL+ ++ + L++ D A + ++
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELR 411
++ TY+ LLDGL K+G++E+A+ +F+Y++ K+ + ++ I++ +C ++
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ G KPD Y +ISGF
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGF 341
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 161/374 (43%), Gaps = 17/374 (4%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSK 124
MV G P+ T+ +V LC+ G ++ LL+ G+ ++YN +ID K
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV---LIYNTIIDGLCK 63
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A + EM + + P TYSS++ Y + + R++ M+E+K+ P F
Sbjct: 64 YKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+I GK AE ++ I+ T ++ R+ EA Q++
Sbjct: 123 TFS--ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ + Y + CK + EE + R++ +RG + + + + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+E+ ++ G+ + ++L++ C N +++KA+ + +++ K + TY+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLK 422
++++G+ K G++E+ +F + LK V ++ ++S C +A EM +
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359
Query: 423 MGHKPDEATYKQVI 436
G P+ Y +I
Sbjct: 360 DGTLPNSGCYNTLI 373
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 155/374 (41%), Gaps = 8/374 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D L + + A L+ M G+ PN T+S + LC G++ L
Sbjct: 49 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 108
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L I + ++ +ID + K+G A +EM R++ P TYSS+++G
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK-RSIDPSIVTYSSLINGFC 167
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+++ + + ++ MV K P + + +I+ + +F+ +
Sbjct: 168 MHDRLDEAKQMFEFMVSKHCFPD--VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 225
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +++ L + G A +I+ + G+ Y ++ LCK + E+ +
Sbjct: 226 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ P + + C GK ++ +L + KG+ D ++++ +C
Sbjct: 286 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 345
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
++A AL ++++ + Y+ L+ +DG E + + M+ +S +
Sbjct: 346 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 405
Query: 400 VVSRLCHLKELRKA 413
+V+ + H L K+
Sbjct: 406 LVTNMLHDGRLDKS 419
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 153/356 (42%), Gaps = 11/356 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L +++ M G P V ++L+ L AS L M+ ++P+ FT+S +
Sbjct: 69 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 128
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN------GRN 143
+ GK L D + S+ ++V YS + DRL+E ++
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVT--YSSLINGFCMHDRLDEAKQMFEFMVSKH 186
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY++++ G +Y++ E + M ++ L+ + +IQ L G
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY--NILIQGLFQAGDCDM 244
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A+ IFK + + T +L L K G++++A+ ++ + + Y +
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+CK + E+ L ++ +G P + + ++ C KG +E + L + + G L
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 364
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+S C ++L+ + + + L ++ + D +T L+ + DGR++++
Sbjct: 365 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 419
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L+ +V +G P + V C +G LL+ + L +++++
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + +D A+ L ++E +V TY L+ L GR +A R+ M E K+
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F ++ +L +A K +DEM+K P TY +I+GF
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+ ++ KG D ++ C D A L K+E+ K V Y+ ++DGL
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 372 KDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K M++A+ +F M+ VV+ SS ++S LC+ A + +M++ P
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSS---LISCLCNYGRWSDASRLLSDMIERKINP 119
Query: 428 DEATYKQVISGFM 440
D T+ +I F+
Sbjct: 120 DVFTFSALIDAFV 132
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 206/500 (41%), Gaps = 82/500 (16%)
Query: 11 QSDALSLVLD----CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
S L LVLD Y G+F + ++ + GFVP + +CN L++ L +I +A
Sbjct: 152 HSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMA 211
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI-DFY--- 122
+Y + R G++PN +T+ + + LCR G FE + + + V N V Y
Sbjct: 212 VAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEG 271
Query: 123 ---SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
K+ D G ++ L + N Y++++ G K + ++ + MV + +
Sbjct: 272 LCSHKRSDLG--YEALRAL-RAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGI 328
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAA-----EMI-----------FKRACDEKIELQDDTC 223
P ++ G +I G A +M+ FK D I L +
Sbjct: 329 APDGYIYGA--LIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLY 386
Query: 224 GCMLKALSKEGRVKEAIQI-----------------------------------YHLISE 248
++ AL K G+V+EA+++ + + E
Sbjct: 387 NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 446
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI Y V + +E LL + +G P + +R + C GK KE
Sbjct: 447 RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKE 506
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV--- 365
E L+ + DK L+++ S++++ YC KA L ++ K +G L + DV
Sbjct: 507 AEAFLNTLEDK--CLENY--SAMVDGYCKANFTRKAYELFSRLSK-QGILRMLALDVEPN 561
Query: 366 ------LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
L+ +DG M+ A +FD + E + ++ ++++ C + LR+A +
Sbjct: 562 QIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFN 621
Query: 419 EMLKMGHKPDEATYKQVISG 438
+M + G KPD TY V+ G
Sbjct: 622 DMKERGIKPDVITYTVVLDG 641
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 177/401 (44%), Gaps = 32/401 (7%)
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI 119
+NE LA + + G N T++ + ++LCR + E L L S I S V+
Sbjct: 74 KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCR-WRLERKLQSLLSEIVGS--KESVL 130
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKK 178
F D A FD L E S +LD + Y + + D + + + K
Sbjct: 131 GF-----DITALFDVLREGGGEVEGEHS-SVLILVLDMLVKAYVRVGMFDEAIDALFQTK 184
Query: 179 ---LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+P H +S N +++ +L + GK A I++ + D T G +KAL ++G
Sbjct: 185 RRGFVP-HIMSCN-FLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+EA+ ++ + E G+ ++ LC + + LR + + +
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI------ 349
+ C + K KE E++ ++++G+ D + +L+ YC + +A+ALH
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
Query: 350 -------KIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFV 398
+ ++ + S LD Y++++D L K G++EEAV + + MK ++ + +
Sbjct: 363 IKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYT 422
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C +L A +EM + G +PD TY ++ GF
Sbjct: 423 TLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGF 463
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 176/438 (40%), Gaps = 72/438 (16%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G E R +R + A A++ + +++ A ++ MV +G++P+ + + +
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340
Query: 91 ILCRSGKFEVVLGL--------------------LDSGIY-SSVMYNLVIDFYSKKGDFG 129
C++G + L DSGI+ V+YN+V+D K G
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + LNEM GR ++ Y++++ G
Sbjct: 401 EAVELLNEM-KGRRMSLDVVHYTTLIAG-------------------------------- 427
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
Y +Q GK A+ +F+ + IE T ++ S+ G KEA+++ I +
Sbjct: 428 YCLQ-----GKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQ 482
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + + + LC + +E L + ++ C S V C ++
Sbjct: 483 GLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKA 538
Query: 310 EELLSAVLDKGLL--------LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
EL S + +G+L + L+ +C + + +A + + + + DV
Sbjct: 539 YELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVI 598
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY ++++G + + EA IF+ MKE + ++ +V+ L+ A+ +DEM
Sbjct: 599 TYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEM 658
Query: 421 LKMGHKPDEATYKQVISG 438
+ G +PD TY ++ G
Sbjct: 659 IARGLQPDIVTYTALLPG 676
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 129/335 (38%), Gaps = 43/335 (12%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ +GR D + + ++ Y +G +D ++ M+ G P + N L+
Sbjct: 405 LLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFS 464
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSSVMY 115
R + A L + G+ PN T + + + LC +GK E L L+ + Y
Sbjct: 465 RNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN--Y 522
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
+ ++D Y K A F R + +S R K + R++ L V
Sbjct: 523 SAMVDGYCK-----ANFTR-----------KAYELFS-------RLSKQGIL-RMLALDV 558
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E P + G +I G A+++F + I T M+ +
Sbjct: 559 E----PNQIMYGK--LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNC 612
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++EA I++ + ERGI Y ++ K + ++ L +++ RG P + +
Sbjct: 613 LREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTA 672
Query: 296 FVASQCGKG------KWKEVEELLSAVLDKGLLLD 324
+ +C G +W E +L +G+ L+
Sbjct: 673 LLPGKCNFGSRHFDNQWLEEPKLFILAQPRGVRLE 707
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 186/432 (43%), Gaps = 23/432 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS++++CY H G V+ + G ALL + +
Sbjct: 104 TLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALL--------------FHDHV 149
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
+ G N T+ ++ LC+ G+ L +L + + ++ VMY+ +ID K
Sbjct: 150 LALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLV 209
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM R + P T+SS++ G K + + R+ MV K + P +
Sbjct: 210 TDAYGLYSEMIVKR-IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTF-- 266
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L GK A+ + E +E T ++ V +A + +IS
Sbjct: 267 NILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISR 326
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ Y +N CK +E L ++ RG P + + + C G+
Sbjct: 327 MRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPY 386
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EL+ + + + D +SL++ +C N+ +DKAIAL KI++ ++ TY++L+D
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILID 446
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K G+++ A +F D + + V++ ++ I+++ LC +A +M G P
Sbjct: 447 GLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIP 506
Query: 428 DEATYKQVISGF 439
D TY+ +I
Sbjct: 507 DAVTYETIIQAL 518
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 140/341 (41%), Gaps = 8/341 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
+ ++D L + + A LY M+ + P T+S + C GKF+ L + +
Sbjct: 197 STIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVM 256
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
++ +N+++D K+G A + + M + P TY++++DG +
Sbjct: 257 KNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMK-EGVEPTVVTYNTLMDGYCLVNEVG 315
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ ++ ++ ++ P + +I + A +F C I T
Sbjct: 316 KAKHVLSIISRMRVAPNS--RSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L K GR+ A ++ + I Y + ++V CK ++ L++ + E G
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C G+ K +++ +L KG ++++ + ++ C D+A
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAE 493
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L K+E D TY+ ++ LF E+A ++ M
Sbjct: 494 VLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 192/474 (40%), Gaps = 44/474 (9%)
Query: 2 IQSCEGR----DSQSDALSLVLDCYSHKGLFMDGLEV-YRMMRVYGFVPAVSACNALLDA 56
I C R S ++ L VL + G +D + + MR P++ N +L
Sbjct: 18 INKCNRRRSPMPSSAEPLKTVLSIPN--GFVVDNAVLSFNRMRQIRQTPSIVEFNKILTY 75
Query: 57 LYR-QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI-- 109
L + +N L M GV P+ FT S++ C G+ F V +L G+
Sbjct: 76 LIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCL 135
Query: 110 --------------------YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ V Y ++I+ K G AA L ++ G+ +
Sbjct: 136 NGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQI-EGKLVNTNVV 194
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
YS+I+DG + + + + M+ K++ P + +I +GK A +F
Sbjct: 195 MYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPT--VVTFSSLIYGFCIVGKFKDAFRLFN 252
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ I T ++ AL KEG++KEA + ++ + G+ Y ++ C +
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD---KGLLLDSF 326
+ + +L + P + + + C K K V+E L + +G+
Sbjct: 313 EVGKAKHVLSIISRMRVAPNSRSYNIMINGFC---KIKMVDEALCLFHEMCCRGIAPHKV 369
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+SL++ C +I A L ++ D+ TY+ L+D K+ +++A+ + +
Sbjct: 370 TYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI 429
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
KE + + ++ I++ LC +L+ A ++L G+ + TY +I+G
Sbjct: 430 KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGL 483
>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 653
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 199/452 (44%), Gaps = 48/452 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V R +R+ GF + A N L+ L + E +Y M+ G S N T++L+ L
Sbjct: 165 DVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYAL 224
Query: 93 CRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKG--DFGAAFDRLNEMCNGRNLT 145
C K VV +L I+ +V+ +N++ID +K G D R E+ +G +++
Sbjct: 225 CNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVS 284
Query: 146 P----------GF-------------------------STYSSILDGARRYEKTEVSDRI 170
P GF TY++++DG R +V+ R+
Sbjct: 285 PNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRL 344
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
MVE +L+P F+ + +I L G+ A + + +I + T + K L
Sbjct: 345 CDEMVEMRLIPDTFVYNS--LIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402
Query: 231 SKEGRVKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
G + +A+++++ I ER + VRD+ Y +N + + LL ++ G P
Sbjct: 403 CVSGHLNKALRVHYYIVERSL-VRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPD 461
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ V C +GK + ++ + + +S+++ C I A L
Sbjct: 462 MVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVD 521
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLK 408
K+++ G LD TY+ LL G +G +E+A +F M + +V+ S+ I++ LC +
Sbjct: 522 KLQQ-NGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMG 580
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+++AM+ M G PD TY +I+ F+
Sbjct: 581 LIQQAMELMRAMSSQGIIPDLITYTTLITNFV 612
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 155/355 (43%), Gaps = 8/355 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
++ M++ G + CN LL+ R +++ LA G M++ G P+ T+ + C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 94 RSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R + L + D + + V+YN +ID K A D LN M + P
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDV 221
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ G + + R+V M ++++ P F + +I G+ AE +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF--NALIDACVKEGRVSEAEEFY 279
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ ++ T ++ L R+ EA +++ + +G Y +N CK
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ E L ++ +RG + + + + C GK EE+ ++ G+ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ L+ C N +I+KA+ + ++K D+ TY++++ G+ K G + +A I+
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 165/414 (39%), Gaps = 42/414 (10%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L+++ M +P+++ + LL A+ + + + L+ M G+ N T +++
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
CR + + L L I K G P
Sbjct: 124 NCFCRCSQLSLALSFLGKMI--------------KLGH-----------------EPSIV 152
Query: 150 TYSSILDGA----RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
T+ S+L+G R Y+ + D++VG+ + ++ + +I L + A
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY------NTIIDGLCKSKQVDNAL 206
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ R + I T ++ L GR +A ++ +++R I + A ++
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
KE + E +++ R P + S + C + E EE+ ++ KG D
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
S L+ YC +++++ + L ++ + + TY +L+ G + G++ A IF
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M V + ++ +++ LC ++ KA+ +M K G D TY +I G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G +L + RV +A+ ++ + G Y ++ LCK Q + LL +
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G P + + ++ C G+W + ++S + + + D F ++L++ ++
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
+A + ++ + D+ TY +L+ GL R++EA +F +M ++ I+
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C K++ MK EM + G + TY +I G+
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 192/440 (43%), Gaps = 22/440 (5%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
D V+ Y+ + L+++ RM ++G P + + N+LL+AL N+ A +
Sbjct: 79 DVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFL 138
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKG 126
G+SPN T++++ +I CR +F E++ + + G V Y +I+ +K G
Sbjct: 139 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNG 198
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR----YEKTEVSDRIVGLMVEKKLLPK 182
A +EM R +TP + Y+ ++DG + +E+ +R++ +P
Sbjct: 199 YMSDALKLFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAI 240
+ + +I L GK + I+ R +K E D T ++ L G + A
Sbjct: 258 Y-----NVMINGLCKCGKFDESFEIWHRM--KKNERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++Y ++E G++ Y +N + + EE C L V+E+ + + +
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
K E + + +K DS L+ C N ++KA+++ + E +G LD
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDE 419
Y +++GL ++GR++E + D M + + V++ +L A++
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G P TY +I+G
Sbjct: 490 MVSKGCFPTVVTYNTLINGL 509
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 192/450 (42%), Gaps = 52/450 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-D 76
+++ + G D L+++ M G P V+ N L+D +++ +I AS ++ +++
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKG 126
V PN +++++ LC+ GKF+ + D YS++++ L G
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC-----GSG 304
Query: 127 DFGAAFDRLNEMC-NGRNLTPGFSTYSSILDG---ARRYE--------------KTEVSD 168
+ A EM NG ++P Y+++L+G A R E +T VS
Sbjct: 305 NLDGATRVYKEMAENG--VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362
Query: 169 RIV--GLMVEKK---------LLPKHFLSGNDY----VIQKLSDMGKTYAAEMIFKRACD 213
I+ GL K LLP+ + ++ L G A I + A +
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ +L M+ L +EGR+ E + +++ G A +N + + E+
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
++V +G P + + + ++ E L+ +L KG + S LM
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C +++D A+ L + + DV +++++ GL G++E+A++++ MK+ K V
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ + ++ +++ +A K D +L+
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 3/253 (1%)
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE- 248
+++++L D I + +K + +D ++KA +K +A+ I+ + E
Sbjct: 48 HILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEI 107
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y + +N L + ++ +E G P + + C K ++ +
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 167
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ELL+ + ++G D F +L+ N + A+ L ++ + + DVA Y++L+D
Sbjct: 168 AKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 227
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G FK G + A I++ + + V + S+ ++++ LC + ++ + M K
Sbjct: 228 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 287
Query: 427 PDEATYKQVISGF 439
D TY +I G
Sbjct: 288 QDLYTYSTLIHGL 300
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L AL + + EA + G++ Y + + C++ Q ++ LL + E+G
Sbjct: 120 LLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + S G + +L + ++G+ D C + L++ + I A
Sbjct: 180 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNAS 239
Query: 346 ALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
+ ++ LKG ++ +Y+V+++GL K G+ +E+ I+ MK+ + ++ ++
Sbjct: 240 EIWERL--LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLI 297
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC L A + + EM + G PD Y +++G++
Sbjct: 298 HGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 177/399 (44%), Gaps = 10/399 (2%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
V+ CN +L++L Q ++ A + M ++ PN T++ + + G+ + L +LD
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILD 288
Query: 107 ----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+GI + + YN++ID K A+ L M NLTP +Y++++ G
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGE 347
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
K ++ I M+ + L P ++ +I G+T A + + +
Sbjct: 348 GKINLAIYIFNQMLRQSLKPS--VATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSEL 405
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L K ++ A+ + + R I++ + Y ++ C+ + + +L+ +
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G P + S + C G E +E+LS + G+L ++ ++L+ Y+C
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHA 525
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIV 400
+A+ + I + + ++ LL +++G + EA + YM +K+ +SF +
Sbjct: 526 KEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCI 585
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ C + +A +D M++ G PD TY ++ G
Sbjct: 586 IDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 624
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 176/427 (41%), Gaps = 15/427 (3%)
Query: 26 GLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
G F +G + ++ M P+V+ AL+D R A + M GV P
Sbjct: 343 GFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
++ T+S + C+ K L L+ S + MY ++ID + + G+ A L
Sbjct: 403 SELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQIL 462
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
M + P TYS++++G + + I+ M + +LP + L ++
Sbjct: 463 KCML-ADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT--LVFYF 519
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G A F + +L + +EG + EA Q +S I+
Sbjct: 520 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDV 579
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ + ++ C+ E + ++V G+ P + C G + +E +
Sbjct: 580 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 639
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+L+K +D ++L+ C + +D+A+ L K+ D TY +LLDG K G+
Sbjct: 640 LLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 699
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML-KMGHKPDEATYK 433
+ A+ + M E +V + ++ +++ L + +++ A E++ K G D Y
Sbjct: 700 VVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 759
Query: 434 QVISGFM 440
+++G++
Sbjct: 760 SMMNGYL 766
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 180/417 (43%), Gaps = 28/417 (6%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVL 102
V++ N ++D+ ++ + A +Y MVR G P+ T+ + + LC+ G E ++
Sbjct: 579 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 638
Query: 103 GLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
LL+ I + L++ K G A D +M RN+ P TY+ +LDG +
Sbjct: 639 YLLEKACAIDEKTLNTLLVGI-CKHGTLDEALDLCEKMVT-RNILPDTYTYTILLDGFCK 696
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA-CDEKIELQ 219
K + ++ +M+EK L+P ++ L + G+ AA +F+ C E +
Sbjct: 697 RGKVVPALILLQMMLEKGLVPDTI--AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
M+ K G++ E ++ + E + + Y ++ K+ Q L R
Sbjct: 755 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 814
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D+V+ G P + + C G + + L ++ +G+ D+ L++ +
Sbjct: 815 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 874
Query: 340 QIDKAIALH------------IKIEKLKGSLDVATYDV----LLDGLFKDGRMEEAVRIF 383
++ A+ L ++++ +L V +V ++ GL K G++EEA+ +F
Sbjct: 875 KMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVF 934
Query: 384 D-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M+ V + ++F ++ LC ++ A M G K D TY +I+G
Sbjct: 935 SSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 991
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/431 (18%), Positives = 186/431 (43%), Gaps = 10/431 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + G ++ + M G P V +AL++ + + I + M +
Sbjct: 443 TILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 502
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGA 130
GV PN ++ + C++G + + + SG + +SV++N ++ + ++G
Sbjct: 503 SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAE 562
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++ + + ++ ++++ I+D + + + MV P G+
Sbjct: 563 A-EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS-- 619
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ L G A+ ++ + + T +L + K G + EA+ + + R
Sbjct: 620 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 679
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y ++ CK + LL+ ++E+G +P + + + +G+ K
Sbjct: 680 ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 739
Query: 311 ELLSAVLDK-GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ ++ K GL D +S+M Y QI++ L + + + A+Y++L+ G
Sbjct: 740 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 799
Query: 370 LFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K G++ + ++ D +KE + ++ +++ LC + A+K ++M+ G PD
Sbjct: 800 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 859
Query: 429 EATYKQVISGF 439
+ +I F
Sbjct: 860 NLAFDILIKAF 870
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 165/393 (41%), Gaps = 63/393 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV- 74
+++LD + +G + L + +MM G VP A LL+ L + +++ AS ++ ++
Sbjct: 688 TILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIIC 747
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDFG 129
++G+ + ++ + + G+ + L+ ++ +Y SS YN+++ Y KKG
Sbjct: 748 KEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLS 807
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+M + P TY ++ G Y E++ + + MV + + P +
Sbjct: 808 RTLYLYRDMVK-EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNL----- 861
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
A D ++KA S++ ++ A+Q++
Sbjct: 862 ---------------------AFD-----------ILIKAFSEKSKMSNALQLF------ 883
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
Y +V + + +E D+ G +P + S V C GK +E
Sbjct: 884 -------SYMKWVGDIDGAFELKE------DMKALGVVPSEVAESSIVRGLCKCGKVEEA 930
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ S+++ G++ ++LM C +ID A L +E +DV TY+VL+ G
Sbjct: 931 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 990
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVS 402
L + +A+ +++ MK ++ + + I ++
Sbjct: 991 LCNKKCICDALDLYEEMKSKGLLPNITTYITLT 1023
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 39/286 (13%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS------------------- 231
++ L + K+ + K + D K L TC +L +L
Sbjct: 201 ILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR 260
Query: 232 ---------------KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
K+GR K A++I + + GI Y ++ LCK +
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL+ + E P + + G+GK + + +L + L ++L++ YC
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380
Query: 337 SNRQIDKA--IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VS 393
N + D+A + ++I ++ S TY LL+G K ++ A+ + Y++ + ++
Sbjct: 381 RNGRTDEARRVLYEMQITGVRPS--ELTYSALLNGYCKHSKLGPALDLIKYLRSRSISIN 438
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + I++ C L E+ KA + ML G PD TY +I+G
Sbjct: 439 RTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGM 484
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 132/320 (41%), Gaps = 36/320 (11%)
Query: 17 LVLDCYSHKGLFMDGL-------EVYRMMR------VYGFVPAVSACNALLDALYRQNEI 63
L DC ++ + M+G E+ R+MR VY P+ ++ N L+ ++ ++
Sbjct: 751 LYADCIAYNSM-MNGYLKGGQINEIERLMRNMHENEVY---PSSASYNILMHGYIKKGQL 806
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMY-NLVIDFY 122
LY MV++G+ P+ T+ L+ LC G E+ + L+ + V NL D
Sbjct: 807 SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDIL 866
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K AF ++M N L + + +DGA E+ + + L V +P
Sbjct: 867 IK------AFSEKSKMSNALQLF-SYMKWVGDIDGA-----FELKEDMKALGV----VPS 910
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +++ L GK A ++F + T ++ L KE ++ +A +
Sbjct: 911 EVAESS--IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL 968
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
L+ G+ V Y + LC + + L ++ +G +P +
Sbjct: 969 KQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYA 1028
Query: 303 KGKWKEVEELLSAVLDKGLL 322
G ++ E+LL + D+G++
Sbjct: 1029 TGTMQDGEKLLKDIEDRGIV 1048
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
VN KE + + + + E G+ + + + G K + V L LD+
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
LD C+ ++ C+ ++ KA ++ K++ + + TY+ +L+ K GR + A+
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSAL 284
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
RI D M++ + + ++ I++ +LC LK +A M ++ PDE +Y +I GF
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV--ASQCG 302
++ + G+ Y V++L + P + +LR + G+ C+ S + S+C
Sbjct: 98 IVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGF-SCSAIFSSLLRTISRCD 156
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLME--------YYCSN-----RQIDKA--IAL 347
V+ L++A + +G +LD+ M+ + C+N I+K+ + L
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWL 216
Query: 348 HIKIEKL--KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
+K E L K LDV T +++L+ L G++ +A + MK ++ ++ ++ +++
Sbjct: 217 FLK-ESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYV 275
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ D+M K G + D TY +I
Sbjct: 276 KKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 184/444 (41%), Gaps = 52/444 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + ++ YS G++ + + V++ M G +P V CN+ + AL++ A
Sbjct: 310 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 369
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM----------YN 116
C++ +MV G P+ ++S A +C + V+ ++ I++ ++ +N
Sbjct: 370 KCIFDSMVLKGPKPDIISYSTNASWVCY--WYVTVVWVMWHNIFNLMLTKGIAPNKHVFN 427
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
++I+ Y++ G A +M N + + P T+++
Sbjct: 428 ILINAYARCGMMDKAMLIFEDMQN-KGMIPDTVTFAT----------------------- 463
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
VI L +G+ A F D + + GC+++ G +
Sbjct: 464 --------------VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 509
Query: 237 KEAIQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+A ++ + + I Y+ + +N LCKE + E ++ +V+ G P + +
Sbjct: 510 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 569
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G +E LL A+ G+ + + +L++ YC N +ID A+ + +
Sbjct: 570 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 629
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAM 414
Y ++L GLF+ R A ++F M E VS ++ +V+ LC +A
Sbjct: 630 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 689
Query: 415 KNHDEMLKMGHKPDEATYKQVISG 438
+++ M K D T+ VIS
Sbjct: 690 MLLEKLFAMNVKFDIITFNIVISA 713
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 191/443 (43%), Gaps = 48/443 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G +P + CN+++ L + E+ A + MV G++P+ FT+SL+ LC+S +
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299
Query: 100 --VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEM-----------CNG---- 141
V+ ++++G +S+ YN +I YS G + + +M CN
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359
Query: 142 -------------------RNLTPGFSTYSSILDGARRYEKTEV---SDRIVGLMVEKKL 179
+ P +YS+ + T V I LM+ K +
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGI 419
Query: 180 LP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P KH + +I + G A +IF+ ++ + T ++ +L + GR+ +
Sbjct: 420 APNKHVF---NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 476
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-LSRFV 297
A+ ++ + + G+ ++ Y + C + + L+ +++ + P ++ S +
Sbjct: 477 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 536
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ C +G+ E ++++ ++ G + +SLME YC +++A AL + +
Sbjct: 537 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 596
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKN 416
+ Y L+DG K+GR+++A+ +F M V +S + I++ L + A K
Sbjct: 597 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 656
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
EM++ G TY V+ G
Sbjct: 657 FHEMIESGTTVSIHTYGVVLGGL 679
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/440 (19%), Positives = 180/440 (40%), Gaps = 49/440 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P + N L+D R + L + G ++++G+ P+ F++SL+ + + G+ + +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 232
Query: 101 VLGLLDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L +++ G+ ++ N +I K + A + +M + + P TYS I+DG
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLIIDGLC 291
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++R++ MVE P + +I S G + +FK+ +
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNS--LIHGYSISGMWNESVRVFKQMSSCGVIPT 349
Query: 220 DDTCGCMLKALSKEGRVKEA--------------------------------------IQ 241
D C + AL K GR EA
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHN 409
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
I++L+ +GI + +N + ++ + D+ +G IP + + ++S C
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK-IEKLKGSLDV 360
G+ + + ++D G+ L++ C++ ++ KA L + + K V
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ +++ L K+GR+ E I D M + + + +F ++ C + + +A D
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589
Query: 420 MLKMGHKPDEATYKQVISGF 439
M +G +P+ Y ++ G+
Sbjct: 590 MASIGIEPNCYIYGTLVDGY 609
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 138/346 (39%), Gaps = 42/346 (12%)
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F R++ R+ P TY+ ++D RR + ++ IVG +++ L P F Y
Sbjct: 160 FKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG 219
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
K ++ K A +F ++ + + C ++K L K + +A I + + GI
Sbjct: 220 FVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI 276
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ LCK ++ +L +VE G P ++ + + G W E
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY-------- 363
+ + G++ C+S + + + ++A + + D+ +Y
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVC 396
Query: 364 ------------------------------DVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
++L++ + G M++A+ IF+ M+ ++
Sbjct: 397 YWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 456
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +F V+S LC + L A+ + M+ +G P EA Y +I G
Sbjct: 457 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 502
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 160/410 (39%), Gaps = 38/410 (9%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ +M G P N L++A R + A ++ M G+ P+ T++ V L
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468
Query: 93 CRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR G+ + L ++D G+ S +Y +I G+ A + ++EM N PG
Sbjct: 469 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 528
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLLPKHFLSGND-------- 189
+SSI++ + + I+ +MV+ L+ + L GN
Sbjct: 529 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 588
Query: 190 -----------YVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
Y+ L D G+ A +F+ + ++ +L L +
Sbjct: 589 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 648
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R A +++H + E G TV Y + LC+ + +E LL + + +
Sbjct: 649 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 708
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+++ G+ +E +EL A+ GL+ + S ++ ++A L I +EK
Sbjct: 709 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 768
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
+ D + ++ L + +A + E + +S + +++ L
Sbjct: 769 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 818
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 33/321 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ +G +G ++ MM G P V N+L++ + A L AM
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 591
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G+ PN + +Y ++D Y K G A
Sbjct: 592 SIGIEPNCY------------------------------IYGTLVDGYCKNGRIDDALTV 621
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+M + + + P YS IL G + +T + ++ M+E G V+
Sbjct: 622 FRDMLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYG--VVLGG 678
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L T A M+ ++ ++ T ++ A+ K GR +EA +++ IS G+
Sbjct: 679 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 738
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + L KE EE L V + G+ + L+ V K + + LS
Sbjct: 739 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 798
Query: 315 AVLDKGLLLDSFCCSSLMEYY 335
+ + L L++ S L +
Sbjct: 799 IIGENNLTLEASTISLLASLF 819
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 192/446 (43%), Gaps = 11/446 (2%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR- 59
MI++ D+ ++ + ++ + G G E+ G P N L+ +
Sbjct: 217 MIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQA 276
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VM 114
+N ++ L+ + R+ + P +T+ + LC++ + + V L D G VM
Sbjct: 277 KNYASMSEVLHTMIARNHL-PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVM 335
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +I + G FG A EM + + + P TY+++L G+ + E + + M
Sbjct: 336 YTTMIHGLCEMGSFGEARKLWFEMMD-KGMQPNAYTYNTMLHGSLKSGDFERACELYNEM 394
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
K + +I +L GK+ A +FK+ + I+ T +++ KEG
Sbjct: 395 CNKGYGTTTVTC--NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEG 452
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+V E + + + + + S Y + CK+ E LL D+ +G P A
Sbjct: 453 KVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYD 512
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ G ++ V EL + +KG + C+ ++ CS + D+A + K+ +
Sbjct: 513 TMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSET 572
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKA 413
D TY+ L+ G K+G++ +++ + + + + S+SS+ ++ +LC + A
Sbjct: 573 GIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESA 632
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ +M+ G +P + +ISG
Sbjct: 633 KRLWGDMVSKGIEPHANLREHLISGL 658
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 8/299 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F E+Y M G+ CN ++ L + + A ++ M G+ + T+
Sbjct: 382 GDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITY 441
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + C+ GK + + LL+ + S +Y L+I K GDF AA L +M +
Sbjct: 442 NSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDM-S 500
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ L P TY ++L G+ + E + K + + +I +L GK
Sbjct: 501 SKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGY--GTTTATCNKIISELCSRGK 558
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ A +FK+ + I+ T +++ KEG+V +++ + + + +G+ S Y +
Sbjct: 559 SDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS 618
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ LC+ E L D+V +G P A ++ C +G+ E + L +L+
Sbjct: 619 LIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLEN 677
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 20/341 (5%)
Query: 109 IYSSVMYNLVIDFYSKKGD-FGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEV 166
+ +V YN V+ ++G AA L M + R ++T L RR
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERR------ 128
Query: 167 SDRIVGL---MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ + VGL M + P G +I+ L D A + + C+ IE
Sbjct: 129 TGQAVGLLRDMQASGVRPDVVTYGT--LIRGLCDAADVDKAVELLREMCESGIEPNVVVY 186
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
C+L+ K GR + +++ +S RGI Y ++ LC+E + ++ ++ ++E
Sbjct: 187 SCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME 246
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
RG P + + + S C +G KE L + +L+KG+ LD+ ++L+ ++D+
Sbjct: 247 RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Query: 344 AIALHIKIEKLKGSL----DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
A+ L E + G +V T++ ++ GL K GRM +A ++ D M E + +F
Sbjct: 307 AMGL--LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFN 364
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ L + +++KAM+ DEM G +PD TY +I+GF
Sbjct: 365 LLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGF 405
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 173/431 (40%), Gaps = 45/431 (10%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----D 106
N +L AL RQ A+ ++ P +++ + + LC + +GLL
Sbjct: 82 NTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQA 141
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
SG+ V+ Y +I D A + L EMC + P YS +L G + + E
Sbjct: 142 SGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCES-GIEPNVVVYSCLLQGYCKAGRWE 200
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ M + + P + +I L GK A + + + +E T
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTG--LIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV--E 283
++ ++ KEG VKEA+ + + + E+G+ + Y + L + +E GLL +++ E
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318
Query: 284 RGYIPCAMELSRFVASQCGKG-----------------------------------KWKE 308
P + + + C G K K+
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKK 378
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EL+ + GL DSF S L+ +C Q+D+A +L K+ + ++ Y LL
Sbjct: 379 AMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLA 438
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + G ME+A FD M + + ++ ++ C L++ + A + ML G PD
Sbjct: 439 ALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPD 498
Query: 429 EATYKQVISGF 439
TY +I+ F
Sbjct: 499 SVTYSMLINMF 509
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 167/399 (41%), Gaps = 23/399 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +L Y G + +V+ M G P V L+D+L R+ +++ A+ + M+
Sbjct: 187 SCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME 246
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ PN T++++ +C+ G + + L L+ G+ +V YN +I S +
Sbjct: 247 RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Query: 131 AFDRLNEMCNGRNLT-PGFSTYSSILDGARRYEKTEVSDRIVGLMVEK----KLLPKHFL 185
A L EM +G + P T++S++ G + + + ++ +M E L+ + L
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
G + K+ A E++ + A +E T ++ K +V A +
Sbjct: 367 IGGLLRVHKVKK-----AMELMDEMA-SSGLEPDSFTYSILINGFCKMWQVDRAESLLSK 420
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL---SRFVASQCG 302
+ GI Y + LC++ E+ R+ + + C +++ S + C
Sbjct: 421 MRRDGIEPELVHYIPLLAALCEQGMMEQA----RNFFDEMHKNCKLDVVAYSTMIHGACR 476
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
K EE L +LD+GL+ DS S L+ + ++ + A + ++ DVA
Sbjct: 477 LRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAV 536
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
+D L+ G G E+ + + M + S + +
Sbjct: 537 FDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/378 (18%), Positives = 141/378 (37%), Gaps = 48/378 (12%)
Query: 7 GRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GR + D + + ++D +G +V M G P V N L++++ ++ ++
Sbjct: 211 GRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVK 270
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-------YNL 117
A L M+ GV+ + T++ + L + + +GLL+ I+ M +N
Sbjct: 271 EAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNS 330
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
VI K G AF ++ +M T++ ++ G R K + + ++ M
Sbjct: 331 VIHGLCKTGRMRQAF-QVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
L P F +I M + AE + + + IE + +L AL ++G ++
Sbjct: 390 GLEPDSFTY--SILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMME 447
Query: 238 EAIQIY-----------------------------------HLISERGITVRDSDYYAFV 262
+A + H++ E G+ Y +
Sbjct: 448 QARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDE-GLIPDSVTYSMLI 506
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N+ +L+ + G++P + KG ++V EL+ + K +
Sbjct: 507 NMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIA 566
Query: 323 LDSFCCSSLMEYYCSNRQ 340
LDS S++ +N +
Sbjct: 567 LDSKIISTIYTCLVANNE 584
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 192/440 (43%), Gaps = 22/440 (5%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
D V+ Y+ + L+++ RM ++G P + + N+LL+AL N+ A +
Sbjct: 79 DVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFL 138
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKG 126
G+SPN T++++ +I CR +F E++ + + G V Y +I+ +K G
Sbjct: 139 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNG 198
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR----YEKTEVSDRIVGLMVEKKLLPK 182
A +EM R +TP + Y+ ++DG + +E+ +R++ +P
Sbjct: 199 YMSDALKLFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAI 240
+ + +I L GK + I+ R +K E D T ++ L G + A
Sbjct: 258 Y-----NVMINGLCKCGKFDESFEIWHRM--KKNERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++Y ++E G++ Y +N + + EE C L V+E+ + + +
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
K E + + +K DS L+ C N ++KA+++ + E +G LD
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDE 419
Y +++GL ++GR++E + D M + + V++ +L A++
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G P TY +I+G
Sbjct: 490 MVSKGCFPTVVTYNTLINGL 509
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 200/467 (42%), Gaps = 52/467 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-D 76
+++ + G D L+++ M G P V+ N L+D +++ +I AS ++ +++
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKG 126
V PN +++++ LC+ GKF+ + D YS++++ L G
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC-----GSG 304
Query: 127 DFGAAFDRLNEMC-NGRNLTPGFSTYSSILDG---ARRYE--------------KTEVSD 168
+ A EM NG ++P Y+++L+G A R E +T VS
Sbjct: 305 NLDGATRVYKEMAENG--VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362
Query: 169 RIV--GLMVEKK---------LLPKHFLSGND----YVIQKLSDMGKTYAAEMIFKRACD 213
I+ GL K LLP+ + ++ L G A I + A +
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ +L M+ L +EGR+ E + +++ G A +N + + E+
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
++V +G P + + + ++ E L+ +L KG + S LM
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C +++D A+ L + + DV +++++ GL G++E+A++++ MK+ K V
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ +++ +A K D +L+ G +PD +Y + G
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGL 649
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 3/253 (1%)
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE- 248
+++++L D I + +K + +D ++KA +K +A+ I+ + E
Sbjct: 48 HILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEI 107
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y + +N L + ++ +E G P + + C K ++ +
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 167
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ELL+ + ++G D F +L+ N + A+ L ++ + + DVA Y++L+D
Sbjct: 168 AKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 227
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G FK G + A I++ + + V + S+ ++++ LC + ++ + M K
Sbjct: 228 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 287
Query: 427 PDEATYKQVISGF 439
D TY +I G
Sbjct: 288 QDLYTYSTLIHGL 300
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 8/261 (3%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GL 104
A +++++ L R+ + + + M + G PN + V R+ K E L +
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490
Query: 105 LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
+ G + +V+ YN +I+ SK F A+ + EM + + P TYS +++G + +K
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH-KGWKPNMITYSLLMNGLCQGKK 549
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+++ + +EK P + ++ +I L GK A ++ K T
Sbjct: 550 LDMALNLWCQALEKGFKPD--VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+++ K + A +I+ I + G Y + LC H+ + G L D V+
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667
Query: 284 RGYIPCAMELSRFVASQCGKG 304
RG +P A+ + V + G
Sbjct: 668 RGVLPTAITWNILVRAVLDNG 688
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L AL + + EA + G++ Y + + C++ Q ++ LL + E+G
Sbjct: 120 LLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG 179
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + S G + +L + ++G+ D C + L++ + I A
Sbjct: 180 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNAS 239
Query: 346 ALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
+ ++ LKG ++ +Y+V+++GL K G+ +E+ I+ MK+ + ++ ++
Sbjct: 240 EIWERL--LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLI 297
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC L A + + EM + G PD Y +++G++
Sbjct: 298 HGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 147/366 (40%), Gaps = 18/366 (4%)
Query: 29 MDG-LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+DG VY+ M G P V N +L+ R I L+ M ++G ++++
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364
Query: 88 VAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + L + K + + + + S+ Y +++ K G A L E NGR
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV----IQKLSDM 198
F+ YSS+++G R + D + G++ + + KH N +V I
Sbjct: 425 GDLDTFA-YSSMINGLCREGRL---DEVAGVLDQ---MTKHGCKPNPHVCNAVINGFVRA 477
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
K A F + T ++ LSK R EA + + +G Y
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N LC+ + + L +E+G+ P + + C GK ++ +L S +
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 597
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+ + + ++LME + R ++A + I + D+ +Y++ L GL R+ +
Sbjct: 598 RKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISD 657
Query: 379 AVRIFD 384
AV +
Sbjct: 658 AVGFLN 663
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 173/409 (42%), Gaps = 52/409 (12%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS---GK 97
Y P V + + ++D +++ E+ A L+ M+ G P+ T+S + LC++ K
Sbjct: 197 YNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNK 256
Query: 98 FEVVLG-LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
E +L + D G+ + YN++I Y G A L +M +G L P TY ++
Sbjct: 257 AEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYILLI 315
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ + + + MV K P + ++ + G + +
Sbjct: 316 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIY--HILLHGYATKGALIDVRDLLDLMIRDG 373
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I + ++ A +K G V +A+ + + + G+ Y +++LCK + E+
Sbjct: 374 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAV 433
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+V G P + + + C G+WK+VEEL ++++G+ D+ +++M+
Sbjct: 434 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 493
Query: 336 CSNRQIDKA-----IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
C ++ +A + +HI ++ +V +Y+ L+DG G+M+E+++ F
Sbjct: 494 CKEGRVVEAQDFFDMVIHIGVKP-----NVVSYNTLIDGYCFVGKMDESIKQF------- 541
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
D M+ +G +PD TY +++G+
Sbjct: 542 ---------------------------DRMVSIGLRPDSWTYNALLNGY 563
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 201/437 (45%), Gaps = 23/437 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D + +G ++ M GF P V ++L+D L + + A + M
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGA 130
GV PN T++++ + C G+ E + LL SG+ V+ Y L+I +Y K G
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A + M + P + Y +L G A + +V D ++ LM+ + +H +
Sbjct: 327 ARSVFDSMVR-KGQKPNSTIYHILLHGYATKGALIDVRD-LLDLMIRDGIPFEH--RAFN 382
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + G A F + + ++ L K GRV++A+ ++ +
Sbjct: 383 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSE 442
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G++ + + ++ LC + ++V L +++ RG P A+ ++ + + C +G+ E
Sbjct: 443 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 502
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++ V+ G+ + ++L++ YC ++D++I ++ + D TY+ LL+G
Sbjct: 503 QDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNG 562
Query: 370 LFKDGRMEEAVRIFDYM--KELKVVSSSSFVIV-----VSRLCHLKELRKAMKNHDEMLK 422
FK+GR+E+A+ ++ M K++K + +S +I+ R+ +EL M + L+
Sbjct: 563 YFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLR 622
Query: 423 MGHKPDEATYKQVISGF 439
+ TY V+ G
Sbjct: 623 I------ETYNTVLGGL 633
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/381 (18%), Positives = 158/381 (41%), Gaps = 33/381 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G+ S ++L Y+ KG +D ++ +M G A N L+ A + +
Sbjct: 337 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 396
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + M ++G+ P+ ++S V ILC+ G+ E +Y
Sbjct: 397 AMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVE-------DAVY--------------- 434
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
N+M + L+P +++S++ G + + + + M+ + + P
Sbjct: 435 --------HFNQMVS-EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 485
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ ++ L G+ A+ F ++ + ++ G++ E+I+ +
Sbjct: 486 M--NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G+ Y A +N K + E+ L R++ + CA+ + + G+
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
EL ++D+G L ++++ C N +D+A+ + + + LDV T+++
Sbjct: 604 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNI 663
Query: 366 LLDGLFKDGRMEEAVRIFDYM 386
+++ L K GR++EA +F M
Sbjct: 664 VINALLKVGRIDEAKSLFSAM 684
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/414 (18%), Positives = 172/414 (41%), Gaps = 44/414 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + A ++++ Y+ G + + MR G P V + + ++ L + +
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVMY-NLVID 120
A + MV +G+SPN +++ + LC G++ E+ +++ GI+ ++ N ++D
Sbjct: 432 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 491
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K+G A D +M + P +Y++++DG K + S + MV L
Sbjct: 492 NLCKEGRVVEAQDFF-DMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLR 550
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ G+ A +++ + ++ T +L L + GR+ A
Sbjct: 551 PDSWTY--NALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAR 608
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++Y + +RG +R Y + LC+ +E + D+ + + + + +
Sbjct: 609 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINAL 668
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G+ E + L SA++ +G + V
Sbjct: 669 LKVGRIDEAKSLFSAMVLRGPVPH-----------------------------------V 693
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKA 413
TY +++ ++G +EE+ +F M++ + S + +++ RL ++R+A
Sbjct: 694 ITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 10/205 (4%)
Query: 189 DYVIQKLSDMGKTY-AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLI 246
+ +I+ L D +T A +M+F+R + + ++K L E + +EA+++ H+
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192
Query: 247 SERGITVRDS--DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++ G + Y ++ KE + ++ L +++ +G+ P + S + C
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ 252
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS---LDVA 361
+ E +L + DKG++ ++ + ++ YCS Q+++A+ L ++K+ GS DV
Sbjct: 253 AMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRL---LKKMSGSGLQPDVV 309
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYM 386
TY +L+ K GR EA +FD M
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSM 334
>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11710, mitochondrial-like [Cucumis sativus]
Length = 644
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 202/452 (44%), Gaps = 57/452 (12%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+V R +R+ GF + A N L+ L + E +Y M+ G S N T++L+ L
Sbjct: 165 DVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYAL 224
Query: 93 CRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKG--DFGAAFDRLNEMCNGRNLT 145
C K VV +L I+ +V+ +N++ID +K G D R E+ +G +++
Sbjct: 225 CNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMGEMDLALKLTRNIEVISGGSVS 284
Query: 146 P----------GF-------------------------STYSSILDGARRYEKTEVSDRI 170
P GF TY++++DG R +V+ R+
Sbjct: 285 PNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAFRL 344
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
MVE +L+P F+ + +I L G+ A + + +I + T + K L
Sbjct: 345 CDEMVEMRLIPDTFVYNS--LIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402
Query: 231 SKEGRVKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
G + +A+++++ I ER + VRD+ Y +N + + LL ++ G P
Sbjct: 403 CVSGHLNKALRVHYYIVERSL-VRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPD 461
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ V C +GK + + + DK ++ + S+++ C I A L
Sbjct: 462 MVTYGTPVDGHCKEGKIEAAVQ----IYDKAVVYN-----SILDGLCKQGSIYAAKLLVD 512
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLK 408
K+++ G LD TY+ LL G +G +E+A +F M + +V+ S+ I+++ LC +
Sbjct: 513 KLQQ-NGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMG 571
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+++AM+ M G PD TY +I+ F+
Sbjct: 572 LIQQAMELMRAMSSQGIIPDLITYTTLITNFV 603
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 165/362 (45%), Gaps = 8/362 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+V+ M GF P V L++ L + ++ A L+ M+ G+SP+ FT++ +
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI 203
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC +++ V LL+ + S +M N+V+D K+G A D ++ M G +
Sbjct: 204 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG-GV 262
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY++++DG + + + ++ +MV + + + +I + + A
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCN--VVSYNTLINGYCKIQRIDKA 320
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+F+ C +++ T ++ L GR+++AI +++ + G Y ++
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK H+ E LL+ + P + + C G + +L S + +GL D
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + ++ C +D+A L ++++ + TY+ + GL ++ + A+++ +
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLE 500
Query: 385 YM 386
M
Sbjct: 501 EM 502
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 175/415 (42%), Gaps = 9/415 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + + M +G P V ++++ N + A + +++ G P+ T++ + +
Sbjct: 76 LSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRG 135
Query: 92 LCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC GK L + D + + V Y +++ K A + +EM + ++P
Sbjct: 136 LCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI-AKGISP 194
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+S++ + + ++ MV+ K++P + + V+ L GK A
Sbjct: 195 DIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPN--VVSLNIVVDALCKEGKVTEAHD 252
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +E T ++ + EA++++ ++ G Y +N C
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + ++ L ++ + IP M S + C G+ ++ L + ++ G + +
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S L++Y C N ++ +A+AL IE DV Y++ +DG+ + G +E A +F +
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + I++ LC L +A K EM + G + TY + G +
Sbjct: 433 APRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLL 487
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P E ++ + S + V L + G+ D + + ++ +C ++D A+++
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCH 406
KI KL D AT+ L+ GL G++ EA+ +FD M E + ++ +++ LC
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++L +A+ EM+ G PD TY +I
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 8/278 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L++V+D +G + +V MM G P V AL+D ++E+ A ++ M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDF 128
VR+G N +++ + C+ + + + L + I +++ Y+ +I G
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A NEM + P TYS +LD + + + ++ + L P +
Sbjct: 353 QDAIALFNEMVACGQI-PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPD--VQVY 409
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ I + G AA +F ++ T M++ L K G + EA +++ + E
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
G Y L + ++ LL +++ RG+
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGF 507
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
H G D + ++ M G +P + + LLD L + + + A L A+ + P+
Sbjct: 348 HVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQ 407
Query: 84 TWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEM 138
+++ +CR+G E L + G+ V +N++I K+G A EM
Sbjct: 408 VYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQKL 195
L G TY++I G + KT R + L+ E +L + F +S +++ L
Sbjct: 468 DENGCLRNG-CTYNTITQGLLQNNKTS---RAIQLLEE--MLARGFSADVSTTALLVKML 521
Query: 196 SDMGKTYAAEMIF 208
SD G + + I
Sbjct: 522 SDDGLDQSVKQIL 534
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 179/391 (45%), Gaps = 11/391 (2%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----G 108
L+ R + LA L G M++ G P+ T + C+ +F+ + L+DS G
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 109 IYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ +V +YN VI+ K D A + M + + TY++++ G + +
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGM-EKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 168 DRIVGLMVEKKLLPKH-FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
R++ MV++K+ P F + +I G A+ ++K + T +
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTA---LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ +GR+ +A ++ L+ +G Y + CK + E+ L ++ +G
Sbjct: 832 INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+ A + + C GK +++ + ++D G+ D + L++ C+N +I+KA+
Sbjct: 892 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLC 405
+ ++K + +D+ TY++++ G+ ++ +++EA +F + V + + +++ ++S LC
Sbjct: 952 MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
R+A K M + G P E Y + +
Sbjct: 1012 RNGLRREADKLCTRMKEDGFMPSERIYDETL 1042
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 175/421 (41%), Gaps = 24/421 (5%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+ M ++G + + L+ R + + LA + G M++ G P+ T+ + C
Sbjct: 89 QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLR 148
Query: 96 GK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ F +V ++ SG +V+ YN +ID K GD A + LNEM L T
Sbjct: 149 NRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVT 208
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+++L G + + RI+ M ++++ P F +I G A+ ++K+
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF--TALIDAFVKQGNLDEAQELYKQ 266
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
I T ++ L GR+ A + + L++ +G Y +N CK +
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR 326
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E+ L + + G + + + C GK + +++ S ++ G+ D
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L+ C N +I A+ + + L + Y++++ GL K ++EEA +F +
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446
Query: 391 V-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM------------GHKPDEATYKQVIS 437
V + ++ I++ LC R+A DE+ + GH + T QV
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREA----DELFRRMKEDGIICQAEDGHLGEHGTNNQVSL 502
Query: 438 G 438
G
Sbjct: 503 G 503
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVV 282
+L A++K + I ++H + GI+ D Y+F ++ C+ + LL ++
Sbjct: 621 VLTAIAKMNKFDIVIYLFHKMENLGIS---HDLYSFTILIHCFCRCSRFSLALALLGKMM 677
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
+ G+ P + L + C +++E L+ ++ + GL + ++++ C NR ++
Sbjct: 678 KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A+ + +EK D TY+ L+ GL GR +A R+ M + K+ + F ++
Sbjct: 738 NALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +A + EM++ P+ TY +I+GF
Sbjct: 798 DTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 10/220 (4%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVV 282
+L A++ R + I + GI+ D Y+F ++ C+ + +L ++
Sbjct: 71 LLTAIANLRRYETVIYFSQQMELFGIS---HDLYSFTILIHCFCRCSRLSLALSILGKMM 127
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
+ GY P + + C + + + L+++++ G + ++L++ C N ++
Sbjct: 128 KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVN 187
Query: 343 KAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
A+ L ++EK KG L D+ TY+ LL GL G +A RI M + ++ +F
Sbjct: 188 IALELLNEMEK-KGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTA 246
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ L +A + + +ML+ P+ TY +I+G
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ GL ++++ IP ++ +R + + K+ V L + + G+ D + + L
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ +C + A+AL K+ KL + T LL+G + R +EAV + D M EL +
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716
Query: 392 VSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + V++ LC ++L A++ M K G D TY +ISG
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ A+ I + + G + + ++ C ++ + L+ +V+ GY P + +
Sbjct: 115 RLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYN 174
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKG-LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ C G ELL+ + KG L D ++L+ C + + +A + + K
Sbjct: 175 TLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK 234
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
+ + DV T+ L+D K G ++EA ++ M + + ++ ++ +++ LC L
Sbjct: 235 RRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYH 294
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A K D M G P+ TY +I+GF
Sbjct: 295 AKKTFDLMASKGCFPNVVTYNTLINGF 321
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
SL+ +C +I A +L + K +V Y+ L+D L K+G + A+ + + M++
Sbjct: 140 SLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKK 199
Query: 390 KVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+++ ++ +++ LC+ E R+A + +M K PD T+ +I F+
Sbjct: 200 GRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 164/404 (40%), Gaps = 44/404 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V N ++ ++R + A + M G+ P+ T++ + C++G +
Sbjct: 332 GIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEA 391
Query: 102 LGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L +G+ SV+ YN+++D Y + GD A EM + P STY+ +++
Sbjct: 392 LWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE-QGCQPDVSTYTILMN 450
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G+R+ + M+ K L P F +AE+I
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCF------------AYNTRISAELIL-------- 490
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
G EA Q+ ++ RGI+ Y F++ LCK ++
Sbjct: 491 -----------------GSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYV 533
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +V G P + + + + C +G+ +E ++ +L GL + + + YC
Sbjct: 534 LWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYC 593
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+ A K+ + + TY+VL+ L + GR A + F M E + +
Sbjct: 594 RRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKY 653
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ C +A++ + EM + G PD T+ + GF
Sbjct: 654 TYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 173/428 (40%), Gaps = 10/428 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM-- 73
+LVL + + D VY M G P++ N LLD+ +R+ + A+ L M
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVMYNLVIDFYSKKGDFG 129
G P+ T+++V L R G+ E L+D S S+ +N +I Y +G
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVE 319
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A EM N + P TY++I+ G R E + M LLP L +
Sbjct: 320 KAGALQLEMEN-EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPD--LITYN 376
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G A +F + T +L + G ++EA + + E+
Sbjct: 377 SLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ 436
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G S Y +N K V +++ +G P + ++++ G E
Sbjct: 437 GCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEA 496
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L ++ +G+ D+ + ++ C + + A L +K+ D TY L+
Sbjct: 497 FQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHA 556
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+ GR+ EA IFD M + S+ ++ + + C L A +ML+ G +P+
Sbjct: 557 HCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPN 616
Query: 429 EATYKQVI 436
E TY +I
Sbjct: 617 EVTYNVLI 624
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
F+ + V++ L D + ++ IE T +L + +EGRV +A ++
Sbjct: 195 FIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLL 254
Query: 244 HLISER--GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ R G D Y +N L ++ + E+ L+ D + A + +
Sbjct: 255 REMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV-DRMRMSKKASAFTFNPLITGYF 313
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+G ++ L + ++G++ ++++ + ++ A +++ + D+
Sbjct: 314 ARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLI 373
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY+ L++G K G ++EA+ +F +K + S ++ I++ C L +L +A + EM
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 421 LKMGHKPDEATYKQVISG 438
++ G +PD +TY +++G
Sbjct: 434 VEQGCQPDVSTYTILMNG 451
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
R++ G P E + + + + +W ++ + + +L G+ ++L++ +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 338 NRQIDKAIALHIKIEKLKGSL---DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
++D+A L ++E G DV TY+V+++GL + G +E+A ++ D M+ K S+
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDV-TYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+F +++ + KA EM G P TY +I G
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHG 346
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 11 QSDALSLVLDCYSH--KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
Q D ++ ++H +G + +++ M V G P+ + A R+ + A
Sbjct: 544 QPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG 603
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYS 123
+ M+ +GV PN+ T++++ LCR G+ ++ +L+ G+ + Y L+ID
Sbjct: 604 WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNC 663
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
K+G++ A +EM + + P T++++ G
Sbjct: 664 KEGNWEEAIRLYSEM-HQHGIHPDHCTHNALFKG 696
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 179/407 (43%), Gaps = 4/407 (0%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY MR G P V N L+ AL + N + A + M R G P+ T++ + +LC
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205
Query: 94 RSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+ + + +L + + YN ++ ++ F +++M GR L P TY++
Sbjct: 206 KLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMV-GRGLQPNVITYTT 264
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
I+D + + ++ I+ MV P + +++ L D G+ + A +++
Sbjct: 265 IVDAFCKAGELRMACAILARMVITGCTPN--VVTFTALVRGLFDDGRVHDALDMWRWMVA 322
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
E + +++ L G +K A I + + + G Y ++ K
Sbjct: 323 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGG 382
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ D+ G P + + V C K + + + L+ +L + ++ ++L+
Sbjct: 383 AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIR 442
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-V 392
C R++ +A+ + ++ + + TY+ L+ GLF++G +A+ + M+ + +
Sbjct: 443 SLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIEL 502
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ VVS LC + R+AM +M+ G +P+ T+ +I +
Sbjct: 503 SLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 549
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 161/375 (42%), Gaps = 12/375 (3%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GR Q + ++ ++D + G + M + G P V AL+ L+ +
Sbjct: 252 GRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVH 311
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVI 119
A ++ MV +G +P+ +++++ + LC G + +L+S G + +V Y+ +I
Sbjct: 312 DALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 371
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKK 178
D +SK GD G A N+M P Y++++D ++ + I +++E
Sbjct: 372 DGFSKAGDLGGAISIWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN- 429
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P + ++ N +I+ L D + A +F T ++ L +EG +
Sbjct: 430 -CPPNTVTFNT-LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGD 487
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + + GI + Y V+ LC+ E + ++ +G P A S +
Sbjct: 488 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 547
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C +G+ + +L A+ + + LM C+ ++ A+ +K+
Sbjct: 548 AYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYP 607
Query: 359 DVATYDVLLDGLFKD 373
+ T++VL+ G+F++
Sbjct: 608 NTVTWNVLVRGVFRN 622
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 175/437 (40%), Gaps = 44/437 (10%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P+V L+DAL + I AS + M+ G +PN T++ + C+ G + +
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292
Query: 104 LLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L + + +S YN++ID Y K+ L EM P F TY++++D
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK-YGCEPNFITYNTLMDSL 351
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ K + + +M+ + P HF + +I +G+ A +F+ D
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTF--NLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T M+ + R+ +A Q+ ++E G Y + V+ LCK Q +E +
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ GY + S + C + + E+LL + G D + L+ +C
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 339 RQIDKAIAL----------------HIKIEKLKGSL-------------------DVATY 363
Q+DK++A I I+KL S D Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
++DGL K +EA ++ MK+ + ++ ++V +LC + L +A+ + M
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY V GF
Sbjct: 650 DGCLPDTVTYNSVFDGF 666
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 170/407 (41%), Gaps = 16/407 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ + CN LL A R+ + + A L+ SP+ T+S + C++ F+
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 102 LGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LLD GI + +YN +I G +A +M RN P TY+ ++D
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM--QRNCAPSVITYTILVD 244
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + I+ M+E P + + +I +G A ++F + +
Sbjct: 245 ALCKSARISDASLILEDMIEAGCAPN--VVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 302
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ K+ R ++ ++ + + G Y ++ L K + +
Sbjct: 303 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 362
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++ R P + + C G+ EL + D+G L D + + ++ C
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 422
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVV 392
+ID A L ++ + DV TY+ ++ GL K +++EA +++ ++ L VV
Sbjct: 423 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 482
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ ++ LC + L A K EM + G PD Y +I GF
Sbjct: 483 TCST---LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 526
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 161/407 (39%), Gaps = 39/407 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y + DG ++ + M YG P N L+D+L + + A L M+R
Sbjct: 310 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 369
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGA 130
P+ FT++L+ + C+ G+ ++ L D G + YN++I +
Sbjct: 370 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 429
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGA-------RRYEKTEV-------------SDRI 170
A L M P TY+SI+ G YE EV S I
Sbjct: 430 ARQLLERMTEA-GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488
Query: 171 VGLMVEKKLLPKHFL--------SGNDYVIQKLSDMGKTYAAEM-----IFKRACDEKIE 217
GL ++L L S D V + G A ++ F D+
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 548
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ L K RV++ + + ERG+T Y + ++ LCK +E L
Sbjct: 549 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ + + G P + + V C + E LL + G L D+ +S+ + +
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWK 668
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + DKA L ++ S Y +LL L + +M++A+ I++
Sbjct: 669 SAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 28/233 (12%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYH-----LISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
TC C+L A ++ + +EA ++ L S IT Y +N CK ++
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT-----YSTLINGFCKARDFQQAYR 188
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGK-------WKEVE-ELLSAVLDKGLLLDSFCC 328
LL ++ +RG +P + + C G+ +++++ +V+ +L+D+ C
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCK 248
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
S+ R D ++ L IE + +V TY+ L++G K G M+EAV +F+ M E
Sbjct: 249 SA--------RISDASLILEDMIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 299
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ I++ C + + K EM+K G +P+ TY ++ +
Sbjct: 300 NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 167/405 (41%), Gaps = 44/405 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P+ L+ AL + I A L+ M+ G PN T++++ LCR GK E
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 102 LG----LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
G ++ GI+ SV+ YN +I+ Y K G AF+ L M R P T++ +++
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM-EKRACKPNVRTFNELME 414
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G L +GK Y A + KR D +
Sbjct: 415 G-------------------------------------LCRVGKPYKAVHLLKRMLDNGL 437
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ L +EG + A ++ ++ + + A +N CK+ + +
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASA 497
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L ++ +G + + + C GK ++ +L ++ +L + +++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLS 557
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
++ + +A+ KI KL V TY L+DGL + G + + R+ + MK + +
Sbjct: 558 KGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVY 617
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ I+++ LC + +A K M G P+ TY ++ G++
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 190/446 (42%), Gaps = 49/446 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++ +GL ++ M G P V L+D L R +I
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF-----------------------EVVL 102
A+ + MV+DG+ P+ T++ + C+ G+ E++
Sbjct: 355 ANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 103 GL----------------LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
GL LD+G+ ++ YN++ID ++G A+ L M N +L
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM-NSFDLE 473
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P T+++I++ + K +V+ +GLM+ K + ++G +I + ++GKT A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE-VTGTT-LIDGVCNVGKTRDAL 531
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I + ++ + +L LSK ++KE + + I++ G+ Y V+ L
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ +L + G +P + + C G+ +E E+LLSA+ D G+ +
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL------FKDGRMEEA 379
+ +++ Y +N ++D+A+ + + L+ Y LL G ++ E
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI 711
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLC 405
+ +++L +S + +V+RLC
Sbjct: 712 KELISVVEQLGGSTSGLCIFLVTRLC 737
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 149/353 (42%), Gaps = 16/353 (4%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + P A+++A +Q + +AS G M+R G+S ++ T + + +C GK
Sbjct: 467 MNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGK 526
Query: 98 FEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L +L++ + ++ N+++D SK L ++ N L P TY+
Sbjct: 527 TRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKI-NKLGLVPSVVTYT 585
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++DG R S R++ LM LP + +I L G+ AE +
Sbjct: 586 TLVDGLIRSGDISGSFRMLELMKLSGCLPNVY--PYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC------ 266
D + T M+K G++ A++ + ERG + D Y + +
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGI 703
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E PE + L+ V + G + + V C +G+ E L+ +L G+ L+
Sbjct: 704 RETDPECIKELISVVEQLGGSTSGLCIF-LVTRLCKEGRTDESNGLVQTILKSGVFLEK- 761
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ME YCS ++ K + L + K ++ +++ GL K+G E A
Sbjct: 762 AIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERA 814
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 200/470 (42%), Gaps = 50/470 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D G + V R M G P+V NAL++ + + A L M +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
PN T++ + + LCR GK ++ +LD+G+ ++ YN++ID ++G
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNV 459
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A+ L M N +L P T+++I++ + K +V+ +GLM+ K + ++G
Sbjct: 460 AYKLLTSM-NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE-VTGTT- 516
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I + ++GKT A I + ++ + +L LSK ++KE + + I++ G
Sbjct: 517 LIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576
Query: 251 IT-------------VRDSD----------------------YYAFVNVLCKEHQPEEVC 275
+ +R D Y +N LC+ + EE
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME-Y 334
LL + + G P + + V GK E + A++++G L+ SSL+ +
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696
Query: 335 YCSNRQIDKAIALHIK-----IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
S + I + IK +E+L GS L+ L K+GR +E+ + + +
Sbjct: 697 VLSQKGIRETDPECIKELISVVEQLGGSTS-GLCIFLVTRLCKEGRTDESNGLVQTILKS 755
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V + I++ C K+ K ++ +LK G P ++ VI G
Sbjct: 756 GVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGL 805
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L + GR++EA + + E+G Y + LC ++ L +++ RG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C GK +E + ++ G+ ++L+ YC + ++ A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
L +EK +V T++ L++GL + G+ +AV + M + + S+ +++ L
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + A K M +PD T+ +I+ F
Sbjct: 452 CREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAF 486
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 175/452 (38%), Gaps = 63/452 (13%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
V GF ++LL +L + + LA Y M DG + + LC++G E
Sbjct: 153 VSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTE 212
Query: 100 V----------VLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
V LLDS I +S++ + + + A + M P
Sbjct: 213 AAEMFMCKILKVGFLLDSHIVTSLLLG-----FCRGLNLRDALKVFDLMSREGTCAPNSV 267
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMI 207
+YS ++ G + E + + M EK P S Y +I+ L D G A +
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP----STRTYTVLIKALCDRGLIDKAFNL 323
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
F + T ++ L ++G+++EA + + + GI Y A +N CK
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL------ 321
+ + LL + +R P + + C GK + LL +LD GL
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 322 ---LLDSFC-----------------------C---SSLMEYYCSNRQIDKAIALHIKIE 352
L+D C C ++++ +C + D A A +
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV----SRLCHLK 408
+ SLD T L+DG+ G+ +A+ I + + +++++++ + V+ S+ C LK
Sbjct: 504 RKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLK 563
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
E + ++ K+G P TY ++ G +
Sbjct: 564 E---ELAMLGKINKLGLVPSVVTYTTLVDGLI 592
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 195/466 (41%), Gaps = 47/466 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S++++ S G E+Y M++ G P V N+LL+ + QN + A L+ V
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSS-VMYNLVIDFYSKKGDFG 129
G++ N T++++ + L GK L + GI S V YN +I + KKG
Sbjct: 423 EHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMD 481
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGN 188
A+ L + R L P TY+ ++DG + +E + + M+ + P H
Sbjct: 482 KAYSMLKSILE-RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTF--- 537
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ VI L G+ + + T ++ KEG V A+ Y + E
Sbjct: 538 NTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCE 597
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI+ Y + ++ LCK ++ + D+ +G + S + C +
Sbjct: 598 SGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMES 657
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ + +LD GL ++ +S++ + ++ A+ LH ++ K K D+ Y ++
Sbjct: 658 ASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIG 717
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH----------LKE-------- 409
GL K+G++ A+ ++ M +V + ++++ L + LKE
Sbjct: 718 GLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITP 777
Query: 410 -----------------LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
L++A + HDEML G PD+ TY +++G
Sbjct: 778 SVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 198/480 (41%), Gaps = 50/480 (10%)
Query: 5 CEGR---DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
C GR +S S + +L + D +E +R M + VP V N LL A+ R+N
Sbjct: 140 CSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRN 199
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYN 116
+ A LY MV G+ + +T +V + + GKFE V + Y+
Sbjct: 200 MVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYS 259
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR----YEKTEVSDRIV- 171
+++ ++ D A + L EM P TY++++ + E + D +V
Sbjct: 260 ILVQAVCRRLDLNLACELLKEM-REFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318
Query: 172 -----GLMVEKKLLPKHFLSGN------------------DYVI--------QKLSDMGK 200
++V + L+ + + G+ D VI K+ DM K
Sbjct: 319 VGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEK 378
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
Y ++ R I+ +L+ ++ ++ A ++ E GIT Y
Sbjct: 379 AYE---LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNI 434
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ L + + E C L +V +G P + + + C KG + +L ++L++G
Sbjct: 435 LLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERG 494
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L ++ + L++ + ++A + ++ + T++ +++GL K GR+ E
Sbjct: 495 LKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ 554
Query: 381 -RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++K+ V +S ++ ++ + A+ + EM + G PD TY +I G
Sbjct: 555 DKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 198/474 (41%), Gaps = 60/474 (12%)
Query: 20 DCYS---------HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
DCY+ +G F + + ++ + G +A + L+ A+ R+ ++ LA L
Sbjct: 219 DCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELL 278
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDF-----YSKK 125
M G P+K T++ V + G F L L D + + N+++ Y
Sbjct: 279 KEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVL 338
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
GD A +E+ G + P +S +++G + E + + M + P F+
Sbjct: 339 GDVNLALQLFDEVVEG-GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFI 397
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +++ + A +F A + I T +LK L + G+V EA ++
Sbjct: 398 VNS--LLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEK 454
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF--------- 296
+ +GIT Y + CK+ ++ +L+ ++ERG P A+ +
Sbjct: 455 MVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGD 514
Query: 297 -------------------------VASQCGK-GKWKEVEELLSAVLDKGLLLDSFCCSS 330
V + GK G+ E ++ L+ + +G + S +S
Sbjct: 515 SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNS 574
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK--- 387
+++ + +D A+ + ++ + S DV TY L+DGL K ++ A+ + MK
Sbjct: 575 IIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG 634
Query: 388 -ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+L VV+ S+ ++ C + ++ A K E+L +G P+ Y +ISGF+
Sbjct: 635 MKLDVVAYSA---LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 161/410 (39%), Gaps = 55/410 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP V + L++ + ++ A LY M G+ PN F + + + E
Sbjct: 355 GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHA 414
Query: 102 LGLLDS----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN------GRNLTPGFSTY 151
GL D GI + V YN+++ + + G ++NE CN + +TP +Y
Sbjct: 415 YGLFDEAVEHGITNVVTYNILLKWLGELG-------KVNEACNLWEKMVSKGITPSLVSY 467
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++ G + + + ++ ++E+ L P +I G + A ++F++
Sbjct: 468 NNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTY--TLLIDGFFKKGDSERAFVVFEQM 525
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
I D T ++ L K GRV E + ++G Y + ++ KE
Sbjct: 526 MAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAV 585
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ R++ E G P D +SL
Sbjct: 586 DSALLAYREMCESGISP-----------------------------------DVITYTSL 610
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C + +I A+ +H ++ LDV Y L+DG K ME A + F + ++ +
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGL 670
Query: 392 VSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ + ++S HL + A+ H EM+K D Y +I G +
Sbjct: 671 TPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLL 720
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 180/432 (41%), Gaps = 36/432 (8%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A S V+ YS G D L+V +M+ G P + CN +D R N + A
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG 126
M G+ PN T++ + + C + E + LL+ + V Y ++ + K+
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS--------------DRI-- 170
D + +M L P TY++++ +++ + + D++
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 171 ---------VGLMVEKKLLPKHFLSGNDY-----VIQKLSDMGKTYAAEMIFKRACDEKI 216
G M E K L D V+ +G+ A+ + +
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 481
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ + +L + + G+ EA ++ ++ E + Y ++ L +E + E C
Sbjct: 482 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 541
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++R++V +G+ P +E++ + S C G+ E + + L+KG ++ ++++ +C
Sbjct: 542 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 601
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSS 395
N ++D A+++ + + DV TY L+D L K GR+ EA + M + +
Sbjct: 602 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 661
Query: 396 SFVIVVSRLCHL 407
++ V+ R C +
Sbjct: 662 TYRTVIHRYCQM 673
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 5/219 (2%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C + + R+++A++ + GI Y + C H+ EE LL D+
Sbjct: 280 CNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMH 339
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQI 341
+G +P + + C + + EV +L+ + + GL+ D ++L+ +
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 342 DKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV 400
D+A+ +K + KG +D Y ++ L K+GRM EA + + M V + + V
Sbjct: 400 DEALWF-LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVT--YTAV 456
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+ C L E+ KA K M GHKP+ +Y +++G
Sbjct: 457 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 495
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S+ G++++A+++ L+ G+ ++V + ++ E+ L + G +P
Sbjct: 253 SRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNV 312
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + + C + +E ELL + KG L D ++M Y C ++I + L K
Sbjct: 313 VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKK 372
Query: 351 IEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLK 408
+ K G + D TY+ L+ L K +EA+ +E + + +V LC
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEG 432
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A D + +M PD TY V++GF
Sbjct: 433 RMSEA---KDLINEMDCPPDVVTYTAVVNGF 460
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVV----ERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
YY+ + VL K ++C R V+ RG SR + S G+ ++ ++L
Sbjct: 210 YYSMLEVLSKT----KLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + G+ + C++ ++ + +++KA+ +++ + +V TY+ ++ G
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK---ELRKAMKNHDEMLKMGHKPDE 429
R+EEA+ + + M + S+ ++ LC K E+R MK + + G PD+
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK--EHGLVPDQ 383
Query: 430 ATYKQVI 436
TY +I
Sbjct: 384 VTYNTLI 390
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 179/432 (41%), Gaps = 47/432 (10%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++ Y G +GL +R M GFVP V N LL+ L + N +Y M R
Sbjct: 193 MLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERF 252
Query: 77 GVSPNKFTWSLVAQILCR---SGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAA 131
G++PN +T++++ +LC+ +GK L ++ + V YN +I+ Y +KG A
Sbjct: 253 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDA 312
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F L ++ R + P +Y+++++G + + + ++ MV + L P + + +
Sbjct: 313 F-YLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPD--IVTYNTL 369
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I GK + + I TC +++ KEG+ A+ + + G+
Sbjct: 370 IHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGV 429
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG--------- 302
++ Y + LC+E++P LL + + G+ P + + S C
Sbjct: 430 SISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALL 489
Query: 303 --------------------------KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ E E L+ ++ G+L D C +L YC
Sbjct: 490 LKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYC 549
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-- 394
IDKA +L K D +++ L+ G + ++ I D M ++ ++ +
Sbjct: 550 RENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPL 609
Query: 395 --SSFVIVVSRL 404
+ F I+ SRL
Sbjct: 610 TCNPFAILTSRL 621
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 145/337 (43%), Gaps = 22/337 (6%)
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT----E 165
+ V++++++ Y + G M P T + +L+G + T E
Sbjct: 186 WDPVVFDMLVKAYLRMGRVREGLRSFRRMLR-VGFVPTVITSNYLLNGLLKLNYTDRCWE 244
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
V + + + L + L+ +V+ K D GK ++ +E + T
Sbjct: 245 VYEEMERFGIAPNLYTFNILT---HVLCKDGDTGK---VNKFLEKMEEEGFDPDIVTYNT 298
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + ++GR+ +A +Y ++ RG+ Y A +N LCKE + E L +V RG
Sbjct: 299 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRG 358
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +GK +E LL ++ G+ DSF C L+E Y + A+
Sbjct: 359 LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSAL 418
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM------KELKVVSSSSFVI 399
L +++++ S+ Y L+ L ++ R A + + M EL++ +
Sbjct: 419 NLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNE----- 473
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ C + +A+ EM+ KP+ ATY+ VI
Sbjct: 474 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVI 510
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 118/310 (38%), Gaps = 73/310 (23%)
Query: 203 AAEMIFKRA--CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI--TVRDSDY 258
+E +FK C E ++KA + GRV+E ++ + + G TV S+Y
Sbjct: 169 PSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNY 228
Query: 259 ------------------------------YAF---VNVLCKEHQPEEVCGLLRDVVERG 285
Y F +VLCK+ +V L + E G
Sbjct: 229 LLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEG 288
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + + + S C KG+ + L + +G++ D ++LM C ++ +A
Sbjct: 289 FDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAH 348
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA--------------------VRIFDY 385
L ++ S D+ TY+ L+ G K+G+M+E+ V + Y
Sbjct: 349 QLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGY 408
Query: 386 MKELKVVSSSSFVIVVSR----------------LCHLKELRKAMKNHDEMLKMGHKPDE 429
KE K +S+ + V+ + R LC A + M K GHKP+
Sbjct: 409 GKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPEL 468
Query: 430 ATYKQVISGF 439
Y ++I F
Sbjct: 469 EIYNELIKSF 478
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 181/411 (44%), Gaps = 15/411 (3%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+M R + P+ + NA+L L R + A LY M+RD V P FT+ + A+ LCR
Sbjct: 134 QMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 193
Query: 96 GKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G+ L LL + +V+Y VI +G A L+EM +T
Sbjct: 194 GRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL-MGCAADVNT 252
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++ ++ G + R+V M+ P G ++++ L + A + R
Sbjct: 253 FNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYG--FLLRGLCRTRQADEAYAMLGR 310
Query: 211 ACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + + + GC+ EG++ A ++Y ++ +G Y ++ LCK
Sbjct: 311 VPEVNVVMLNTVIRGCL-----AEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ +L ++ E+G P + S + S C G W + +L + KG ++S +
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
++ + ++D+A+ L +++ D+ TY+ ++ L + +M+EA IF + E
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV++ ++ ++ L H ++ ++ +EM+ G D +Y +I
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 158/422 (37%), Gaps = 79/422 (18%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G E+Y MM G P V N L+ L + A + M G +PN T
Sbjct: 329 EGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVT 388
Query: 85 WSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+S + CR+G ++ +LD G +S YN +I K G A + EM
Sbjct: 389 YSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM- 447
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ P TY++I+ + L ND + +
Sbjct: 448 KSQGCKPDICTYNTII---------------------------YHLCNNDQMDE------ 474
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AE IF +E + T ++ AL GR +E +++ + + G + Y
Sbjct: 475 ----AEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYN 530
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ LCKE + LL +++ +G P + + C GK ++ EL +L++
Sbjct: 531 GLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ 590
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL + D+ TY+ L++GL K G A
Sbjct: 591 GL-----------------------------------TPDIVTYNTLINGLCKVGWTHAA 615
Query: 380 VRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ + + + V ++ I++S C ++ L A D+ + G P+E T+ ++
Sbjct: 616 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQN 675
Query: 439 FM 440
F+
Sbjct: 676 FV 677
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
H G + +GL + M ++G V + N L+ AL ++ + + L M+ G+ PN F
Sbjct: 503 HSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNF 562
Query: 84 TWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEM 138
+++++ LC++GK E+ +L+ G+ V YN +I+ K G AA + L ++
Sbjct: 563 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622
Query: 139 CNGRNLTPGFSTYSSIL 155
N N+ P TY+ ++
Sbjct: 623 PN-ENVHPDIVTYNILI 638
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G S + ++ G + + + + M+ G P + N ++ L +++
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM 472
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLV 118
A ++G ++ +GV N T++ + L SG+++ L L + + V YN +
Sbjct: 473 DEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGL 532
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I K+G+ + L EM + + P +Y+ +++ + K + + M+ +
Sbjct: 533 IKALCKEGNVDRSMMLLEEMMT-KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
L P + + +I L +G T+AA + ++ +E +
Sbjct: 592 LTPD--IVTYNTLINGLCKVGWTHAALNLLEKLPNENVH 628
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 192/466 (41%), Gaps = 43/466 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAM 73
S+VL + L++ +MM G P V A + ++ + + E A L+ M
Sbjct: 232 SIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEM 291
Query: 74 VRDGVSPNKFTWSLVAQILCRS---GKFEVVLGLL--DSGIYSSVMYNLVIDFYSKKGDF 128
R GV P+ T++L+ LC++ K E+VL + D +V Y+ +I Y+ G
Sbjct: 292 TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRL 351
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---- 184
A EM R L P T +S L ++ +++ + M K P F
Sbjct: 352 KEAAKMFREM-KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410
Query: 185 -------------------------LSGNDYV----IQKLSDMGKTYAAEMIFKRACDEK 215
++ N +V I + G A +IF +
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T ++ S+ GR+ +A++ ++ + RGI + Y + + C +
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530
Query: 276 GLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L+ +++ +G P + S + S C G+ + ++ D G +SL++
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDG 590
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
YC ++DKA + +E + D+ TY+ LLDG FK+GR+ + + +F M+ V +
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I+++ L A K EM++ G + Y ++ G
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 174/403 (43%), Gaps = 11/403 (2%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
VP N L+D R L L+G ++R G+ ++ T + + + LC + + E +
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213
Query: 104 LL-----DSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILD 156
+L + G + ++V Y++V+ A D L M G +P YS+++
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G +T + + M + + P + + +I L AE++ ++ +
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPD--VVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T CM+ + GR+KEA +++ + +RG+ +F+ LCK + +E
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ +G+ P + +G + ++ L +++ G+ + + L+ Y
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
+D A+ + ++++ S DV TY ++ + GR+ +A+ F+ M + +++
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511
Query: 397 -FVIVVSRLCHLKELRKAMKNHDEMLKMG-HKPDEATYKQVIS 437
+ ++ C L KA + EM+ G +PD + VI+
Sbjct: 512 VYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVIN 554
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/474 (18%), Positives = 182/474 (38%), Gaps = 43/474 (9%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ +G + S ++ Y+ G + +++R M+ G +P + CN+ L +L +
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS------- 112
+ A+ + +M G P+ F++ + G F ++GL +S GI ++
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTIL 446
Query: 113 -----------------------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
V Y+ VI +S+ G A ++ N+M R
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV-ARG 505
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+ P + YSSI+ G + + +V M+ K + P+ + VI L G+
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGI-PRPDIVFFSSVINSLCKDGRVMD 564
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A IF A D T ++ G++ +A +I + G+ Y ++
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
K + + L R++ +G P + +A G+ + +++ G +
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
++ C N D+AI L K+ + + + +++ ++K R EEA +F
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ + S++ +++ L + A M K G P ++I
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRII 798
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 167/409 (40%), Gaps = 52/409 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + ++++ Y+ +G+ D + ++ M+ G P V + ++ R +
Sbjct: 434 NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTD 493
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS--VMYNLVI 119
A + MV G+ PN +S + Q C G E+V +++ GI V ++ VI
Sbjct: 494 AMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVI 553
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM----V 175
+ K G A D + ++ PG T++S++DG K + + +I+ M V
Sbjct: 554 NSLCKDGRVMDAHD-IFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV 612
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
E ++ + L + +++D G T +F+ + ++ T G ML L + GR
Sbjct: 613 EPDIVTYNTLLDGYFKNGRIND-GLT-----LFREMQRKGVKPNTVTYGIMLAGLFRAGR 666
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A + +H + E G TV S Y + LC+ + +E L + + L+
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + + +E +EL + + GLL +
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNE------------------------------ 756
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
+TY V++ L KDG +E+A +F M++ +V S + + R+
Sbjct: 757 -----STYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRM 800
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 183/439 (41%), Gaps = 40/439 (9%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+A V+ YS G D L+V +M+ G P + CN +D R N + A
Sbjct: 245 PEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 304
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG 126
M G+ PN T++ + + C + E + LLD + V Y ++ + K+
Sbjct: 305 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEK 364
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS--------------DRI-- 170
D + +M L TY++++ +++ + + D++
Sbjct: 365 RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGY 424
Query: 171 ---------VGLMVEKKLLPKHFLSGN---------DYVIQKLSDMGKTYAAEMIFKRAC 212
G M E K L LS V+ +G+ A+ + +
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMH 484
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + +L L + G+ EA ++ ++ E+ + Y ++ L KE +
Sbjct: 485 THGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLS 544
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E C ++R++V +G+ P +E++ + S C G+ E + + L+KG ++ ++++
Sbjct: 545 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 604
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV- 391
+C N ++D A+++ + + DV TY L+D L K GR+ EA + M +
Sbjct: 605 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGID 664
Query: 392 VSSSSFVIVVSRLCHLKEL 410
+ ++ V+ R C ++++
Sbjct: 665 PTPVTYRTVIHRYCQMEKV 683
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 177/434 (40%), Gaps = 19/434 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L+ S + V +M+ G A ++ + R ++R A + M R G
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
V PN + + R+ + E L L+ GI +V+ YN +I Y A
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---- 188
+ L++M + L S Y+ + + EV D LM KK+ +H L +
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRD----LM--KKMAKEHGLVRDQVTY 389
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I L+ A K A ++ + ++ AL KEGR+ EA + + +
Sbjct: 390 NTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLS 449
Query: 249 RGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+G D Y A VN C+ + ++ LL+ + GY P + + + C GK
Sbjct: 450 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSL 509
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD-VATYDVL 366
E E+++ ++ +S S LM ++ +A + ++ LKG ++L
Sbjct: 510 EAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDV-VREMVLKGFFPGPVEINLL 568
Query: 367 LDGLFKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L L +DGR EA + + + + ++ +F V+ C EL A+ D+M +
Sbjct: 569 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 628
Query: 426 KPDEATYKQVISGF 439
D TY ++
Sbjct: 629 HADVFTYTTLVDAL 642
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 9/294 (3%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKL--LPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
Y S+L+ + + + + R++ LM + + P+ FL V+ S G+ A +
Sbjct: 213 YYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLR----VMVSYSRAGQLRDALKVL 268
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+E C + + R+++A++ + GI Y + C
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSFC 327
H+ EE LL D+ +G +P + + C + + EV +L+ + + GL+ D
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM- 386
++L+ + D+A+ E+ +D Y ++ L K+GRM EA + + M
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448
Query: 387 -KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K ++ VV+ C L E+ KA K M G+KP+ +Y +++G
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGL 502
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 46/326 (14%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDG-VSPNKFTWSLVAQILCRSG---KFEVVLGLLD 106
+A++ AL ++ + A L M+ G P+ T++ V CR G K + +L ++
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMH 484
Query: 107 SGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ Y ++V Y +++ + G A + +N M + +P TYS ++ G R+ K
Sbjct: 485 THGYKPNTVSYTALLNGLCRTGKSLEAREMMN-MSEEQWWSPNSITYSVLMHGLRKEGKL 543
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRAC-------- 212
+ +V MV K P + ++Q L G+T+ A E + C
Sbjct: 544 SEACDVVREMVLKGFFPGPV--EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 601
Query: 213 ------------DEKIELQDD-----------TCGCMLKALSKEGRVKEAIQIYHLISER 249
D + + DD T ++ AL K+GR+ EA ++ + +
Sbjct: 602 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHK 661
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GI Y ++ C+ + +++ +L ++ R C ++ + CG GK +E
Sbjct: 662 GIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQ--KCKTIYNQVIEKLCGLGKLEEA 719
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYY 335
++LL VL D+ C +LME Y
Sbjct: 720 DKLLGKVLRTASRSDAKTCYALMEGY 745
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 10/230 (4%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S S+++ +G + +V R M + GF P N LL +L R A
Sbjct: 525 PNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 584
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSK 124
+ G + N ++ V C++ + + L +LD ++ V Y ++D K
Sbjct: 585 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGK 644
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
KG A + + +M + + + P TY +++ RY + E D +V ++ EK +L +
Sbjct: 645 KGRIAEATELMKKMLH-KGIDPTPVTYRTVI---HRYCQMEKVDDLVAIL-EKMILRQKC 699
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ + VI+KL +GK A+ + + TC +++ K G
Sbjct: 700 KTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIG 749
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 211/541 (39%), Gaps = 118/541 (21%)
Query: 11 QSDALSLVLD----CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
S L LVLD Y G+F + ++ + GFVP + +CN L++ L +I +A
Sbjct: 152 HSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMA 211
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI-DFY--- 122
+Y + R G++PN +T+ + + LCR G FE + + + V N V Y
Sbjct: 212 VAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEG 271
Query: 123 ---SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
K+ D G ++ L + N Y++++ G K + ++ + MV + +
Sbjct: 272 LCSHKRSDLG--YEALRAL-RAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGI 328
Query: 180 LPKHFLSG-------------------NDYV--------------IQKLSDMGKTYAAEM 206
P ++ G ND V +Q L +MG A+E+
Sbjct: 329 APDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMG--MASEV 386
Query: 207 I--FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI---------------------- 242
+ FK D I L + ++ AL K G+V+EA+++
Sbjct: 387 VDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAG 446
Query: 243 -------------YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
+ + ERGI Y V + +E LL + +G P
Sbjct: 447 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 506
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGL-----LLDSFC----------------- 327
+ +R + C GK KE E L+ + DK L ++D +C
Sbjct: 507 SATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSK 566
Query: 328 ---------CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
C L+ C + DKA+ L ++ L + Y L+ +DG M+
Sbjct: 567 QGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKR 626
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A +FD + E + ++ ++++ C + LR+A ++M + G KPD TY V+
Sbjct: 627 AQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLD 686
Query: 438 G 438
G
Sbjct: 687 G 687
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 180/451 (39%), Gaps = 61/451 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P AL+ A + + A L+ MV +G+ N S + Q LC G V
Sbjct: 327 GIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEV 386
Query: 102 LGLL----DSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEM------------------ 138
+ DSGI+ V+YN+V+D K G A + LNEM
Sbjct: 387 VDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAG 446
Query: 139 ----------------CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
R + P TY+ ++ G R + + ++ + + L P
Sbjct: 447 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 506
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ ++ +I+ L GK AE D+ +E M+ K ++A ++
Sbjct: 507 S--ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYEL 560
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ +S++GI V+ + ++ LC E + ++ LL ++ P + + + + C
Sbjct: 561 FSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCR 620
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G K + + ++++G+ D + ++ YC + +A + +++ DV T
Sbjct: 621 DGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVIT 680
Query: 363 YDVLLDG------------LFKDGRMEEAVRIFDYMKELKVVSSSS----FVIVVSRLCH 406
Y V+LDG F G EE + + E+K + + +++ C
Sbjct: 681 YTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCK 740
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
L+ A+ +DEM+ G +PD TY ++S
Sbjct: 741 TNNLQDAINLYDEMIARGLQPDIVTYTALLS 771
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 177/420 (42%), Gaps = 51/420 (12%)
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI 119
+NE LA + + G N T++ + ++LCR + E L L S I S V+
Sbjct: 74 KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCR-WRLERKLQSLLSEIVGS--KESVL 130
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKK 178
F D A FD L E S +LD + Y + + D + + + K
Sbjct: 131 GF-----DITALFDVLREGGGEVEGEHS-SVLILVLDMLVKAYVRVGMFDEAIDALFQTK 184
Query: 179 ---LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+P H +S N +++ +L + GK A I++ + D T G +KAL ++G
Sbjct: 185 RRGFVP-HIMSCN-FLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+EA+ ++ + E G+ ++ LC + + LR + + +
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI------ 349
+ C + K KE E++ ++++G+ D + +L+ YC + +A+ALH
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
Query: 350 --------------------------KIEKLKGS---LDVATYDVLLDGLFKDGRMEEAV 380
+ ++ + S LD Y++++D L K G++EEAV
Sbjct: 363 IKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAV 422
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + MK ++ + + +++ C +L A +EM + G +PD TY ++ GF
Sbjct: 423 ELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGF 482
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 143/370 (38%), Gaps = 31/370 (8%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ +GR D + + ++ Y +G +D ++ M+ G P + N L+
Sbjct: 424 LLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFS 483
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSSVMY 115
R + A L + G+ PN T + + + LC +GK E L L+ + Y
Sbjct: 484 RNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN--Y 541
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS--SILDGARRYEKTEVS-DRIVG 172
+ ++D Y K A++ + + L S + S L Y+K + +R++
Sbjct: 542 SAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLA 601
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
L VE P + G +I G A+++F + I T M+ +
Sbjct: 602 LDVE----PNQIMYGK--LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 655
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK---------------EHQPEEVCGL 277
++EA I++ + ERGI Y ++ K E + +
Sbjct: 656 VNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPF 715
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ E G P + + + S C ++ L ++ +GL D ++L+ CS
Sbjct: 716 WSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCS 775
Query: 338 NRQIDKAIAL 347
+D+AI L
Sbjct: 776 RGDMDRAITL 785
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 34/289 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
+A++D + N R A L+ + + G+ K + + LC G+++ L LL+ +
Sbjct: 542 SAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLA 601
Query: 111 -----SSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
+ +MY +I + + GD A FD L E R +TP TY+ +++G R
Sbjct: 602 LDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE----RGITPDVITYTMMINGYCRVN 657
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ I M E+ + P + V+ S + A + F + +E+
Sbjct: 658 CLREARDIFNDMKERGIKPD--VITYTVVLDGHSKVNLKMARSLQFSKGSEEE------- 708
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
+A + + E GI Y ++ CK + ++ L +++
Sbjct: 709 -------------KMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMI 755
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
RG P + + ++S C +G L++ + KG+ DS S L
Sbjct: 756 ARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVL 804
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 194/440 (44%), Gaps = 31/440 (7%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+++ Y G +GL +R M GFVP V N LL+ L + N +Y M R
Sbjct: 238 MLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERF 297
Query: 77 GVSPNKFTWSLVAQILCR---SGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAA 131
G++PN +T++++ +LC+ +GK L ++ + V YN +I+ Y +KG A
Sbjct: 298 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDA 357
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F L ++ R + P +Y+++++G + + + ++ MV + L P + + +
Sbjct: 358 F-YLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPD--IVTYNTL 414
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I GK + + I TC +++ KEG+ A+ + + G+
Sbjct: 415 IHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGV 474
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
++ Y + LC+E++P LL + + G+ + + S C + +
Sbjct: 475 SISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFC------QCDC 528
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYY----CSNRQIDKAIALHIKIEKLKGSL-------DV 360
+ A+L K ++D +L Y C +R ++ ++ E L G + D+
Sbjct: 529 IAEALLLKMEMVDKEIKPNLATYRAVJGCLSR-----LSRSMEGESLVGEMVASGXLPDL 583
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
L G ++ +++A + + KE ++ + SF ++ ++ ++++ D
Sbjct: 584 EICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDM 643
Query: 420 MLKMGHKPDEATYKQVISGF 439
MLKMG P+ T K VI G
Sbjct: 644 MLKMGLLPNPLTCKYVIDGL 663
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 145/337 (43%), Gaps = 22/337 (6%)
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT----E 165
+ V++++++ Y + G M P T + +L+G + T E
Sbjct: 231 WDPVVFDMLVKAYLRMGRVREGLRSFRRMLRV-GFVPTVITSNYLLNGLLKLNYTDRCWE 289
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
V + + + L + L+ +V+ K D GK ++ +E + T
Sbjct: 290 VYEEMERFGIAPNLYTFNILT---HVLCKDGDTGK---VNKFLEKMEEEGFDPDIVTYNT 343
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + ++GR+ +A +Y ++ RG+ Y A +N LCKE + E L +V RG
Sbjct: 344 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRG 403
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +GK +E LL ++ G+ DSF C L+E Y + A+
Sbjct: 404 LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSAL 463
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK------ELKVVSSSSFVI 399
L +++++ S+ Y L+ L ++ R A + + M EL++ +
Sbjct: 464 NLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNE----- 518
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ C + +A+ EM+ KP+ ATY+ VJ
Sbjct: 519 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJ 555
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 166/380 (43%), Gaps = 45/380 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D + +++ Y KG D +Y++M G VP + + AL++ L ++ +R
Sbjct: 332 EGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVRE 391
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LVID 120
A L+ MV G+SP+ T++ + C+ GK + LL I++ + + ++++
Sbjct: 392 AHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVE 451
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K+G F +A + + E+ +R+ G+ + + +
Sbjct: 452 GYGKEGKFLSALNLVVEL--------------------QRF----------GVSISQDIY 481
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
Y+I L + +AA+ + +R + + + + ++K+ + + EA+
Sbjct: 482 --------SYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEAL 533
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR-FVAS 299
+ + ++ I + Y A + L + + E L+ ++V G +P +E+ R
Sbjct: 534 LLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLP-DLEICRALFYG 592
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C + + E LLS + + D+ ++L+ + I +++ + + K+ +
Sbjct: 593 YCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPN 652
Query: 360 VATYDVLLDGLFKDGRMEEA 379
T ++DGL+K R++ A
Sbjct: 653 PLTCKYVIDGLWKARRVDSA 672
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 21/249 (8%)
Query: 203 AAEMIFKRA--CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI--TVRDSDY 258
E +FK C E ++KA + GRV+E ++ + + G TV S+Y
Sbjct: 214 PGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNY 273
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N L K + + + ++ G P + C G +V + L + +
Sbjct: 274 --LLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEE 331
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRME 377
+G D ++L+ YC ++D A L+ KI +G + D+ +Y L++GL K+GR+
Sbjct: 332 EGFDPDIVTYNTLINSYCRKGRLDDAFYLY-KIMYRRGVVPDLVSYTALMNGLCKEGRVR 390
Query: 378 EAVRIFDYMKELKVVSSSSFVIVVSRLCH-------LKELRKAMKNHDEMLKMGHKPDEA 430
EA ++F M + S ++ + L H ++E R + HD M+ G PD
Sbjct: 391 EAHQLFHRMVHRGL---SPDIVTYNTLIHGYCKEGKMQESRSLL--HD-MIWNGISPDSF 444
Query: 431 TYKQVISGF 439
T ++ G+
Sbjct: 445 TCWVLVEGY 453
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 179/407 (43%), Gaps = 4/407 (0%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY MR G P V N L+ AL + N + A + M R G P+ T++ + +LC
Sbjct: 150 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 209
Query: 94 RSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
+ + + +L + + YN ++ ++ F +++M GR L P TY++
Sbjct: 210 KLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMV-GRGLQPNVITYTT 268
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
I+D + + ++ I+ MV P + +++ L D G+ + A +++
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPN--VVTFTALVRGLFDDGRVHDALDMWRWMVA 326
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
E + +++ L G +K A I + + + G Y ++ K
Sbjct: 327 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGG 386
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ D+ G P + + V C K + + + L+ +L + ++ ++L+
Sbjct: 387 AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIR 446
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-V 392
C R++ +A+ + ++ + + TY+ L+ GLF++G +A+ + M+ + +
Sbjct: 447 SLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIEL 506
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S ++ VVS LC + R+AM +M+ G +P+ T+ +I +
Sbjct: 507 SLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 553
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 161/375 (42%), Gaps = 12/375 (3%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GR Q + ++ ++D + G + M + G P V AL+ L+ +
Sbjct: 256 GRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVH 315
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVI 119
A ++ MV +G +P+ +++++ + LC G + +L+S G + +V Y+ +I
Sbjct: 316 DALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 375
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKK 178
D +SK GD G A N+M P Y++++D ++ + I +++E
Sbjct: 376 DGFSKAGDLGGAISIWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN- 433
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P + ++ N +I+ L D + A +F T ++ L +EG +
Sbjct: 434 -CPPNTVTFNT-LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGD 491
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + + GI + Y V+ LC+ E + ++ +G P A S +
Sbjct: 492 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 551
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C +G+ + +L A+ + + LM C+ ++ A+ +K+
Sbjct: 552 AYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYP 611
Query: 359 DVATYDVLLDGLFKD 373
+ T++VL+ G+F++
Sbjct: 612 NTVTWNVLVRGVFRN 626
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L+D L ++ + V ++D M++ V + ++ ++V LC + A K DEM
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190
Query: 422 KMGHKPDEATYKQVIS 437
+ G PD+ TY ++S
Sbjct: 191 RKGCPPDDVTYATIVS 206
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 15/372 (4%)
Query: 25 KGLFMDGL-----EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
L DG+ +VY+ M G VP + N L+ A + ++ A + M GV
Sbjct: 173 NSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVV 232
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDR 134
P+ FT++ + + C+ G L + D GI ++ YN +I + K+G A
Sbjct: 233 PDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRM 292
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
E+ ++ P TY++++DG + + E + R+ +MV K L P + + +++K
Sbjct: 293 FGEI---KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPG--VVTYNSILRK 347
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L G+ A + + K++ TC ++ A K G + A++ + E G+T
Sbjct: 348 LCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPN 407
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y A ++ CK + E LL +++ G+ P S V S C K V L
Sbjct: 408 SFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPD 467
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
L KG L+ +L+ C +I+ A L +E S D Y L +K G
Sbjct: 468 EFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSG 527
Query: 375 RMEEAVRIFDYM 386
A + + M
Sbjct: 528 NTNAASDMLEEM 539
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G T ++KR + + C++ A SK V+ A I + + +G+ Y
Sbjct: 179 GITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTY 238
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPC-AMELSRFVASQCGKGKWKEVEELLSAVL 317
+ + CK+ E + +D +ER I + + + C +GK +E + +
Sbjct: 239 NTLIALYCKKGLHYEALSV-QDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK 297
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
D + + ++L++ YC + ++A+ L + V TY+ +L L DGR+
Sbjct: 298 DA--IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIR 355
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+A ++ M E KV + S + +++ C + +L A+K +ML+ G P+ TYK +I
Sbjct: 356 DANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALI 415
Query: 437 SGF 439
GF
Sbjct: 416 HGF 418
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 210/475 (44%), Gaps = 47/475 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D V+ Y GL +E++ ++ +G P+V N +LD L +N I++
Sbjct: 104 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 163
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM- 114
+Y M RDG PN FT++++ + LC++ K + LL ++ Y++V+
Sbjct: 164 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVIS 223
Query: 115 ------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
YN +I+ K+ D+ + ++EM + ++P +
Sbjct: 224 SMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVE-KGISPNVIS 282
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFK 209
YS++++ + E++ ++ M+++ P H LS +++ G T+ A ++
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSS---LVKGCFVRGTTFDALDMWN 339
Query: 210 RACDEKIELQDDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ LQ + +++ G + +A+ ++ + E G + Y + +N K
Sbjct: 340 QMI-RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTK 398
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E + ++ G P + + V + C K+KE E L+ + +
Sbjct: 399 RGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 458
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEK-LKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-- 384
++ ++ C ++D A + ++E+ + ++ TY+ LLDGL K R+EEA +
Sbjct: 459 FNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 518
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+M+ ++ S+S++ ++ C+ A++ +M+ G PDE T +I +
Sbjct: 519 FMRGVE-WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 116/259 (44%), Gaps = 8/259 (3%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
KH + +I+KL+ G+ + + + ++ + +D ++ + G + A++
Sbjct: 72 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 131
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+++ I E G Y ++ L E++ + + + RD+ G+ P + + + C
Sbjct: 132 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 191
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K ++LL + +KG ++ ++++ C + + L + E + V+
Sbjct: 192 KNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPV-----VS 246
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDE 419
Y+ L++GL K+ + V + M E K +S + S+ +++ L + ++ A +
Sbjct: 247 VYNALINGLCKERDYKGGVELMSEMVE-KGISPNVISYSTLINELSNSGQIELAFSLLAQ 305
Query: 420 MLKMGHKPDEATYKQVISG 438
MLK G P+ T ++ G
Sbjct: 306 MLKRGCHPNIHTLSSLVKG 324
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 182/442 (41%), Gaps = 47/442 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + ++ YS G++ + + V++ M G +P V CN+ + AL++ A
Sbjct: 148 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 207
Query: 67 SCLYGAMVRDGVSPNKFTWSLV------AQILCRSGKFEVVLGLLDSGIYSSV-MYNLVI 119
C++ +MV G P+ ++S + A C + + +L GI + ++N++I
Sbjct: 208 KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILI 267
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ Y++ G A +M N + + P T+++
Sbjct: 268 NAYARCGMMDKAMLIFEDMQN-KGMIPDTVTFAT-------------------------- 300
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
VI L +G+ A F D + + GC+++ G + +A
Sbjct: 301 -----------VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 349
Query: 240 IQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
++ + + I Y+ + +N LCKE + E ++ +V+ G P + + +
Sbjct: 350 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 409
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G +E LL A+ G+ + + +L++ YC N +ID A+ + +
Sbjct: 410 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 469
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNH 417
Y ++L GLF+ R A ++F M E VS ++ +V+ LC +A
Sbjct: 470 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 529
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+++ M K D T+ VIS
Sbjct: 530 EKLFAMNVKFDIITFNIVISAM 551
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 195/442 (44%), Gaps = 47/442 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G +P + CN+++ L + E+ A + MV G++P+ FT+SL+ LC+S +
Sbjct: 78 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 137
Query: 100 --VVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEM-----------CNG---- 141
V+ ++++G +S+ YN +I YS G + + +M CN
Sbjct: 138 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 197
Query: 142 -------------------RNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLL 180
+ P +YS++L G + ++D I LM+ K +
Sbjct: 198 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 257
Query: 181 P-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P KH + +I + G A +IF+ ++ + T ++ +L + GR+ +A
Sbjct: 258 PNKHVF---NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-LSRFVA 298
+ ++ + + G+ ++ Y + C + + L+ +++ + P ++ S +
Sbjct: 315 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 374
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C +G+ E ++++ ++ G + +SLME YC +++A AL + +
Sbjct: 375 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 434
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNH 417
+ Y L+DG K+GR+++A+ +F M V +S + I++ L + A K
Sbjct: 435 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 494
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM++ G TY V+ G
Sbjct: 495 HEMIESGTTVSIHTYGVVLGGL 516
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/407 (18%), Positives = 171/407 (42%), Gaps = 19/407 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P + N L+D R + L + G ++++G+ P+ F++SL+ + + G+ + +
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 70
Query: 101 VLGLLDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L +++ G+ ++ N +I K + A + +M + + P TYS I+DG
Sbjct: 71 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLIIDGLC 129
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++R++ MVE P + +I S G + +FK+ +
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNS--LIHGYSISGMWNESVRVFKQMSSCGVIPT 187
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC---- 275
D C + AL K GR EA I+ + +G D ++ +L + C
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADV 244
Query: 276 -GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ ++ +G P + + + G + + + +KG++ D+ ++++
Sbjct: 245 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 304
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVV 392
C ++D A+ + + A Y L+ G G + +A + M K++
Sbjct: 305 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 364
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F +++ LC + + D M++ G +P+ T+ ++ G+
Sbjct: 365 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 411
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 45/337 (13%)
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
R+ P TY+ ++D RR + ++ IVG +++ L P F Y K ++ K
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDK- 66
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A +F ++ + + C ++K L K + +A I + + GI Y
Sbjct: 67 --AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLI 124
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV------------------ASQCG- 302
++ LCK ++ +L +VE G P ++ + + S CG
Sbjct: 125 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 184
Query: 303 ----------------KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
G+ E + + +++ KG D S+++ Y + D +A
Sbjct: 185 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSCLA 242
Query: 347 LHIKIEKLKGSLDVA----TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
I L + +A +++L++ + G M++A+ IF+ M+ ++ + +F V+
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
S LC + L A+ + M+ +G P EA Y +I G
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 339
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 161/413 (38%), Gaps = 38/413 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D ++ +M G P N L++A R + A ++ M G+ P+ T++ V
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302
Query: 90 QILCRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR G+ + L ++D G+ S +Y +I G+ A + ++EM N
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLLPKHFLSGND----- 189
PG +SSI++ + + I+ +MV+ L+ + L GN
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 422
Query: 190 --------------YVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
Y+ L D G+ A +F+ + ++ +L L
Sbjct: 423 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 482
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ R A +++H + E G TV Y + LC+ + +E LL + +
Sbjct: 483 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 542
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ +++ G+ +E +EL A+ GL+ + S ++ ++A L I +
Sbjct: 543 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 602
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
EK + D + ++ L + +A + E + +S + +++ L
Sbjct: 603 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 655
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 33/321 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ +G +G ++ MM G P V N+L++ + A L AM
Sbjct: 369 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 428
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G+ PN + +Y ++D Y K G A
Sbjct: 429 SIGIEPNCY------------------------------IYGTLVDGYCKNGRIDDALTV 458
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+M + + + P YS IL G + +T + ++ M+E G V+
Sbjct: 459 FRDMLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYG--VVLGG 515
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L T A M+ ++ ++ T ++ A+ K GR +EA +++ IS G+
Sbjct: 516 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 575
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + L KE EE L V + G+ + L+ V K + + LS
Sbjct: 576 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 635
Query: 315 AVLDKGLLLDSFCCSSLMEYY 335
+ + L L++ S L +
Sbjct: 636 IIGENNLTLEASTISLLASLF 656
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 168/408 (41%), Gaps = 44/408 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M +G P V A N +++ +R+ ++ A L+ M+ G+ PN T++ V LC++
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 98 FEVVLG----LLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ G ++D G+ + YN +I Y G + L EM + L P TY+
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM-STHGLEPDCITYA 270
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+LD + + + M K + P + ++ + G
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYA--ILLHGYATKGALSEMHSFLDLMV 328
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ M A +K+ ++EA+ I++ + ++G++ + A ++ LCK + +
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ ++ G P S V C GKW++ EEL VLD+G+ +D+ ++LM
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLM 448
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C+ +GR+ EA R+ D M + V
Sbjct: 449 CNLCN-----------------------------------EGRVMEAQRLIDLMIRVGVR 473
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ S+ +V+ C + +A K D M+ G KP+E TY ++ G+
Sbjct: 474 PNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGY 521
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 181/432 (41%), Gaps = 44/432 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V++ + +G ++ M G P V ++D L + + A ++ M
Sbjct: 163 AYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQM 222
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDF 128
+ GV P+ T++ + +GK++ V+ +L+ G+ + Y L++D+ K G
Sbjct: 223 IDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRC 282
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + M + + P + Y+ +L G + LMV + P
Sbjct: 283 REARLFFDSMFR-KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNR----- 336
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
IF M A +K+ ++EA+ I++ + +
Sbjct: 337 -----------------RIFN---------------IMFCAYAKKAMIEEAMHIFNKMRQ 364
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G++ + A ++ LCK + ++ ++ G P S V C GKW++
Sbjct: 365 QGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EEL VLD+G+ +D+ ++LM C+ ++ +A L + ++ +V +Y+ L+
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVA 484
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G GR++EA ++ D M + + ++ I++ C + + A EML G P
Sbjct: 485 GHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTP 544
Query: 428 DEATYKQVISGF 439
ATY ++ G
Sbjct: 545 VVATYNTILHGL 556
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/402 (18%), Positives = 162/402 (40%), Gaps = 43/402 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G + + +++ M +G P LLD L + R A + +M R G+ P+
Sbjct: 241 YLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPD 300
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLN 136
++++ G + LD + + V ++N++ Y+KK A N
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + L+P ++ +++D + + + + M+ + + P F+ + ++ L
Sbjct: 361 KM-RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS--LVYGLC 417
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY------------- 243
+GK AE +F D+ I + ++ L EGRV EA ++
Sbjct: 418 TVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVI 477
Query: 244 --------HLISER--------------GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
H ++ R G+ + Y + CK + ++ L R++
Sbjct: 478 SYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ +G P + + G++ E EL +++ D + + ++ C N +
Sbjct: 538 LMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFV 597
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D+A + ++ LD T+++++ L K GR E+A+ +F
Sbjct: 598 DEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLF 639
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 22/299 (7%)
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
C L GF+ + IL R +S + GL K++ D ++ ++S+
Sbjct: 101 CRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVD-----EATDILLLRMSEF 155
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G C + + ++ +EG+V++A ++ + ++GI Y
Sbjct: 156 G------------CPPDVVAYNT----VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTY 199
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ LCK + G+ + +++RG P + + GKWKEV ++L +
Sbjct: 200 TTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
GL D + L++Y C N + +A + + DVA Y +LL G G + E
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE 319
Query: 379 AVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
D M V + F I+ + +AM ++M + G PD ++ +I
Sbjct: 320 MHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI-A 346
P A S + C G+ + +L G ++ S L++ C +++D+A
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
L +++ + DV Y+ +++G F++G++E+A +F M + + + ++ V+ LC
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + +A +M+ G KPD TY +I G++
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYL 242
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 182/441 (41%), Gaps = 47/441 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + ++ YS G++ + + V++ M G +P V CN+ + AL++ A
Sbjct: 310 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 369
Query: 67 SCLYGAMVRDGVSPNKFTWSLV------AQILCRSGKFEVVLGLLDSGIYSSV-MYNLVI 119
C++ +MV G P+ ++S + A C + + +L GI + ++N++I
Sbjct: 370 KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILI 429
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ Y++ G A +M N + + P T+++
Sbjct: 430 NAYARCGMMDKAMLIFEDMQN-KGMIPDTVTFAT-------------------------- 462
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
VI L +G+ A F D + + GC+++ G + +A
Sbjct: 463 -----------VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 511
Query: 240 IQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
++ + + I Y+ + +N LCKE + E ++ +V+ G P + + +
Sbjct: 512 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 571
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G +E LL A+ G+ + + +L++ YC N +ID A+ + +
Sbjct: 572 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 631
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNH 417
Y ++L GLF+ R A ++F M E VS ++ +V+ LC +A
Sbjct: 632 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 691
Query: 418 DEMLKMGHKPDEATYKQVISG 438
+++ M K D T+ VIS
Sbjct: 692 EKLFAMNVKFDIITFNIVISA 712
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 195/442 (44%), Gaps = 47/442 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G +P + CN+++ L + E+ A + MV G++P+ FT+SL+ LC+S +
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299
Query: 100 --VVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEM-----------CNG---- 141
V+ ++++G +S+ YN +I YS G + + +M CN
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359
Query: 142 -------------------RNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLL 180
+ P +YS++L G + ++D I LM+ K +
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 419
Query: 181 P-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P KH + +I + G A +IF+ ++ + T ++ +L + GR+ +A
Sbjct: 420 PNKHVF---NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-LSRFVA 298
+ ++ + + G+ ++ Y + C + + L+ +++ + P ++ S +
Sbjct: 477 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 536
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C +G+ E ++++ ++ G + +SLME YC +++A AL + +
Sbjct: 537 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 596
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNH 417
+ Y L+DG K+GR+++A+ +F M V +S + I++ L + A K
Sbjct: 597 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 656
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM++ G TY V+ G
Sbjct: 657 HEMIESGTTVSIHTYGVVLGGL 678
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/407 (18%), Positives = 171/407 (42%), Gaps = 19/407 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P + N L+D R + L + G ++++G+ P+ F++SL+ + + G+ + +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 232
Query: 101 VLGLLDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L +++ G+ ++ N +I K + A + +M + + P TYS I+DG
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLIIDGLC 291
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++R++ MVE P + +I S G + +FK+ +
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITY--NSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC---- 275
D C + AL K GR EA I+ + +G D ++ +L + C
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADV 406
Query: 276 -GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ ++ +G P + + + G + + + +KG++ D+ ++++
Sbjct: 407 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 466
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVV 392
C ++D A+ + + A Y L+ G G + +A + M K++
Sbjct: 467 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 526
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F +++ LC + + D M++ G +P+ T+ ++ G+
Sbjct: 527 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 573
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 144/347 (41%), Gaps = 45/347 (12%)
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F R++ R+ P TY+ ++D RR + ++ IVG +++ L P F Y
Sbjct: 160 FKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG 219
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
K ++ K A +F ++ + + C ++K L K + +A I + + GI
Sbjct: 220 FVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI 276
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV-------------- 297
Y ++ LCK ++ +L +VE G P ++ + +
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336
Query: 298 ----ASQCG-----------------KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
S CG G+ E + + +++ KG D S+++ Y
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 396
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVAT----YDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ D +A I L + +A +++L++ + G M++A+ IF+ M+ ++
Sbjct: 397 T--ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 454
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +F V+S LC + L A+ + M+ +G P EA Y +I G
Sbjct: 455 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 501
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 160/410 (39%), Gaps = 38/410 (9%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ +M G P N L++A R + A ++ M G+ P+ T++ V L
Sbjct: 408 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 467
Query: 93 CRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR G+ + L ++D G+ S +Y +I G+ A + ++EM N PG
Sbjct: 468 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 527
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLLPKHFLSGND-------- 189
+SSI++ + + I+ +MV+ L+ + L GN
Sbjct: 528 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 587
Query: 190 -----------YVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
Y+ L D G+ A +F+ + ++ +L L +
Sbjct: 588 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 647
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R A +++H + E G TV Y + LC+ + +E LL + + +
Sbjct: 648 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 707
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+++ G+ +E +EL A+ GL+ + S ++ ++A L I +EK
Sbjct: 708 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 767
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
+ D + ++ L + +A + E + +S + +++ L
Sbjct: 768 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 817
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 33/321 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ +G +G ++ MM G P V N+L++ + A L AM
Sbjct: 531 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 590
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G+ PN + +Y ++D Y K G A
Sbjct: 591 SIGIEPNCY------------------------------IYGTLVDGYCKNGRIDDALTV 620
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+M + + + P YS IL G + +T + ++ M+E G V+
Sbjct: 621 FRDMLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYG--VVLGG 677
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L T A M+ ++ ++ T ++ A+ K GR +EA +++ IS G+
Sbjct: 678 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 737
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + L KE EE L V + G+ + L+ V K + + LS
Sbjct: 738 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 797
Query: 315 AVLDKGLLLDSFCCSSLMEYY 335
+ + L L++ S L +
Sbjct: 798 IIGENNLTLEASTISLLASLF 818
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 181/451 (40%), Gaps = 46/451 (10%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + R M +G V N L+++ N + A + +++ G P+ +++ + +
Sbjct: 94 LSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKG 153
Query: 92 LCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC G+ L L D I+ V+Y +I+ K G AA L M G N P
Sbjct: 154 LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKG-NCQP 212
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y +++ + + + + M+ K + P + + ++ L ++G+
Sbjct: 213 DVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPN--IVTCNSLVYALCNLGEWKHVNT 270
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVK----------------------------- 237
+ D KI + ++ AL KEG V
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHC 330
Query: 238 ------EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
EA++++ ++ +G Y +N CK + ++ L ++ + IP +
Sbjct: 331 LRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + C G+ ++ L ++ G + D L++Y C N +DKA+AL I
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKE 409
E D+ Y +++DG+ + G +E+A +F + K LK + ++ I+ LC
Sbjct: 451 EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK-PNVWTYNIMTHGLCKRGL 509
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
L +A K EM + D TY + GF+
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFL 540
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 157/361 (43%), Gaps = 8/361 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + R M P V L+ +L + + A L+ M+ G+SPN T + +
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVY 257
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVMYN-----LVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC G+++ V LL+ + S +M N V+D K+G A D ++ M +
Sbjct: 258 ALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQS-GVE 316
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY++++DG + + + ++ +MV K P F + +I + + A
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF--SYNTLINGYCKIERMDKAM 374
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F+ C +K+ T ++ L GR+++AI ++ + G Y ++ L
Sbjct: 375 YLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYL 434
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK ++ LL+ + P + + C G+ ++ +L S + KGL +
Sbjct: 435 CKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNV 494
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ + + C +D+A L +++++ S D TY+ + G ++ A+++ +
Sbjct: 495 WTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEE 554
Query: 386 M 386
M
Sbjct: 555 M 555
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 156/369 (42%), Gaps = 13/369 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ M G P + CN+L+ AL E + + L MV + PN + + V
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292
Query: 91 ILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC+ G +VV + SG+ V+ Y +ID + + + A + M + +
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH-KGCA 351
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P +Y+++++G + E+ + + + M +KL+P + +I L +G+ A
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTY--NTLIHGLCHVGRLQDAI 409
Query: 206 MIFKR--ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+F+ AC + +L T +L L K + +A+ + I + Y ++
Sbjct: 410 ALFREMVACGQIPDLV--TYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVID 467
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+C+ + E+ L ++ +G P + C +G E +L + +
Sbjct: 468 GMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSA 527
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG-RMEEAVRI 382
D +++ + + N + +AI L ++ S DV+T +L+ L DG EA ++
Sbjct: 528 DGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKL 587
Query: 383 FDYMKELKV 391
D L++
Sbjct: 588 EDMFPHLRI 596
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 8/278 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+ V+D +G+ +V MM G P V AL+D ++E+ A ++ M
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDF 128
V G +PN F+++ + C+ + + + L + I ++V YN +I G
Sbjct: 346 VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRL 405
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A EM + P TY +LD + + + ++ + L P +
Sbjct: 406 QDAIALFREMVACGQI-PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD--IQIY 462
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
VI + G+ A +F + ++ T M L K G + EA +++ + E
Sbjct: 463 TIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDE 522
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ Y + ++ LL +++ RG+
Sbjct: 523 NACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGF 560
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 179/413 (43%), Gaps = 9/413 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+Y+ M G P++ N L++ L ++ ++R A + + + +SP+ FT++ +
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 93 CRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR+ ++ G+ D + +SV Y+ +I+ +G A D L EM + + P
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE-KGIEPT 302
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+ + E E + +V M ++ P + +I LS +GK A +
Sbjct: 303 VYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN--VQTYTALISGLSRLGKLEVAIGL 360
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ + E + T ++ L GR A++I+H + G Y + LC
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E+ L +++ G +P + + + KG LL + + G D +
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ L+ + +++ A ++ + + + +Y L+DG KDG+++ A+ + M+
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E+ + S+ V++ L +A K D+M++ G P+ TY +I G
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 8/357 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G P V AL+ L R ++ +A LY M+++G+ PN T++ + LC G+
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 98 FEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
F L + + ++ YN +I GD A +M L P TY+
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYN 447
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + R++ LM E P + + ++ S GK +A F+
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY--NELVSGFSKWGKLESASFYFQEMV 505
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + + ++ SK+G+V A+ + + E G Y A +N L KE++
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + +VE+G +P + + + C G+ + ++ + + L + + SSL+
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
C + D+A L ++E+ + D T+ L+DG GR++ A + M ++
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 185/432 (42%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ +++ S KG + + + Y P V +L+ R + LA ++ M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDF 128
V++G PN T+S + LC G+ + L +L+ GI +V Y L I
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + M R P TY++++ G R K EV+ + M+++ L+P
Sbjct: 320 EEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY-- 376
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I +L G+ A IF T ++K L G +++A+ ++ + +
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y +N + LL + E G P + V+ GK +
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++ GL + ++L++ + + ++D A++L ++E++ + +V +Y+ +++
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K+ R EA +I D M E ++ + ++ ++ LC + A K +M K P
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 428 DEATYKQVISGF 439
+ TY +I G
Sbjct: 617 NLYTYSSLIYGL 628
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 185/414 (44%), Gaps = 19/414 (4%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA--QILC 93
R++R F PA ++ A + EIR A + +S F +SL + +L
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRV-----ADFLNEISGMGFGFSLYSCNTLLI 171
Query: 94 RSGKFEVVLG-------LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ KFE+V G +L+SGI S++ +N +I+ SKKG A L+++ +L+
Sbjct: 172 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-YDLS 230
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+S++ G R +++ + MV++ P +I L + G+ A
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST--LINGLCNEGRVDEAL 288
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + ++ IE T + AL +EAI++ + +RG Y A ++ L
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + E GL +++ G +P + + + C G++ ++ + G L ++
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ +++ C I+KA+ L K+ K+ V TY+ L++G G + A R+ D
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
MKE ++ +VS +L A EM++ G P+ +Y +I G
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 182/440 (41%), Gaps = 9/440 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D S S +++ ++G + L++ M G P V + AL
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVID 120
A L M + G PN T++ + L R GK EV +GL L G + ++V YN +I+
Sbjct: 322 AIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALIN 381
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G F A + M G TY+ I+ G E + + M++ L
Sbjct: 382 ELCVGGRFSTALKIFHWM-EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + +I G A + + E + T ++ SK G+++ A
Sbjct: 441 PT--VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + E G+ Y A ++ K+ + + LL+ + E G P + +
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+ ++ E E++ ++++GLL + ++L++ C N + A + +EK K ++
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
TY L+ GL ++G+ +EA + M+ + +F ++ L + A
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 678
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ MG KP+ TY ++ G
Sbjct: 679 MVDMGCKPNYRTYSVLLKGL 698
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 138/297 (46%), Gaps = 5/297 (1%)
Query: 147 GFSTYS--SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
GFS YS ++L ++E E + + M+ + P L+ N +I LS GK A
Sbjct: 160 GFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS-LLTFNT-LINILSKKGKVREA 217
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E+I + + T ++ + + A ++ + + G Y +N
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC E + +E +L +++E+G P + + + C +E EL++ + +G +
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++L+ +++ AI L+ K+ K + TY+ L++ L GR A++IF
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 385 YMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+M+ + ++ ++ ++ LC ++ KAM ++MLKMG P TY +I+G++
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 183/425 (43%), Gaps = 39/425 (9%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS--------------- 95
N L+DAL R+N + + + G M +DGV PN FT++L+ + LC++
Sbjct: 138 NHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMAT 197
Query: 96 --------------------GKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G+ + +L + + YN VI ++ F +
Sbjct: 198 KGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVV 257
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+M GR L P TY++I++ + + ++ I+ MV P ++ ++ L
Sbjct: 258 GDMV-GRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPN--VATFTALVGGL 314
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ G+ + A ++K E + +++ L G +K A + + + + G
Sbjct: 315 FNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNA 374
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y ++ K + + D+ G P + + V C K + + E L+
Sbjct: 375 RTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDK 434
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+L + ++ ++L+ C+ R++ +A+ + ++ + + TY+ LL GLF++G
Sbjct: 435 MLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGN 494
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+A+++ M+ + +S ++ VVS LC ++ R+AM M+ G +PD T+
Sbjct: 495 CGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTA 554
Query: 435 VISGF 439
+I +
Sbjct: 555 IIHAY 559
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/367 (18%), Positives = 145/367 (39%), Gaps = 31/367 (8%)
Query: 35 YRMMRVY---------GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
+RM V+ G P V +++A + E+R+A + MV G +PN T+
Sbjct: 248 FRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATF 307
Query: 86 SLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + L G+ L + + S+V YN++I GD A LN+M
Sbjct: 308 TALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDM-E 366
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
P TYS+++DG + + + I M P + ++M
Sbjct: 367 QHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPN---------VVVYTNMVG 417
Query: 201 TYAAEMIFKRACD-------EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ +++F +A E T ++++L RV A+ ++H + G
Sbjct: 418 VFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPP 477
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ L +E + ++ ++ G + + V+ C +E +
Sbjct: 478 NGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFV 537
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ +G+ D+F ++++ YC ++ A + + + ++ Y +L+ L
Sbjct: 538 GRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQ 597
Query: 374 GRMEEAV 380
++E+A+
Sbjct: 598 DKLEDAM 604
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 40/354 (11%)
Query: 26 GLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
GLF DG L++++ M G+ P+ + N L+ L +++ AS + M + G P
Sbjct: 313 GLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFP 372
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
N T Y+ +ID +SK GD A N+M
Sbjct: 373 NART------------------------------YSTLIDGFSKAGDLDGAISIWNDMTR 402
Query: 141 GRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P Y++++ ++ + I ++VE P + ++ N +I+ L +
Sbjct: 403 S-GCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN--CPPNTVTFNT-LIRSLCNCR 458
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A +F T +L L +EG +A+Q+ + GI + Y
Sbjct: 459 RVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYN 518
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
V+ LC+ E + ++ RG P A + + + C +G+ + +L A+
Sbjct: 519 TVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVV 578
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + LM C+ +++ A+ +K+ + T++VL+ G+F++
Sbjct: 579 NCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRN 632
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 184/413 (44%), Gaps = 14/413 (3%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
LE+ M+ GF + NA+L AL++ +E A + +++ G PN T+++
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 92 LCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC++G+ + ++L +++S + V+ Y+ +ID + K G A D M P
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV-HECIP 393
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
T+ ++L G ++K+ + R+ MV +P L + ++ + +A
Sbjct: 394 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG--LQTYNVLMDCVCGADSVESALE 451
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
I+ + +K + +T +++ L + RV EA + ++ + + +A V VLC
Sbjct: 452 IYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 511
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K+ + +E C +L +VVE G P V + KW+ +LL + G + D+
Sbjct: 512 KQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAA 568
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
S + C + D+A+ + I+ LKG D TY +L L R+E A+ F+
Sbjct: 569 TYSLCVAEICKAGKPDEAVEV-IEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEK 627
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
M ++ +++ C +A + + M+ G P T + + S
Sbjct: 628 MASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSS 680
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 159/375 (42%), Gaps = 25/375 (6%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFG 129
+ G N +T +++ ++ + E LL + + +MY VI+ + K G
Sbjct: 69 KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE--------VSDRIVGLMVEKKLLP 181
AF+ L+EM R + +S+++ G R + + + + ++ +
Sbjct: 129 QAFELLDEM-KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVV 187
Query: 182 KHFLSGN--DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
N D ++ DM K Y A C+ + + ++ AL K RV +A
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEA----SHGCEPDV----ISYSTVIDALCKAQRVDKA 239
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + G Y + ++ LCK +P E LL + E+G+ ++ + + +
Sbjct: 240 YEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHA 299
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
+ ++ + +L G + + + C ++D+A + +++ + K + D
Sbjct: 300 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPD 359
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
V TY ++DG K GRM++A +F M + + +F+ ++ K+ R+A + H+
Sbjct: 360 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 419
Query: 419 EMLKMGHKPDEATYK 433
+M+ G P TY
Sbjct: 420 DMVNAGFIPGLQTYN 434
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 176/404 (43%), Gaps = 16/404 (3%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK--- 97
+G P V + + ++DAL + + A + M G +PN T+S + LC+ +
Sbjct: 214 HGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSE 273
Query: 98 -FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYS 152
E++L + + G +++ +N ++ K + A F+RL + +G+ P TY+
Sbjct: 274 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL--LKSGKK--PNVVTYN 329
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+ G + + + + RI+ MVE K+ P + +I G+ A+ +F R
Sbjct: 330 VAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS--IIDGFCKAGRMDKADDVFTRMM 387
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T +L S+ + +EA +++ + G Y ++ +C E
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + + P + + C + E +E L + ++ + C +L+
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
E C ++D+A ++ + ++ T+ +L++ L+ + E A ++ V
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLL--RSPGFVA 565
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++++ + V+ +C + +A++ ++M+ G +PDE TY V+
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 154/404 (38%), Gaps = 75/404 (18%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF C LL+A + A L + PN+ ++ V C++G+ +
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 102 LGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LLD G+ V+ ++ +I +KG A ++ M G +P TY+++++
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM--GEECSPNVITYNTVVN 188
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + ++RI D ++ DM K Y A C+ +
Sbjct: 189 GLCK------ANRI------------------DEALELFDDMEKRYEA----SHGCEPDV 220
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ AL K RV +A + + + G Y + ++ LCK +P E
Sbjct: 221 ----ISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLE 276
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL + E+G+ G+ + F ++++
Sbjct: 277 LLLHMKEKGF---------------------------------GINIIDF--NAMLHALW 301
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
N + +KA ++ K +V TY+V + GL K GR++EA RI M E KV
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + KA M+ P T+ ++ GF
Sbjct: 362 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 405
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 114/297 (38%), Gaps = 28/297 (9%)
Query: 17 LVLDCYSHKGLFM-------------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+V +C H FM + V+ M GF+P + N L+D + + +
Sbjct: 387 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 446
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN-----LV 118
A +Y M R P+ T++ + Q LCR+ + + LD +V+ N +
Sbjct: 447 ESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 506
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
++ K+G+ A L+ + P T+ +++ +K E + +++
Sbjct: 507 VEVLCKQGEVDEACSVLDNVVE-VGCQPLGETFKILVEELYLRKKWEAASKLL------- 558
Query: 179 LLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
P Y + ++ GK A + ++ + + + T +L++L RV
Sbjct: 559 RSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
+ AI + ++ RG Y + C +E + +V G+ P A +
Sbjct: 619 ESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTM 675
>gi|297844018|ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335732|gb|EFH66149.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 210/515 (40%), Gaps = 113/515 (21%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I+S + S D ++ + G EV R GF +V A N + L
Sbjct: 137 LIRSYQACGSSLDVFDSLVRACTQNGDAQGAYEVIEQTRTEGFWVSVHALNNFMGCLLNL 196
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK-FE---VVLGLLDSGIYSSVM-Y 115
NEI +Y M G N T++LV C+ K FE V +L GI+ +V+ +
Sbjct: 197 NEIDWFWMVYKEMDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSF 256
Query: 116 NLVIDFYSKKGDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
N++ID K GD A L +M +G ++P TY+S+++G + + ++++RI G
Sbjct: 257 NMMIDGACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGE 316
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV+ G D C+E+ T G ++ A +
Sbjct: 317 MVKL---------GVD----------------------CNER------TYGALVDAYGRA 339
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER--------- 284
G EA+++ ++ +G+ Y + V L E E +LRD+V +
Sbjct: 340 GSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMVRKRMQIDGFTR 399
Query: 285 ----------GYIPCAMELSRFVASQ-------CGKG---------KWKEVEELLSAVLD 318
GY+ A+E R ++ + C K V+++L ++L
Sbjct: 400 AIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLV 459
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALH---IKIEKLKG------------------- 356
GL LD+ +L++ Y ++++AI ++ IK+ K
Sbjct: 460 HGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGA 519
Query: 357 ---------SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL---KVVSSSSFVIVVSRL 404
S D TY+ LL+G K G +EEA I M++ K VS ++ I+++ L
Sbjct: 520 AEAVVNAMESKDTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHL 579
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C KA + M++ G PD TY +I+ F
Sbjct: 580 CKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSF 614
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 119/324 (36%), Gaps = 49/324 (15%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D ++D Y G + L + M G V N+++ L+ + + A
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGA 380
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---------------------------- 98
+ MVR + + FT ++V + LCR+G
Sbjct: 381 MMVLRDMVRKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHH 440
Query: 99 -----------EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
+++ +L G+ ++++ +ID Y K+G A D + M N TP
Sbjct: 441 FVRDKKLVCVDQILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIK-MNKTP 499
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y+SI++G + ++ +V M K + + L I G A+
Sbjct: 500 NLVIYNSIVNGLSKRGMAGAAEAVVNAMESKDTVTYNTLLNGSLKI------GNVEEADN 553
Query: 207 IFKRACDEKIE--LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
I R + E + T ++ L K G ++A ++ ++ ERG+ Y +
Sbjct: 554 ILSRMQKQDGEKSVSLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITS 613
Query: 265 LCKEHQPEEVCGLLRDVVERGYIP 288
K EEV L ++ +G P
Sbjct: 614 FSKNRGQEEVVELHDYMILQGVTP 637
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 194/475 (40%), Gaps = 75/475 (15%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E + MR + P +CNALL L + L+ + M G+ + FT++++ L
Sbjct: 7 ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYL 66
Query: 93 CRSGKFEVV----------------------------LGLLDSGI------------YSS 112
C+ G E+ LGLLD I
Sbjct: 67 CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDV 126
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
+ YN +I+ + K AF+ L+EM L P TYS+ +D + K + +
Sbjct: 127 ITYNALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDA---FCKEGMLQEAIK 182
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
V+ + + L+ N++ L D G A + + I+L T +L
Sbjct: 183 FFVDMRRVA---LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L +EGR+KEA +++ + G+ Y A V+ K + E +L+++ E+ P
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + C + + +E + L+ + + G+ ++ ++LM+ Y + Q +A+ L
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359
Query: 349 IKIEKL----------------------KGSL-DVATYDVLLDGLFKDGRMEEAVRIFDY 385
++ L KG + D Y L+DG K G ++EA+ + D
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E+ + + ++ ++ L H +++KA DEM+ G PDE Y +I +
Sbjct: 420 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 474
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 171/413 (41%), Gaps = 56/413 (13%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ E M+ G P V + +DA ++ ++ A + M R
Sbjct: 132 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 191
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
++PN+FT++ + C++G L L L +GI + V Y ++D ++G A
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ M N + P TY++++ G + ++ E + I+ M EK + P L G
Sbjct: 252 EVFRAMLNA-GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT---- 306
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+L L E R++EA + I E GI
Sbjct: 307 ---------------------------------ILWGLCNESRLEEAKLLIGEIKESGIN 333
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ K Q E LL ++++ V C ++ ++L
Sbjct: 334 TNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFEVAKKL 381
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+LDKG++ D ++L++ + + +A+ L ++ ++ LD+ Y L+ GL
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 441
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
G++++A + D M V+ ++ ++ + L ++ +A++ +EM K G
Sbjct: 442 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 37/274 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +LD +G + EV+R M G P AL+ + E+ A + M
Sbjct: 235 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 294
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE---VVLG-LLDSGIYS-SVMYNLVIDFYSKKGDFGA 130
+ P+ + + LC + E +++G + +SGI + +V+Y ++D Y K G
Sbjct: 295 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 354
Query: 131 AFDRLNEMCN----------------------GRNLTPGFSTYSSILDGARRY----EKT 164
A L EM + + + P Y++++DG ++ E
Sbjct: 355 ALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 414
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ DR++ + +E L H + +I LS G+ A + + + +
Sbjct: 415 NLRDRMIEIGMELDL---HAYTA---LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYM 468
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
C++K G+V EA+++ + +++RG+ SD+
Sbjct: 469 CLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 502
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 179/419 (42%), Gaps = 19/419 (4%)
Query: 33 EVYRMMRVYGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++ RMM G V P V A + ++D +++ ++ A L+ MV+ G+ P+ T+S V
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + L + V+ YN +I YS G + A EM ++
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSIL 321
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQK-LSDMGKT 201
P T S ++ +Y K + + + M K P F + N Y + L DM
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTD- 380
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+F + I T ++KA + G + +A+ I++ + + G+ Y
Sbjct: 381 -----LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LC+ + ++ ++++G P + C G + +EL+S +++ G+
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD SS++ C ++ A + + Y +L+DG G+ME+A+R
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+FD M + + + +V+ C + + + + EML+ G KP Y +I G
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 181/432 (41%), Gaps = 34/432 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G++ + +++L+ Y+ KG +D +++ +M G P + N L+ A +
Sbjct: 353 KGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 412
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A ++ M GV P+ T+ V LCR GK + + + +++
Sbjct: 413 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-----------------EKFNQM 455
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D G A D+ C L GF T+ S+L + + I +M L F
Sbjct: 456 IDQGVAPDKYAYHC----LIQGFCTHGSLL---------KAKELISEIMNNGMHLDIVFF 502
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S +I L +G+ A+ IF + + ++ G++++A++++
Sbjct: 503 SS---IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ GI D Y VN CK + +E L R+++++G P + + + G+
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + + G+ ++ + ++ NR D+AI L ++ + +++ T +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++ G+F+ R+EEA +F + +V ++ I+++ L + +A M G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 425 HKPDEATYKQVI 436
+PD V+
Sbjct: 740 CEPDSRLLNHVV 751
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 163/371 (43%), Gaps = 46/371 (12%)
Query: 77 GVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG----IYSSVMYNLVIDFYSKKGDFG 129
G P+ F++S++ + LC +SG+ + +L ++ G V Y+ VID + K+GD
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A D EM R + P F TYSS++ + + ++ + MV K +LP ++ N
Sbjct: 237 KACDLFKEMVQ-RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN- 294
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I S G+ A +FK I T ++ +L K G++KEA ++ ++ +
Sbjct: 295 -LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G ++ + +++ +L GY KG ++
Sbjct: 354 G---QNPNVFSYTIML------------------NGY--------------ATKGCLVDM 378
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D + + L++ Y + +DKA+ + ++ DV TY ++
Sbjct: 379 TDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAA 438
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + G+M++A+ F+ M + V ++ ++ C L KA + E++ G D
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 429 EATYKQVISGF 439
+ +I+
Sbjct: 499 IVFFSSIINNL 509
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 151/383 (39%), Gaps = 73/383 (19%)
Query: 130 AAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKH 183
A F+R G R L+P TY+ ++D R + E++ G ++ L + H
Sbjct: 92 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANH 151
Query: 184 FLSGN----------DYVIQKLSDMG---KTYAAEMIFKRACDEKIELQDD--------- 221
L G D ++ + ++G ++ ++ K CD+ Q D
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 222 --TCGCMLKALS-------KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
C + A S KEG V +A ++ + +RGI Y + V+ LCK +
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LR +V +G +P + + G+WKE + + +L D S LM
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 333 EYYCSNRQIDKA------------------IALHIKIEKLKGSL---------------- 358
C +I +A + + KG L
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 359 -DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
D+ T++VL+ G +++A+ IF+ M++ V ++ V++ LC + ++ AM+
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
++M+ G PD+ Y +I GF
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGF 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 166/408 (40%), Gaps = 39/408 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++ Y++ G+ + ++ MR +G P V ++ AL R ++ A + M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDF 128
+ GV+P+K+ + + Q C G E++ ++++G++ V ++ +I+ K G
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG- 187
A + + N L P YS ++DG K E + R+ MV + P + G
Sbjct: 516 MDAQNIFDLTVN-VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 188 --NDY------------------------------VIQKLSDMGKTYAAEMIFKRACDEK 215
N Y +I L + G+T A++ F +
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I + T +L+ L K EAI ++ + + + + + + + EE
Sbjct: 635 IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L + G +PC + S + + +G +E E++ S++ + G DS + ++
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+I +A A KI++ SL+ T +L+D G E +R
Sbjct: 755 LKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 189/416 (45%), Gaps = 20/416 (4%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V ++ G VP V N L+ + EI A + R V+P+ T++ + + LC
Sbjct: 114 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLC 170
Query: 94 RSGKFEVVLGLLDSGI----YSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
SGK + + +LD + Y V+ Y ++I+ K+ G A L+EM N + P
Sbjct: 171 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN-KGSKPDV 229
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+ +++G + + + + + + M P + ++ +++ + G+ AE +
Sbjct: 230 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN--VITHNIILRSMCSTGRWMDAEKLL 287
Query: 209 ----KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ C + T ++ L ++G + AI I + G T Y ++
Sbjct: 288 SDMLRKGCSPSVV----TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 343
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CKE + + L +V RG P + + + + C GK E+L+ + KG
Sbjct: 344 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 403
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+++++ + ++AI L ++ + D+ TY L+ GL ++G+++EA++ F
Sbjct: 404 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 463
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ L + ++ ++ ++ LC ++ +A+ M+ KP EATY +I G
Sbjct: 464 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 177/456 (38%), Gaps = 115/456 (25%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
G DG + M G +P + C +L+ R + + K
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTK-----------------KA 111
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
TW V +IL +SG V + YN++I Y K G+ A L+ M N
Sbjct: 112 TW--VMEILEQSGAVPDV-----------ITYNVLISGYCKSGEIDNALQVLDRM----N 154
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+ P TY++IL + L D GK
Sbjct: 155 VAPDVVTYNTIL-------------------------------------RTLCDSGKLKQ 177
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A + R ++ T +++A KE V +A+++ + +G Y +N
Sbjct: 178 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 237
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL-- 321
+CKE + +E L ++ G P + + + S C G+W + E+LLS +L KG
Sbjct: 238 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297
Query: 322 ------LLDSFCC---------------------------SSLMEYYCSNRQIDKAIALH 348
+L +F C + L+ +C +++D+AI +
Sbjct: 298 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE-Y 356
Query: 349 IKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI----VVSR 403
+ I +G D+ TY+ LL L KDG+++ AV I + +L S +I V+
Sbjct: 357 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN---QLSSKGCSPVLITYNTVIDG 413
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L + + +A+K DEM + G KPD TY ++SG
Sbjct: 414 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 10/332 (3%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ + S+ D ++ ++++ +G + ++ M YG P V N +L ++
Sbjct: 216 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 275
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSV 113
A L M+R G SP+ T++++ LCR G + +L+ +S+
Sbjct: 276 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 335
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++ + K+ A + L+ M + R P TY+++L + K +V+ I+
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ K P L + VI LS +GKT A + + ++ T ++ LS+E
Sbjct: 395 LSSKGCSP--VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 452
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V EAI+ +H + GI Y + + LCK Q + L ++ + P
Sbjct: 453 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 512
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + +G KE +LL+ + +GL+ S
Sbjct: 513 TILIEGIAYEGLAKEALDLLNELCSRGLVKKS 544
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ +GL +++ M ++G P + N LL ++ ++ A M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIYSSVM--YNLVIDFYSKKGDF 128
V G P+ T++ + LC+ GK +V +L L S S V+ YN VID SK G
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+EM + L P TYSS++ G R K + + + + + P + ++ N
Sbjct: 421 ERAIKLLDEM-RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP-NAITYN 478
Query: 189 DYVI----QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
++ + +D + A MI KR + + T +++ ++ EG KEA+ + +
Sbjct: 479 SIMLGLCKSRQTDRAIDFLAYMISKRC-----KPTEATYTILIEGIAYEGLAKEALDLLN 533
Query: 245 LISERGITVRDS 256
+ RG+ + S
Sbjct: 534 ELCSRGLVKKSS 545
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 181/407 (44%), Gaps = 35/407 (8%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A N ++D+L + ++ A L+ MV G+SP+ FT++ + LC +++ V L
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 105 LDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + S +M +N V+D K+G A D +++M R + P TY++++DG
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ-RGVEPNVVTYTALMDGHC 317
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV-----IQKLSDMGKTYAAEMIFKRACDE 214
+ + + ++ MV K +P + +S N + IQ++ D Y
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMP-NVISYNTLINGYCKIQRI-DKAIHYTX---------- 365
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
L D C C L + EA++++ + +G Y +N CK + ++
Sbjct: 366 ---LMDXXC-CYLN-------MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 414
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ + IP + S + C + ++ L ++ + + L++Y
Sbjct: 415 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
C NR + +A+AL IE D+ ++ +DG+ + G +E A +F + +
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 534
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ I+++ LC L +A K EM + G + Y + GF+
Sbjct: 535 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 581
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 178/430 (41%), Gaps = 66/430 (15%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
RM+R+ P+ N LL ++ + L M G+ PN +T ++ C
Sbjct: 51 RMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHL 109
Query: 96 GK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+ F V+ +L G + + +I +G G A ++M G P T
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI-GEGFRPDVVT 168
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y ++++G + T + R++G MV+K P F
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT---------------------- 206
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++ +L K+ +V EA ++ + +GI+ Y + ++ LC +
Sbjct: 207 ---------------IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ V LL ++V+ +P + + V + C +GK E +++ ++ +G+ + ++
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGR-------------- 375
LM+ +C ++D+A+ + KG + +V +Y+ L++G K R
Sbjct: 312 LMDGHCLLSEMDEAVKV-FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXX 370
Query: 376 -----MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
M+EAV++FD M + + S+ +++ C ++ + KAM EM + PD
Sbjct: 371 CCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 430
Query: 430 ATYKQVISGF 439
TY +I G
Sbjct: 431 VTYSTLIHGL 440
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 112/289 (38%), Gaps = 43/289 (14%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ ++V+ M G +P V + N L++ + I A L+G M R + P+ T+S +
Sbjct: 378 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 437
Query: 90 QILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC + + + L S I + V Y +++D+ K A L + G NL
Sbjct: 438 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI-EGSNL 496
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P + +DG R + E + + + K L P + TY+
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW----------------TYSI 540
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M+ L + G + EA +++ + E G T+ Y
Sbjct: 541 ---------------------MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 579
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ ++ LL+++V RG+ A ++ FV G + ++++L
Sbjct: 580 FLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 628
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/468 (19%), Positives = 192/468 (41%), Gaps = 42/468 (8%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
S L++ Y +G+ + + M + GF P+V CN ++ ++ + L
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYS 123
+ M+ V PN +++++ +LC GK + + +L + + + V YN ++ +
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 124 KKGDFGAAFDRLNEM-CNG----------------RN-----------------LTPGFS 149
KKG F A ++ M C G RN +TP
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+Y+++++G + K V+ R+ M+E L P L + +I G A +
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPN--LITYNILINGYCINGNFEEALRLLD 339
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
+ + T G +L L K + A I S ++ + ++ LC+
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNG 399
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+E LL ++ + G P + S + C G + +E++S + +G + ++ S
Sbjct: 400 LLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFS 459
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ C + + + + + + D T + L+ L ++G++ EA ++ +
Sbjct: 460 TLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI 519
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+V +S +F +++ ++ + A D+M+ GH P TY ++
Sbjct: 520 GLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLL 567
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 186/457 (40%), Gaps = 44/457 (9%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + + MM G+VP + + N LL ++ + A L M G+ + T
Sbjct: 188 QGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCT 247
Query: 85 WSLVAQILCR---SGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+++ LCR S + +VL + + + + V YN +I+ + K+G G A NEM
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI 307
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
NL+P TY+ +++G E + R++ +M + P G ++ L
Sbjct: 308 E-LNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGT--LLNGLYKSA 364
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K A I +R + L + M+ L + G + EA Q+ + + G+ +
Sbjct: 365 KFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFS 424
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N CK + ++ + G++P + S + + C G E + +A+
Sbjct: 425 VLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLN 484
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G D+F C+SL+ C N ++ +A I ++ + T+D +++G G A
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544
Query: 380 VRIFDYM-----------------------------KELK-------VVSSSSFVIVVSR 403
+FD M K LK V + S+ ++
Sbjct: 545 FSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ L +A++ +EM++ PD TY ++SG +
Sbjct: 605 ISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/478 (18%), Positives = 185/478 (38%), Gaps = 47/478 (9%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C+G + ++ +D G V + MR P + N L++ ++ +I
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD------------------ 106
+A+ ++ M+ +SPN T++++ C +G FE L LLD
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLL 357
Query: 107 SGIYSS----------------------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+G+Y S + + ++ID + G AF L EMC +
Sbjct: 358 NGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKD-GV 416
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+S +++G + + ++ + + +P + + +I +G Y
Sbjct: 417 YPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST--LIYNSCKVGNVYEG 474
Query: 205 EMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
M F A + + D+ TC ++ +L + G++ EA + H IS G+ + +N
Sbjct: 475 -MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIIN 533
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ ++ G+ P + C + E +LL + L +
Sbjct: 534 GYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV 593
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D+ ++L+ + + +A+ L ++ + D TY +L GL ++GR+ A
Sbjct: 594 DTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFL 653
Query: 384 DYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ KE+ ++S + + L + + A+ EM + G D + G+
Sbjct: 654 GRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGY 711
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 184/447 (41%), Gaps = 22/447 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G+++ + + ++ G ++ E + G VP + +++ +
Sbjct: 484 NGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSG 543
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVID 120
A ++ M+ G P+ FT+ + ++LC+ F LL ++ YN +I
Sbjct: 544 AFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIV 603
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
SK G+ A EM N+ P TY+ IL G R + + +G +++K++L
Sbjct: 604 EISKSGNLLEAVRLFEEMIQN-NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEIL 662
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ + + I L G++ AA +FK ++ + L + S+ G+V A
Sbjct: 663 TLNSIVYTCF-IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSAS 721
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEH---QPEEVCGLLRDVVER-GYIPCAMELSRF 296
+ + + + + N+L + Q C L +++ R G+ P +
Sbjct: 722 SLISKTRNKNVIPNLTTF----NILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSL 777
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C G + ++L + + +D + L+ C +DK I L +E +
Sbjct: 778 ILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRV 837
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK----VVSSSSFVIVVSRLCHLKELRK 412
SLD T + D L + RM F +M E+ + +S + ++ R+C + +++
Sbjct: 838 SLDKDTQKAVTDVLVR--RMVSQ-NYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQG 894
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A K D+M+ +G D+A ++ G
Sbjct: 895 AFKLKDQMVALGISLDDAAECAMVRGL 921
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
TC ++ ++ K R + + + S + ++VLC + + ++ +L +
Sbjct: 142 TCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMM 201
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
GY+P + + ++ C KG++K L+ + KG+ D + ++ C N +
Sbjct: 202 ERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRS 261
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
+ + K+ + + +Y+ L++G K+G++ A R+F+ M EL + + ++ I+
Sbjct: 262 AQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNIL 321
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C +A++ D M +P+E T +++G
Sbjct: 322 INGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGL 360
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 142/363 (39%), Gaps = 45/363 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
AL+ + D YS G + R +P ++ N LL R +I LY M
Sbjct: 703 ALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLM 762
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
R G PN+ T+ + LC G E+ + +L +S + +N++I + D
Sbjct: 763 RRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDL 822
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
D LT + LD + + V+D +V MV + +F+ +
Sbjct: 823 DKVID----------LTHNMEVFRVSLD---KDTQKAVTDVLVRRMVSQN----YFVFMH 865
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ + + K Y M KR C + G ++ A ++ +
Sbjct: 866 EMLKKGFIPTSKQYCTMM--KRMC-------------------RVGDIQGAFKLKDQMVA 904
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI++ D+ A V L + EE +L+ ++ IP + + C K +KE
Sbjct: 905 LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLL 367
L + + LD + L+ C+N + A+ + +I++ KG L ++ TY VL+
Sbjct: 965 AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQ-KGLLPNMTTYRVLV 1023
Query: 368 DGL 370
+
Sbjct: 1024 SAI 1026
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 176/399 (44%), Gaps = 9/399 (2%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVL 102
V A +++ L R+ ++ A L+ AM+ G SP+ T+S + L ++ +V
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 266
Query: 103 GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
++ +G+ +MY ++ Y G A +MC + P TY++++D +
Sbjct: 267 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCR-HGVEPDVVTYTALMDYLCKN 325
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
K+ + +I +V++ P G ++ + G + + ++L
Sbjct: 326 GKSTEARKIFDSLVKRGHKPDSTTYGT--LLHGYATEGALVEMHDLLDLMMKKGMQLGHH 383
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
++ A +K +V EA+ ++ + ++G+ +Y +++LC + ++ +
Sbjct: 384 IFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 443
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P + + + C KW +VEEL ++D+G+ LD+ +++M C ++
Sbjct: 444 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 503
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+A L + ++ + TY+ L+DG DG+M+EA+++ M V S ++ +
Sbjct: 504 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 563
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + + EM G P TY+ ++ G
Sbjct: 564 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 602
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 156/406 (38%), Gaps = 81/406 (19%)
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL-------DSGIYSSVMYNLVIDFYSKKGDFG 129
G P+ F+++++ + LC + L LL V Y VI+ ++G
Sbjct: 165 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 224
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A+ + M + R +P TYSSI+ + + + + ++ MV+ ++P
Sbjct: 225 KAYSLFDAMLD-RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD------- 276
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
C L C G+ KEAI I+ +
Sbjct: 277 ----------------------CIMYTSLVHGYC--------SSGKPKEAIGIFKKMCRH 306
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y A ++ LCK + E + +V+RG+ P + + +G E+
Sbjct: 307 GVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEM 366
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+LL ++ KG+ L + +M Y + ++D+A+ + + + + D+ Y +LD
Sbjct: 367 HDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDI 426
Query: 370 LFKDGRMEEAVRIFDYMK----------------------------ELKV--------VS 393
L GR+++A+ F+ +K EL +
Sbjct: 427 LCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLD 486
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F ++ LC + +A D M+++G +P+ TY +I G+
Sbjct: 487 TIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 532
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 179/423 (42%), Gaps = 51/423 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V++ +G ++ M G P V ++++ AL + + A+ ++ M
Sbjct: 209 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 268
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF 128
V++GV P+ ++ + C SGK + +G+ G+ V+ Y ++D+ K G
Sbjct: 269 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 328
Query: 129 GAA---FDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A FD L + R P +TY ++L G A E+ D ++ LM++K + H
Sbjct: 329 TEARKIFDSLVK----RGHKPDSTTYGTLLHGYATEGALVEMHD-LLDLMMKKGMQLGHH 383
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + ++ + K A ++F + + G +L L GRV +A+ ++
Sbjct: 384 IF--NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 441
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ + ++ LC + ++V L ++++RG + + + + C KG
Sbjct: 442 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 501
Query: 305 KWKEVEELLSAVLDKGL---------LLDSFCC--------------------------S 329
+ E + L ++ G+ L+D +C +
Sbjct: 502 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 561
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+++ Y N +I+ + L +++ + + TY++LL GLF+ GR A ++ M +
Sbjct: 562 TIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKW 621
Query: 390 KVV 392
V
Sbjct: 622 DTV 624
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 136/311 (43%), Gaps = 40/311 (12%)
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F+R+ + P +TY ++ RR + +++ VG ++ L L +
Sbjct: 84 FNRMPR-AGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP--L 140
Query: 192 IQKLSDMGKTY-AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE-R 249
++ L D +T A +++ +R + + + +LK L + ++A+ + H++++ +
Sbjct: 141 LKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK 200
Query: 250 GITVRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G D Y +N L +E Q ++ L +++RG P + S +++ +
Sbjct: 201 GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDK 260
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ + ++ G++ D +SL+ YCS+ + +AI + K+ + DV TY L+D
Sbjct: 261 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 320
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K+G+ EA +IFD ++K GHKPD
Sbjct: 321 YLCKNGKSTEARKIFD----------------------------------SLVKRGHKPD 346
Query: 429 EATYKQVISGF 439
TY ++ G+
Sbjct: 347 STTYGTLLHGY 357
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 195/453 (43%), Gaps = 22/453 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G +DA +++ Y GL +E + MR + P V N +LD L ++N + LA
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
+Y M++ PN T+S++ LC+SG + L L D ++ Y +VI
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ A+ RL + + P F T +++L+G ++ + + ++ L + +
Sbjct: 241 LCRSKRVDDAY-RLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVL 299
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ G +I+ L + ++++++ ++ ++ M+K L++ G+V++A++
Sbjct: 300 D--VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALE 357
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + ++E G+ Y + C E L ++ P S ++ C
Sbjct: 358 LLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMC 417
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS---- 357
G ++ +E+ + + G + +SL++ C Q++KA L K+E +
Sbjct: 418 RNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFL 477
Query: 358 ---------LDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHL 407
LD A+ +++ L G + +A RI + + ++ I+V+ C L
Sbjct: 478 RLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKL 537
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
A K EM G PD TY +I+G +
Sbjct: 538 GNFNGAYKLFREMQFKGLSPDTVTYGTLINGLL 570
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 161/374 (43%), Gaps = 9/374 (2%)
Query: 46 AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVV 101
A +C+ + D L QN + L A+ G+ + + ++ ++ + G E
Sbjct: 90 AWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETF 149
Query: 102 LGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
+ D V YN+++D +K A M N P +T+S ++DG +
Sbjct: 150 GSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMK-LNCLPNVATFSILIDGLCK 208
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ + + M ++ +LP F VI L + A +F + D +
Sbjct: 209 SGNVKDALHLFDEMTQRGILPDAFTYC--VVISGLCRSKRVDDAYRLFDKMKDSGVGPDF 266
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
TC +L RV EA + L + G + Y + L + + E+V L R
Sbjct: 267 VTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRK 326
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++E P + + GK ++ ELL+ + + G++ D+ C + L++ +C
Sbjct: 327 MIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGL 386
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
+ +A +L ++I + +V TY +L+ G+ ++G +A IF+ M++L S+ +F
Sbjct: 387 LSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNS 446
Query: 400 VVSRLCHLKELRKA 413
++ LC +L KA
Sbjct: 447 LIDGLCKTGQLEKA 460
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 159/418 (38%), Gaps = 56/418 (13%)
Query: 33 EVYRMMRVY---GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
E + ++R++ G+V V + L+ L+R LY M+ D V P+ + ++++
Sbjct: 284 EAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMM 343
Query: 90 QILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ L +GK L LL+ SG+ +V YN++I + G A L + +
Sbjct: 344 KGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEA-RSLQLEISRHDC 402
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLM------------------------VEKKLL 180
P TYS ++ G R T + I M +EK L
Sbjct: 403 FPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHL 462
Query: 181 --------------------PKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIEL 218
P H L ++++L D G + A I + D
Sbjct: 463 LFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAP 522
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ K G A +++ + +G++ Y +N L + + E+ +
Sbjct: 523 GIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVF 582
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ + G P A + C + + L L + + +E Y
Sbjct: 583 DQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL-RNIRSQEDEAIKAIEGYFEK 641
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
++++KA+ ++++ D+ Y + L GL + R+ EA++IF ++E KVV +
Sbjct: 642 QEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPP 699
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 186/433 (42%), Gaps = 36/433 (8%)
Query: 19 LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
++CY + ++R M + G + N L++ + + L+ ++ +++ G
Sbjct: 73 INCYH------TAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGY 126
Query: 79 SPN-------------KFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVID 120
PN K ++ + LC+ G+ L LL D + VMYN +ID
Sbjct: 127 DPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIID 186
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K AFD +EM + ++P TYS+++ G K + + + M+ + +
Sbjct: 187 SMCKVKLVNEAFDLYSEMVS-EGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIK 245
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ GK + +F + I+ T ++ +V +A
Sbjct: 246 PDVYTF--NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
I++ +++ G+ Y +N CK + +E L + + + IP + + +
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGL 363
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK------- 353
C GK +L+ + D+G+ D SS+++ C N Q+DKAIAL K++
Sbjct: 364 CKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLF 423
Query: 354 LKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELR 411
+KG +LDV Y V++ G G EA+ + M++ ++ + ++ I++ L E
Sbjct: 424 VKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDEND 483
Query: 412 KAMKNHDEMLKMG 424
A K EM+ G
Sbjct: 484 MAEKLLREMIARG 496
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L +G+ AA + +R + ++ ++ ++ K V EA +Y + G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I+ Y A ++ + ++ L ++ P + V C GK KE +
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ + ++ +G+ + SLM+ YC +Q++KA ++ + + + D +Y+++++G
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K +++EA+ +F M ++ + ++ ++ LC ++ A+K DEM G PD
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388
Query: 430 ATYKQVISGF 439
TY ++
Sbjct: 389 ITYSSILDAL 398
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 136/335 (40%), Gaps = 43/335 (12%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ +G+ Q + + + ++D L + ++Y M G P V +AL+ +
Sbjct: 165 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFF 224
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 118
+++ A L+ M+ + + P+ +T++++ C+ GK
Sbjct: 225 IVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM-------------------- 264
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
K+G A M + + P TY S++DG ++ ++ I M +
Sbjct: 265 -----KEGKTVFA------MMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P + +I + K A +FK+ + I T ++ L K G++
Sbjct: 314 VNPDT--QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISY 371
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL--------RDVVERGYIPCA 290
A+++ + +RG+ Y + ++ LCK HQ ++ LL D+ +GY
Sbjct: 372 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDV 431
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + C KG + E LLS + D G + D+
Sbjct: 432 YAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDA 466
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 8/211 (3%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K+G I + LI +G+ ++ S Y +N LCK Q LLR V + P +
Sbjct: 123 KKGYDPNVITLTTLI--KGLCLKVS-YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVV 179
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK- 350
+ + S C E +L S ++ +G+ D S+L+ + ++ AI L K
Sbjct: 180 MYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 239
Query: 351 -IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
+E +K DV T+++L+DG KDG+M+E +F M + + + ++ ++ C +K
Sbjct: 240 ILENIKP--DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ KA + M + G PD +Y +I+GF
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 39/281 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D + G +G V+ MM G P V +L+D ++ A+ ++ M
Sbjct: 250 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTM 309
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDF 128
+ GV+P+ +++++ C+ K + + L + I + V Y +ID K G
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--LLPKHFLS 186
A ++EM + R + P TYSSILD + + D+ + L+ + K + F+
Sbjct: 370 SYALKLVDEM-HDRGVPPDIITYSSILDALCKNHQV---DKAIALLTKLKDQVFEDLFVK 425
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
G + + + M + + + +F A +L + GR+ +A
Sbjct: 426 GYNLDVYAYTVMIQGFCVKGLFNEAL------------ALLSKMEDNGRIPDA------- 466
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
Y + L K+ + + LLR+++ RG +
Sbjct: 467 ---------KTYEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G +L +L K AI ++ + +GI +N + Q + ++++
Sbjct: 64 GKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILK 123
Query: 284 RGYIPCAMELSRFVASQCGK-------------GKWKEVEELLSAVLDKGLLLDSFCCSS 330
+GY P + L+ + C K G+ + +LL V K + + ++
Sbjct: 124 KGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNT 183
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+++ C + +++A L+ ++ S DV TY L+ G F G++++A+ +F+ M
Sbjct: 184 IIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN 243
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +F I+V C ++++ M+K G KP+ TY ++ G+
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 189/440 (42%), Gaps = 54/440 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EV 100
P V N ++DA +R ++ A L +MV G+ P T++ V + L R+G++ EV
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251
Query: 101 VLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ G+ V +N++I + + G+ A EM GR +TP ++S ++
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFT 310
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK-RACDEKIE- 217
R + + + + M E L+P D VI + G A M+ R DE +
Sbjct: 311 RRGEMDHAAEYLREMREFGLMP-------DGVIYTMVIGGFCRAGLMLEALRVRDEMVAF 363
Query: 218 --LQDD-TCGCMLKALSKEGRVKEAIQIYHLISERGITV-------------RDSD---- 257
L D T +L L KE R+ +A ++ + + ERG+ RD +
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
Query: 258 ------------------YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
Y ++ +C++ + L D+ R P + S + S
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C KG+ L +++KG++ + +S+++ YC + + K K+ K D
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
+ TY+ L+ G K+G+M EA + M+ V + ++ +++S +++A +
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603
Query: 419 EMLKMGHKPDEATYKQVISG 438
+M G +PD TY +I+G
Sbjct: 604 KMGARGIEPDRYTYMSMING 623
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 177/420 (42%), Gaps = 22/420 (5%)
Query: 25 KGLFMDGL-----EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL +G EV+R M G P V + N L+ R E+ A Y M V+
Sbjct: 237 KGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVT 296
Query: 80 PNKFTWSLVAQILCRSGKFEVV---------LGLLDSGIYSSVMYNLVIDFYSKKGDFGA 130
P+ ++S + + R G+ + GL+ G V+Y +VI + + G
Sbjct: 297 PDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG----VIYTMVIGGFCRAGLMLE 352
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +EM P TY+++L+G + + ++ ++ M E+ + P L
Sbjct: 353 ALRVRDEMV-AFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD--LCTFTT 409
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I G A F D+++ T ++ + ++G + +A +++ + R
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y ++ C++ Q + L ++V +G +P M + + C G + +
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQ 529
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ L + ++ D ++L+ Y ++ +A L +E D TY++++ G
Sbjct: 530 QFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G M+EA ++ M + +++ +++ +K+ + HDEML+ G PD+
Sbjct: 590 SVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 194/436 (44%), Gaps = 9/436 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
Q L++ Y+ + E +R++ + +A NALL AL R L +
Sbjct: 87 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRS---GKFEVVLGLLDSG-IYSSVM-YNLVIDFYSK 124
Y ++ N +T +++ C++ G+ + V+ ++ ++ V+ +N+++D +
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
GD AA ++ M + + + PG TY+S+L G R + + + + M + P
Sbjct: 207 AGDVEAAMALIDSMVS-KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD-- 263
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ + +I G+ A +K ++ + C++ ++ G + A +
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ E G+ Y + C+ E + ++V G +P + + + C +
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ + EELL+ + ++G+ D ++L+ YC + I+KA+ I + D+ TY+
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+DG+ + G + +A ++D M ++ + ++ I++ C ++ A DEM+
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503
Query: 424 GHKPDEATYKQVISGF 439
G P+ TY +I G+
Sbjct: 504 GIVPNIMTYNSIIKGY 519
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++ Y G L+ + + P + N L+D + RQ ++ A+ L+ M
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF 128
+ PN T+S++ C G+ + LD GI ++M YN +I Y + G+
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
L +M + + + P TY++++ G + K + ++ +M + + P
Sbjct: 526 SKGQQFLPKMRHDK-VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTY-- 582
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I S G A+ ++K+ IE T M+ G K++ Q++ + +
Sbjct: 583 NMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642
Query: 249 RGITVRD 255
+G+ D
Sbjct: 643 KGLAPDD 649
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 177/433 (40%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P + N L+ L + +I A L+
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G P+ T+ + LC+ G + LL S + + + YN +ID K
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ +EM + ++P TY+S++ + + ++ MV K++P +
Sbjct: 307 TEAFNLFSEMIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L G A + +E T ++ + EA++++ +
Sbjct: 366 --VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N C+ + ++ GLL + +G I + + + C G+ +
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ G + D L++Y C N + +A+ L IE D+ Y++ +D
Sbjct: 484 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 543
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A +F + + ++ I++ LC L +A K +M + G
Sbjct: 544 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSR 603
Query: 428 DEATYKQVISGFM 440
D Y +I GF+
Sbjct: 604 DGCIYNTIIRGFL 616
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 153/347 (44%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A N ++D+L + ++ A L+ M+ G+SP+ FT++ + LC +++ V L
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347
Query: 105 LDSGIYSSVMYNLVI-----DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + S +M N+V+ D K+G A D ++ M R + P TY++++DG
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK-RGVEPDVVTYTALMDGHC 406
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++ MV K +P + + +I + + A + ++ + +
Sbjct: 407 LRSEMDEAVKVFDTMVHKGCVPN--VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 464
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L GR++ AI ++H + G Y ++ LCK H E LL+
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + + + C G+ + +L S + KGL D + ++ C
Sbjct: 525 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 584
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+D+A L K+++ S D Y+ ++ G + A ++ M
Sbjct: 585 LLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEM 631
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 182/442 (41%), Gaps = 47/442 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + ++ YS G++ + + V++ M G +P V CN+ + AL++ A
Sbjct: 290 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 349
Query: 67 SCLYGAMVRDGVSPNKFTWSLV------AQILCRSGKFEVVLGLLDSGIYSSV-MYNLVI 119
C++ +MV G P+ ++S + A C + + +L GI + ++N++I
Sbjct: 350 KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILI 409
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ Y++ G A +M N + + P T+++
Sbjct: 410 NAYARCGMMDKAMLIFEDMQN-KGMIPDTVTFAT-------------------------- 442
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
VI L +G+ A F D + + GC+++ G + +A
Sbjct: 443 -----------VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 491
Query: 240 IQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
++ + + I Y+ + +N LCKE + E ++ +V+ G P + + +
Sbjct: 492 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 551
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G +E LL A+ G+ + + +L++ YC N +ID A+ + +
Sbjct: 552 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 611
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNH 417
Y ++L GLF+ R A ++F M E VS ++ +V+ LC +A
Sbjct: 612 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 671
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+++ M K D T+ VIS
Sbjct: 672 EKLFAMNVKFDIITFNIVISAM 693
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 195/442 (44%), Gaps = 47/442 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G +P + CN+++ L + E+ A + MV G++P+ FT+SL+ LC+S +
Sbjct: 220 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 279
Query: 100 --VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEM-----------CNG---- 141
V+ ++++G +S+ YN +I YS G + + +M CN
Sbjct: 280 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 339
Query: 142 -------------------RNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLL 180
+ P +YS++L G + ++D I LM+ K +
Sbjct: 340 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 399
Query: 181 P-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P KH + +I + G A +IF+ ++ + T ++ +L + GR+ +A
Sbjct: 400 PNKHVF---NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-LSRFVA 298
+ ++ + + G+ ++ Y + C + + L+ +++ + P ++ S +
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 516
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C +G+ E ++++ ++ G + +SLME YC +++A AL + +
Sbjct: 517 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 576
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNH 417
+ Y L+DG K+GR+++A+ +F M V +S + I++ L + A K
Sbjct: 577 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 636
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM++ G TY V+ G
Sbjct: 637 HEMIESGTTVSIHTYGVVLGGL 658
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/407 (18%), Positives = 171/407 (42%), Gaps = 19/407 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P + N L+D R + L + G ++++G+ P+ F++SL+ + + G+ + +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 212
Query: 101 VLGLLDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L +++ G+ ++ N +I K + A + +M + + P TYS I+DG
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLIIDGLC 271
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++R++ MVE P + +I S G + +FK+ +
Sbjct: 272 KSKAMDKAERVLEQMVEAGTRPNSITY--NSLIHGYSISGMWNESVRVFKQMSSCGVIPT 329
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC---- 275
D C + AL K GR EA I+ + +G D ++ +L + C
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADV 386
Query: 276 -GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ ++ +G P + + + G + + + +KG++ D+ ++++
Sbjct: 387 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 446
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVV 392
C ++D A+ + + A Y L+ G G + +A + M K++
Sbjct: 447 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 506
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F +++ LC + + D M++ G +P+ T+ ++ G+
Sbjct: 507 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 553
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 144/347 (41%), Gaps = 45/347 (12%)
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F R++ R+ P TY+ ++D RR + ++ IVG +++ L P F Y
Sbjct: 140 FKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG 199
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
K ++ K A +F ++ + + C ++K L K + +A I + + GI
Sbjct: 200 FVKDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI 256
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV-------------- 297
Y ++ LCK ++ +L +VE G P ++ + +
Sbjct: 257 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 316
Query: 298 ----ASQCG-----------------KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
S CG G+ E + + +++ KG D S+++ Y
Sbjct: 317 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 376
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVAT----YDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ D +A I L + +A +++L++ + G M++A+ IF+ M+ ++
Sbjct: 377 T--ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 434
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +F V+S LC + L A+ + M+ +G P EA Y +I G
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 481
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 160/410 (39%), Gaps = 38/410 (9%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ +M G P N L++A R + A ++ M G+ P+ T++ V L
Sbjct: 388 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 447
Query: 93 CRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR G+ + L ++D G+ S +Y +I G+ A + ++EM N PG
Sbjct: 448 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 507
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLLPKHFLSGND-------- 189
+SSI++ + + I+ +MV+ L+ + L GN
Sbjct: 508 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 567
Query: 190 -----------YVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
Y+ L D G+ A +F+ + ++ +L L +
Sbjct: 568 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 627
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R A +++H + E G TV Y + LC+ + +E LL + + +
Sbjct: 628 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 687
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+++ G+ +E +EL A+ GL+ + S ++ ++A L I +EK
Sbjct: 688 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 747
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
+ D + ++ L + +A + E + +S + +++ L
Sbjct: 748 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 797
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 33/321 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ +G +G ++ MM G P V N+L++ + A L AM
Sbjct: 511 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 570
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G+ PN + +Y ++D Y K G A
Sbjct: 571 SIGIEPNCY------------------------------IYGTLVDGYCKNGRIDDALTV 600
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+M + + + P YS IL G + +T + ++ M+E G V+
Sbjct: 601 FRDMLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYG--VVLGG 657
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L T A M+ ++ ++ T ++ A+ K GR +EA +++ IS G+
Sbjct: 658 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 717
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + L KE EE L V + G+ + L+ V K + + LS
Sbjct: 718 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 777
Query: 315 AVLDKGLLLDSFCCSSLMEYY 335
+ + L L++ S L +
Sbjct: 778 IIGENNLTLEASTISLLASLF 798
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 184/394 (46%), Gaps = 10/394 (2%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----- 106
A+ A+ QN +++ +M + GV PN F ++++ LCR + + D
Sbjct: 182 AIQAAVKLQN-LKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNI 240
Query: 107 SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
+ + S V YN +ID Y K G+ AAF ++ E +++ P T++S+L G + K +
Sbjct: 241 NLVGSIVTYNTLIDGYCKVGELDAAF-KMRERMKEKSVAPNIITFNSLLSGLCKMRKMKE 299
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ ++ M +P + + L A ++++A ++ I + + T +
Sbjct: 300 ARSLLKEMEVNGFMPDGYTYS--ILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSIL 357
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L L K+G+V++A +I +E G+ + Y FVN C+ + + + G
Sbjct: 358 LNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGL 417
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P ++ + + C + + EE + + +KG+ ++L++ Y D+
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQ 477
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-VRIFDYMKELKVVSSSSFVIVVSRLC 405
+ ++E++ +V +Y L++ L KDG++ EA + + D + + ++ + +++ C
Sbjct: 478 ILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSC 537
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +++ A++ DEM++ P TY +I G
Sbjct: 538 MVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGL 571
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 181/418 (43%), Gaps = 32/418 (7%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V GF+P + L D L R ++ A LY G+ N +T S++ LC+ GK
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366
Query: 98 FE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E ++ ++G+ + V+YN ++ Y + GD A + M L P T++
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM-ESFGLRPNSITFN 425
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
S++D ++ + ++ V M EK + P ++ + + Y F R C
Sbjct: 426 SLIDKFCDMKEMDKAEEWVKKMAEKGVTPS---------VETYNTLIDGYGKLCTFDR-C 475
Query: 213 DEKIELQDD--------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ +E ++ + G ++ L K+G++ EA + + RG+ Y ++
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG 535
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C + ++ +++ P + + + C KGK E E+ L+ + G D
Sbjct: 536 SCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPD 595
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+SL+ Y + + K + L+ ++ L V TY L+ G K+G +E ++++
Sbjct: 596 VITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYN 654
Query: 385 YMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M ++ ++ +V + + H + +KA H ML G PD+ TY +I G
Sbjct: 655 EMLQMNLLPDR---VVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILG 709
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C G ++ V R M G +P N L+D +++ A + M+R
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556
Query: 78 VSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAF 132
+SP T++++ LC+ GK E L + S +S + YN +I Y+ G+
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L E + P TY ++ G + E E+ +++ M++ LLP + + +I
Sbjct: 617 G-LYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVY--NAMI 672
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+++G T A + + D+ I T ++ +EG++ + + + + +
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y V C R++VE ++P A + A +G+ +EV+ +
Sbjct: 733 PKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVI 792
Query: 313 LSAVLDKGLL 322
S + KG++
Sbjct: 793 CSEMNVKGII 802
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L K ++EA+++Y + G + L E Q +V L ++ G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ ++ + + K E L ++ +G+ + F + L+ C ++I A
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
+ ++ + + TY+ L+DG K G ++ A ++ + MKE V + +F ++S L
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C ++++++A EM G PD TY + G +
Sbjct: 292 CKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLL 327
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 151/378 (39%), Gaps = 44/378 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + ++D Y F ++ M G P V + +L++ L + +I
Sbjct: 450 KGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILE 509
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVID 120
A + M+ GV PN ++++ C GK + L D + S V YN++ID
Sbjct: 510 AEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLID 569
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
KKG A D L ++ + + +P TY+S++ G Y + +GL K L
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGH-SPDVITYNSLISG---YANAGNVSKCLGLYETMKNL 625
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ +TY + E IEL + ML+
Sbjct: 626 -------------GIKPTVRTYHP--LISGCSKEGIELVEKLYNEMLQM----------- 659
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+L+ +R + Y A ++ + ++ L + ++++G P M + +
Sbjct: 660 ---NLLPDRVV------YNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+GK +++L++ + K L + L++ +C + A + ++ + +
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNA 770
Query: 361 ATYDVLLDGLFKDGRMEE 378
+ + L GL ++GR++E
Sbjct: 771 SICNELTAGLEQEGRLQE 788
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 16/328 (4%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS + Y+H F + +V+ M+ YGF+P V +CNA L +L + + +A
Sbjct: 126 DSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALT 185
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYS 123
Y M R +SPN +T++LV LC+SGK E + +L GI +V+ YN +I +
Sbjct: 186 FYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHC 245
Query: 124 KKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
KG A N M G+N L P T++S++ G + K ++R M + P
Sbjct: 246 NKGLLSIATKLKNLM--GKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPN 303
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +I +G + A +++ ++ T ++ L KEG+ K+A +
Sbjct: 304 TVTY--NTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFL 361
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC----AMELSRFVA 298
+ + + S Y A ++ C + L + +V G P M S FV
Sbjct: 362 VKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVK 421
Query: 299 SQCGKGKWKEVEELL--SAVLDKGLLLD 324
++ +G + + ++ S D LL+
Sbjct: 422 NEDFEGAFNVLMDMFARSMASDSNTLLE 449
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 43/284 (15%)
Query: 200 KTYAAEMIFKRACDEKIELQD-------DTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
KTYA F+ A D ++D ++C L +L RV A+ Y + I+
Sbjct: 137 KTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRIS 196
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ ++ LCK + E+ +LR++ G P + + +A C KG +L
Sbjct: 197 PNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKL 256
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ + GL + +SL+ +C ++ +A +++ + + + TY+ L++G +
Sbjct: 257 KNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQ 316
Query: 373 DGRMEEAVRIFDYM------------------------------------KELKVVSSSS 396
G A ++++ M KE V ++S+
Sbjct: 317 VGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNAST 376
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++S C K +A + + M++ G P+E T+K + S F+
Sbjct: 377 YSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFV 420
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 190/472 (40%), Gaps = 51/472 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI----- 63
+ + +A V+ YS G + + MM+ G P +S CN + L N +
Sbjct: 166 ERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 225
Query: 64 ----------------------------RL--ASCLYGAMVRDGVSPNKFTWSLVAQILC 93
RL A L M G SP+K ++ V LC
Sbjct: 226 FLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLC 285
Query: 94 RSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ + + + L++ + S V YN + SK G A + L E R
Sbjct: 286 KEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE-AEERRFRVD 344
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
YS+I+ R + + + IV M K +P + VI L K A+ +
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD--VVTYTSVINGLCQERKVDQAKKM 402
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
++ + + +L L K G EA ++ ++ E Y ++ +
Sbjct: 403 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRR 462
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E + E C L+R+++++G+ P +E++ + S C + K E + + L+ G ++
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 522
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++++ +C ++ A++L + DV TY ++D L K GR+EEA ++ MK
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKL--AMK 580
Query: 388 ELKV---VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
L+V + ++ V+ + C + + +K ++ML + Y QVI
Sbjct: 581 MLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVI 630
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 126/293 (43%), Gaps = 8/293 (2%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKL--LPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
Y ++L+ + + + + R++ LM ++++ P+ F YV+ S GK A
Sbjct: 137 YYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAF----GYVMVSYSRAGKLRNAMRXL 192
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
IE C + L R+ +A++ + I Y + C
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDL 252
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL-DKGLLLDSFC 327
H+ E+ L+ ++ +G P + + C + + KE+ L+ +L D LL D
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++ + + D+A+ + E+ + +D Y ++ ++GRM++A I + M
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ V++ LC +++ +A K +M K G KP+ +Y +++G
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 42/273 (15%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE-AIQIYHLISERGITVRDSDYYAFV 262
AEM FK +KI ++ L KE R+KE + + ++ + + Y FV
Sbjct: 263 AEMPFKGCSPDKISYY-----TVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFV 317
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
++L K +E LR+ ER + + S V S C +G+ + +E+++ + KG +
Sbjct: 318 HMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI 377
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D +S++ C R++D+A + ++ K + +Y LL+GL K+G EA +
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 437
Query: 383 FDYMKELKVVSSS------------------------------------SFVIVVSRLCH 406
+ +E + ++ +++ LC
Sbjct: 438 MNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 497
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +A + ++ L G + + VI GF
Sbjct: 498 EEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 10/224 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ + +G + ++ R M GF P N L+ +L ++ ++ A +
Sbjct: 454 SVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLN 513
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
+G + N ++ V C+ E L LLD S+ V Y +ID KKG
Sbjct: 514 NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEE 573
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M P TY +++ R + E + ++EK L + + +
Sbjct: 574 ATKLAMKMLRV-GWIPTPVTYRTVIHQYCRMGRVEDLLK----LLEKMLSRQECRTAYNQ 628
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
VI+KL G A + + ++ +TC ++++ +G
Sbjct: 629 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 672
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 182/442 (41%), Gaps = 47/442 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + ++ YS G++ + + V++ M G +P V CN+ + AL++ A
Sbjct: 234 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 293
Query: 67 SCLYGAMVRDGVSPNKFTWSLV------AQILCRSGKFEVVLGLLDSGIYSSV-MYNLVI 119
C++ +MV G P+ ++S + A C + + +L GI + ++N++I
Sbjct: 294 KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILI 353
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ Y++ G A +M N + + P T+++
Sbjct: 354 NAYARCGMMDKAMLIFEDMQN-KGMIPDTVTFAT-------------------------- 386
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
VI L +G+ A F D + + GC+++ G + +A
Sbjct: 387 -----------VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 435
Query: 240 IQIYHLISERGITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
++ + + I Y+ + +N LCKE + E ++ +V+ G P + + +
Sbjct: 436 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 495
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G +E LL A+ G+ + + +L++ YC N +ID A+ + +
Sbjct: 496 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 555
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNH 417
Y ++L GLF+ R A ++F M E VS ++ +V+ LC +A
Sbjct: 556 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 615
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+++ M K D T+ VIS
Sbjct: 616 EKLFAMNVKFDIITFNIVISAM 637
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 195/442 (44%), Gaps = 47/442 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G +P + CN+++ L + E+ A + MV G++P+ FT+SL+ LC+S +
Sbjct: 164 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 223
Query: 100 --VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEM-----------CNG---- 141
V+ ++++G +S+ YN +I YS G + + +M CN
Sbjct: 224 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 283
Query: 142 -------------------RNLTPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLL 180
+ P +YS++L G + ++D I LM+ K +
Sbjct: 284 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 343
Query: 181 P-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P KH + +I + G A +IF+ ++ + T ++ +L + GR+ +A
Sbjct: 344 PNKHVF---NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-LSRFVA 298
+ ++ + + G+ ++ Y + C + + L+ +++ + P ++ S +
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 460
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ C +G+ E ++++ ++ G + +SLME YC +++A AL + +
Sbjct: 461 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 520
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNH 417
+ Y L+DG K+GR+++A+ +F M V +S + I++ L + A K
Sbjct: 521 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 580
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM++ G TY V+ G
Sbjct: 581 HEMIESGTTVSIHTYGVVLGGL 602
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/407 (18%), Positives = 171/407 (42%), Gaps = 19/407 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P + N L+D R + L + G ++++G+ P+ F++SL+ + + G+ + +
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 156
Query: 101 VLGLLDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L +++ G+ ++ N +I K + A + +M + + P TYS I+DG
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLIIDGLC 215
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + + ++R++ MVE P + +I S G + +FK+ +
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITY--NSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC---- 275
D C + AL K GR EA I+ + +G D ++ +L + C
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADV 330
Query: 276 -GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ ++ +G P + + + G + + + +KG++ D+ ++++
Sbjct: 331 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 390
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVV 392
C ++D A+ + + A Y L+ G G + +A + M K++
Sbjct: 391 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 450
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F +++ LC + + D M++ G +P+ T+ ++ G+
Sbjct: 451 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 143/345 (41%), Gaps = 45/345 (13%)
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
R++ R+ P TY+ ++D RR + ++ IVG +++ L P F Y
Sbjct: 86 RMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV 145
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
K ++ K A +F ++ + + C ++K L K + +A I + + GI
Sbjct: 146 KDGEVDK---AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAP 202
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV---------------- 297
Y ++ LCK ++ +L +VE G P ++ + +
Sbjct: 203 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 262
Query: 298 --ASQCG-----------------KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
S CG G+ E + + +++ KG D S+++ Y +
Sbjct: 263 KQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT- 321
Query: 339 RQIDKAIALHIKIEKLKGSLDVA----TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
D +A I L + +A +++L++ + G M++A+ IF+ M+ ++
Sbjct: 322 -ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 380
Query: 395 S-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +F V+S LC + L A+ + M+ +G P EA Y +I G
Sbjct: 381 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 425
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 160/410 (39%), Gaps = 38/410 (9%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ +M G P N L++A R + A ++ M G+ P+ T++ V L
Sbjct: 332 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 391
Query: 93 CRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR G+ + L ++D G+ S +Y +I G+ A + ++EM N PG
Sbjct: 392 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 451
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLLPKHFLSGND-------- 189
+SSI++ + + I+ +MV+ L+ + L GN
Sbjct: 452 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 511
Query: 190 -----------YVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
Y+ L D G+ A +F+ + ++ +L L +
Sbjct: 512 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 571
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R A +++H + E G TV Y + LC+ + +E LL + + +
Sbjct: 572 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 631
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+++ G+ +E +EL A+ GL+ + S ++ ++A L I +EK
Sbjct: 632 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 691
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
+ D + ++ L + +A + E + +S + +++ L
Sbjct: 692 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 741
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY- 258
+ Y + + + AC T ++ + R + I + + G+ D Y
Sbjct: 80 RNYRGQRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 139
Query: 259 --YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y FV K+ + ++ L +++E+G +P + + + C + + E ++ +
Sbjct: 140 LIYGFV----KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 195
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+D G+ D F S +++ C ++ +DKA + ++ + + TY+ L+ G G
Sbjct: 196 VDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMW 255
Query: 377 EEAVRIFDYMKELKVVSS----SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
E+VR+F M V+ + +SF+ + + E + D M+ G KPD +Y
Sbjct: 256 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIF---DSMVLKGPKPDIISY 312
Query: 433 KQVISGF 439
++ G+
Sbjct: 313 STMLHGY 319
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 33/321 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ +G +G ++ MM G P V N+L++ + A L AM
Sbjct: 455 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 514
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
G+ PN + +Y ++D Y K G A
Sbjct: 515 SIGIEPNCY------------------------------IYGTLVDGYCKNGRIDDALTV 544
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+M + + + P YS IL G + +T + ++ M+E G V+
Sbjct: 545 FRDMLH-KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYG--VVLGG 601
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
L T A M+ ++ ++ T ++ A+ K GR +EA +++ IS G+
Sbjct: 602 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 661
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + L KE EE L V + G+ + L+ V K + + LS
Sbjct: 662 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 721
Query: 315 AVLDKGLLLDSFCCSSLMEYY 335
+ + L L++ S L +
Sbjct: 722 IIGENNLTLEASTISLLASLF 742
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 176/380 (46%), Gaps = 24/380 (6%)
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKG 126
M++ G P+ T++++ + +C+S F + +LD G + V YN++I+ ++G
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKH 183
A + LN + + P +Y+++L G ARR++ +V + MV+KK +P
Sbjct: 237 RVDDAKEILNRL-SSYGFQPDIVSYTTVLKGLCAARRWDDVKV---LFAEMVDKKCVPNE 292
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
D +++ G A + ++ C ++ A+ K+GRV +A Y
Sbjct: 293 VTF--DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA---Y 347
Query: 244 HLISERGITVRDSDYYAFVNV---LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ G+ + D ++ V LC+ + E LL ++V + P + + F+
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 407
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C KG ++ +L+ + + G + ++L+ +C ++D A+ L L +
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL---FNNLPCEPNT 464
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDE 419
TY LL GL R++ A + M + +++ +F ++VS C + +AM+ ++
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524
Query: 420 MLKMGHKPDEATYKQVISGF 439
M++ G P+ T+ ++ G
Sbjct: 525 MMEHGCTPNLITFNTLLDGI 544
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 193/437 (44%), Gaps = 26/437 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D E+ + YGF P + + +L L L+ MV
Sbjct: 226 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 285
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L ++ + N+VI+ K+G
Sbjct: 286 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 345
Query: 131 AFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A+D LN M CN P +Y+++L G R + E + ++ MV K P ++
Sbjct: 346 AYDFLNNMGMYGCN-----PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE-VT 399
Query: 187 GNDYVI---QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
N ++ QK E++ + C I T ++ +GRV A++++
Sbjct: 400 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV----TYNALVHGFCVQGRVDSALELF 455
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + T+ Y + LC + + LL +++++ A+ + V+ C K
Sbjct: 456 NNLPCEPNTI---TYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQK 512
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G +E EL++ +++ G + ++L++ + ++A+ L + SLD TY
Sbjct: 513 GFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITY 572
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLK 422
++D L ++ R EEA+++ ++++ + + ++ LC E +A+ M+
Sbjct: 573 SSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 632
Query: 423 MGHKPDEATYKQVISGF 439
G P+E+TY +I G
Sbjct: 633 NGCMPNESTYIILIEGL 649
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 163/380 (42%), Gaps = 13/380 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ G+ ++V + M +G P + CN +++A+ +Q + A M G +P+
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
+++ V + LCR+G++E LL + + V +N I +KG A +L
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI-KLI 420
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG-LMVEKKLLPKHFLSGNDYVIQKL 195
E+ + G TY++++ G + + + + L E + L ++L
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERL 480
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
D AEMI K L T ++ ++G V+EA+++ + + E G T
Sbjct: 481 -DAAAELLAEMIQK-----DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ ++ + K+ EE LL +V +G + S V + + +E ++L A
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
V D G+ + ++ C + D+AI + + +TY +L++GL +G
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 654
Query: 376 MEEAVRIFDYMKELKVVSSS 395
++EA + + V+S S
Sbjct: 655 LKEARYVLSELYAKGVLSKS 674
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 190/432 (43%), Gaps = 9/432 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G G V + G+ P L+ L + ++ A + +
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGL---LDSGIYSSV--MYNLVIDFYSKKGDF 128
+ G+ ++ ++ + +C+ G + L +D + MYN +ID K
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A+ +EM + ++ TY++++ G K + + ++ MV K + P +
Sbjct: 216 SEAYGLFSEM-TAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY-- 272
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L GK A+ + ++ T ++ +K+A +++ +S
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N CK +E L +++ ++ +P + S + C G+
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
V +L+ + D+G+ + +SL++ C N +D+AIAL K++ T+ +LLD
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR+++A F D + + + + ++++ C L +A+ +M + G P
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512
Query: 428 DEATYKQVISGF 439
+ T+ +I+
Sbjct: 513 NAVTFDIIINAL 524
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 155/350 (44%), Gaps = 14/350 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++DAL + + A L+ M G+S + T++ + C + K + +GL
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ YN+++D K+G A + L M + P TYS+++DG
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA-CVKPDVITYSTLMDGYF 315
Query: 160 RYEKTEVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + + + M + P + + N + K+ D A +FK + +
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD-----EALNLFKEMHQKNM 370
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K GR+ + + +RGI Y + ++ LCK +
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIA 430
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ++G PC+ + + C G+ K+ +E +L KG LD + + ++ +C
Sbjct: 431 LFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+++A+ + K+E+ + T+D++++ LFK ++A ++ M
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 186/463 (40%), Gaps = 81/463 (17%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD ++ + + + + + G P + N L++ +I + +++ G
Sbjct: 65 ILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
P+ T++ + + LC G+ L LL GI + V Y +I+ K GD A
Sbjct: 125 YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAI 184
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEK--------TEVSDR------------IVG 172
+L +GR P Y++I+D +Y+ +E++ + I G
Sbjct: 185 -KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYG 243
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE-KIELQDDTCGCMLKALS 231
+ KL L N+ V++ ++ Y ++ C E K++ + MLKA
Sbjct: 244 FCIASKLKEAIGLL-NEMVLKTINP--NVYTYNILVDALCKEGKVKEAKNVLAVMLKACV 300
Query: 232 KEG---------------RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
K +K+A +++ +S G+T Y +N CK +E
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALN 360
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +++ ++ +P + S + C G+ V +L+ + D+G+
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGI--------------- 405
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+V TY+ L+DGL K+G ++ A+ +F+ MK+ + S
Sbjct: 406 --------------------PANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF 445
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+F I++ LC L+ A + ++L G+ D Y +I+G
Sbjct: 446 TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 8/283 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ---ILCRSGKFEVV 101
P V N L+DAL ++ +++ A + M++ V P+ T+S + ++ K + V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326
Query: 102 LGLLD-SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ G+ V Y ++I+ + K A + EM + +N+ PG TYSS++DG
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEM-HQKNMVPGIVTYSSLIDGLC 385
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ + ++ M ++ + P + ++ N +I L G A +F + D+ I
Sbjct: 386 KSGRISYVWDLIDEMRDRGI-PANVITYNS-LIDGLCKNGHLDRAIALFNKMKDQGIRPC 443
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L K GR+K+A + + + +G + Y +N CK+ EE +L
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ E G +P A+ + + K + + E+LL ++ +GLL
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 10/313 (3%)
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + N M R+ TP ++ ILD + + + + + K + P L +
Sbjct: 43 AVSQFNRMLCMRH-TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPD--LITLNI 99
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I MG+ + + + T ++K L +G+V +A+ + + +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y +N +CK L+R + R P + + + C E
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L S + KG+ D ++L+ +C ++ +AI L ++ + +V TY++L+D L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHK 426
K+G+++EA + M + V VI S L + EL+KA + M MG
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPD---VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336
Query: 427 PDEATYKQVISGF 439
PD +Y +I+GF
Sbjct: 337 PDVHSYTILINGF 349
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G V N+L+D L + + A L+ M G+ P FT++++ LC+ G+
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459
Query: 98 F----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E LL G + V YN++I+ + K+G A L++M P T+
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM-EENGCVPNAVTFD 518
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLL 180
I++ + ++ + +++++ M+ + LL
Sbjct: 519 IIINALFKKDENDKAEKLLRQMICRGLL 546
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 192/439 (43%), Gaps = 51/439 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D G D ++ M+ G P + N ++ A L M+
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
+SPN T++ + + GKF E+ +L GI +++ YN +ID + K+ A
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN-- 188
A D M + +P T+++++DG Y + D + L+ E +P+ L N
Sbjct: 377 AEDMFYLMAT-KGCSPDVFTFTTLIDG---YCGAKRIDDGMELLHE---MPRRGLVANTV 429
Query: 189 --DYVIQKLSDMGKTYAA-----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I +G AA +MI C + + TC +L L G++K+A++
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV-----TCNTLLDGLCDNGKLKDALE 484
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + + + + S + G+ DV+ + C +
Sbjct: 485 MFKAMQKSKMDLDASHPFN---------------GVEPDVLTYNILICGL---------I 520
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+GK+ E EEL + +G++ D+ SS+++ C ++D+A + + + S +V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
T++ L++G K GR+++ + +F M +V+ + ++ ++ + + A+ EM
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Query: 421 LKMGHKPDEATYKQVISGF 439
+ G PD T + +++GF
Sbjct: 641 ISSGVYPDTITIRNMLTGF 659
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/522 (20%), Positives = 207/522 (39%), Gaps = 106/522 (20%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
+ ++L L Y KGL D ++++ M +P+V N L+ A+ R L LY
Sbjct: 46 RGESLKLRSGSYEIKGL-EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY 104
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVID 120
M R + + ++++++ + C K L D ++++++ L +D
Sbjct: 105 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLD 164
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ A D +++C P T++++++G R + + ++ MVE L
Sbjct: 165 HRVSE-----ALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQ 214
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA--------------------CDEK----- 215
P G + + MG T +A + ++ C +
Sbjct: 215 PDQITYGT--FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272
Query: 216 ----IELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
IE+QD T CM+ GR A ++ + ER I+ Y A +N
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
KE + E L +++ RG IP + + + C + + E++ + KG D
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEK------------------LKGSL-------- 358
F ++L++ YC ++ID + L ++ + L G L
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452
Query: 359 ---------DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS------------F 397
D+ T + LLDGL +G++++A+ +F M++ K+ +S +
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I++ L + + +A + ++EM G PD TY +I G
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 176/399 (44%), Gaps = 9/399 (2%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVL 102
V A +++ L R+ ++ A L+ AM+ G SP+ T+S + L ++ +V
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267
Query: 103 GLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
++ +G+ +MY ++ Y G A +MC + P TY++++D +
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCR-HGVEPDVVTYTALMDYLCKN 326
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
K+ + +I +V++ P G ++ + G + + ++L
Sbjct: 327 GKSTEARKIFDSLVKRGHKPDSTTYGT--LLHGYATEGALVEMHDLLDLMMKKGMQLGHH 384
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
++ A +K +V EA+ ++ + ++G+ +Y +++LC + ++ +
Sbjct: 385 IFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 444
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P + + + C KW +VEEL ++D+G+ LD+ +++M C ++
Sbjct: 445 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 504
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
+A L + ++ + TY+ L+DG DG+M+EA+++ M V S ++ +
Sbjct: 505 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 564
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + + EM G P TY+ ++ G
Sbjct: 565 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 603
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 156/406 (38%), Gaps = 81/406 (19%)
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLL-------DSGIYSSVMYNLVIDFYSKKGDFG 129
G P+ F+++++ + LC + L LL V Y VI+ ++G
Sbjct: 166 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 225
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A+ + M + R +P TYSSI+ + + + + ++ MV+ ++P
Sbjct: 226 KAYSLFDAMLD-RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD------- 277
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
C L C G+ KEAI I+ +
Sbjct: 278 ----------------------CIMYTSLVHGYC--------SSGKPKEAIGIFKKMCRH 307
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y A ++ LCK + E + +V+RG+ P + + +G E+
Sbjct: 308 GVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEM 367
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+LL ++ KG+ L + +M Y + ++D+A+ + + + + D+ Y +LD
Sbjct: 368 HDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDI 427
Query: 370 LFKDGRMEEAVRIFDYMK----------------------------ELKV--------VS 393
L GR+++A+ F+ +K EL +
Sbjct: 428 LCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLD 487
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F ++ LC + +A D M+++G +P+ TY +I G+
Sbjct: 488 TIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 533
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 173/423 (40%), Gaps = 51/423 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V++ +G ++ M G P V ++++ AL + + A+ ++ M
Sbjct: 210 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 269
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF 128
V++GV P+ ++ + C SGK + +G+ G+ V+ Y ++D+ K G
Sbjct: 270 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 329
Query: 129 GAA---FDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A FD L + R P +TY ++L G A E+ D ++ LM++K + H
Sbjct: 330 TEARKIFDSLVK----RGHKPDSTTYGTLLHGYATEGALVEMHD-LLDLMMKKGMQLGHH 384
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI-QIY 243
+ + ++ + K A ++F + + G +L L GRV +A+ Q
Sbjct: 385 IF--NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 442
Query: 244 HLISE----------------------------------RGITVRDSDYYAFVNVLCKEH 269
L SE RGI + + A + LCK+
Sbjct: 443 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 502
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ E L +V G P + + C GK E +LL ++ G+ +
Sbjct: 503 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 562
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+++ Y N +I+ + L +++ + + TY++LL GLF+ GR A ++ M +
Sbjct: 563 TIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKW 622
Query: 390 KVV 392
V
Sbjct: 623 DTV 625
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 192/439 (43%), Gaps = 14/439 (3%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ALS VL Y+ GL LEVY +++++ +P+ ACN+LL+ L + I A LY
Sbjct: 134 EALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYD 193
Query: 72 AMVR----DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFY 122
M+ D + + +T S++ + LC G+ E + L++S + + V YN +ID Y
Sbjct: 194 EMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGY 253
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
KKG+ +A+ +L + + P T+ S+++G + E D ++ M ++ L
Sbjct: 254 CKKGEVESAY-KLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVN 312
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ N +I +G A+ K + E T ++ G V+EA ++
Sbjct: 313 VQMYNN--IIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKL 370
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
RG+ Y V+ CK+ + + L ++ G + +
Sbjct: 371 LEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVV 430
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ + ++++G+L D+ + LM ++ A + ++ + D
Sbjct: 431 AGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFV 490
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
Y L+DG + G ++EA ++F + E + + +++ + A+ D+M
Sbjct: 491 YATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMR 550
Query: 422 KMGHKPDEATYKQVISGFM 440
+ H PD T+ +I G++
Sbjct: 551 RAHHVPDIFTFSTIIDGYV 569
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 178/428 (41%), Gaps = 23/428 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG DG+++ G VP + N L+D ++ E+ A L+ + G P T
Sbjct: 221 KGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQT 280
Query: 85 WSLVAQILCRSGKFEVV----LGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ + C+ G FE + L + D G+ +V MYN +ID K G A D L EM
Sbjct: 281 FGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMS 340
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P TY+++++ + E +++++ + + L P + +
Sbjct: 341 E-NCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKL---------TYTPLV 390
Query: 200 KTYAAEMIFKRACDEKIELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
Y + + +A D IE+ + G ++ L G V A+ I + RGI
Sbjct: 391 HGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGIL 450
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y +N L K+ + +L +++++ P A + V G E ++L
Sbjct: 451 PDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKL 510
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+++KGL + +++ + + +D AI K+ + D+ T+ ++DG K
Sbjct: 511 FQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVK 570
Query: 373 DGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
M ++IF M K+ + ++ +++ C E + A K M G KP T
Sbjct: 571 QHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVT 630
Query: 432 YKQVISGF 439
Y +I F
Sbjct: 631 YSILIGSF 638
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 178/426 (41%), Gaps = 47/426 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EV 100
P + N L++ + E+ A L +R G++PNK T++ + C+ G++ +
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405
Query: 101 VLGLLDSGI------YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
++ + SG+ Y ++++ LV+ G+ A + M N R + P + Y+ +
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVV-----AGEVDTALTIRDRMMN-RGILPDANIYNVL 459
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
++G + K ++ ++ M+++ + P F+ ++ G A+ +F+ ++
Sbjct: 460 MNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYAT--LVDGFIRHGNLDEAKKLFQLIIEK 517
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL---CKEHQP 271
++ M+K SK G + AI I + D + F ++ K+H
Sbjct: 518 GLDPGVVGYNVMIKGFSKSGMMDNAILC---IDKMRRAHHVPDIFTFSTIIDGYVKQHNM 574
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
V + +V++ P + + + C KG+ K E+L S + GL S L
Sbjct: 575 NAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ +C ++ KA++ + K + + A + L++G F + + R + + E
Sbjct: 635 IGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNG-FTNTKATAVSREPNNLHE--- 690
Query: 392 VSSSSFVIVVSR-------------------LCHLKELRKAMKNHDEMLKMGHKPDEATY 432
S S F SR LC + ++ A++ ++ML G D ++
Sbjct: 691 NSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSF 750
Query: 433 KQVISG 438
+I G
Sbjct: 751 VALIHG 756
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 128/321 (39%), Gaps = 37/321 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D ++++ +S G+ + + MR VP + + ++D +Q+ +
Sbjct: 517 KGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNA 576
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVID 120
++G MV+ PN T++ + CR G+ ++ L G+ SV+ Y+++I
Sbjct: 577 VLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIG 636
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K+ G A M + TP + + +++G + T VS L + +
Sbjct: 637 SFCKEAKLGKAVSYFELMLINK-CTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSM 695
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ F F R + + C+L L ++ VK A+
Sbjct: 696 FEDF-----------------------FSRMIGDGWTQKAAAYNCILICLCQQRMVKTAL 732
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA----MELSRF 296
Q+ + + G+ + A ++ +C E +E ++ + G + A +EL +F
Sbjct: 733 QLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKF 792
Query: 297 VASQCGKGKWKEVEELLSAVL 317
+ +G E +L A++
Sbjct: 793 IP----EGGISEASGILQAMI 809
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 192/439 (43%), Gaps = 51/439 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D G D ++ M+ G P + N ++ A L M+
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVIDFYSKKGDFGA 130
+SPN T++ + + GKF E+ +L GI +++ YN +ID + K+ A
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN-- 188
A D M + +P T+++++DG Y + D + L+ E +P+ L N
Sbjct: 377 AEDMFYLMAT-KGCSPDVFTFTTLIDG---YCGAKRIDDGMELLHE---MPRRGLVANTV 429
Query: 189 --DYVIQKLSDMGKTYAA-----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I +G AA +MI C + + TC +L L G++K+A++
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV-----TCNTLLDGLCDNGKLKDALE 484
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + + + + S + G+ DV+ + C +
Sbjct: 485 MFKAMQKSKMDLDASHPFN---------------GVEPDVLTYNILICGL---------I 520
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+GK+ E EEL + +G++ D+ SS+++ C ++D+A + + + S +V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
T++ L++G K GR+++ + +F M +V+ + ++ ++ + + A+ EM
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Query: 421 LKMGHKPDEATYKQVISGF 439
+ G PD T + +++GF
Sbjct: 641 ISSGVYPDTITIRNMLTGF 659
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/522 (20%), Positives = 207/522 (39%), Gaps = 106/522 (20%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
+ ++L L Y KGL D ++++ M +P+V N L+ A+ R L LY
Sbjct: 46 RGESLKLRSGSYEIKGL-EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY 104
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVID 120
M R + + ++++++ + C K L D ++++++ L +D
Sbjct: 105 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLD 164
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ A D +++C P T++++++G R + + ++ MVE L
Sbjct: 165 HRVSE-----ALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQ 214
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA--------------------CDEK----- 215
P G + + MG T +A + ++ C +
Sbjct: 215 PDQITYGT--FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272
Query: 216 ----IELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
IE+QD T CM+ GR A ++ + ER I+ Y A +N
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
KE + E L +++ RG IP + + + C + + E++ + KG D
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEK------------------LKGSL-------- 358
F ++L++ YC ++ID + L ++ + L G L
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452
Query: 359 ---------DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS------------F 397
D+ T + LLDGL +G++++A+ +F M++ K+ +S +
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
I++ L + + +A + ++EM G PD TY +I G
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 205/475 (43%), Gaps = 43/475 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EGR + ++++ F + L++++ M GF P + A + +++L
Sbjct: 25 EGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKL 84
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLD--SGIYSSVMYNLVID 120
A L+ M R V PN F ++++ LC+ + E + G + + + + V +N +ID
Sbjct: 85 AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLID 144
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G+ A L E + P T++S+L G + + E + ++ + +
Sbjct: 145 GYCKAGEVDVAIG-LRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFV 203
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + SD G A ++ ++ A + +++ + TC +L L KEG+V++A
Sbjct: 204 PDGFTYSIIFDGLLKSDDGAGAALDL-YREAIGKGVKIDNYTCSILLNGLCKEGKVEKAE 262
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + E G+ + Y VN C+ + + + RG P + + +
Sbjct: 263 EVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKF 322
Query: 301 CGKGKWKEVEELLSAVLDKG---------LLLDSFC-------CSSLMEYYCSNRQIDKA 344
C + EE + ++ KG +L+D + C ++E N +
Sbjct: 323 CEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNV 382
Query: 345 IALHIKIEKL------------------KGSLDVAT-YDVLLDGLFKDGRMEEAVRIFDY 385
I+ I L +G L A Y++L+DG G++ EA+R FD
Sbjct: 383 ISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDE 442
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + + ++ ++ ++ LC + +L++A + + GH PD TY +ISG+
Sbjct: 443 MSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 187/421 (44%), Gaps = 33/421 (7%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASC-LYGAMVRDGVSPNKFTWSLVAQILCRSG 96
++ GFVP + + D L + ++ A+ LY + GV + +T S++ LC+ G
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256
Query: 97 KFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K E V+ L++ G+ V+YN +++ Y + GD A + +M R L P +
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQM-ESRGLRPNCIAF 315
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+S++D + + ++ V MV K + P ++ + + Y +F R
Sbjct: 316 NSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS---------VETYNILIDGYGRLCVFSRC 366
Query: 212 CDEKIELQDD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E++++ + G ++ L K+G++ EA + + RG+ + Y ++
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C + E ++ + G + + + C GK KE EE+ + G D
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG-RMEEAVRIF 383
+SL+ Y + K + L+ ++KL + T+ L+ G K+G +++E +F
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET--LF 544
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKE----LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M ++ + S +V + + H + ++KA EM+ MG +PD TY +I G
Sbjct: 545 NEMLQMNL---SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601
Query: 440 M 440
+
Sbjct: 602 L 602
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 181/431 (41%), Gaps = 12/431 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++L+ +G EV + + +G VP N +++ + ++ A M
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
G+ PN ++ V C E V ++ GI SV YN++ID Y + F
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365
Query: 131 AFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
F L EM NG P +Y S+++ + K ++ ++ MV + +LP + +
Sbjct: 366 CFQILEEMEENGEK--PNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY--N 421
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I +GK A F I T ++K L K G++KEA +++ LI+
Sbjct: 422 MLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITST 481
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + ++ ++ L + + G P + S C K K
Sbjct: 482 GHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI-SGCSKEGIKLK 540
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E L + +L L D ++++ Y + KA +L ++ + D TY+ L+ G
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K+G++ E + D MK ++ + ++ +++ C LK+ A + EML+ G P+
Sbjct: 601 HLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660
Query: 429 EATYKQVISGF 439
++ +G
Sbjct: 661 VCICNELSTGL 671
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 171/394 (43%), Gaps = 15/394 (3%)
Query: 2 IQSCEGRDSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
I+ E R + + A + V+D + + E + M G P+V N L+D R
Sbjct: 300 IEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGR 359
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVL-GLLDSGIYSSV-M 114
+ M +G PN ++ + LC+ GK E+VL ++ G+ + +
Sbjct: 360 LCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN++ID G A +EM NG T TY+S++ G + K + ++ + L
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGAT--IVTYNSLIKGLCKMGKLKEAEEMFFL 477
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ P + +I S+ G + +++ ++ +T ++ SKE
Sbjct: 478 ITSTGHCPDVITY--NSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKE 535
Query: 234 G-RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G ++KE + ++ + + ++ Y A ++ + ++ L +++V+ G P
Sbjct: 536 GIKLKETL--FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKT 593
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + +GK E ++L+ + KGL+ ++ S L++ +C + + A + ++
Sbjct: 594 YNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREML 653
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ +V + L GL KDGR++EA I M
Sbjct: 654 ENGFLPNVCICNELSTGLRKDGRLQEAQSICSEM 687
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 226 MLKALSKEGRVKEAI-QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
ML ++ E ++ + ++Y + + G V L + + + V L +++V
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G+ P + R + + G K EL + + ++ + F + L+ C ++I A
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 345 IALHIKIEKLKGSLDV-------ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
EKL G + V T++ L+DG K G ++ A+ + + MK+ KV S +
Sbjct: 121 -------EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIIT 173
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
F ++S LC + + +A +E+ G PD TY + G +
Sbjct: 174 FNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLL 217
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 198/490 (40%), Gaps = 78/490 (15%)
Query: 25 KGLFMD-GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
KG MD +Y M G +P V +AL+D L R + A L+ M + GV+PN
Sbjct: 269 KGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHV 328
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEM 138
T+ + L ++ + LGLL + V MY ++D K+G A D L
Sbjct: 329 TYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRH- 387
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-----HFLSG------ 187
N+TP F TY+ ++D R + +++++ M EK ++P ++G
Sbjct: 388 AQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGC 447
Query: 188 ----NDYVIQKLSDMG-----KTY--------------AAEMIFKRACDEKIELQDDTCG 224
DY ++K+ D G TY AA +++ E +E +
Sbjct: 448 LGKAADY-MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVD 506
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ L K G ++ A ++ + ERG+ + +Y ++ L K + ++++E+
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
P A+ + F+ C GK+ E + L + + GL D ++++ C + KA
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA 626
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--------- 395
+ L ++++ ++ TY L+ GL + G +++A + + M +S
Sbjct: 627 LKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686
Query: 396 ---------------------------SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+ +V LC R A DEML G PD
Sbjct: 687 CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPD 746
Query: 429 EATYKQVISG 438
T+ +I G
Sbjct: 747 TITFNALILG 756
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 181/417 (43%), Gaps = 19/417 (4%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V M G V N+L+ + + A + M DGV PN T++ +
Sbjct: 207 LAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGE 266
Query: 92 LCRSGK-----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ GK F + G++ SG+ V+ + ++D + G F A+ EM + +
Sbjct: 267 YCK-GKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREM-DKIGVA 324
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY +++D + + S ++G MV + ++ + ++ +L GK A+
Sbjct: 325 PNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY--TALMDRLGKEGKIEEAK 382
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + A + I T ++ A + G + A Q+ + E+ + + + +N L
Sbjct: 383 DVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA---VLDKGLL 322
K + +R + + G P + + G K++ E L +L +G+
Sbjct: 443 VKRGCLGKAADYMRKMKDSGIAPNVVTYGTLID---GFFKFQGQEAALDVYRDMLHEGVE 499
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
++F SL+ N I+ A AL +++ LD Y L+DGLFK G M A ++
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559
Query: 383 FDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ E K +S + V + ++ LC L + +A EM G +PD+ATY +I+
Sbjct: 560 GQELME-KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIA 615
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 179/431 (41%), Gaps = 9/431 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S +++ +G + R M+ G P V L+D ++ A +Y M+
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDFG 129
+GV N F + L ++G E L + G+ V Y ++D K G+
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AAF E+ +NL+P Y+ ++ K + + M L P + +
Sbjct: 555 AAFKVGQELME-KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ--ATYN 611
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I GKT A + K I+ T ++ L + G VK+A + + ++
Sbjct: 612 TMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASA 671
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + + +P+ + + ++ G + V C G +
Sbjct: 672 GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNA 731
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L +G+ D+ ++L+ +C + +D A A++ ++ S ++AT++ LL G
Sbjct: 732 TVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGG 791
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L GR+ EA + MK++ + ++ ++ I+V+ +A++ + EM+ G P
Sbjct: 792 LESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 851
Query: 429 EATYKQVISGF 439
+TY ++S F
Sbjct: 852 ASTYNSLMSDF 862
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 153/354 (43%), Gaps = 27/354 (7%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---- 106
N L AL Q RLA + M + GVS + T S LCR+G L +
Sbjct: 119 NIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVR 178
Query: 107 -SGI--YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----AR 159
GI V +N +ID Y K D AA + M + + Y+S++ G
Sbjct: 179 GRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTT-QGVALDVVGYNSLVAGFFHSGD 237
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
EV +R+ VE ++ L G +Y K D + M+ + + L
Sbjct: 238 ADAALEVVERMKADGVEPNVVTYTALIG-EYCKGKGMDEAFSLYEGMVRSGVLPDVVTLS 296
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L ++G+ EA ++ + + G+ Y ++ L K + E GLL
Sbjct: 297 -----ALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLG 351
Query: 280 DVVERGYIPCAMELSRFVA--SQCGK-GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++V RG + M+L + A + GK GK +E +++L + + + L++ +C
Sbjct: 352 EMVSRGVV---MDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHC 408
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
ID A + +++E+ +V T+ +++GL K G + +A DYM+++K
Sbjct: 409 RAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAA---DYMRKMK 459
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/460 (18%), Positives = 168/460 (36%), Gaps = 69/460 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D +G + +V R + P L+DA R I A + M
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
V PN T +SS++ LV K+G G A D +
Sbjct: 426 KSVIPNVVT-------------------------FSSIINGLV-----KRGCLGKAADYM 455
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+M + + P TY +++DG +++ E + + M+ + + +F+ D ++ L
Sbjct: 456 RKMKD-SGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV--DSLVNGL 512
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G AE +FK + + L ++ L K G + A ++ + E+ ++
Sbjct: 513 RKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW--------- 306
Y F+N LC + E L+++ G P + +A++C +GK
Sbjct: 573 VVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Query: 307 --------------------------KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
K+ + LL+ + G S +++ +R+
Sbjct: 633 MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRR 692
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
D + +H + D+ Y+ L+ L G A + D M + + +F
Sbjct: 693 PDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNA 752
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C L A + +ML G P+ AT+ ++ G
Sbjct: 753 LILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGL 792
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 184/454 (40%), Gaps = 54/454 (11%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L+VYR M G ++L++ L + I A L+ M G+ + ++ +
Sbjct: 487 LDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDG 546
Query: 92 LCRSGK----FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
L ++G F+V L++ + +V+YN+ I+ G F A L EM N L P
Sbjct: 547 LFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRN-TGLEP 605
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
+TY++++ R KT + +++ M + P L ++ L + G A+
Sbjct: 606 DQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN--LITYTTLVVGLLEAGVVKKAKF 663
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ T +L+A S R ++I+ L+ G+ + Y V+VLC
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC------------------------- 301
+L +++ RG P + + + C
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783
Query: 302 ----------GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
G+ E + +LS + GL ++ L+ Y ++ +K AL +
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA--KKSNKVEALRLYC 841
Query: 352 EKL-KGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLK 408
E + KG + A TY+ L+ K G M +A +F MK V+ +SS++ I+++ L+
Sbjct: 842 EMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLR 901
Query: 409 ---ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E+R +K +M ++G KP + T + F
Sbjct: 902 NGIEVRILLK---DMKELGFKPSKGTISSMSRAF 932
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 45/292 (15%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
LE++ +M G ++ N L+ L R A+ + M+ G++P+ T++ +
Sbjct: 697 LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG 756
Query: 92 LCRS----GKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C+S F + +L G+ ++ +N ++ G G A L++M L P
Sbjct: 757 HCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDM-KKVGLEP 815
Query: 147 GFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
TY ++ G A++ K E + R+ MV K +PK TY +
Sbjct: 816 NNLTYDILVTGYAKKSNKVE-ALRLYCEMVSKGFIPK----------------ASTYNS- 857
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ +K G + +A +++ + RG+ S Y +N
Sbjct: 858 --------------------LMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
K EV LL+D+ E G+ P +S + G E LL +
Sbjct: 898 SKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLF 949
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 9/188 (4%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y F+ L ++ +L ++ +RG + +S + C G E L ++
Sbjct: 118 YNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLV 177
Query: 318 -DKGL-LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+G+ LD ++L++ YC + + A+A+ ++ +LDV Y+ L+ G F G
Sbjct: 178 RGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGD 237
Query: 376 MEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+ A+ + + MK E VV ++ ++ C K + +A ++ M++ G PD T
Sbjct: 238 ADAALEVVERMKADGVEPNVV---TYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294
Query: 432 YKQVISGF 439
++ G
Sbjct: 295 LSALVDGL 302
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 171/424 (40%), Gaps = 44/424 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G+ V+ +M + G + ALL L +R A ++ M D +P+
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
++ + LC +G+ ++ + +G + V+YN +ID Y G+ A ++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHAL-KVF 235
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E +G +P TY+ ++ G L
Sbjct: 236 EGMDGNRCSPNVRTYTELIHG-------------------------------------LC 258
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
GK A ++F R + +E T +++ EG ++ A ++ HL+ G+ D
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ ++ LCK + EE L +V++G + + + C GK +EL+ +
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ +G + D+ SSL++ C +++ +A + + + TY +++D L ++
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
E +IFD M + ++ + V C + A +M+ G P+ TY +
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498
Query: 436 ISGF 439
I G+
Sbjct: 499 IRGY 502
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 180/413 (43%), Gaps = 21/413 (5%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P + NAL+D E+ A ++ M + SPN T++ + LC+SGK E
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 102 LGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L +++G+ +V+ Y +I +G AF RL + L P T+S ++D
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF-RLLHLMETNGLVPNDWTFSVLID 325
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ EK E + +G +V+K + + + +I L GK AA+ + ++ E
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS--LIDGLCKTGKIDAADELMQKMISEGF 383
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ L ++ ++ +A + + E+GI Y ++ L +E E
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++ G P + + FV S C +G+ ++ E ++ ++D+G+ + ++L+ Y
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY--MKELKV--- 391
+ + +A + + + +Y VLL + K + +V I+ MK+L+V
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563
Query: 392 --------VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ + + LC + L +A M P E Y +I
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + + C G ++ L+++L GL DS+ +S + YC + A + + +
Sbjct: 76 TTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFV-LMP 134
Query: 354 LKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELR 411
L+G L A TY LL GL G + EA+ +F M+ + + +V LC
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A +E + G +P+ Y +I G+
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGY 222
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 187/450 (41%), Gaps = 37/450 (8%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + GF P + N LL L ++ + A L+ M
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
+ PN T++ + LCR G+ + LLD + + + Y ++D K GD
Sbjct: 77 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+DG + + + + M +K + P +
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD--IVTY 190
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I GK A+ + + KI T ++ AL KEG + A + +
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE------------------RGYIPCA 290
G+ ++ LC G L+D +E G P
Sbjct: 251 SGVCPNVVTCNTLLDGLCDS-------GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ ++ +GK+ E EEL + +G++ D+ SS++ C ++D+A +
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ S ++ T++ L+ G K G +++ + +F M +V+++ +++ ++ +
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ EM+ G PD T + +++G
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 168/376 (44%), Gaps = 27/376 (7%)
Query: 83 FTWSLVAQILCRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNE 137
++++++ + C K L L G + + V +N ++ + A D ++
Sbjct: 16 YSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
MC P T++++++G R + + ++ MVE L P G ++ +
Sbjct: 76 MCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT--IVDGMCK 128
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
MG T +A + ++ +E ++ D ++ L K+GR +A ++ + ++GI
Sbjct: 129 MGDTVSALNLLRKM-EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N C + E LL++++ R P + S + + +G ++LL
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYD 364
++ G+ + C++L++ C + ++ A+ + ++K +D V TY+
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L+ GL +G+ EA +++ M +V + ++ +++ LC L +A + D M
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 424 GHKPDEATYKQVISGF 439
P+ T+ +I+G+
Sbjct: 368 SFSPNIVTFNTLITGY 383
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
++G F++ E+Y M G VP +++++ L +Q+ + A+ ++ +M SPN
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374
Query: 84 TWSLVAQILCRSGKFEVVLGLL-DSG----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + C++G + L L + G + +++ Y +I + K G+ + D EM
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ + P T ++L G E+ + R + ++ E ++ H L G
Sbjct: 435 IS-SGVYPDTITIRNMLTGLWSKEELK---RALAMLEELQMSMDHHLVG 479
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 189/416 (45%), Gaps = 20/416 (4%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V ++ G VP V N L+ + EI A + R V+P+ T++ + + LC
Sbjct: 171 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLC 227
Query: 94 RSGKFEVVLGLLDSGI----YSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
SGK + + +LD + Y V+ Y ++I+ K+ G A L+EM N + P
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN-KGSKPDV 286
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+ +++G + + + + + + M P + ++ +++ + G+ AE +
Sbjct: 287 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN--VITHNIILRSMCSTGRWMDAEKLL 344
Query: 209 ----KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++ C + T ++ L ++G + AI I + G T Y ++
Sbjct: 345 SDMLRKGCSPSVV----TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 400
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CKE + + L +V RG P + + + + C GK E+L+ + KG
Sbjct: 401 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 460
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+++++ + ++AI L ++ + D+ TY L+ GL ++G+++EA++ F
Sbjct: 461 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 520
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ L + ++ ++ ++ LC ++ +A+ M+ KP EATY +I G
Sbjct: 521 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 177/454 (38%), Gaps = 111/454 (24%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
G DG + M G +P + C +L+ R + + K
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTK-----------------KA 168
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
TW V +IL +SG V + YN++I Y K G+ A L+ M N
Sbjct: 169 TW--VMEILEQSGAVPDV-----------ITYNVLISGYCKSGEIDNALQVLDRM----N 211
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+ P TY++IL + L D GK
Sbjct: 212 VAPDVVTYNTIL-------------------------------------RTLCDSGKLKQ 234
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A + R ++ T +++A KE V +A+++ + +G Y +N
Sbjct: 235 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 294
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL-- 321
+CKE + +E L ++ G P + + + S C G+W + E+LLS +L KG
Sbjct: 295 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354
Query: 322 ------LLDSFCC---------------------------SSLMEYYCSNRQIDKAIALH 348
+L +F C + L+ +C +++D+AI +
Sbjct: 355 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE-Y 413
Query: 349 IKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLC 405
+ I +G D+ TY+ LL L KDG+++ AV I + + K S ++ V+ L
Sbjct: 414 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLS 472
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + +A+K DEM + G KPD TY ++SG
Sbjct: 473 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 10/332 (3%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ + S+ D ++ ++++ +G + ++ M YG P V N +L ++
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSV 113
A L M+R G SP+ T++++ LCR G + +L+ +S+
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++ + K+ A + L+ M + R P TY+++L + K +V+ I+
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ K P L + VI LS +GKT A + + ++ T ++ LS+E
Sbjct: 452 LSSKGCSP--VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 509
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V EAI+ +H + GI Y + + LCK Q + L ++ + P
Sbjct: 510 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 569
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + +G KE +LL+ + +GL+ S
Sbjct: 570 TILIEGIAYEGLAKEALDLLNELCSRGLVKKS 601
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+++++ +GL +++ M ++G P + N LL ++ ++ A M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIYSSVM--YNLVIDFYSKKGDF 128
V G P+ T++ + LC+ GK +V +L L S S V+ YN VID SK G
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+EM + L P TYSS++ G R K + + + + + P + ++ N
Sbjct: 478 ERAIKLLDEM-RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP-NAITYN 535
Query: 189 DYVI----QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
++ + +D + A MI KR + + T +++ ++ EG KEA+ + +
Sbjct: 536 SIMLGLCKSRQTDRAIDFLAYMISKRC-----KPTEATYTILIEGIAYEGLAKEALDLLN 590
Query: 245 LISERGITVRDS 256
+ RG+ + S
Sbjct: 591 ELCSRGLVKKSS 602
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 171/424 (40%), Gaps = 44/424 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G+ V+ +M + G + ALL L +R A ++ M D +P+
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
++ + LC +G+ ++ + +G + V+YN +ID Y G+ A ++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHAL-KVF 235
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E +G +P TY+ ++ G L
Sbjct: 236 EGMDGNRCSPNVRTYTELIHG-------------------------------------LC 258
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
GK A ++F R + +E T +++ EG ++ A ++ HL+ G+ D
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ ++ LCK + EE L +V++G + + + C GK +EL+ +
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ +G + D+ SSL++ C +++ +A + + + TY +++D L ++
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
E +IFD M + ++ + V C + A +M+ G P+ TY +
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498
Query: 436 ISGF 439
I G+
Sbjct: 499 IRGY 502
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 185/451 (41%), Gaps = 56/451 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P + NAL+D E+ A ++ M + SPN T++ + LC+SGK E
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 102 LGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L +++G+ +V+ Y +I +G AF RL + L P T+S ++D
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF-RLLHLMETNGLVPNDWTFSVLID 325
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ EK E + +G +V+K + + + +I L GK AA+ + ++ E
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS--LIDGLCKTGKIDAADELMQKMISEGF 383
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ L ++ ++ +A + + E+GI Y ++ L +E E
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++ G P + + FV S C +G+ ++ E ++ ++D+G+ + ++L+ Y
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 337 SNRQIDKAIA----------------------LHIKIEKLKGSLDVA------------- 361
+ + +A + L +K S+D+
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563
Query: 362 ------------TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLK 408
Y + L + R+EEA F M+ + S + ++ C LK
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLK 623
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L A+ D M K G+ P +Y+ +IS
Sbjct: 624 ILTDALTLLDSMTKSGYLPHLESYRIIISSL 654
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 134/305 (43%), Gaps = 22/305 (7%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ + M GFVP + ++L+D L RQ ++ A+ + M+ G+ + T++++ L
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Query: 93 CRS----GKFEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
R G ++ ++ +GI V Y + + Y ++G A + +M + R + P
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD-RGVFPN 491
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEK-------------KLLPKHFLSGNDYVIQK 194
TY++++ G + +MV K +L+ K S N I K
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
++DM +++ + + ++ L D C ++ L + R++EA + + +T
Sbjct: 552 IADMKDL---QVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPS 608
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ Y + ++ C+ + LL + + GY+P ++S C G ++ +E+
Sbjct: 609 EDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFG 668
Query: 315 AVLDK 319
+L K
Sbjct: 669 DLLLK 673
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + + C G ++ L+++L GL DS+ +S + YC + A + + +
Sbjct: 76 TTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFV-LMP 134
Query: 354 LKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELR 411
L+G L A TY LL GL G + EA+ +F M+ + + +V LC
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A +E + G +P+ Y +I G+
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGY 222
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 191/430 (44%), Gaps = 28/430 (6%)
Query: 25 KGLFMD-----GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGLF + V ++ YG P A NA++ R + A+ + M G S
Sbjct: 120 KGLFTSKRTEKAVRVMEILEQYGD-PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFS 178
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDR 134
P+ T++++ LC GK ++ L ++D + + + Y ++I+ G A
Sbjct: 179 PDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRL 238
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L+EM + R L P TY+ I+ G K + DR + P L
Sbjct: 239 LDEMMS-RGLQPDMYTYNVIVRGMC---KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLL 294
Query: 195 LS---DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ G+ ++MI K C+ I T ++ +L ++G+ EA+ + ++ E+G+
Sbjct: 295 NEGRWEAGERLMSDMIVK-GCEPNIV----TYSVLISSLCRDGKAGEAVDVLRVMKEKGL 349
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ CKE + + G + D++ G++P + + + S C KG+ E
Sbjct: 350 NPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALN 409
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV--ATYDVLLDG 369
+ + + G ++ +++ S+ DK AL + +E L +D TY+ L+
Sbjct: 410 IFKKLEEVGCPPNASSYNTMFGALWSSG--DKIRALTMILEMLSNGVDPDRITYNSLISS 467
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L +DG ++EA+ + M+ + + S+ IV+ LC + A++ M+ G +P+
Sbjct: 468 LCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPN 527
Query: 429 EATYKQVISG 438
E TY ++ G
Sbjct: 528 ETTYTLLVEG 537
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
RD+ + +N LCK + E L +V+RGY P + ++ + + ++ ++
Sbjct: 76 RDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM 135
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+L++ DSF ++++ +C + + D A + ++++ S DV TY++L+ L
Sbjct: 136 E-ILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCAR 194
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G+++ A+++ D + E + ++ I++ + AM+ DEM+ G +PD TY
Sbjct: 195 GKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTY 254
Query: 433 KQVISGF 439
++ G
Sbjct: 255 NVIVRGM 261
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 110/277 (39%), Gaps = 50/277 (18%)
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
Y E + KR + L C ++K L R ++A+++ ++ + G D D +A+
Sbjct: 98 YFLEQMVKRGYKPDVIL----CTKLIKGLFTSKRTEKAVRVMEILEQYG----DPDSFAY 149
Query: 262 VNVL---CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
V+ C+ + + ++ + RG+ P + + + S C +GK +++ +L+
Sbjct: 150 NAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLE 209
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+ L+E + ID A+ L ++ D+ TY+V++ G+ K G ++
Sbjct: 210 DNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVD- 268
Query: 379 AVRIFDYMKELKVVSSS------------------------------------SFVIVVS 402
R F+++ L S ++ +++S
Sbjct: 269 --RAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLIS 326
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC + +A+ M + G PD Y +IS F
Sbjct: 327 SLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAF 363
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 194/474 (40%), Gaps = 55/474 (11%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
D + VL Y+ + + L+ + +M ++G P + + NALL+A N + A
Sbjct: 79 DVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLA 138
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD------------------------- 106
G+ PN T++++ +I + +F GLLD
Sbjct: 139 YFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSG 198
Query: 107 --------------SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
G+ VM YN++ID + K+GD+ + + G + P TY
Sbjct: 199 DLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTY 258
Query: 152 SSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+ +++G R E E+ +R+ E L L I L D+G A +
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSL------ICGLCDVGNVDGAVEV 312
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+K + + T +L + G++KE+ +++ ++ + S Y F+ L +
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVS-YNIFIRGLFE 371
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ EE + + RG + + C G + ++L D G LD+F
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
SS+++ ++D+A+ + +++K L + L++G + ++EEA+ F M
Sbjct: 432 YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM- 490
Query: 388 ELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E K S + S+ +++ LC + A EML+ KPD TY ++ G
Sbjct: 491 ETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGL 544
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 195/509 (38%), Gaps = 93/509 (18%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+D + D S V++ G + LEV+ M G VP V N ++D +++ +
Sbjct: 178 KDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQ 237
Query: 66 ASCLYGAMVRDG-VSPNKFTWSLVAQILCRSGKFE-----------------------VV 101
++ +V+ V PN T++++ LC+ G+F+ ++
Sbjct: 238 GKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLI 297
Query: 102 LGLLDSG-------IYSSVM----------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
GL D G +Y ++ YN +++ + + G +F+ M G+
Sbjct: 298 CGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMM--GKEN 355
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND-----YVIQKLSDMG 199
+Y+ + G K E + + L+ + SG D +I L G
Sbjct: 356 CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRG-------SGADSTTYGVLIHGLCKNG 408
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT------- 252
A I K A D +L ++ LSK+GRV EA+ I H + + G
Sbjct: 409 HLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468
Query: 253 ------VRDS----------------------DYYAFVNVLCKEHQPEEVCGLLRDVVER 284
VR S Y +N LCK + + +++++E+
Sbjct: 469 PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK 528
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
+ P + S + C K L VL KGL D + LM CS +I+ A
Sbjct: 529 DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDA 588
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSR 403
+ L+ +++ ++ T++ L+DGL+K E A I+ M K S+ I +
Sbjct: 589 LLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKG 648
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATY 432
LC + + D+ LK G P T+
Sbjct: 649 LCSCGRISDGIALFDDALKNGILPTSITW 677
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 12/261 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A S ++D S +G + L + M YG + CN L++ R +++ A C + M
Sbjct: 431 AYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM 490
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
G SP +++ + LC++ +F + + + Y+L++D +
Sbjct: 491 ETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKI 550
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + ++ + L P + ++ ++ G K E + + M + LP L +
Sbjct: 551 DMALNLWRQVLV-KGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPN--LVTH 607
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLI 246
+ ++ L + A +I+ AC K Q D + LK L GR+ + I ++
Sbjct: 608 NTLMDGLYKARECEMASVIW--ACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDA 665
Query: 247 SERGITVRDSDYYAFVNVLCK 267
+ GI +Y V + K
Sbjct: 666 LKNGILPTSITWYILVRAVLK 686
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 117/292 (40%), Gaps = 48/292 (16%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE-- 248
++++LSD I + +K + +D +LKA +K EA+ + + E
Sbjct: 49 ILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIF 108
Query: 249 ----------------------------------RGITVRDSDYYAFVNVLCKEHQPEEV 274
GI Y + + K+ Q E
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
GLL + + P + G E+ + ++GL+ D C + +++
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228
Query: 335 YCSNRQIDKAIALHIKIEKLKGSL---DVATYDVLLDGLFKDGRMEEAVRIFDYMK---- 387
+ ++ D I +KGS +V TY+V+++GL K GR +E++ +++ MK
Sbjct: 229 FF--KRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E+ + + SS ++ LC + + A++ + EM+K D TY +++GF
Sbjct: 287 EMDLFTYSS---LICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGF 335
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 196/476 (41%), Gaps = 53/476 (11%)
Query: 15 LSLVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+ VL+ YS+ GL + L+VYR M G P++ +AL+ AL ++ +I
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVID 120
L M G+ PN +T+++ +IL R+GK + G+L D+G V+ Y ++ID
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 305
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G A + +M + P TY ++LD + + M L
Sbjct: 306 ALCNAGKLNNAKELFLKM-KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYL 364
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I L +GK A + + T ++ L + R+ EA+
Sbjct: 365 PD--VVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++++ + G+ Y F++ K + + + G +P + + + S
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSL 482
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+G+ +E +E + + GL D+ + LM Y ++D AI L ++E+ +V
Sbjct: 483 AEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEV 542
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV---------------------------- 392
+ L+D L+K R++EA ++F MKE+K+
Sbjct: 543 VIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKG 602
Query: 393 --------SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ SF ++ LC E+ A+K M +M PD TY VI G +
Sbjct: 603 MIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLI 658
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 176/429 (41%), Gaps = 69/429 (16%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ ++++ M+ P V N LL L ++ ++ A+ L+ M+ D PN +++ +
Sbjct: 560 EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619
Query: 90 QILCRSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
LC++G+ ++ L +L D Y++V+Y L+ K+ AF ++M
Sbjct: 620 DCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLI-----KENRVNYAFWLFHQM- 673
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK------KLLPKHFLSGNDYVIQ 193
+ + P + T ++L G + + E + R+ V + + G I
Sbjct: 674 -KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGG----IL 728
Query: 194 KLSDMGKT--YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLISERG 250
+++G++ +A ++ C++ D ++K L K G+ +A ++ L
Sbjct: 729 IEAEIGQSILFAESLVCNTICED-----DSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFC 783
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
IT Y + ++ L K E GL + G P + F+ + GK KE+
Sbjct: 784 ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L +L +G ++ + ++ + +DKAI L+ + S TY L+DGL
Sbjct: 844 DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGL 903
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K GR+EEA + F+ EML G P+
Sbjct: 904 LKLGRLEEAKQFFE----------------------------------EMLDYGCMPNCP 929
Query: 431 TYKQVISGF 439
Y +++GF
Sbjct: 930 LYNILMNGF 938
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 158/380 (41%), Gaps = 49/380 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD +S G E + M G++P V L+DAL + ++ A M + G
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAF 132
V+PN T++ + L R + + L L +S G+ ++ Y L ID+Y K G+ G A
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAI 457
Query: 133 DRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+M NG + P ++ L
Sbjct: 458 KTFEKMKTNG--IVPNIVACNASL------------------------------------ 479
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISER 249
L++ G+ A+ F +K L D T +++ K GRV +AI++ + E
Sbjct: 480 -YSLAEQGRLEEAKEFFNGL--KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEEN 536
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + ++ L K + +E + + + E P + + +A +G+ +E
Sbjct: 537 GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L ++ ++ ++L++ C N ++D A+ + ++ ++ DV TY+ ++ G
Sbjct: 597 TALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYG 656
Query: 370 LFKDGRMEEAVRIFDYMKEL 389
L K+ R+ A +F MK++
Sbjct: 657 LIKENRVNYAFWLFHQMKKV 676
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 196/469 (41%), Gaps = 66/469 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G ++ + L +D Y G ++ + M+ G VP + ACNA L +L Q + A
Sbjct: 432 GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEA 491
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDF 121
+ + + G++P+ T++++ + ++G+ + + LL ++G V+ N +ID
Sbjct: 492 KEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDT 551
Query: 122 YSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
K A F R+ EM L P TY+++L G + + + + + M+
Sbjct: 552 LYKADRVDEAWKMFQRMKEM----KLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P + +S N ++ L G+ A + R + T ++ L KE RV
Sbjct: 608 -CPPNTISFNT-LLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY 665
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP----CAMELS 294
A ++H + + V DY +C LL V++ G I A E
Sbjct: 666 AFWLFHQMKK----VIYPDYVT-------------LCTLLPGVIKDGRIEDAFRVAKEFV 708
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKG------LLLDSFCCSS----------LMEYYCSN 338
V W E+L+ +L + L +S C++ L+++ C +
Sbjct: 709 HHVGDHADGSFW---EDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKH 765
Query: 339 RQIDKAIALHIKIEK---LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL----KV 391
+ A + +K+ K + SL+ Y+ L+DGL K E A +F MK V
Sbjct: 766 GKAVDAYNVFLKLTKSFCITPSLE--AYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + F+ + + +KEL ++EML G KP+ T+ VI G +
Sbjct: 824 FTYNLFLDALGKSGKIKEL---FDLYEEMLFRGCKPNTITHNIVIFGLV 869
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 160/415 (38%), Gaps = 76/415 (18%)
Query: 26 GLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G +D V+ ++ + + P++ A N+L+D L + +A L+ M G +P+ FT
Sbjct: 766 GKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFT 825
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
YNL +D K G FD EM R
Sbjct: 826 ------------------------------YNLFLDALGKSGKIKELFDLYEEMLF-RGC 854
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T++ ++ G K+ D+ + L + +SG+ S TY
Sbjct: 855 KPNTITHNIVIFG---LVKSNSLDKAIDLYYD-------LMSGD------FSPTPWTY-- 896
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
G ++ L K GR++EA Q + + + G Y +N
Sbjct: 897 -------------------GPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
K+ E C L R +V+ G P S V C GK + + GL D
Sbjct: 938 FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
C + ++ ++++++A++L ++ + D+ TY+ L+ L G +EEA ++++
Sbjct: 998 LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELR----KAMKNHDEMLKMGHKPDEATYKQV 435
EL++ V + L + +A + +M+ G +P+ T+ Q+
Sbjct: 1058 ---ELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 124/323 (38%), Gaps = 44/323 (13%)
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++ F K G A++ ++ +TP Y+S++DG + TE++ + M
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P F T L AL K G++K
Sbjct: 818 GCTPDVF-------------------------------------TYNLFLDALGKSGKIK 840
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
E +Y + RG + + L K + ++ L D++ + P +
Sbjct: 841 ELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLI 900
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
G+ +E ++ +LD G + + + LM + ++ A L ++ K
Sbjct: 901 DGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIR 960
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS----FVIVVSRLCHLKELRKA 413
D+ +Y +++D L G++++A+ Y +ELK+ + ++++ L + + +A
Sbjct: 961 PDLKSYSIMVDCLCMVGKVDDALH---YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEA 1017
Query: 414 MKNHDEMLKMGHKPDEATYKQVI 436
+ DEM G PD TY +I
Sbjct: 1018 LSLFDEMRNRGITPDLYTYNALI 1040
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 108/251 (43%), Gaps = 5/251 (1%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V++ +SD + ++ F + ++ +TC +L+ L RV++ + +++L+ ++
Sbjct: 95 VLKSISDPNQAFS---FFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQ 151
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
I + Y VL E L + + G++ + G +E
Sbjct: 152 IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREA 211
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++ ++ +G+ S+LM R I+ + L ++E L ++ T+ + +
Sbjct: 212 LKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRI 271
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L + G+++EA I M + ++ +++ LC+ +L A + +M HKPD
Sbjct: 272 LGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD 331
Query: 429 EATYKQVISGF 439
TY ++ F
Sbjct: 332 RVTYITLLDKF 342
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 180/393 (45%), Gaps = 9/393 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV- 74
+++LD + +G + L + +MM G VP A LL+ L + +++ AS ++ ++
Sbjct: 564 TILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIIC 623
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDFG 129
++G+ + ++ + + G+ + L+ ++ +Y SS YN+++ Y KKG
Sbjct: 624 KEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLS 683
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+M + P TY ++ G Y E++ + + MV + + P + D
Sbjct: 684 RTLYLYRDMVK-EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNL--AFD 740
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I+ S+ K A +F + T M+ L ++ ++++ +I H + E
Sbjct: 741 ILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVES 800
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + + Y A +N C+ + L D+ G +P + S V C GK +E
Sbjct: 801 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 860
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ S+++ G++ ++LM C +ID A L +E +DV TY+VL+ G
Sbjct: 861 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 920
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVS 402
L + +A+ +++ MK ++ + + I ++
Sbjct: 921 LCNKKCICDALDLYEEMKSKGLLPNITTYITLT 953
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 175/401 (43%), Gaps = 12/401 (2%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVL 102
V++ N ++D+ ++ + A +Y MVR G P+ T+ + + LC+ G E ++
Sbjct: 455 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 514
Query: 103 GLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
LL+ I + L++ K G A D +M RN+ P TY+ +LDG +
Sbjct: 515 YLLEKACAIDEKTLNTLLVGI-CKHGTLDEALDLCEKMVT-RNILPDTYTYTILLDGFCK 572
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA-CDEKIELQ 219
K + ++ +M+EK L+P ++ L + G+ AA +F+ C E +
Sbjct: 573 RGKVVPALILLQMMLEKGLVPDTI--AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 630
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
M+ K G++ E ++ + E + + Y ++ K+ Q L R
Sbjct: 631 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 690
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D+V+ G P + + C G + + L ++ +G+ D+ L++ +
Sbjct: 691 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 750
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
++ A+ L ++ L S TY +++GL + ++++ I M E + + ++
Sbjct: 751 KMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYI 810
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C + ++ A + ++M +G P E ++ G
Sbjct: 811 ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGL 851
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 177/415 (42%), Gaps = 23/415 (5%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
V+ CN +L++L Q ++ A + M ++ PN T++ + + G+ + L +LD
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILD 288
Query: 107 ----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+GI + + YN++ID K A+ L M NLTP +Y++++ G
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGE 347
Query: 162 EKTEVSDRIVGLMVEKKLLPK---HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
K ++ I M+ + L P + + Y +D + EM ++
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407
Query: 219 QDDTCGCML-----------KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
CML AL EG + EA Q +S I+ + + ++ C+
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 467
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E + ++V G+ P + C G + +E + +L+K +D
Sbjct: 468 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 527
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++L+ C + +D+A+ L K+ D TY +LLDG K G++ A+ + M
Sbjct: 528 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML 587
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML-KMGHKPDEATYKQVISGFM 440
E +V + ++ +++ L + +++ A E++ K G D Y +++G++
Sbjct: 588 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 642
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 115/304 (37%), Gaps = 59/304 (19%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS------------------- 231
++ L + K+ + K + D K L TC +L +L
Sbjct: 201 ILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR 260
Query: 232 ---------------KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
K+GR K A++I + + GI Y ++ LCK +
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL+ + E P + + G+GK + + +L + L ++L++ YC
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380
Query: 337 SNRQIDKA----IALHI------KIEKLKGSL----------DVATYDVLLDGLFKDGRM 376
N + D+A + I ++ K K L DV TY L++ +G +
Sbjct: 381 RNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGMI 436
Query: 377 EEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
EA + YM +K+ +SF ++ C + +A +D M++ G PD TY +
Sbjct: 437 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 496
Query: 436 ISGF 439
+ G
Sbjct: 497 LRGL 500
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 136/358 (37%), Gaps = 91/358 (25%)
Query: 17 LVLDCYSHKGLFMDGL-------EVYRMMR------VYGFVPAVSACNALLDALYRQNEI 63
L DC ++ + M+G E+ R+MR VY P+ ++ N L+ ++ ++
Sbjct: 627 LYADCIAYNSM-MNGYLKGGQINEIERLMRNMHENEVY---PSSASYNILMHGYIKKGQL 682
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLV 118
LY MV++G+ P+ T+ L+ LC G E+ + L+ + V ++++
Sbjct: 683 SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDIL 742
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I +S+K A + M +++P TY ++++G R + S I+ MVE
Sbjct: 743 IKAFSEKSKMSNALQLFSYM-KWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESG 801
Query: 179 LLPK--HFLS-------------------------------GNDYVIQKLSDMGKTYAAE 205
L PK H+++ +++ L GK A
Sbjct: 802 LQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAI 861
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++F + T ++ L KE ++ +A + L+ G+ V Y + L
Sbjct: 862 IVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 921
Query: 266 CKE---------HQPEEVCGLL--------------------------RDVVERGYIP 288
C + ++ + GLL +D+ +RG +P
Sbjct: 922 CNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV--ASQCG 302
++ + G+ Y V++L + P + +LR + G+ C+ S + S+C
Sbjct: 98 IVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGF-SCSAIFSSLLRTISRCD 156
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLME--------YYCSN-----RQIDKA--IAL 347
V+ L++A + +G +LD+ M+ + C+N I+K+ + L
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWL 216
Query: 348 HIKIEKL--KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
+K E L K LDV T +++L+ L G++ +A + MK ++ ++ ++ +++
Sbjct: 217 FLK-ESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYV 275
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ D+M K G + D TY +I
Sbjct: 276 KKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 192/437 (43%), Gaps = 24/437 (5%)
Query: 17 LVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
LV Y+ + L+++ RM ++G P + + N+LL+AL N+ A +
Sbjct: 58 LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGA 130
G+SPN T++++ +I CR +F+ LL+ G V Y +I+ +K G
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARR----YEKTEVSDRIVGLMVEKKLLPKHFLS 186
A +EM R +TP + Y+ ++DG + +E+ +R++ +P +
Sbjct: 178 ALKLFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY--- 233
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYH 244
+ +I L GK + I+ R +K E D T ++ L G + A ++Y
Sbjct: 234 --NVMINGLCKCGKFDESFEIWHRM--KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 289
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++E G++ Y +N + + EE C L V+E+ + + +
Sbjct: 290 EMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKVMEKEGCRTVVSYNILIRGLFENA 348
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K E + + +K DS L+ C N ++KA+++ + E +G LD Y
Sbjct: 349 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLK 422
+++GL ++GR++E + D M + + +V V++ +L A++ M+
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTK-HGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467
Query: 423 MGHKPDEATYKQVISGF 439
G P TY +I+G
Sbjct: 468 KGCFPTVVTYNTLINGL 484
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 205/490 (41%), Gaps = 74/490 (15%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
G+ D S +++ + G D L+++ M G P V+ N L+D +++ +I
Sbjct: 152 GQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 211
Query: 65 LASCLYGAMVR-DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSV 113
AS ++ +++ V PN +++++ LC+ GKF+ + D YS++
Sbjct: 212 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 271
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDG---ARRYE------- 162
++ L G+ A EM NG ++P Y+++L+G A R E
Sbjct: 272 IHGLC-----GSGNLDGATRVYKEMAENG--VSPDVVVYNTMLNGYLRAGRIEECLELWK 324
Query: 163 -------KTEVSDRIV--GLMVEKK---------LLPK--------------HFLSGNDY 190
+T VS I+ GL K LLP+ H L N Y
Sbjct: 325 VMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 384
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ + LS I + A + + +L M+ L +EGR+ E + +++ G
Sbjct: 385 LNKALS----------ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
A +N + + E+ ++V +G P + + + ++ E
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 494
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L+ +L KG + S LM C +++D A+ L + + DV +++++ GL
Sbjct: 495 ALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G++E+A++++ MK+ V + + ++ +++ +A K D +L+ G +PD
Sbjct: 555 CSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDI 614
Query: 430 ATYKQVISGF 439
+Y + G
Sbjct: 615 ISYNITLKGL 624
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 168/421 (39%), Gaps = 44/421 (10%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
K F E+ M GF P V + L+++L + + A L+ M GV+P+
Sbjct: 137 KKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD--- 193
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ C YN++ID + KKGD A + + G ++
Sbjct: 194 ------VAC---------------------YNILIDGFFKKGDILNASEIWERLLKGPSV 226
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P +Y+ +++G + K + S I M KK L +I L G A
Sbjct: 227 YPNIPSYNVMINGLCKCGKFDESFEIWHRM--KKNERGQDLYTYSTLIHGLCGSGNLDGA 284
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++K + + ML + GR++E ++++ ++ + G S Y +
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRG 343
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L + + +E + + E+ +M V C G + +L + LD
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+F SS++ C ++D+ + ++ K + + +++G + ++E+A+R F
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD------EMLKMGHKPDEATYKQVISG 438
M VS F VV+ + L KA + + EML+ G KP+ TY +++G
Sbjct: 464 NM-----VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518
Query: 439 F 439
Sbjct: 519 L 519
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GL 104
A +++++ L R+ + + + M + G PN + + V R+ K E L +
Sbjct: 406 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM 465
Query: 105 LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
+ G + +V+ YN +I+ SK F A+ + EM + P TYS +++G + +K
Sbjct: 466 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ-KGWKPNMITYSLLMNGLCQGKK 524
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+++ + +EK P + ++ +I L GK A ++ T
Sbjct: 525 LDMALNLWCQALEKGFKPD--VKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+++ K + A +I+ I + G+ Y + LC H+ + G L D V+
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 642
Query: 284 RGYIPCAMELSRFV 297
RG +P A+ + V
Sbjct: 643 RGVLPTAITWNILV 656
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 148/366 (40%), Gaps = 18/366 (4%)
Query: 29 MDG-LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+DG VY+ M G P V N +L+ R I L+ M ++G ++++
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 339
Query: 88 VAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + L + K + + + + S+ Y +++ K G A L E NGR
Sbjct: 340 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 399
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV----IQKLSDM 198
F+ YSS+++G R + D + G++ + + KH N YV I
Sbjct: 400 GDLDTFA-YSSMINGLCREGRL---DEVAGVLDQ---MTKHGCKPNPYVCNAVINGFVRA 452
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
K A F + T ++ LSK R EA + + ++G Y
Sbjct: 453 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITY 512
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N LC+ + + L +E+G+ P + + C GK ++ +L S +
Sbjct: 513 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 572
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+ + + ++LME + R ++A + I + D+ +Y++ L GL R+ +
Sbjct: 573 RNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISD 632
Query: 379 AVRIFD 384
AV +
Sbjct: 633 AVGFLN 638
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 122/292 (41%), Gaps = 12/292 (4%)
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
SI D R+ + + ++++ PK L + Y + D M C
Sbjct: 28 SIFDSVTRFPGYSHTPYVFHHILKRLFDPK--LVAHAYAKNSMPDQALDIFQRMHEIFGC 85
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
I + +L AL + + EA + G++ Y + + C++ Q +
Sbjct: 86 QPGIR----SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFD 141
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ LL + +G+ P + S G + +L + ++G+ D C + L+
Sbjct: 142 KAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 201
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ + I A + ++ LKG ++ +Y+V+++GL K G+ +E+ I+ MK+
Sbjct: 202 DGFFKKGDILNASEIWERL--LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 259
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ ++ LC L A + + EM + G PD Y +++G++
Sbjct: 260 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 311
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 13/280 (4%)
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
K+ R++ L+ +K P LS D V + Y I KR D K+
Sbjct: 6 KSLSPKRVIKLLKSEKN-PHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKL------ 58
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISE-RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
+ A +K +A+ I+ + E G Y + +N L + ++ +E
Sbjct: 59 ---VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 115
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P + + C K ++ + +ELL+ + +G D F +L+ N +
Sbjct: 116 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYM 175
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVI 399
A+ L ++ + + DVA Y++L+DG FK G + A I++ + + V + S+ +
Sbjct: 176 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC + ++ + M K D TY +I G
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 275
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 178/408 (43%), Gaps = 19/408 (4%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
VP V N ++D L ++ E+ A L+ M G SP+ T++ + + G E V
Sbjct: 197 VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256
Query: 104 LLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
L+ SG + V+ YN +I+ +SK G A+ EM + + T+S+ +D
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM-KRQGVVANVVTFSTFVDAF 315
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ + + ++ M + ++P F + ++ G+ A ++ + +
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTS--LVDGTCKAGRLDDAIVLLDEMVHQGLVP 373
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T M+ L KEG+V EA + L+ G+ + Y ++ + E LL
Sbjct: 374 NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLL 433
Query: 279 RDVVERGYIPCAMEL-----SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ +G MEL + C K E + LL + GL ++ +++M+
Sbjct: 434 NQMKNKG-----MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMD 488
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-V 392
+ +A+AL KI +V TY L+DGL K G + EA+ F+ M+EL +
Sbjct: 489 ALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDP 548
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ ++ C + L KAM +EM+ G D+ Y +I G+M
Sbjct: 549 NVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYM 596
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 180/438 (41%), Gaps = 29/438 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D Y G + ++ MR G V NAL++ + + A +G M R G
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAF 132
V N T+S C+ G + + L +M Y ++D K G A
Sbjct: 301 VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 360
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM----------VEKKLLPK 182
L+EM + + L P TY+ ++DG + K +D ++ LM + L+
Sbjct: 361 VLLDEMVH-QGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
HF++ N L + K ++ +EL G ++ L K+ +V EA +
Sbjct: 420 HFMNNNSERALDLLNQMK------------NKGMELDVSLYGTLIWGLCKDQKVDEAKSL 467
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
H ++ G+ Y ++ L K + E LL +++ G+ P + + C
Sbjct: 468 LHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCK 527
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G E + + + GL + ++L++ +C ++KA+ L ++ SLD
Sbjct: 528 AGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVV 587
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
Y L+DG K +++A + M E + + + +S C++ +++A EM+
Sbjct: 588 YTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647
Query: 422 KMGHKPDEATYKQVISGF 439
G PD+ Y +I +
Sbjct: 648 GTGITPDKTVYNCLIRKY 665
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 177/405 (43%), Gaps = 52/405 (12%)
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF---GAAFD 133
V PN T + + L R+ + +V L D +V +N+VIDF K+G+ A F
Sbjct: 165 VPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFV 224
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
R+ M +P TY+S++DG + E +++V M K ++ N +I
Sbjct: 225 RMKAM----GCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM-RKSGCAADVVTYN-ALIN 278
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S G+ A F + + T + A KEG V+EA++++ + RG+
Sbjct: 279 CFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMP 338
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE--- 310
+ Y + V+ CK + ++ LL ++V +G +P + + V C +GK E +
Sbjct: 339 NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVL 398
Query: 311 --------------------------------ELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+LL+ + +KG+ LD +L+ C +
Sbjct: 399 SLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKD 458
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSS 394
+++D+A +L K+ + Y ++D LFK G+ EAV +I D + VV
Sbjct: 459 QKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVV-- 516
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ LC + +A+ + ++M ++G P+ Y +I GF
Sbjct: 517 -TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 171/386 (44%), Gaps = 18/386 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S +D + +GL + ++++ MRV G +P +L+D + + A L M
Sbjct: 307 TFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDF 128
V G+ PN T++++ LC+ GK + VL L++ G + ++Y +I + +
Sbjct: 367 VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNS 426
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D LN+M N + + S Y +++ G + +K + + ++ M L P +
Sbjct: 427 ERALDLLNQMKN-KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTT 485
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L GK A + + D + T ++ L K G + EAI ++ + E
Sbjct: 486 --IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y A ++ CK + L+ +++++G M L + V + G K+
Sbjct: 544 LGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKG-----MSLDKVVYTSLIDGYMKQ 598
Query: 309 VE-----ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
L + +++ GL LD +C + + +C+ + +A + ++ + D Y
Sbjct: 599 ANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVY 658
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ L+ K G MEEA + + M+ +
Sbjct: 659 NCLIRKYQKLGNMEEASSLQNEMESV 684
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 180/418 (43%), Gaps = 18/418 (4%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
L + + R +R YG P+ ACNA+L L I L L N +++
Sbjct: 215 LCLPSAPLLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGL--------PDKNVCSYN 266
Query: 87 LVAQILCRSGKFEVVLGLLD--SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
++ ++LC +G+ E L D + V Y ++I Y G+ A L++M R +
Sbjct: 267 ILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDMV-ARGV 325
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTY 202
P + Y+S++ A +K VSD + +VE + K L Y V+ + G
Sbjct: 326 EPNATVYTSVV--ALLCDKGRVSDALT--VVEDMVHHKVILDEAVYTTVLSGFCNKGDLV 381
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+A F + + T ++ L + G +KEA ++ + R + V + Y V
Sbjct: 382 SARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ CK + E + +V+RG P + + C +G + ELL + +KGL
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
L++ +SL+ C +D+A+ ++ DV TY L+D L K G ++ A +
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + + + ++ ++++ C + K + ML+ P+ TY ++ +
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQY 619
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 175/428 (40%), Gaps = 61/428 (14%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
SDAL++V D HK + + VY + + GF CN + ++ A +
Sbjct: 346 SDALTVVEDMVHHKVILDEA--VYTTV-LSGF------CN--------KGDLVSARRWFD 388
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKG 126
M R G++ + T++ + LCR+G+ + +L + V Y +++D Y K+G
Sbjct: 389 EMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRG 448
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
AF N M R + P TY+++ DG
Sbjct: 449 KMAEAFQVHNTMVQ-RGVAPNVVTYTALSDG----------------------------- 478
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L G AA + ++ +EL T ++ L K G + +A++ +
Sbjct: 479 --------LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G+ Y ++ LCK + + LL+++++ G P + + + C G+
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ ++LL +L+K + ++ +SLM+ YC + ++ + + TY++L
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ G K M+EA + M E +++SS+ ++ L K+ +A K +M K G
Sbjct: 651 IKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGF 710
Query: 426 KPDEATYK 433
+ Y
Sbjct: 711 TAEPDVYN 718
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 131/322 (40%), Gaps = 43/322 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y +G + +V+ M G P V AL D L +Q +++ A+ L M
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
G+ N T++ + LC++G + + + +G+ V Y +ID K G+
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L EM + + P TY+ +++G + E +++ M+EK + P + +
Sbjct: 558 AHDLLQEMLDN-GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPN--ATTYNS 614
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA--------------------- 229
++++ + I+K C +E ++T ++K
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Query: 230 --------------LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
L+K+ + EA +++H + + G T Y +++ E E
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATL 734
Query: 276 GLLRDVVERGYIPCAMELSRFV 297
L ++VE + E+ + V
Sbjct: 735 ALCDELVEASIVKSKAEMDQDV 756
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 160/386 (41%), Gaps = 8/386 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ VL + +KG + + M+ G L++ L R E++ A + M+
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
+ ++ T++++ C+ GK F+V ++ G+ +V+ Y + D K+GD A
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQA 487
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L+EM N + L TY+S+++G + + + R + M L P +
Sbjct: 488 ANELLHEMSN-KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTT-- 544
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ A + + D I+ T ++ GRV+ ++ + E+
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I + Y + + C + + + + + R P + + C KE +
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ +++KG L + S+L+ ++ +A L + K + + Y+ +D
Sbjct: 665 YFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFN 724
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSS 396
F + +E + + D + E +V S +
Sbjct: 725 FNEDNLEATLALCDELVEASIVKSKA 750
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 187/450 (41%), Gaps = 37/450 (8%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++++ C+ L + + GF P + N LL L ++ + A L+ M
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
+ PN T++ + LCR G+ + LLD + + + Y ++D K GD
Sbjct: 77 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A + L +M ++ P YS+I+DG + + + + M +K + P +
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD--IVTY 190
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I GK A+ + + KI T ++ AL KEG + A + +
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE------------------RGYIPCA 290
G+ ++ LC G L+D +E G P
Sbjct: 251 SGVCPNVVTCNTLLDGLCDS-------GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ ++ +GK+ E EEL + +G++ D+ SS++ C ++D+A +
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ S ++ T++ L+ G K G +++ + +F M +V+++ +++ ++ +
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ EM+ G PD T + +++G
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 168/376 (44%), Gaps = 27/376 (7%)
Query: 83 FTWSLVAQILCRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNE 137
++++++ + C K L L G + + V +N ++ + A D ++
Sbjct: 16 YSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
MC P T++++++G R + + ++ MVE L P G ++ +
Sbjct: 76 MCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT--IVDGMCK 128
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
MG T +A + ++ +E ++ D ++ L K+GR +A ++ + ++GI
Sbjct: 129 MGDTVSALNLLRKM-EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N C + E LL++++ R P + S + + +G ++LL
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD-----------VATYD 364
++ G+ + C++L++ C + ++ A+ + ++K +D V TY+
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+L+ GL +G+ EA +++ M +V + ++ +++ LC L +A + D M
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 424 GHKPDEATYKQVISGF 439
P+ T+ +I+G+
Sbjct: 368 SFSPNIVTFNTLITGY 383
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
++G F++ E+Y M G VP +++++ L +Q+ + A+ ++ +M SPN
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374
Query: 84 TWSLVAQILCRSGKFEVVLGLL-DSG----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + C++G + L L + G + +++ Y +I + K G+ + D EM
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ + P T ++L G E+ + + + ++ E ++ H L G
Sbjct: 435 IS-SGVYPDTITIRNMLTGLWSKEELK---KALAMLEELQMSMDHHLVG 479
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 182/440 (41%), Gaps = 45/440 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G A S ++ + G ++V+ M G P + N LL L+R +I A
Sbjct: 74 GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEA 133
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
L+ +M G P+ T++ + LC+ K LD ++
Sbjct: 134 RELFRSMNSRGCKPDVVTYNTMIAGLCKWKK-------LDEAVF---------------- 170
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
L E +++P F TY++++D ++ + + + + M E
Sbjct: 171 --------LLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTE--P 220
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK-EGRVKEAIQIYHL 245
+ KL GK A ++ C + + + D+T ++ LSK +G EA ++
Sbjct: 221 AYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTE 280
Query: 246 ISERGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + I D+YA+ +N LCK +P E + +++ RG P + + +
Sbjct: 281 MMGKKIA---PDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLS 337
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
K ++ EL +LD+G L D+ + ++ +C+N ++A L + K L+ T
Sbjct: 338 TAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWT 397
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYM---KELKVVSSSSFV--IVVSRLCHLKELRKAMKNH 417
Y+ ++ G KD A +F M K KV + + F I++S LC ++ +A K
Sbjct: 398 YNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLL 457
Query: 418 DEMLKMGHKPDEATYKQVIS 437
M G P ++ ++S
Sbjct: 458 SAMRDKGFVPSLKIWEVLLS 477
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ CK E+ LR++ E G+ P S V S C G + ++ + +
Sbjct: 47 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMP 106
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
KG D + L+ R+I +A L + DV TY+ ++ GL K +++
Sbjct: 107 AKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 166
Query: 378 EAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
EAV + + MK+ V S +FV + + HL + + + ++ KM P
Sbjct: 167 EAVFLLERMKQEDV--SPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGP 214
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 141/342 (41%), Gaps = 11/342 (3%)
Query: 104 LLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
+L++G++ ++++YN +I K G A L M ++ P +Y+ I+DG Y
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRM--PQHCAPNVVSYNIIIDG---YC 55
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
K ++ + + E + L H + + Y ++Q G A +F + E
Sbjct: 56 KARNIEKALAFLREMEEL-GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDI 114
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+L L + ++ EA +++ ++ RG Y + LCK + +E LL
Sbjct: 115 VNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLER 174
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + P + + + C + ++ E+ + + S L +
Sbjct: 175 MKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGK 234
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFK-DGRMEEAVRIFDYMKELKVVSS-SSFV 398
+ +A ++ + + + TY +++ GL K DG EA ++ M K+ ++
Sbjct: 235 LVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYS 294
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
I+++ LC + +A + EM G P TY ++ G +
Sbjct: 295 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLL 336
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 152/381 (39%), Gaps = 25/381 (6%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
M+ G+ PN ++ + LC++G E L + +V+ YN++ID Y K +
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNI 60
Query: 129 GAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A L EM G TP YSSI+ + + + M K P +
Sbjct: 61 EKALAFLREMEELGHPPTP--HAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD--IVN 116
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ ++ L K + A +F+ + T M+ L K ++ EA+ + +
Sbjct: 117 FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMK 176
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK-GKW 306
+ ++ Y ++ LCK + ++ + + E G C + ++ + GK
Sbjct: 177 QEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAE-GPCACTEPAYSVLFNKLQRAGKL 235
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL-------KGSLD 359
E + S + K + C + Y + K +++ KL K + D
Sbjct: 236 VEASRVYSDMCRKNV------CMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPD 289
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
Y +L++GL K R EA +F M+ + + ++ ++ L +L+ AM+
Sbjct: 290 FYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTY 349
Query: 419 EMLKMGHKPDEATYKQVISGF 439
ML G PD +Y +I GF
Sbjct: 350 FMLDQGRLPDTCSYNLMIRGF 370
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L + G D E+Y+ M V + N LLD + R+ + A M
Sbjct: 474 VLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDT 533
Query: 77 GVSPNKFTWSLVAQILCRSGK 97
G+ P+KFT+ + LC GK
Sbjct: 534 GIVPDKFTYDKLVVGLCWQGK 554
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 172/389 (44%), Gaps = 17/389 (4%)
Query: 11 QSDAL---SLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
Q DA+ +L+ C+ G F + V+ +++R G P ++ N +LD L + + A
Sbjct: 226 QPDAVCYNALLGGCF-RNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDF 121
++ MV + P+ T+ + LCRS + V ++ +G+ V +YN ++
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344
Query: 122 YSKKGDFGAAFDRLNEMCNG--RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ G G A+ + M RN+T + DG + T++ + ++EK
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWE-----LLEKDD 399
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ +I L + G + I + A EL + + M+ L K+GR+ +A
Sbjct: 400 SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDA 459
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++Y IS Y A +N C+ + + + + E P + + +
Sbjct: 460 VKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHG 519
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C K+ E +L+KG +LD SL+ C +++ID A+AL +I D
Sbjct: 520 LCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTD 579
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
V +++L+ GL G+++EA ++ MKE
Sbjct: 580 VVMHNILIHGLCSAGKVDEASQLLSEMKE 608
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 198/479 (41%), Gaps = 51/479 (10%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVY-GFVPAVSACNALLDALYRQNEIR-- 64
R S+S AL +VL +S + L +R + + G P V + NALLDA R
Sbjct: 81 RFSESAAL-VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDA 139
Query: 65 ---LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYN 116
AS +GA R ++PN T++++ + LC G + + L DS G+ + Y+
Sbjct: 140 DAFFASLSHGAFGRR-IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYS 198
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
++ + K A L+EM + + P Y+++L G R + E + R+ +V
Sbjct: 199 TLMSGFVKNNRLDNALYLLDEMPS-YEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVR 257
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+ + N ++ L +G A +++R + T G M+ L + V
Sbjct: 258 DPGASPNLATYN-VMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDV 316
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE---------VCG---------LL 278
A ++Y + + G+ Y + + C + E V G +L
Sbjct: 317 DSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIML 376
Query: 279 RDVVERGYI-----------------PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ + + G + P + S + C KG + ++L G
Sbjct: 377 KGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGK 436
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD F SS++ C + ++D A+ L+ KI + Y+ L++G + + +A+R
Sbjct: 437 ELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIR 496
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ M E ++ ++ ++ LC ++ +A + EML+ G D TY +I G
Sbjct: 497 VYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGL 555
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/423 (17%), Positives = 166/423 (39%), Gaps = 48/423 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++LD G+F + +V+ M P + ++ L R ++ A+ +Y M++
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVMYNLVIDFYSKKGDFGAA 131
G+ P+ ++ + + C +G+ DS GI + YN+++ G A
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKA 388
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDG--------------------ARRYEKTEVSDRIV 171
D + +L+P T+S+++ G + ++ S I
Sbjct: 389 TDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMIS 448
Query: 172 GLMVEKKL---------LPKHFLSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIEL 218
GL + +L + N ++ I K A ++ + +
Sbjct: 449 GLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSP 508
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ L K + EA + + E+G + + Y + + LC++ + + L
Sbjct: 509 TTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALW 568
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC------SSLM 332
++++G + + + C GK E +LLS + +K + CC ++LM
Sbjct: 569 NQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEK-----NNCCPNVVTYNTLM 623
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ + DKA +L + I + D+ +Y+ + GL R E V++ + M ++
Sbjct: 624 DGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGII 683
Query: 393 SSS 395
++
Sbjct: 684 PTA 686
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 17/294 (5%)
Query: 159 RRYEKTEVS--DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR-----A 211
RR + S R++G++ + P+ S V+ S AA F+R
Sbjct: 56 RRLATSSPSRLPRLLGILPRLRHRPRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLG 115
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE----RGITVRDSDYYAFVNVLCK 267
C+ + + +L A + R +A + +S R I Y + LC
Sbjct: 116 CNPGVRSHN----ALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCV 171
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ L + RG P + S ++ + LL + + D+ C
Sbjct: 172 RGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVC 231
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L+ N + +KA+ + ++ + G S ++ATY+V+LDGL K G +EA +++ M
Sbjct: 232 YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERM 291
Query: 387 -KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ LC ++ A + + EM+K G PD Y ++ GF
Sbjct: 292 VANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGF 345
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 161/371 (43%), Gaps = 43/371 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + +LS++++C+ H GL V + G P++ LL+ L + ++
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDF 121
LY M+ G+ PN +T++++ L +SGK LG L + + V Y+ +ID
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y +G A + M + + TP TY+S+++G + E+ E + +++ + K L+P
Sbjct: 212 YCLRGQMDEARSVFDLMVS-KGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVP 270
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I L G+ AA+ +F+ C T G +L L K G ++EA
Sbjct: 271 D--IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFA 328
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + + Y ++ LCK C
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSLCK-------C-------------------------- 355
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK K+ +EL S ++D+GL + + ++L+ C I +A L K+E+ + D
Sbjct: 356 --GKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKC 413
Query: 362 TYDVLLDGLFK 372
Y+V++ G +
Sbjct: 414 AYNVIIQGFLQ 424
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 135/300 (45%), Gaps = 7/300 (2%)
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
L P T++++L+G K + + M+ + L P + + +I LS GK
Sbjct: 128 LEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTY--NVIINSLSKSGKANE 185
Query: 204 AEMIFKRACDEKIELQDDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A K+ EK+ + ++ G++ EA ++ L+ +G T Y +
Sbjct: 186 ALGFLKQM--EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N CK + EE LL + + +G +P + + ++ C G+ ++L + G
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ L++ C + +++A AL ++++ ++ Y +L+D L K G++++
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+F + + + + ++ +V LC + +A K +M + G PD+ Y +I GF+
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFL 423
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ ++ + G + + + I GI +N C H+ + +L +++ G
Sbjct: 68 LFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLG 127
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C +GK +V L +L +GL + + + ++ + + ++A+
Sbjct: 128 LEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEAL 187
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
++EK+ +V Y L+DG G+M+EA +FD M + ++ +++
Sbjct: 188 GFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGY 247
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ + +A++ DE L+ G PD T+ +ISG
Sbjct: 248 CKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
R ++ R +PC +E S+ +S G ++ V L + G+ D S L+ +C
Sbjct: 50 FRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCH 109
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
++D +++ KI KL + T+ LL+GL +G+M++ + ++D M + + +
Sbjct: 110 LHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYT 169
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++++ L + +A+ +M K+G P+ Y +I G+
Sbjct: 170 YNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGY 212
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 196/477 (41%), Gaps = 89/477 (18%)
Query: 44 VPAVSACNALLDALY---RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ---------- 90
+P++S+CN LL++L R ++R A +G +V G P+ F W+ Q
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAA---FGLLVAAGARPDTFAWNKAVQACVAAGDLDE 176
Query: 91 ---ILCRSGKFE------------VVLGLLDSGIYS-----------------SVMYNLV 118
+L R G+ E V+ GL SG S + YN +
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236
Query: 119 IDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
ID + K GD A F ++M +GR P TY+ +L G R + + + ++ M
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRK--PNVVTYNVLLSGLCRAGRMDETRALMDEMTSY 294
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+LP F + L+ G + +F + + + + TC +L L K+G+V
Sbjct: 295 SMLPDGFTYS--ILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVA 352
Query: 238 EAIQIYHLISERGIT---------------VRDSD--------------------YYAFV 262
+A Q+ ++ G+ VRD Y A +
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N LCK E L+ ++ + G P + + + G+ ++ +LS + DKG+
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK 472
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ S+++ +C N +I +A+A+ + + Y+ ++D + G E+A +
Sbjct: 473 SNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ MK V +S ++ +++ LC ++ +A + + G +PD +Y +IS
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISA 589
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 183/416 (43%), Gaps = 9/416 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L+V+ M G P N ++D + ++ L M++DG PN T++++
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272
Query: 90 QILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR+G+ + L+D S + Y+++ D ++ GD E + +
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLK-KGV 331
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
G T S +L+G + K +++++ ++V L+P + + +I + A
Sbjct: 332 IIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIY--NTLINGYCQVRDLQGA 389
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
IF++ I T ++ L K + EA + + + G+ + ++
Sbjct: 390 FSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+ Q E+ +L D+ ++G + V + C GK E +L ++ K ++ +
Sbjct: 450 YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPN 509
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR-IF 383
+ +S+++ Y + ++A L K++ S + TY++LL GL K+ +++EA I+
Sbjct: 510 AQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIY 569
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + S+ ++S C+ + +A++ EM K +P TY ++S
Sbjct: 570 NLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 159/365 (43%), Gaps = 8/365 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M Y +P + L D L R + R L+G ++ GV +T S++ LC+ GK
Sbjct: 291 MTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGK 350
Query: 98 F----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+V+ L+ +G + ++ +YN +I+ Y + D AF +M R++ P TY+
Sbjct: 351 VAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM-KSRHIRPDHITYN 409
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + E ++ +V M + + P + + +I G+ +
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEKSGVDPS--VETFNTLIDAYGRAGQLEKCFTVLSDMQ 467
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D+ I+ + G ++KA K G++ EA+ I + + + Y + ++ + E
Sbjct: 468 DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTE 527
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ L+ + G + + C + E EEL+ + ++GL D ++++
Sbjct: 528 QAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C+ D+A+ L ++ K + TY LL L GR+ + ++ +M V
Sbjct: 588 SACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVE 647
Query: 393 SSSSF 397
SSS
Sbjct: 648 PSSSI 652
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 153/379 (40%), Gaps = 8/379 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G G + M G P V N LL L R + L M
Sbjct: 236 MIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMY-----NLVIDFYSKKGDFGAAF 132
+ P+ FT+S++ L R+G +L L + V+ +++++ K G A
Sbjct: 296 MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA- 354
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+++ EM L P + Y+++++G + + + I M + + P H + +I
Sbjct: 355 EQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITY--NALI 412
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L M AE + ++ +T ++ A + G++++ + + ++GI
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK 472
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ + V CK + E +L D++ + +P A + + + G ++ L
Sbjct: 473 SNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ + G+ F + L++ C N QID+A L + DV +Y+ ++
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCN 592
Query: 373 DGRMEEAVRIFDYMKELKV 391
G + A+ + M + +
Sbjct: 593 KGDTDRALELLQEMHKYDI 611
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
R +P + + S G+ +V ++ G D+F + ++ + +D+
Sbjct: 117 RSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDE 176
Query: 344 AIALHIKIEKLKGS--LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
A+A+ ++ + +G+ D +Y+V++ GL++ G+ +A+++FD M + V + ++ +
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +L + D+ML+ G KP+ TY ++SG
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGL 275
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----E 99
VP N+++DA A L M GVS + FT++L+ + LC++ + E
Sbjct: 507 VPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEE 566
Query: 100 VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
++ L + G+ V+ YN +I KGD A + L EM + ++ P TY +L
Sbjct: 567 LIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM-HKYDIRPTLRTYHPLLSAL 625
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+ + + MV K + P + G
Sbjct: 626 GSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 196/444 (44%), Gaps = 11/444 (2%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M++S G + + +L +G ++ +++ ++ G P + N L+D ++
Sbjct: 308 MVRS--GVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKA 365
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIY-SSVMY 115
E+ AS LY M GVSP+ T++++ + G+ E ++ L+ SG++ S +Y
Sbjct: 366 REVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLY 425
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
++++ G A L E+ + LT ++S++ R + + +MV
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLE-KGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
P S + ++ L G A ++ R ++ + +L K
Sbjct: 485 RCGFTPSS--STCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNN 542
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++ A ++ + ERGI + A ++ L K EE + ++ G++P +
Sbjct: 543 LEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNS 602
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C G+ E +L + KGLL D+F + +++ +C Q+ AI + ++++
Sbjct: 603 LIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG 662
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
D+ T+++L+ G K M A I + M + +++ + C ++++ +A+
Sbjct: 663 LLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAV 722
Query: 415 KNHDEMLKMGHKPDEATYKQVISG 438
D+++ G PD TY ++SG
Sbjct: 723 IILDQLISAGIVPDTVTYNTMLSG 746
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 174/401 (43%), Gaps = 44/401 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EV 100
P V N L++A +A MVR GV P+ T++ + LCR G ++
Sbjct: 280 PDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKL 339
Query: 101 VLGLLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
G+ D GI ++ +YN ++D Y K + A L E ++P T++ ++ G
Sbjct: 340 FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQA-SLLYEEMRTTGVSPDCVTFNILVWGHY 398
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+Y + E SDR++ ++ L FL + Y +
Sbjct: 399 KYGRIEDSDRLLKDLIVSGL----FLDSSLYDV--------------------------- 427
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
M+ +L GR+ EA+++ + E+G+T+ + + + + ++ R
Sbjct: 428 ------MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYR 481
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+V G+ P + + + C KG +E LL +L+KG ++ + L++ Y
Sbjct: 482 IMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMN 541
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++ A L ++++ D + L+DGL K G +EEA +F M + V ++ ++
Sbjct: 542 NLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYN 601
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC + +A+K EM + G D T+ +I GF
Sbjct: 602 SLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGF 642
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 148/367 (40%), Gaps = 34/367 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + ++ YS GL E YR+M GF P+ S CN+LL L R+ ++ A L M
Sbjct: 459 AFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRM 518
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+ G NK V Y +++D Y K + A
Sbjct: 519 LEKGFPINK------------------------------VAYTVLLDGYFKMNNLEGAQF 548
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
EM R + P +++++DG + E + + M +P +F + +I+
Sbjct: 549 LWKEM-KERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF--AYNSLIR 605
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
L D G+ A + K + + T ++ + G++K AI+ + + G+
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLP 665
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ + CK ++ + G P + ++ C K + +L
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ G++ D+ ++++ CS+ +D+A+ L K+ K+ +V T ++LL K
Sbjct: 726 DQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQ 784
Query: 374 GRMEEAV 380
G E+A+
Sbjct: 785 GMPEKAL 791
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 170/379 (44%), Gaps = 14/379 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+D Y G ++ M +G N+LLDA R+ + + + M
Sbjct: 71 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130
Query: 76 DGVSPNKFTWSLVAQILCRS---GKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGA 130
+G+ P T++++ L + K E V + S S Y+ VI+ Y + G+
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--- 187
A + +E C G + P TY ++++G + + E ++ +V M + + +
Sbjct: 191 ASEVFDE-CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 249
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ Y + + D K +MI ++ IEL T + L + R+ EA + ++
Sbjct: 250 DGYCRKNMVD--KALEIKMIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 304
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E+G+ Y +++ C E E L R++ G P + + + KG +
Sbjct: 305 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E E + + KGL+ D + ++L+ +C N ++D A+ L ++++ ++ Y L+
Sbjct: 365 EAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 424
Query: 368 DGLFKDGRMEEAVRIFDYM 386
GL K+GR EEA +++D M
Sbjct: 425 SGLAKEGRSEEAFQLYDNM 443
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 170/386 (44%), Gaps = 43/386 (11%)
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGA 130
D V+P + S+V C+SG+ LLD G+ +++ YN ++D Y+++ D
Sbjct: 63 DSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDR 120
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ L M N + P TY+ ++DG AR K E V +++ K+ LSG
Sbjct: 121 VAEMLKVMEN-EGIEPTVGTYTILVDGLSAARDITKVEA--------VFEEMKSKN-LSG 170
Query: 188 NDY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ Y VI G A +F IE + T G ++ K G+++ A +
Sbjct: 171 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLV 230
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPE---------EVCGLLRDVVERGYIPCAMELS 294
+ RG+ + + ++ C+++ + E G+ DV + C + +
Sbjct: 231 TDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRA 290
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ E + LL +++KG+ + ++L+ +C+ + +A L ++
Sbjct: 291 N---------RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN 341
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
+ TY+V++DG K G + EA R + M++ +V S+ +V C ++ A
Sbjct: 342 GAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVA 401
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
++ +EM + G KP+ Y +ISG
Sbjct: 402 LRLFEEMKQRGSKPNLVAYTALISGL 427
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD------------------- 257
E DD MLK + EG ++ + Y ++ + RD
Sbjct: 115 EKDDDRVAEMLKVMENEG-IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 173
Query: 258 -YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + +N C+ + + V G P + C G+ + E L++ +
Sbjct: 174 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 233
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+G+ ++ +++++ YC +DKA+ + + +EK+ LDV TY+ L GL + RM
Sbjct: 234 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 293
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+EA + M E V + S+ ++S C+ ++ +A + EM G +P TY +
Sbjct: 294 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 353
Query: 436 ISGFM 440
+ G++
Sbjct: 354 MDGYI 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 99/256 (38%), Gaps = 43/256 (16%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D Y K + LE+ +M G V N L L R N + A L M+
Sbjct: 245 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 304
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFG 129
GV PN +++ + I C G L + S V YN+++D Y KKG
Sbjct: 305 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A NEM + L P +Y++++ G K +V+ R+ M ++ P
Sbjct: 365 EAERFKNEM-EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV----- 418
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
Y A ++ L+KEGR +EA Q+Y +
Sbjct: 419 -----------AYTA---------------------LISGLAKEGRSEEAFQLYDNMLGD 446
Query: 250 GITVRDSDYYAFVNVL 265
G+T D+ Y A V L
Sbjct: 447 GLTPDDALYSALVGSL 462
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
P+ V L VV GY C G+ +LL + G+ +++ C +S
Sbjct: 62 PDSVTPLSASVVVDGY--------------CKSGRVAHARQLLDEMPRHGVKVNALCYNS 107
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L++ Y + D+ +A +K+ + +G V TY +L+DGL + + +F+ MK
Sbjct: 108 LLDAYTREKDDDR-VAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK 166
Query: 390 KVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F V++ C +R+A + DE + G +P+E TY +I+GF
Sbjct: 167 NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF 217
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 190/469 (40%), Gaps = 40/469 (8%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + L ++ + GL +EV+ + + G P NA++DAL + N + LA
Sbjct: 189 GLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLA 248
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDF 121
+ M P++FT++++ +CR G + L L+ G + +V Y ++ID
Sbjct: 249 YLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDG 308
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK--- 178
+ G AF L M RN+ P +T S++ G R + + ++ VE+K
Sbjct: 309 FFNAKRAGEAFKVLQTM-KERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGI 367
Query: 179 --LLPKHFL------------------SGNDYVIQKLSDMGKTYAAEM----------IF 208
L+ + L +G + + S T A + +F
Sbjct: 368 TQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVF 427
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
++ T +++AL K G+++ + + G+ Y ++ LCK
Sbjct: 428 DNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKG 487
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ + RD+ RG P + + + C G + +ELL +L+ D F
Sbjct: 488 KSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTF 547
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+SL++ C + + A ++ + +V TY++L+ G + + + MK
Sbjct: 548 NSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL 607
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + SF ++ +KA K D ML++G +PD TY +I
Sbjct: 608 HGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALI 656
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 157/406 (38%), Gaps = 49/406 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + L + + M G+ P V L+D + A + M V PN+ T
Sbjct: 278 GVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATM 337
Query: 86 -SLV--------------------------AQILC---------RSGKFEVVLGLLDSG- 108
SLV Q++C S E V+ L+ +G
Sbjct: 338 RSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGK 397
Query: 109 ---IYSSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
+ SS +N+ + KK D FD C + PGFSTY ++++ +
Sbjct: 398 EGYVPSSSTFNITLACVLKKLDLKVTCTVFDN----CVQSGVKPGFSTYLTLIEALYKAG 453
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
K E+ +R + ++ L+ + + VI L A +F+ + I T
Sbjct: 454 KMEIGNRYMDRLINDGLISNIY--SYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVT 511
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ + G + +A ++ ++ E + + ++ LC+ H+ E G ++V
Sbjct: 512 YNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMV 571
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E P + + + S C G LL + G+ D+F ++L++ Y +
Sbjct: 572 EWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQ 631
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
KA L + +L D TY L+ L K GR ++A IF MKE
Sbjct: 632 KAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKE 677
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 130/296 (43%), Gaps = 14/296 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV- 100
G+VP+ S N L + ++ ++++ ++ V+ GV P T+ + + L ++GK E+
Sbjct: 399 GYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIG 458
Query: 101 ---VLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSS 153
+ L++ G+ S++ YN+VID K G + DR +EM + R ++P TY++
Sbjct: 459 NRYMDRLINDGLISNIYSYNMVIDCLCK----GKSMDRASEMFRDLHNRGISPNIVTYNT 514
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++ G R + + ++ +++E + P F + +I L K A F +
Sbjct: 515 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS--LIDGLCQAHKHENAFGCFTEMVE 572
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ T ++ + G V + + + GI + A + +++ ++
Sbjct: 573 WDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQK 632
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
L ++ G P + S C G+ + E+ ++ + G DS+ CS
Sbjct: 633 AEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCS 688
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 126/296 (42%), Gaps = 8/296 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S ++ L C K V+ G P S L++ALY+ ++ +
Sbjct: 398 EGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEI 457
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVID 120
+ ++ DG+ N +++++V LC+ E+ L + GI + V YN +I
Sbjct: 458 GNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIG 517
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + G+ A + L + R P T++S++DG + K E + MVE +
Sbjct: 518 GFCRNGNMDKAQELLEMLLESR-FRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDV- 575
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + ++ N +I +G + + ++ I+ + +++ + + R ++A
Sbjct: 576 PPNVITYN-ILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 634
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+++ + GI + Y A + LCK + ++ + + E G P + S F
Sbjct: 635 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLF 690
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 196/451 (43%), Gaps = 37/451 (8%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L ++ + + + LE+ MR G P SA + L L R +
Sbjct: 215 ESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWK 274
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL--------DSGIYSSVMYNLVID 120
L+G +VR G PN FT++L+ CR G + LL + +YS YN+VI+
Sbjct: 275 LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYS---YNIVIN 331
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDG---------ARRYEKTEVSDRI 170
KG A LN M NG P +T+ +I+D AR+Y E+ D
Sbjct: 332 ANCLKGQSSYALHLLNLMIENG--CKPSIATFCTIIDAFCKEGNVELARKYFD-EIED-- 386
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+GL + ++ +SG YV K D+ + A ++F+ + I T ++
Sbjct: 387 MGL-SQNTIVYNIMISG--YV--KARDISQ---ANLLFEEMRTKDIVPDGITFNTLVAGH 438
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+ G+ ++ ++ +S G+ S V LC + +E LL +++ +G P
Sbjct: 439 YRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSV 498
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA-IALHI 349
+ + +A+ G + ++ GL S CSSL+ +D+A IAL+
Sbjct: 499 VAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD 558
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
I+K ++A + VLLDG F+ G + A +++ MK V + +F ++ LC
Sbjct: 559 MIDKGFPVTNMA-FTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISG 617
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A +ML+ G P+ Y +I GF
Sbjct: 618 LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGF 648
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 190/466 (40%), Gaps = 77/466 (16%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L++ + KG G + +M + P V + N +++A + + A L M
Sbjct: 290 TFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLM 349
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDF 128
+ +G P+ T+ + C+ G E+ D G+ ++++YN++I Y K D
Sbjct: 350 IENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDI 409
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV------GLMVEKKL--- 179
A + L E +++ P T+++++ G RY K E +R++ GL+ + L
Sbjct: 410 SQA-NLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDV 468
Query: 180 -------------------------LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+P ++ N +I + G A +
Sbjct: 469 TVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNS-IIAAYGNAGLEERAFYAYGIMVKF 527
Query: 215 KIELQDDTCGCMLKALSKEGRVKEA-IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ TC +L +L ++G + EA I +Y +I ++G V + + ++ +
Sbjct: 528 GLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI-DKGFPVTNMAFTVLLDGYFRIGAVNM 586
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ RG P A+ + F+ C G + ++ S +L KG + ++F +SL+
Sbjct: 587 AESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIG 646
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+C ++++A+ L ++ K D+ T ++++ GL K GRM+ A+ F
Sbjct: 647 GFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM--------- 697
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+M +MG PD TY +I G+
Sbjct: 698 -------------------------DMCRMGLSPDIVTYNTLIDGY 718
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 9/344 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G P+V A N+++ A A YG MV+ G++P+ T S + L R G +
Sbjct: 493 GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEA 552
Query: 100 --VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ ++D G +++ + +++D Y + G A NEM GR + P +++ ++
Sbjct: 553 WIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM-KGRGVFPDAVAFAAFIN 611
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + M+ K +P +F+ + +I +GK A + + +
Sbjct: 612 GLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS--LIGGFCKVGKLNEALKLVREMNKRGL 669
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K+GR+K AI+ + + G++ Y ++ CK
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADD 729
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L+ + + G+ P + + C K +L ++ G++ ++ ++++ C
Sbjct: 730 LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC 789
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
N +D A+ L K+ K+ + T +VLL K G E+A+
Sbjct: 790 -NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 832
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 6 EGRDSQSDALSLV--LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+GR DA++ ++ GL D +V+ M GFVP N+L+ + ++
Sbjct: 595 KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKL 654
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLV 118
A L M + G+ P+ FT +++ LC+ G+ E + + G+ V YN +
Sbjct: 655 NEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 714
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID Y K D G A D + +M + P +TY+ + G K + I+ ++
Sbjct: 715 IDGYCKAFDVGGADDLMMKMSDS-GWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG 773
Query: 179 LLPK 182
++P
Sbjct: 774 IVPN 777
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 36/216 (16%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++A K EA++I + E G+T S +L + V L DVV +G
Sbjct: 224 LMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 283
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C KG W + E L V+ K F C
Sbjct: 284 PCPNNFTFNLLILEFCRKG-WTRIGEALLHVMGK------FRCEP--------------- 321
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
DV +Y+++++ G+ A+ + + M E S ++F ++
Sbjct: 322 -------------DVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAF 368
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C + A K DE+ MG + Y +ISG++
Sbjct: 369 CKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYV 404
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 167/408 (40%), Gaps = 50/408 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P+ L+ AL + I A L+ M+ G PN T++++ LCR GK E
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 102 LG----LLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
G ++ I+ SV+ YN +I+ Y K G AF+ L M R P T++ +++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM-EKRACKPNVRTFNELME 414
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G L +GK Y A + KR D +
Sbjct: 415 G-------------------------------------LCRVGKPYKAVHLLKRMLDNGL 437
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD---YYAFVNVLCKEHQPEE 273
+ ++ L +EG + A Y L+S + D + A +N CK+ + +
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTA---YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ +G + + + C GK ++ +L ++ +L + +++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
++ + +A+ KI KL V TY L+DGL + G + + RI + MK +
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + I+++ LC + +A K M G P+ TY ++ G++
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 167/389 (42%), Gaps = 31/389 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +G ++ M + P A+++A +Q + +AS G M+R
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G+S ++ T + + +C+ GK L +L++ + ++ N+++D SK
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
L ++ N L P TY++++DG R S RI+ LM LP +
Sbjct: 565 ELAMLGKI-NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY--PYTI 621
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L G+ AE + D + T M+K G++ A++ + ERG
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 251 ITVRDSDYYAFV-------------------NVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ D Y + + ++ +E PE + L+ V + G C
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG--GCIS 739
Query: 292 ELSRFVASQ-CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
L F+ ++ C +G+ E +L+ VL++G+ L+ +ME YCS ++ K + L
Sbjct: 740 GLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITL 798
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ K ++ +++ GL K+G E A
Sbjct: 799 VLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 202/483 (41%), Gaps = 63/483 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D G + V R M P+V NAL++ + + A L M +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
PN T++ + + LCR GK ++ +LD+G+ ++ YN++ID ++G
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A+ L+ M N ++ P T+++I++ + K +V+ +GLM+ K + ++G
Sbjct: 460 AYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE-VTGTT- 516
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I + +GKT A I + +I + +L LSK +VKE + + I++ G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 251 IT-------------VRDSD----------------------YYAFVNVLCKEHQPEEVC 275
+ +R D Y +N LC+ + EE
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME-Y 334
LL + + G P + + V GK E + A++++G L+ SSL++ +
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 335 YCSNRQIDKA-------IALHIK-----------IEKLKGSLDVATYDVLLDGLFKDGRM 376
S + ID + IAL +E+L G + L+ L K+GR
Sbjct: 697 VLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCIS-GLCIFLVTRLCKEGRT 755
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+E+ + + E V + I++ C K+ K M+ +LK G P ++ VI
Sbjct: 756 DESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVI 815
Query: 437 SGF 439
G
Sbjct: 816 QGL 818
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 164/380 (43%), Gaps = 43/380 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++ +GL ++ M G P V L+D L R +I
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF-----------------------EVVL 102
A+ + MV+D + P+ T++ + C+ G+ E++
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 103 GL----------------LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
GL LD+G+ ++ YN++ID ++G A+ L+ M N ++
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIE 473
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P T+++I++ + K +V+ +GLM+ K + ++G +I + +GKT A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE-VTGTT-LIDGVCKVGKTRDAL 531
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I + +I + +L LSK +VKE + + I++ G+ Y V+ L
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ +L + G +P + + C G+ +E E+LLSA+ D G+ +
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 326 FCCSSLMEYYCSNRQIDKAI 345
+ +++ Y +N ++D+A+
Sbjct: 652 VTYTVMVKGYVNNGKLDRAL 671
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 156/410 (38%), Gaps = 53/410 (12%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
V+GF ++LL +L + + LA Y M DG + + LC++G E
Sbjct: 153 VFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTE 212
Query: 100 VV---------LG-LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+G +LDS I +S++ + + + A + M P
Sbjct: 213 AAEMFMSKILKIGFVLDSHIGTSLLLG-----FCRGLNLRDALKVFDVMSKEVTCAPNSV 267
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
+YS ++ G + E + + M EK P +TY
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST----------------RTYTV----- 306
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++KAL G + +A ++ + RG Y ++ LC++
Sbjct: 307 ----------------LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ EE G+ R +V+ P + + + C G+ ELL+ + + + +
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
LME C + KA+ L ++ S D+ +Y+VL+DGL ++G M A ++ M
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +F +++ C + A ML+ G DE T +I G
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 2/251 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L G T AAEM + L +L + +++A++++ ++S+
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEV 260
Query: 251 ITVRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+S Y ++ LC+ + EE GL + E+G P + + + C +G +
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L ++ +G + + L++ C + +I++A + K+ K + V TY+ L++G
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
KDGR+ A + M++ + +F ++ LC + + KA+ ML G PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 429 EATYKQVISGF 439
+Y +I G
Sbjct: 441 IVSYNVLIDGL 451
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L + GR++EA + + E+G Y + LC ++ L +++ RG
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C GK +E + ++ + ++L+ YC + ++ A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
L +EK +V T++ L++GL + G+ +AV + M + + S+ +++ L
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + A K M +PD T+ +I+ F
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 129/320 (40%), Gaps = 40/320 (12%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ +L+++LD S + L + + G VP+V L+D L R +I + +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS-VMYNLVIDFYSK 124
M G PN + ++++ LC+ G+ E LL DSG+ + V Y +++ Y
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A + + M R Y E++DRI +++ +L +
Sbjct: 664 NGKLDRALETVRAMVE------------------RGY---ELNDRIYSSLLQGFVLSQKG 702
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC-------MLKALSKEGRVK 237
+ ++ +SD+ A +E I + + GC ++ L KEGR
Sbjct: 703 IDNSEE--STVSDI----ALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTD 756
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
E+ + + ERG+ + + + C + + + L+ V++ G++P +
Sbjct: 757 ESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVI 815
Query: 298 ASQCGKGKWKEVEELLSAVL 317
+G + EL+ +L
Sbjct: 816 QGLKKEGDAERARELVMELL 835
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 168/419 (40%), Gaps = 40/419 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
E + S S ++ Y+ G+ D + V+ +R G P + AC LL++L +Q
Sbjct: 127 EDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDT 186
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVID 120
++ MV+ GV N ++++ +SG E LL + G++ + YN +I
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 121 FYSKK-------------------------GDFGAAFDRLNEMCNGRNL--------TPG 147
Y KK F F R M L T
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN 306
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY++++DG R + + R+ +M + P + + +++KL + G+ A +
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG--VVTYNSILRKLCEDGRIREANRL 364
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+KIE + TC ++ A K + A+++ + E G+ + Y A ++ CK
Sbjct: 365 LTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ E L ++E+G+ P S V + K E+ +LL +GL D
Sbjct: 425 VLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVAL 484
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
L+ C Q+D A L +EK D + + ++ G++ EA +FD M
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 164/358 (45%), Gaps = 26/358 (7%)
Query: 86 SLVAQILCRS---GKFEVVLGL-LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+L+AQ +C + G ++ +L +DSG+ S + VI S +G G
Sbjct: 11 ALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYG-----------G 59
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+L+ F ++ L ++ + S +++ ++ + K HF + + ++ KL+ +
Sbjct: 60 PSLSWSFFIWTDSLPSSK--HSLQSSWKMILILTKHK----HFKTAHQ-LLDKLAQR-EL 111
Query: 202 YAAEMIFKR---ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
++ ++ + E E ++ +K G + ++I ++ I G+
Sbjct: 112 LSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQAC 171
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+N L K+ + V + + +V+ G + + V + G ++ E+LLS + +
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
KG+ D F ++L+ YC +A+++ ++E+ + ++ TY+ + G ++GRM E
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE 291
Query: 379 AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A R+F +K+ + ++ ++ C + ++ +A++ + M G P TY ++
Sbjct: 292 ATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 9/254 (3%)
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
N V Q+L+D IFK+ + ++ A SK G ++A ++ +
Sbjct: 176 NSLVKQRLTD-----TVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEME 230
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKW 306
E+G+ Y ++V CK+ E + +D +ER G P + + F+ +G+
Sbjct: 231 EKGVFPDIFTYNTLISVYCKKSMHFEALSV-QDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+E L + D + + ++L++ YC ID+A+ L +E S V TY+ +
Sbjct: 290 REATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI 348
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L L +DGR+ EA R+ M K+ + + +++ C ++++ A+K +M++ G
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Query: 426 KPDEATYKQVISGF 439
K D +YK +I GF
Sbjct: 409 KLDMYSYKALIHGF 422
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 130/346 (37%), Gaps = 40/346 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + N L+ +++ A + M R GV+PN T++ R G+
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 102 LGLL----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L D + V Y +ID Y + D A RL E+ R +PG TY+SIL
Sbjct: 293 TRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEAL-RLREVMESRGFSPGVVTYNSILRK 351
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDY-----------VIQKLSDMG---K 200
+ ++R++ M KK+ P + N Y V +K+ + G
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Query: 201 TYAAEMIFKRACDEKIELQDD-----------------TCGCMLKALSKEGRVKEAIQIY 243
Y+ + + C + +EL++ T ++ + + E ++
Sbjct: 412 MYSYKALIHGFC-KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+RG+ + Y + +CK Q + L + ++G + ++ + +
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRT 530
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
GK E L + ++ L+++ S+ Y + + + H+
Sbjct: 531 GKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHV 576
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 192/468 (41%), Gaps = 71/468 (15%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+ + A ++V++ +G D L + +M G P V N +++A ++ + A
Sbjct: 88 EPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARK 147
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDF 128
L+ + G SPN ++MYN +++ Y K +
Sbjct: 148 LFDGLKEMGFSPN------------------------------AIMYNTLMNGYVKMREI 177
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR------IVGL--------- 173
A + L E + + P T++ ++ G +Y + E DR ++GL
Sbjct: 178 DQA-NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDI 236
Query: 174 --------------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
M+EK L P + + VI S G A +K
Sbjct: 237 SVSGLCWAGRLDEAMEFLMDMLEKGLSPS--IIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ TC +L LS GR++EA ++ + E+G++V + + ++ K
Sbjct: 295 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 354
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ RG P + S F+ +G +E + +L KGL+ ++F +SL+
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 414
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+C ++++A+ L K+ + +G L D+ T ++++ GL K GRM A+ +F M + +
Sbjct: 415 GFCKCGKLNEALKLE-KVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS 473
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ C ++ A + M G PD TY I GF
Sbjct: 474 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 521
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 194/483 (40%), Gaps = 97/483 (20%)
Query: 1 MIQSCEGRDSQSDALSL------------------VLDCYSHKGLFMDGLEVYRMMRVYG 42
+I +C R SDAL+ V++ + +G ++ +++ ++ G
Sbjct: 97 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 156
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI----------- 91
F P N L++ + EI A+ LY M + G++P+ T++++
Sbjct: 157 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 216
Query: 92 ------------------------LCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFY 122
LC +G+ E ++ +L+ G+ S++ +N VI Y
Sbjct: 217 RLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 276
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
S+ G AF+ M + LTP ST SS+L G + + + ++G M+EK L
Sbjct: 277 SQAGLEDKAFEAYKLMVH-FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGL--- 332
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+++M T + FKR G V A +
Sbjct: 333 -----------SVNNMAFTVLLDKFFKR-----------------------GDVVGAQSL 358
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + RGI + AF++ L K+ EE + +++ +G IP + + C
Sbjct: 359 WGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCK 418
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
GK E +L + +GLL D F + ++ C ++ AI + + + + S D+ T
Sbjct: 419 CGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIIT 478
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L++G K M A + + M +++ I + C + + +A+ DE++
Sbjct: 479 YNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 538
Query: 422 KMG 424
G
Sbjct: 539 SAG 541
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 33/322 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+ YS GL E Y++M +G P+ S C++LL L ++ A+ L G M
Sbjct: 268 AFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 327
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+ G+S N ++ + +++D + K+GD A
Sbjct: 328 IEKGLSVN------------------------------NMAFTVLLDKFFKRGDVVGAQS 357
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
EM R + P +S+ +DG + E + + M+ K L+P +F + +I
Sbjct: 358 LWGEM-ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF--AYNSLIC 414
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
GK A + K + T ++ L K+GR++ AI ++ + + G++
Sbjct: 415 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 474
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N CK L+ + G P + + C + +L
Sbjct: 475 DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 534
Query: 314 SAVLDKGLLLDSFCCSSLMEYY 335
++ G+L SF C + +
Sbjct: 535 DELVSAGILSFSFACPPTLNAH 556
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
I+G M E + P SG + + L +G +FK + T ++
Sbjct: 8 ILGRMREVGVRPSA--SGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILG 65
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
++G + + HL+ + Y +N C + + ++ERG P
Sbjct: 66 FCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPT 125
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + + C +G E +L + + G ++ ++LM Y R+ID+A L+
Sbjct: 126 VVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYE 185
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLK 408
++ K + D T+++L+ G +K GR E+ R+ + L ++ S F I VS LC
Sbjct: 186 EMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAG 245
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +AM+ +ML+ G P + VI+ +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 276
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A++I + E G+ S +L + V L +DV+ RG PC S +
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA-LHIKIEKLKG 356
C KG E LL + ++F + ++ C + A+A ++ IE+
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER-GC 122
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
+ V T++ +++ K+G + EA ++FD +KE+ ++ + +++ ++E+ +A
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182
Query: 416 NHDEMLKMGHKPDEATYKQVISG 438
++EM K G PD T+ ++SG
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSG 205
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 147/378 (38%), Gaps = 51/378 (13%)
Query: 102 LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+G+ S ++++ L++ + GD+G + ++ R P T+S I+ G R
Sbjct: 15 VGVRPSASGVAILFKLLL----RVGDYGNVWKLFKDVIR-RGPQPCKYTFSGIILGFCRK 69
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIE 217
+ + ++ LM + P F + VI G+T A ++ +R C+ +
Sbjct: 70 GCIHLGESLLHLMPKFHCEPNAF--AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVV 127
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ A KEG V EA +++ + E G + Y +N K + ++ L
Sbjct: 128 ----TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 278 LRDVVERGYIPCAMELSRFVASQ-----------------------------------CG 302
++ ++G P + + V+ C
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ E E L +L+KGL +S++ Y DKA + + + +T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
LL GL +GR++EA + M E + V++ +F +++ + ++ A EM
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 363
Query: 422 KMGHKPDEATYKQVISGF 439
+ G PD + I G
Sbjct: 364 RRGIFPDVVAFSAFIDGL 381
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 171/424 (40%), Gaps = 44/424 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G+ V+ +M + G + ALL L +R A ++ M D +P+
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
++ + LC +G+ ++ + +G + V+YN +ID Y G+ A ++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHAL-KVF 235
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E +G +P TY+ ++ G L
Sbjct: 236 EGMDGNRCSPNVRTYTELIHG-------------------------------------LC 258
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
GK A ++F R + +E T +++ EG ++ A ++ HL+ G+ D
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ ++ LCK + EE L +V++G + + + C GK +EL+ +
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ +G + D+ SSL++ C +++ +A + + + TY +++D L ++
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
E +IFD M + ++ + V C + A +M+ G P+ TY +
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498
Query: 436 ISGF 439
I G+
Sbjct: 499 IRGY 502
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 182/413 (44%), Gaps = 27/413 (6%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF P + NAL+D E+ A ++ M + SPN T++ + LC+SGK E
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 102 LGL----LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L +++G+ +V+ Y +I +G AF RL + L P T+S ++D
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF-RLLHLMETNGLVPNDWTFSVLID 325
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ EK E + +G +V+K + + + +I L GK AA+ + ++ E
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS--LIDGLCKTGKIDAADELMQKMISEGF 383
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ ++ L ++ ++ +A + + E+GI Y ++ L +E E
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ ++ G P + + FV S C +G+ ++ E ++ ++D+G+ + ++L+ Y
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
+ + +A + + + +Y VLL + K + +V I+ + ++K + S+
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK-IADMKDLQESN 562
Query: 397 FVIVVSRL-----------CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +V ++ L MK H G++P T +I+G
Sbjct: 563 YDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH------GYQPSN-TINAMITG 608
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + + C G ++ L+++L GL DS+ +S + YC + A + + +
Sbjct: 76 TTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFV-LMP 134
Query: 354 LKGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELR 411
L+G L A TY LL GL G + EA+ +F M+ + + +V LC
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A +E + G +P+ Y +I G+
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGY 222
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 186/462 (40%), Gaps = 35/462 (7%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + L ++ + GL +EV+ + + G P NA++DAL + N + LA
Sbjct: 189 GLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLA 248
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDF 121
+ M P++FT++++ +CR G + L L+ G + +V Y ++ID
Sbjct: 249 YLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDG 308
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+ G F L M RN+ P +T S++ G R + + ++ VE+K
Sbjct: 309 FFNAKRAGETFKVLQTM-KERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGI 367
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ--------DDTCG--------- 224
+ N ++ LS+ A M + I L TC
Sbjct: 368 TQLVCDN--ILYCLSNNSMASEAVMFXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSG 425
Query: 225 ---------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+++AL K G+++ + + G+ Y ++ LCK +
Sbjct: 426 VKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRAS 485
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ RD+ RG P + + + C G + +ELL +L+ D F +SL++
Sbjct: 486 EMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGL 545
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + + A ++ + +V TY++L+ G + + + MK + +
Sbjct: 546 CQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDT 605
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
SF ++ +KA K D ML++G +PD TY +I
Sbjct: 606 FSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALI 647
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 155/397 (39%), Gaps = 40/397 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + L + + M G+ P V L+D + + M V PN+ T
Sbjct: 278 GVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATM 337
Query: 86 -SLVAQI---LCRSGKFEVVLGLL-----------DSGIY----------------SSVM 114
SLV + + FE++L + D+ +Y SS
Sbjct: 338 RSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSST 397
Query: 115 YNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+N+ + KK D FD C + PGFSTY ++++ + K E+ +R +
Sbjct: 398 FNITLACVLKKLDLKVTCTVFDN----CVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYM 453
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
++ L+ + + VI L A +F+ + I T ++
Sbjct: 454 DRLINDGLISNIY--SYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFC 511
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G + +A ++ ++ E + + ++ LC+ H+ E G ++VE P +
Sbjct: 512 RNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVI 571
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + S C G LL + G+ D+F ++L++ Y + KA L +
Sbjct: 572 TYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSM 631
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+L D TY L+ L K GR ++A IF MKE
Sbjct: 632 LRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKE 668
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 128/295 (43%), Gaps = 14/295 (4%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV-- 100
F P+ S N L + ++ ++++ ++ V+ GV P T+ + + L ++GK E+
Sbjct: 391 FXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGN 450
Query: 101 --VLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM---CNGRNLTPGFSTYSSI 154
+ L++ G+ S++ YN+VID K G + DR +EM + R ++P TY+++
Sbjct: 451 RYMDRLINDGLISNIYSYNMVIDCLCK----GKSMDRASEMFRDLHNRGISPNIVTYNTL 506
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ G R + + ++ +++E + P F + +I L K A F +
Sbjct: 507 IGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS--LIDGLCQAHKHENAFGCFTEMVEW 564
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T ++ + G V + + + GI + A + +++ ++
Sbjct: 565 DVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKA 624
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
L ++ G P + S C G+ + E+ ++ + G DS+ CS
Sbjct: 625 EKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCS 679
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
G P S L++ALY+ ++ + + ++ DG+ N +++++V LC+
Sbjct: 425 GVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRA 484
Query: 99 -EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E+ L + GI + V YN +I + + G+ A + L + R P T++S++D
Sbjct: 485 SEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR-FRPDIFTFNSLID 543
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K E + MVE + P + ++ N +I +G + + ++ I
Sbjct: 544 GLCQAHKHENAFGCFTEMVEWDV-PPNVITYN-ILICSFCAIGDVSRSTHLLRQMKLHGI 601
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ + +++ + + R ++A +++ + GI + Y A + LCK + ++
Sbjct: 602 QPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKARE 661
Query: 277 LLRDVVERGYIPCAMELSRF 296
+ + E G P + S F
Sbjct: 662 IFLSMKENGCTPDSYTCSLF 681
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+ R M+++G P + NAL+ +N + A L+ +M+R G+ P+ +T+ + + L
Sbjct: 591 HLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSL 650
Query: 93 CRSGKF----EVVLGLLDSG 108
C+SG+ E+ L + ++G
Sbjct: 651 CKSGRHDKAREIFLSMKENG 670
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 172/417 (41%), Gaps = 40/417 (9%)
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYN 116
+ R A+ + M R+G SP T+S LCR G E L + S G+ + YN
Sbjct: 270 DTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYN 329
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+I KKG+ A L EM ++P TYS ++ G + E ++ M
Sbjct: 330 AIIHGLCKKGELDEALKVLEEM-KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388
Query: 177 KKLLPK--------HFLSG---NDYVIQKLSDMGKT------YAAEMIFKRACDE----- 214
+ P H L +D + D+G A ++ K C +
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448
Query: 215 ---------KIELQDDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+ L D ++ K G A++ ++++ E GI + ++
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
C+E + EE L+ ++ +G P + + C + K + EL +L + +L
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
S+L++ + KA+ L+ ++ K+ + D+ Y +L++ L RM EA +F
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628
Query: 384 DYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + S+ V++ C + ++RKA +EML+ GH P TY ++ G+
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 171/386 (44%), Gaps = 43/386 (11%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L+++R + G+ +A + L+ Q ++ A L MVR+ ++P+ + +
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473
Query: 91 ILCRSG----KFEVVLGLLDSGIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ G E +L+ GI S+ N++ID + ++G A + +NEM + +
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM-QTQGIF 532
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+++++ + K+E + + LM+++ +LP +
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST----------------- 575
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ +K+ ++A+ +Y + + G+T Y +N+L
Sbjct: 576 --------------------LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C + E L + + E G P + + +A C G ++ L + +L +G L
Sbjct: 616 CHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTV 675
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+SL++ YC +ID A L ++++ + DV TY+VL+ + G +++A+ + +
Sbjct: 676 VTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNE 735
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELR 411
MKE V+ +++ L K+L+
Sbjct: 736 MKENGVLPDHMTYMMLEWLLKAKKLK 761
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 172/407 (42%), Gaps = 35/407 (8%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
NA++ L ++ E+ A + M G+SP+ +T+S++ C+ G E L L++ Y
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388
Query: 111 SSVMYNLV------------------IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
S++ +LV +D + G G +D+ + YS
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQ--------------TAYS 434
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++ G + + +++ MV L P S + ++ MG A F
Sbjct: 435 ILIKGFCMQGDLDSAHKLMEEMVRNNLAPDP--SNFESLVHGFCKMGLWVNALEFFNMML 492
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ I TC ++ A +EGRV+EA+ + + + +GI Y A +N LCKE + E
Sbjct: 493 EGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSE 552
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L +++R +P + S + + ++ L + +L G+ D + L+
Sbjct: 553 RALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILI 612
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
C ++ +A L K+ + + D +Y ++ G + G M +A +F+ M + +
Sbjct: 613 NILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHL 672
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++ +V C + + A DEM + G PD TY +I+
Sbjct: 673 PTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAA 719
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 49/289 (16%)
Query: 200 KTYAAEMIFKRACD-------EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
K +AA + + A D +EL +C +LK L++ R + ++ + G
Sbjct: 187 KVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPP 246
Query: 253 VRDSDYYAFVNVLCKEHQPE------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
Y +N CK + E + +L ++ G P + S ++ C G
Sbjct: 247 PNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYV 306
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ + + +++ L++ +C ++++ C ++D+A+ + +++ S DV TY +L
Sbjct: 307 ESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSIL 366
Query: 367 LDGLFKDGRMEEAVRIFDYMK----ELKVVSSSS-------------------------- 396
+ G K G +E+ + + + MK E +VS SS
Sbjct: 367 IHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGY 426
Query: 397 ------FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ I++ C +L A K +EM++ PD + ++ ++ GF
Sbjct: 427 KYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 200/447 (44%), Gaps = 69/447 (15%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ V ++ YG P V + NA++ + N+I A+ ++ M G SP+ T++++
Sbjct: 116 AMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIG 174
Query: 91 ILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC GK FEV+ LL G SV+ Y ++I+ +G A + +E+ + R L
Sbjct: 175 SLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVS-RGLR 233
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGL------------MVEKKLLPKHFLSGNDYVIQ 193
P TY++I+ G K + DR + +V +L + FL+ + +
Sbjct: 234 PDLYTYNAIIRGIC---KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW--- 287
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ G+ +M+ C+ + T ++ + +EGRV+EA+ + ++ E+G+T
Sbjct: 288 ---EDGERLMKDMVLS-GCEPNVV----THSILISSFCREGRVREAVNVLEVMKEKGLTP 339
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG--------- 304
Y ++ CKE + + L +V G +P + + +A+ C G
Sbjct: 340 DSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVF 399
Query: 305 -KWKEVE-------------------------ELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
K EV E++S ++ KG+ D +SL+ C +
Sbjct: 400 EKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRD 459
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSF 397
+D+AI L + +E + V +++++L G+ K R+ E + + M E + + +S+
Sbjct: 460 GLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSY 519
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMG 424
V+++ + + +AM+ + + ++G
Sbjct: 520 VLLIEGIAYAGWRAEAMELANSLYRLG 546
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 13/336 (3%)
Query: 106 DSGIYSSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
D +YS YN +I +SK +A FDR+ R +P TY+ ++
Sbjct: 128 DPDVYS---YNAMISGFSKANQIDSANQVFDRMR----SRGFSPDVVTYNIMIGSLCSRG 180
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
K E++ ++ +++ P + +I+ G+ A +F + T
Sbjct: 181 KLELAFEVMDELLKDGCKPS--VITYTILIEATILEGRINEALELFDELVSRGLRPDLYT 238
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
+++ + KEG A+ +S RG Y + + + E+ L++D+V
Sbjct: 239 YNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMV 298
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
G P + S ++S C +G+ +E +L + +KGL DS+ L+ +C ++D
Sbjct: 299 LSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLD 358
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
AI K+ D+ Y+ +L L K G + A+ +F+ + E+ + ++ +
Sbjct: 359 LAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMF 418
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
S L KA++ EM++ G PDE TY +IS
Sbjct: 419 SALWSCGNKIKALEMISEMIRKGIDPDEITYNSLIS 454
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 10/190 (5%)
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP----CAMELSRFVASQCGKGKWKEV 309
RD+ +N C+ + E L VV +G+ P C + F S+ K K V
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLK-KAMRV 119
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E+L D D + ++++ + QID A + ++ S DV TY++++
Sbjct: 120 MEILETYGDP----DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGS 175
Query: 370 LFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L G++E A + D +K+ S ++ I++ + +A++ DE++ G +PD
Sbjct: 176 LCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD 235
Query: 429 EATYKQVISG 438
TY +I G
Sbjct: 236 LYTYNAIIRG 245
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+++ + +G + + V +M+ G P + + L+ A ++ + LA MV
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
DG P+ ++ + LC+ G ++ L + + G +V YN + G+
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
A + ++EM + + P TY+S++ R + D +GL+V+
Sbjct: 430 ALEMISEMIR-KGIDPDEITYNSLISCLCR---DGLVDEAIGLLVD 471
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 187/427 (43%), Gaps = 10/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y D L +Y M V VP V +++ L + ++ A ++ M
Sbjct: 91 TTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEE 150
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE---VVLG-LLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
GV PN+F+++ + L + G V+ G ++ GI + V+Y ++D K G
Sbjct: 151 VGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANN 210
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D + +L P TYS+++DG + + ++ M EK + P + +
Sbjct: 211 AEDMFQVLLE-ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS-- 267
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ + G A + ++ I G ++ K + A+ ++ + RG
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + +FVN L + + EE L +D++ RG +P + + + GK +
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ + +K D + L+ + + + H + +L + D AT++ +++
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAY 446
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G + A+++ + MK + +S + I+V RLC E+ K M ++ML MG P
Sbjct: 447 CKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTP 506
Query: 430 ATYKQVI 436
T+K V+
Sbjct: 507 TTHKAVL 513
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 80/465 (17%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D Y+ KGL + ++V R M +P V L+D ++ ++ +A L+ M
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G+ N F L RSG+ E D L
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEA-------------------------------DEL 354
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV---- 191
+ R L P Y+S++DG + K + I M EK SG D V
Sbjct: 355 FKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS-------SGFDVVAYNV 407
Query: 192 -IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I L +GK Y +E + T M+ A KEG + A+++ + + G
Sbjct: 408 LINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA-------------------- 290
+ V LC + E+ LL D++ G+ P
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526
Query: 291 ------------MELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++LS + +++ C G + + ++ KG+L D ++L+ Y
Sbjct: 527 HXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SS 394
C + + KA A+H ++ S +V TY++LL GL ++EA + + MKE +V ++
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ I+VS + +++ +K + EM+ G P TY +IS F
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 164/404 (40%), Gaps = 52/404 (12%)
Query: 46 AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF------- 98
+V N L+D R EI A L M +G +P+ T++ + C+ G
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 99 -EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E+ L L+ + + Y +ID Y K A +EM ++L P TY+ I++G
Sbjct: 76 GEISLVNLEPNV---ITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIMNG 131
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K E + + M E ++P F +YA
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRF----------------SYAT------------- 162
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
++ +L KEG V EA + + RGI Y A ++ L K +
Sbjct: 163 --------LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDM 214
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ ++E +P + S + C G + E LL + +K + + SS+++ Y
Sbjct: 215 FQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTK 274
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+++A+ + K+ + +V Y L+DG FK + A+ +F MK + + ++F
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS-RGLEENNF 333
Query: 398 VI--VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VI V+ L + +A + +M+ G PD Y ++ GF
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 53/367 (14%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P + N +++A ++ + A L M G+ PN T +++ Q LC +G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E + LL+ LV+ F+ P +T+ ++LD
Sbjct: 487 IEKTMDLLND--------MLVMGFH-----------------------PTPTTHKAVLDA 515
Query: 158 ARRYEKTEV----SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+ + + +V D++VG+ V K LS + +I +G A ++FK
Sbjct: 516 SSKSRRADVILHXHDQLVGMGV------KLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ I T ++ +K+A ++ + G++ Y + L +E
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
GL+ + ERG +P A V+ G KE +L ++ KG + + + L+
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME------------EAVR 381
+ +++ +A L +++ + +TYD+L+ G +K + EA R
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749
Query: 382 IFDYMKE 388
+F+ M E
Sbjct: 750 LFEEMNE 756
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 33/310 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V GF P + A+LDA + + + +V GV + T++ + CR G
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGM 556
Query: 98 FE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
V ++ GI + ++ YN +I Y AF ++M ++P TY+
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT-EGVSPNVETYN 615
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L G + + +V M E+ L+P + D ++ +G ++
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNA--TTYDILVSGHGKIGNMKECVKLYCEMI 673
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK-EHQP 271
+ + T ++ +K ++ +A ++ + RGI S Y + K QP
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQP 733
Query: 272 E-----------EVCGLLRDVVERGYIPCAMELS--RFVASQCGKG-----------KWK 307
E E L ++ E+G+IPC L+ F ++ GK K K
Sbjct: 734 ELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK 793
Query: 308 EVEELLSAVL 317
V+ELL+ VL
Sbjct: 794 TVQELLAGVL 803
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 173/395 (43%), Gaps = 52/395 (13%)
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYS 111
AL R + A ++ M + +T+S + LC G+ + + LLD G +
Sbjct: 9 ALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP 68
Query: 112 S-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ V +N++I KKGD A ++ M + P TY+S++ G K + + +
Sbjct: 69 NPVAFNVLISALCKKGDLSRASKLVDNMF-LKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 127
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ MV K +P D T G ++
Sbjct: 128 LNRMVANKCVP-------------------------------------NDITFGTLVDGF 150
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
K GR + +++ + E+G + Y + ++ L KE + E L +++VE+G P
Sbjct: 151 VKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNT 210
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ S + C +GK E +E L + +KG +SF SSLM Y I KAI + +
Sbjct: 211 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 270
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCH 406
+ + Y +L++GL K+G+++EA+ ++ M +L VV+ SS ++ C+
Sbjct: 271 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSS---MIHGFCN 327
Query: 407 LKELRKAMKNHDEMLKMGHK--PDEATYKQVISGF 439
+ + + MK ++ML K PD TY +++ F
Sbjct: 328 AQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 109/250 (43%), Gaps = 1/250 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L +G A +F+ D T ++ L EGR+ EA+ + + G
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ ++ LCK+ L+ ++ +G +P + + V C KGK +
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LL+ ++ + + +L++ + + + + + + +E+ + +Y L+ GL
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
FK+G+ E ++++ M E ++ + ++ LC + +A + EM GH P+
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245
Query: 430 ATYKQVISGF 439
TY ++ G+
Sbjct: 246 FTYSSLMWGY 255
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
M L V + C G + E+ + D+ + D + S+LM C+ +ID+A++L +
Sbjct: 1 MLLIPIVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDE 60
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLK 408
++ + ++VL+ L K G + A ++ D M LK V + ++ +V LC
Sbjct: 61 MQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMF-LKGCVPNEVTYNSLVHGLCLKG 119
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+L KAM + M+ P++ T+ ++ GF+
Sbjct: 120 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFV 151
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/405 (18%), Positives = 147/405 (36%), Gaps = 95/405 (23%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D + G +DG+ V + G+ + ++L+ L+++ + L+ MV G
Sbjct: 146 LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 205
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
PN +S + LCR GK + A + L E
Sbjct: 206 CKPNTIVYSALIDGLCREGKPD------------------------------EAKEYLIE 235
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M N + TP TYSS++ G +F +
Sbjct: 236 MKN-KGHTPNSFTYSSLMWG-------------------------YF------------E 257
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G + A +++K D + ++ L K G++KEA+ ++ + RGI +
Sbjct: 258 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 317
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVV--ERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + ++ C E+ L ++ P + + + + C K ++L+
Sbjct: 318 YSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNT 377
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT-----YDVLLDGL 370
+LD+G D C I ++ L+ ++D D L+ L
Sbjct: 378 MLDQGCDPDFITCD-------------------IFLKTLRDNMDPPQDGREFLDELVVRL 418
Query: 371 FKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAM 414
K R A I + M ++ + S++ + V +LC ++RK +
Sbjct: 419 IKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTI 463
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 197/467 (42%), Gaps = 50/467 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMV 74
SL D S + L M V RM + G P V + N ++ ++Q E+ A L MV
Sbjct: 236 SLCGDSRSQEALDM----VQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMV 291
Query: 75 RDGVSPNKFTWSLVAQILCRS---GKFEVVL-GLLDSGIYS-SVMYNLVIDFYSKKGDFG 129
+ GV P+ T++ + LC++ K E+VL ++D G+ + Y +I YS G +
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWK 351
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ +M + + L PG T++S + ++ +++ ++ I M K +P L
Sbjct: 352 ESAKMFRKMTS-KGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD--LVSYS 408
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ + G+ +F D+ I ++ A +K G + EA+ ++ + +
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y ++ C+ + + ++ G P + + C G +
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528
Query: 310 EELLSAVLDKGL----------LLDSFC--------------------------CSSLME 333
+EL+S ++ KG+ ++ S C +SL++
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID 588
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
YC +++KA + + + DV TY+ L+ G K G++++ + +F M KV
Sbjct: 589 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ IV+ L H A K EM+ G D TYK ++ G
Sbjct: 649 TTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL 695
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/393 (18%), Positives = 176/393 (44%), Gaps = 11/393 (2%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DS 107
L+D R L + ++R G+ + + LC + + + + +L D
Sbjct: 162 LMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDL 221
Query: 108 G-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTE 165
G + +++ YN VI A D + M G +P ++++++ G + +
Sbjct: 222 GCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 281
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ ++ MV+K + P + + ++ L AE++ ++ D+ +E T
Sbjct: 282 KACNLINEMVQKGVEPD--VVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTA 339
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ S G KE+ +++ ++ +G+ + +F++ LCK + ++ + + + +G
Sbjct: 340 IIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKG 399
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
++P + S + +G++ ++ L ++ DKG++ + C + L+ + +D+A+
Sbjct: 400 HMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAM 459
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
+ +++ DV TY L+ + GR+ +A+ F M + + ++ + ++
Sbjct: 460 LVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGF 519
Query: 405 CHLKELRKAMKNHDEMLKMG-HKPDEATYKQVI 436
C +L KA + EM+ G +P+ + +I
Sbjct: 520 CMHGDLVKAKELVSEMMSKGIPRPNIVFFSSII 552
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/466 (19%), Positives = 190/466 (40%), Gaps = 51/466 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ YS G + + +++R M G +P + N+ + +L + + A ++ M
Sbjct: 338 TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTT 397
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G P+ ++S++ G+F + + D GI ++ +N++I ++K+G
Sbjct: 398 KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDE 457
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A EM G+ + P TYS+++ R + E +++ + +E + H L
Sbjct: 458 AMLVFTEM-QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ + + K +EM+ K I ++ +L EGRV +A +++L+
Sbjct: 517 -HGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSS----IIHSLCNEGRVMDAHDVFNLV 571
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK- 305
G + + ++ C + E+ G+L +V G P + + V+ C GK
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631
Query: 306 ------WKEV----------------------------EELLSAVLDKGLLLDSFCCSSL 331
++E+ +++ ++D G +D L
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C N D+AI L K+ + D+ + +++ L+K R EEA +F + +
Sbjct: 692 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGL 751
Query: 392 VSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
V + S++ +++ L + +A M K G P +I
Sbjct: 752 VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 177/400 (44%), Gaps = 9/400 (2%)
Query: 46 AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL 105
V + ++D L ++ + A L M G+ PN T++ + + FE V +L
Sbjct: 214 TVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEML 273
Query: 106 -----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
D +Y++ Y L+I++Y G A +M R + ++SI+ +
Sbjct: 274 RLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLE-RGVEADIHVFTSIISWQCK 332
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ + + + E+ L+ G +I + G+ AAEM+ + +++
Sbjct: 333 LGNMKRAFALFDELNERGLVANAHTYG--ALIHGTCNSGQLDAAEMLVNEMQSQGLDMNL 390
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ K+G + EA+++ ++ ++G Y LCK ++ EE L
Sbjct: 391 VIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFT 450
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+VE+G P A+ + + C +G E E + + KG + ++L++ Y +
Sbjct: 451 MVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGK 510
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVI 399
+ +A L ++E + + D+ TY L+ G G++EEA+ + + + ++ +S ++
Sbjct: 511 LKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTA 570
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++S L +A + +DEM+ G PD+ Y +++
Sbjct: 571 IISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 197/433 (45%), Gaps = 17/433 (3%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++ Y +F +G +V+ M G +C L AL R +++ ++ + MV
Sbjct: 150 MLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEF 209
Query: 77 GVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
V ++ ++V LC+ G+ E ++L + GI +V+ YN +++ Y K DF
Sbjct: 210 KVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGV 269
Query: 132 FD--RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-HFLSGN 188
+ RL EM + +TY+ +++ K ++++ M+E+ + H +
Sbjct: 270 NEMLRLMEM---DKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSI 326
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
KL +M + +A +F + + T G ++ G++ A + + +
Sbjct: 327 ISWQCKLGNMKRAFA---LFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS 383
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWK 307
+G+ + + +N CK+ +E + +DV+E+ G+ + C + +
Sbjct: 384 QGLDMNLVIFNTLINGYCKKGMIDEALRM-QDVMEKKGFENDIFTYNTIAGGLCKLNRHE 442
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E + L +++KG+ ++ + +++ +C + +A + ++K +V TY+ L+
Sbjct: 443 EAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLI 502
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DG K G+++EA R+ D M+ + + S ++ +V C ++ +A+ +E+ + G
Sbjct: 503 DGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLA 562
Query: 427 PDEATYKQVISGF 439
TY +ISG
Sbjct: 563 ISIVTYTAIISGL 575
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 171/383 (44%), Gaps = 18/383 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++V+D KG ++ M G P V N L++A + + + + M
Sbjct: 217 SMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLM 276
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDF 128
D V N T++L+ + SGK +V +L+ G+ + + ++ +I + K G+
Sbjct: 277 EMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNM 336
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG- 187
AF +E+ N R L TY +++ G + + ++ +V M + L +
Sbjct: 337 KRAFALFDEL-NERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNT 395
Query: 188 --NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIY 243
N Y + + D E + + EK ++D T + L K R +EA +
Sbjct: 396 LINGYCKKGMID-------EALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWL 448
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ E+G+ + +++ CKE E + +D+ ++G P + + + K
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKK 508
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
GK KE L + G+ D + ++L+ C ++++A+ L ++ + ++ + TY
Sbjct: 509 GKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTY 568
Query: 364 DVLLDGLFKDGRMEEAVRIFDYM 386
++ GL K+GR EEA R++D M
Sbjct: 569 TAIISGLSKEGRSEEAFRLYDEM 591
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 43/267 (16%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + +++ Y KG+ + L + +M GF + N + L + N
Sbjct: 384 QGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEE 443
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVID 120
A MV GV PN +++++ I C+ G V + G +V+ YN +ID
Sbjct: 444 AKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLID 503
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
YSKKG A+ RL + +T TY++++ G +
Sbjct: 504 GYSKKGKLKEAY-RLKDEMESIGMTSDIYTYTTLVHGECVF------------------- 543
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
GK A + C + + + T ++ LSKEGR +EA
Sbjct: 544 ------------------GKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAF 585
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCK 267
++Y + G+T D Y + V L K
Sbjct: 586 RLYDEMMAAGLTPDDRVYTSLVANLHK 612
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 136/322 (42%), Gaps = 8/322 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+++ Y G + +V+ M G + +++ + ++ A L+ +
Sbjct: 289 TLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNE 348
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFGA 130
G+ N T+ + C SG+ + L++ G+ + V++N +I+ Y KKG
Sbjct: 349 RGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDE 408
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A R+ ++ + TY++I G + + E + R + MVEK + P
Sbjct: 409 AL-RMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAV--SFTI 465
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I G AE +F+ + + T ++ SK+G++KEA ++ + G
Sbjct: 466 MIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIG 525
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T Y V+ C + EE LL +V +G + + ++ +G+ +E
Sbjct: 526 MTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAF 585
Query: 311 ELLSAVLDKGLLLDSFCCSSLM 332
L ++ GL D +SL+
Sbjct: 586 RLYDEMMAAGLTPDDRVYTSLV 607
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 1/217 (0%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
C + + +E +++ + G+ + D + L + Q G + +V
Sbjct: 148 CDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMV 207
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E ++ + C KG+ + ++L+ + KG+ + ++L+ Y +
Sbjct: 208 EFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFE 267
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVV 401
+ +E K + ATY +L++ G++ EA ++F+ M E V + F ++
Sbjct: 268 GVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSII 327
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
S C L +++A DE+ + G + TY +I G
Sbjct: 328 SWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHG 364
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 166/378 (43%), Gaps = 14/378 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+++++C+ G V + G P V + L++ + +I A L+ M
Sbjct: 128 SLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVM 187
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V G PN ++S++ + LCR GK V+ LL+ V+YN ++D K
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +M G + P TY+S++ G R + + + ++ M ++P L
Sbjct: 248 NEAVHIFCKM-KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD--LVAF 304
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I + G+ A +I K + +E T ++ V EA +++ ++
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364
Query: 249 RGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+G R D ++F VN CK + +E L ++ RG IP + + ++ C +
Sbjct: 365 KG---RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E EEL + G + S L++ +D+A+ L +E D+ TY++
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481
Query: 366 LLDGLFKDGRMEEAVRIF 383
++DG+ K G+ ++A +F
Sbjct: 482 MIDGMCKYGKFKDARELF 499
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 173/418 (41%), Gaps = 15/418 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L + M +P++ L AL R + L M G+S + + +++
Sbjct: 74 DALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILI 133
Query: 90 QILCR----SGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CR F V+ ++ G+ +V+ ++ +I+ + +G G A + + M R
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV-ARGY 192
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL---PKHFLSGNDYVIQKLSDMGKT 201
P +YS I+ G R KT ++ L+ K++ P + + ++ +L
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTT---EVIKLLEHMKVVGCEPDVVIY--NTIVDRLCKDRLV 247
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A IF + I T ++ L GR KEA + + + I +
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++++CKE + E +L+ + E G P + + C + + E ++ ++ KG
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ D F S L+ YC ++ID+A L ++ D +Y+ L+ GL + R EA
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427
Query: 382 IFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+F M + ++ I++ L L +AM M G KPD TY +I G
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 153/361 (42%), Gaps = 16/361 (4%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ G + S+++ G + +++ M+V G P V N ++D L +
Sbjct: 186 VMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDR 245
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV--- 118
+ A ++ M G+ P T++ + L G+++ GLL+ ++M +LV
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFS 305
Query: 119 --IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMV 175
ID K+G+ A L M + P +TY+++++G R E E + ++ +M+
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTE-MGVEPDVATYNTLMNGYCLRMEVVE-ARKVFEVMI 363
Query: 176 EKKLLPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
K +P F + N Y K D K EM + + + ++ L +
Sbjct: 364 SKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNT-----LISGLCQ 418
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
R EA +++ + G Y ++ L K+ ++ GL R + G P +
Sbjct: 419 ARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVT 478
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C GK+K+ EL + + KGL +++ C+ ++ C +D+A ++E
Sbjct: 479 YNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538
Query: 353 K 353
K
Sbjct: 539 K 539
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ +N C E + L +V RGY P S + C GK EV +LL +
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G D +++++ C +R +++A+ + K++ V TY L+ GL GR +
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EA + + MK ++ +F +++ +C E+ +A M +MG +PD ATY ++
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343
Query: 437 SGF 439
+G+
Sbjct: 344 NGY 346
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 186/417 (44%), Gaps = 15/417 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
EV M + G P V A + L R + A L + N + ++ V
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333
Query: 93 CRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR+G+ FE++ + GI + Y+++ID KKG A D + EM N+ P
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQS-NVKPS 392
Query: 148 FSTYSSILDGARRYEKTEVSDRI---VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TYSS+ DG + TE+S + +G K + + N +V+Q+ DMG A
Sbjct: 393 LVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQR--DMGS--AC 448
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+++ + + + T ++ K R+ +A++++ ++ + G+ + +
Sbjct: 449 KLVHEMRMNGSVP-NSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADE 507
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+E E L+ +V + G +P + + + C + K ++ E+L +L +
Sbjct: 508 FNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++L++ Y KA+ L+ K+ K+ + TY +L++ +M+EA +F
Sbjct: 568 AIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFK 627
Query: 385 YM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
M K+ V F +++ C + +++ A ++EM + G P+ TY +I G+
Sbjct: 628 EMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYF 684
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 191/425 (44%), Gaps = 17/425 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V+ + G + E+ MR +G P + + L+D L ++ ++ A L MV+
Sbjct: 329 VIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN 388
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
V P+ T+S + LC+SG E+ L + + G V+ YN +I+ + + D G+A
Sbjct: 389 VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSAC 448
Query: 133 DRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
++EM NG P T++ ++ G + ++ + + + +M++ + F + +
Sbjct: 449 KLVHEMRMNGS--VPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC--NIM 504
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ + G + A + D I T ++K L KE + ++A ++ ++ + +
Sbjct: 505 ADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNV 564
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y ++ K+ P + L +++ G P + + + + K +E
Sbjct: 565 FPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYY 624
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L ++ KGL+ D + ++ +C + A AL+ ++ + S +V TY L+DG F
Sbjct: 625 LFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYF 684
Query: 372 KDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K RM++A +F+ MK V ++ ++ + L + +R+ +EM + G P
Sbjct: 685 KIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMF---NEMKENGVFP 741
Query: 428 DEATY 432
+ Y
Sbjct: 742 NYTAY 746
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 170/379 (44%), Gaps = 14/379 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+D Y G ++ M +G N+LLDA R+ + + + M
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 76 DGVSPNKFTWSLVAQILCRS---GKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGA 130
+G+ P T++++ L + K E V + S S Y+ VI+ Y + G+
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--- 187
A + +E C G + P TY ++++G + + E ++ +V M + + +
Sbjct: 267 ASEVFDE-CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 325
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ Y + + D K +MI ++ IEL T + L + R+ EA + ++
Sbjct: 326 DGYCRKNMVD--KALEIKMIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E+G+ Y +++ C E E L R++ G P + + + KG +
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E E + + KGL+ D + ++L+ +C N ++D A+ L ++++ ++ Y L+
Sbjct: 441 EAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 500
Query: 368 DGLFKDGRMEEAVRIFDYM 386
GL K+GR EEA +++D M
Sbjct: 501 SGLAKEGRSEEAFQLYDNM 519
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 171/389 (43%), Gaps = 49/389 (12%)
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGA 130
D V+P + S+V C+SG+ LLD G+ +++ YN ++D Y+++ D
Sbjct: 139 DSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDD-- 194
Query: 131 AFDRLNEMCN---GRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
DR+ EM + P TY+ ++DG AR K E V +++ K+
Sbjct: 195 --DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA--------VFEEMKSKN- 243
Query: 185 LSGNDY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
LSG+ Y VI G A +F IE + T G ++ K G+++ A
Sbjct: 244 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPE---------EVCGLLRDVVERGYIPCAM 291
+ + RG+ + + ++ C+++ + E G+ DV + C +
Sbjct: 304 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 363
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + E + LL +++KG+ + ++L+ +C+ + +A L ++
Sbjct: 364 RRAN---------RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKEL 410
+ TY+V++DG K G + EA R + M++ +V S+ +V C ++
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 474
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A++ +EM + G KP+ Y +ISG
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGL 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD------------------- 257
E DD MLK + EG ++ + Y ++ + RD
Sbjct: 191 EKDDDRVAEMLKVMENEG-IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249
Query: 258 -YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + +N C+ + + V G P + C G+ + E L++ +
Sbjct: 250 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 309
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+G+ ++ +++++ YC +DKA+ + + +EK+ LDV TY+ L GL + RM
Sbjct: 310 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+EA + M E V + S+ ++S C+ ++ +A + EM G +P TY +
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429
Query: 436 ISGFM 440
+ G++
Sbjct: 430 MDGYI 434
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 101/258 (39%), Gaps = 47/258 (18%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D Y K + LE+ +M G V N L L R N + A L M+
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 75 RDGVSPNKFTWSLVAQILCRSGK-------FEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
GV PN +++ + I C G F + G + S V YN+++D Y KKG
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG--NGAEPSLVTYNVMMDGYIKKGS 438
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A NEM + L P +Y++++ G K +V+ R+ M ++ P
Sbjct: 439 IREAERFKNEM-EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV--- 494
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y A ++ L+KEGR +EA Q+Y +
Sbjct: 495 -------------AYTA---------------------LISGLAKEGRSEEAFQLYDNML 520
Query: 248 ERGITVRDSDYYAFVNVL 265
G+T D+ Y A V L
Sbjct: 521 GDGLTPDDALYSALVGSL 538
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
P+ V L VV GY C G+ +LL + G+ +++ C +S
Sbjct: 138 PDSVTPLSASVVVDGY--------------CKSGRVAHARQLLDEMPRHGVKVNALCYNS 183
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L++ Y + D+ +A +K+ + +G V TY +L+DGL + + +F+ MK
Sbjct: 184 LLDAYTREKDDDR-VAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK 242
Query: 390 KVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F V++ C +R+A + DE + G +P+E TY +I+GF
Sbjct: 243 NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF 293
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 186/427 (43%), Gaps = 10/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y D L +Y M V VP V +++ L + ++ A ++ M
Sbjct: 91 TTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEE 150
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
GV PN+F+++ + L + G F + ++ GI + V+Y ++D K G
Sbjct: 151 VGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANN 210
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D + +L P TYS+++DG + + ++ M EK + P + +
Sbjct: 211 AEDMFQVLLE-ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS-- 267
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ + G A + ++ I G ++ K + A+ ++ + RG
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + +FVN L + + EE L +D++ RG +P + + + GK +
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ + +K D + L+ + + + H + +L + D AT++ +++
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAY 446
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G + A+++ + MK + +S + I+V RLC E+ K M ++ML MG P
Sbjct: 447 CKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTP 506
Query: 430 ATYKQVI 436
T+K V+
Sbjct: 507 TTHKAVL 513
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 80/465 (17%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D Y+ KGL + ++V R M +P V L+D ++ ++ +A L+ M
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G+ N F L RSG+ E D L
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEA-------------------------------DEL 354
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV---- 191
+ R L P Y+S++DG + K + I M EK SG D V
Sbjct: 355 FKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS-------SGFDVVAYNV 407
Query: 192 -IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I L +GK Y +E + T M+ A KEG + A+++ + + G
Sbjct: 408 LINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA-------------------- 290
+ V LC + E+ LL D++ G+ P
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526
Query: 291 ------------MELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++LS + +++ C G + + ++ KG+L D ++L+ Y
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SS 394
C + + KA A+H ++ S +V TY++LL GL ++EA + + MKE +V ++
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ I+VS + +++ +K + EM+ G P TY +IS F
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 164/404 (40%), Gaps = 52/404 (12%)
Query: 46 AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF------- 98
+V N L+D R EI A L M +G +P+ T++ + C+ G
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 99 -EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E+ L L+ + + Y +ID Y K A +EM ++L P TY+ I++G
Sbjct: 76 GEISLVNLEPNV---ITYTTLIDAYCKSQCLEDALYMYDEM-TVKSLVPDVVTYTCIMNG 131
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K E + + M E ++P F +YA
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRF----------------SYAT------------- 162
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
++ +L KEG V EA + + RGI Y A ++ L K +
Sbjct: 163 --------LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDM 214
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ ++E +P + S + C G + E LL + +K + + SS+++ Y
Sbjct: 215 FQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTK 274
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+++A+ + K+ + +V Y L+DG FK + A+ +F MK + + ++F
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS-RGLEENNF 333
Query: 398 VI--VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VI V+ L + +A + +M+ G PD Y ++ GF
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 53/367 (14%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P + N +++A ++ + A L M G+ PN T +++ Q LC +G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E + LL+ LV+ F+ P +T+ ++LD
Sbjct: 487 IEKTMDLLND--------MLVMGFH-----------------------PTPTTHKAVLDA 515
Query: 158 ARRYEKTEV----SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+ + + +V D++VG+ V K LS + +I +G A ++FK
Sbjct: 516 SSKSRRADVILHMHDQLVGMGV------KLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ I T ++ +K+A ++ + G++ Y + L +E
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
GL+ + ERG +P A V+ G KE +L ++ KG + + + L+
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME------------EAVR 381
+ +++ +A L +++ + +TYD+L+ G +K + EA R
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749
Query: 382 IFDYMKE 388
+F+ M E
Sbjct: 750 LFEEMNE 756
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 20/299 (6%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V GF P + A+LDA + + ++ +V GV + T++ + CR G
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556
Query: 98 FE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
V ++ GI + ++ YN +I Y AF ++M ++P TY+
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT-EGVSPNVETYN 615
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L G + + +V M E+ L+P + D ++ +G ++
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNA--TTYDILVSGHGKIGNMKECVKLYCEMI 673
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK-EHQP 271
+ + T ++ +K ++ +A ++ + RGI S Y + K QP
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQP 733
Query: 272 E-----------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
E E L ++ E+G+IPC L+ + GK + + +L+ + K
Sbjct: 734 ELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ A +EG ++EA +I + ++++G+ Y A +N LCK+ + G+L ++
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G P + + C + + E +E+ +L +G++ D SSLM + NR +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFVIV 400
D+A+ ++K D Y VL+ G ++G M EA++I D M E V+ ++ +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ LC K L A K DEM++ G PD T+ +I G
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 220
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 161/362 (44%), Gaps = 44/362 (12%)
Query: 84 TWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM 138
T++ + CR G FE++ + D G+ S+ YN +I+ KKG + A L EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
N L+P +TY+++L + R + + I G M+ + ++P D V
Sbjct: 63 LN-IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP-------DLV------- 107
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ ++ S+ + +A+ + + + G+ + Y
Sbjct: 108 -----------------------SFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 144
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ C+ E + +++E+G + + + + C + + ++L +++
Sbjct: 145 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 204
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
+G L D + ++L+ +C + + KA++L + + D+ Y+ L+DG K G ME+
Sbjct: 205 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 264
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A ++D M K+ + ++ I+++ C + + +A + D M++ G KP T VI
Sbjct: 265 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 324
Query: 438 GF 439
G+
Sbjct: 325 GY 326
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 128/318 (40%), Gaps = 23/318 (7%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG+ ++ L + G P + N LL R++ A ++G M+R GV P+ +
Sbjct: 56 KGILIEMLNI-------GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVS 108
Query: 85 WSLVAQILCRSGKFEVVL---------GLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+S + + R+ + L GL + +V+Y +++ Y + G+ A
Sbjct: 109 FSSLMAVFSRNRHLDQALVYFRDMKKFGL----VPDNVIYTVLMHGYCRNGNMLEALKIR 164
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+EM + Y++IL+G + + +D++ MVE+ LP + +I
Sbjct: 165 DEMLE-QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT--LIHGH 221
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G A +F I+ ++ K G +++A +++ + R I
Sbjct: 222 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 281
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N C E L ++E+G P + + + C G + +E L
Sbjct: 282 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341
Query: 316 VLDKGLLLDSFCCSSLME 333
++ KG+ D ++L+
Sbjct: 342 MIAKGVAPDHISYNTLIN 359
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + +L+ + + D +++ M G +P L+ + + A L+G M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
+ + P+ ++ + C+ G+ E L D I + + Y ++I+ Y G
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
AF RL ++ + + P T ++++ G R + +D +G M+ K + P H
Sbjct: 298 SEAF-RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 351
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 182/427 (42%), Gaps = 44/427 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL G++ EV++ M +G P V + L+ R EI A +Y M G
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAF 132
+ P+ ++S + + R GK + + L + V+Y +VI + + G A
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+EM G P TY+++L+G L E++LL
Sbjct: 291 RVRDEMV-GCGCLPDVVTYNTLLNG---------------LCKERRLL------------ 322
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
AE + + + T ++ EG++ +A+Q++ + + +
Sbjct: 323 ----------DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ +C++ ++ L D+ R P + S + S C KG+ ++
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 432
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L +++KG+L + +S+++ YC + + K K+ K S D+ TY+ L+ G K
Sbjct: 433 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+ +M +A ++ + M++ KV ++ ++++ +++A ++M G +PD T
Sbjct: 493 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 552
Query: 432 YKQVISG 438
Y +I+G
Sbjct: 553 YMSMING 559
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 168/404 (41%), Gaps = 48/404 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEV 100
P V N ++DA +R + A L +MV G+ P T++ V + LCRSG +EV
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187
Query: 101 VLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ D G+ V + ++I + + G+ A EM R + P ++S ++
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM-RHRGIKPDLVSFSCLIGLFA 246
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R K + + + M L+P D VI + G A M + + ++
Sbjct: 247 RRGKMDHAMAYLREMRCFGLVP-------DGVIYTMVIGGFCRAGLM------SDALRVR 293
Query: 220 DDT--CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D+ CGC+ ++ Y +N LCKE + + GL
Sbjct: 294 DEMVGCGCLPDVVT--------------------------YNTLLNGLCKERRLLDAEGL 327
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L ++ ERG P + + C +GK + +L +L++ L D ++L++ C
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
+DKA L + + + TY +L+D + G++E+A D M ++ + +
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ C + K K +M+ PD TY +I G++
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 491
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++ Y +G L+++ M P + N L+D + RQ ++ A+ L+ M
Sbjct: 342 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 401
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF 128
+ PN T+S++ C G+ E G LD GI ++M YN +I Y + G+
Sbjct: 402 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
L +M + ++P TY++++ G + +K + +++ +M ++K+ P +
Sbjct: 462 SKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD--VVTY 518
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I S G A IF++ C + IE T M+ G KEA Q++ + +
Sbjct: 519 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 578
Query: 249 RGI-TVRDSDYYAFVNV 264
RG R + FVN+
Sbjct: 579 RGKEKRRAAGTVQFVNI 595
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 123/310 (39%), Gaps = 43/310 (13%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ + GL D L V M G +P V N LL+ L ++ + A L M
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
GV P+ T++ + C GK + L L D+ + V YN +ID ++GD
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL--MVEKKLLPK------ 182
A D ++M + R + P TYS ++D EK +V D L M+ K +LP
Sbjct: 394 ANDLWDDM-HSREIFPNHVTYSILIDS--HCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 183 ----HFLSGN-----------------------DYVIQKLSDMGKTYAAEMIFKRACDEK 215
+ SGN + +I K + A + EK
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
++ T ++ S G V+EA I+ + +GI Y + +N +E
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570
Query: 276 GLLRDVVERG 285
L ++++RG
Sbjct: 571 QLHDEMLQRG 580
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D +I+ + K A F+ D ++ + +L ALS+ G A Y L+
Sbjct: 29 DLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFS 88
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
V V+ CK + ++V ++ ++ +R P + + V ++ G +
Sbjct: 89 SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 148
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L+ +++ KGL +S+++ C + DKA + +++ + DV ++ +L+
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + G +EEA++I+ M+ + SF ++ ++ AM EM G P
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 428 DEATYKQVISGF 439
D Y VI GF
Sbjct: 269 DGVIYTMVIGGF 280
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 17/349 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + +D + E++LA + +M RD +SPN T++ + C++G EV + L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 105 LDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ V Y +ID + KKG+ A + + M R + P Y++I+DG
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR-VEPNSLVYTTIIDGFF 279
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++ + + + M+ + + + ++ +I L GK A I + EK +L
Sbjct: 280 QRGDSDNAMKFLAKMLNQGM--RLDITAYGVIISGLCGNGKLKEATEIVEDM--EKSDLV 335
Query: 220 DDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D M+ A K GR+K A+ +YH + ERG ++ + K Q E +
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE--AI 393
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ +E+ + + + + C +G + EVE L S + + GL+ D F +S + C
Sbjct: 394 VYFCIEKAN---DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ A L ++ + LD+ Y L+ GL G M EA ++FD M
Sbjct: 451 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 159/383 (41%), Gaps = 38/383 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ ++D Y G + +Y+ MR V AL+D ++ E++ A +Y M
Sbjct: 200 TFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V D V PN S++Y +ID + ++GD A
Sbjct: 260 VEDRVEPN------------------------------SLVYTTIIDGFFQRGDSDNAMK 289
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
L +M N + + + Y I+ G K + + IV M + L+P + ++
Sbjct: 290 FLAKMLN-QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT--MMN 346
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
G+ AA ++ + + E M+ ++K G++ EAI +Y I +
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEK----A 401
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
D Y ++ LCKE EV L + E G +P + ++A C +G + +L
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ ++ +GLLLD ++L+ S + +A + ++ S D A +D+L+ K+
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 374 GRMEEAVRIFDYMKELKVVSSSS 396
G M A + M+ +V++ S
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAVS 544
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 159/407 (39%), Gaps = 52/407 (12%)
Query: 41 YGFV--PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF 98
+GF+ P + + N+L + + + G M++ SPN T+S C+SG+
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGEL 179
Query: 99 EVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
++ L D+ + V + +ID Y K GD A EM R ++ TY++
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR-MSLNVVTYTA 238
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++DG + + + ++ + MVE ++ P + +I G + A + +
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT--IIDGFFQRGDSDNAMKFLAKMLN 296
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ + L G ++ L G++KEA +I + + + + +N K + +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ ++ERG+ P + LS + G+ E +
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA----------------------IV 394
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
Y+C I+KA + Y VL+D L K+G E R+F + E +V
Sbjct: 395 YFC----IEKA--------------NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ LC L A K M++ G D Y +I G
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 158/367 (43%), Gaps = 12/367 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+ +R +P CN + L N L+ +V G +P++ +++ V
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 90 QILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM--CNGR 142
+C+ G+ ++V + G V+ YN +ID + + GD +A L + +G
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLM-VEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P +++S+ +G + K ++ D + M V K + ++ + + I G+
Sbjct: 124 ICKPDIVSFNSLFNG---FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTW-IDTFCKSGEL 179
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A F + + T C++ K G ++ A+ +Y + +++ Y A
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ CK+ + + + +VE P ++ + + +G + L+ +L++G+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD ++ C N ++ +A + +EK D+ + +++ FK GRM+ AV
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 382 IFDYMKE 388
++ + E
Sbjct: 360 MYHKLIE 366
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+L+S RG T S + + V+ +CK Q + ++ + G P + + + C
Sbjct: 46 YLVS-RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRN 104
Query: 304 GKWKEVEELLSAV-LDKGLLL--DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
G + +L ++ G + D +SL + + +D+ + +++ + S +V
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNV 163
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
TY +D K G ++ A++ F MK + + +F ++ C +L A+ + E
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 420 MLKMGHKPDEATYKQVISGF 439
M ++ + TY +I GF
Sbjct: 224 MRRVRMSLNVVTYTALIDGF 243
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 8/316 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS L+ ++H F + + + M+ YGF+P V +CNA L +L + +A
Sbjct: 165 DSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALA 224
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLLDSGIYSS--VMYNLVIDFYS 123
Y M R + PN +T +LV C+ G+ + VV + + +S YN +I Y
Sbjct: 225 FYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYC 284
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
KG +A +L + + P T++++++G + K + + ++ G M L P
Sbjct: 285 NKGLLSSAM-KLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTT 343
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I S G +F+ +++ T ++ L KEG+ K+A +
Sbjct: 344 VTY--NILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV 401
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ E+G+ S + A + C + Q E + + +++ + PC +++ C
Sbjct: 402 RELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCEN 461
Query: 304 GKWKEVEELLSAVLDK 319
+ +LL +L++
Sbjct: 462 EDYDGAVQLLEEMLNR 477
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 200 KTYAAEMIFKRACDEKIELQD-------DTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
KT+A F+ A D ++D ++C L +L R A+ Y + I
Sbjct: 176 KTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIY 235
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ CK + ++ + ++ G+ P + +A C KG +L
Sbjct: 236 PNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKL 295
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
S + G+ D ++L+ +C ++ +A L +++ + S TY++L++G K
Sbjct: 296 RSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSK 355
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G E R+F+ M +V + ++ ++ LC + +KA E+ + G P+ +T
Sbjct: 356 AGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNAST 415
Query: 432 YKQVISG 438
+ +I G
Sbjct: 416 FSALIYG 422
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 103/245 (42%), Gaps = 8/245 (3%)
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
D+ + EM R L C C K GR+ +A ++ + G + +
Sbjct: 220 DIALAFYREMRRSRIYPNSYTLNLVICAC-----CKLGRLDKANVVFEEMGTMGFSPNVA 274
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + C + L R V+E+ G P + + V C GK +E +L
Sbjct: 275 SYNTLIAGYCNKGLLSSAMKL-RSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGE 333
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ L + + L+ Y + L ++ + + D+ TY+ L+ GL K+G+
Sbjct: 334 MKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGK 393
Query: 376 MEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
++A + + E +V ++S+F ++ C K+ +A + + M+K P + T++
Sbjct: 394 TKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRM 453
Query: 435 VISGF 439
++S F
Sbjct: 454 LLSTF 458
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K++ + + D G L C++ + + + D A+A + ++ + + + T +
Sbjct: 183 KFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLN 242
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+++ K GR+++A +F+ M + + +S+ +++ C+ L AMK M K
Sbjct: 243 LVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKN 302
Query: 424 GHKPDEATYKQVISGF 439
G PD T+ +++GF
Sbjct: 303 GVPPDVVTFNTLVNGF 318
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 186/427 (43%), Gaps = 10/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D Y D L +Y M V VP V +++ L + ++ A ++ M
Sbjct: 91 TTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEE 150
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
GV PN+F+++ + L + G F + ++ GI + V+Y ++D K G
Sbjct: 151 VGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANN 210
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D + +L P TYS+++DG + + ++ M EK + P + +
Sbjct: 211 AEDMFQVLLE-ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS-- 267
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ + G A + ++ I G ++ K + A+ ++ + RG
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + +FVN L + + EE L +D++ RG +P + + + GK +
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ + +K D + L+ + + + H + +L + D AT++ +++
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAY 446
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+G + A+++ + MK + +S + I+V RLC E+ K M ++ML MG P
Sbjct: 447 CKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTP 506
Query: 430 ATYKQVI 436
T+K V+
Sbjct: 507 TTHKAVL 513
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 80/465 (17%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D Y+ KGL + ++V R M +P V L+D ++ ++ +A L+ M
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G+ N F L RSG+ E D L
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEA-------------------------------DEL 354
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV---- 191
+ R L P Y+S++DG + K + I M EK SG D V
Sbjct: 355 FKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS-------SGFDVVAYNV 407
Query: 192 -IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I L +GK Y +E + T M+ A KEG + A+++ + + G
Sbjct: 408 LINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA-------------------- 290
+ V LC + E+ LL D++ G+ P
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526
Query: 291 ------------MELSRF---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++LS + +++ C G + + ++ KG+L D ++L+ Y
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SS 394
C + + KA A+H ++ S +V TY++LL GL ++EA + + MKE +V ++
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ I+VS + +++ +K + EM+ G P TY +IS F
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 164/404 (40%), Gaps = 52/404 (12%)
Query: 46 AVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF------- 98
+V N L+D R EI A L M +G +P+ T++ + C+ G
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 99 -EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E+ L L+ + + Y +ID Y K A +EM ++L P TY+ I++G
Sbjct: 76 GEISLVNLEPNV---ITYTTLIDAYCKSQCLEDALYMYDEMTV-KSLVPDVVTYTCIMNG 131
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K E + + M E ++P F +YA
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRF----------------SYAT------------- 162
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
++ +L KEG V EA + + RGI Y A ++ L K +
Sbjct: 163 --------LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDM 214
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ ++E +P + S + C G + E LL + +K + + SS+++ Y
Sbjct: 215 FQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTK 274
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+++A+ + K+ + +V Y L+DG FK + A+ +F MK + + ++F
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS-RGLEENNF 333
Query: 398 VI--VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VI V+ L + +A + +M+ G PD Y ++ GF
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 53/367 (14%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR G P + N +++A ++ + A L M G+ PN T +++ Q LC +G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
E + LL+ LV+ F+ P +T+ ++LD
Sbjct: 487 IEKTMDLLND--------MLVMGFH-----------------------PTPTTHKAVLDA 515
Query: 158 ARRYEKTEV----SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+ + + +V D++VG+ V K LS + +I +G A ++FK
Sbjct: 516 SSKSRRADVILHMHDQLVGMGV------KLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ I T ++ +K+A ++ + G++ Y + L +E
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
GL+ + ERG +P A V+ G KE +L ++ KG + + + L+
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME------------EAVR 381
+ +++ +A L +++ + +TYD+L+ G +K + EA R
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749
Query: 382 IFDYMKE 388
+F+ M E
Sbjct: 750 LFEEMNE 756
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 124/310 (40%), Gaps = 33/310 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M V GF P + A+LDA + + ++ +V GV + T++ + CR G
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556
Query: 98 FE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
V ++ GI + ++ YN +I Y AF ++M ++P TY+
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT-EGVSPNVETYN 615
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L G + + +V M E+ L+P + D ++ +G ++
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNA--TTYDILVSGHGKIGNMKECVKLYCEMI 673
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK-EHQP 271
+ + T ++ +K ++ +A ++ + RGI S Y + K QP
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQP 733
Query: 272 E-----------EVCGLLRDVVERGYIPCAMELS--RFVASQCGKG-----------KWK 307
E E L ++ E+G+IPC L+ F ++ GK K K
Sbjct: 734 ELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK 793
Query: 308 EVEELLSAVL 317
V+ELL+ VL
Sbjct: 794 TVQELLAGVL 803
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 194/472 (41%), Gaps = 47/472 (9%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + +A + V+ YS G + ++V MM+ G P + CN + L N++ A
Sbjct: 166 GIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKA 225
Query: 67 -------------------SCLY----------------GAMVRDGVSPNKFTWSLVAQI 91
+CL M G P+K ++ V
Sbjct: 226 LRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGF 285
Query: 92 LCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC+ + + V L++ + + V YN ++ SK G A + L E R
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRET-EERGFQ 344
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
YS+I++ + + + IV M+ K P + V+ L +GK A+
Sbjct: 345 VDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPD--VVTYTAVVNGLCKVGKVEEAK 402
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ ++ + + +L L + G EA ++ + E T Y ++ L
Sbjct: 403 KMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGL 462
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+E + E C ++R+++ +G+ P +E++ + S C + K E ++ + L++G +++
Sbjct: 463 RREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNA 522
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA-VRIFD 384
++++ +C + ID A++L + D T+ ++D L K GR+EEA V
Sbjct: 523 VNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMK 582
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+K+ + ++ V+ + C + + + +K +ML Y QVI
Sbjct: 583 MLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKML--SRSKCRTAYNQVI 632
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 154/387 (39%), Gaps = 43/387 (11%)
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM 114
R ++R A + M + GV PN + +L + K E L L+ GI +V+
Sbjct: 183 RAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVV 242
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I Y A + + EM + P +Y +++ G
Sbjct: 243 TYNCLIKGYCDLYQVEHAMELIAEM-PFKGCPPDKVSYYTVM----------------GF 285
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ + K + + ++ K D K+ T ++ LSK
Sbjct: 286 LCQDKRIKE--------------------VRNLMEKMVKDNKLFPDQVTYNTLVHMLSKH 325
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G EA++ ERG V Y A VN C + + + ++ +++ +G P +
Sbjct: 326 GHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTY 385
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ V C GK +E +++L + G ++ ++L+ C + +A + E+
Sbjct: 386 TAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEE 445
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRK 412
+ + TY V++ GL ++G++ EA + M + + +++ LC +++ +
Sbjct: 446 DWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNE 505
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A K +E L G + + VI GF
Sbjct: 506 AKKFMEECLNRGCAVNAVNFTTVIHGF 532
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 4/253 (1%)
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+V+ S GK A + +E C + L ++++A++ +
Sbjct: 176 HVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLV 235
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GIT Y + C +Q E L+ ++ +G P + + C + KEV
Sbjct: 236 GITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEV 295
Query: 310 EELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L+ ++ D L D ++L+ + D+A+ + E+ +D Y +++
Sbjct: 296 RNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVN 355
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GRM+ A I + M K S ++ VV+ LC + ++ +A K +M K G K
Sbjct: 356 SFCMQGRMDRAKEIVNEMIT-KGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCK 414
Query: 427 PDEATYKQVISGF 439
P+ +Y +++G
Sbjct: 415 PNTVSYTALLNGL 427
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 10/277 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+ +G + +V R M GF P N L+ +L + ++ A +
Sbjct: 456 SVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLN 515
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGA 130
G + N ++ V C+S + L LLD + +V + +ID KKG
Sbjct: 516 RGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEE 575
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M + L P TY +++ + + E +++G M+ + + +
Sbjct: 576 ATVYTMKMLK-KGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS----KCRTAYNQ 630
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI+KL + G AA+ + + +TC ++++ +G A ++ + +R
Sbjct: 631 VIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRN 690
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+ L E + EE L+ V+RG I
Sbjct: 691 LIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNI 727
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 194/444 (43%), Gaps = 20/444 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + + +++ G M+ + M V G + C ++D L++ + + A
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDF 121
++ +++ ++PN T+S + C+ GK E+ +L V N+ +I+
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y+KKG A D L EM RN+ P Y+ ++DG + + +V+D M ++L
Sbjct: 506 YAKKGMLSKAVDVLREMVQ-RNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + D ++ L +G+ A + + I+ ++ KEG A+
Sbjct: 565 SNVIF--DILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622
Query: 242 IYHLISERGITVRDSDYYAFVNVLCK--EHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I + E+ I Y A + L + ++ P VC + +E G P + + + +
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRM---IELGLAPDCITYNTIINT 679
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C KGK ++ ++L+ + G++ ++ + L+ C ++KA + ++ ++
Sbjct: 680 YCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPT 739
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCHLKELRKAMK 415
T+ L+ R E+A +I ++L +S + + +++ C L RKA
Sbjct: 740 PITHKFLVKAY---SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
DEM+K G D TY +I G+
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGY 820
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 180/435 (41%), Gaps = 26/435 (5%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + MR G VP + N LL + +Y M+ GV P+ F+ ++
Sbjct: 75 FSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNV 134
Query: 88 VAQILCRSGKFEVVLGLL---DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ LC+ G ++ LG L D +V YN VI + +KG F L+EM R L
Sbjct: 135 LVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVK-RGL 193
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
T + ++ G R + ++ ++ +V+ + + G + +I + G A
Sbjct: 194 CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKD--VIGLNTLIDGYCEAGLMSQA 251
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI----------SERGITVR 254
+ + + +++ T +LKA K G + A +++ I + +
Sbjct: 252 TELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQ 311
Query: 255 DS---------DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ Y + CK EE L + ++ G +P + S + C GK
Sbjct: 312 NEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E L + + GL + ++++ + ++ +A L ++ S D+ T
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++DGLFK G+ +EA +F+ + +L + + ++ ++ C L ++ A +M K
Sbjct: 432 VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491
Query: 425 HKPDEATYKQVISGF 439
P+ T+ +I+G+
Sbjct: 492 VPPNVITFSSIINGY 506
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 175/445 (39%), Gaps = 32/445 (7%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ KGL G + M G CN L+ R ++ A + +V GV+ +
Sbjct: 172 FCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKD 231
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLN 136
+ + C +G L+++ S V YN ++ + K GD A N
Sbjct: 232 VIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN 291
Query: 137 EMCNG------------------RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
E+ +NL P TY++++ ++ E S + M+
Sbjct: 292 EILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNG 351
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
++P + ++ GK A ++F+ + ++ + ++ +L K GRV E
Sbjct: 352 IMPDVVTCSS--ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 409
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + + RGI+ ++ L K + +E + +++ P + S +
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK + E +L + + + + SS++ Y + KA+ + ++ +
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV----SSSSFVIVVSRLCHLKELRKAM 414
+ Y +L+DG FK G + A D+ KE+K S+ F I+++ L + + +A
Sbjct: 530 NTIVYAILIDGYFKAGEQDVAD---DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+M G PD Y +I G+
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGY 611
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 177/432 (40%), Gaps = 38/432 (8%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+A SL++D YS G P + +L+D +++ A +
Sbjct: 584 EARSLIIDMYSK-----------------GIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
M + + ++ + + L R GK++ V +++ G+ + YN +I+ Y KG
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKT 686
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D LNEM + P TY+ ++ G + E ++ + M+ + +P +
Sbjct: 687 EDALDILNEM-KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPI--TH 743
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++++ S K I ++ +EL ++ + G ++A + + +
Sbjct: 744 KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 803
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG---- 304
RGI+ Y A + C E+ + G P + + G
Sbjct: 804 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 863
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+E E+L+S + ++GL+ ++ L+ Y K I LHI++ + TY+
Sbjct: 864 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 923
Query: 365 VLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVS---RLCHLKELRKAMKNHDE- 419
VL+ K G+M EA + D + + ++ +S ++ I+ L + E+ +++K E
Sbjct: 924 VLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEI 983
Query: 420 -----MLKMGHK 426
+++MG K
Sbjct: 984 EVKKLLIEMGRK 995
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 202/541 (37%), Gaps = 110/541 (20%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + ++ Y KG + ++R G CNALL R +++R
Sbjct: 173 EGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRK 232
Query: 66 -----------------------------ASCLYGA------MVRDGVSPNKFTWSLVAQ 90
A C+ A MV DG S N T++L+ +
Sbjct: 233 ACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIK 292
Query: 91 ILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDF----------------- 128
LC+ G+ GLLD G+ SV YN +ID Y K G
Sbjct: 293 GLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNP 352
Query: 129 -------------GAAFDRLNEMCNG---RNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
G D E+ NG R TP T++++++G + E+ + + R+
Sbjct: 353 DDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKS 412
Query: 173 LMVE--------------------------KKLLPKHFLSG-------NDYVIQKLSDMG 199
M+ K+ L + F +G +I +G
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVG 472
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA +FK E T G ++ L ++ ++ +A+ + + E GIT Y
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYT 532
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ CK+H+ + L + + G P + + C G+ EE S ++ K
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRK 589
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G++L +SL++ + D A L K+ D+ TY VLL L K ++ EA
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEA 649
Query: 380 VRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ I D M V + ++ I++S + + A +EM+ GHKP TY IS
Sbjct: 650 LSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709
Query: 439 F 439
+
Sbjct: 710 Y 710
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 185/466 (39%), Gaps = 67/466 (14%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E M G P V +++D + + A ++ M +G PN +T+ + L
Sbjct: 444 ETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503
Query: 93 CRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ K + L+ + GI V+ Y +I KK +F AF RL EM LTP
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF-RLFEMMEQNGLTPD 562
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAE 205
Y+ + D + + E +V K ++ L+ Y ++ S G T A
Sbjct: 563 EQAYNVLTDALCKSGRAE---EAYSFLVRKGVV----LTKVTYTSLVDGFSKAGNTDFAA 615
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
++ ++ +E + T +L+AL K+ ++ EA+ I ++ G+ Y ++ +
Sbjct: 616 VLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEM 675
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG----- 320
KE + + L +++ G+ P A + F++S C G+ +E E L+ + G
Sbjct: 676 IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDV 735
Query: 321 ---------------------------------------LLLDSFCCSSLME-YYCSNRQ 340
LLL F SL+ +Y
Sbjct: 736 VTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSG 795
Query: 341 IDKAIALHIKIEKLKGSL------DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
+ I L++ + L+ + V TY ++ G K R+EEA + D+M + +
Sbjct: 796 MWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 855
Query: 395 SS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +++ C +K KA+ +M++ G +P +Y +I G
Sbjct: 856 EEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGL 901
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 17/336 (5%)
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS--SILDGARRYEKTEVSDR 169
+V YN +I Y KKG A C R TY+ ++L G Y +T +
Sbjct: 179 TVTYNTMIMAYCKKGSLAIAH---RYFCLLRESGMQMDTYTCNALLLG---YCRTSDLRK 232
Query: 170 IVGLMVEKKLLPKHFLSGNDY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
L++ ++P N+Y +IQ L + A ++ + L T
Sbjct: 233 ACWLLM---MMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTL 289
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K L KEGR+ +A + + RG+ Y A ++ CK + ++ G+ + + G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + CG GK E EELL+ + +G ++L+ YC +ID A+
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
+ + LD+ Y VL++ L K R++EA + M + + ++ ++
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGY 468
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C + + A++ M G P+ TY +I G +
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 145/368 (39%), Gaps = 28/368 (7%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E Y + G V +L+D + A+ L MV +G + +T+S++ Q L
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640
Query: 93 CRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ K L +LD SG+ +++ Y ++I K+G A NEM + + P
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH-KPS 699
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+TY+ + + + E ++ ++G M + P + + I MG A
Sbjct: 700 ATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPD--VVTYNIFINGCGHMGYIDRAFST 757
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVK-------------EAIQIYHLIS---ERGI 251
KR D E T +LK K + E ++ L+ + G+
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL 817
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + + CK + EE C LL ++ + P + + C + +
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVS 877
Query: 312 LLSAVLDKGLL--LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++ +++ G L+S+ L+ C D+A +L + + + + + +L DG
Sbjct: 878 FVTDMIEFGFQPQLESY--HYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935
Query: 370 LFKDGRME 377
L K G ++
Sbjct: 936 LLKAGHVD 943
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+AIQ + + + + Y + L + E + L +V+ G +P + + +
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG- 356
+ C KG + + G+ +D++ C++L+ YC + KA L + + L G
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL-LMMMPLMGC 245
Query: 357 -----------------------------------SLDVATYDVLLDGLFKDGRMEEAVR 381
SL++ TY +L+ GL K+GR+ +A
Sbjct: 246 RRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARG 305
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ D M VV S ++ ++ C ++ A+ M + G PD+ TY +I G
Sbjct: 306 LLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 178/405 (43%), Gaps = 12/405 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EV 100
P+ S+ NALL L + LA + + +R VSP+ +T++ V LCR G+ +V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 101 VLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFD---RLNEMCNGRNLTPGFSTYSSILD 156
+ G+ SV YN +ID Y KKG G + L EM ++P T+ +++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA-GISPTAVTFGVLIN 272
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + T + R+ M ++ + + + +I L GK + + D +
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAAS--VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T GC+LK K+G + +A ++ER + Y ++V + + E+
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ + ++G P + + G W+ LL + +KG+ D + L+ C
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSS 395
++ KA+ L ++ ++ + TY+ ++ G G ++ A I M++ K +
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ + + C + ++ +A +EML P+ TY+ + G M
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 155/363 (42%), Gaps = 48/363 (13%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQ---NEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+V + ++ +G P+V+ N+L+D ++ + L MV G+SP T+ ++
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271
Query: 90 QILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C++ + + + GI +SV+ YN +I +G + EM L
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM-EDLGL 330
Query: 145 TPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
+P T+ +L G ++ + +D I G M E+ + P D VI +
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDG-MTERNVEP-------DVVIYNI-------- 374
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
++ + G++++A+ + ++++GI+ + Y +
Sbjct: 375 ----------------------LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLIT 412
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
+ GLL ++ E+G + + + + C KG+ ++ +LL + + GL
Sbjct: 413 GFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ +++++ +C I A + ++EK + +V TY+V + + G+M+EA +
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532
Query: 384 DYM 386
+ M
Sbjct: 533 NEM 535
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 14/300 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P L++ + + A ++ M + G++ + T++ + LC GK E
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 102 LGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L+ D G+ + + + V+ + KKG A D ++ M RN+ P Y+ ++D
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE-RNVEPDVVIYNILID 377
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
RR K E + + M +K + P ++ + +I S G +A + ++ I
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPN--VTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE---E 273
E T ++ AL +G V++A+++ +SE G+ Y + C + + E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ + +R + + + F+ C GK E +LL+ +LDK L+ + ++ E
Sbjct: 496 IRTRMEKCRKRANV---VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKE 552
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL + KG+ D + M P V N L+D R ++ A + AM + G
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
+SPN T++ + RSG + GLLD GI + V+ YN++I KG+ A
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG 157
L+EM L P TY++I+ G
Sbjct: 460 KLLDEMSE-VGLEPNHLTYNTIIQG 483
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 120/287 (41%), Gaps = 8/287 (2%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ Y + V+ M+ G +V N+L+ L + ++
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDF 121
L M G+SPN+ T+ V + C+ G + + G+ + + V+YN++ID
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDV 378
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y + G A + E + ++P +TY+ ++ G R + ++ M EK +
Sbjct: 379 YRRLGKMEDAM-AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI-- 435
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + + +I L G+ A + + +E T +++ +G +K A +
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
I + + Y F+ C+ + +E LL +++++ +P
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 8 RDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R+ + D + ++++D Y G D + V M G P V+ N L+ R + R
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID 120
AS L M G+ + T++++ LC G+ + LLD G+ + + YN +I
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482
Query: 121 FYSKKGDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ KG+ +A++ M C R TY+ + + K + ++ ++ M++K
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKR---ANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
L+P +G Y K M K Y ++ R C
Sbjct: 540 LVP----NGITYETIKEGMMEKGYTPDI---RGC 566
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 179/431 (41%), Gaps = 9/431 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L +++D Y G +V MM G P CN LL L R + + L L G M
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFG 129
G+ P+ +T+S + C++ F+ + + + V YN++I + G
Sbjct: 238 GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 297
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF EM + L+P TY ++++G + + + + ++ M L P +
Sbjct: 298 EAFGFKEEMVD-YGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT- 355
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ GK A I ++ +++ L K G++ A ++ + + +
Sbjct: 356 -LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y+ + + + + LL ++ G +P A + C G+ KE
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LL ++ +GL ++F + L+ + I A + K D+ Y+ L+ G
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L GR+EEA + +++ +V ++ ++ C + L KA + +ML G KP+
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPN 594
Query: 429 EATYKQVISGF 439
TY ++ G+
Sbjct: 595 ADTYTDLLEGY 605
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 174/408 (42%), Gaps = 11/408 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P V L+D ++ + A + M+ GV PNK + + + LC+ G+
Sbjct: 341 MSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ 400
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
LL+ I + Y+ ++ + + D AF+ LNEM N + P TY
Sbjct: 401 LGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNS-GILPNAYTYG 459
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++G + +++ + ++ M+ + L P F+ +I S G A +
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP--LIIGHSKEGHISLACESLENMT 517
Query: 213 DEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ L D C ++K LS GR++EA + Y + +RG+ + Y ++ CK
Sbjct: 518 KANV-LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E+ LL+ ++ G P A + + ++V +L ++L G D+ +
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELK 390
+ + ++ A + ++EK D+ Y L+ GL K ME+AV + D M KE
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++ C ++ +A D +L G P+ TY +I G
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDG 744
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 182/441 (41%), Gaps = 40/441 (9%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M++V G P + L+ ++ + A L M G+ PN +T+ ++ LC++G
Sbjct: 411 MIKV-GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNG 469
Query: 97 KFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + LL+ I ++ MY +I +SK+G A + L M N+ P Y
Sbjct: 470 ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA-NVLPDLFCY 528
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------------LSGNDYVIQKLSD 197
+S++ G + E ++ + ++ L+P F L D ++Q++ +
Sbjct: 529 NSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLN 588
Query: 198 MG-----KTYA--AEMIFKRACDEKIE--LQ----------DDTCGCMLKALSKEGRVKE 238
G TY E FK EK+ LQ + G +++ LS+ ++
Sbjct: 589 SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 648
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A + + + G+ Y + ++ LCK E+ GLL ++ + G P + + +
Sbjct: 649 AFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALID 708
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G + ++L KGLL + ++L++ C N I A L+ + +
Sbjct: 709 GFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAP 768
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
D Y+VL G +E+A+ + + M S F +V C L++ K
Sbjct: 769 DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLH 828
Query: 419 EMLKMGHKPDEATYKQVISGF 439
M+ P+ T + VI+ F
Sbjct: 829 VMMDREIVPNAQTVENVITEF 849
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 158/368 (42%), Gaps = 19/368 (5%)
Query: 4 SCEGRDSQSDALSLV-LDCYSH--KGLFMDGL-----EVYRMMRVYGFVPAVSACNALLD 55
+CE ++ + A L L CY+ KGL G E Y ++ G VP + L+
Sbjct: 509 ACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIH 568
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS---- 111
+ + A L M+ G+ PN T++ + + +S E V +L S + S
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628
Query: 112 -SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ +Y +VI S+ + AF L E+ L P YSS++ G + E + +
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEV-EKNGLVPDLHIYSSLISGLCKMADMEKAVGL 687
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ M ++ L P + + +I G A +F + + T ++
Sbjct: 688 LDEMAKEGLEPG--IVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGN 745
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP-EEVCGLLRDVVERGYIPC 289
K G + +A +Y + +RGI D+ Y + C + E+ L ++ RGY
Sbjct: 746 CKNGDITDAFDLYKDMLDRGI-APDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHV 804
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
++ S V C +G+ +E E+LL ++D+ ++ ++ +++ + ++ +A +
Sbjct: 805 SL-FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFA 863
Query: 350 KIEKLKGS 357
++++ K S
Sbjct: 864 ELQQKKAS 871
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 40/212 (18%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC--GLLRDVVERGYIPC 289
K G V+ A Q+ ++ + G+ P C GLL+D++
Sbjct: 187 KNGSVRTAAQVVLMMGDLGLA------------------PTRRCCNGLLKDLLRAD---- 224
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
AMEL WK L + G+ D + S+ +E +C R D A +
Sbjct: 225 AMELV-----------WK----LKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFE 269
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK 408
++ + +++ TY+V++ GL + G +EEA + M + + + ++ +++ LC
Sbjct: 270 EMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGG 329
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
L++A DEM G KP+ Y ++ GFM
Sbjct: 330 RLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 177/423 (41%), Gaps = 50/423 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L+++ M P V L+ AL A L+ M G PN T+
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 86 SLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
+++ LC+ K + +L + G+ SV+ YN +ID Y K+G AF+ L+ M
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM-E 396
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ P TY+ ++ G + K + ++ M+E+KL P
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI---------------- 440
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
TY + ++ K ++ A ++ L++E G+ Y
Sbjct: 441 TYNS---------------------LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
F++ LCKE + EE L V +G + + + C GK LL +L+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L +S+ + L+E C +++ +A +L K+ + V TY +L+ + KDG + A+
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 381 RIFDYMKEL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++F++M L V + ++F+ L+E+ + +E G PD TY +I
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE---EGILPDLVTYTVLI 656
Query: 437 SGF 439
G+
Sbjct: 657 DGY 659
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 51/419 (12%)
Query: 32 LEVYRMMRVYG---FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
LEV+R M G F P + N +L +L + I +Y ++ + +SPN +T++ +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200
Query: 89 AQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
C+ G ++++ +Y+S + L P
Sbjct: 201 VNGYCKIG------NVVEAELYASKIVQ-------------------------AGLHPDT 229
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ G R + + + + +M +K N +I L + G+ A +F
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTN--LIHGLCEAGRINEALKLF 287
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
++ T ++ ALS GR EA+ +++ + E+G Y ++ LCKE
Sbjct: 288 ADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE 347
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
++ +E +L ++ E+G IP + + + C +G + E+L L++S C
Sbjct: 348 NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD-------LMESNSC 400
Query: 329 SSLMEYY-------CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
Y C R++ KA+AL K+ + K S + TY+ L+ G K +E A R
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M E +V ++ + + LC + +A D + G K +E Y +I G+
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 161/366 (43%), Gaps = 36/366 (9%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
AL+D + +I +A L M+ D PN +T++++ + LC+ K + +V +L
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G+ +V+ Y ++I K G F A N M + P TY++ L E
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS-LGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D ++ M E+ +LP L +I + +G T+ A K D +
Sbjct: 632 EVDDVIAKMNEEGILPD--LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 226 MLKALSKEGRVKE------------------AIQIYHLISERGITVRDSDYYAFVNVLCK 267
++K LS E R+KE A++++ + E G T+ S Y A + C+
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 749
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL--LDS 325
+ + EE GL+ + ERG P + + C G + E L+ A+++ GLL L+S
Sbjct: 750 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 809
Query: 326 F---CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ C +E SN +KA A+ + + D + VL+DGL K ++E +
Sbjct: 810 YKLLVCGLYIE--GSN---EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSEL 864
Query: 383 FDYMKE 388
D M+E
Sbjct: 865 IDIMEE 870
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 183/449 (40%), Gaps = 43/449 (9%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S G ++ L ++ M+ G P V L+D L ++N++ A + M G+ P+
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 83 FTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
T++ + C+ G + +LD S ++ YN +I KK A LN+
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M R L+P TY+S++ G + E + R++ LM E L+P + I L
Sbjct: 430 MLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS--VFIDTLCK 486
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A +F + ++ + ++ K G++ A + +
Sbjct: 487 EGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYT 546
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + LCKE + +E L+ ++ G P + + + G + ++ + ++
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G D ++ + Y S +++ + K+ + D+ TY VL+DG R+
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY---ARLG 663
Query: 378 EAVRIFDYMK---------ELKVVSSSSFVIVVSRLCH---LKELRK------------- 412
R FD++K L +VS I++ L H +KE R
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSLYIVS-----ILIKNLSHENRMKETRSEIGIDSVSNTLEY 718
Query: 413 --AMKNHDEMLKMGHKPDEATYKQVISGF 439
A+K ++M++ G D + Y +I+GF
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGF 747
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 182/424 (42%), Gaps = 35/424 (8%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ N+L+ + N++ A L M +G+ P+++T+S+ LC+ G+ E L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 105 LDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
DS G+ ++ V+Y +ID Y K G A+ L M N L P TY+ +++G
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNVLIEGLC 555
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ +K + + +V M+ + P ++ + + L D +A + +F + Q
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPT-VVTYTILIGEMLKDGAFDHALK-VFNHMVS--LGYQ 611
Query: 220 DDTCG--CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D C L A +G ++E + ++E GI Y ++ +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVE------------------ELLSAVLDK 319
L+ +V+ G P +S + + + + KE +L +++
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G +D +L+ +C ++++A L H+K + S D+ Y+ LLD K G
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI--YNSLLDCCCKLGVYA 789
Query: 378 EAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EAVR+ D M E ++ S+ ++V L KA +L G+ DE +K +I
Sbjct: 790 EAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849
Query: 437 SGFM 440
G +
Sbjct: 850 DGLL 853
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 169/379 (44%), Gaps = 14/379 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+D Y G ++ M +G N+LLDA R+ + + + M
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 76 DGVSPNKFTWSLVAQILCRS---GKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGA 130
+G+ P T++++ L + K E V + S S Y+ VI+ Y + G+
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG--- 187
A + +E C G + P TY ++++G + + E ++ +V M + + +
Sbjct: 267 ASEVFDE-CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMI 325
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ Y + + D K +MI ++ IEL T + L + R+ EA + ++
Sbjct: 326 DGYCRKNMVD--KALEIKMIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E+G+ Y +++ C E E L R++ G P + + + KG +
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E E + KGL+ D + ++L+ +C N ++D A+ L ++++ ++ Y L+
Sbjct: 441 EAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 500
Query: 368 DGLFKDGRMEEAVRIFDYM 386
GL K+GR EEA +++D M
Sbjct: 501 SGLAKEGRSEEAFQLYDNM 519
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 170/389 (43%), Gaps = 49/389 (12%)
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGA 130
D V+P + S+V C+SG+ LLD G+ +++ YN ++D Y+++ D
Sbjct: 139 DSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDD-- 194
Query: 131 AFDRLNEMCN---GRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
DR+ EM + P TY+ ++DG AR K E V +++ K+
Sbjct: 195 --DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA--------VFEEMKSKN- 243
Query: 185 LSGNDY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
LSG+ Y VI G A +F IE + T G ++ K G+++ A
Sbjct: 244 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPE---------EVCGLLRDVVERGYIPCAM 291
+ + RG+ + + ++ C+++ + E G+ DV + C +
Sbjct: 304 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 363
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + E + LL +++KG+ + ++L+ +C+ + +A L ++
Sbjct: 364 RRAN---------RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKEL 410
+ TY+V++DG K G + EA R M++ +V S+ +V C ++
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKV 474
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A++ +EM + G KP+ Y +ISG
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGL 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD------------------- 257
E DD MLK + EG ++ + Y ++ + RD
Sbjct: 191 EKDDDRVAEMLKVMENEG-IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249
Query: 258 -YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + +N C+ + + V G P + C G+ + E L++ +
Sbjct: 250 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 309
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+G+ ++ +++++ YC +DKA+ + + +EK+ LDV TY+ L GL + RM
Sbjct: 310 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+EA + M E V + S+ ++S C+ ++ +A + EM G +P TY +
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429
Query: 436 ISGFM 440
+ G++
Sbjct: 430 MDGYI 434
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 47/258 (18%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D Y K + LE+ +M G V N L L R N + A L M+
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 75 RDGVSPNKFTWSLVAQILCRSGK-------FEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
GV PN +++ + I C G F + G + S V YN+++D Y KKG
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG--NGAEPSLVTYNVMMDGYIKKGS 438
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A +R + + L P +Y++++ G K +V+ R+ M ++ P
Sbjct: 439 IREA-ERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV--- 494
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
Y A ++ L+KEGR +EA Q+Y +
Sbjct: 495 -------------AYTA---------------------LISGLAKEGRSEEAFQLYDNML 520
Query: 248 ERGITVRDSDYYAFVNVL 265
G+T D+ Y A V L
Sbjct: 521 GDGLTPDDALYSALVGSL 538
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
P+ V L VV GY C G+ +LL + G+ +++ C +S
Sbjct: 138 PDSVTPLSASVVVDGY--------------CKSGRVAHARQLLDEMPRHGVKVNALCYNS 183
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L++ Y + D+ +A +K+ + +G V TY +L+DGL + + +F+ MK
Sbjct: 184 LLDAYTREKDDDR-VAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK 242
Query: 390 KVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F V++ C +R+A + DE + G +P+E TY +I+GF
Sbjct: 243 NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF 293
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 180/426 (42%), Gaps = 46/426 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+LV+ GL D ++++R M V P V L+D L + + I A L M
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
DG P+ T++++ LC+ G V L+D+ + V YN +I KG
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+ M + + P TY +I++G + + R++ LM E+ H N
Sbjct: 291 EKAISLLDRMVSSK-CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY---HV---N 343
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+YV Y+A ++ L KEG+ +EA+Q++ ++
Sbjct: 344 EYV----------YSA---------------------LISGLFKEGKSQEAMQLFKEMTV 372
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + Y A ++ LC++ +P+E +L ++ P A S + G +
Sbjct: 373 KECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHK 432
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+ + + C S L+ C + ++ +A+ + ++ DV Y +++
Sbjct: 433 AIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMIN 492
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFV---IVVSRLCHLKELRKAMKNHDEMLKMGH 425
GL G +E+A+++++ M + S V I+++ LC + +A+ + ML G
Sbjct: 493 GLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGC 552
Query: 426 KPDEAT 431
PD T
Sbjct: 553 DPDLVT 558
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 186/436 (42%), Gaps = 55/436 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
VL+ +GLF LE Y + + P V N ++ + + + A ++ M
Sbjct: 137 VLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMP 196
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFG 129
P+ +T+ + LC++ + + + LLD G + S V +N++I+ KKGD
Sbjct: 197 VSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLA 256
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
++ M + P TY++++ G K E + ++ MV K +P
Sbjct: 257 RVAKLVDNMF-LKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVV----- 310
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
T G ++ L K+GR + ++ L+ ER
Sbjct: 311 --------------------------------TYGTIINGLVKQGRALDGARVLALMEER 338
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G V + Y A ++ L KE + +E L +++ + + S + C GK E
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E+LS + + +++ SSLM+ + KAI + + K + + Y VL+ G
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458
Query: 370 LFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML--KM 423
L KDG+++EA+ ++ M + VV+ S +++ L + + A++ ++EML +
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGS---MINGLSNAGLVEDALQLYNEMLCQEP 515
Query: 424 GHKPDEATYKQVISGF 439
+PD TY +++
Sbjct: 516 DSQPDVVTYNILLNAL 531
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 41/220 (18%)
Query: 226 MLKALSKEGRVKEAIQIY-HLISERGITVRDS--DYYAFVNVLCKEHQPEEVCGLLRDVV 282
+L + +EG A++ Y H+I +G+ + + + + +CK GL+ D V
Sbjct: 137 VLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK-------VGLVDDAV 189
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
+ S+C D + +LM+ C +ID
Sbjct: 190 QM--------FRDMPVSKCQP--------------------DVYTYCTLMDGLCKADRID 221
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIV 400
+A++L +++ T++VL++GL K G + ++ D M LK + + ++ +
Sbjct: 222 EAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMF-LKGCAPNEVTYNTL 280
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ LC +L KA+ D M+ P+ TY +I+G +
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 320
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 174/411 (42%), Gaps = 22/411 (5%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G +D L+++ M G P V LL ++ +++ A L +M G P++ T
Sbjct: 224 RGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVT 283
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVM------YNLVIDFYSKKGDFGAAFDRLNEM 138
++ LC++G+ + + L++ ++ Y+ +ID G + F E+
Sbjct: 284 YNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEV 343
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+++P Y+ ++ G +T + M EK P F + +++ L D
Sbjct: 344 LEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCY--NTLLKALCDA 401
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G A + + L T M+ L KE V EA+Q++ + E G Y
Sbjct: 402 GDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTY 461
Query: 259 YAFVNVLCKEHQPEEVCGL-------------LRDVVERGYIPCAMELSRFVASQCGKGK 305
++ L + H+ EE L LR + + + L + V S C G+
Sbjct: 462 NVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQ 521
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ +LL ++D G++ D ++L+ C R +D A+ L +++ LD TY
Sbjct: 522 VLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGT 581
Query: 366 LLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
L+D L + R +A+ +F D + S + ++ LC +++L +A+
Sbjct: 582 LIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAIN 632
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G V A+ +Y+ + G + Y ++ LCK P + L +++ RG P
Sbjct: 190 GAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTH 249
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ ++S C G+ KE E LL ++ DKG D ++ + C ++D+AI ++E
Sbjct: 250 TILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIE---RLEA 306
Query: 354 LKGS----LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS----FVIVVSRLC 405
L+ + L + Y L+DGLF GR EE + YM+ L+ S + I++
Sbjct: 307 LRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQC--YMEVLEQADVSPDIVLYTIMIRGCA 364
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A DEM + G PD Y ++
Sbjct: 365 EAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKAL 398
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 150/366 (40%), Gaps = 33/366 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + M+ GF P N LL AL ++ A L MVR+ V + T++ +
Sbjct: 371 DAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMI 430
Query: 90 QILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ +V G+++ G + SVM YN++ID + A +M G N
Sbjct: 431 IGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNP 490
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
S + + GA + +E ++V M + G+ A
Sbjct: 491 ----SLFLRLTLGANQVRDSETLQKLVESMCQS---------------------GQVLKA 525
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + D + T +L L K + A++++ + +G + + Y ++
Sbjct: 526 YKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDS 585
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK--GLL 322
L + H+ + L +D++ G P + + S C K + L L + LL
Sbjct: 586 LLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLL 645
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
SS + + + +A+ IKI++ GS++ Y + L GL + GR+E+A++I
Sbjct: 646 AQDEVISSARKKF-EEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKI 704
Query: 383 FDYMKE 388
F ++E
Sbjct: 705 FHILEE 710
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 128/306 (41%), Gaps = 17/306 (5%)
Query: 144 LTPGFSTYSSIL----DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
L P + + +++ R +E E R+ G E P F+ N + ++ G
Sbjct: 135 LQPPTAAFEALIFAHASAGRHHEAVEAFSRMEG---EFGCRPTTFVY-NAVLRVLVASGG 190
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A ++ R T ++ L K G +A++++ + RGIT +
Sbjct: 191 AVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHT 250
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ +C Q +E LL + ++G P + + F++ C G+ E E L A+
Sbjct: 251 ILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHT 310
Query: 320 G---LLLDSFCCSSLMEYYCSNRQIDKAIALHIKI-EKLKGSLDVATYDVLLDGLFKDGR 375
G L L + C L++ + ++ ++++ E+ S D+ Y +++ G + GR
Sbjct: 311 GTFVLGLKGYSC--LIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGR 368
Query: 376 MEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+A FD MKE K + +F ++ LC +L A EM++ D TY
Sbjct: 369 TNDAFAFFDEMKE-KGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYT 427
Query: 434 QVISGF 439
+I G
Sbjct: 428 TMIIGL 433
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 147/367 (40%), Gaps = 80/367 (21%)
Query: 16 SLVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
++VLD +++ + + + ++V+ M G P+V N L+D LYR + + A
Sbjct: 418 NVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEA 477
Query: 67 SCLYGAMVRDGVSPNKF--------------TWSLVAQILCRSGK----FEVVLGLLDSG 108
L+ M G +P+ F T + + +C+SG+ ++++ G++DSG
Sbjct: 478 RMLFYKM-EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSG 536
Query: 109 IYSSVM-YNLVIDFYSKKGDFGAAFD----------RLNEMCNGRNL------------- 144
+ V+ YN +++ K + A L+E+ G +
Sbjct: 537 VVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDAL 596
Query: 145 -----------TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDYVI 192
TP Y+S++ R +K + + L + LP+ + L D VI
Sbjct: 597 TLFQDILHSGGTPSMPIYNSMMRSLCRMQKLS---QAINLWFDH--LPRKYNLLAQDEVI 651
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQD-----DTCG--CMLKALSKEGRVKEAIQIYHL 245
+ E A E I++ ++C L L + GR+++A++I+H+
Sbjct: 652 SS----ARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHI 707
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ E GI + + LC E ++ +++G+ +R + S C +
Sbjct: 708 LEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHR 767
Query: 306 WKEVEEL 312
K+ + L
Sbjct: 768 RKDAQAL 774
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 180/418 (43%), Gaps = 15/418 (3%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
++ +M++ G + A S CNALL AL R E + + L M + PN T+ ++ LC
Sbjct: 293 LHGLMKLGGVMEAAS-CNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLC 351
Query: 94 RSGK-------FEVVLGLLDSGIYSS---VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+ + FE + G +G + YN +ID K G + M +
Sbjct: 352 KFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPR 411
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TY+ ++DG + E + + M K +P + ++ N ++ + G+
Sbjct: 412 CMPNTVTYNCLIDGYCKASMIEAARELFDQM-NKDGVPPNVVTLNT-LVDGMCKHGRING 469
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A F + ++ T +++A +++A++++ + E G + YY ++
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLIS 529
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
L + + + +L + E G+ P + + + C K K E E+L + + G+
Sbjct: 530 GLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKP 589
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D ++L+ ++ A L K+ K V TY L+ +G ++EA++IF
Sbjct: 590 DGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIF 649
Query: 384 DYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M V ++ + I+++ LC ++ A+ D+M G KP+ T+ + G
Sbjct: 650 RDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL 707
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 146/342 (42%), Gaps = 24/342 (7%)
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGR-NLTPGFSTYSSILDGARRYEKTEVS---DRIV 171
N++ID +KG A L+EM + P +T + + +K + + IV
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 172 GLM---VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
GL+ E ++ P +I +L G+T A + ++ +C +L
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQ--LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV---ERG 285
AL + K + + E I + +N LCK + +E + + G
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373
Query: 286 YI--PCAMELSRFVASQCGKGKWKE----VEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ P + + + C G+ +E VE + S + ++ + L++ YC
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRS---QPRCMPNTVTYNCLIDGYCKAS 430
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSF 397
I+ A L ++ K +V T + L+DG+ K GR+ AV F+ M K LK ++ ++
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKG-NAVTY 489
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C++ + KAM+ DEML+ G PD Y +ISG
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 183/447 (40%), Gaps = 25/447 (5%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+A +L++ C+ + + VY + + + N L+D L+R+ + A L
Sbjct: 160 NAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIR--NILIDVLFRKGRVDDALHLLDE 217
Query: 73 MVRDGV--SPNKFTWSLVAQILCRSGKF------EVVLGLLDSGIYSSVMYNLV-----I 119
M++ PN T +V L + K E ++GL+ V N + I
Sbjct: 218 MLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLI 277
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ G A+D L+ + + S +++L R + + + ++ M E +
Sbjct: 278 SRLCRSGRTDRAWDVLHGLMKLGGVMEAASC-NALLTALGRAREFKRMNTLLAEMKEMDI 336
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK-----IELQDDTCGCMLKALSKEG 234
P G +I L + A +F++ + +E T ++ L K G
Sbjct: 337 QPNVVTFG--ILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVG 394
Query: 235 RVKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
R +E + + + + + ++ Y ++ CK E L + + G P + L
Sbjct: 395 RQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTL 454
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ V C G+ E + + KGL ++ ++L+ +C+ I+KA+ L ++ +
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRK 412
S D Y L+ GL + G+++ A + MKE SF ++++ C +L +
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A + EM G KPD TY +IS F
Sbjct: 575 AYEMLKEMENAGIKPDGVTYNTLISHF 601
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 189/417 (45%), Gaps = 34/417 (8%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY F P + N +L+ L N ++A ++ M+ G+SP +T+ +V + C
Sbjct: 155 MWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVN 214
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLTPG 147
+ + LL + +S++Y ++I S+ A L EM C P
Sbjct: 215 EVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCE-----PD 269
Query: 148 FSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
T++ ++ G R +E ++ DR M+ + + G Y++ L MGK
Sbjct: 270 VQTFNDVIHGLCKAGRIHEAAKLHDR----MLLRDFTADALIQG--YLMHGLCRMGKVDE 323
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF-- 261
A + + + L + ++ GR +EA + L I + D + F
Sbjct: 324 ARAMLSKIPNPNTVLYNT----LINGYVVSGRFEEAKDL--LYKNMVIAGFEPDAFTFNI 377
Query: 262 -VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK+ L ++V++G+ P + + + C +G ++E ++++++ KG
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L L++ + L+ C + +I A+ ++ ++ D+ T++ L+ GL K+ +MEEA+
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497
Query: 381 RIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ D + E + ++ ++ ++ L+ +++A K EM G D TY +I
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 144/334 (43%), Gaps = 33/334 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++D + +G F + +V M G N L+ AL + +I+
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A +YG M G P+ +T++ + LC++ K E LGL + V+ N V
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV------- 513
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
TY++++ R E + +D++VG M + P +
Sbjct: 514 ------------------------TYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNI 548
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ N +I+ L G T + ++ E+I ++C ++ + + G+V +A+Q
Sbjct: 549 TYNG-LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ +RG+T Y + +N LCK + +E L + +G P A+ + ++ C +G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ + +LL + G + + S L+ Y+ N
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYFVKNN 701
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 189/451 (41%), Gaps = 45/451 (9%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +++ M + G P V N ++ L + I A+ L+ M+ + + +
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312
Query: 90 QILCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
LCR GK + +L ++V+YN +I+ Y G F A D L + P
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
T++ ++DG + + + MV+K P + +I G A +
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPN--VITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ + L C++ AL K+G++++A+Q+Y +S +G + + + LCK
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ EE GL RD++ G I + + + + ++ ++L+ + +G LD+
Sbjct: 491 DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITY 550
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKG-------------------------------- 356
+ L++ C +K + L IE++ G
Sbjct: 551 NGLIKALCKTGATEKCLGL---IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 357 ------SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ D+ TY+ L++GL K GR +EA+ +F+ ++ + + ++ ++SR C+
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
A + + + G P+E T+ +I+ F+
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYFV 698
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 149/364 (40%), Gaps = 26/364 (7%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y+ M + GF P N ++D L ++ + A MV+ G PN T++++ C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 94 RSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G FE VV + G+ ++V YN +I K G A EM + + P
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM-SSKGCKPDI 477
Query: 149 STYSSILDGARRYEKTEVS---------DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
T++S++ G + +K E + + ++ V L FL +L
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR------LELIQQA 531
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
EM F R C L + T ++KAL K G ++ + + + I +
Sbjct: 532 DKLVGEMRF-RGC----PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN 586
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N C+ + + LRD+++RG P + + + C G+++E L + + K
Sbjct: 587 ILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ D+ ++L+ YC + A L K + T+ +L++ K+ E
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQ 706
Query: 380 VRIF 383
I
Sbjct: 707 FTIL 710
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 153/365 (41%), Gaps = 54/365 (14%)
Query: 85 WSLVAQILCRSGKFEVVLGLL----DSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
+ L+ L G+F+++ LL D G ++ ++ L++ +Y K G G A L +M
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P F +Y+ +L+ +V+ + M+ + + P
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISP------------------ 198
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
Y ++ K C + D C +L+ ++K G V +I IY ++
Sbjct: 199 TVYTFGVVMKAFC--MVNEVDSACS-LLRDMTKHGCVPNSI-IYQML------------- 241
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
++ L + ++ E LL ++ G P + + C G+ E +L +L +
Sbjct: 242 --IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLR 299
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
D+ LM C ++D+A A+ KI + + Y+ L++G GR EEA
Sbjct: 300 DFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEA 355
Query: 380 VRIFDYMKELKVVS-----SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
D + + V++ + +F I++ LC L A++ DEM+K G +P+ TY
Sbjct: 356 K---DLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTI 412
Query: 435 VISGF 439
+I GF
Sbjct: 413 LIDGF 417
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 182/426 (42%), Gaps = 41/426 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++CY H G + + G+ P L+ + + A + +
Sbjct: 47 TLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHV 106
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAA 131
V G ++ +++++ LC+ G+ + +L ++ VMY+ +ID K A
Sbjct: 107 VAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDA 166
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ +EM + + P T+S ++D + K + + ++ +M++K + P
Sbjct: 167 YRLYSEMI-AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV------- 218
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
TY A M D C +V +A+ I++++ + G+
Sbjct: 219 ---------TYGAIM-------------DGYCLV--------NQVNKALNIFNVMVQEGV 248
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y +N LCK+ + +E L +++ + P + + + C GK E
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLE 308
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L+ + G +D +SL+ C N +D+AI L +I+ +V TY L+DGL
Sbjct: 309 LVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLC 368
Query: 372 KDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
KDGR+E+A IF + + E ++ ++ ++++ LC +A+ M PD
Sbjct: 369 KDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAV 428
Query: 431 TYKQVI 436
+Y+ +I
Sbjct: 429 SYETII 434
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 28/321 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D D +Y M G P V + L+DAL + + + A L M++
Sbjct: 151 STIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMK 210
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGA 130
GV PN T+ + C + L + + G+ +V YN++I+ KK
Sbjct: 211 KGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDE 270
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS----------DRIVGLMVEKKLL 180
A + EM + + + P TY+ ++DG + K S + V ++ LL
Sbjct: 271 AMNLFKEM-HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLL 329
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
H L N ++ Q ++ + K D+ I+ T ++ L K+GR+++A
Sbjct: 330 --HALCKNHHLDQAIT----------LVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAY 377
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
I+ I G + Y +N LCK+ +E LL + + IP A+ + +
Sbjct: 378 VIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYAL 437
Query: 301 CGKGKWKEVEELLSAVLDKGL 321
KG+ + +LL A++ +GL
Sbjct: 438 SEKGETVKTNKLLCAMIVRGL 458
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 172/402 (42%), Gaps = 47/402 (11%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P + N +L +L + N A L+ + +G+ P+ T +++ C +G +
Sbjct: 7 TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66
Query: 104 LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----AR 159
+L + K G P T+++++ G +
Sbjct: 67 ILTKIL--------------KMG-----------------YEPNSITFTTLIKGMCLNGQ 95
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA-EMIFKRACDEKIEL 218
YE D +V + + L + L MG+T AA +M+ K + + +
Sbjct: 96 AYEALLFHDHVVAHGFKLDQVSYAIL------MNGLCKMGETRAAMQMLRKTWVNADVVM 149
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
++ +L K V +A ++Y + +GI + V+ LCK+ + ++ LL
Sbjct: 150 Y----STIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLL 205
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++++G P + + C + + + + ++ +G+ + +C + ++ C
Sbjct: 206 AMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKK 265
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSF 397
+++D+A+ L ++ K + DV TY++L+DGL K G++ ++ + D M+ + K V ++
Sbjct: 266 KRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITY 325
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC L +A+ E+ G +P+ TY +I G
Sbjct: 326 NSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 141/340 (41%), Gaps = 33/340 (9%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+M+R V + ++D+L + + A LY M+ G+ PN +T+S++ LC+
Sbjct: 136 QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKD 195
Query: 96 GKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
K + + LL M + + P TY +I+
Sbjct: 196 RKGKQAMNLL-------------------------------AMMMKKGVKPNVVTYGAIM 224
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
DG + + I +MV++ + P + + +I L + A +FK +K
Sbjct: 225 DGYCLVNQVNKALNIFNVMVQEGVEPNVWCY--NIIINGLCKKKRVDEAMNLFKEMHWKK 282
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
I T ++ L K G++ ++++ + G TV Y + ++ LCK H ++
Sbjct: 283 INPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAI 342
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L++++ ++G P + + C G+ ++ + +L +G + + + ++
Sbjct: 343 TLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
C D+A+AL ++E D +Y+ ++ L + G
Sbjct: 403 CKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGE 442
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 200/477 (41%), Gaps = 44/477 (9%)
Query: 6 EGRDSQ---SDALSLVL-DCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
E RDS SD L VL + GL +V+ + G P+ NA++DAL + N
Sbjct: 135 EIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSN 194
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YN 116
+ LA + M DG P++FT++++ +C+ G + + L+ G +V Y
Sbjct: 195 SLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYT 254
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR-YEKTEVSDRIVGLMV 175
++ID + G A +L EM R L P +T + + G R + + +VG M
Sbjct: 255 ILIDGFLIAGRVDEALKQL-EMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFME 313
Query: 176 EKKLLPK-------HFLSGNDYV------IQKLSDMG-----KTYAAEM----------- 206
+ L + + LS N ++K+ + G T+ A M
Sbjct: 314 KDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVE 373
Query: 207 ---IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
IF ++ + +++AL R E + + G+ Y A ++
Sbjct: 374 TCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVID 433
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK + E L ++ +RG P + + F++ +G K+V +L +L G
Sbjct: 434 CLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKP 493
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
D S ++ C ++I A ++ + + TY++L+ G + +V++F
Sbjct: 494 DVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLF 553
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MKE + ++ + C +++++KA + ML++G KPD TY +I
Sbjct: 554 AKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKAL 610
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 161/418 (38%), Gaps = 22/418 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR-QNEIR 64
EG ++++D + G + L+ MMRV P + + ++R +
Sbjct: 244 EGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCK 303
Query: 65 LASCLYGAMVRDG----VSPNKFTWSLVAQILCR-SGKFEVVLG----LLDSGIYSSVMY 115
L G M +D V + + L + + +G+F +G + DS +++ M
Sbjct: 304 AFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS 363
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
L+ KG R+ + R + PGF+ Y ++ ++ DR + M
Sbjct: 364 CLL------KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
LL + + VI L + A M D I T L S G
Sbjct: 418 VDGLLSSVY--SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
VK+ + + G + +N LC+ + ++ ++++E G P + +
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ S C G +L + + + GL D + ++ ++ +C R++ KA L + ++
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKA 413
D TY L+ L + GR EA +F ++ V S RL +LRK+
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS----YTKRLVEELDLRKS 649
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 158/392 (40%), Gaps = 43/392 (10%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS + ++H F + + + M+ YGF+P V +CNA + +L Q + +A
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYS 123
Y M R +SPN +T ++V CRSGK + + LL G ++ V YN +I +
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+KG +A +L M L P T+++++ G R K + + ++ G M + P
Sbjct: 285 EKGLLSSAL-KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
T ++ S++G + A + Y
Sbjct: 344 V-------------------------------------TYNTLINGYSQQGDHEMAFRFY 366
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ GI Y A + LCK+ + + ++++ + +P + S + QC +
Sbjct: 367 EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 426
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
EL +++ G + + L+ +C N D A + ++ + LD T
Sbjct: 427 KNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 486
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ +GL G+ + ++ M+ K + S
Sbjct: 487 HQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 118/283 (41%), Gaps = 43/283 (15%)
Query: 200 KTYAAEMIFKRACDEKIELQD-------DTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
KT+A F+ A D ++++D ++C + +L +GRV A++ Y + I+
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
++ C+ + ++ LL+D+ G+ + + +A C KG +L
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL 295
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ + GL + ++L+ +C ++ +A + +++ + + + TY+ L++G +
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Query: 373 DGRMEEAVRIFDYM------------------------------------KELKVVSSSS 396
G E A R ++ M KE V +SS+
Sbjct: 356 QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F ++ C K + + + M++ G P+E T+ ++S F
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 170/401 (42%), Gaps = 9/401 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G+ P + + +I A + ++ G ++ ++ + LC+ G+ +
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 102 LGLL---DSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L LL D + VMYN +ID K AFD +E + R + P TY++++
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR-IFPDVFTYNALIS 376
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G K + + + M K ++P + ++ G A+ + + I
Sbjct: 377 GFCIVGKLKDAIDLFNKMTSKNIIPDVYTFS--ILVDGFCKDGNIKEAKNVLAMMMKQSI 434
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T ++ V +A I++ +S RG+T Y +N CK +E
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMK 494
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +++ + P + S + C G+ EL+ + +G D +S+++ C
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSS 395
+DKAI L K++ D+ TY +L+ GL + G++E+A ++F D + + +
Sbjct: 555 KKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVY 614
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ +++ C +A+ +M + G PD TY+ +I
Sbjct: 615 AYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 155/347 (44%), Gaps = 8/347 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D + + + A LY V + P+ FT++ + C GK + + L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390
Query: 105 LDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ +++ +++++D + K G+ A + L M +++ P TYSS++DG
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK-QSIKPDVVTYSSLMDGYC 449
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++ I M + + + + +I + A +FK ++I
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTAN--VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPD 507
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K GR+ A+++ + RG Y + ++ LCK+H ++ LL
Sbjct: 508 VITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLT 567
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ +G P + V C GK ++ ++ +L KG LD + + +++ +C
Sbjct: 568 KLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKG 627
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
D+A+AL K+E+ D TY++++ LF+ + A ++ M
Sbjct: 628 LFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 157/373 (42%), Gaps = 9/373 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGD 127
++++G P+ T + + C G+ L D I V Y +I+ K G+
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
AA + L +G+ + P Y++I+DG + + + + V K++ P F
Sbjct: 314 TKAALELLRRN-DGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY- 371
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I +GK A +F + + I T ++ K+G +KEA + ++
Sbjct: 372 -NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMM 430
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
++ I Y + ++ C ++ + + + RG + + C
Sbjct: 431 KQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVD 490
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +L + K + D SSL++ C + +I A+ L ++ D+ TY+ +L
Sbjct: 491 EAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSIL 550
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
D L K +++A+ + +K + +++ I+V LC +L A K +++L G+
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Query: 427 PDEATYKQVISGF 439
D Y +I GF
Sbjct: 611 LDVYAYTVMIQGF 623
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 149/346 (43%), Gaps = 13/346 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D ++++ M +P V + L+D + I+ A + M++ + P+ T+
Sbjct: 382 GKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTY 441
Query: 86 SLVAQILC---RSGKFEVVLGLLDS-GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
S + C K E + + G+ ++V YN++I+ + K A EM +
Sbjct: 442 SSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM-H 500
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ + P TYSS++DG + + + +V M + P + + ++ L
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD--IITYNSILDALCKKHH 558
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A + + + I +T ++K L + G++++A +++ + +G + Y
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ C + +E LL + E G IP A + S K + E+LL ++ +G
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
Query: 321 LLL---DSFCCSSLM-EYYCSNRQIDKA-IALHIKIEKLKGSLDVA 361
LL+ D S L+ +C+ + I+L +++ +LK D++
Sbjct: 679 LLVALTDDLVASILVRRTWCARLALWVTFISLLLRVIELKPGFDIS 724
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 171/409 (41%), Gaps = 55/409 (13%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
+P V N L+D R + + L+G ++ G+ + +++ + LC + + + +
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175
Query: 104 LL-----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTY 151
+L D+ YS+V+ +L D S++ A D L+ M +P +Y
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQR-----ALDLLHTMVKKSGGCSPNVVSY 230
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++ G R + + + M+++ ++P ++ + Y I L AE++ ++
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGVVPD-VVTYSSY-IDALCKARAMDKAELVLRQM 288
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
E T CM+ S G+ KE
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKE--------------------------------- 315
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
G+ R++ RG +P + +++S C GK KE E ++ KG D S L
Sbjct: 316 --TAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVL 373
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ Y + + + L +E D + Y++L+D K G M+EA+ IF M+E V
Sbjct: 374 LHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGV 433
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ V++ + L AM ++M+ MG KPD Y +I GF
Sbjct: 434 MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGF 482
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 186/457 (40%), Gaps = 45/457 (9%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + ++R M G +P + CN+ + +L + + + A+ + +M G P+
Sbjct: 307 YSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPD 366
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
T+S++ G +L L +S GI + +YN++ID Y K+G A
Sbjct: 367 LVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFT 426
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M R + P TY +++ R + + M+ L P + + +IQ
Sbjct: 427 QM-QERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVY--NSLIQGFC 483
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDT-CGCMLKALSKEGRVKEAIQIYHL---ISER--- 249
G A+ + I + ++ +L KEGRV EA I+ L I ER
Sbjct: 484 MHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDV 543
Query: 250 -----------------------------GITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
GI Y A ++ C+ + ++ L R+
Sbjct: 544 ITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFRE 603
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++ +G P + + G+ +++ +++ G +D C ++ C N
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVI 399
D+AIAL K+ + ++A + ++D ++K + EEA +FD + +V ++S++ +
Sbjct: 664 DDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGV 723
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ L + +A M K G P +I
Sbjct: 724 MITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNII 760
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 167/413 (40%), Gaps = 26/413 (6%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS---GKF 98
G P V + N ++ +R+ E+ A L+ M++ GV P+ T+S LC++ K
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281
Query: 99 EVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E+VL + S + V YN +I YS G + EM R L P T +S +
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR-RGLMPDIFTCNSYMS 340
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPK--------HFLSGNDYVIQKLSDMGKTYAAEMIF 208
++ K++ + M K P H + YV+ L+ +F
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN----------LF 390
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
I ++ A K G + EA+ I+ + ERG+ Y + +
Sbjct: 391 NSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRM 450
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL-LDSFC 327
+ + ++ G P + + + C G + +EL+S ++ +G+ ++
Sbjct: 451 GRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVF 510
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+S++ C ++ +A + + + DV T++ L+DG G+ME+A + D M
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570
Query: 388 ELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ C + + EML G KP TY ++ G
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGL 623
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 153/382 (40%), Gaps = 17/382 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V+ +S G D ++ + M G P N+L+ + A L M+ G
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502
Query: 78 VS-PNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAA 131
+ PN ++ + LC+ G+ + D I+ + +N +ID Y G A
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
F L+ M + + P TYS++LDG R + + + M+ K + P G +
Sbjct: 563 FGVLDAMIS-VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYG--II 619
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIE----LQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ L + G+T A K+ C E IE + TCG +L L + EAI ++ +
Sbjct: 620 LHGLFNDGRTVGA----KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLG 675
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ + ++ + K + EE L + G +P A + + +G +
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVE 735
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E + + S + G S ++++ +I KA K++ SL+ +T ++L
Sbjct: 736 EADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLML 795
Query: 368 DGLFKDGRMEEAVRIFDYMKEL 389
+ G+ E ++ M +
Sbjct: 796 SLFSRKGKYREQIKSLPAMYQF 817
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 178/447 (39%), Gaps = 45/447 (10%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
M++ G + + V+ + +G ++ M G VP V ++ +DAL +
Sbjct: 216 MVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKA 275
Query: 61 NEIRLASCLYGAMVRDGVSPNKFT-------WSLVAQI---------------------- 91
+ A + M+ +G P+K T +S++ Q
Sbjct: 276 RAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTC 335
Query: 92 ------LCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
LC+ GK + DS V Y++++ Y+ +G + N M
Sbjct: 336 NSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM-E 394
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
G + S Y+ ++D + + + I M E+ ++P + G VI S MG+
Sbjct: 395 GNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGT--VIAAFSRMGR 452
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY- 259
A F + ++ +++ G + +A ++ + RGI ++ ++
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ +N LCKE + E + V+ G P + + + GK ++ +L A++
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV 572
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ D S+L++ YC N +ID + L ++ TY ++L GLF DGR A
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632
Query: 380 VRIFDYMKEL-KVVSSSSFVIVVSRLC 405
++ M E + S+ I++ LC
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLC 659
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 14/234 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +LD Y G DGL ++R M G P +L L+ A + M+
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVI------DFYS--KKGD 127
G + + T ++ LCR+ + + L +V +N+ I Y K+ +
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
FD + + L P STY ++ + E +D + LM + P L
Sbjct: 702 ANELFDSI----SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLN 757
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
N +I+ L + G+ A + + I L+ T ML S++G+ +E I+
Sbjct: 758 N--IIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIK 809
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 176/417 (42%), Gaps = 15/417 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+ R++ F P N L+ AL + + A ++ M+ G SP+ T+S++
Sbjct: 148 DARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDAT 207
Query: 93 CRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++ + + LLD G V YN++I+ +GD A + L+++ P
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDL-PSHGCKPD 266
Query: 148 FSTYSSILD---GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TY+ +L G+ R+++ E + M K P + ++ L G A
Sbjct: 267 AVTYTPVLKSLCGSERWKEVE---ELFAEMASNKCAPDEVTF--NTIVTSLCQQGLVDRA 321
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + T +L L GRV +A+++ + G Y +
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC Q E L+ ++V P + + +AS C KG +++ + + G D
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF- 383
+S+++ C+ R ID A+ L ++ D+ T++ LL GL R E+A ++
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMV 501
Query: 384 DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ M +++F V++ LC L +A++ M + G P+++TY V+ +
Sbjct: 502 NMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALL 558
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 189/431 (43%), Gaps = 13/431 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++LD + + + MR G P + N L++A+ + ++ A + +
Sbjct: 201 SILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ T++ V + LC S +++ V L + V +N ++ ++G
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A ++ M + P TYSSILDG + V D + L K K
Sbjct: 321 AIKVVDHM-SEHGCIPDIVTYSSILDGL--CDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377
Query: 191 VIQKLSDMGK-TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V++ L + + +A E++ + C + + T ++ +L ++G V AI++ +SE
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSD-CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN 436
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + ++ LC E ++ LL ++ G P + + + C +W++
Sbjct: 437 GCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDA 496
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLD 368
E+L+ ++ D+ ++++ C + +AI +KI G + + +TY++++D
Sbjct: 497 EQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE-TLKIMAENGCIPNQSTYNIVVD 555
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K G+ +EA+++ M ++ V+S + ++ +A+ M+ G PD
Sbjct: 556 ALLKAGKTQEALKLLSGMTN-GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPD 614
Query: 429 EATYKQVISGF 439
TY+ + G
Sbjct: 615 TITYRSLAYGI 625
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 157/388 (40%), Gaps = 16/388 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +LD G D +E+ ++ YG P A +L L + A L MV
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
P++ T++ V LC+ G +VV + ++G V YN +ID +
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L+ + P T++++L G ++ E +++++ M+ P + +
Sbjct: 461 AMELLSNL-QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA--TTFNT 517
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI L G A K + T ++ AL K G+ +EA+++ G
Sbjct: 518 VITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS-----G 572
Query: 251 ITVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+T D Y ++ + K + EE LLR +V G P + C +
Sbjct: 573 MTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+L + D GL D+ + ++ +C N + D AI + D +TY +LL
Sbjct: 633 RAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILL 692
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ L + ++EA ++ + L V+ S
Sbjct: 693 EALAYECLLDEAKQLLVNLCSLGVLDKS 720
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
LR +++R I A+ L +AS G GK L L C+ L++ CS
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKC--------------LPLPVVPCNILIKRLCS 110
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
++ A + L S V TY+ +++G + GR+E+A R+ M + +F
Sbjct: 111 GGRVADAERV---FATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPP--DTFTF 165
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
++ LC + A+ D+ML G P TY
Sbjct: 166 NPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTY 200
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 176/413 (42%), Gaps = 19/413 (4%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
R++ G V A AL D R + A + G M V PN +T++ + LC
Sbjct: 124 RVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCER 180
Query: 96 GKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G+ L +LD + V YN++++ K + A + ++ M TP T
Sbjct: 181 GQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM-RAEGCTPNNVT 239
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN----DYVIQKLSDMGKTYAAEM 206
Y+ ++DG + +V D + L + LP H + + V++ L + A+
Sbjct: 240 YNVLMDGM--CGEGDVDDALELL----RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADE 293
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ E + T ++ +L ++G +++AIQ+ +S+ G T Y A +N LC
Sbjct: 294 LVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLC 353
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
++ + GLL + G P + + + C +W + EEL+ + G L D+
Sbjct: 354 EQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNV 413
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
++L+ + C + AI + ++ + + TY ++ GL K ++++A+ +F+ M
Sbjct: 414 TFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 473
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ L + +A++ ++ G P Y ++ G
Sbjct: 474 GHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 159/372 (42%), Gaps = 18/372 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + ++++D +G D LE+ R + +G P+ N +L L
Sbjct: 231 EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 290
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID 120
A L M+R+ PN+ T+++V LCR G + + LL+ G ++ V YN +I+
Sbjct: 291 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 350
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
++ + A L++M P TY+++L G + ++ ++ M + L
Sbjct: 351 GLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL 409
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + +I L G A +FK+ D+ T ++ L+K ++ +A+
Sbjct: 410 PDNVTF--NTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 467
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++++ + +G D Y L + EE +R + + G P + + +
Sbjct: 468 ELFNEMGHKGFNP-DKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C GK + ++++ ++ G + D L+E +++A L IK+
Sbjct: 527 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL--------- 577
Query: 361 ATYDVLLDGLFK 372
+ DVL++ L K
Sbjct: 578 CSRDVLVNSLIK 589
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 190/435 (43%), Gaps = 18/435 (4%)
Query: 17 LVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
VL+ YS+ GL + LEVYR M G P++ +AL+ A ++ I+
Sbjct: 190 FVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVM 249
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFY 122
L M G+ PN +T+++ ++L R GK + ++ + D G V+ Y ++ID
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDAL 309
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
A +M + + P TY ++LD + ++I M P
Sbjct: 310 CTARKLDDAMCLFTKMKSSSH-KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD 368
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ ++ L G+ A + + + T ++ L + R+ +A+ +
Sbjct: 369 --VVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + G+ Y ++ K P + + RG P + + + S
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAE 486
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ E + + + + GL DS + +M+ Y Q+D+AI L ++ K++ DV
Sbjct: 487 MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIV 546
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
+ L+D L+K GR+EEA ++F M+E+ + + ++ I+++ L +++KA++ + M
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606
Query: 422 KMGHKPDEATYKQVI 436
G P+ T+ ++
Sbjct: 607 GHGCSPNTITFNTLL 621
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 179/433 (41%), Gaps = 52/433 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD +S G +++ M G+ P V L++AL + I A L M + G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAF 132
V PN T++ + L R+ + + L L + G+ + Y L+ID++ K G G A
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ +M R + P ++ L
Sbjct: 460 ETFEKM-KARGIAPNIVACNASL------------------------------------- 481
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS----E 248
L++MG+ A+ +F + T M+K SK G+V EAI++ +S E
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ V +S ++ L K + EE + + E P + + +A +G+ ++
Sbjct: 542 PDVIVINS----LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L ++ G ++ ++L++ C N ++D A+ + K+ + DV T++ ++
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH 657
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK-NHDEMLKMGHKP 427
G K +++ A+ +F MK+L + ++ + ++ A + D ++G
Sbjct: 658 GFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNI 717
Query: 428 DEATYKQVISGFM 440
D + ++ V+ G +
Sbjct: 718 DRSFWEDVMGGIL 730
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/472 (20%), Positives = 193/472 (40%), Gaps = 45/472 (9%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S ++++ CYS G + +++ M P V N+L+D LY+ + A
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDF 121
++ M ++P T++++ L + G+ + + L +S +++ +N ++D
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL- 180
K + A +M N P T+++I+ G + + ++ + I KKLL
Sbjct: 624 LCKNDEVDLALKMFYKMTT-MNCRPDVLTFNTIIHGFIK--QNQIKNAIWLFHQMKKLLR 680
Query: 181 PKH-------------------FLSGNDYVIQKLSDMGKTYAAEM---IFKRACDEKIEL 218
P H F D+ Q S++ +++ ++ I A EK L
Sbjct: 681 PDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAIL 740
Query: 219 QDDTCGC------------MLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNVL 265
+ C ++K L K + A ++ E G+ Y ++
Sbjct: 741 FGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGF 800
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ H E L ++ G P + + + GK E+ +L +L +G ++
Sbjct: 801 LEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNT 860
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ ++ + ++DKA+ L+ + S T+ L+DGL K GR+++A +FD
Sbjct: 861 ITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDG 920
Query: 386 MKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M +S+ + I+V+ L + A + M+K G +PD +Y ++
Sbjct: 921 MVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILV 972
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 191/462 (41%), Gaps = 72/462 (15%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
L++D + G LE + M+ G P + ACNA L +L + A ++ +
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SGIYSS---VMYNLVIDFYSKKGDFGAA 131
G++P+ T++++ + + G+ + + LL S + ++ N +ID K G A
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Query: 132 ---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
F R+ EM NL P TY+ +L G + + + + ++ M H S N
Sbjct: 564 WQMFCRMEEM----NLAPTVVTYNILLAGLGKEGQIQKAVQLFESM------NGHGCSPN 613
Query: 189 DYVIQKLSD-MGKT----YAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQ 241
L D + K A +M +K + + D T ++ K+ ++K AI
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMTT---MNCRPDVLTFNTIIHGFIKQNQIKNAIW 670
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEV--CGLLRDVVERGYIPCAMELSR---- 295
++H + K +P+ V C LL V++ G I A ++
Sbjct: 671 LFHQMK-------------------KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFY 711
Query: 296 FVASQCGKGKWKEVEE--LLSAVLDKGLLL-----------DSFCCSSLMEYYCSNRQID 342
V S + W++V L A +K +L D +++ C +++
Sbjct: 712 QVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTS 771
Query: 343 KAIALHIKIEK---LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
A + +K K +K +L V Y++L+DG + +E A +F+ MK + ++
Sbjct: 772 VARNVFVKFTKELGVKPTLKV--YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYN 829
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ ++ + +DEML G KP+ TY VIS +
Sbjct: 830 SLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/451 (19%), Positives = 183/451 (40%), Gaps = 24/451 (5%)
Query: 1 MIQSCEGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+ +S G + ++ +LDC L+++ M P V N ++
Sbjct: 601 LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-----------LDS 107
+QN+I+ A L+ M + + P+ T + + +SG+ E + +D
Sbjct: 661 KQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDR 719
Query: 108 GIYSSVMYNLVIDFYSKKGD-FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
+ VM ++ + ++K FG +RL +C R + S I+ +++KT V
Sbjct: 720 SFWEDVMGGILTEAGTEKAILFG---ERL--VC--RAICKDDSVLIPIIKVLCKHKKTSV 772
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ R V + K+L K L + +I ++ A +F+ T +
Sbjct: 773 A-RNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSL 831
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ A K G++ E +Y + RG Y ++ L K ++ ++ L ++V +
Sbjct: 832 IDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + G+ + E+ ++ G +S + L+ Y +D A
Sbjct: 892 SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACE 951
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
++ K D+ +Y +L+D L GR+++A+ F+ +K+ + ++ ++++ L
Sbjct: 952 FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLG 1011
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +A+ EM G PD TY +I
Sbjct: 1012 RSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 10/260 (3%)
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACD-EKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
S +D V+ L + A FK + + +TC ML+ L RV++ ++
Sbjct: 89 SSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFD 148
Query: 245 LISERGITVRDSDYYAFV-NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
L+ +R I R+ D Y + L + L + E G++ A + +
Sbjct: 149 LM-QRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQS 207
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G KE E+ ++ +GL S+LM R I + L ++E + ++ TY
Sbjct: 208 GFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTY 267
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
+ + L +DG+++EA RI M + VV+ + +++ LC ++L AM +
Sbjct: 268 TICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVT---YTVLIDALCTARKLDDAMCLFTK 324
Query: 420 MLKMGHKPDEATYKQVISGF 439
M HKPD+ TY ++ F
Sbjct: 325 MKSSSHKPDKVTYVTLLDKF 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 11/225 (4%)
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
DT + K+L G +++A + E G + Y ++ L + +E + R
Sbjct: 160 DTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRR 219
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+V G P S + + + K V LL + GL + + + + + +
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS----- 395
ID+A + +++ DV TY VL+D L ++++A+ +F MK SSS
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK-----SSSHKPDK 334
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++V ++ + L K K EM G+ PD T+ +++
Sbjct: 335 VTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 143/358 (39%), Gaps = 16/358 (4%)
Query: 88 VAQILCRSGKFEVVLGLL-----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ ++LC+ K V + + G+ ++ +YNL+ID + + + A++ EM
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM-KS 818
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P TY+S++D + K + M+ + P + VI L +
Sbjct: 819 AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITY--NMVISNLVKSNRL 876
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A ++ T G ++ L K GR+ +A +++ + G + Y
Sbjct: 877 DKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL 936
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
VN K + C + +V+ G P + V C G+ + + GL
Sbjct: 937 VNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL 996
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
D + ++ +++ ++A++L +++ D+ TY+ L+ L G +EEA +
Sbjct: 997 DPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGK 1056
Query: 382 IFDYMKELKVVSSSSFVIVVSRLCHLKELRK----AMKNHDEMLKMGHKPDEATYKQV 435
I++ EL+ + V + L L A + +M+ G P+ T+ Q+
Sbjct: 1057 IYE---ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 190/448 (42%), Gaps = 21/448 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S L+++L+C + +G + + G+ P + N L+ L ++ I A
Sbjct: 99 GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----------SSVMY 115
+ L+ M + G +P+ T+ + + LC +G + L L + + + Y
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITY 218
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N+++D K G A EM + + P +Y+S++ G K E S R++ M+
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEML 277
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
++ L P + + +I L GK A+ + + I T +++ G
Sbjct: 278 DQGLQPD--MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 335
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ A +++ + +G Y +N K + EE L +++ G P +
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ GK + ++L S + G+ +S+ ++ C N + +A+ L +++
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELR 411
L++ + L+DGL K G++E A +F+ + E VV ++ I++ C ++
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV---TYTIMIHGFCREGQVD 512
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVISGF 439
KA +M G PD TY ++ GF
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGF 540
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 175/414 (42%), Gaps = 51/414 (12%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD---- 76
C H+ + ++ M+ G P V L+ L I +A L+ M+ D
Sbjct: 150 CMEHR--ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRY 207
Query: 77 --GVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFG 129
PN T++++ LC+ G+ + L + G+ S++ YN +I + G +
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWE 267
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ L+EM + + L P T++ ++D + K + +++G+M+E ++P L +
Sbjct: 268 ESKRLLDEMLD-QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD--LVTYN 324
Query: 190 YVIQKLSDMGKTYAAEMIF----KRACD--------------------EKIELQDD---- 221
+I+ +G +A +F + C+ E ++L ++
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384
Query: 222 -------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
T +LK + G+V +A +++ ++ GI Y F++ LCK E
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++ + L+ + C GK + EL + ++G + + ++
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+C Q+DKA L K+E + D+ TY+ L+ G ++ ++EE V++ M +
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 558
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 176/454 (38%), Gaps = 83/454 (18%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+Y MR+ G N LL+ L N +R + ++R G SPN T++ + +
Sbjct: 89 FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148
Query: 92 LCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGR---- 142
LC + + L + G V+ Y +I G+ A EM N
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208
Query: 143 -NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
N P TY+ I+DG + + + + ++ M + ++P +S N
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPS-IISYNS------------ 255
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
++ G+ +E+ ++ + ++G+ +
Sbjct: 256 ------------------------LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LCKE + E LL ++E G +P + + + C G EL ++ KG
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
D + L+ Y ++++A+ L+ ++ + +V TYD LL G+F G++++A +
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411
Query: 382 IFDYMKELKV-----------------------------VSSSSFVI-------VVSRLC 405
+F MK + + SS+F + ++ LC
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+L A + +++ GH+P+ TY +I GF
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGF 505
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 173/403 (42%), Gaps = 52/403 (12%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L + +M P++S+ N LL L + LY M G+S ++ T +++
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 91 ILCRSGK----FEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAA---FDRLNEMCNG 141
LC + F G+L G YS V YN +I + A F R+ ++
Sbjct: 113 CLCNVNRLREGFAAFAGILRRG-YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL--- 168
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
TP TY +++ G ++ ++ M L+D+ +
Sbjct: 169 -GCTPDVVTYGTLIKGLCGTGNINIALKLHQEM--------------------LNDISR- 206
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
++ C + T ++ L K GR EA Q++ + +G+ Y +
Sbjct: 207 ------YEINCKPNV----ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ C + EE LL +++++G P + + + + C +GK E ++LL +++ G+
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ D +SL+E +C ++ A L + + DV +Y+VL++G K ++EEA++
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376
Query: 382 IFDYM----KELKVVSSSSF---VIVVSRLCHLKELRKAMKNH 417
+++ M K V++ S + + ++ K+L MK H
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/356 (18%), Positives = 138/356 (38%), Gaps = 43/356 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++++D +G ++ ++ +M G VP + N+L++ ++
Sbjct: 279 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 338
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L+ +M G P+ + YN++I+ YSK
Sbjct: 339 ARELFVSMPSKGCEPD------------------------------VISYNVLINGYSKT 368
Query: 126 GDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A NEM G+ P TY S+L G K + + ++ +M H
Sbjct: 369 LKVEEAMKLYNEMLLVGKR--PNVITYDSLLKGIFLAGKVDDAKKLFSVM------KAHG 420
Query: 185 LSGNDYV----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
++ N Y + L + A +F +L+ + C++ L K G+++ A
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 480
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ +S G Y ++ C+E Q ++ L++ + G P + + +
Sbjct: 481 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 540
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
K +EV +LL + K + D+ CS +++ + + + + L + KG
Sbjct: 541 YESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKG 596
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 232 KEGRVK--EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K G V A+ +HL+ T S + ++ L K +V L + G
Sbjct: 44 KTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSD 103
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
L+ + C + +E + +L +G + ++L++ C +I +A L +
Sbjct: 104 RCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFL 163
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS---------SFVIV 400
+++KL + DV TY L+ GL G + A+++ M L +S ++ I+
Sbjct: 164 RMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM--LNDISRYEINCKPNVITYNII 221
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V LC + +A + +EM G P +Y +I GF
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 26 GLFMDGL----------EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
G+F+DGL +++ ++ F + N L+D L + ++ A L+ +
Sbjct: 429 GIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSN 488
Query: 76 DGVSPNKFTWSLVAQILCRSG---KFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGA 130
+G PN T++++ CR G K V++ +++ + + YN ++ + +
Sbjct: 489 EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEE 548
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
L+ M ++++P T S ++D + EK + ++ +K + KH L
Sbjct: 549 VVQLLHRMAQ-KDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLL 602
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 174/426 (40%), Gaps = 17/426 (3%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C+ H G ++ + G+ A N +L L + A + +V +G S
Sbjct: 81 CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLL----------DSGIY---SSVMYNLVIDFYSKKGD 127
N+ ++ ++ LC +G+ + LL G + + VMY++VID + G
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
F+ NEM G + P TY S++ G K +V M+ + L ++
Sbjct: 201 VDEGFEFYNEMM-GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVF- 258
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L G A +F + E TC ++ +G V A +++ I
Sbjct: 259 -TVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E G Y F++ CK + + + ++ G +P + + + C G+
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E++ + GL D C L++ C ++++D+AI L ++ + + DV +Y +L+
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
G RM EA+ + M +V ++ ++ LC + A + +EM G
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497
Query: 427 PDEATY 432
PD TY
Sbjct: 498 PDTITY 503
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 164/384 (42%), Gaps = 16/384 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+DC G +G E Y M G P +L+ L + L M+R
Sbjct: 189 SIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIR 248
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGA 130
G+ + + ++++ LC++G + D + N+V + Y KG+
Sbjct: 249 RGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDM 308
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD + E R++ TY+ + G + + + R+ M + ++P +
Sbjct: 309 ARELFDAIGEWGFKRDVW----TYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPN--IVT 362
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I L G+ A I K + TC +L L K R+ +AI +++ +
Sbjct: 363 YNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV 422
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
E G+T Y ++ C + E LLRD+ + +P + S + C G+
Sbjct: 423 ESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRIS 482
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
LL+ + KG L D+ S L++ + +D+A+ L ++ K DV Y +++
Sbjct: 483 NAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMI 542
Query: 368 DGLFKDGRMEEAVRIFD--YMKEL 389
DG K R++EA+ +F +MK L
Sbjct: 543 DGYCKSERIDEAINLFREMHMKNL 566
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 169/393 (43%), Gaps = 44/393 (11%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI--- 109
++D L R + Y M+ +GV PN+FT+ + + LC GKF GL+D I
Sbjct: 191 VIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRG 250
Query: 110 --YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
S ++ ++ID K G A + +EM N R P T ++++ G
Sbjct: 251 LDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVN-RGYEPNIVTCTALMGG---------- 299
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ L GN + ++L D E FKR T +
Sbjct: 300 ---------------YCLKGNVDMARELFDA----IGEWGFKRDVW--------TYNVFI 332
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
K GRV++A++++ + G+ Y + ++ LCK + +++ + G
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + C + + L + +++ GL D + + L+ C++R++ +A+ L
Sbjct: 393 PDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNL 452
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCH 406
+ + TY L+DGL + GR+ A R+ + M + + + ++ I++ L
Sbjct: 453 LRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWK 512
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L +A+ ++M+K G +PD Y +I G+
Sbjct: 513 KQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGY 545
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 106/257 (41%), Gaps = 9/257 (3%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ V++ L G A + L + + G ++ L + GRV EA+ + +I +
Sbjct: 111 NTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEK 170
Query: 249 RGITVRDSD--------YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+D Y ++ LC+ +E +++ G P +
Sbjct: 171 EKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGL 230
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
CG GK+ E L+ ++ +GL + + + L++ C N + +A + ++ ++
Sbjct: 231 CGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNI 290
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T L+ G G ++ A +FD + E ++ + + C + +R A++ DE
Sbjct: 291 VTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDE 350
Query: 420 MLKMGHKPDEATYKQVI 436
M + G P+ TY +I
Sbjct: 351 MCREGVVPNIVTYNSLI 367
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ +L +G LD+ +++++ C N + KA+ H +I SL+ +Y +L++GL
Sbjct: 94 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFV---------IVVSRLCHLKELRKAMKNHDEMLK 422
++GR+ EAV + +++ K F IV+ LC + + + ++EM+
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 213
Query: 423 MGHKPDEATYKQVISGF 439
G P+E TY +I G
Sbjct: 214 NGVCPNEFTYGSLIRGL 230
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 46/252 (18%)
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+G + IF + L +LK L G V +A++ + I G ++ +
Sbjct: 85 LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVER------GYI--PCAMELSRFVASQCGKGKWKEV 309
Y +N LC+ + E LLR + + G+ + S + C G E
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY--DVLL 367
E + ++ G+ + F SL+ C + + L E ++ LDV+ Y VL+
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGL--VDEMIRRGLDVSVYVFTVLI 262
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
DGL K+G + EA +F DEM+ G++P
Sbjct: 263 DGLCKNGMLVEAREMF----------------------------------DEMVNRGYEP 288
Query: 428 DEATYKQVISGF 439
+ T ++ G+
Sbjct: 289 NIVTCTALMGGY 300
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/477 (20%), Positives = 191/477 (40%), Gaps = 83/477 (17%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN----------- 81
V+ M G P+++ NA++ + +R+AS L G M G+ PN
Sbjct: 205 NVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGH 264
Query: 82 -KFTWS-----------------------LVAQILCRSGKFEVVLGLLDS----GIYS-S 112
F WS ++ +LC G+ L D GI + +
Sbjct: 265 CVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANT 324
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
+ +N++ID Y+K G A EM R L P T++ I GA ++
Sbjct: 325 ITFNVLIDGYAKTGRMDQACAAYREM-KARGLVPDSCTFNIIAAGAYKFGHA------AQ 377
Query: 173 LMVEKKLLPKHFLS-GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
L+ + + H L+ G D ++ +L + A + + A ++ L ++ A S
Sbjct: 378 LVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYS 437
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI---- 287
KEG +EA ++Y ++++ G+ S + + LC + + +E LL +V +GY
Sbjct: 438 KEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTS 497
Query: 288 ------------------------------PCAMELSRFVASQCGKGKWKEVEELLSAVL 317
P + S ++ C E + + +
Sbjct: 498 FTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMT 557
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+G++ ++F +S++ C + +A+ L + + D+ T ++L+DGL ++G++E
Sbjct: 558 ARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLE 617
Query: 378 EAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+ D + ++ +++ C K++ AM ++ML G +PD TY
Sbjct: 618 MVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYN 674
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 190/454 (41%), Gaps = 44/454 (9%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR---QNEI 63
G + + ++++D Y+ G YR M+ G VP N + Y+ ++
Sbjct: 319 GIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQL 378
Query: 64 RLASCLYGA-MVRDGVS--PNKFTWSLVAQILCR-SGKFEVVLGLLDSGIYSSVM-YNLV 118
++G+ M+ DG+ + W CR +E++ G ++ G SV +N +
Sbjct: 379 VHDHDMFGSHMLADGMDMLVCRLCWD------CRLDDAWELLRGAIEQGAPLSVTGFNAL 432
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I YSK+G AF+ L + N L P ST++ ++ G + + + ++ MV K
Sbjct: 433 IAAYSKEGLHEEAFE-LYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491
Query: 179 L---------LPKHFLSGNDYVIQK-LSDMGKTYAAEMIFKRACDEKIELQDD--TCGCM 226
L F GN K DMGK + LQ D
Sbjct: 492 YCLSTSFTICLDASFREGNAVCALKCWDDMGK---------------LGLQPDFIAFSAY 536
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ L + V EA Q + ++ RGI + Y + ++ LC+ E L +++ + G
Sbjct: 537 INGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGL 596
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + + C +GK + V+ LL + GL D+ ++++ YC + ++ A+
Sbjct: 597 VPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMN 656
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
K+ D+ TY++ + L + + +A ++ D + + S ++ ++ +C
Sbjct: 657 FMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGIC 716
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +AM ++KM +P+ T +S F
Sbjct: 717 S-DVLDRAMILTGRLIKMAFQPNTITLNVFLSHF 749
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 133/368 (36%), Gaps = 69/368 (18%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++ YS +GL + E+YR+M G P+ S N L+ L Q +
Sbjct: 420 QGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDE 479
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L MV G C S F + L D ++
Sbjct: 480 AQLLLEHMVSKGY--------------CLSTSFTICL-----------------DASFRE 508
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
G+ A ++M L P F +S+ ++G R + + + M + ++P +F
Sbjct: 509 GNAVCALKCWDDM-GKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNF- 566
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
T ++ AL + G + EA+++
Sbjct: 567 ------------------------------------TYNSIISALCRAGNMTEALKLQQN 590
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + G+ ++ LC+E + E V LL D+ G P + + + + C
Sbjct: 591 MRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKD 650
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
++ +L G D F + M CSN +++A + ++ + D TY+
Sbjct: 651 MNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNT 710
Query: 366 LLDGLFKD 373
L+DG+ D
Sbjct: 711 LMDGICSD 718
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 182/421 (43%), Gaps = 16/421 (3%)
Query: 30 DGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ LE+ MM +V+ P V + + +++ + + ++ L+ M+ G+ P+ T++
Sbjct: 183 EALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYT 242
Query: 87 LVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
V LC++ F+ V ++D+G+ ++ YN +I Y G + L EM G
Sbjct: 243 TVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAG 302
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P TY S+L+ + + + M+ K + P S Y I K
Sbjct: 303 -GPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKP----SVTTYGIMLHGYATKG 357
Query: 202 YAAEM--IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+EM + I A +K G + +A+ I++ + ++G++ Y
Sbjct: 358 ALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYG 417
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A ++ LCK + ++ ++ G P + S V C KW++VEEL +L+
Sbjct: 418 ALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV 477
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ + ++++ C ++ + L IE + DV +Y+ L+DG G ++EA
Sbjct: 478 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ + M + + S S+ ++ C + A + +ML G P TY ++ G
Sbjct: 538 SKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597
Query: 439 F 439
Sbjct: 598 L 598
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 173/431 (40%), Gaps = 48/431 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA-SCLYGAMV 74
S+++ C+ G G + ++ G+ N LL+ L + A L M
Sbjct: 98 SILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMP 157
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSS----VMYNLVIDFYSKKG 126
G P+ +++++ + LC + E L LL D ++S V Y+ VI+ + +G
Sbjct: 158 ELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEG 217
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
++ EM + R + P TY++++DG K ++ DR
Sbjct: 218 QVDKPYNLFLEMMD-RGIPPDVVTYTTVIDG---LCKAQLFDR----------------- 256
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
AE +F++ D ++ DT C++ G+ KE +++ +
Sbjct: 257 -----------------AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
S G Y + +N LCK + E ++ +G P + KG
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E+ +LL+ ++ G+ + + Y IDKA+ + K+ + S D +Y L
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+D L K GR+++A F+ M V F +V LC + + K + EML +G
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479
Query: 426 KPDEATYKQVI 436
P+ + ++
Sbjct: 480 HPNIVFFNTIL 490
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/540 (19%), Positives = 202/540 (37%), Gaps = 109/540 (20%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDAL-------- 57
G ++ Y+ G+ ++++ MR G P + AL+DAL
Sbjct: 372 NGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDD 431
Query: 58 ----YRQ--NE------IRLASCLYG---------------AMVRDGVSPNKFTWSLVAQ 90
+ Q NE + +S +YG M+ G+ PN ++ +
Sbjct: 432 AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILC 491
Query: 91 ILCRSGKFEVVLGLLDS----GIYSSVM-------------------------------- 114
LC+ G+ L+DS G+ V+
Sbjct: 492 NLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKP 551
Query: 115 ----YNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
YN ++ Y K G +A+ +M NG +TPG TY++IL G + ++ +
Sbjct: 552 DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG--ITPGVVTYNTILHGLFQTKRFSEAKE 609
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+ M+ K + + ++ L A +F+ C + ++L T M+ A
Sbjct: 610 LYLNMINSG--TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K GR ++A+ ++ I G+ Y V L +E EE L + + G P
Sbjct: 668 LLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN----------- 338
+ L+ V +G LS + ++ +++ S L+ + S+
Sbjct: 728 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPK 787
Query: 339 -----------------RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
R+ID A +L ++ + DV TY+ +L GLF+ GR EA
Sbjct: 788 KYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 847
Query: 382 IFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ M + ++ ++ I+++ LC + +A K + G + + T+ +I +
Sbjct: 848 LYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALL 907
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 170/420 (40%), Gaps = 18/420 (4%)
Query: 33 EVYRM---MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
EV RM M G P +LL+ L + R A + +M+ G+ P+ T+ ++
Sbjct: 291 EVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIML 350
Query: 90 QILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
G + LL+ + + + ++N+ Y+K G A D N+M + L
Sbjct: 351 HGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM-RQQGL 409
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P +Y +++D + + + ++ M+ + + P + + ++ L + K
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS--LVYGLCTVDKWEKV 467
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E +F + I +L L KEGRV E ++ I G+ Y ++
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C +E LL +V G P + + + C G+ +L G+
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++++ ++ +A L++ + D+ TY+++L+GL K ++EA+++F
Sbjct: 588 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQ 647
Query: 385 YM----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +L ++ +F I++ L AM + G + TY+ V+ +
Sbjct: 648 NLCSKGLQLNII---TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLI 704
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/386 (17%), Positives = 156/386 (40%), Gaps = 23/386 (5%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S + + +L Y G +R M G P V N +L L++ A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDF 121
LY M+ G + +T++++ LC+S ++ L G+ +++ +N++I
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667
Query: 122 YSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A D + NG L TY +++ E D + M +
Sbjct: 668 LLKGGRKEDAMDLFAAIPANG--LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTA 725
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK---EGRVK 237
P + + ++++L G A + + ++ T ++ S + K
Sbjct: 726 PNSQML--NALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAK 783
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+ Y +++E + ++ K + ++ L R+++ +G P + + +
Sbjct: 784 SLPKKYRILNEANSSA----------LIKKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 833
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
G++ E +EL ++++ ++ + + ++ C + +D+A + +
Sbjct: 834 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 893
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIF 383
L++ T+++++ L K GR E+A+ +F
Sbjct: 894 LNIITFNIMIGALLKGGRKEDAMDLF 919
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 226 MLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
+L L RV EA+ + + E G Y + LC E + EE LL + +
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194
Query: 285 GYIPCAMELSRFVASQCG---KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
C + + G +G+ + L ++D+G+ D +++++ C +
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
D+A A+ ++ ++ TY+ L+ G G+ +E VR+ + M + ++ +
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC R+A D M+ G KP TY ++ G+
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGY 353
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Query: 270 QPEEVCGLLRDVVERGYI---PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ E V L +V YI P S + C G + +L G +D
Sbjct: 71 ESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHI 130
Query: 327 CCSSLMEYYCSNRQIDKAI-ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ L+ C +++ +A+ L ++ +L D +Y++LL GL + R EEA+ +
Sbjct: 131 VINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHM 190
Query: 386 MKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + +V S S+ V++ ++ K EM+ G PD TY VI G
Sbjct: 191 MADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGL 248
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC-GKGKWKEVEELLSAV 316
Y + C+ E +++ G+ + +++ + C GK + ++ LL +
Sbjct: 97 YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRM 156
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-HIKIEKLKGSL--DVATYDVLLDGLFKD 373
+ G + D+ + L++ C+ ++ ++A+ L H+ + S +V +Y +++G F +
Sbjct: 157 PELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTE 216
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
G++++ +F M + + ++ V+ LC + +A +M+ G KP+ TY
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY 276
Query: 433 KQVISGFM 440
+I G++
Sbjct: 277 NCLIHGYL 284
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 192/445 (43%), Gaps = 22/445 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D A + ++D G + + V G + C L+D L++ ++ + A
Sbjct: 303 GVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEA 362
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDF 121
++ A+ + + PN T++ + C+ G E V LL + I +V+ Y+ +I+
Sbjct: 363 EDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIING 422
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD------RIVGLMV 175
Y+KKG A + + +M + +N+ P Y+ ++DG + K E++ ++ GL V
Sbjct: 423 YTKKGILDEAINVMKKMLD-QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKV 481
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
L D ++ L + AE + K + L ++ K G+
Sbjct: 482 NNVLF--------DVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGK 533
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
A+ + ++E+ I Y +N L EH E + ++E G P +
Sbjct: 534 ESAALNMVEEMTEKSIPFDVVTYNVLINGLL-EHGKYEAKSVYSGMIEMGLAPNQATYNI 592
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ + C +G+ EL + + ++ S C++L+ +I+KA+ + ++ +
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMG 652
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
++ + VLL+ K G+ +++ + + ++ + ++ ++ ++ C L+ +KA
Sbjct: 653 IHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKAT 712
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
M++ G D TY +I G+
Sbjct: 713 SVLKYMIRDGFVADTVTYNALIRGY 737
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 190/430 (44%), Gaps = 10/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ Y+ KG+ + + V + M +P L+D + + +A+ LY M
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKL 476
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGA 130
G+ N + ++ L R + + LL + V Y ++D + K G A
Sbjct: 477 SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESA 536
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + + EM +++ TY+ +++G + K E G M+E L P + +
Sbjct: 537 ALNMVEEMTE-KSIPFDVVTYNVLINGLLEHGKYEAKSVYSG-MIEMGLAPNQ--ATYNI 592
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ G+ A ++ KI TC ++ LS+ G +++A+ + + +S G
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMG 652
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I + +N K + V + +V+ G + + C K+
Sbjct: 653 IHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKAT 712
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L ++ G + D+ ++L+ YC + + KA+A + ++ S ++ TY++LL GL
Sbjct: 713 SVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGL 772
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G M E +FD MKE + +S++ ++S + +++++ + EM+ G P
Sbjct: 773 LGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKT 832
Query: 430 ATYKQVISGF 439
+TY +IS F
Sbjct: 833 STYNVLISDF 842
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 211/494 (42%), Gaps = 70/494 (14%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLF-----MDGLE----VYRMMRVYGFVPAVSACNALL 54
+ + R + D L+L D ++ + GLE +Y M + GF+P V ++++
Sbjct: 221 NIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIV 280
Query: 55 DALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV-----------------AQILCRSGK 97
+ L + + A L M + GV PN ++ + +Q++ R
Sbjct: 281 NGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMT 340
Query: 98 FEVVL------GLLDSG-----------------IYSSVMYNLVIDFYSKKGDFGAAFDR 134
++V+ GL S I +S+ Y +ID Y K GD
Sbjct: 341 LDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESL 400
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L EM +++ P TYSSI++G Y K + D + +M KK+L ++ + N YV
Sbjct: 401 LQEM-EEKHINPNVITYSSIING---YTKKGILDEAINVM--KKMLDQNIIP-NAYVYAI 453
Query: 195 LSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
L D GK A ++ +++ + ++ L + R+ EA ++ ++ RG
Sbjct: 454 LIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRG 513
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + +Y + ++ K + ++ ++ E+ + + + GK+ E +
Sbjct: 514 LLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAK 572
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ S +++ GL + + +++ YC ++D A+ L +++ K T + L+ GL
Sbjct: 573 SVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGL 632
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKN-----HDEMLKMGH 425
+ G +E+A+ + + M + + + +V+ R+ + N H++++ MG
Sbjct: 633 SEAGEIEKAMNVLNEMSVMGIHPN----LVIHRVLLNASSKSGKANAVLQMHEQLVDMGL 688
Query: 426 KPDEATYKQVISGF 439
K ++ Y +I F
Sbjct: 689 KINQEAYNNLIVVF 702
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 187/460 (40%), Gaps = 84/460 (18%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
N L+D + E+ LA L M ++G+ + +++ + C+ G+++ LL
Sbjct: 151 NTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISE 210
Query: 108 --GIYSSVMYNL---------------------VIDFYSKKGDFGAAFDRLNEMC-NGRN 143
G+ SV +N+ +I Y K+ A EM NG
Sbjct: 211 SRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIING-- 268
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
P TYSSI++G + + + ++ M + + P H +I L G +
Sbjct: 269 FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHV--AYTTLIDSLFKAGSAWE 326
Query: 204 AEMIFKRACDEKIELQDDT-----CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
A AC ++ ++ T C ++ L K + KEA ++ +S+ + Y
Sbjct: 327 A-----FACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITY 381
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
A ++ CK E V LL+++ E+ P + S + KG E ++ +LD
Sbjct: 382 TALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLD 441
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALH--IKIEKLKGS------------------- 357
+ ++ +++ + L++ YC + + A L+ +K+ LK +
Sbjct: 442 QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDE 501
Query: 358 --------------LDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVI 399
LD Y L+DG FK G+ A+ + + M E VV+ + V+
Sbjct: 502 AEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYN--VL 559
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L H K K++ + M++MG P++ATY +I +
Sbjct: 560 INGLLEHGKYEAKSV--YSGMIEMGLAPNQATYNIMIKAY 597
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 154/363 (42%), Gaps = 8/363 (2%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLLDSG 108
+L+D ++ + A + M + + T++++ L GK+E V G+++ G
Sbjct: 523 SLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMG 582
Query: 109 IYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ + YN++I Y K+G+ A + NEM + P T ++++ G + E +
Sbjct: 583 LAPNQATYNIMIKAYCKQGELDNALELWNEM-KSHKIMPSSITCNTLVVGLSEAGEIEKA 641
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
++ M + P L + ++ S GK A + ++ D +++ + ++
Sbjct: 642 MNVLNEMSVMGIHPN--LVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI 699
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+ K+A + + G Y A + C+ ++ ++ G
Sbjct: 700 VVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVS 759
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + + G G E +EL + + GL D+ +L+ Y ++I L
Sbjct: 760 PNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRL 819
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCH 406
+ ++ +TY+VL+ K G+M++A + + M+ V SSS++ I++ C+
Sbjct: 820 YCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCN 879
Query: 407 LKE 409
L +
Sbjct: 880 LSK 882
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 159/378 (42%), Gaps = 33/378 (8%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSG--KF--EVVLGLLDSGIYSSVM-YNLVIDFYSKKGD 127
MV+ + T +++ + CR G K+ ++ L+ G V+ +N +ID Y K G+
Sbjct: 103 MVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGE 162
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A D + M L +Y+++++G + + + + ++ + E + +
Sbjct: 163 MSLALDLVERM-RKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFN 221
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHL 245
D I+K D+ + L+ D T ++ K+ ++EA +Y
Sbjct: 222 IDDRIKK------------------DDNLNLEADLITYTTIISTYCKQHGLEEARALYEE 263
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ G Y + VN LCK+ + E LLR++ + G P + + + S G
Sbjct: 264 MIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGS 323
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E S ++ +G+ LD C++L++ + + +A + + KL + TY
Sbjct: 324 AWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTA 383
Query: 366 LLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
L+DG K G ME + M+E V++ SS + ++ L E MK +ML
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMK---KML 440
Query: 422 KMGHKPDEATYKQVISGF 439
P+ Y +I G+
Sbjct: 441 DQNIIPNAYVYAILIDGY 458
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 55/354 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ Y +G + LE++ M+ + +P+ CN L+ L EI A + M
Sbjct: 591 NIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSG----------------------- 108
G+ PN ++ +SGK VL L+D G
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710
Query: 109 -------------IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+ +V YN +I Y + A +M N ++P TY+ +L
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLN-EGVSPNIVTYNLLL 769
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G D + M E L P S D +I +G + ++ +
Sbjct: 770 GGLLGAGLMAERDELFDKMKENGLNPDA--STYDTLISGYGKIGNKKESIRLYCEMVAQG 827
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK-EHQPE-- 272
+ T ++ +K G++ +A ++ + + RG+ S Y + C P+
Sbjct: 828 FVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLD 887
Query: 273 ---------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ L+ ++ ++G++PC ++ ++ GK + E+LL +
Sbjct: 888 RTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIF 941
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 128/309 (41%), Gaps = 8/309 (2%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
VY M G P + N ++ A +Q E+ A L+ M + P+ T + + L
Sbjct: 574 VYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLS 633
Query: 94 RSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+G+ E + +L+ GI+ + V++ ++++ SK G A +++E L
Sbjct: 634 EAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVL-QMHEQLVDMGLKINQ 692
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
Y++++ R T+ + ++ M+ + + +I+ + A +
Sbjct: 693 EAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTY--NALIRGYCESSHVKKALATY 750
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ +E + T +L L G + E +++ + E G+ S Y ++ K
Sbjct: 751 TQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKI 810
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+E L ++V +G++P + ++ GK + ELL+ + +G+ S
Sbjct: 811 GNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTY 870
Query: 329 SSLMEYYCS 337
L+ +C+
Sbjct: 871 DILICGWCN 879
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 192/472 (40%), Gaps = 47/472 (9%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + +A S V+ YS G+ + L + +M+ G P +S CN + L + N++ A
Sbjct: 227 GIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKA 286
Query: 67 -------------------SCLY----------------GAMVRDGVSPNKFTWSLVAQI 91
+CL M G P+K ++ V
Sbjct: 287 LRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAF 346
Query: 92 LCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC+ K E V L+++ + +S V YN +I SK G A L E +
Sbjct: 347 LCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLRE-AEEKGFH 405
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
YS+++D + + + + +V M K P + +I +GK A+
Sbjct: 406 IDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD--VVTYTAIIDGFCRVGKIDEAK 463
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ ++ + T +L L G+ EA ++ ++ E T Y A ++ L
Sbjct: 464 KMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGL 523
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+E + E C L R+++E+G++P ++++ + S C ++ L L KG ++
Sbjct: 524 RREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNV 583
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+S++ +C +D A+++ + D TY L D L K R++EA +
Sbjct: 584 VNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVK 643
Query: 386 MKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M + + ++ V+ R C + MK ++M+ +P + Y QVI
Sbjct: 644 MLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI--ARQPFKTVYNQVI 693
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 166/429 (38%), Gaps = 45/429 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD S L + R+M G + A + ++ + R +R A + M + G
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V P+ + +L + K E L L+ +GI ++ YN +I Y A
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGNDYV 191
+ + EM + P +Y +++ + K E R++ MV+ L+P
Sbjct: 323 ELIAEM-PFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV------- 374
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
T ++ ALSK G +A+ E+G
Sbjct: 375 ------------------------------TYNTLIYALSKHGHADDALVFLREAEEKGF 404
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+ Y A V+ CK ++ L+ D+ +G P + + + C GK E ++
Sbjct: 405 HIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKK 464
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L + G ++ + L+ C N + +A + E+ + + TY ++ GL
Sbjct: 465 MLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLR 524
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
++G++ EA + M E + + + +++ LC + + A K +E L G +
Sbjct: 525 REGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVV 584
Query: 431 TYKQVISGF 439
+ VI GF
Sbjct: 585 NFTSVIYGF 593
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 118/307 (38%), Gaps = 39/307 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L+ H G ++ E+ + + + P +A++ L R+ ++ A L M+
Sbjct: 482 TVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIE 541
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS------KKGDFG 129
G PN +L+ Q LCR+ L+ ++ N V++F S + GD
Sbjct: 542 KGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVN-VVNFTSVIYGFCQIGDLD 600
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLM-------------- 174
AA L +M N P TY+++ D ++ E S+ IV ++
Sbjct: 601 AALSMLEDMYLS-NKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAV 659
Query: 175 ----------------VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+EK + + F + + VI+KL G AE + + +L
Sbjct: 660 IHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKL 719
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
TC ++++ +G A ++ + R + L + P E L+
Sbjct: 720 DAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLM 779
Query: 279 RDVVERG 285
VERG
Sbjct: 780 LRFVERG 786
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 185/431 (42%), Gaps = 23/431 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++ L+++ Y +G +D M GF ++ +CN +L+AL N+
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVMYNLVIDFYSKKGDFG 129
+ + T ++V LC GK +L + + ++V YN ++++Y KKG
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCK 281
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+A L++M + TY+ ++D + +++ + ++ M E L P +
Sbjct: 282 SALRILDDM-EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE--CSYN 338
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I GK A IF + + ++ T ++ + GR EA ++ + +
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ R+ + K Q +L+ ++ G P + S + C G E
Sbjct: 399 GVRPRE---------VSKAKQ------ILKCMLADGIDPDVITYSALINGMCKMGMIHET 443
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+E+LS + G+L ++ ++L+ Y+C +A+ + I + + ++ LL
Sbjct: 444 KEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCS 503
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+++G + EA + YM +K+ +SF ++ C + +A +D M++ G PD
Sbjct: 504 FYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 563
Query: 429 EATYKQVISGF 439
TY ++ G
Sbjct: 564 ICTYGSLLRGL 574
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/431 (19%), Positives = 180/431 (41%), Gaps = 44/431 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ------------- 60
+ + ++D Y +G ++ VY M +G+ P + +LL L +
Sbjct: 531 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 590
Query: 61 ------------NEIRLASCLYGA----------MVRDGVSPNKFTWSLVAQILCRSGKF 98
N + + C +G MV + P+ +T++++ C+ GK
Sbjct: 591 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKI 650
Query: 99 EVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
L LL + G+ ++ Y +++ +G AA E+ L Y+S
Sbjct: 651 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 710
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
+++G + + +R++ M E ++ P + + ++ G+ +++
Sbjct: 711 MMNGYLKGGQINEIERLMRNMHENEVYPSS--ASYNILMHGYIKKGQLSRTLYLYRDMVK 768
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYH--LISERGITVRDSDYYAFVNVLCKEHQP 271
E I+ + T ++ L + G ++ A++ ++ E G+ + + Y A +N C+
Sbjct: 769 EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDI 828
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ L D+ G +P + S V C GK +E + S+++ G++ ++L
Sbjct: 829 DGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTL 888
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
M C +ID A L +E +DV TY+VL+ GL + +A+ +++ MK +
Sbjct: 889 MHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGL 948
Query: 392 VSSSSFVIVVS 402
+ + + I ++
Sbjct: 949 LPNITTYITLT 959
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 171/403 (42%), Gaps = 14/403 (3%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVL 102
V++ N ++D+ ++ + A +Y MVR G P+ T+ + + LC+ G E ++
Sbjct: 529 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 588
Query: 103 GLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
LL+ I + L++ K G A D +M RN+ P TY+ +LDG +
Sbjct: 589 YLLEKACAIDEKTLNTLLVGI-CKHGTLDEALDLCEKMVT-RNILPDTYTYTILLDGFCK 646
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA-CDEKIELQ 219
K + ++ +M+EK L+P ++ L + G+ AA +F+ C E +
Sbjct: 647 RGKIVPALILLQMMLEKGLVPDTI--AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 704
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
M+ K G++ E ++ + E + + Y ++ K+ Q L R
Sbjct: 705 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 764
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL--DKGLLLDSFCCSSLMEYYCS 337
D+V+ G P + + C G + + L ++ + GL +L+ C
Sbjct: 765 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCR 824
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSS 396
ID A L ++ L ++ GL K G++EEA+ +F M+ V + ++
Sbjct: 825 VGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIAT 884
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F ++ LC ++ A M G K D TY +I+G
Sbjct: 885 FTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 927
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 168/407 (41%), Gaps = 15/407 (3%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+ MR P + N L+ + + +I LA ++ M+R + P+ T++ + CR+
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRN 382
Query: 96 GKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
G+ + V+Y + I + + A L M + P TYS+++
Sbjct: 383 GRTDEA---------RRVLYEMQITGVRPR-EVSKAKQILKCML-ADGIDPDVITYSALI 431
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + I+ M + +LP + L ++ G A F
Sbjct: 432 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT--LVFYFCKAGHAKEALKYFVDIYRSG 489
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ +L + +EG + EA Q +S I+ + + ++ C+ E
Sbjct: 490 LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF 549
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ ++V G+ P + C G + +E + +L+K +D ++L+
Sbjct: 550 SVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 609
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + +D+A+ L K+ D TY +LLDG K G++ A+ + M E +V +
Sbjct: 610 CKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDT 669
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEML-KMGHKPDEATYKQVISGFM 440
++ +++ L + +++ A E++ K G D Y +++G++
Sbjct: 670 IAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 716
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/415 (18%), Positives = 180/415 (43%), Gaps = 12/415 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ + M G P V +AL++ + + I + M + GV PN ++ +
Sbjct: 410 QILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 469
Query: 93 CRSGK----FEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++G + + + SG + +SV++N ++ + ++G A ++ + + ++
Sbjct: 470 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEA-EQFKQYMSRMKISFD 528
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
++++ I+D + + + MV P G+ +++ L G A+
Sbjct: 529 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS--LLRGLCQGGHLVQAKEF 586
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
++ + + T +L + K G + EA+ + + R I Y ++ CK
Sbjct: 587 MVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 646
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK-GLLLDSF 326
+ LL+ ++E+G +P + + + +G+ K + ++ K GL D
Sbjct: 647 RGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 706
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DY 385
+S+M Y QI++ L + + + A+Y++L+ G K G++ + ++ D
Sbjct: 707 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 766
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML--KMGHKPDEATYKQVISG 438
+KE + ++ +++ LC + A+K ++M+ + G +P Y +I+
Sbjct: 767 VKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINA 821
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 123/326 (37%), Gaps = 62/326 (19%)
Query: 17 LVLDCYSHKGLFMDGL-------EVYRMMR------VYGFVPAVSACNALLDALYRQNEI 63
L DC ++ + M+G E+ R+MR VY P+ ++ N L+ ++ ++
Sbjct: 701 LYADCIAYNSM-MNGYLKGGQINEIERLMRNMHENEVY---PSSASYNILMHGYIKKGQL 756
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL------DSGIYSS-VMYN 116
LY MV++G+ P+ T+ L+ LC G E+ + L +SG+ Y
Sbjct: 757 SRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYI 816
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+I+ + GD AF+ L E + P SSI+ G
Sbjct: 817 ALINAKCRVGDIDGAFE-LKEDMKALGVVPSEVAESSIVRG------------------- 856
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L GK A ++F + T ++ L KE ++
Sbjct: 857 ------------------LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 898
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A + L+ G+ V Y + LC + + L ++ +G +P
Sbjct: 899 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 958
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLL 322
+ G ++ E+LL + D+G++
Sbjct: 959 TGAMYATGTMQDGEKLLKDIEDRGIV 984
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV--ASQCG 302
++ + G+ Y V++L + P + +LR + G+ C+ S + S+C
Sbjct: 98 IVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGF-SCSAIFSSLLRTISRCD 156
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLME--------YYCSN-----RQIDKA--IAL 347
V+ L++A + +G +LD+ M+ + C+N I+K+ + L
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWL 216
Query: 348 HIKIEKL--KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLC 405
+K E L K LDV T +++L+ L G++ +A + MK ++ ++ ++ +++
Sbjct: 217 FLK-ESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYV 275
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ A++ D+M K G + D TY +I
Sbjct: 276 KKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 58/404 (14%)
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSGIYS 111
ALY + + + R V P+ ++ + ILC+ S ++ ++D IY
Sbjct: 13 ALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYP 72
Query: 112 SVM-YNLVI----DF----------YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
V+ YN +I +F +S G A LN+M + +TP T+++++D
Sbjct: 73 DVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMT-SKTVTPNIRTFTTLVD 131
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + + + + ++ +M+++++ P ++ S M +
Sbjct: 132 GLCKDGEVKKARNVLAIMIKQRVEPN--------IVTYNSLMDGYF-------------- 169
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L KE V +A Q+++ IS RG+T Y +N LCK +E
Sbjct: 170 -------------LVKE--VNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAAN 214
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L +++ + +P + + + C + +V + + + D+G + +SL++ C
Sbjct: 215 LFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLC 274
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSS 395
N Q+DKAI L KI+ ++ TY +L+DGL K+GR+ +A ++ D + + + +
Sbjct: 275 KNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDAR 334
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++++ LC L +A+ +M PD TY+ I
Sbjct: 335 IYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRAL 378
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 160/384 (41%), Gaps = 24/384 (6%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP- 80
Y H + G + + R+ P V N ++D L + + LY M+ + P
Sbjct: 15 YFHDHVIAKGFHLNHIERLL-VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPD 73
Query: 81 ----NKFTWSLVAQILCRS---------GKFEVVLGLLDSGIYSSVMYNL-----VIDFY 122
N +SL+ + + G+ + +GLL+ +V N+ ++D
Sbjct: 74 VVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGL 133
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G+ A + L M R + P TY+S++DG ++ + ++ + + + P
Sbjct: 134 CKDGEVKKARNVLAIMIKQR-VEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPN 192
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +I L A +FK + + ++ L K R+ +
Sbjct: 193 --VRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDF 250
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ +RG Y + ++ LCK HQ ++ LL + +G P + V C
Sbjct: 251 IGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCK 310
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ ++ +E+ +L+KG LD+ + ++ C +D+A++L K+E K + D T
Sbjct: 311 NGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVT 370
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYM 386
Y++ + LF+ R E + IF ++
Sbjct: 371 YEITIRALFESDR-NEILYIFIFL 393
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 192/485 (39%), Gaps = 79/485 (16%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +Y M G +P V +AL+D L R A L+ M + GV+PN T+
Sbjct: 277 EAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFI 336
Query: 90 QILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
L + + LGLL + V MY V+D K+G A D L + N+
Sbjct: 337 DSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALS-DNI 395
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK-----HFLSG---------NDY 190
TP TY+ ++D R + +++++ M EK + P L+G
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAG 455
Query: 191 VIQKLSDMG-----KTY--------------AAEMIFKRACDEKIELQDDTCGCMLKALS 231
++K+ D G TY AA +++ E +E + ++ L
Sbjct: 456 YMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLR 515
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K G ++EA ++ + ERG+ + +Y ++ L K + ++++ER P A+
Sbjct: 516 KNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAV 575
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HI 349
+ F+ C GK+ E + L + + GL D ++++ C KA+ L +
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV---------------SS 394
K +K +L TY L+ GL + G +E+A + + M S
Sbjct: 636 KWSSIKPNL--ITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSR 693
Query: 395 SSFVI---------------------VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
S +VI +V LC RKA DEML G PD T+
Sbjct: 694 SPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFN 753
Query: 434 QVISG 438
+I G
Sbjct: 754 ALILG 758
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 175/413 (42%), Gaps = 11/413 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V M G V N L+ + + A + M DGV P+ T + +
Sbjct: 209 LAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGE 268
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C+ + E L + + S V+ ++V +D + G F A+ EM + + P
Sbjct: 269 YCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREM-DKIGVAP 327
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY + +D + ++ S ++G MV + + L V+ +L GK A+
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV--AMDLVMYTTVMDRLGKEGKIEEAKD 385
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + A + I T ++ A + G + A Q+ + E+ ++ + + +N L
Sbjct: 386 VLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLV 445
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + G +R + + G P + + + ++ +L +G+ ++F
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SL+ N I++A AL + + LD Y L+DGLFK G M A+++ +
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565
Query: 387 KELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
E + +S + V + ++ LC L + +A EM G +PD+ATY +IS
Sbjct: 566 ME-RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMIS 617
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 191/498 (38%), Gaps = 75/498 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V+D +G + +V R P L+DA R I A + M
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE 427
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGA 130
VSPN T+S + L + G G + DSGI +V+ Y +ID + K A
Sbjct: 428 KSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEA 487
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH------- 183
A D +M + F S+++G R+ E ++ + M E+ LL H
Sbjct: 488 ALDVYRDMLHEGVEANNF-IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLM 546
Query: 184 ---FLSGN-----------------------DYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
F +GN + I L +GK A+ K + +E
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE 606
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T M+ A +EG +A+++ + + I Y V L + E+ L
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666
Query: 278 LRDVVERGYIPCAMELSR-----------------------------------FVASQCG 302
L ++ G+ P + R V C
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G ++ +L +L +G+ D+ ++L+ +C + +D A A + ++ S ++AT
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
++ LL GL GR+ EA + MK++ + ++ ++ I+V+ +A++ + EM+
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846
Query: 422 KMGHKPDEATYKQVISGF 439
G P +TY +IS F
Sbjct: 847 SKGFIPKASTYNSLISDF 864
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 162/398 (40%), Gaps = 19/398 (4%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSG 108
L+D L++ + A + ++ +SP+ +++ LCR GKF L ++G
Sbjct: 545 LMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTG 604
Query: 109 IYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
+ YN +I ++G+ A LNEM ++ P TY++++ G E +
Sbjct: 605 LEPDQATYNTMISAQCREGNTSKALKLLNEM-KWSSIKPNLITYTTLVVGLLEAGVVEKA 663
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
++ M P V+Q S Y + + + ++
Sbjct: 664 KYLLNEMASAGFTPTPLTY--RRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLV 721
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
L G ++A + + RGI + A + CK + ++ +G
Sbjct: 722 HVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLS 781
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + G+ E + ++ + GL ++ L+ Y ++ +K AL
Sbjct: 782 PNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYA--KKSNKVEAL 839
Query: 348 HIKIEKL-KGSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVV--- 401
+ E + KG + A TY+ L+ K G M +A +F MK V+ +SS++ I++
Sbjct: 840 RLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 899
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S+L + E+R +K +M ++G KP + T + F
Sbjct: 900 SKLRNGTEVRILLK---DMKELGFKPSKGTISSMSRAF 934
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 139/333 (41%), Gaps = 8/333 (2%)
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+V YN+ + S++G A L+EMC R + T S+ L G R + +
Sbjct: 117 TVSYNIFLAGLSEQGHGRLAPPVLSEMCK-RGVPWDGVTMSTALVGLSRTGLVGEAAALA 175
Query: 172 GLMVEKKLLPKHFLSGNDYVIQ---KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
++V + + + G + +I K+ DM AA + +R + + L ++
Sbjct: 176 EMLVRGRGIDGLGVVGWNALIDGYCKVQDMA---AALAVVERMTTQGLSLDVVGYNTLVA 232
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
G A ++ + G+ + + CK + EE L +V G +P
Sbjct: 233 GFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLP 292
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ LS V C G++ E L + G+ + + ++ +++++++ L
Sbjct: 293 DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLL 352
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHL 407
++ ++D+ Y ++D L K+G++EEA + + + + ++ ++V C
Sbjct: 353 GEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRA 412
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ A + +M + P+ T+ +++G +
Sbjct: 413 GNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLV 445
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 114/285 (40%), Gaps = 8/285 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG- 96
M GF P +L A + ++ M+ G+ + ++ + +LC G
Sbjct: 670 MASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGM 729
Query: 97 --KFEVVLG-LLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
K +VL +L GI ++ +N +I + K AF +M + + L+P +T++
Sbjct: 730 TRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH-QGLSPNIATFN 788
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++L G + +D ++ M + L P + D ++ + A ++
Sbjct: 789 TLLGGLESAGRIGEADTVICEMKKMGLEPNNLTY--DILVTGYAKKSNKVEALRLYCEMV 846
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + T ++ +K G + +A +++ + RG+ S Y +N K
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGT 906
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
EV LL+D+ E G+ P +S + G E LL +
Sbjct: 907 EVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLF 951
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 76/412 (18%), Positives = 149/412 (36%), Gaps = 63/412 (15%)
Query: 8 RDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R+ DA+ ++ ++C G F + + MR G P + N ++ A R+
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L M + PN T++ +V+GLL++G+ Y L +
Sbjct: 628 ALKLLNEMKWSSIKPNLITYT------------TLVVGLLEAGVVEKAKYLLNEMASAGF 675
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
+ R+ + C+G ++ GA + V + +V ++ + K +
Sbjct: 676 TPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATI 735
Query: 186 SGNDYVIQKLSDMGKTYAAEMI--------------FKRACDEKIELQDDTCGCMLKALS 231
++ + + ++ T+ A ++ + + + + T +L L
Sbjct: 736 VLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
GR+ EA + + + G+ + Y V K+ E L ++V +G+IP A
Sbjct: 796 SAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 855
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ ++ G + +EL S + +G+L S
Sbjct: 856 TYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTS-------------------------- 889
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR 403
+TYD+LL+G K E + MKEL S + +SR
Sbjct: 890 ---------STYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSR 932
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 182/433 (42%), Gaps = 10/433 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S ++ VL+ GL V+ M V G P S+ ++ +R +I+
Sbjct: 199 QGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQE 258
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVID 120
A M++ G P+ T +L+ LC +G + ++D G +++ + +ID
Sbjct: 259 ADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 318
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
KKG AF+ L EM NG P T+++++DG + TE + R+ +V +
Sbjct: 319 GLCKKGSIKQAFEMLEEMVRNG--WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDI 376
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ + +I K AEM+F R ++ + +T ++ K G A
Sbjct: 377 YKPNVHTYTS-MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRA 435
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ +L+ + G Y A ++ LCK+ + E LL G + + +
Sbjct: 436 YELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 495
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
QC + K+ + G D + L+ +C +++ ++ L + L
Sbjct: 496 QCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPT 555
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHD 418
TY ++ G K+G + A++ F MK V S ++ ++S LC + +A K ++
Sbjct: 556 KETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 615
Query: 419 EMLKMGHKPDEAT 431
M+ G P E T
Sbjct: 616 AMIDRGLSPPEVT 628
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 166/415 (40%), Gaps = 49/415 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+L GL + +R M GF P + +L+D L ++ I+ A + MVR
Sbjct: 279 TLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 338
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
+G PN +T + + LC+ G F + L L+ S IY + Y +I Y K+
Sbjct: 339 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLN 398
Query: 130 AA---FDRLNEMCNGRNLTPGFSTYSSILDGA-------RRYEKTEVSD----------- 168
A F R+ E + L P +TY+++++G R YE + D
Sbjct: 399 RAEMLFSRMKE----QGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTY 454
Query: 169 -RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA--------------AEMIFKRACD 213
++ + +K P+ + N L G TY A F R
Sbjct: 455 NAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNK 514
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
E ++ A ++ ++KE+ +++ L+ G+ Y + ++ CKE +
Sbjct: 515 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDL 574
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
++ G +P + ++ C K E +L A++D+GL +L
Sbjct: 575 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 634
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
YC ++ D A A+ I +E L L + T L+ L + ++ A F + E
Sbjct: 635 EYC--KRNDSASAM-IVLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 686
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 12/255 (4%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ S++G+ A + ++ + T C+L+ + G + A ++ +S RG
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ S + V ++ + +E L +++RG+IP + +++ C G
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++D G + +SL++ C I +A + ++ + +V T+ L+DGL
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-------SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
K G E+A R+F LK+V S ++ ++ C +L +A M +
Sbjct: 356 CKRGWTEKAFRLF-----LKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 410
Query: 424 GHKPDEATYKQVISG 438
G P+ TY +I+G
Sbjct: 411 GLFPNVNTYTTLING 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
CML+ S+ GR+ EA+ + + +G++ + + + + + ++ R
Sbjct: 175 CMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + V GK +E + LS ++ +G + D+ C+ ++ C N +++A
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSR 403
I K+ L ++ + L+DGL K G +++A + + M + + + ++
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354
Query: 404 LCHLKELRKAMKNHDEMLKMG-HKPDEATYKQVISGF 439
LC KA + ++++ +KP+ TY +I G+
Sbjct: 355 LCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGY 391
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 162/382 (42%), Gaps = 11/382 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+ +L+ + H + + + M G+ P L+ L++ N+ A L M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---GIYSS--VMYNLVIDFYSKKGDF 128
V G P+ T+ V LC+ G+ ++ L LL+ G + V+YN +ID K
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AFD N+M + + P TY+ ++ Y + + R++ M+EK + P L
Sbjct: 267 DDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD--LVFF 323
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIYHLIS 247
+ +I GK AE ++ K D ++K K RV+E ++++ +S
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+RG+ Y ++ + + + + +V G P M + + C G +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVL 366
+ + + + LD ++++E C +++ L + LKG +V TY +
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTM 502
Query: 367 LDGLFKDGRMEEAVRIFDYMKE 388
+ G + G EEA +F MKE
Sbjct: 503 MSGFCRKGLKEEADALFVEMKE 524
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 183/411 (44%), Gaps = 17/411 (4%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+MM++ G+ P++ N+LL+ N I A L MV G P+ T++ + L +
Sbjct: 135 KMMKL-GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 96 GKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
K + L++ + V Y VI+ K+G+ A + LN+M G+ +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVI 252
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y++I+DG +Y+ + + + M K + P F + +I L + G+ A +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY--NPLISCLCNYGRWSDASRLLSD 310
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNVLCKEH 269
++ I ++ A KEG++ EA ++Y ++ + Y + CK
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ EE + R++ +RG + + + + + + ++ G+ D +
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
L++ C+N ++ A+ + ++K LD+ TY +++ L K G++E+ +F + L
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SL 489
Query: 390 KVVSSS--SFVIVVSRLCH--LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
K V + ++ ++S C LKE A+ EM + G P+ TY +I
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADAL--FVEMKEDGPLPNSGTYNTLI 538
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 178/437 (40%), Gaps = 45/437 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P++ + LL A+ + N+ L L M G+S N +T+S+ CR + + L +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 105 LDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L + S V N +++ + A +++M P T+++++ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLF 191
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ K + +V MV K P G VI L G+ A + + KIE
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYG--AVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ L K + +A +++ + +GI Y ++ LC + + LL
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL---------------------- 317
D++E+ P + + + + +GK E E+L ++
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 318 --------------DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+GL+ ++ ++L+ + R D A + ++ D+ TY
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
++LLDGL +G +E A+ +F+YM++ + + ++ ++ LC ++ +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 423 MGHKPDEATYKQVISGF 439
G KP+ TY ++SGF
Sbjct: 490 KGVKPNVVTYTTMMSGF 506
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 163/378 (43%), Gaps = 10/378 (2%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYS 123
L+G MV+ P+ +S + + + KF++V+ L + GI ++ Y++ I+++
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++ A L +M P T +S+L+G + + +V MVE P
Sbjct: 122 RRSQLSLALAILGKMMK-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
++ L K A + +R + + T G ++ L K G A+ +
Sbjct: 181 VTFTT--LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + I Y ++ LCK ++ L + +G P + ++ C
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVAT 362
G+W + LLS +L+K + D ++L++ + ++ +A L+ ++ K K DV
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
Y+ L+ G K R+EE + +F M + +V ++ ++ ++ ++ A +M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 422 KMGHKPDEATYKQVISGF 439
G PD TY ++ G
Sbjct: 419 SDGVHPDIMTYNILLDGL 436
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 152/337 (45%), Gaps = 14/337 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
N ++D L + + A L+ M G+ P+ FT++ + LC G++ ++ +L+
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 107 SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
I V +N +ID + K+G A +EM ++ P Y++++ G +Y++ E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ M ++ L+ +I A+M+FK+ + + T
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTT--LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L L G V+ A+ ++ + +R + + Y + LCK + E+ L + +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + ++ C KG +E + L + + G L +S ++L+ R D+A
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL--RDGDEAA 549
Query: 346 ALHIKIEKLKG---SLDVATYDVLLDGLFKDGRMEEA 379
+ + I++++ + D +T+ L+ + DGR++++
Sbjct: 550 SAEL-IKEMRSCGFAGDASTFG-LVTNMLHDGRLDKS 584
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ GL D+V+ P +E S+ +++ K+ V L + + G+ + + S
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ Y+C Q+ A+A+ K+ KL + T + LL+G R+ EAV + D M E+
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +F +V L + +A+ + M+ G +PD TY VI+G
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ +N C ++ E L+ +VE GY P + + V K E L+ ++ K
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G D +++ C + D A+ L K+EK K DV Y+ ++DGL K M++A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 380 VRIFDYMKELKVVSSSSFVI--VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+F+ M E K + F ++S LC+ A + +ML+ PD + +I
Sbjct: 270 FDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 438 GFM 440
F+
Sbjct: 329 AFV 331
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 165/415 (39%), Gaps = 44/415 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + V+R M G P V + + L+ L R ++ A+ L M+ G PN T+
Sbjct: 68 FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127
Query: 88 VAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ LC+ GK + + L +Y V+YN++ID +SKKGD G A+ EM +
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE-K 186
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
P TY+S+L G R + + M+ + +P F N ++ MG
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN--LLDGFCKMGDMV 244
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +F L+ + GC +S Y +
Sbjct: 245 EAHRLF---------LEMRSLGCPPDVVS--------------------------YNTLI 269
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+C + +P E LLR+++ G P + + + G +L + GL
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D+F S++++ C ++ A + + + D A L+ GL + R+ E+ +
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389
Query: 383 FDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
F M + + V + +++ +LC K + E+ + G PD K ++
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 157/395 (39%), Gaps = 44/395 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
N LL+ L + Y M+ G PN +T+ + + LC++ +FE V G+
Sbjct: 21 NYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA 80
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G +V Y+++I + A + LNEM +G + P TY S+L G
Sbjct: 81 QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSG-------- 131
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
L MGK A +F R
Sbjct: 132 -----------------------------LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ SK+G + EA +++ + E+G Y + ++ ++ + V L +D++ +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+P + + C G E L + G D ++L+ CS + +A
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L ++ + D+ +Y++L+DG K G ++ A+++F + + + + S+ ++ L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ A +M+ G PD A ++ G
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 140/328 (42%), Gaps = 4/328 (1%)
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
+ ++ YN +++ +K G + N+M P TY +L + ++ E +
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDML-AAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+ M + P F +I L K A + D + T G +L
Sbjct: 74 VFRGMAAQGCSPNVF--SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G++KEA+ ++ + RG Y ++ K+ E L +++E+G IP
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ ++ KG++ V+ L +L +G + + F ++L++ +C + +A L +
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
++ L DV +Y+ L+ G+ G+ EA R+ M V S+ I++
Sbjct: 252 EMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVI 436
L A+K E+ K G +PD +Y +I
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 17/305 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +S KG + ++ M G +P V N+LL R+ E L+ M+R
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G PN FT++ + C+ G + L + G V+ YN +I KG
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L EM + P +Y+ ++DG Y K+ D + L E +PK L + +
Sbjct: 281 AQRLLREMIR-SGVGPDIVSYNILIDG---YSKSGALDHAIKLFYE---IPKSGLEPDAF 333
Query: 191 ----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I L GK AA ++FK ++ L + R+ E+ +++ +
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ +Y + LCK + ++VC + ++ ERG+ P +E+S+ + +
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP-DVEISKVILETLRRSDD 452
Query: 307 KEVEE 311
K+ E
Sbjct: 453 KDAAE 457
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 137/354 (38%), Gaps = 51/354 (14%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + ++++ M G P N L+D ++ ++ A L+ M+ G P FT
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT- 194
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
YN ++ +S+KG+FG +M +
Sbjct: 195 -----------------------------YNSLLSGFSRKGEFGRVQSLFKDMLR-QGCV 224
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL--PKHFLSGNDYVIQKLSDMGKTYA 203
P T++++LDG + + R L +E + L P +S N +I+ + GK +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHR---LFLEMRSLGCPPDVVSYNT-LIRGMCSKGKPHE 280
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A+ + + + + ++ SK G + AI++++ I + G+ Y ++
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LC+ + + +D++ G P A + V C + E EL A++
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV------ 394
Query: 324 DSFCCSSLMEYY-------CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
F C L+ Y C ++ D + ++ + S DV V+L+ L
Sbjct: 395 -KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 173/432 (40%), Gaps = 51/432 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + ++D S D +M G P V AL+ + + A ++ M
Sbjct: 13 AFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEM 72
Query: 74 VRDG-VSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSV-MYNLVIDFYSKKG 126
++ P+ F + ++ C+ + + L LL + I V +YN ++D +
Sbjct: 73 IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 132
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
F A+ L+E + +P TY+S++ GA + +K +++ I M+E+K+ P +
Sbjct: 133 RFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT--IV 190
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I LS G+ Y A + + EL ++ L K G + +A +Y ++
Sbjct: 191 SYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIM 250
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G Y ++ C+ + E GL + R Y P
Sbjct: 251 KRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCP------------------ 290
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
LD ++++ C R++D A AL ++ S D Y+VL
Sbjct: 291 ----------------LDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 334
Query: 367 LDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L G F+ GR EEA RI + + + V + ++ V++ C L M EM + G
Sbjct: 335 LHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRG 390
Query: 425 HKPDEATYKQVI 436
PD ATY +I
Sbjct: 391 IAPDFATYSALI 402
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 157/401 (39%), Gaps = 79/401 (19%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P A +L+DAL + N + A+ M G+ P+ T++ + + C++ E +
Sbjct: 9 PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68
Query: 105 LDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
I S+ +Y ++ID Y K+ A + L EM R + P Y+SI+DG
Sbjct: 69 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
R + FL ++ E + ++ C +
Sbjct: 129 CRSNR--------------------FLEAWKFL------------DETMVRQGCSPTVV- 155
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T +++ K ++K A+ I++ + ER I Y ++ L K + + ++
Sbjct: 156 ---TYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVV 212
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
R E+E L G L+ ++L++ C +
Sbjct: 213 R----------------------------EMETL-------GCELNVVIYTTLIDGLCKS 237
Query: 339 RQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+D A AL+ +I K G+ + TY L+D ++ R E A+ +FD++++ + + +
Sbjct: 238 GFLDDAYALY-RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMY 296
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
VVS LC + L A EM G D Y ++ G
Sbjct: 297 TAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHG 337
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 160/427 (37%), Gaps = 79/427 (18%)
Query: 20 DCYSHKGLFMDG----------LEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLA-S 67
DC+ + G+ +DG LE+ R MRV + P V N+++D L R N A
Sbjct: 81 DCFLY-GVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWK 139
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSSVM-YNLVIDFY 122
L MVR G SP T++ + + C++ K ++ + +L+ I +++ Y+++ID
Sbjct: 140 FLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGL 199
Query: 123 SKKGDFGAAFDRLNEM-------------------CNGRNLT---------------PGF 148
SK G A+ + EM C L P
Sbjct: 200 SKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQ 259
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY++++D R ++TE + +GL + ++ V+ L + A +F
Sbjct: 260 RTYATLIDTFCRNDRTETA---LGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALF 316
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCK 267
+ + +L + GR +EA +I L + G Y + C
Sbjct: 317 REMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCL 376
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
E L ++ +RG P S + G G+ + +L +L GL S
Sbjct: 377 ESG----MVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGV 432
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD----------------GLF 371
++ C +R+ D A L IE D A++ + D G
Sbjct: 433 LGRVVARLCWSRRGDLAAKL---IEMAMAVDDTASFSLPWDDEDGAAQDEDSQREELGSI 489
Query: 372 KDGRMEE 378
KDG M+E
Sbjct: 490 KDGAMQE 496
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 175/423 (41%), Gaps = 50/423 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L+++ M P V L+ AL A L+ M G PN T+
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 86 SLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
+++ LC+ K + +L + G+ SV+ YN +ID Y K+G AF+ L+ M
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM-E 396
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ P TY+ ++ G + K + ++ M+E+KL P
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI---------------- 440
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
T ++ K ++ A ++ L++E G+ Y
Sbjct: 441 ---------------------TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
F++ LCKE + EE L V +G + + + C GK LL +L+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L +S+ + L+E C +++ +A +L K+ + V TY +L+ + KDG + A+
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 381 RIFDYMKEL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++F++M L V + ++F+ L+E+ + +E G PD TY +I
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE---EGILPDLVTYTVLI 656
Query: 437 SGF 439
G+
Sbjct: 657 DGY 659
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 51/419 (12%)
Query: 32 LEVYRMMRVYG---FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
LEV+R M G F P + N +L +L + I +Y ++ + +SPN +T++ +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200
Query: 89 AQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
C+ G ++++ +Y+S + L P
Sbjct: 201 VNGYCKIG------NVVEAELYASKIVQ-------------------------AGLHPDT 229
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
TY+S++ G R + + + + +M +K N +I L + G+ A +F
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTN--LIHGLCEAGRINEALKLF 287
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
++ T ++ ALS GR EA+ +++ + E+G Y ++ LCKE
Sbjct: 288 ADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE 347
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
++ +E +L ++ E+G IP + + + C +G + E+L L++S C
Sbjct: 348 NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD-------LMESNSC 400
Query: 329 SSLMEYY-------CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
Y C R++ KA+AL K+ + K S + TY+ L+ G K +E A R
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M E +V ++ + + LC + +A D + G K +E Y +I G+
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 173/408 (42%), Gaps = 48/408 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
AL+D + +I +A L M+ D PN +T++++ + LC+ K + +V +L
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G+ +V+ Y ++I K G F A N M + P TY++ L E
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS-LGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D ++ M E+ +LP L +I + +G T+ A K D +
Sbjct: 632 EVDDVIAKMNEEGILPD--LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 226 MLKALSKEGRVKE-----------------------------AIQIYHLISERGITVRDS 256
++K LS E R+KE A++++ + E G T+ S
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVS 749
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A + C++ + EE GL+ + ERG P + + C G + E L+ A+
Sbjct: 750 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 809
Query: 317 LDKGL--LLDSF---CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
++ GL LL+S+ C +E SN +KA A+ + + D + VL+DGL
Sbjct: 810 VENGLLPLLESYKLLVCGLYIE--GSN---EKAKAVFHGLLSCGYNYDEVAWKVLIDGLL 864
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHD 418
K ++E + D M+E + + + RL + A+++H+
Sbjct: 865 KRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGALEDHE 912
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 153/370 (41%), Gaps = 11/370 (2%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S G ++ L ++ M+ G P V L+D L ++N++ A + M G+ P+
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 83 FTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
T++ + C+ G + +LD S ++ YN +I KK A LN+
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M R L+P TY+S++ G + E + R++ LM E L+P + I L
Sbjct: 430 MLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS--VFIDTLCK 486
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ A +F + ++ + ++ K G++ A + +
Sbjct: 487 EGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYT 546
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + LCKE + +E L+ ++ G P + + + G + ++ + ++
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G D ++ + Y S +++ + K+ + D+ TY VL+DG + G
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666
Query: 378 EAVRIFDYMK 387
R FD++K
Sbjct: 667 ---RAFDFLK 673
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 178/438 (40%), Gaps = 77/438 (17%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + +L +L + + LA L+ M+ GV +++ ++ + C +
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216
Query: 102 LGLL----DSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM---------CNGRNLTPG 147
GL+ D G S+V YN++I K A D N M R L G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276
Query: 148 F-------------------------STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
F + S +LDG R+ + E + R+ + E +++P
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
F + ++ + G A+ + D+ +E + T ++ +L K G + +A+ +
Sbjct: 337 IF--AYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCM 394
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ E+G+ + Y + +N CK+ + G L ++VE G P A S +A C
Sbjct: 395 LDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCR 454
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
KG EL + +KG+ +++ ++L+ +C +++D
Sbjct: 455 KGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMD-------------------- 494
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
EA R+F+ M E + + +F V+ C + ++RKA + +D+M+
Sbjct: 495 ---------------EASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMM 539
Query: 422 KMGHKPDEATYKQVISGF 439
G PD TY+ +ISG
Sbjct: 540 CRGLTPDNYTYRSLISGL 557
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 182/434 (41%), Gaps = 52/434 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +LD KG + + + VP + A NALL+ + + A L M
Sbjct: 306 SFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSD 365
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGA 130
G+ PN+ T++++ LC+ G + L +LD G+ +V YN +I+ KK D
Sbjct: 366 KGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDM 425
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L+EM LTP ++YS ++ G R + + M EK ++ N Y
Sbjct: 426 AMGFLSEMVE-IGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKG------VAWNTY 478
Query: 191 VIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
L + K A +F + + +E + T +++ G +++A Q+Y +
Sbjct: 479 TFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM 538
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
RG+T + Y + ++ LC L D G K
Sbjct: 539 MCRGLTPDNYTYRSLISGLC-----------LTD---------------------GASKA 566
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
K E ++ + + +L+ F ++L+ +C ++ +A + ++ G LD+ ++ ++
Sbjct: 567 K---EFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTII 623
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSSF-VIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ K E++ +F MKE V + F +++ + +A+ DEM+ GH
Sbjct: 624 VYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGH 683
Query: 426 KPDEATYKQVISGF 439
P+ TY +++
Sbjct: 684 LPNTVTYTALVNNL 697
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 201/473 (42%), Gaps = 47/473 (9%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++ +G+ D L + MR G V N+L++ +++++ +
Sbjct: 366 KGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDM 425
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSGI-YSSVMYNLVID 120
A MV G++PN ++S V LCR SG E+ + + G+ +++ + +I+
Sbjct: 426 AMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALIN 485
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ K A N+M NL P T++++++G + ++ M+ + L
Sbjct: 486 GFCKAKKMDEASRLFNKMTES-NLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLT 544
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P ++ + L+D G + A E + + + L + +L +EGR+ EA
Sbjct: 545 PDNYTYRSLISGLCLTD-GASKAKEFVADLENNCSV-LNKFSLTALLHGFCREGRLTEAY 602
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG--------------- 285
+++ ++ G + + V K+H E+ C L R++ E+G
Sbjct: 603 HVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMY 662
Query: 286 --------------------YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
++P + + V + C E L +L L +S
Sbjct: 663 SKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNS 722
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + ++Y+ + ++ A L+ + L+G L ++ + + L+ G K G+++EA+ +
Sbjct: 723 YTFNCFLDYFATEGNLETAKDLYFAM--LQGFLANIVSVNTLIKGFCKVGQIQEAIDLIS 780
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
E S+ V+ LC ++ +A++ +EML G KPD Y +I
Sbjct: 781 RSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILI 833
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 177/430 (41%), Gaps = 74/430 (17%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE+ M GFVP+ + C+ +LD L ++ + A L + + PN F ++ +
Sbjct: 286 ALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLN 345
Query: 91 ILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKG---DFGAAFDRLNEMCNGR 142
+C++G F +V + D G+ + V Y ++I K+G D DR+ E G
Sbjct: 346 NMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMRE--KGV 403
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+T Y+S+++ + + +++ + MVE L P +Y
Sbjct: 404 RMT--VYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPN----------------AASY 445
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+ ++ L ++G + A++++ ++E+G+ + A +
Sbjct: 446 SP---------------------VIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALI 484
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N CK + +E L + E P + + + C G ++ +L ++ +GL
Sbjct: 485 NGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLT 544
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D++ SL+ C KA +E L+ + LL G ++GR+ EA +
Sbjct: 545 PDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHV 604
Query: 383 FDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHD---------EMLKMGHKPDE 429
++ M +L ++ SF I+V A+K HD EM + G +PD
Sbjct: 605 WNEMAMWGGKLDLI---SFTIIV---------YAALKQHDSEKSCVLFREMKEKGVRPDN 652
Query: 430 ATYKQVISGF 439
+ +I+ +
Sbjct: 653 VFHTCMINMY 662
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 134/356 (37%), Gaps = 69/356 (19%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L+ +L + +G + V+ M ++G + + ++ A +Q++ + L+ M
Sbjct: 584 SLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREM 643
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
GV P+ +V + +I+ YSK+G+ A +
Sbjct: 644 KEKGVRPD------------------------------NVFHTCMINMYSKEGNMVQALN 673
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+EM +L P TY+++++ + ++ ++ K++L HFL N Y
Sbjct: 674 CWDEMIADGHL-PNTVTYTALVNNLCKSWHLSSAE-----LLCKEMLASHFLP-NSY--- 723
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
T C L + EG ++ A +Y + + G
Sbjct: 724 ----------------------------TFNCFLDYFATEGNLETAKDLYFAMLQ-GFLA 754
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ CK Q +E L+ E G+ P + S + C KG E EL
Sbjct: 755 NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELW 814
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ +L KG+ D + L+ + + + DK + ++I + K + T+ L G
Sbjct: 815 NEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 174/404 (43%), Gaps = 12/404 (2%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR----SGKFEV 100
P V ++D + N+++ A + M R+ V+PN+ T+++V LC+ S +EV
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 101 VLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
+ + D + V Y+ VI+ + K+G+ A + L EM + P TY+S++DG
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
R K + + +V M K + P F +I + K A ++K
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTF--SALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 219 QD-DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D T ++ K G +++A+++ ++ R Y + ++ LCK ++ L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
R + +G +P + + + C K L+ + D+ ++L++ YC
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-- 395
+I++A L ++ D TY L+ G R+EEA + + MK +
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ IVV+ K +A + EM+ P+ TY +I G
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 194/491 (39%), Gaps = 59/491 (12%)
Query: 6 EGRDSQSDA-----LSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYR 59
E RD +S A S V++ + +G E+ R M+ G P V +++D L R
Sbjct: 66 EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCR 125
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------V 113
++ A + M GV P+KFT+S + C + K + L L + SS V
Sbjct: 126 DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVV 185
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y +ID + K G+ A L M GR P TYSS+L G + + + +
Sbjct: 186 TYTALIDGFCKSGNLEKAMKMLGVM-EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M K +P + +I L K AA ++ + +L +
Sbjct: 245 MTSKGCVPN--VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV-VERGYIPCAME 292
GR++EA Q++ ++ + Y V C + EE LL ++ G P +
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----- 347
S VA ++ E E + ++ + + ++ SSL++ C ++D A+ +
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422
Query: 348 HIKIEKLKGSLD------------------------------VATYDVLLDGLFKDGRME 377
+ ++E G+ + + TY LL+G + GRME
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482
Query: 378 EAVRIFDYMK--------ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
A +F+ M+ +V +F ++ LC +E+ KAM +E+ +P E
Sbjct: 483 IAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAE 542
Query: 430 ATYKQVISGFM 440
++ G +
Sbjct: 543 EDCLAIVDGLL 553
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 164/394 (41%), Gaps = 30/394 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D + G +++ +M VP V ++LL L + ++ A L+ M
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGA 130
G PN T++ + LC + K + L+D + +V YN ++D Y + G
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTE--VSDRIVGLMVEKKLLPKHFL 185
A EM ++ P TY+ ++ G A R E+ + + ++ ++ +
Sbjct: 308 AKQLFKEMAT-KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ + + + EMI + + T ++ L K GRV A+++
Sbjct: 367 VAGYSRAKRFVEAAE-FIQEMIARNVAPNAV-----TYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + + + + + LC+ +E LL + G P + + + G+
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 306 WKEVEELLSAVLDKGL-------LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-S 357
+ EL + K L+ S+L+ C R+IDKA+A+ +E+L+
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV---VEELRSRE 537
Query: 358 LDVATYDVL--LDGLFKDGRMEEAVRIFDYMKEL 389
+ A D L +DGL + GR EEA ++ + + ++
Sbjct: 538 CEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 571
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 44/259 (16%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+++ G D S+V+ YS F++ E + M P ++L+D L +
Sbjct: 350 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 409
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDF 121
+ A + MV V P+ T++ V LCR
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRL-------------------------- 443
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM------- 174
GD A+ L M L PG TY+++L+G R + E++ + +M
Sbjct: 444 ----GDMDEAWKLLVAMA-AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKS 498
Query: 175 -VEKKLLPKHFLSGNDYVIQKLSDMGKTYA-AEMIFKRACDEKIELQDDTCGCMLKALSK 232
L+P+ S + K ++ K A E + R C E ++ C ++ L +
Sbjct: 499 SSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSREC----EPAEEDCLAIVDGLLR 554
Query: 233 EGRVKEAIQIYHLISERGI 251
GR +EA ++ + IS+ G+
Sbjct: 555 AGRTEEAGKLINSISKVGL 573
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 175/415 (42%), Gaps = 44/415 (10%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ + + M G P++ + ++ E+ A + G +++ G PN T + V +
Sbjct: 103 AISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMK 162
Query: 91 ILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC +G+ + + D+ + V Y +I+ K G AF L EM G+ +
Sbjct: 163 GLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM-EGQVVK 221
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+ I+D + K E++ + L + K+ DMG
Sbjct: 222 PNIVIYNMIIDS---FCKDELTCKARDLYL------------------KIVDMG------ 254
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
I+ T +++ + G+ E Q+ + + I + ++
Sbjct: 255 ----------IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C++ + E G+ +V+RG P + + ++ C G E +L V ++G+L D
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ + L+ YC ++ID+A++L ++ LD+ Y L+DGL K GR+ A +F
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424
Query: 386 M-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + ++ I++ C ++++ ++ M G P TY +I+G+
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 479
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 14/355 (3%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G +D ++ + M P + N ++D+ + A LY +V G+ P+ T+
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262
Query: 86 SLVAQILCRSGKF--------EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ + + CR+G++ E+V ++ +Y+ +N++ID + +KG A N
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYT---FNVLIDAFCRKGKMIEAQGMFNL 319
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M R P T+++++ G + + ++ + E+ +LP + +I
Sbjct: 320 MVK-RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPD--VWSYTILIIGYCK 376
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+ A +F + + L ++ L K GR+ A +++ I+ G
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 436
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ CK + L + + +G P + + + C + +E LLS +
Sbjct: 437 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 496
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
K L DS +SL + C + +I A L + +DVATY+VLLD K
Sbjct: 497 SKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 194/441 (43%), Gaps = 19/441 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + +++++ S KG F E+ M + G + N L+ ++ A
Sbjct: 237 GCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEA 296
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDF 121
+ L M+ G P T++ + LCR G+ LD + +M YN +I
Sbjct: 297 NDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYG 356
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
YS+ G+F A +E+ +NL P TY++++DG R +++ + M++ L P
Sbjct: 357 YSRLGNFAEALLLFSEL-RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCP 415
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE--LQDDTCGCMLKALS--KEGRVK 237
+ +++ MG A+ +F DE + L+ D + + K G
Sbjct: 416 D--VVTFTILVRGFCQMGNLPMAKELF----DEMLSRGLKPDCIAYTTRIVGELKLGNPS 469
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A + + G Y +N LCK ++ L++ + G +P + + +
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ G ++ EE+ S +L KG+ + L+ Y ++D A +++ S
Sbjct: 530 HAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMK 415
+V TY+ L+ GL K+ M+ A +F M E K VS + ++ I+++ +L+ + A+K
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEM-ESKGVSPNKYTYTILINENSNLQYWQDALK 648
Query: 416 NHDEMLKMGHKPDEATYKQVI 436
+ +ML KPD T+ ++
Sbjct: 649 LYKDMLDREIKPDSCTHSALM 669
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 189/441 (42%), Gaps = 11/441 (2%)
Query: 7 GRDSQSDA--LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GR+S+ L L++ ++ K + L V+ M G +P V CN +L L ++ +
Sbjct: 130 GRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVN 189
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVI 119
+Y M++ + P T++ + C+ G+ + +LD + V YN+++
Sbjct: 190 EVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLV 249
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ S KG+F A + + +M + L TY+ ++ G + E E ++ + M+ +
Sbjct: 250 NGLSGKGEFDRAKELIEQM-SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGA 308
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
LP + + ++ L +G+ A +E + + ++ S+ G EA
Sbjct: 309 LPT--VVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ ++ + + + Y ++ C+ + G+ D+++ G P + + V
Sbjct: 367 LLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G +EL +L +GL D ++ + KA + +++ D
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPD 486
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
+ TY+VL++GL K G ++A + M+ E V ++ ++ LRKA +
Sbjct: 487 LITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+MLK G P TY +I +
Sbjct: 547 DMLKKGIHPSVVTYTVLIHSY 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 135/318 (42%), Gaps = 8/318 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G F + L ++ +R VP+V N L+D R + +A + M++ G+ P+
Sbjct: 357 YSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD 416
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLN 136
T++++ + C+ G + L D + + Y I K G+ AF
Sbjct: 417 VVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKE 476
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM P TY+ +++G + + ++ +V M + ++P H + +I
Sbjct: 477 EM-KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS--IIHAHL 533
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
G AE +F + I T ++ + + GR+ A + + + ++G++
Sbjct: 534 ISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVI 593
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A + LCKE+ + L ++ +G P + + W++ +L +
Sbjct: 594 TYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDM 653
Query: 317 LDKGLLLDSFCCSSLMEY 334
LD+ + DS S+LM++
Sbjct: 654 LDREIKPDSCTHSALMKH 671
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 198/472 (41%), Gaps = 81/472 (17%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + +++ Y G GLE+ MR GF P N L+ + ++ +
Sbjct: 85 KGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDD 144
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK------------FEVVLGLLDSGIYSSV 113
A L M +DG+SP+ T++ LC SGK + VLGL I +
Sbjct: 145 AEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNI---I 201
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR-YEKTEVSDRIVG 172
YNL++ + K+G +L+ AR +EK +VS+ ++
Sbjct: 202 TYNLMLGGFCKEG---------------------------MLEEARALFEKMKVSENLM- 233
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
+ S N +++ L +GK A+++ K D +E + ++ L K
Sbjct: 234 ----------NRESYNIWLLG-LVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCK 282
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G + +A + L++ G+ Y ++ C + E +LR+++ G P
Sbjct: 283 NGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYT 342
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL----- 347
+ + S +G+ E EELL + +KG ++D+ C+ +++ C+N ++DKAI +
Sbjct: 343 CNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMW 402
Query: 348 -------------HIKI-----EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--K 387
+I + + K D+ +Y ++ GL K GR+ EA + F M K
Sbjct: 403 THGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK 462
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L+ S+ + + + C ++ A + +M K G TY +I G
Sbjct: 463 NLQ-PDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGL 513
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 190/446 (42%), Gaps = 36/446 (8%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++V+D G+ D + R+M G +P LL ++ A
Sbjct: 265 GMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEA 324
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDF 121
+ + M+RDG SPN +T +++ L + G+ E++ + + G + +V N+VID
Sbjct: 325 NNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDG 384
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE----K 177
G A + +N G T+ S G + + +GL+ + K
Sbjct: 385 LCNNGKLDKAIEIVN----------GMWTHGSAALG-------NLGNSYIGLVDDSDSRK 427
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
K +P L +I L G+ A+ F + ++ + + KEG++
Sbjct: 428 KCMPD--LISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
A ++ + ++G Y + + L ++Q E+ GL+ ++ ERG P + +
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN---RQIDKAIALHIKIEKL 354
+S C G+ K+ +L +L KG+ + S L++ +C +D+ + + +
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGH 605
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKA 413
K +L T++ LL G G + +A +F+ + V + + ++ LC ++L A
Sbjct: 606 KEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDA 661
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+++ G+ D A++ VI G
Sbjct: 662 SGILHKLIDKGYWFDPASFMPVIDGL 687
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y + KE + + V L +D+V G P + + C G + EL +
Sbjct: 24 YNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMP 83
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+KG + + L+ YC K + L ++ +L S + Y+ L+ K+G+ +
Sbjct: 84 EKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTD 143
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMK-----NHDEMLKMGHKPDEAT 431
+A ++ D M++ + +F +S LC ++ +A + DE+L + +P+ T
Sbjct: 144 DAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL-PQPNIIT 202
Query: 432 YKQVISGF 439
Y ++ GF
Sbjct: 203 YNLMLGGF 210
>gi|224081503|ref|XP_002306437.1| predicted protein [Populus trichocarpa]
gi|222855886|gb|EEE93433.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 170/376 (45%), Gaps = 45/376 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASC--LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P S + LL R+ + L+S + M+ G PN+FT + + LC +G+ + +
Sbjct: 119 PDRSTYHVLLSQSCREPDSSLSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRVDDAI 178
Query: 103 GLLD--SGIYS---SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L+ S +S + YN ++ K F + + ++EM + ++ P TY+ ++D
Sbjct: 179 LLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDN 238
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ +DR+V ++ E L P FL + +++ + K A I+K+ +E +E
Sbjct: 239 VCNAKNIREADRLVAVLKECGLKPDAFLY--NTIMKGYCLLNKGIEAVRIYKQMKEEGVE 296
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ LSK GRV EA ++ ++ E G Y + +N +C+E L
Sbjct: 297 PDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAAL 356
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
L + MEL KG +S ++L+ +C
Sbjct: 357 LEE----------MEL-------------------------KGCSPNSCTYNTLLHGFCK 381
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
R+++K + L+ I+K L+ A+Y + L ++GR+ EA +FDY E K ++ ++
Sbjct: 382 GRRLNKGVELYGVIKKGGMKLETASYATFVRALCREGRVAEAYEVFDYAVESKSLTDVAA 441
Query: 397 FVIVVSRLCHLKELRK 412
+ + S L LK+ R+
Sbjct: 442 YTTLESTLKWLKKARE 457
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 135/331 (40%), Gaps = 42/331 (12%)
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNG-RNLTPGFSTYSSILDGARRYEKTEVS--DRI 170
++N + Y+ + L+ M +L+P STY +L + R + +S ++
Sbjct: 86 LHNSFLQSYTSISTLDDSISLLDHMVKTLPSLSPDRSTYHVLLSQSCREPDSSLSSAQKV 145
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ LM+ K P F T +++L
Sbjct: 146 LNLMINKGFKPNQF-------------------------------------TVDVAIRSL 168
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI-PC 289
GRV +AI + S + Y V LCK V + ++ I P
Sbjct: 169 CSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPD 228
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + + C +E + L++ + + GL D+F +++M+ YC + +A+ ++
Sbjct: 229 LVTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYK 288
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLK 408
++++ D+ TY+ L+ GL K GR+ EA ++ M E + ++ +++ +C
Sbjct: 289 QMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREG 348
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A +EM G P+ TY ++ GF
Sbjct: 349 DVLGAAALLEEMELKGCSPNSCTYNTLLHGF 379
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 179/437 (40%), Gaps = 73/437 (16%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + D V+ Y L+ + ++ +G +V + N LL+AL + N
Sbjct: 116 GINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSV 175
Query: 67 SCLYG-AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
L+ + + GV PN FT +++ + LC KK
Sbjct: 176 HLLFKYSKSKFGVVPNVFTCNILIKALC------------------------------KK 205
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D A +EM + P TY++IL G ++
Sbjct: 206 NDVEGARKVFDEM-PSMGIVPNVVTYTTILGG--------------------------YV 238
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
S D + A+ +F D T ++ K+GR +A+++
Sbjct: 239 SRGDMI-----------GAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDE 287
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ E G+ D Y + CKE + E LL D++E+ YIP + + + CG+G+
Sbjct: 288 MEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGR 347
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYD 364
KE ++ +L K D+ S+L+ + C I +A L + E +G++ + TY+
Sbjct: 348 VKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFE--RGTISSLLTYN 405
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ G+ + G + EA R++D M E V + ++ +++ + + ++ +K +EML
Sbjct: 406 TLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDK 465
Query: 424 GHKPDEATYKQVISGFM 440
G +E+TY ++ G +
Sbjct: 466 GCLLNESTYLILVEGLL 482
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 157/351 (44%), Gaps = 50/351 (14%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF-- 98
+G VP V CN L+ AL ++N++ A ++ M G+ PN T++ + G
Sbjct: 186 FGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIG 245
Query: 99 -EVVLG-LLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
+ V G L D G + + Y +++D Y K+G F A ++EM + P TY I+
Sbjct: 246 AKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEM-EENGVEPNDITYGVII 304
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + K+ + ++ M+EKK +P L
Sbjct: 305 LGYCKERKSGEALNLLNDMLEKKYIPNSAL------------------------------ 334
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
C ++ L EGRVKEA +++ + ++ T ++ ++ LCKE E
Sbjct: 335 -------CCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEAR 387
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L + ERG I + + +A C G+ E L +L+KG + + F + L++ +
Sbjct: 388 KLFNEF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGF 446
Query: 336 CSNRQIDKAIALHIKIEKL--KGSL-DVATYDVLLDGLFKDGRMEEAVRIF 383
++ KA + +E++ KG L + +TY +L++GL K G+ EE + I
Sbjct: 447 L---KVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNIL 494
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
++ VE LL + D G+ +++ Y + A+ ++I+ V + +
Sbjct: 102 FEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNT 161
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKM 423
LL+ L ++ R +F Y K V + F I++ LC ++ A K DEM M
Sbjct: 162 LLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSM 221
Query: 424 GHKPDEATYKQVISGFM 440
G P+ TY ++ G++
Sbjct: 222 GIVPNVVTYTTILGGYV 238
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 172/371 (46%), Gaps = 11/371 (2%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDF 128
+ G + N T++ + Q L + KF+ V +L Y + V NL + YSK G
Sbjct: 159 QKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINL-MKHYSKCGFH 217
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
FD + P SS L+ + ++ +++ L ++ L+ K +
Sbjct: 218 EKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLL-LYAKRSLVYKPNVCIF 276
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSKEGRVKEAIQIYH-LI 246
+ +++ G +A + K + K + T ++ L + GR+KEA +++ ++
Sbjct: 277 NILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMV 336
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
S+ I Y +N C+E + + ++ + G P S V C GK
Sbjct: 337 SKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKL 396
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
++ + +L+ + GL D+ +SL+ ++ N QID+AI L ++++ D T++V+
Sbjct: 397 QDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVI 456
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
L GL ++GR +EA+ + + + + V ++ S+ IV++ L ELRKA K ML G
Sbjct: 457 LGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGF 516
Query: 426 KPDEATYKQVI 436
P AT +++
Sbjct: 517 VPHYATSNELL 527
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 148/361 (40%), Gaps = 43/361 (11%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV-S 79
C H+ +F L + ++R A+S+C L+ L N++ L L R V
Sbjct: 214 CGFHEKVFDAFLSIQTIVREKPSPKAISSC---LNLLVDSNQVDLVRKLLLYAKRSLVYK 270
Query: 80 PNKFTWSLVAQILCRSG----KFEVVLGLLDSGI-YSSVM-YNLVIDFYSKKGDFGAAFD 133
PN ++++ + CR G FEVV + +S Y +V+ Y+ ++D + G AF+
Sbjct: 271 PNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFE 330
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF--------- 184
EM + + P TY+ +++G R K + + ++ M P F
Sbjct: 331 LFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGL 390
Query: 185 -----LSGNDYVIQKLSDMGK-----TYAAEMIF---KRACDEKIEL---------QDDT 222
L V+ ++ G TY + + F DE IEL Q DT
Sbjct: 391 CKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADT 450
Query: 223 C--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+L L +EGR EA+ + + ++G+ + Y +N L + + + LL
Sbjct: 451 VTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGL 510
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++ RG++P + + C +G + L ++D G L++ C +R+
Sbjct: 511 MLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRK 570
Query: 341 I 341
+
Sbjct: 571 L 571
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 19/278 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S ++D G + E++ M+ VP N L++ R+ + A + M
Sbjct: 313 STLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMK 372
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFG 129
+G PN F +S + LC++GK + G+L SG+ ++ Y +I+F+S+ G
Sbjct: 373 NNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQID 432
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKH--FLS 186
A + L EM + T++ IL G R E D M+EK LP+ +L+
Sbjct: 433 EAIELLTEM-KENDCQADTVTFNVILGGLCREGRFDEALD-----MIEK--LPQQGVYLN 484
Query: 187 GNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
Y V+ L+ + A + T +L L KEG +A
Sbjct: 485 KGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALF 544
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
+ + G + + ++++C++ + V LL ++V
Sbjct: 545 DLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDELV 582
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 137/303 (45%), Gaps = 18/303 (5%)
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
+ T+ ++ +R + + + +I ++ E+K H + ++QKL+ K A + +
Sbjct: 130 YITHDVAINLIKREKDPQHALKIFNMVSEQKGF-NHNNATYATILQKLAQFKKFQAVDRV 188
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEG---RVKEA-IQIYHLISERGITVRDSDYYAFVN 263
+ E + + ++K SK G +V +A + I ++ E+ S + +N
Sbjct: 189 LHQMTYEACKFHEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAIS---SCLN 245
Query: 264 VLCKEHQPEEVCGLL----RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD- 318
+L +Q + V LL R +V Y P + V C +G E++ + +
Sbjct: 246 LLVDSNQVDLVRKLLLYAKRSLV---YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNS 302
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK-IEKLKGSLDVATYDVLLDGLFKDGRME 377
K + S+LM+ C N ++ +A L + + K + D TY+VL++G ++G+ +
Sbjct: 303 KYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKAD 362
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A + ++MK + ++ +V LC +L+ A EM G KPD TY +I
Sbjct: 363 RARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLI 422
Query: 437 SGF 439
+ F
Sbjct: 423 NFF 425
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SL +C K + GL + R GFVP + N LL L ++ A+ +V
Sbjct: 494 SLTQNCELRKANKLLGLMLSR-----GFVPHYATSNELLVRLCKEGMANDAATALFDLVD 548
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS 112
G P +W L+ ++CR K V LLD + S+
Sbjct: 549 MGFQPQHDSWELLIDLICRDRKLLYVFELLDELVTSN 585
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 183/452 (40%), Gaps = 28/452 (6%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEV-YRMMRVYGFVPAVSACNALLDALYRQNE 62
S G L ++ Y+ G+ E+ R+ YG +P V+ CN LL L Q
Sbjct: 899 SLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRR 958
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNL 117
A LY M+ + ++ ++ + LC + E L L+++ I V YN+
Sbjct: 959 WDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNV 1018
Query: 118 VIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID Y ++GD G L EM NG P TY S+++ + E +I L +E
Sbjct: 1019 LIDGYCRRGDMGRGLLLLGEMETNG--FLPTLVTYGSLINWLGKKGDLE---KIGSLFLE 1073
Query: 177 KKLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKR----ACDEKIELQDDTCGCMLK 228
+ K S N + VI L + A +I K+ CD I T ++
Sbjct: 1074 MR---KRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDI----ITFNTLIT 1126
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L EG V++A R + Y ++ C + LL +++ RG+ P
Sbjct: 1127 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTP 1186
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + GK E + + ++ + D + L+ C R + A +
Sbjct: 1187 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNIL 1246
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHL 407
++ + D Y L+DG + + +A +IF++M+ V S ++ C
Sbjct: 1247 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQF 1306
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A+ M K+G PDE TY VISG+
Sbjct: 1307 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1338
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 1/220 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L K+G +++ ++ + +RG + Y + ++ LC + +L+ +
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P + + + C +G ++ E L + + L + + L+ +C ++
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIV 400
A L +++ + DV T+ L+ GL G++ EA+ + + M E +V + + ++
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+S LC + L A +EML+ +PDE Y +I GF+
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFI 1269
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 179/431 (41%), Gaps = 11/431 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y +G GL + M GF+P + +L++ L ++ ++ L+ M +
Sbjct: 1017 NVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1076
Query: 76 DGVSPNKFTWSLVAQILC--RSGKFEVVL--GLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G SPN ++ V LC RS +V+ + SG ++ +N +I +G
Sbjct: 1077 RGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 1136
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L E R L P +Y+ ++ G R E SD +V +M + P G
Sbjct: 1137 AEHFLREAIR-RELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM-GRGHTPDVVTFGA- 1193
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L GK A ++ ++ + ++ + ++ L K+ + A I + E+
Sbjct: 1194 -LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1252
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ + Y ++ + + + + +G P + + + C G E
Sbjct: 1253 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEA 1312
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+S + G + D F ++++ Y ++ A+ + K K +V TY L++G
Sbjct: 1313 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLING 1372
Query: 370 LFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K G + A +F M+ E + ++ I++ L ++ +A + ML P+
Sbjct: 1373 YCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1432
Query: 429 EATYKQVISGF 439
+ T +++G
Sbjct: 1433 DVTLHYLVNGL 1443
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/439 (18%), Positives = 165/439 (37%), Gaps = 48/439 (10%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+ + M G P + N L+ L + +R A +R ++PN+ +++ + C
Sbjct: 1105 ILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFC 1164
Query: 94 RSGKFEVVLGLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
G+ V LL D + ++++ LV+ G A + E R
Sbjct: 1165 MRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV-----AGKVSEALI-VREKMTERQ 1218
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--DYVI--QKLSDMG 199
+ P + Y+ ++ G + + I+ M+EK + P F+ D I + L D
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1278
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K + M K C + + +C M+K + G + EAI + + G D +
Sbjct: 1279 KIFEF-MEHKGVCPDIV-----SCNAMIKGYCQFGMMSEAILCMSNMRKVGCI---PDEF 1329
Query: 260 AFVNVLCKEHQPEEVCGLLR---DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ V+ + + G LR D+++R P + S + C G E L + +
Sbjct: 1330 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM 1389
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKA----------------IALHIKIEKLKGSLDV 360
+ L + + L+ ++ +A + LH + L
Sbjct: 1390 QAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPC 1449
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
+ + G+ V + ++ +S++ ++ LC LR+A+ + M
Sbjct: 1450 VINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRM 1509
Query: 421 LKMGHKPDEATYKQVISGF 439
K G+ P+ T+ ++ GF
Sbjct: 1510 AKKGYVPNPITFLSLLYGF 1528
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 118/316 (37%), Gaps = 37/316 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +++ M G P + +CNA++ + + A M + G P++FT++ V
Sbjct: 1276 DARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1335
Query: 90 QILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ G L L I + V Y+ +I+ Y K GD +A M L
Sbjct: 1336 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM-QAEAL 1394
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY+ ++ + +K + GL E LL + S ND + L + G T
Sbjct: 1395 SPNVVTYTILIGSLFKKDKVLRA----GLYFETMLL--NHCSPNDVTLHYLVN-GLTSCT 1447
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ C E+ G+ + L+ + G R+S Y A +
Sbjct: 1448 PCVINSICCNTSEVH--------------GKDALLVVFKKLVFDIG-DPRNSAYNAIIFS 1492
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK---WKEV------EELLSA 315
LC+ + E + ++GY+P + + C GK W+ + +E
Sbjct: 1493 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEI 1552
Query: 316 VLDKGLLLDSFCCSSL 331
+ L D + S+
Sbjct: 1553 IFRYKFLFDQYATESV 1568
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 183/418 (43%), Gaps = 18/418 (4%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
L + + R +R YG P+ ACNA+L L I L ++ N +++
Sbjct: 212 LCLPSAPLLRRLRQYGISPSPEACNAVLSRLPLDEAIEL--------FQELPHKNVCSYN 263
Query: 87 LVAQILCRSGKFEVVLGLLD--SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
++ + LC +G+ + L D + V Y ++I + G+ A L+EM G +
Sbjct: 264 ILLKALCDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAG-GV 322
Query: 145 TPGFSTYSSILDGARRYEKTEVSD--RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
P + Y+S++ A +K +SD R+V MV++K++ L V+ + G
Sbjct: 323 EPNATVYTSVV--ALLCDKGWISDALRVVEDMVQRKVILDEALYTT--VLSGFCNKGDLV 378
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+A F + + T M+ L + ++EA ++ + R + V + Y +
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ CK + E + +V+RG P + + C +G + ELL + +KGL
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
L++ +SL+ C +++A+ ++ DV TY L+D L K G ++ A +
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M + + + ++ ++++ C + K D ML+ P+ ATY ++ +
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQY 616
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 155/380 (40%), Gaps = 16/380 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG D L V M + + +L + ++ A + M R G++ + T
Sbjct: 339 KGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT 398
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + LCR+ + E LL V Y ++ID Y K+G AF N M
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSD 197
R +TP TY+++ DG + + ++ ++ M K L L+ Y +I L
Sbjct: 459 Q-RGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL----ELNACTYNSLINGLCK 513
Query: 198 MGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G Y + + A + L+ D T ++ AL K G + A + + ++GI
Sbjct: 514 AG--YLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTI 571
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N C + E LL ++E+ P A + + C + K E+
Sbjct: 572 VTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKG 631
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ + + + + L++ +C R + +A+ H ++ + L +Y L+ L K +
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKK 691
Query: 376 MEEAVRIFDYMKELKVVSSS 395
EA +F M++ + + S
Sbjct: 692 FVEARELFHDMRKEGLTAES 711
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 146/387 (37%), Gaps = 84/387 (21%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y +G + +++ M G P V AL D L +Q +++ A+ L M
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL--------GLLDSGIYSSVMYNLVIDFYSKKGD 127
G+ N T++ + LC++G E + L +Y+ Y +ID K GD
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYT---YTTLIDALCKSGD 551
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A L EM + + + P TY+ +++G +S R+ G KKLL
Sbjct: 552 LDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFC------MSGRVEG---GKKLL------- 594
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
D++++K I T ++K E +K +IY +
Sbjct: 595 -DWMLEK--------------------NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMR 633
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
R + ++ Y + CK +E +++++G+ A S + K K+
Sbjct: 634 SRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFV 693
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E EL + +GL +S DV YD +
Sbjct: 694 EARELFHDMRKEGLTAES---------------------------------DV--YDFYI 718
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS 394
D F + +E + + D + E +V S
Sbjct: 719 DLNFNEDNLESTLALCDELVEASIVKS 745
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 75 RDGVSPNKFTWS-LVAQILCRSGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
R GV WS L+ ++ + L LLD+G+ +N+++ + G +A
Sbjct: 205 RRGVRVPLPAWSDLMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASAR 264
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ +EM R + P T+++++ G + ++ + GLM + + P +
Sbjct: 265 NMFDEMLR-RGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVY-------- 315
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
T G ++ L K GR+++A++++ + ERG+
Sbjct: 316 -----------------------------TYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ ++ CKE L R++ RG + + C K ++
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ + + GL D ++L++ +C ++D A+ + ++ +LD TY L+ GL K
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466
Query: 373 DGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
GR ++ RI M E + ++++ +V+ C +++ K EM G KP T
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526
Query: 432 YKQVISGF 439
Y V++GF
Sbjct: 527 YNVVMNGF 534
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 144/308 (46%), Gaps = 8/308 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N L+ + + +++ A+ L G M + GV+P+ +T+ Q LC++G+ +
Sbjct: 274 GVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDA 333
Query: 102 LGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ + + G+ ++V++ +ID + K+G+ A + EM R + Y+++ +
Sbjct: 334 VEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMAT-RGIKTDLVAYNALAN 392
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G R + ++ IV M L P +I G+ A + + DE +
Sbjct: 393 GLCRVRDLKAANDIVEEMRNNGLKPDKVTYTT--LIDGFCKEGELDMAMEMKQEMSDEGV 450
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L + T ++ LSK GR ++ +I + E G+ ++ Y ++ CK +
Sbjct: 451 ALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFK 510
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL+++ +G P + + + C G+ K + LL+A+L+ G+ D + L++ +C
Sbjct: 511 LLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHC 570
Query: 337 SNRQIDKA 344
+ ++ A
Sbjct: 571 KHGKVRDA 578
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 11/267 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + ++D + +G GLE++R M G + A NAL + L R +++ A
Sbjct: 344 GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGI-YSSVMYNLVIDF 121
+ + M +G+ P+K T++ + C+ G+ ++ + + D G+ V Y +I
Sbjct: 404 NDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
SK G + L EM L P +TY+ ++D + + +++ M K P
Sbjct: 464 LSKSGRSVDSERILCEMMEA-GLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKP 522
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + V+ +G+ A+M+ + + D T +L K G+V++A +
Sbjct: 523 G--VVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEE 580
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKE 268
L S +G+ Y + +N K+
Sbjct: 581 ---LKSAKGMVSDFGLYTSLINEFVKK 604
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 131/321 (40%), Gaps = 48/321 (14%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D +E++ MR G P L+DA ++ + L+ M G+ + +
Sbjct: 328 GRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAY 387
Query: 86 SLVAQILCR----SGKFEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ +A LCR ++V + ++G+ V Y +ID + K+G+ A + EM +
Sbjct: 388 NALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSD 447
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ TY++++ G + ++ S+RI+ M+E L P +
Sbjct: 448 -EGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDN----------------T 490
Query: 201 TYAAEM-IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
TY + F + D K + +LK + +GR K + Y+++
Sbjct: 491 TYTMVIDAFCKNSDVKTGFK------LLKEMQNKGR-KPGVVTYNVV------------- 530
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N C Q + LL ++ G P + + + C GK ++ EEL SA K
Sbjct: 531 --MNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSA---K 585
Query: 320 GLLLDSFCCSSLMEYYCSNRQ 340
G++ D +SL+ + +
Sbjct: 586 GMVSDFGLYTSLINEFVKKKS 606
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/444 (18%), Positives = 183/444 (41%), Gaps = 44/444 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++++C G ++ + ++D Y GL D V M + + A N L+ AL +
Sbjct: 118 VVEAC-GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCER 176
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMY 115
+ A + M+ G +P+ T++++ Q C+ + L L+D ++V Y
Sbjct: 177 GRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTY 236
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N++ID ++GD A + LN + R P Y+++L G E+ +D I+ MV
Sbjct: 237 NVIIDAMCREGDVDQARELLNSL-PSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMV 295
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ P + T ++ L ++G
Sbjct: 296 RENCPP-------------------------------------NEATLNVIINTLCRKGL 318
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+++ +S+ G T Y A ++ +C++ + LL ++ G P + +
Sbjct: 319 LQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNT 378
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C +W++ EEL+ + L D+ ++++ ++C I +A + ++ +
Sbjct: 379 VLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKG 438
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
+ + TY ++ GL K G+ME+A+ + + M + + ++ L ++ + ++
Sbjct: 439 CNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQ 498
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
++ G P Y V+ G
Sbjct: 499 VVHKLQDSGISPQTVLYNTVLLGL 522
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 39/182 (21%)
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDK------GLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
+R V C +G+ + ++ A + G L+D +C + L+E R++ +
Sbjct: 100 NRLVRDLCRRGRPADAARVVEACGPEATAATYGALVDGYCRAGLLE---DARRVVGGMPA 156
Query: 348 HIKIEK-----------------------LKGSL------DVATYDVLLDGLFKDGRMEE 378
H++ L G L DV TY++LL K +
Sbjct: 157 HVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQ 216
Query: 379 AVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ + D+M+ E ++ ++ +++ +C ++ +A + + + G KP+ Y V+
Sbjct: 217 ALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLK 276
Query: 438 GF 439
GF
Sbjct: 277 GF 278
>gi|414587959|tpg|DAA38530.1| TPA: hypothetical protein ZEAMMB73_367044 [Zea mays]
Length = 537
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 172/380 (45%), Gaps = 23/380 (6%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R + P+ + N +L L R + A LY M+RD V P FT+ +VA+ LCR G
Sbjct: 1 MPRRFAVAPSFRSYNIVLSTLARADCHADALLLYRRMLRDHVPPTTFTFGVVARALCRLG 60
Query: 97 KFEVVL----GLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLTPG 147
+ L G+ G + +V+Y +VI +G A L+EM C T
Sbjct: 61 RAGDALARLRGMARHGCVPDAVLYQIVIHALVVQGRVAEATMLLDEMLLMGCAADVNT-- 118
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
F+ L G RR + + R+V M+ + +P G +++Q L + A +
Sbjct: 119 FNDLVLRLCGLRRVRE---AARLVDRMMTQGCMPSAMTYG--FLLQGLCRTRQADEACTL 173
Query: 208 FKRACDEKIELQDDT-CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
R + + + + CGC++ EG++ ++Y ++ +G Y ++ LC
Sbjct: 174 LGRLPEVNVVMLNTVICGCLM-----EGKLARVTKLYEMMGSKGCPSDVHTYSILMHGLC 228
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + +L + E P M S + S C G W + +L +L KG ++S
Sbjct: 229 KLGRFGSGVRMLDKMEENSCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 288
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ ++ C + ++D+A L +++ D+ TY+ L+ L K+G ++ ++ + + M
Sbjct: 289 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEM 348
Query: 387 KELKVVSSS-SFVIVVSRLC 405
+ ++ S+ ++++ LC
Sbjct: 349 VTKGIKPNNFSYNMLINELC 368
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
RV+EA ++ + +G Y + LC+ Q +E C LL + E + L+
Sbjct: 131 RVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTLLGRLPEVNVV----MLN 186
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ +GK V +L + KG D S LM C + + + K+E+
Sbjct: 187 TVICGCLMEGKLARVTKLYEMMGSKGCPSDVHTYSILMHGLCKLGRFGSGVRMLDKMEEN 246
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKA 413
+ ++ TY LL ++G ++A + D M ++S + ++ LC +L +A
Sbjct: 247 SCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQA 306
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ EM G KPD TY +I
Sbjct: 307 TRLVQEMKSQGCKPDICTYNGLIKAL 332
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A ++++R + + T G + +AL + GR +A+ ++ G Y ++
Sbjct: 30 ALLLYRRMLRDHVPPTTFTFGVVARALCRLGRAGDALARLRGMARHGCVPDAVLYQIVIH 89
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF---VASQCGKGKWKEVEELLSAVLDKG 320
L + + E LL +++ G CA +++ F V CG + +E L+ ++ +G
Sbjct: 90 ALVVQGRVAEATMLLDEMLLMG---CAADVNTFNDLVLRLCGLRRVREAARLVDRMMTQG 146
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + L++ C RQ D+A L ++ ++ +V + ++ G +G++
Sbjct: 147 CMPSAMTYGFLLQGLCRTRQADEACTLLGRLPEV----NVVMLNTVICGCLMEGKLARVT 202
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++++ M S ++ I++ LC L ++ D+M + P+ TY ++ F
Sbjct: 203 KLYEMMGSKGCPSDVHTYSILMHGLCKLGRFGSGVRMLDKMEENSCAPNIMTYSTLLHSF 262
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 105/271 (38%), Gaps = 8/271 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + G V+ N L+ L +R A+ L M+ G P+ T+ + Q LCR+ +
Sbjct: 107 MLLMGCAADVNTFNDLVLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQ 166
Query: 98 FE---VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+ +LG L + VM N VI +G A +L EM + TYS +
Sbjct: 167 ADEACTLLGRLPE--VNVVMLNTVICGCLMEGKL-ARVTKLYEMMGSKGCPSDVHTYSIL 223
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
+ G + + R++ M E P + ++ G A + + +
Sbjct: 224 MHGLCKLGRFGSGVRMLDKMEENSCAPN--IMTYSTLLHSFCRNGMWDDARAMLDQMLAK 281
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ ++ AL K+G++ +A ++ + +G Y + LCKE +
Sbjct: 282 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWS 341
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
LL ++V +G P + + C G
Sbjct: 342 MALLEEMVTKGIKPNNFSYNMLINELCKAGN 372
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 26 GLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
G M+G ++Y MM G V + L+ L + + M + +P
Sbjct: 191 GCLMEGKLARVTKLYEMMGSKGCPSDVHTYSILMHGLCKLGRFGSGVRMLDKMEENSCAP 250
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRL 135
N T+S + CR+G ++ +LD + +S YN +I K G A +
Sbjct: 251 NIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLV 310
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
EM + P TY+ ++ + + S ++ MV K + P +F
Sbjct: 311 QEM-KSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEMVTKGIKPNNF 358
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 181/437 (41%), Gaps = 17/437 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++ L+ G ++++R R VP +L+ L + ++ A L M
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFG 129
G+ P + V + LC++G+F LG + + + +N+++D K G
Sbjct: 58 DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF M P TY+++++G + K + + ++ LM E P
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITY--S 175
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L G+T + + + +L L K R+ EA+++ L+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + + + C+ Q + L++ + ERG P + + +A C + +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK------GSLDVATY 363
+ LL ++ + D S++++ C + ++D L E L+ + TY
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
V+++GL + + ++A+ + M + +VV SSF +V+ LC +L A K M +
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Query: 423 MGHKPDEATYKQVISGF 439
KP+ Y +I G
Sbjct: 416 RECKPNPVAYAALIDGL 432
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 190/429 (44%), Gaps = 21/429 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM-VRDGVSPNKFT 84
G F D L ++ + P + N L+DAL + + A ++ +M PN T
Sbjct: 79 GRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138
Query: 85 WSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V LC+ GK + + LLD +G +V+ Y+++++ K G F L EM
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSD 197
R P Y+++L+G + + + + +V LM+ P ++ N + +
Sbjct: 199 R-RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT-VVTYNSLMELFCRSKQ 256
Query: 198 MGKTYA-AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ + + +++ +R C + + +T ++ L ++ R+ +A + +
Sbjct: 257 VDRAFRLIQVMSERGCPPDV-INYNT---VIAGLCRDARLDDAQALLKQMVAARCVPDVI 312
Query: 257 DYYAFVNVLCKEHQP------EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y ++ LCK+ + E C +L + + G P A + + C K ++
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LL ++D ++ D S ++ C + +D A + + + + + Y L+DGL
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K G +++AVR+F+ M E +++ V+ LC + + +A++ + M+ PD A
Sbjct: 433 SKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 431 TYKQVISGF 439
+Y +I G
Sbjct: 493 SYGALIRGL 501
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 155/360 (43%), Gaps = 15/360 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G + + M GF P V N LL+ L + + A L M+R G P T++ + +
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 91 ILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ CRS + F ++ + + G V+ YN VI + A L +M R
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR-CV 308
Query: 146 PGFSTYSSILDG-ARRYE-----KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P TYS+I+DG + + K E + I+ +M + P VI+ L
Sbjct: 309 PDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA--VVIEGLCRAR 366
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K+ A + +R D ++ + ++ +L K + A +I+ ++SER Y
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A ++ L K + ++ + +VE + P + + CG G+ +E ++ ++ K
Sbjct: 427 ALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
D +L+ C +++A L +E +++V Y+VL++ L K R+ +A
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 137/332 (41%), Gaps = 13/332 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ LE+ ++M G P V N+L++ R ++ A L M G P+ ++ V
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFD-----RLNEMC 139
LCR + + LL + + + Y+ +ID K A + + EM
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P TY+ +++G R K++ + ++ M++ +++P LS VI L
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD--LSSFSMVIGSLCKSH 401
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA IF + + + ++ LSK G V +A++++ L+ E + Y
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYN 460
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ ++ LC + EE ++ ++ + P + C +E EL AV K
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
G ++ + L+ C +++ A + K+
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL-----ASC-LYGAMVRDGVSPNKF 83
D + + M VP V + ++D L + + A+C + M + G PN
Sbjct: 294 DAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAG 353
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEM 138
T+++V + LCR+ K + L LL I S V+ +++VI K D AA+ ++ M
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY-KIFGM 412
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ R P Y++++DG + + + + R+ LMVE + ++ + V+ L +
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF---RPGVATYNSVLDGLCGV 469
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ A + + ++ + G +++ L + V+EA +++ + +G + Y
Sbjct: 470 GRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVY 529
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGY 286
VN LCK+ + + G+ ++E GY
Sbjct: 530 NVLVNELCKKKRLSDAHGVANKLIEAGY 557
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 202/482 (41%), Gaps = 51/482 (10%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
++SC G + + L +++ + GL EV+ + G P+ + NA++ A R
Sbjct: 136 VRSC-GCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAG 194
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YN 116
+ A + M DG P+ FT++ + +CR G + L L+ +GI +V+ Y
Sbjct: 195 AVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYT 254
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+++D + A L M + ++ +TY S++ GA R + E + R++ +E
Sbjct: 255 MLVDGFCNASRVEEAVCVLERM-KEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIE 313
Query: 177 K----------KLLPKHFLSGNDY------VIQKLSD----MGKTYAAEMIFKRACDEKI 216
LL + LS ND + +K+S +G T + +I C K+
Sbjct: 314 SDPTLHSIAYHTLL--YCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVI---PCAVKV 368
Query: 217 ELQDDTCGCMLKALSKEGR------------------VKEAIQIYHLISERGITVRDSDY 258
D C + + K G + +A + + + G+ Y
Sbjct: 369 LESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESY 428
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ K + E ++ + E G+ P + + + G + + L V++
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
GL+ D +SL++ C Q+D A ++ + +V TY+VL+ GL G + +
Sbjct: 489 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 548
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ + + MK + + SF + C ++++ KA K ++M + G PD TY +I
Sbjct: 549 AIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIK 608
Query: 438 GF 439
Sbjct: 609 AL 610
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 173/441 (39%), Gaps = 50/441 (11%)
Query: 20 DCYSH---------KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
DC+++ +G+ + L + + M G P V L+D + + A C+
Sbjct: 214 DCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVL 273
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKK 125
M GVS + T+ + R + E +L I S S+ Y+ ++ + K
Sbjct: 274 ERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLL-YCLSK 332
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT----EVSDRIVG--------- 172
D L + + R G +T+S ++ A + ++ E+ D +
Sbjct: 333 NDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDM 392
Query: 173 -LMVEKKLLP-KHFLSGNDYVIQKLSD-----------MGKTYAAEMIFKRACDEKIELQ 219
+M+ K L K N Y Q +SD + +A +RA + +Q
Sbjct: 393 YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452
Query: 220 DD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T ++ K G V +A ++ E G+ + + ++ LC HQ +
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 512
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ ++ E G P + + C G + ELL+ + G+ D++ ++ +
Sbjct: 513 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 572
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+C R+I+KA L + + S D TY+ L+ L + R++EA I M+ + +
Sbjct: 573 LSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCI 632
Query: 393 SSS--SFVIVVSRLCHLKELR 411
+ ++ VV L + R
Sbjct: 633 GTKQHTYWPVVGALTKMGRFR 653
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 105/238 (44%), Gaps = 9/238 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S ++ ++V+DC++ G LE ++M+ GF P + N L++ + +
Sbjct: 419 DGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHD 478
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVID 120
A ++ G+ P+ T++ + LC + + F + + G+ +V YN++I
Sbjct: 479 AKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIH 538
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G A + LN+M +TP ++++ + R K E + ++ M +
Sbjct: 539 GLCSAGHVSKAIELLNKM-KMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 597
Query: 181 PKHFLSGNDYVIQKLSDMGKT-YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P + + +I+ L D + A E+I I + T ++ AL+K GR +
Sbjct: 598 PDSYTY--NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFR 653
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 160/397 (40%), Gaps = 48/397 (12%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDS 107
AL DAL R+ + L++ L + G ++ + + R G EV + +
Sbjct: 115 ALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRL 174
Query: 108 GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
G+ S+ +YN VI + G AA+ R +M P TY++++ G R +
Sbjct: 175 GLRPSTAIYNAVIAASVRAGAVDAAYLRFQQM-PADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ R+V M + P V+ TY L D C
Sbjct: 234 ALRLVKQMERAGIRPN--------VV--------TYTM-------------LVDGFC--- 261
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
RV+EA+ + + E+G++ ++ Y + V+ + + E +L + +E
Sbjct: 262 -----NASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDP 316
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
++ + KE EL + +G LL S S ++ C+ + ++ +
Sbjct: 317 TLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIP--CAVKVLESSDL 374
Query: 347 LHIKIEKLK--GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+ + +K G+L Y +++ + + +A + F M ++SS S+ IV+
Sbjct: 375 CELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDC 434
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
E+ +A++ M + G P+ T+ +I+G++
Sbjct: 435 FAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYL 471
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 171/419 (40%), Gaps = 47/419 (11%)
Query: 30 DGLEVYRMMRVYG---FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ LE+ MM G P V ++D L + + A ++ M+ GV PN T++
Sbjct: 182 EALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYT 241
Query: 87 LVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+ +GK++ V+ +L G+ V+Y +++D+ K G A + + +
Sbjct: 242 CLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIR- 300
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ + P + Y +L G + LMV + P H
Sbjct: 301 KGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHH----------------- 343
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
IF M A +K+ + EA+ I+ + ++ ++ +Y A
Sbjct: 344 -----IFN---------------IMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGAL 383
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LCK + ++ ++ G P S V C KW++ E+L VLD+G+
Sbjct: 384 IDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGI 443
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
L++ + LM C ++ +A L + ++ DV +Y+ L+DG GR++EA +
Sbjct: 444 RLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAK 503
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ D M + + ++ ++ C + + A EML G P TY ++ G
Sbjct: 504 LLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/418 (18%), Positives = 172/418 (41%), Gaps = 43/418 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + ++ Y G + + +++ + M +G P LLD L +
Sbjct: 231 KGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTE 290
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVID 120
A ++ +++R G+ P+ + ++ G + LD + + V ++N++ +
Sbjct: 291 ARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFN 350
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y+KK A ++M + L+PG Y +++D + + + + M+ + +
Sbjct: 351 AYAKKAMIDEAMHIFDKM-RQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVT 409
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F+ + ++ L + K AE +F D+ I L ++ L +EGRV EA
Sbjct: 410 PDIFVFSS--LVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQ 467
Query: 241 QIY---------------------HLISER--------------GITVRDSDYYAFVNVL 265
++ H ++ R G+ + Y ++
Sbjct: 468 RLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGY 527
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK + ++ L R+++ +G P + + + G++ E +EL +++ D
Sbjct: 528 CKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDI 587
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ + ++ C N +D+A + + LD+ T ++++ L K GR E+A+ +F
Sbjct: 588 YTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLF 645
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 176/418 (42%), Gaps = 52/418 (12%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G +++ + Y+ K + + + ++ MR P V AL+DAL + +
Sbjct: 336 NGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDD 395
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVID 120
A + M+ +GV+P+ F +S + LC K+E + +LD GI ++ +N+++
Sbjct: 396 AVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMC 455
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
++G A RL ++ ++ P +Y++++DG + + + +++ +MV L
Sbjct: 456 NLCREGRVMEA-QRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLK 514
Query: 181 PKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P F + Y + D + EM+ K + T +L L + GR
Sbjct: 515 PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVV-----TYNTILHGLFQIGRFC 569
Query: 238 EAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA ++Y ++I+ R R D Y + +L GL R+ F
Sbjct: 570 EAKELYLNMINNR----RKCDIYTYTIILN---------GLCRN--------------NF 602
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
V E ++ ++ K L LD F + ++ + + A+ L I
Sbjct: 603 V---------DEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGL 653
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR-LCHLKELRKA 413
DV TY ++ + L K+G +EE +F M+E +S + + R L H ++ +A
Sbjct: 654 VPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 119/298 (39%), Gaps = 24/298 (8%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N L+ L R+ + A L M+R V P+ +++ + C +G+ + LLD +
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510
Query: 111 -----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
YN ++ Y K A+ EM + LTPG TY++IL G +
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLM-KGLTPGVVTYNTILHGLFQ----- 564
Query: 166 VSDRIVGLMVEKKLLPKHFLSGN--------DYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+G E K L + ++ ++ L A +F+ C + ++
Sbjct: 565 -----IGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQ 619
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
L T M+ AL K GR ++A+ ++ IS G+ Y L KE EE+ L
Sbjct: 620 LDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDEL 679
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+ E G P + L+ V +G LS + +K L++ S L+ Y
Sbjct: 680 FSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIY 737
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD-SFCCSSLMEYYCSNRQIDKAIA 346
P + + + C G+ K +L G L+ + L++ C +++D+A
Sbjct: 90 PSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATD 149
Query: 347 LHIK-IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVV 401
+ ++ + + +L+V +Y++LL GL + R EEA+ + M + + ++ V+
Sbjct: 150 ILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LC + + +A M+ G +P+ TY +I G++
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYL 248
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 178/422 (42%), Gaps = 20/422 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G L+ M+V G P + N+L+ N I A L + G P+K ++
Sbjct: 284 GKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSY 343
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
V LC+ K E V L++ +++S V YN +I SK G A L E
Sbjct: 344 YTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQ 403
Query: 140 NGRNLTPGFST----YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+ GF YS+I+ + + + + +V M + P + ++
Sbjct: 404 D-----KGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPD--VVTYTAIVDGF 456
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+G+ A+ I ++ + + +L L G+ EA ++ ++ E T
Sbjct: 457 CRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 516
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y A ++ L +E + E C L R++VE+G+ P +E++ + S C K E ++ L
Sbjct: 517 ITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 576
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
L+KG ++ ++++ +C ++ A+++ + D TY L D L K GR
Sbjct: 577 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGR 636
Query: 376 MEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
++EA + M + + ++ V+ R + + ++MLK +P Y Q
Sbjct: 637 LDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLK--RQPFRTVYNQ 694
Query: 435 VI 436
VI
Sbjct: 695 VI 696
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 38/331 (11%)
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
+ V+Y ++D SK A R+ + R + + ++ R K + R
Sbjct: 198 HHPVVYYTMLDVLSKTKLCQGA-RRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALR 256
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
++ LM + + P LS + I L GK A +R I+ T ++K
Sbjct: 257 VLTLMQKAGVEPS--LSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKG 314
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV-CGLLRDVVERGYIP 288
R+++A+++ + +G YY + LCKE + EEV C + + V IP
Sbjct: 315 YCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIP 374
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + G + L DKG +D S+++ +C ++D+A +L
Sbjct: 375 DQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 434
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK 408
I + + DV TY ++DG + GR++EA +I
Sbjct: 435 IDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQ------------------------ 470
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+M K G KP+ +Y +++G
Sbjct: 471 ----------QMYKHGCKPNTVSYTALLNGL 491
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 166/399 (41%), Gaps = 18/399 (4%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGV--SPNKFTWSLVAQILCRSGKFEVVLGLLD--- 106
+LD L + + A + M R G+ P F + +V+ R+GK L +L
Sbjct: 205 TMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVS--YSRAGKLRNALRVLTLMQ 262
Query: 107 -SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+G+ S+ + N I K G A L M + P TY+S++ G +
Sbjct: 263 KAGVEPSLSICNTTIYVLVKGGKLEKALKFLERM-QVTGIKPDIVTYNSLIKGYCDLNRI 321
Query: 165 EVSDRIVGLMVEKKLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
E + ++ + K P ++ +K + K +M++ + +
Sbjct: 322 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVW----NSNLIPDQV 377
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ LSK G +A+ ++G + Y A V+ C++ + +E L+ D+
Sbjct: 378 TYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM 437
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
RG P + + V C G+ E +++L + G ++ ++L+ C + +
Sbjct: 438 YSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKS 497
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IV 400
+A + E+ + + TY ++ GL ++G++ EA + M E + + ++
Sbjct: 498 LEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLL 557
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC +++ +A K +E L G + + VI GF
Sbjct: 558 IQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 596
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 10/233 (4%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G + ++ R M GF P N L+ +L + ++ A + G + N
Sbjct: 529 EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVN 588
Query: 85 WSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V C+ G E L +LD SG + +V Y + D KKG A + + +M
Sbjct: 589 FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKML 648
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ + L P TY S++ RY + D ++ L+ EK L + F + + VI+KL D G
Sbjct: 649 S-KGLDPTPVTYRSVI---HRYSQWGRVDDMLNLL-EKMLKRQPFRTVYNQVIEKLCDFG 703
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
AE + + ++ +TC ++++ K+G A ++ + R +T
Sbjct: 704 NLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLT 756
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 181/437 (41%), Gaps = 17/437 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++ L+ G ++++R R VP +L+ L + ++ A L M
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFG 129
G+ P + V + LC++G+F LG + + + +N+++D K G
Sbjct: 58 DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF M P TY+++++G + K + + ++ LM E P
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITY--S 175
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L G+T + + + +L L K R+ EA+++ L+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + + + C+ Q + L++ + ERG P + + +A C + +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK------GSLDVATY 363
+ LL ++ + D S++++ C + ++D L E L+ + TY
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
V+++GL + + ++A+ + M + +VV SSF +V+ LC +L A K M +
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Query: 423 MGHKPDEATYKQVISGF 439
KP+ Y +I G
Sbjct: 416 RECKPNPVAYAALIDGL 432
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 190/429 (44%), Gaps = 21/429 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM-VRDGVSPNKFT 84
G F D L ++ + P + N L+DAL + + A ++ +M PN T
Sbjct: 79 GRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138
Query: 85 WSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V LC+ GK + + LLD +G +V+ Y+++++ K G F L EM
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSD 197
R P Y+++L+G + + + + +V LM+ P ++ N + +
Sbjct: 199 R-RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT-VVTYNSLMELFCRSKQ 256
Query: 198 MGKTYA-AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ + + +++ +R C + + +T ++ L ++ R+ +A + +
Sbjct: 257 VDRAFRLIQVMSERGCPPDV-INYNT---VIAGLCRDARLDDAQALLKQMVAARCVPDVI 312
Query: 257 DYYAFVNVLCKEHQP------EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y ++ LCK+ + E C +L + + G P A + + C K ++
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LL ++D ++ D S ++ C + +D A + + + + + Y L+DGL
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K G +++AVR+F+ M E +++ V+ LC + + +A++ + M+ PD A
Sbjct: 433 SKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 431 TYKQVISGF 439
+Y +I G
Sbjct: 493 SYGALIRGL 501
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 155/360 (43%), Gaps = 15/360 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G + + M GF P V N LL+ L + + A L M+R G P T++ + +
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 91 ILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ CRS + F ++ + + G V+ YN VI + A L +M R
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR-CV 308
Query: 146 PGFSTYSSILDG-ARRYE-----KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P TYS+I+DG + + K E + I+ +M + P VI+ L
Sbjct: 309 PDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA--VVIEGLCRAR 366
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K+ A + +R D ++ + ++ +L K + A +I+ ++SER Y
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A ++ L K + ++ + +VE + P + + CG G+ +E ++ ++ K
Sbjct: 427 ALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
D +L+ C +++A L +E +++V Y+VL++ L K R+ +A
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 137/332 (41%), Gaps = 13/332 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ LE+ ++M G P V N+L++ R ++ A L M G P+ ++ V
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
Query: 90 QILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFD-----RLNEMC 139
LCR + + LL + + + Y+ +ID K A + + EM
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
P TY+ +++G R K++ + ++ M++ +++P LS VI L
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD--LSSFSMVIGSLCKSH 401
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA IF + + + ++ LSK G V +A++++ L+ E + Y
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYN 460
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ ++ LC + EE ++ ++ + P + C +E EL AV K
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
G ++ + L+ C +++ A + K+
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL-----ASC-LYGAMVRDGVSPNKF 83
D + + M VP V + ++D L + + A+C + M + G PN
Sbjct: 294 DAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAG 353
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEM 138
T+++V + LCR+ K + L LL I S V+ +++VI K D AA+ ++ M
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY-KIFGM 412
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ R P Y++++DG + + + + R+ LMVE + ++ + V+ L +
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF---RPGVATYNSVLDGLCGV 469
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ A + + ++ + G +++ L + V+EA +++ + +G + Y
Sbjct: 470 GRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVY 529
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGY 286
VN LCK+ + + G+ ++E GY
Sbjct: 530 NVLVNELCKKKRLSDAHGVANKLIEAGY 557
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 202/509 (39%), Gaps = 101/509 (19%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ LE++ M+ G P V L+ A + A + MV +G+ PN +T++++
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337
Query: 90 QILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKG---DFGAAFD--RLNEMC 139
C+ GK E++ +L+ G+ SSV+ +N +ID Y K+G D D +LN++C
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC 397
Query: 140 -NGRN----------------------------LTPGFSTYSSILDGARRYEKTEVSDRI 170
N R L+P TY++++ G + + + R+
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457
Query: 171 VGLMVEKKLLP------------------------------KHFLSGNDYVIQKLSD--- 197
LM++ +P KH N+++ L D
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH-AEANEFLYTALIDGYC 516
Query: 198 -MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
K A ++FKR E T +L L KEG+V++A+ + ++ +
Sbjct: 517 KAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + + +E + L ++ G P + + F+ + C +G+ E EE++ +
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKI 636
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL------ 370
++G+LLDSF L+ Y Q+D A + I++ TY +LL L
Sbjct: 637 KEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYN 696
Query: 371 --------------------FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
+K E +F+ M E V + +++ ++ LC ++
Sbjct: 697 KEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
L A + + M + G P E + ++S
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSS 785
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 184/439 (41%), Gaps = 17/439 (3%)
Query: 8 RDSQSDALSLVLDCYS-HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
R +++ S++ C S H+ F V ++ + F +V++ N L L R I
Sbjct: 120 RAAENVRNSMIKSCVSSHEARF-----VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDEL 174
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDSGI-YSSVMYNLVIDF 121
+CL+ M+ DGV PN +++ + C+ G V GL+ G S Y +I
Sbjct: 175 NCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILG 234
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y K + G A+ ++ E+ +Y++++ G K + + + M E P
Sbjct: 235 YCKIHELGDAY-KVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFP 293
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ ++ ++GK A F+ + IE T ++ K G++ E ++
Sbjct: 294 D--VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGME 351
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + E+G+ + A ++ CK E+ +L + P + + + C
Sbjct: 352 MLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFC 411
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
K LL+ + + L + ++L+ C R +D A LH + K D
Sbjct: 412 RKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQR 471
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDE 419
T+ +D L K G++E+A ++F+ +KE K ++ F+ ++ C ++ A
Sbjct: 472 TFCAFIDCLCKMGKVEQAHQVFESLKE-KHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530
Query: 420 MLKMGHKPDEATYKQVISG 438
ML G P+ T+ ++ G
Sbjct: 531 MLFEGCFPNSITFNVLLDG 549
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 177/417 (42%), Gaps = 46/417 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +V+ +M G + + L+ +I A L+ M DG P+ T++++
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLV 302
Query: 90 QILCRSGKFEVVLG----LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C GK L ++++GI +V Y ++ID++ K G + L+ M + L
Sbjct: 303 AAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLE-KGL 361
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+++++DG + E + ++ M K+ P +TY
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN----------------SRTYN- 404
Query: 205 EMIFKRACDEKIELQDDTCG-CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
E+I CG C K++ + A+ + + + E ++ Y ++
Sbjct: 405 ELI---------------CGFCRKKSMDR------AMALLNKMYENKLSPNLVTYNTLIH 443
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LCK + L +++ G++P F+ C GK ++ ++ ++ +K
Sbjct: 444 GLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEA 503
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ F ++L++ YC + A L ++ + T++VLLDGL K+G++E+A+ +
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
D M + + ++ I++ + + +A D+M+ G +P+ TY I +
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAY 620
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 168/415 (40%), Gaps = 48/415 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + N L+ L + + A L+ M++DG P++ T+ LC+ GK E +
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492
Query: 105 LDS-----GIYSSVMYNLVIDFYSKKGDFGAA---FDR-LNEMCNGRNLTPGFSTYSSIL 155
+S + +Y +ID Y K F A F R L E C P T++ +L
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC-----FPNSITFNVLL 547
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
DG R+ K E + +V +M K K + +I+++ A M +
Sbjct: 548 DGLRKEGKVEDAMSLVDVM--GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T +KA ++GR+ EA ++ I E GI + Y VN Q +
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
G+L + + G P S + + KE GL L+S
Sbjct: 666 GVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKE---------GMGLDLNS---------- 706
Query: 336 CSNRQIDKAIALHIK--------IEKL--KGSL-DVATYDVLLDGLFKDGRMEEAVRIFD 384
+N +D A I EK+ +G + +V TY L+ GL K + A R+F+
Sbjct: 707 -TNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFN 765
Query: 385 YMKELKVVSSSSF-VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+MKE + S + ++S C L +A++ D M++ H +YK ++ G
Sbjct: 766 HMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCG 820
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 162/390 (41%), Gaps = 56/390 (14%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S +++LD +G D + + +M + P V L++ + R+++
Sbjct: 534 EGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDR 593
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIY-SSVMYNLVID 120
A+ M+ G PN T++ + CR G+ E+V+ + + GI S +Y+++++
Sbjct: 594 ANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA--RRYEKTEVSDRIVGLMVEKK 178
Y G +AF L M + P TYS +L +Y K G+ ++
Sbjct: 654 AYGCIGQLDSAFGVLIRMFD-TGCEPSRQTYSILLKHLIFEKYNKE-------GMGLD-- 703
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L +S ++ I K++D M+F++ ++ +T ++K L K +
Sbjct: 704 -LNSTNISVDNANIWKIADFE---IITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSL 759
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++++ + E GI+ ++ + + ++ CK EE LL ++E ++ V
Sbjct: 760 AFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVC 819
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+G ++ EE+ ++L G +
Sbjct: 820 GLFEQGNQEKAEEIFRSLLSCGY-----------------------------------NY 844
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
D + VLLDGL + G ++E ++ D M++
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 186/423 (43%), Gaps = 48/423 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + E+ + M G P V L+DAL ++ A ++ M P++ T+
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 86 SLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + V D + V + +++D K G+FG AFD L+ M
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM-R 390
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV--IQKLSDM 198
+ + P TY++++ G R + + + + G M + P + Y+ I
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY----TYIVFIDYYGKS 446
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G + +A F++ + I C L +L+K GR +EA QI++ + + G+ V DS
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL-VPDSVT 505
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
Y N++ K C ++ G+ E +LLS +++
Sbjct: 506 Y---NMMMK---------------------CYSKV----------GEIDEAIKLLSEMME 531
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
G D +SL+ ++D+A + ++++++K V TY+ LL GL K+G+++E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ +F+ M + ++ +F + LC E+ A+K +M+ MG PD TY +I
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 438 GFM 440
G +
Sbjct: 652 GLV 654
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 200/441 (45%), Gaps = 28/441 (6%)
Query: 15 LSLVLDCYSHKGLF---------MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
VL+ YS+ GL + +EVYR M + GF P++ ++L+ L ++ +I
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVID 120
L M G+ PN +T+++ ++L R+GK +E++ + D G V+ Y ++ID
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
A + +M GR+ P TY ++LD R+ D + E +
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLD---RFSDNRDLDSVKQFWSEMEK- 356
Query: 181 PKHFLSGNDYVIQ-----KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
H + I K + G+ + + + D+ I T ++ L + R
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR---DQGILPNLHTYNTLICGLLRVHR 413
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ +A++++ + G+ Y F++ K + +G P + +
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ S G+ +E +++ + D GL+ DS + +M+ Y +ID+AI L ++ +
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
DV + L++ L+K R++EA ++F MKE+K+ + ++ +++ L ++++A+
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 415 KNHDEMLKMGHKPDEATYKQV 435
+ + M++ G P+ T+ +
Sbjct: 594 ELFEGMVQKGCPPNTITFNTL 614
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 153/386 (39%), Gaps = 47/386 (12%)
Query: 59 RQNEIRLASCLYGAMVRD-GVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV 113
+ N + A L+ +D GV P T++L+ L + E V L + +G V
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 114 -MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
YN ++D Y K G F+ EM ST+ E ++ IV
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEM----------STHEC--------EANTITHNIV- 861
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTY-AAEMIFKRACDEKIELQDDTCGCMLKALS 231
I L G A ++ + D T G ++ LS
Sbjct: 862 -------------------ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K GR+ EA Q++ + + G + Y +N K + + C L + +V+ G P
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
S V C G+ E + + GL D C + ++ + ++++A+ L ++
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 352 EKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ +G + D+ TY+ L+ L G +EEA +I++ ++ + + +F ++ +
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQV 435
A + M+ G P+ TY+Q+
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D S G + +++ M YG P + N L++ + E A L+ MV++G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
V P+ T+S++ LC G+ + L L +SG+ V+ YNL+I+ K A
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 133 DRLNEMCNGRNLTPGFSTYSSIL 155
NEM R +TP TY+S++
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLI 1039
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 145/369 (39%), Gaps = 34/369 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++++D G F + + +MR G +P + N L+ L R + + A L+G M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
GV P +T Y + ID+Y K GD +A +
Sbjct: 425 ESLGVKPTAYT------------------------------YIVFIDYYGKSGDSVSALE 454
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+M + + P ++ L + + + +I + + L+P + +++
Sbjct: 455 TFEKM-KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY--NMMMK 511
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
S +G+ A + + E ++ L K RV EA +++ + E +
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y + L K + +E L +V++G P + + C + ++L
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++D G + D F ++++ N Q+ +A+ +++KL D T LL G+ K
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKA 690
Query: 374 GRMEEAVRI 382
+E+A +I
Sbjct: 691 SLIEDAYKI 699
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 4/275 (1%)
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR-ACDEKIELQDDTCGC 225
S G M+ K P LS ++ V + L T ++ FK A + + +TC
Sbjct: 66 SSDFSGSMIRKSSKPD--LSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNY 123
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
ML+AL +G+++E ++ L+ +R I + Y L + ++ LR + E G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
++ A + + E E+ ++ +G SSLM R ID +
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L ++E L +V T+ + + L + G++ EA I M + ++ +++ L
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++L A + ++M HKPD TY ++ F
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 185/438 (42%), Gaps = 22/438 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ CYS G + +++ M G P V N+L++ LY+ + + A ++ M
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGA 130
+ P T++ + L ++GK + + L + + +++ +N + D K +
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M + P TY++I+ G + +V + + KKL+ F++
Sbjct: 627 ALKMLFKMMD-MGCVPDVFTYNTIIFGLVK--NGQVKEAMCFFHQMKKLVYPDFVTLCTL 683
Query: 191 V--IQKLSDMGKTYAAEMIFKRAC-DEKIEL-QDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ + K S + Y F C D+ L +D G +L E + A+ +
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL----AEAGIDNAVSFSERL 739
Query: 247 SERGITVRDSD--YYAFVNVLCKEHQPEEVCGLLRDVV-ERGYIPCAMELSRFVASQCGK 303
GI RD D + CK + L + G P + +
Sbjct: 740 VANGI-CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+ +++ V G + D + L++ Y + +ID+ L+ ++ + + T+
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 364 DVLLDGLFKDGRMEEAVRI-FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
++++ GL K G +++A+ + +D M + ++ ++ ++ L L +A + + ML
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 422 KMGHKPDEATYKQVISGF 439
G +P+ A Y +I+GF
Sbjct: 919 DYGCRPNCAIYNILINGF 936
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S+++DC G +GL ++ ++ G P V N +++ L + + +
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 66 ASCLYGAM-VRDGVSPNKFTWSL------VAQILCRSGKF--EVVLGLLDSGIYSSVMYN 116
A L+ M G++P+ +T++ +A ++ +GK E+ L+ +++ +N
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT---FN 1071
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
+I YS G A+ M G +P TY + + A
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNTGTYEQLPNRA 1112
>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
Length = 511
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 204/498 (40%), Gaps = 85/498 (17%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+D GL D E+ M G P CN+LLD L++ N++ A LY M R
Sbjct: 13 NIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSR 72
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE-------------------------VVLGLLDSGIY 110
V + FT++++ LC+ G+ + ++ GL G Y
Sbjct: 73 SFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKY 132
Query: 111 -------------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
SS+ YN+VI K+G AA + EM + P T+++++
Sbjct: 133 DHAMAVFRKMKLPSSMSYNIVIAACVKRGRNEAAVELFREM-KVKKRVPDIFTFNTVIQS 191
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ K + + IV MV + P G ++ L + AE + +
Sbjct: 192 LSKAGKFKEALDIVDEMVWLQCSPNELTFG--LLVHGLCKAKRALEAESVLEVM------ 243
Query: 218 LQDDTCGC-----MLKALS----KEGRVKEAIQIYHLISERGITVRDSDYYAF---VNVL 265
D GC +L AL KEGRV +A +++ + G + F ++ L
Sbjct: 244 ---DRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGL 300
Query: 266 CKEHQPEEVCGLLRDVV-ERGYIPCAMELSRFVASQCGKGKWK-EVEELLSAVLDKGLLL 323
CK ++ E L+R + E G P + + G K ++L + G
Sbjct: 301 CKANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHP 360
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG--SLDVATYDVLLDGLFKDGRMEEAV- 380
DS + L+ C R+I +A+ L ++ K KG + D +++ LL L DGR+EEAV
Sbjct: 361 DSVTFTILVSESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVA 420
Query: 381 RIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP----------- 427
+ + M+E + + + ++V + C + + A + DEML G P
Sbjct: 421 KFWGEMRERRECWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRGFVPTPGIASMLVNL 480
Query: 428 -----DEATYKQVISGFM 440
D+A ++Q + F+
Sbjct: 481 IQSGSDDARHRQWLQSFL 498
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 170/374 (45%), Gaps = 24/374 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V++ + +G + LE+ M+ GF + NA+L AL++ +E A + +++ G
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
PN T+++ LC++GK + ++L +++S + V+ Y+ +ID + K G A
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D M P T+ ++L G ++K+ + R+ MV +P L + ++
Sbjct: 304 DVFTRMMV-HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG--LQTYNVLM 360
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ +A I+ + +K + +T +++ L + RV EA + ++ +
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 420
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ +A V VLCK+ + +E C +L +VVE C G+ E E+
Sbjct: 421 PNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEV 464
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ ++ KG+ D +++ C ++D AIA K+ + + TY +L+
Sbjct: 465 IEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACS 524
Query: 373 DGRMEEAVRIFDYM 386
++A RIF+ M
Sbjct: 525 ADMADDAFRIFEAM 538
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 175/433 (40%), Gaps = 50/433 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V++ + G E+ M+ G V + L+ L R+ I A + +M
Sbjct: 3 TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---------GIYSSVM-YNLVIDFYSKK 125
+ SPN T++ V LC++ + + L L D G V+ Y+ VID K
Sbjct: 63 E-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A++ M P TYSS++DG + ++ D L+++ L
Sbjct: 122 QRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRV---DEAYSLLMQ--------L 169
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
G D V + + Y A ++ ++G+ E +++
Sbjct: 170 KGEDMVPRAM-----YYNA---------------------VVNGFKRQGKPSECLELLLH 203
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ E+G + D+ A ++ L K + E+ C +++ G P + + V C GK
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E +L +++ + D SS+++ +C ++DKA + ++ + T+
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
LL G + + EA R+ + M + ++ +++ +C + A++ + +M +
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383
Query: 425 HKPDEATYKQVIS 437
+PD TY +I
Sbjct: 384 RQPDANTYAPLIQ 396
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 151/361 (41%), Gaps = 40/361 (11%)
Query: 85 WSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
++ V C++G+ + LLD G+ V+ ++ +I +KG A ++ M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
G +P TY+++++G + ++RI D ++ DM
Sbjct: 61 -GEECSPNVITYNTVVNGLCK------ANRI------------------DEGLELFDDME 95
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K Y A C+ + + ++ AL K RV +A + + + G Y
Sbjct: 96 KRYEA----SHGCEPDV----ISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 147
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ ++ LCK + +E LL + +P AM + V +GK E ELL + +K
Sbjct: 148 SLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEK 207
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G ++ ++++ N + +KA ++ K +V TY+V + GL K G+++EA
Sbjct: 208 GFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEA 267
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
RI M E KV ++ ++ C + KA M+ P T+ ++ G
Sbjct: 268 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 327
Query: 439 F 439
F
Sbjct: 328 F 328
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 175/431 (40%), Gaps = 33/431 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D E ++ MR G P V ++L+D L + + + A L +
Sbjct: 112 STVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKG 171
Query: 76 DGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
+ + P ++ V R GK E++L + + G +++ +N ++ K +
Sbjct: 172 EDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEK 231
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A F+RL + +G+ P TY+ + G + K + + RI+ MVE K+ P
Sbjct: 232 ACQFFERL--LKSGKK--PNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYS 287
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I G+ A+ +F R + T +L S+ + +EA +++ +
Sbjct: 288 S--IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 345
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G Y ++ +C E + + + P A + + C +
Sbjct: 346 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVD 405
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +E L + ++ + C +L+E C ++D+A ++ L +++
Sbjct: 406 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV------LDNVVEIC------ 453
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVV--SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
K G +EAV + + M LK V +++V V+ LC L + A+ ++M G
Sbjct: 454 ----KAGEPDEAVEVIEQMV-LKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGC 508
Query: 426 KPDEATYKQVI 436
P TY +I
Sbjct: 509 APGLVTYTLLI 519
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 17/408 (4%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R P NA++ +L R+ ++ A MVR G P+ +T++ + CR+
Sbjct: 143 MHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTN 202
Query: 97 KFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ +V L D G V+ Y +I+ + G A + EM P Y
Sbjct: 203 QVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMY 257
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLP--KHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
++++ G E+ E ++ M E P + + + D+ ++ K AE + +
Sbjct: 258 AALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE----RKAKEAEEMLQ 313
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
++ + TC ++ A KEGR+ +A+++ L+ RG Y A V C E
Sbjct: 314 EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG 373
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
+ + LL + G P A+ + + QC G + LL + GL+ D + +
Sbjct: 374 KVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 433
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ C + + D+A +L +E + T++ L++GL K G+ + A + + M
Sbjct: 434 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 493
Query: 390 KVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ + LC +K ++ + EML+ KP Y VI
Sbjct: 494 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 541
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 181/481 (37%), Gaps = 92/481 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V++ Y +G D L V +M++ G P V NAL+ + ++ A L M
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
GV+P+ T++L+ + C G E LL D I YN +I+ K G
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD L R + P T++S+++G + K +++ + + MV P +
Sbjct: 448 ACSLFDSLET----RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 503
Query: 188 NDYVIQKLSDM-----GKTYAAEMIFKRACDEKIE---------------LQDDTCGCM- 226
+ I+ L M G ++ EM+ K + L T G M
Sbjct: 504 S--FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561
Query: 227 --------------LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++A EGR+ EA + +S+ G+TV Y ++ Q +
Sbjct: 562 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 621
Query: 273 EVCGLLRDVVERGYIP------------CAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+L+ + +P M L V G WK +E
Sbjct: 622 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE---------- 671
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D F +M+ K E L S TY +L+G +DGR EEA
Sbjct: 672 -LTDVFGLFDVMK----------------KNEFLPNS---GTYSSILEGFSEDGRTEEAT 711
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ MKE + ++ + +V+ C K A M++ G P +Y+ ++SG
Sbjct: 712 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 771
Query: 440 M 440
+
Sbjct: 772 I 772
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 180/442 (40%), Gaps = 28/442 (6%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C + +G +GL + R M+ G+ P+ A A++D R+ + + A + M G++P
Sbjct: 265 CNAERG--EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAP 322
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRL 135
T + V C+ G+ L +L+ G +V YN ++ + +G A L
Sbjct: 323 CVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLL 382
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
N+M + P TY+ ++ G E + R++ LM L+ + + +I L
Sbjct: 383 NKM-RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY--NALINAL 439
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+T A +F I+ T ++ L K G+ A + + G T
Sbjct: 440 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDT 499
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +F+ LCK +E + +++++ P + + + + + V
Sbjct: 500 YTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE 559
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ G D ++ M YC ++++A + +++ K ++D Y+ L+DG G+
Sbjct: 560 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 619
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK-----------------ELRKAMKNH 417
+ AV I M + V + ++ I++ L ++ EL
Sbjct: 620 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 679
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
D M K P+ TY ++ GF
Sbjct: 680 DVMKKNEFLPNSGTYSSILEGF 701
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 131/340 (38%), Gaps = 71/340 (20%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P+ ++ L ++ L + +G MV G +P+ T++ + C G+ V
Sbjct: 532 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 591
Query: 101 VLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
++ + +G+ M YN ++D ++ G A L +M + ++ P TY +L
Sbjct: 592 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV-PNQFTYFILLR--- 647
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM-----IFKRACDE 214
+V + + + +LP L+ G A E+ +F
Sbjct: 648 ---------HLVRMRLVEDVLP-------------LTPAGVWKAIELTDVFGLFDVMKKN 685
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T +L+ S++GR +EA + L+ E I++ + Y A V CK + +
Sbjct: 686 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 745
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L+ +++ G+IP M + LLS ++ +G
Sbjct: 746 WVLVCSMIQHGFIPQLM----------------SYQHLLSGLICEG-------------- 775
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
Q DKA + + S D + V++DGL K G
Sbjct: 776 -----QTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 810
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 161/357 (45%), Gaps = 9/357 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
+MM++ G+ P + N+LL+ N I A L MV G P+ T++ + L
Sbjct: 138 KMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 96 GKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
K + L+D + V Y V++ K+GD A + LN+M +
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIEANVVI 255
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
YS+++D +Y + + + M K + P + +I L + G+ A +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS--LISCLCNYGRWSDASRLLSD 313
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ KI T ++ A K+G++ +A ++Y + +R I Y + +N C +
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E +L ++ + +P + + + C + + EL + +GL+ ++ ++
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
L+ + R D A + ++ + ++ TY++LLDGL K+G++ +A+ +F+Y++
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 159/377 (42%), Gaps = 9/377 (2%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYS 123
L+G M + P+ +S + + + KF++V+ + GI ++ YN++I+ +
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+ A L +M P T +S+L+G + + +V MVE P
Sbjct: 125 RCSRLSLALALLGKMMK-LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDT 183
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I L K A + R + T G ++ L K G A+ +
Sbjct: 184 VTFTT--LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + I Y ++ LCK ++ L ++ +G P + S ++ C
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+W + LLS ++++ + + S+L++ + ++ KA L+ ++ K ++ TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L++G R+ EA ++ + M + + ++ +++ C K + K M+ EM +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 423 MGHKPDEATYKQVISGF 439
G + TY +I GF
Sbjct: 422 RGLVGNTVTYTTLIHGF 438
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
DY + + + ++ GL + + P +E S+ +++ K+ V +
Sbjct: 45 DYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G+ + + + L+ +C ++ A+AL K+ KL D+ T + LL+G R+
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+AV + D M E+ + +F ++ L + +A+ D M++ G +PD TY V
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 436 ISGF 439
++G
Sbjct: 225 VNGL 228
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 183/438 (41%), Gaps = 50/438 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C + +GL + G++P V L+ L ++ I A+ L+ M
Sbjct: 128 TLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM 187
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLG-----LLDSGIY------SSVMYNLVIDFY 122
+ G +PN T+ + + LC G + L L D+ Y + + Y+++ID
Sbjct: 188 QKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGL 247
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G++ A NEM + + + P T+S ++D + + + +++ +M++ ++P
Sbjct: 248 CKVGNWEEAICLFNEMVD-QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
F TY + ++K G + A ++
Sbjct: 307 LF----------------TYTS---------------------LIKGFCLVGDLNSAKEL 329
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + +G Y +N CK + EE L +++ G P + +
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
GK + +EL + + D C ++ C N I +A+ L ++E LD+ T
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
+ L+DGL K G++E A +F+ + E + + ++ ++ C ++ KA +M
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509
Query: 422 KMGHKPDEATYKQVISGF 439
+ G PD TY ++ GF
Sbjct: 510 ENGCSPDLITYSILMRGF 527
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 139/323 (43%), Gaps = 39/323 (12%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE 99
V+ P V + + ++D L + A CL+ MV GV PN T+S++ +LC+ G+
Sbjct: 230 VFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289
Query: 100 VVLGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
LL+ I ++ NL +I + GD +A + M + P +Y+ +
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM-PSKGYEPDVISYNML 348
Query: 155 LDGARRYEKTEVSDRI------VGLMVEKK----LLPKHFLSGN------------DYVI 192
++G + K E + ++ VG+ + K LL FL+G Y +
Sbjct: 349 INGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAM 408
Query: 193 QK-----------LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
K L G + A +F ++L +T GC++ L K G+++ A +
Sbjct: 409 PKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWE 468
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + E GI Y + ++ CK+ Q ++ L + + E G P + S +
Sbjct: 469 LFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFY 528
Query: 302 GKGKWKEVEELLSAVLDKGLLLD 324
K ++V +LL +++K + D
Sbjct: 529 ESNKLEKVVQLLHRMIEKDVWPD 551
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L L+K + +Y + G+ +N LC ++ E + ++ RG
Sbjct: 97 LLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRG 156
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
YIP + + + C + + E +L + G + +L++ C+ I+ A+
Sbjct: 157 YIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIAL 216
Query: 346 ALHIKIEK------LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
H ++ +V +Y +++DGL K G EEA+ +F+ M + V + +F
Sbjct: 217 KWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFS 276
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC ++ KA K + M+++G P+ TY +I GF
Sbjct: 277 VLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGF 317
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 165/415 (39%), Gaps = 44/415 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + V+R M G P V + + L+ L R ++ A+ L M+ G PN T+
Sbjct: 68 FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127
Query: 88 VAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ LC+ GK + + L +Y V+YN++ID +SKKGD G A+ EM +
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE-K 186
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
P TY+S+L G R + + M+ + +P F N ++ MG
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN--LLDGFCKMGDMV 244
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +F L+ + GC +S Y +
Sbjct: 245 EAHRLF---------LEMRSLGCPPDVVS--------------------------YNTLM 269
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+C + +P E LLR+++ G P + + + G +L + GL
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D+F S++++ C ++ A + + + D A L+ GL + R+ E+ +
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389
Query: 383 FDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
F M + + V + +++ +LC K + E+ + G PD K ++
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 141/328 (42%), Gaps = 4/328 (1%)
Query: 110 YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR 169
+ ++ YN +++ +K G + N+M G P TY +L + ++ E +
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDML-GAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+ M + P F +I L K A + D + T G +L
Sbjct: 74 VFRGMAAQGCSPNVF--SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G++KEA+ ++ + RG Y ++ K+ E L +++E+G IP
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ ++ KG++ V+ L +L +G + + F ++L++ +C + +A L +
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
++ L DV +Y+ L+ G+ G+ EA R+ M V S+ I++
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVI 436
L A+K E+ K G +PD +Y +I
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 157/395 (39%), Gaps = 44/395 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLD 106
N LL+ L + Y M+ G PN +T+ + + LC++ +FE V G+
Sbjct: 21 NYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA 80
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G +V Y+++I + A + LNEM +G + P TY S+L G
Sbjct: 81 QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSG-------- 131
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
L MGK A +F R
Sbjct: 132 -----------------------------LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ SK+G + EA +++ + E+G Y + ++ ++ + V L +D++ +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+P + + C G E L + G D ++LM CS + +A
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L ++ + D+ +Y++L+DG K G ++ A+++F + + + + S+ ++ L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ A +M+ G PD A ++ G
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 17/305 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D +S KG + ++ M G +P V N+LL R+ E L+ M+R
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G PN FT++ + C+ G + L + G V+ YN ++ KG
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L EM + P +Y+ ++DG Y K+ D + L E +PK L + +
Sbjct: 281 AQRLLREMIR-SGVGPDIVSYNILIDG---YSKSGALDHAIKLFYE---IPKSGLEPDAF 333
Query: 191 ----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I L GK AA ++FK ++ L + R+ E+ +++ +
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ +Y + LCK + ++VC + ++ ERG+ P +E+S+ + +
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP-DVEISKVILETLRRSDD 452
Query: 307 KEVEE 311
KE E
Sbjct: 453 KEAAE 457
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 140/363 (38%), Gaps = 51/363 (14%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + ++++ M G P N L+D ++ ++ A L+ M+ G P FT
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT- 194
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
YN ++ +S+KG+FG +M +
Sbjct: 195 -----------------------------YNSLLSGFSRKGEFGRVQSLFKDMLR-QGCV 224
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL--PKHFLSGNDYVIQKLSDMGKTYA 203
P T++++LDG + + R L +E + L P +S N +++ + GK +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHR---LFLEMRSLGCPPDVVSYNT-LMRGMCSKGKPHE 280
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A+ + + + + ++ SK G + AI++++ I + G+ Y ++
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
LC+ + + +D++ G P A + V C + E EL A++
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV------ 394
Query: 324 DSFCCSSLMEYY-------CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
F C L+ Y C ++ D + ++ + S DV V+L+ L +
Sbjct: 395 -KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453
Query: 377 EEA 379
E A
Sbjct: 454 EAA 456
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 183/428 (42%), Gaps = 34/428 (7%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C G F ++ M GFVP S + ++ L +++ A L+ M R+G+ P
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRL 135
+ +T++++ C++G + D ++ V Y +I Y K A D L
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA-DEL 552
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM---VEKKLLPKHFLSGNDYVI 192
EM P TY++++DG + + E + +I M +E + K+F
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYF-------- 604
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
KL D +I T G ++ L K RVKEA ++ + G
Sbjct: 605 -KL-DHNNCEGPNVI--------------TYGALVDGLCKANRVKEAHELLDTMLAHGCE 648
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y A ++ CK + ++ + + ERGY P S F+ + V ++
Sbjct: 649 PNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKV 708
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
LS +L+ + + +++ C + D+A L +K+E+ + +V TY ++DG K
Sbjct: 709 LSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGK 768
Query: 373 DGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G++E+ + +F D + + ++ ++++ C L +A K DEM + +
Sbjct: 769 SGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILS 828
Query: 432 YKQVISGF 439
++++I GF
Sbjct: 829 HRKIIEGF 836
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 177/430 (41%), Gaps = 60/430 (13%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G + LE ++ +G+ P+ + NAL+ R +++ A + M+ +++T
Sbjct: 189 NGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYT 248
Query: 85 WSLVAQILCRSGKFEVVLGLLDSG---IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
S A LC+ GK L+D + +V YN ++ + F A D L+ M
Sbjct: 249 LSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRM-RS 307
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ P TY +L G R + RI+ +M+ + P + N + +
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIF-NSLIHAYCKSRDYS 366
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
YA ++ FK+ CGC Q +L+ Y F
Sbjct: 367 YAYKL-FKKMI---------KCGC---------------QPGYLV-----------YNIF 390
Query: 262 VNVLC-KEHQPEEVCGLLRDVVERGY--------IPCAMELSRFVASQCGKGKWKEVEEL 312
+ +C E QP + D+VE+ Y + + +S F CG GK+ + ++
Sbjct: 391 IGSVCSNEEQPSSD---ILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKI 447
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ ++ KG + D S ++ + C +++KA +L ++++ V TY +L+D K
Sbjct: 448 ICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCK 507
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM----GHKPD 428
G +++A + FD M + V+ + L H K M DE+ +M G KP+
Sbjct: 508 AGLIQQARKWFDEMLHKGCTPN---VVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPN 564
Query: 429 EATYKQVISG 438
TY +I G
Sbjct: 565 VVTYTALIDG 574
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 184/464 (39%), Gaps = 59/464 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + GL + + M G P V AL+ A + ++ +A L+ M+
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLL 558
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+G PN T++ + C++G+ E IY+ + ++ + D F
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKA-----CQIYARMRGDI------ESSDMDKYFKLD 607
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
+ C G P TY +++DG + + + + ++ M+ P + D VI
Sbjct: 608 HNNCEG----PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY--DAVIDGF 661
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+GK A+ +F + + T + L K+ R+ +++ + E T
Sbjct: 662 CKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNV 721
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y V+ LCK + +E L+ + E+G P + + + GK ++ EL
Sbjct: 722 VIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRD 781
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL---------------HIKI--------- 351
+ KG + L+ + CSN +D+A L H KI
Sbjct: 782 MCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFI 841
Query: 352 ------EKLKGSLDVAT---YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS------ 396
++L + V Y +L+D K GR+E A+ D ++E+ S +
Sbjct: 842 TSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL---DLLEEISSSPSHAVSNKYL 898
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ L H ++ KA++ + M+ P+ + +I G +
Sbjct: 899 YASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLI 942
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L ++G++ +I ++ G + + ++ CK L + +++ G
Sbjct: 320 LLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG 379
Query: 286 YIPCAMELSRFVASQCGKGKWKE------VEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
P + + F+ S C + VE+ S +LD G++L+ S+ C
Sbjct: 380 CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 439
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ D+A + ++ D +TY ++ L ++E+A +F+ MK +V S ++
Sbjct: 440 KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 499
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
I++ C +++A K DEML G P+ TY +I ++
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYL 541
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 149/372 (40%), Gaps = 43/372 (11%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS + ++H F + + + M+ YGF+P V +CNA + +L Q + +A
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYS 123
Y M R +SPN +T ++V CRSGK + + LL G ++ V YN +I +
Sbjct: 225 FYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHC 284
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+KG +A +L M L P T+++++ G R K + + ++ G M L P
Sbjct: 285 EKGLLSSAL-KLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNT 343
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
T ++ S++G + A + Y
Sbjct: 344 V-------------------------------------TYNTLINGYSQQGDHEMAFRFY 366
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ GI Y + LCK+ + + ++++ + +P + S + QC +
Sbjct: 367 EDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 426
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
EL +++ G + + L+ +C N D A + ++ + LD T
Sbjct: 427 RNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTV 486
Query: 364 DVLLDGLFKDGR 375
+ +GL G+
Sbjct: 487 HQVCNGLNHQGK 498
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 200 KTYAAEMIFKRACDEKIELQD-------DTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
KT+A F+ A D ++++D ++C + +L +GRV A++ Y + I+
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
++ C+ + ++ LL+D+ G+ + + +A C KG +L
Sbjct: 236 PNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKL 295
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ + GL + ++L+ +C ++ +A + +++ L + TY+ L++G +
Sbjct: 296 KNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQ 355
Query: 373 DGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
G E A R ++ M + +++ ++ ++ LC + RKA + E+ K P+
Sbjct: 356 QGDHEMAFRFYEDMVCNGIQRDILTYNTLIL---GLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 429 EATYKQVISG 438
+T+ +I G
Sbjct: 413 SSTFSALIMG 422
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 166/417 (39%), Gaps = 75/417 (17%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + LSL ++ Y +G G ++ M+ YG V A ++DAL + + +++A
Sbjct: 249 GMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVA 308
Query: 67 SCLYGAMVRDG--------------------------------VSPNKFTWSLVAQILCR 94
+ L M+ G V PN F +S LC+
Sbjct: 309 TSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCK 368
Query: 95 SGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G + + + G+Y Y ++I Y K GD AF L EM +TP +
Sbjct: 369 DGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLK-FGITPSVT 427
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY+ +++ + +++ ++ M+ + L+P D V
Sbjct: 428 TYTLLINACCKSGDMAMAEYLLQRMMLEGLIP-------DVV------------------ 462
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
T C++ K+G +++A ++ ++ G++ Y A ++ L
Sbjct: 463 ------------TFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARG 510
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
P E +L +++ RG P M + + KG ++E + S + ++ + D CS
Sbjct: 511 YPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCS 570
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+L+ YC R++D+A AL +K+ D+ Y+ L+ G G M A + M
Sbjct: 571 ALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMM 627
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 16/323 (4%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G ++ + ++ M +G P ++ + +I A G M++ G++P+ T+
Sbjct: 370 GNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTY 429
Query: 86 SLVAQILCRSGKF---EVVLG--LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+L+ C+SG E +L +L+ I V +N +ID + KKG AF+ L+ M
Sbjct: 430 TLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIM-R 488
Query: 141 GRNLTPGFSTYSSILDG--ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
++P TY++++ AR Y E D I+ ++ + L P ++ D VI S
Sbjct: 489 SAGMSPDTVTYNALIHSLIARGYP-NEAKD-ILHELIRRGLSPD-VMTFTD-VIDGFSKK 544
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G A +++ + ++ TC +L + R+ EA ++ + + G+ Y
Sbjct: 545 GNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLY 604
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG-KGKWKEVEELLSAVL 317
++ C C L+ +++ G++P ++ A G + KW + EL +++
Sbjct: 605 NNLIHGFCSAGNMNAACNLVAMMIDDGFLP---NITTHRAFALGFEKKWVKNPELHASLK 661
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQ 340
K +LL C + E+ +Q
Sbjct: 662 LKQILLTHSTCLDVDEHLAMMQQ 684
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 41/279 (14%)
Query: 198 MGKTYAAEMIFKRACDEKIELQD-DTCGCML-KALSKEGRVKEAIQIYHLISERGITVRD 255
+G+ +++FK D +D +T ML E +V A+ + H I I
Sbjct: 160 VGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSM 219
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK----WKEVEE 311
+ + L + HQ + +L + G A LS F+ S C +G WK + E
Sbjct: 220 GVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILME 279
Query: 312 L-----LSAVLDKGLLLDSFCCSSLMEY--------------------------YCSNRQ 340
+ + V+ +++D+ C S ++ YC +
Sbjct: 280 MKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGR 339
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
DKAI L + ++ Y + L KDG M EA + F M E + + I
Sbjct: 340 SDKAINL---LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTI 396
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ C + ++ KA + EMLK G P TY +I+
Sbjct: 397 IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINA 435
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V+D +S KG F + V+ M P V C+ALL+ R + A+ L+ M+ G
Sbjct: 537 VIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAG 596
Query: 78 VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV 113
+ P+ ++ + C +G +V ++D G ++
Sbjct: 597 LKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNI 636
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 203/474 (42%), Gaps = 55/474 (11%)
Query: 13 DALSLVLDCYSH--KGLFMDGL-----EVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
D SL L Y+ KGL +G V M + G VP+V NA++D + ++
Sbjct: 189 DGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 248
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE--------VVLGLLDSGI-YSSVM-- 114
A + M R+G +P+ +T++++ LC E +V G + I +++++
Sbjct: 249 ALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIING 308
Query: 115 ----------------------------YNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLT 145
Y ++I+ KK F A + ++EM NG L
Sbjct: 309 YCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG--LA 366
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+SI+DG + K + + LM + P + + +I L K + A
Sbjct: 367 PNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSS--LIYGLIQDQKLHKAM 424
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + ++ I T +++ K+ A +++ ++ + G+T + Y + L
Sbjct: 425 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL 484
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK + EE L V +G + + + V G L+ ++++G DS
Sbjct: 485 CKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADS 541
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ S L++ C +++++A+++ ++ ++ Y +++ + K+G+ + A +F+
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601
Query: 386 M-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
M S++++ + +S C + ++ +A EM + G PD TY I+G
Sbjct: 602 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFING 655
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 183/459 (39%), Gaps = 75/459 (16%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----G 108
L+ L +R A L MV+DG S N T++L+ + LC+ G+ +L+ G
Sbjct: 166 LIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRG 225
Query: 109 IYSSVM-YNLVIDFYSKKGDF------------------------------GAAFDRLNE 137
+ SV YN +ID Y K G G D E
Sbjct: 226 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEE 285
Query: 138 MCNG---RNLTPGFSTYSSILDGARRYEKTEVSDRI---------------VGLMVE--- 176
+ N R TP T+++I++G + E+ + + R+ G+++
Sbjct: 286 LLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLI 345
Query: 177 --------KKLLPKHFLSG---NDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDD 221
K+ + + F +G N + + D +GK AA +F+ E
Sbjct: 346 KKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAW 405
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L ++ ++ +A+ + + E GIT Y + CK+H+ + L +
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 465
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G P + + C G+ EE S ++ KG++L +SL++ +
Sbjct: 466 EQNGLTPDEQAYNVLTHALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNT 522
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIV 400
D A L K+ D TY VLL L K ++ EA+ I D M V + ++ I+
Sbjct: 523 DFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTII 582
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S + + A +EM+ GHKP TY IS +
Sbjct: 583 ISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSY 621
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/485 (20%), Positives = 195/485 (40%), Gaps = 67/485 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A ++++ K F + E M G P V +++D + ++ A ++ M
Sbjct: 336 AYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLM 395
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDF 128
+G PN +T+S + L + K + L+ + GI V+ Y +I KK +F
Sbjct: 396 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 455
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF RL EM LTP Y+ + + + E +V K ++ L+
Sbjct: 456 DNAF-RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE---EAYSFLVRKGVV----LTKV 507
Query: 189 DY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
Y ++ S G T A ++ ++ +E + T +L+AL K+ ++ EA+ I +
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ G+ Y ++ + KE + + + +++ G+ P A + F++S C G+
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627
Query: 307 KEVEELLSAVLDKGL-----------------------------LLDSFCCSSLMEYYCS 337
+E E L+ + G+ ++D+ C + Y+
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687
Query: 338 NR----------------------QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ ++D L ++ K + TY ++ G K R
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 747
Query: 376 MEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
+EEA +FD+M+ + + + +++ C +K KA+ +M++ G +P +Y
Sbjct: 748 LEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHY 807
Query: 435 VISGF 439
+I G
Sbjct: 808 LIVGL 812
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++K L KEGR+ A ++ + RG+ Y A ++ CK + ++ G+ + G
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + CG+ K E EELL+ + +G ++++ YC +ID A+
Sbjct: 261 CNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDAL 319
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
+ + LD+ Y VL++ L K R +EA M + + + ++
Sbjct: 320 RVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGY 379
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
C + ++ A++ M G +P+ TY +I G +
Sbjct: 380 CKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLI 415
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 173/432 (40%), Gaps = 51/432 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + ++D S D +MR G P V ++ + + A ++ M
Sbjct: 97 AFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEM 156
Query: 74 VRDG-VSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSV-MYNLVIDFYSKKG 126
++ P+ F + ++ C+ + + L LL + I V +YN ++D +
Sbjct: 157 IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 216
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
F A+ L+E + +P TY+S++ GA + +K +++ RI M+E+K+ P +
Sbjct: 217 RFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPT--IV 274
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I LS G+ Y A + + EL ++ L K G + +A +Y ++
Sbjct: 275 SYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIM 334
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G Y ++ C+ + E GL + R Y P
Sbjct: 335 KRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCP------------------ 374
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
LD ++++ C R++D A AL ++ S D Y+VL
Sbjct: 375 ----------------LDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 418
Query: 367 LDGLFKDGRMEEAVRIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L G F+ R EEA RI + + + V + ++ V++ C L M EM + G
Sbjct: 419 LHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRG 474
Query: 425 HKPDEATYKQVI 436
PD ATY +I
Sbjct: 475 IAPDFATYSALI 486
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 166/431 (38%), Gaps = 80/431 (18%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVS-ACNALLDALYRQNEIRLASCLYGAMV 74
S+V+D G L + M G P A +L+DAL + + A+ M
Sbjct: 63 SVVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMR 122
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDF 128
G+ P+ T++++ + C++ E + I S+ +Y ++ID Y K+
Sbjct: 123 DAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRM 182
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + L EM R + P Y+SI+DG L + L
Sbjct: 183 DRALELLREMRVERRIQPDVVIYNSIVDG---------------LCRSNRFLEAWKFLDE 227
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+Q S TY + + + AC K ++K A++I++ + E
Sbjct: 228 TMVLQGCSPTVVTYTS--LIRGACKAK-------------------KMKLAVRIWNAMLE 266
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
R I Y ++ L K + + ++R E
Sbjct: 267 RKIQPTIVSYSVIIDGLSKAGRVYDAYRVVR----------------------------E 298
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLL 367
+E L G L+ ++L++ C + +D A AL+ +I K G+ + TY L+
Sbjct: 299 METL-------GCELNVVIYTTLIDGLCKSGFLDDAYALY-RIMKRSGAFPNQRTYATLI 350
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
D ++ R E A+ +FD++++ + + + VVS LC + L A EM G
Sbjct: 351 DTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSA 410
Query: 428 DEATYKQVISG 438
D Y ++ G
Sbjct: 411 DTHAYNVLLHG 421
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 195/443 (44%), Gaps = 22/443 (4%)
Query: 11 QSDAL---SLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
Q+DA+ +L+ C+ G+F ++V+ +++R G P ++ +LD L + + A
Sbjct: 225 QADAVCYNALLSGCF-RTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEA 283
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDF 121
++ M+ + + T+ ++ LCRSG + V ++ +G+ V +YN +I
Sbjct: 284 GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKG 343
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS----SILDGARRYEKTEVSDRIVGLMVEK 177
+ + G G A+ + G + +TY+ +LD E TE+ + L +
Sbjct: 344 FCEVGRTGEAWKFWDS--TGFSGIRQITTYNIMTKGLLDSGMVSEATEL---LKQLENDA 398
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P G +I L + G A I + A + EL + M+ K+GR
Sbjct: 399 SCSPDKVTFGT--LIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A ++Y + + G Y A +N C+ + + + ++ G P + + +
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C K++E L +L++G D +SL+ C ++++D A+ + +I
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKN 416
+DV +++L+ GL G+++EA I+ MKE + ++ ++ + + KA
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
+L G KPD TY I G
Sbjct: 637 WTAILDNGLKPDIVTYNTRIKGL 659
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 166/408 (40%), Gaps = 18/408 (4%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P + N +L +L + ++ A L+ ++ R GV+P++ T+S + L + + + L
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 103 GLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
LLD G+ + +V YN ++ + G F A ++ +P +TY +LDG
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDG 273
Query: 158 ----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
R E EV R++ + + L I L G +A ++
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGIL------IHGLCRSGDVDSAARVYSDMVK 327
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ L ++K + GR EA + + GI + + Y L E
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSE 386
Query: 274 VCGLLRDVVERGYI-PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL+ + P + + C G E+L + G LD F SS++
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMI 446
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+C + + A ++ + K + Y+ L++G + ++ +A++I+ M
Sbjct: 447 NRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCC 506
Query: 393 SS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ LC ++ ++A EML+ G KPD TY +I G
Sbjct: 507 PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGL 554
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 110/282 (39%), Gaps = 33/282 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ + G D EVY+ M G P NAL++ R ++I A +Y M
Sbjct: 443 SSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTS 502
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
+G P T++ + LC++ K++ L
Sbjct: 503 NGCCPTIITYNTLIDGLCKAEKYQEASSL------------------------------T 532
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
EM R P TY+S++ G R +K +V+ RI +++ L + ++ +I L
Sbjct: 533 KEMLE-RGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV--HNILIHGL 589
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
GK A I+ ++ T ++ + G + +A ++ I + G+
Sbjct: 590 CSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDI 649
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
Y + LC ++ E LL +V+ G +P + S V
Sbjct: 650 VTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 149/375 (39%), Gaps = 17/375 (4%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGF--------VPAVSACNALLDALYRQNEIRLASC 68
LVLD + L EV R + F + ++ N + L + A+
Sbjct: 330 LVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATE 389
Query: 69 LYGAMVRDG-VSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFY 122
L + D SP+K T+ + LC +G FE++ +SG V Y+ +I+ +
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G A + M P Y+++++G R K + +I M P
Sbjct: 450 CKDGRTHDANEVYKNMVKD-GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I L K A + K + + T +++ L ++ +V A++I
Sbjct: 509 --IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRI 566
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ I + G+ V + ++ LC + +E + ++ E+ P + + +
Sbjct: 567 WDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYE 626
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G + L +A+LD GL D ++ ++ CS + + + L ++ V T
Sbjct: 627 IGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVIT 686
Query: 363 YDVLLDGLFKDGRME 377
+ +L+ + K G ++
Sbjct: 687 WSILVRAVIKYGPIQ 701
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 184/428 (42%), Gaps = 64/428 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ +S +G D +E+ M P NA L L L MVR
Sbjct: 286 STLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVR 342
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGA 130
PN+ T+S++ LC++G + + +L+ G +V+YN +I +S++G
Sbjct: 343 KDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDD 402
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A LN M +P ++++ L G R E+ + ++ ++ M+
Sbjct: 403 ALKLLNSM----PCSPDVISFNAALKGLCRAERWDDAEELIVQMLR-------------- 444
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
E L + T ++ +L + GRV AI+++ + + G
Sbjct: 445 -----------------------EDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYG 481
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER-GYIPCAMELSRFVA---SQCGKGKW 306
T Y + +N L ++ GL+ +E +PC ++ + A C +W
Sbjct: 482 CTPDIVTYSSLINGLSEQ-------GLVESAIELFQSMPCKPDIFGYNAVLKGLCRAARW 534
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
++ EL+S + K + + L+ C +D+AI + ++ K + D+ TY+ L
Sbjct: 535 EDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNAL 594
Query: 367 LDGLFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
++G + GR+++A R+ M + VS +S + LC + ++A + EML+M
Sbjct: 595 INGFSEQGRLDDARRLLSTMSCKPDAVSYNS---ALKGLCRAERWKEAEEVVAEMLRMKC 651
Query: 426 KPDEATYK 433
P+E T+K
Sbjct: 652 PPNEVTFK 659
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/465 (21%), Positives = 185/465 (39%), Gaps = 91/465 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +++ Y G D L + M V P N +L L + A L MVR
Sbjct: 184 TTLINGYCRSGRLADALALIASMPV---APDTYTYNTVLMGLCGARQWEDAEALMAEMVR 240
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
+ PN+ T++ + C++G + + LLD V+Y+ +++ +S++G
Sbjct: 241 NHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDD 300
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A E+ NG P Y++ L G ++ E +++ MV K LP N+
Sbjct: 301 AI----ELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLP------NEA 350
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
L+ +C C + G V A+++ + + G
Sbjct: 351 TFSMLT-------------------------SCLC------QNGLVDCAMEVLEQMHKYG 379
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ---CGKGKWK 307
Y + ++ + ++ LL +PC+ ++ F A+ C +W
Sbjct: 380 CRPDAVIYNTLIYSFSEQGRVDDALKLLNS------MPCSPDVISFNAALKGLCRAERWD 433
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ EEL+ +L + L + L++ C N +++ AI + ++ K + D+ TY L+
Sbjct: 434 DAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLI 493
Query: 368 DGLFKDGRMEEAVR----------IFDYMKELKVVSSS---------------------- 395
+GL + G +E A+ IF Y LK + +
Sbjct: 494 NGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNE 553
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+F I+++ LC + +A++ ++M K G PD TY +I+GF
Sbjct: 554 ITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGF 598
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 40/409 (9%)
Query: 47 VSACNALLDALYRQNEI----RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---- 98
V ACN L+ L Q + R+ L A D VS N +LVA CR G+
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHN----TLVAG-YCRDGRLADAE 166
Query: 99 EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD-- 156
++ SG + V Y +I+ Y + G A + M + P TY+++L
Sbjct: 167 RLLAAAGLSGAANVVTYTTLINGYCRSGRLADALALIASM----PVAPDTYTYNTVLMGL 222
Query: 157 -GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR----A 211
GAR++E E ++ MV P I+ G A + R
Sbjct: 223 CGARQWEDAEA---LMAEMVRNHCPPNEVTFATQ--IRAFCQNGLLDRAVQLLDRMPQYG 277
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
C + + ++ S++GRV +AI++ + + + T+ Y A + LC +
Sbjct: 278 CTPDVVIYST----LVNGFSEQGRVDDAIELLNGMLCKPNTI---CYNAALKGLCIAQRW 330
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E+V L+ ++V + +P S + C G E+L + G D+ ++L
Sbjct: 331 EDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTL 390
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKELK 390
+ + ++D A+ L + + S DV +++ L GL + R ++A I ++E
Sbjct: 391 IYSFSEQGRVDDALKL---LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDC 447
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +F I++ LC + A++ ++M K G PD TY +I+G
Sbjct: 448 PLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGL 496
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 33/334 (9%)
Query: 115 YNLVIDFYSKKGDFGAAFD------RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSD 168
Y+ V+ ++ FG D +N C+ R L FS + +L + + T +
Sbjct: 128 YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNT 187
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
I GL VE GK A +F + E + T G ++
Sbjct: 188 LIRGLCVE----------------------GKIGEALHLFDKTIGEGFQPDVVTYGTLMN 225
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K G AI++ + ++ Y ++ LCK+ Q E L +++ +G P
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 285
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C +WK V LL+ +++ ++ + S++++ C I AIA
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI--AIAHD 343
Query: 349 IKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
+ +K + DV TY L+DG M+EAV++FD M V + S+ I+++ C
Sbjct: 344 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 403
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + KAM ++M G D TY +I G
Sbjct: 404 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 153/375 (40%), Gaps = 8/375 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++ + H V + G P + N L+ L + +I A L+
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G P+ T+ + LC+ G + LL S + + + YN +ID K
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ +EM + ++P TY+S++ + + ++ MV K++P +
Sbjct: 269 TEAFNLFSEMIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 327
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
V+ L G A + +E T ++ + EA++++ +
Sbjct: 328 --VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N C+ + ++ GLL + +G I + + + C G+ +
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ G + D L++Y C N + +A+ L IE D+ Y++ +D
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505
Query: 369 GLFKDGRMEEAVRIF 383
G+ + G +E A +F
Sbjct: 506 GMCRAGELEAARDLF 520
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 189/428 (44%), Gaps = 20/428 (4%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ G + ++ G VP V N L+ + EI A + R V+P+
Sbjct: 151 FCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA---LEVLERMSVAPD 207
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI----YSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
T++ + + LC SGK + + +LD + Y V+ Y ++I+ G A L+
Sbjct: 208 VVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM + P TY+ +++G + + + + + + M P + ++ +++ +
Sbjct: 268 EM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN--VITHNIILRSMC 324
Query: 197 DMGKTYAAEMIF----KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
G+ AE + ++ C + T ++ L ++ + AI + + + G
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVV----TFNILINFLCRKRLLGRAIDVLEKMPKHGCV 380
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y ++ C+E + + L +V RG P + + + + C GK E+
Sbjct: 381 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI 440
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L+ + KG +++++ + + A+ L ++ + D+ TY LL GL +
Sbjct: 441 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500
Query: 373 DGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+G+++EA++IF M+ L + S+ ++ ++ LC ++ +A+ M++ G KP EAT
Sbjct: 501 EGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEAT 560
Query: 432 YKQVISGF 439
Y +I G
Sbjct: 561 YTILIEGI 568
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 181/406 (44%), Gaps = 30/406 (7%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL--- 105
A N L L R E+ M+ G P+ + + + CRSGK + ++
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEIL 167
Query: 106 -DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL----DGAR 159
+SG V+ YN++I Y K G+ A + L M ++ P TY++IL D +
Sbjct: 168 ENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM----SVAPDVVTYNTILRSLCDSGK 223
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI---FKRACDEKI 216
E EV DR ++++ P ++ + +D G A +++ K+ C +
Sbjct: 224 LKEAMEVLDR----QLQRECYP-DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDV 278
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ + KEGR+ EAI+ + + G + + +C + +
Sbjct: 279 V----TYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
LL D++ +G P + + + C K ++L + G + +S + L+ +C
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFC 394
Query: 337 SNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+++D+AI +++I +G D+ TY+ LL L KDG+++ AV I + + K S
Sbjct: 395 QEKKMDRAIE-YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS-KGCSPV 452
Query: 396 --SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ V+ L + + A++ +EM + G KPD TY ++ G
Sbjct: 453 LITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 14/281 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G + ++ M YG P V N +L ++ A L M+R
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G SP+ T++++ LCR + +L+ + +S+ YN ++ + ++
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L M + R P TY+++L + K + + I+ + K P L +
Sbjct: 402 AIEYLEIMVS-RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP--VLITYNT 458
Query: 191 VIQKLSDMGKT-YAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLIS 247
VI L+ +GKT YA E++ + + L+ D T +L+ L +EG+V EAI+I+H +
Sbjct: 459 VIDGLTKVGKTEYAVELLEEM---RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDME 515
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
I Y A + LCK Q L +VE+G P
Sbjct: 516 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 556
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 202/496 (40%), Gaps = 74/496 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A+S ++D KG ++ + +GF+P + NAL++AL + ++ A LY M
Sbjct: 325 AVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM 384
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSVM-YNLVIDFYSKKGDF 128
+ N T+S++ C+ G +V +++ GI ++ YN +I+ + K GD
Sbjct: 385 HSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDL 444
Query: 129 GAA-----------------------------------FDRLNEMCNGRNLTPGFSTYSS 153
AA F EM N + + P T+++
Sbjct: 445 SAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM-NEKEIAPSVYTFTA 503
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL-----------SGNDYVIQKLSDM---- 198
++ G + + ++ MVE+K+ P D + L DM
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563
Query: 199 ------------------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
G+ AA+ + ++L + +L +GR+ EA+
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ +RGI + + ++ K+ + + GLL+ + ++G P ++ + + +
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+G +K+ E L ++ + + ++ M C +ID+A L K+ S +
Sbjct: 684 SKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNS 743
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
TY LD L K+G M+EA + M + + +++++ I++ C L L +A K EM
Sbjct: 744 VTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEM 803
Query: 421 LKMGHKPDEATYKQVI 436
+ G PD TY +I
Sbjct: 804 TENGIFPDCITYSTII 819
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 186/437 (42%), Gaps = 11/437 (2%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S + ++ Y D + V R+M +P V +A+L+ L R + L +
Sbjct: 146 SSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEV 205
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSK 124
+ V GV P+ +T S V + LC F E +L + + S V YN++I K
Sbjct: 206 FDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCK 265
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A + + + + L TY +++ G R ++ + ++ MVE +P
Sbjct: 266 GGGVLEALE-VRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEA 324
Query: 185 -LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+SG ++ L G +A + + ++ AL K + +A +Y
Sbjct: 325 AVSG---LVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLY 381
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + D Y ++ CK + ++E G + + C
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF 441
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G E L + ++++GL + ++L+ YC + Q++KA L+ ++ + + + V T+
Sbjct: 442 GDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTF 501
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+ GL M EA ++FD M E K+ + ++ +++ C + KA + ++ML
Sbjct: 502 TALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH 561
Query: 423 MGHKPDEATYKQVISGF 439
G PD TY+ +ISG
Sbjct: 562 NGLVPDTYTYRPLISGL 578
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 179/443 (40%), Gaps = 53/443 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + + ++ Y ++YR M P+V AL+ L NE+
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYS-SVMYNLVID 120
AS L+ MV + P + T++++ + C++ FE++ +L +G+ + Y +I
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVE 176
G AA D ++++ + +NL YS++L G R E S ++ +
Sbjct: 577 GLCSTGRVSAAKDFIDDL-HKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L+ L K DM + + + K+ D+ + M+ A SKEG
Sbjct: 636 MDLVCHAVLIDG---AMKQQDMKRLFG---LLKKMYDQGLRPDSVIYTSMIDAYSKEGSF 689
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
K++ + L+ Y AF+N LCK + + L ++ P ++ F
Sbjct: 690 KKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCF 749
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ S +G KE +L +L KGLL ++
Sbjct: 750 LDSLTKEGNMKEATDLHHEML-KGLLANT------------------------------- 777
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
ATY++L+ G K GR+ EA ++ M E + ++ ++ C ++ A++
Sbjct: 778 ----ATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833
Query: 416 NHDEMLKMGHKPDEATYKQVISG 438
D ML+ G +PD + +I G
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYG 856
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 185/438 (42%), Gaps = 60/438 (13%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
LV C H GL+ + LE ++ +G+ P+ NAL+ L ++ + + M
Sbjct: 175 LVRRCCRH-GLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDR 134
G ++ T AQ LC+ G++ L +L+ ++ +V+ +I + F A
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293
Query: 135 LNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
L+ M CN + P TY ++L G + ++ RI+ +M+ + P L + ++
Sbjct: 294 LHRMRCN--SCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS--LVH 349
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ G A +F R TCG S G V
Sbjct: 350 GYCNAGDYAYAYKLFNRM---------TTCG------SPPGYVA---------------- 378
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY-----IPCAM---ELSRFVASQCGKGK 305
Y F+ +C Q E L D+VE+ Y C + + F CG GK
Sbjct: 379 ----YNIFIGSICG--QEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGK 432
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+++ ++L ++ KG + D+ + ++ + C ++++K+ L ++++ + DV TY +
Sbjct: 433 FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTI 492
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHL----KELRKAMKNHDEML 421
L+D K G +E+A FD E++ V S V+ + L H K+L +A M+
Sbjct: 493 LIDSFCKAGLIEQARSWFD---EMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549
Query: 422 KMGHKPDEATYKQVISGF 439
P+ TY +I G
Sbjct: 550 DAACYPNAVTYSALIDGL 567
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 187/468 (39%), Gaps = 66/468 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + GL + MR G P V ALL A + ++ A ++ MV
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD 550
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
PN T+S + LC++G+ + + + I +S N+ DFY +
Sbjct: 551 AACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG--NVESDFYFEG---------- 598
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
N+ C + P TY +++DG + +K + ++ M+ P + D +I
Sbjct: 599 NDTCT---IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY--DALIDGF 653
Query: 196 SDMGKTYAAEMIFKRAC--------------------DEKIELQ--------DDTCG--- 224
+GK A+ +F R D +++L +D+C
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNV 713
Query: 225 ----CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
M+ LSK G +++A+ + L+ E+G + Y A ++ L K + + L +
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQ 773
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ +G P + + C G E LL + + L Y+C+ +
Sbjct: 774 MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE------MKHTHWPKHLQGYHCAVQG 827
Query: 341 IDK----AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVV 392
K ++ L ++E + Y +L+D K GR+E A+ + + E L +
Sbjct: 828 FSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMT 887
Query: 393 SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
S+ + ++ LC ++ +A + EM + G PD + ++ G +
Sbjct: 888 STGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLI 935
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 179/430 (41%), Gaps = 38/430 (8%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C G F ++ + M GFVP S ++ L + ++ + L+ M R GV+P
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ +T++++ C++G E D G +V+ Y ++ Y K A D
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545
Query: 136 NEMCNGRNLTPGFSTYSSILDG---ARRYEKT-EVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M + P TYS+++DG A +K EV ++++G + + GND
Sbjct: 546 HRMVDAA-CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIG--TSGNVESDFYFEGNDTC 602
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
T A ++ T G ++ L K +V +A ++ + G
Sbjct: 603 ---------TIAPNVV--------------TYGALIDGLCKAQKVSDAHELLDAMLAAGC 639
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y A ++ CK + + + + + GY+P + + G+ +
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+LS +L+ + +++++ +I+KA+ L +E+ S +V TY L+DGL
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759
Query: 372 KDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE- 429
K G+ + ++++F M + ++ ++++ C L +A DEM K H P
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM-KHTHWPKHL 818
Query: 430 ATYKQVISGF 439
Y + GF
Sbjct: 819 QGYHCAVQGF 828
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 34/325 (10%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
CE DAL +D + G + EV+ M G++P+V +L+D +++ +
Sbjct: 639 CEPNQIVYDAL---IDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD 695
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVI 119
LA + M+ D +PN T++ + L + G+ E L LL + G +V+ Y +I
Sbjct: 696 LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALI 755
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D K G A+ +M N + P + TY +++ GL+ E L
Sbjct: 756 DGLGKTGKADASLKLFKQM-NSKGCAPNYVTYRVLINHC----------CAAGLLDEAHL 804
Query: 180 L---------PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
L PKH L G +Q S K A+ + + + G ++ +
Sbjct: 805 LLDEMKHTHWPKH-LQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSF 861
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
SK GR++ A++++ + E ++ + Y + + LC Q EE L ++ +G +
Sbjct: 862 SKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIV 921
Query: 288 PCAMELSRFVASQCGKGKWKEVEEL 312
P + V KW E +L
Sbjct: 922 PDLIVFVSLVKGLIEVNKWDEALQL 946
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 174/405 (42%), Gaps = 17/405 (4%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ SC G S A S+V+D G D + M +G N+LLD RQ
Sbjct: 168 LGSCPGSVSPL-AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQK 226
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYN 116
+ + M +G+ T++++ L + V L + ++V +Y
Sbjct: 227 DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYT 286
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
VI+ Y + G+ A L+E C G + P TY +++G + + E ++ ++ M
Sbjct: 287 AVINAYCRAGNMRRAAKVLDE-CVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQG 345
Query: 177 KKLLPKHFLSGNDYVIQKLSD--MGKTYAAEMIFKRACDEK--IELQDDTCGCMLKALSK 232
+ + N + + D K + + +A EK +EL T + L +
Sbjct: 346 QGV------GLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCR 399
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
R+ EA + H++ E G+ Y +++ CK+ E L R++ E+G P +
Sbjct: 400 VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 459
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + KG +E E + KG + D + +SL+ +C N ++D A+ L +++
Sbjct: 460 YNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 519
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
+ +V Y L+ GL K+GR E A +++D M + ++ S
Sbjct: 520 QRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSL 564
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 161/397 (40%), Gaps = 44/397 (11%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS---GKFEVVLGLL 105
A + ++D L + + A L M R GVS N ++ + R G+ + +L ++
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 238
Query: 106 DS-GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
++ GI ++V Y +++D S D NEM N+ Y+++++ R
Sbjct: 239 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAVINAYCRAGN 297
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ +++ V + P G +I +G+ AAEM+ + + L
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYG--VLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
M+ ++G V +A++I + + G+ + Y LC+ ++ +E LL ++E
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G +P + + ++ C G E L + +KG
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG----------------------- 452
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
+ V TY+V++DG K G + EA R M++ V ++ +V
Sbjct: 453 ------------ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVH 500
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ A+K +EM + G +P+ Y +ISG
Sbjct: 501 GHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGL 537
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 149/371 (40%), Gaps = 54/371 (14%)
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAF 132
VSP S+V LC+SG+ + LLD G+ +++ YN ++D Y ++ D G
Sbjct: 175 VSP--LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQ 232
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ L M N + TY+ ++D AR K E L E K N+
Sbjct: 233 EILEIMEN-EGIEATVGTYTILVDSLSTARDISKVE------ALFNEMK--------ANN 277
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V G Y + C + G ++ A ++
Sbjct: 278 VV-------GDVYLYTAVINAYC-------------------RAGNMRRAAKVLDECVGN 311
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + Y +N CK Q E LL D+ +G + + + C KG +
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 371
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA-IALHIKIEKLKGSLDVATYDVLLD 368
++ +A+ G+ LD + ++L C ++D+A LHI IE + + TY L+
Sbjct: 372 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE-MGVVPNYVTYTTLIS 430
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
KDG M EA R+F M E S ++ +++ +R+A + EM K G P
Sbjct: 431 IHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVP 490
Query: 428 DEATYKQVISG 438
D TY ++ G
Sbjct: 491 DVYTYASLVHG 501
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 281 VVERGYIPCAMELSRFVASQ-----CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++ER C +S AS C G+ + LL + G+ L++ C +SL++ Y
Sbjct: 163 LLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCY 222
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ + + +E V TY +L+D L + + +F+ MK VV
Sbjct: 223 VRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDV 282
Query: 396 S-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V++ C +R+A K DE + G +P+E TY +I+GF
Sbjct: 283 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGF 327
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 178/417 (42%), Gaps = 4/417 (0%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S K + L++ M V G +P V N ++ L + N+I A+ L M+ G P+
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323
Query: 83 FTWSLVAQILCRSGKF-EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
T+ + LCR GK E L+ ++ + N +I+ Y G A LNE
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P TY+ ++ G + + +V M + P ++ L G
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA--ILVNGLCKAGLL 441
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A ++ + + C++ AL ++ +V A+ + + +G Y +
Sbjct: 442 EEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSL 501
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LCK + +E L +++ G + + + + + +G +++ L++ +L +G
Sbjct: 502 IYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD + L++ +C I+K + L+ ++ D + +++++GL K G+++ A
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE 621
Query: 382 IF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
D + V ++ V++ LC + +++A+ D + G +PD TY IS
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 156/354 (44%), Gaps = 18/354 (5%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE- 99
+GF P + N L+ L ++ + A L M R G PN T++++ LC++G E
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 100 ---VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
V+ + G+ +SV+YN +I +K A + L+EMC + P TY+S++
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT-KGCKPDLFTYNSLI 502
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK-----TYAAEMIFKR 210
G + ++ + + R+ M+ + + + +I L G T +M+F+
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTY--NTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+KI T ++KA K G +++ +++Y + G+ +N LCK +
Sbjct: 561 CTLDKI-----TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LRD + RG++P + + + C G+ KE L + +G+ D+F ++
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + C ++ A + + T++VL+ L K E + D
Sbjct: 676 FISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLD 729
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 179/411 (43%), Gaps = 16/411 (3%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY P + + +L+ L N ++A+ ++ M+ GVSP FT+ +V + LC
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + LL + +S++Y +I S+K A L EM P T+
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMF-VMGCMPDVQTF 291
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK-TYAAEMIFKR 210
+ ++ G + K + ++V M+ + P + G +++ L +GK A +++ K
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG--FLLHGLCRIGKLNEARKILIKI 349
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEH 269
C L ++ G++KEA + + G Y ++ LCKE
Sbjct: 350 PCPNNAILNT-----LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
L+ ++ RG P + + V C G +E +L + +GL ++S +
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KE 388
L+ C ++ A+ L ++ D+ TY+ L+ GL K R++EA R+F M +
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD 524
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++ ++ ++ L +KA+ ++ML G D+ TY +I F
Sbjct: 525 GAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 40/382 (10%)
Query: 96 GKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
GKF+++ LL + GI + ++ +++ Y K G G A L +M P F +
Sbjct: 126 GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKS 185
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y +L+ +V+ + M+ K + P F G V++ L + +A + +
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFG--IVMKALCMFNEVDSACSLLRD 243
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++ ALS++ +V EA+++ + G + ++ LCK ++
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL-------SAVLDK---- 319
+ L+ ++ RG+ P M + C GK E ++L +A+L+
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLING 363
Query: 320 ---------------------GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G D F + LM C + A L ++ +
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
+V TY +L++GL K G +EEA + M + ++S + ++ LC +++ A+
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G KPD TY +I G
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGL 505
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 10/219 (4%)
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD-----V 281
+ L G+ K ++ + E GI R+S + + K QP + LL D +
Sbjct: 119 INKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYL 178
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
E + + L V C + ++LS KG+ F +M+ C ++
Sbjct: 179 CEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS----KGVSPTVFTFGIVMKALCMFNEV 234
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
D A +L + K + Y L+ L + ++ EA+++ + M + + +F V
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC + ++ A K D ML G PD TY ++ G
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 167/388 (43%), Gaps = 43/388 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + +++++C+ GL V + G+ P + N + + +I
Sbjct: 97 EGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQ 156
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGI--YSSVMYNLVID 120
A + +V G ++ ++ + LC+ G+ L LL D + ++VMYN VID
Sbjct: 157 ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVID 216
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
SK AFD +EM R ++P TYS+++ G
Sbjct: 217 GMSKDKHVNDAFDLYSEMVAKR-ISPDVVTYSALIRGF---------------------- 253
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+++ KL D A +F + E I+ T ++ KEGR+K+A
Sbjct: 254 ---------FIVGKLKD------AIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ ++ + I S + V+ CK+ + +E + ++++G P + +
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C + + +++ + + +G+ + + ++ +C +++DKA+ L I++ DV
Sbjct: 359 CLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
TY+ L+DGL K G++ A ++ + M +
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHD 446
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 190/413 (46%), Gaps = 29/413 (7%)
Query: 45 PAVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KF 98
P ++A N +L +L + L M +G++PN T++++ C+ G F
Sbjct: 64 PTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAF 123
Query: 99 EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS----TYSS 153
V+ +L G ++ N I + KG A + +++ + GF +Y +
Sbjct: 124 SVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL-----VALGFHLDQVSYGT 178
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI-----QKLSDMGKTYAAEMIF 208
+++G + +T + +++ V+ KL+ + + N + + ++D Y+ EM+
Sbjct: 179 LINGLCKVGETRAALQLLR-RVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYS-EMVA 236
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
KR + + T +++ G++K+AI +++ + I + V+ CKE
Sbjct: 237 KRISPDVV-----TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 291
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ ++ +L ++ + P + V C K KE + + + ++ +G+ +
Sbjct: 292 GRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTY 351
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
SLM+ YC +Q++KA + + + + +V +Y+++++G K ++++A+++F M
Sbjct: 352 CSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH 411
Query: 389 LKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ ++ ++ LC ++ A + +EM G P+ TY +++ +
Sbjct: 412 KHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL 464
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/386 (18%), Positives = 159/386 (41%), Gaps = 82/386 (21%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+++ +G+ Q +A+ + V+D S D ++Y M P V +AL+ +
Sbjct: 195 LLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFF 254
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 118
+++ A L+ M+ + + P+ +T++++ C+ G+ + +LD
Sbjct: 255 IVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLD------------ 302
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
M +++ P ST+++++DG + K + + +M+++
Sbjct: 303 -------------------MMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQG 343
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P V+ TY + L D C L K+ V +
Sbjct: 344 IKPN--------VV--------TYCS-------------LMDGYC------LVKQ--VNK 366
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A +I++ +S+RG+T Y +N CK + ++ L ++ + IP + + +
Sbjct: 367 AKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLID 426
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK +L++ + D+G + +S++ AL K++
Sbjct: 427 GLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN------------ALLTKLKDQGIQP 474
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFD 384
++ T +L+ GL + G++E A ++F+
Sbjct: 475 NMHTDTILIKGLCQSGKLEAARKVFE 500
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 202/482 (41%), Gaps = 51/482 (10%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
++SC G + + L +++ + GL EV+ + G P+ + NA++ A R
Sbjct: 136 VRSC-GCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAG 194
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YN 116
+ A + M DG P+ FT++ + +CR G + L L+ +GI +V+ Y
Sbjct: 195 AVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYT 254
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+++D + A L M + ++ +TY S++ GA R + E + R++ +E
Sbjct: 255 MLVDGFCNASRVEEAVCVLERM-KEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIE 313
Query: 177 K----------KLLPKHFLSGNDY------VIQKLSD----MGKTYAAEMIFKRACDEKI 216
LL + LS ND + +K+S +G T + +I C K+
Sbjct: 314 SDPTLHSIAYHTLL--YCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVI---PCAVKV 368
Query: 217 ELQDDTCGCMLKALSKEGR------------------VKEAIQIYHLISERGITVRDSDY 258
D C + + K G + +A + + + G+ Y
Sbjct: 369 LESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESY 428
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ K + E ++ + E G+ P + + + G + + L V++
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVME 488
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
GL+ D +SL++ C Q+D A ++ + +V TY+VL+ GL G + +
Sbjct: 489 HGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSK 548
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A+ + + MK + + SF + C ++++ KA K ++M + G PD TY +I
Sbjct: 549 AIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIK 608
Query: 438 GF 439
Sbjct: 609 AL 610
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 174/443 (39%), Gaps = 50/443 (11%)
Query: 20 DCYSH---------KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
DC+++ +G+ + L + + M G P V L+D + + A C+
Sbjct: 214 DCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVL 273
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKK 125
M GVS + T+ + R + E +L I S S+ Y+ ++ + K
Sbjct: 274 ERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLL-YCLSK 332
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT----EVSDRIVG--------- 172
D L + + R G +T+S ++ A + ++ E+ D +
Sbjct: 333 NDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDM 392
Query: 173 -LMVEKKLLP-KHFLSGNDYVIQKLSD-----------MGKTYAAEMIFKRACDEKIELQ 219
+M+ K L K N Y Q +SD + +A +RA + +Q
Sbjct: 393 YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452
Query: 220 DD-------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T ++ K G V +A ++ E G+ + + ++ LC HQ +
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 512
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ ++ E G P + + C G + ELL+ + G+ D++ ++ +
Sbjct: 513 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 572
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+C R+I+KA L + + S D TY+ L+ L + R++EA I M+ + +
Sbjct: 573 LSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCI 632
Query: 393 SSS--SFVIVVSRLCHLKELRKA 413
+ ++ VV L + +A
Sbjct: 633 GTKQHTYWPVVGALTKMGRFSEA 655
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S ++ ++V+DC++ G LE ++M+ GF P + N L++ + +
Sbjct: 419 DGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHD 478
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVID 120
A ++ G+ P+ T++ + LC + + F + + G+ +V YN++I
Sbjct: 479 AKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIH 538
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G A + LN+M +TP ++++ + R K E + ++ M +
Sbjct: 539 GLCSAGHVSKAIELLNKM-KMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 597
Query: 181 PKHFLSGNDYVIQKLSDMGKT-YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + + +I+ L D + A E+I I + T ++ AL+K GR EA
Sbjct: 598 PDSYTY--NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEA 655
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 160/397 (40%), Gaps = 48/397 (12%)
Query: 52 ALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDS 107
AL DAL R+ + L++ L + G ++ + + R G EV + +
Sbjct: 115 ALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRL 174
Query: 108 GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
G+ S+ +YN VI + G AA+ R +M P TY++++ G R +
Sbjct: 175 GLRPSTAIYNAVIAASVRAGAVDAAYLRFQQM-PADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+ R+V M + P V+ TY L D C
Sbjct: 234 ALRLVKQMERAGIRPN--------VV--------TYTM-------------LVDGFCNA- 263
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
RV+EA+ + + E+G++ ++ Y + V+ + + E +L + +E
Sbjct: 264 -------SRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDP 316
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
++ + KE EL + +G LL S S ++ C+ + ++ +
Sbjct: 317 TLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIP--CAVKVLESSDL 374
Query: 347 LHIKIEKLK--GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+ + +K G+L Y +++ + + +A + F M ++SS S+ IV+
Sbjct: 375 CELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDC 434
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
E+ +A++ M + G P+ T+ +I+G++
Sbjct: 435 FAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYL 471
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 196/456 (42%), Gaps = 48/456 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F + ++R M G VP L+D+L + + L G MV GV + T+
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347
Query: 86 SLVAQILCRSGKFEVV-----LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + L + GK + V L D+ + V Y ++ID K + A L EM
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEM-E 406
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
++++P T+SS+++G + + + +M E+ + P G + G+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT-LIDGFFKFQGQ 465
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A E+ C E +E+ ++ L + G+++EA+ ++ S G+++ +Y
Sbjct: 466 DAALEVYHDMLC-EGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ L K +++++R +P A+ + F+ C GK+KE + +L+ + + G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMG 584
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
L D ++++ +C + KA+ L +K+ +K +L TY+ L+ GLF G +E+
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL--ITYNTLVAGLFGTGAVEK 642
Query: 379 AVRIFDYM-------------KELKVVSSSS-----------------------FVIVVS 402
A + + M + L+ S S + ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
LC+ RKA +EML G PD T+ +I G
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 171/411 (41%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V M G V N L+ R ++ A + M GV PN T++
Sbjct: 189 LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVY 248
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
CR+ E L + + + V+ ++V + + G F A+ EM + P
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM-DKVGAVP 307
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY +++D + + + ++G MV + ++ L ++ L GKT +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD--LVTYTALMDWLGKQGKTDEVKD 365
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ A + + L T ++ AL K V EA Q+ + E+ I+ + + +N
Sbjct: 366 TLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K ++ R + ERG P + + E+ +L +G+ ++ F
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKF 485
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SL+ N +I++A+AL SLD Y L+DGLFK G M A + +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ + + + ++ LC L + ++A EM MG KPD++TY +I
Sbjct: 546 MDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMI 596
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 171/390 (43%), Gaps = 23/390 (5%)
Query: 8 RDSQSDALSLVLDCYSH--KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R +D SL YSH L + + R R P A N LL AL
Sbjct: 67 RFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH--- 118
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SGIYS--SVMYNLVIDF 121
A + M + GV + T + + LCR+G+ + L D GI++ + +N +I
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAG 178
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y + GD AA + M + L Y++++ G R + + + ++ +M E + P
Sbjct: 179 YCRVGDTPAALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +++ G A ++ ++ + L T ++ L ++GR EA
Sbjct: 238 -NVATYTPFIVYYCRTKGVEEAFDL-YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA--S 299
++ + + G Y ++ L K + +E+ LL ++V RG + M+L + A
Sbjct: 296 LFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV---MDLVTYTALMD 352
Query: 300 QCGK-GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
GK GK EV++ L L L L+ + L++ C +D+A + +++E+ S
Sbjct: 353 WLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISP 412
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+V T+ +++G K G +++A MKE
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKE 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 185/433 (42%), Gaps = 13/433 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S V++ + +GL E RMM+ G P V L+D ++ A +Y M+
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFG 129
+GV NKF + L ++GK E + L SG+ V Y +ID K GD
Sbjct: 477 CEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF E+ + RN+ P Y+ ++ K + + I+ M L P S +
Sbjct: 537 TAFKFGQELMD-RNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQ--STYN 593
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G+T A + I+ T ++ L G V++A + + +
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + + + + + + + + ++ G + + C G ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D+ ++L+ +C + +D A A + ++ S ++AT++ LL G
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK--AMKNHDEMLKMGHK 426
L GR+ EA + M++ + ++ ++ I+V+ H K+ K AM+ + EM+ G
Sbjct: 774 LESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVT--GHGKQSNKVEAMRLYCEMVGKGFV 831
Query: 427 PDEATYKQVISGF 439
P +TY +IS F
Sbjct: 832 PKVSTYNALISDF 844
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 20/355 (5%)
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
CR + LL S ++V YN+++ S D A L EMC R + T +
Sbjct: 84 CRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCK-RGVPFDGVTVN 139
Query: 153 SILDGARRYEKTE----VSDRIVGLMVEKKLLPKHFLS--GNDYVIQKLSDMGKTYAAEM 206
++L G R + + ++DR G+ H L G + +I +G T AA
Sbjct: 140 TLLAGLCRNGQVDAAAALADRGGGI---------HALDVIGWNTLIAGYCRVGDTPAALS 190
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ R + + + ++ + G+V A + ++ E G+ + Y F+ C
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ EE L +V G + + LS VA C G++ E L + G + +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHV 310
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY- 385
+L++ + + ++L ++ +D+ TY L+D L K G+ +E +
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + ++ ++ +++ LC + +A + EM + P+ T+ VI+GF+
Sbjct: 371 LSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 128/305 (41%), Gaps = 8/305 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ KG L++ M++ P + N L+ L+ + A L MV G SP+
Sbjct: 599 HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPS 658
Query: 82 KFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
T V Q +S + +V+L ++++G+++ + +YN ++ G A L
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE 718
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM G + P T+++++ G + + + M+ + + P ++ + ++ L
Sbjct: 719 EML-GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN--IATFNTLLGGLE 775
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+G+ A + +E + T ++ K+ EA+++Y + +G + S
Sbjct: 776 SVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A ++ K + L +D+ +RG P + V+ EV++ L +
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895
Query: 317 LDKGL 321
+KG
Sbjct: 896 KEKGF 900
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 185/461 (40%), Gaps = 69/461 (14%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+S L++ Y +G+ +E + ++ + GF P+V CN +L ++ + L
Sbjct: 160 NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 219
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYS 123
L+ M G+ PN T++++ LC G + LL + + + V YN ++++Y
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279
Query: 124 KKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
KKG + AA + ++ M C G + TY+ +D L
Sbjct: 280 KKGRYKAAIELIDYMICKG--IEADVCTYNVFID---------------------NLCTN 316
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
H ++ A ++ K+ E I + T ++ KEG++ A Q+
Sbjct: 317 H----------------RSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 360
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD-------VVERGYIPCAMEL-- 293
++ +S+ ++ Y A + C EE LL + E G + AM++
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYA 420
Query: 294 --------------SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ V+S C GK E E+ L + GL+ +S ++ Y S
Sbjct: 421 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 480
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSSSFV 398
A + + K TY LL GL K G + EA + + + + V S +
Sbjct: 481 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 540
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ C L +A+ D+M++ PD TY +++G
Sbjct: 541 TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 581
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 184/462 (39%), Gaps = 34/462 (7%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ +C G + ++++ G + + M G VP + +++
Sbjct: 421 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 480
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYN 116
+ A + M++ G P+ FT+ + + LC+ G L+ G SVMYN
Sbjct: 481 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 540
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL-MV 175
++ K G+ A ++M N+ P TYSS+L G R K + + G M
Sbjct: 541 TLLAETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 599
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAA-----EMIFKRACDEKIELQDDTCGCMLKAL 230
L P H + ++ LS G AA EM+ K C + + ++ +
Sbjct: 600 RGTLFPNHVMY--TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN-----AIIDSC 652
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S+ G++ +A + + G+ + Y ++ K+ L ++ G P
Sbjct: 653 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 712
Query: 291 MELSRFV------------ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ + GK +E +L +L+ G++ +L+ C
Sbjct: 713 LTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRV 772
Query: 339 RQIDKAIALHIKIEKLK-GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SS 396
I A L ++E L GS +VA ++ GL G+ E+A+ + D+M ++++ + ++
Sbjct: 773 GDIQGAFKLKDEMEALGFGSHEVAE-SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 831
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
F ++ R C ++ +A+K M G K D Y +I G
Sbjct: 832 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 873
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 160/387 (41%), Gaps = 26/387 (6%)
Query: 25 KGLFMDG--LEVYRMMRVYGFVP-AVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGL G +E + + ++P AV + N LL + + A L+ MV++ V
Sbjct: 509 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 568
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLLDSGI------YSSVMYNLVIDFYSKKGDFGAAFD 133
P+ +T+S + LCR GK + L + + + VMY ++D SK G AAF
Sbjct: 569 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 628
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
EM + P +++I+D R + ++ M + P L+ + ++
Sbjct: 629 FFEEMMK-KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN--LATYNILLH 685
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR------------VKEAIQ 241
S ++ E I T ++ LSK G ++E+
Sbjct: 686 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTV 745
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ H + E G+ + + Y +N +C+ + L ++ G+ + S V
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK ++ +L +L LL ++LM +C + +I +A+ L +E LDV
Sbjct: 806 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 865
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKE 388
Y+VL+ G+ +G A +++ M+
Sbjct: 866 AYNVLIMGMCANGDSAAAFELYEEMRH 892
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 172/416 (41%), Gaps = 48/416 (11%)
Query: 57 LYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV---------LGLLDS 107
L + A +Y M +G + FT +++ LCR GK +GL
Sbjct: 406 LNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL--- 462
Query: 108 GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTEV 166
+ +S+ Y+ +I+ Y GD AF ++M G++ P F TY S+L G +
Sbjct: 463 -VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH--PSFFTYGSLLKGLCKG----- 514
Query: 167 SDRIVGLMVE-KKLLPK-HFLSGN------DYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
G +VE KK L + H++ G + ++ + G + A +F + +
Sbjct: 515 -----GNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 569
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA-FVNVLCKEHQPEEVCGL 277
T +L L ++G+ A+ ++ RG + Y V+ L K P+
Sbjct: 570 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 629
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+++++G P + + + S +G+ + + S + G+ + + L+ +
Sbjct: 630 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 689
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR------------MEEAVRIFDY 385
+ + + ++L+ + + D T+ L+ GL K G MEE+ +
Sbjct: 690 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHE 749
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
M E V+ + ++ +++ +C + +++ A K DEM +G E ++ G +
Sbjct: 750 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 32/305 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + A + ++D S +G M + + MR +G P ++ N LL ++ +
Sbjct: 636 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR 695
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSG---------------KFEVVLG-LLDSG- 108
LY M+R+G+ P+K T+ + L +SG + VVL +L++G
Sbjct: 696 YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGV 755
Query: 109 IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY----SSILDGARRYEKT 164
I Y +I+ + GD AF +EM GF ++ S+++ G KT
Sbjct: 756 IPKHAQYITLINGMCRVGDIQGAFKLKDEM-----EALGFGSHEVAESAMVRGLLHCGKT 810
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E + ++ M+ +LLP ++ ++ + K AE + + E L+ D
Sbjct: 811 EDAMLVLDHMLRMRLLPT--IATFTTLMHRFCRDAKI--AEALKLKGVMELCGLKLDVVA 866
Query: 225 --CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ + G A ++Y + R + + Y V+ + + + LL D+
Sbjct: 867 YNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQ 926
Query: 283 ERGYI 287
ERG I
Sbjct: 927 ERGLI 931
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++ KEG + A++ + L+ G + + K+ + E V L R++ ++G
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 228
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + C +G K+ LL + + G + ++L+ +YC + AI
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 346 ALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL 404
L I KG DV TY+V +D L + R +A +
Sbjct: 289 EL-IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL---------------------- 325
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
LK++RK M + P+E TY +I+GF+
Sbjct: 326 --LKKMRKEMIS----------PNEVTYNTLINGFV 349
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 10/343 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP N ++ R+ ++ A MV P+ FT +++ + LC G +
Sbjct: 259 GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 318
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L ++ I +V YN +I K+G F AFD L EM + L P TY++IL
Sbjct: 319 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM-EEKKLGPDCYTYNAILC 377
Query: 157 GARRYE-KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
E + E + + MVEK P F + +++ L G A +F +
Sbjct: 378 ALADAEGQVEKAFQFRNKMVEKSFKPDLFTC--NILLRGLCTEGMLDNALKLFNTWISKG 435
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISER-GITVRDSDYYAFVNVLCKEHQPEEV 274
+ T ++ L KEGR +EA + + E+ G+ + Y + C+E Q E+
Sbjct: 436 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKA 495
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+VE+ + P + + C +G + +L + + KG +D+ ++++
Sbjct: 496 FQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISG 555
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
C + ++A L ++++ K D TY+ +L L GRME
Sbjct: 556 LCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 186/417 (44%), Gaps = 26/417 (6%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYR---QNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+++ M+ P + N L++AL R + + L+ ++ +++ GV NK ++
Sbjct: 156 QIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVK-NK-----LS 209
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ + GK + D+ Y+++ L + + + G + D+LNE+ L P
Sbjct: 210 EAIGLIGKMKDFSCFPDNASYNTI---LDVLWLCRSGKTDQSIDKLNELLES-GLVPHQI 265
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY++I+ G R + E + + MVEK P F + +++ L G A +F
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC--NILLRGLCTEGMLDNALKLFN 323
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK-- 267
+ + T ++ L KEGR +EA + + E+ + D Y + +LC
Sbjct: 324 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKL---GPDCYTYNAILCALA 380
Query: 268 --EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
E Q E+ +VE+ + P + + C +G +L + + KG +D+
Sbjct: 381 DAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 440
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFD 384
++++ C + ++A L ++E+ G + D TY+ ++ G ++G++E+A + +
Sbjct: 441 VTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRN 500
Query: 385 YMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E K F I++ LC L KA+K + + G D TY +ISG
Sbjct: 501 KMVE-KSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGL 556
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 44/298 (14%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY-RQNEIRLASCLYGAMVRDGVSPNKF 83
+G F + ++ M P NA+L AL + ++ A MV P+ F
Sbjct: 347 EGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLF 406
Query: 84 TWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T +++ + LC G + L L ++ I +V YN +I K+G F AFD L EM
Sbjct: 407 TCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 466
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
L P +TY++I+ G R + E + + MVEK P F
Sbjct: 467 EEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLF-------------- 512
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
TC +L+ L +EG + +A+++++ +G + Y
Sbjct: 513 -----------------------TCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTY 549
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
++ LCKE + EE LL ++ E+ P + + + G+ E EE +S +
Sbjct: 550 NTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 188/459 (40%), Gaps = 29/459 (6%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + + +++ G M+ + M V G + C ++D L++ + + A
Sbjct: 40 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 99
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDF 121
++ +++ ++PN T+S + C+ GK E+ +L V N+ +I+
Sbjct: 100 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 159
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y+KKG A D L EM RN+ P Y+ ++DG + + +V+D M ++L
Sbjct: 160 YAKKGMLSKAVDVLREMVQ-RNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 218
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + D ++ L +G+ A + + I+ ++ KEG A+
Sbjct: 219 SNVIF--DILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 276
Query: 242 IYHLISERGITVRDSDYYAFVNVLCK--EHQPEEVCG------------------LLRDV 281
I + E+ I Y A + L + ++ P VC +L ++
Sbjct: 277 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEM 336
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G +P A+ + + C G ++ E L +L + L++ Y + +
Sbjct: 337 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKA 396
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
DK + +H K+ L + Y+ L+ + G +A + D M + + + ++ +
Sbjct: 397 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 456
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ C + KA+K + +M G P+ TY ++ G
Sbjct: 457 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 495
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 170/415 (40%), Gaps = 38/415 (9%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + G +P V C+++L R ++ A+ L+ M G+ PN +++ + L +SG+
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 98 FEVVLGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L + + +++ V+D K G A + + E NL P TYS
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA-EEVFETILKLNLAPNCVTYS 119
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++LDG + K E+++ ++ M EK+ +P + ++ + +I + G A + +
Sbjct: 120 ALLDGYCKLGKMELAELVLQKM-EKEHVPPNVITFSS-IINGYAKKGMLSKAVDVLREMV 177
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ ++ K G A + R + + + +N L + + +
Sbjct: 178 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 237
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L+ D+ +G P + + + +G ++ + +K + D ++L
Sbjct: 238 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL- 296
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYD-------VLLDGLFKDGRMEEAVRIFDY 385
+KG L + YD ++ GL D + E+A+ I +
Sbjct: 297 ---------------------IKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNE 335
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK ++ ++ ++ I++ LC + KA DEML M P T+K ++ +
Sbjct: 336 MKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 390
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 126/322 (39%), Gaps = 52/322 (16%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L L DC + D L++ M+ YG +P N L+ L + + A M+
Sbjct: 318 LGLAPDCKTE-----DALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEML 372
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
P T + + RS K + +L L+ SG+ S +YN +I + + G
Sbjct: 373 VMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR 432
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L+EM R ++ TY++++ G G VEK L
Sbjct: 433 KAKVVLDEMVK-RGISADLVTYNALIRG-----------YCTGSHVEKAL---------- 470
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG----RVKEAIQIYHL 245
KTY+ + + I T +L LS G ++E ++
Sbjct: 471 ----------KTYSQMFV------DGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 514
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
++ERG+ + Y V+ + ++ L +++ +G++P + ++ GK
Sbjct: 515 MNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGK 574
Query: 306 WKEVEELLSAVLDKGLLLDSFC 327
E ELL+ +L KG + +SF
Sbjct: 575 MIEARELLNDLLTKGRIPNSFT 596
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 168/428 (39%), Gaps = 44/428 (10%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+A SL++D YS G P + +L+D +++ A +
Sbjct: 238 EARSLIIDMYSK-----------------GIDPDIVNYASLIDGYFKEGNQLAALSIVQE 280
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAF 132
M + + ++ + + L R GK+ D S M L + K D A
Sbjct: 281 MKEKNIRFDVVAYNALIKGLLRLGKY-------DPRYVCSRMIELGLAPDCKTED---AL 330
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D LNEM + P TY+ ++ G + E ++ + M+ + +P + +++
Sbjct: 331 DILNEM-KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT--HKFLV 387
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ S K I ++ +EL ++ + G ++A + + +RGI+
Sbjct: 388 KAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGIS 447
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG----KWKE 308
Y A + C E+ + G P + + G +E
Sbjct: 448 ADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEE 507
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+L+S + ++GL+ ++ L+ Y K I LHI++ + TY+VL+
Sbjct: 508 TEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLIS 567
Query: 369 GLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVS---RLCHLKELRKAMKNHDE----- 419
K G+M EA + D + + ++ +S ++ I+ L + E+ +++K E
Sbjct: 568 DYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKK 627
Query: 420 -MLKMGHK 426
+++MG K
Sbjct: 628 LLIEMGRK 635
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 168/384 (43%), Gaps = 8/384 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G S LS++++C+S G V+ + G+ P L+ L + +I
Sbjct: 98 NGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHK 157
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGI--YSSVMYNLVID 120
A + ++ G N+ ++ + LC+ G+ + L +L D + VMYN +ID
Sbjct: 158 ALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIID 217
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K AFD +EM R + P TY++++ G + + + ++ M+ + +
Sbjct: 218 GVCKDKLVNDAFDFYSEMVAKR-ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENIN 276
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + ++ GK A+ +F + ++ T ++ V +A
Sbjct: 277 PTVYTFS--ILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
I++ +++ G+ Y ++ CK +E L ++ + P + + +
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ +L+ + D+G + +SL++ C N +DKAI L K++ V
Sbjct: 395 CKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFD 384
TY++L++GL K GR+++A ++F+
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFE 478
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 182/414 (43%), Gaps = 9/414 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+ ++R M G + + L++ + L+ ++ +++ G P+ T + + +
Sbjct: 89 VSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKG 148
Query: 92 LCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC G L D + + V Y +I+ K G AA + L + +G+ +
Sbjct: 149 LCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI-DGKLVRL 207
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y++I+DG + + + MV K++ P + + +I L MG+ A
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPT--VVTYNTLICGLCIMGQLKDAIG 265
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + E I T ++ A KEG+VKEA ++ ++ ++ + Y + +N C
Sbjct: 266 LLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYC 325
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
++ + + + + G P S ++ C E +L + K + D
Sbjct: 326 LVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVV 385
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+SL++ C + +I A+ L ++ ++ TY+ LLD L K+ +++A+ + +
Sbjct: 386 TYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL 445
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K+ + S ++ I+++ LC L+ A K +++L G+ D TY +I GF
Sbjct: 446 KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGF 499
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 170/394 (43%), Gaps = 24/394 (6%)
Query: 56 ALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMY 115
LY Q L S + + +P+ + + L ++ + +V+ L ++ +
Sbjct: 44 TLYSQLH-NLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIAS 102
Query: 116 NLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEV 166
NLV I+ +S+ G +F + + + P T ++++ G ++
Sbjct: 103 NLVTLSILINCFSQLGHNSLSFSVFSNILK-KGYEPDAITLTTLIKGLCLKGDIHKALHF 161
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
D+++ L + + L I L +G+T AA + +R + + L +
Sbjct: 162 HDKVLALGFQLNQVSYRTL------INGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTI 215
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ + K+ V +A Y + + I Y + LC Q ++ GLL ++
Sbjct: 216 IDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENI 275
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P S V + C +GK KE + + ++ K + + +SLM YC +++KA +
Sbjct: 276 NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAES 335
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KEL--KVVSSSSFVIVVS 402
+ + ++ + DV +Y +++ G K ++EA+++F+ M K++ VV+ +S ++
Sbjct: 336 IFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS---LID 392
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
LC + A+K EM G P+ TY ++
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 127/291 (43%), Gaps = 8/291 (2%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N ++D + + + A Y MV + P T++ + LC G+ + +GLL I
Sbjct: 213 NTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMIL 272
Query: 111 SSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
++ +++++D + K+G A + M +++ P TY+S+++G +
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK-KDVKPNIVTYNSLMNGYCLVNEVN 331
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ I M + + P + +I + A +F+ ++I T
Sbjct: 332 KAESIFNTMAQIGVAPD--VHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L K GR+ A+++ + +RG Y + ++ LCK H ++ LL + +
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
P + + C G+ K+ +++ VL G +D + +++++ +C
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFC 500
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 128/311 (41%), Gaps = 10/311 (3%)
Query: 1 MIQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M++ +G+ + D + + ++D L D + Y M P V N L+ L
Sbjct: 196 MLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLC 255
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM 114
+++ A L M+ + ++P +T+S++ C+ GK + V + ++ + +++
Sbjct: 256 IMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIV 315
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +++ Y + A N M + P +YS ++ G + + + + ++
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQ-IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEE 374
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M K++ P + + +I L G+ A + D T +L AL K
Sbjct: 375 MHCKQIFPD--VVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
V +AI++ + + I Y +N LCK + ++ + DV+ GY
Sbjct: 433 HHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTY 492
Query: 294 SRFVASQCGKG 304
+ + C KG
Sbjct: 493 NTMIKGFCKKG 503
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 177/426 (41%), Gaps = 45/426 (10%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G++ + + V++ M G +P V CN+ + AL R N I+ A ++ +MV G PN
Sbjct: 237 YSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLN 136
++S + G F + L++ + ++ +N++I+ Y++ G A
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFE 356
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M N + + P T+++ VI L
Sbjct: 357 DMQN-KGMIPDTVTFAT-------------------------------------VISSLC 378
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+G+ A F D + + C+++ G + +A ++ + + I
Sbjct: 379 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 438
Query: 257 DYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y+ + +N L KE + E ++ +V+ G P + + + C G +E LL A
Sbjct: 439 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 498
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ G+ + + +L++ YC N +ID A+ + + Y+++L GLF+ R
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558
Query: 376 MEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
A ++F M E VS ++ +V+ LC +A +++ M K D T+
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618
Query: 435 VISGFM 440
VIS +
Sbjct: 619 VISAML 624
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 203/466 (43%), Gaps = 45/466 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++DCY L V+ R++R G P V + N L+D ++ E+ A L+ M+
Sbjct: 126 NILIDCYRRMHRPELALAVFGRLLRT-GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMI 184
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
VSP+ T++ + LC++ + V+ ++D+GI ++ YN +I YS G +
Sbjct: 185 EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWK 244
Query: 130 AAFDRLNEM-----------CNG-----------------------RNLTPGFSTYSSIL 155
+ EM CN + P +YS++L
Sbjct: 245 ESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLL 304
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + +V LMV K ++P H + +I + G A +IF+ ++
Sbjct: 305 HGYAAEGCFANMNSLVNLMVSKGIVPNHRFF--NILINAYARCGMMDKAMLIFEDMQNKG 362
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ T ++ +L + GR+ +A+ ++ + + G+ ++ Y + C + +
Sbjct: 363 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAK 422
Query: 276 GLLRDVVERGYIPCAME-LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L+ +++ + P ++ S + + +G+ E ++++ ++ G + +SLME
Sbjct: 423 ELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEG 482
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
YC +++A AL + + + Y L+DG K+GR+++A+ +F M V +
Sbjct: 483 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 542
Query: 395 SS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S + I++ L + A K EM++ G TY V+ G
Sbjct: 543 SVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL 588
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 169/389 (43%), Gaps = 69/389 (17%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + N L+D R + LA ++G ++R G+ P+ +C
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPD----------VCS---------- 159
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
YN +ID +SK+G+ A++ +M ++++P TY+S++DG + ++
Sbjct: 160 ----------YNTLIDGFSKEGEVDKAYELFYKMIE-QSVSPDVVTYNSLIDGLCKTKEM 208
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
S+R++ MV+ + P + KTY +
Sbjct: 209 VKSERVLEQMVDAGIRPNN----------------KTYNS-------------------- 232
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ S G KE+++++ +S G+ + +F++ LC+ ++ +E + +V +
Sbjct: 233 -LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLK 291
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G P + S + +G + + L++ ++ KG++ + + L+ Y +DKA
Sbjct: 292 GPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKA 351
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSR 403
+ + ++ D T+ ++ L + GR+++A+ F++M ++ V S + + ++
Sbjct: 352 MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQG 411
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATY 432
C+ EL KA + EM+ P Y
Sbjct: 412 CCNHGELVKAKELISEMMNKDIPPPGVKY 440
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/427 (19%), Positives = 173/427 (40%), Gaps = 43/427 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +L Y+ +G F + + +M G VP N L++A R + A ++ M
Sbjct: 301 STLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQN 360
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
G+ P+ T++ V LCR G+ + L ++D G+ S +Y +I G+
Sbjct: 361 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVK 420
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + ++EM N PG +SSI++ + + I+ LMV+ P
Sbjct: 421 AKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPN-------- 472
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ + + + Y C++ G ++EA + ++ G
Sbjct: 473 -VVTFNSLMEGY----------------------CLV------GNMEEAFALLDAMASIG 503
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y V+ CK + ++ + RD++ +G P ++ + + + +
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAK 563
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++ +++ G + ++ C N D+A L K+ + D+ T+++++ +
Sbjct: 564 KMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K GR +EA +F + +V + ++ +++S L + +A + K G PD
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDS 683
Query: 430 ATYKQVI 436
++
Sbjct: 684 RLLNHIV 690
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 178/417 (42%), Gaps = 4/417 (0%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S K + L++ M V G +P V N ++ L + N+I A+ L M+ G P+
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323
Query: 83 FTWSLVAQILCRSGKF-EVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
T+ + LCR GK E L+ ++ + N +I+ Y G A LNE
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P TY+ ++ G + + +V M + P ++ L G
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA--ILVNGLCKAGLL 441
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A ++ + + C++ AL ++ +V A+ + + +G Y +
Sbjct: 442 EEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSL 501
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+ LCK + +E L +++ G + + + + + +G +++ L++ +L +G
Sbjct: 502 IYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD + L++ +C I+K + L+ ++ D + +++++GL K G+++ A
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE 621
Query: 382 IF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
D + V ++ V++ LC + +++A+ D + G +PD TY IS
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 157/354 (44%), Gaps = 18/354 (5%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE- 99
+GF P + N L+ L ++ + A L M R G PN T++++ LC++G E
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 100 ---VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
V+ + G+ +SV+YN +I +K A + L+EMC + P TY+S++
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT-KGCKPDLFTYNSLI 502
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK-----TYAAEMIFKR 210
G + ++ + + R+ M+ + + + +I L G T +M+F+
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTY--NTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+KI T ++KA K G +++ +++Y + G+ +N LCK +
Sbjct: 561 CTLDKI-----TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LRD + RG++P + + + C G+ KE L + +G+ D+F ++
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + C ++ A + + + T++VL+ L K E + D
Sbjct: 676 FISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLD 729
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 179/411 (43%), Gaps = 16/411 (3%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY P + + +L+ L N ++A+ ++ M+ GVSP FT+ +V + LC
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + LL + +S++Y +I S+K A L EM P T+
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMF-VMGCMPDVQTF 291
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK-TYAAEMIFKR 210
+ ++ G + K + ++V M+ + P + G +++ L +GK A +++ K
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG--FLLHGLCRIGKLNEARKILIKI 349
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEH 269
C L ++ G++KEA + + G Y ++ LCKE
Sbjct: 350 PCPNNAILNT-----LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
L+ ++ RG P + + V C G +E +L + +GL ++S +
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KE 388
L+ C ++ A+ L ++ D+ TY+ L+ GL K R++EA R+F M +
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD 524
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++ ++ ++ L +KA+ ++ML G D+ TY +I F
Sbjct: 525 GAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 40/382 (10%)
Query: 96 GKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
GKF+++ LL + GI + ++ +++ Y K G G A L +M P F +
Sbjct: 126 GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKS 185
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y +L+ +V+ + M+ K + P F G V++ L + +A + +
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFG--IVMKALCMFNEVDSACSLLRD 243
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++ ALS++ +V EA+++ + G + ++ LCK ++
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL-------SAVLDK---- 319
+ L+ ++ RG+ P M + C GK E ++L +A+L+
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLING 363
Query: 320 ---------------------GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G D F + LM C + A L ++ +
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
+V TY +L++GL K G +EEA + M + ++S + ++ LC +++ A+
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G KPD TY +I G
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGL 505
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 10/219 (4%)
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD-----V 281
+ L G+ K ++ + E GI R+S + + K QP + LL D +
Sbjct: 119 INKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYL 178
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
E + + L V C + ++LS KG+ F +M+ C ++
Sbjct: 179 CEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS----KGVSPTVFTFGIVMKALCMFNEV 234
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
D A +L + K + Y L+ L + ++ EA+++ + M + + +F V
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC + ++ A K D ML G PD TY ++ G
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333
>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
Length = 1014
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 172/378 (45%), Gaps = 9/378 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV- 74
+++L + KG + L + +MM G VP A LL+ L + +++ AS ++ ++
Sbjct: 557 TILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIIC 616
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIY-SSVMYNLVIDFYSKKGDFG 129
++G+ + ++ + + G + ++ S +Y +S YN+++ Y K G F
Sbjct: 617 KEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFS 676
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ M + + P TY ++ G +++ + + MV + + P + D
Sbjct: 677 KSLYLYKYMVR-KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVF--D 733
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I S+ K + A +F ++ T M+ L ++ + ++ ++ + +
Sbjct: 734 ILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQV 793
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ + Y A VN C+ + + L ++ G +P + S + C GK +E
Sbjct: 794 GLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEA 853
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ S ++ G++ ++LM C +I A+ L +E + +DV +Y+VL+ G
Sbjct: 854 VIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITG 913
Query: 370 LFKDGRMEEAVRIFDYMK 387
L KD R+ +A+ +++ MK
Sbjct: 914 LCKDKRISDALDLYEEMK 931
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/495 (19%), Positives = 198/495 (40%), Gaps = 74/495 (14%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ----------- 60
S + + ++D Y H+G ++ VY M YG P V LL L +
Sbjct: 448 SVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMF 507
Query: 61 --------------NEIRLASCLYGA----------MVRDGVSPNKFTWSLVAQILCRSG 96
N + L C YG MV++ P+ T++++ CR G
Sbjct: 508 CLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKG 567
Query: 97 KFEVVL----GLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K L +LD G+ +V Y +++ +G AA E+ L Y
Sbjct: 568 KILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 627
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKH---------FLSGND---------YVIQ 193
+S+++G + R++ M + ++ P ++ G Y+++
Sbjct: 628 NSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVR 687
Query: 194 K---------------LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
K LS+ G A ++ E I ++ A S++ ++
Sbjct: 688 KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHN 747
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+Q+++ + ++ Y A +N L +++ ++ +LR++++ G P V
Sbjct: 748 ALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVN 807
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
++C GK L + G++ SS++ C ++++A+ + + +
Sbjct: 808 AKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVP 867
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
VAT+ L+ L K+ ++ +A+ + M+ ++ V S+ ++++ LC K + A+ +
Sbjct: 868 TVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLY 927
Query: 418 DEMLKMGHKPDEATY 432
+EM G P+ TY
Sbjct: 928 EEMKSKGLWPNVTTY 942
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 165/397 (41%), Gaps = 29/397 (7%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----- 105
N +L ++ + A C+ M RD + + +T++++ LCR + LL
Sbjct: 261 NTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRK 320
Query: 106 DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
D I YN +I+ + +G A N M + P +TY++++DG R + +
Sbjct: 321 DDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLR-QTFVPSVATYTTMIDGYCRNRRID 379
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ ++ M ++P S++ K A+ I K ++ I+ T
Sbjct: 380 KALSVLSEMQITGVMP--------------SEISK---AKQILKSMLEDGIDPDIVT--- 419
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
AL EG + EA +S I+ + ++ C E + +V G
Sbjct: 420 -YSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYG 478
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + C G + ++ + +LD +D ++L+ C +D+A+
Sbjct: 479 HSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEAL 538
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
L K+ K D+ TY +LL G + G++ A+ + M + VV + ++ +++ L
Sbjct: 539 DLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGL 598
Query: 405 CHLKELRKAMKNHDEML-KMGHKPDEATYKQVISGFM 440
+ +++ A E++ K G D Y +++G++
Sbjct: 599 INEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYL 635
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 126/316 (39%), Gaps = 39/316 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P ++ N L+ + + + LY MVR G+ P+ T+ L+ L G ++ +
Sbjct: 657 PNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 716
Query: 105 LDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ GI+ ++++++I +S+K A N M R ++P TYS++++G
Sbjct: 717 LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLR-MSPSSKTYSAMINGLI 775
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKH--FLS------------------------------- 186
R + S ++ M++ L P H +++
Sbjct: 776 RKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADV 835
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I+ L GK A ++F + T ++ L KE ++ +A+ + L+
Sbjct: 836 AESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLM 895
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ V Y + LCK+ + + L ++ +G P + G
Sbjct: 896 ESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIM 955
Query: 307 KEVEELLSAVLDKGLL 322
+ EELL + ++GL+
Sbjct: 956 QNGEELLEDIEERGLI 971
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 36/251 (14%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++KA KE +V +A + + G + L ++ + + V LR+ +
Sbjct: 159 LVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHN 218
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAV------------------LDKGLLLDSFC 327
+ + + S C G++++ E++L + + KG + C
Sbjct: 219 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFKAALC 278
Query: 328 CSSLME-------YYCSNRQIDK---------AIALHIKIEKLKGSLDVATYDVLLDGLF 371
ME Y N IDK A L ++ K D TY+ L++G F
Sbjct: 279 VLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFF 338
Query: 372 KDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+G++ A +F++M ++ V S +++ ++ C + + KA+ EM G P E
Sbjct: 339 GEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEI 398
Query: 431 T-YKQVISGFM 440
+ KQ++ +
Sbjct: 399 SKAKQILKSML 409
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 173/400 (43%), Gaps = 59/400 (14%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P AC+ +L AL R + C G M R +P +T+
Sbjct: 133 GLLP--DACSLVLLALRRGISLPAPVC-SGLMSRLPSTPEAYTF---------------Y 174
Query: 102 LGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
L LLD+G+ ++N+++ + + G+ +A +EM R++ P T+++++ G R
Sbjct: 175 LQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM--RRSVQPTVVTFNTLISGMCR 232
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
L D + +++SD+G ++
Sbjct: 233 ARD---------------------LDAVDGLYKEMSDVG----------------VKPDV 255
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T G ++K + GR++ A+++++ + + G+ + ++ CKE L +D
Sbjct: 256 YTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQD 315
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ RG +P + + V C K E ++ + + GL D ++L++ C + +
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGK 375
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVI 399
+D A+ + K+ + + SLD TY L+ GL K GR +A R+ M E + ++++ +
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTM 435
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+ C +++ K EM G KP TY +++G
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 52/381 (13%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N L+ + R ++ LY M GV P+ +T+ + + CR+G+ E + +
Sbjct: 218 PTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277
Query: 105 L----DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
D+G+ ++V++ +ID + K+G+ A D +M R + P Y+++++G
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDM-RVRGVMPDLVAYNALVNGLC 336
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R + ++ IV M L P +I GK A I ++ ++++ L
Sbjct: 337 RARNLKAAESIVEEMKNAGLKPDKVTYTT--LIDGCCKDGKLDMAMDIKQKMAEKEVSLD 394
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+ T ++ LSK GR +A ++ + E + ++ Y ++ C++ + LL+
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ +G P + + + C G+ K + LL A+L+ G+
Sbjct: 455 EMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGV------------------ 496
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS--SSF 397
S D TY++LLDG K G++ + +EL+ F
Sbjct: 497 -----------------SPDDITYNILLDGQCKHGKVANS-------EELESSKGMVPDF 532
Query: 398 VIVVSRLCHLKELRKAMKNHD 418
+ S + L + + A HD
Sbjct: 533 AVYTSLISELAKKKPAKNYHD 553
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 17/311 (5%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
+DGL Y+ M G P V AL+ R + A ++ M GV+PN ++ +
Sbjct: 239 VDGL--YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL 296
Query: 89 AQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
C+ G + L VM YN +++ + + AA + EM N
Sbjct: 297 IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNA-G 355
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKT 201
L P TY++++DG + K +++ I M EK++ L Y +I LS G+
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEV----SLDEVTYTALISGLSKAGRP 411
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
AE + + + +E + T ++ A ++G VK ++ + +G Y
Sbjct: 412 VDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVI 471
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N LCK Q + LL ++ G P + + + QC GK EEL S+ KG+
Sbjct: 472 MNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGM 528
Query: 322 LLDSFCCSSLM 332
+ D +SL+
Sbjct: 529 VPDFAVYTSLI 539
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 41/215 (19%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + ++D + +G G+++Y+ MRV G +P + A NAL++ L R ++ A
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----------LDSGIYSSVM-- 114
+ M G+ P+K T++ + C+ GK ++ + + LD Y++++
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404
Query: 115 ----------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
Y +VID + +KGD F L EM N + P
Sbjct: 405 LSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQN-KGKKP 463
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
G TY+ I++G + + + +D ++ M+ + P
Sbjct: 464 GVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSP 498
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+S A+ +G + L+ L +G+ L + CS LM S + A ++++
Sbjct: 122 VSELAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPE---AYTFYLQLL 178
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK 412
+ + ++VL+ + G + A ++FD M+ + +F ++S +C ++L
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDA 238
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
+ EM +G KPD TY +I GF
Sbjct: 239 VDGLYKEMSDVGVKPDVYTYGALIKGF 265
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 190/466 (40%), Gaps = 44/466 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS ++ G F + ++R M G P L+D L + + L G +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVL-----GLLDSGIYSSVMYNLVIDFYSKKGDF 128
V GV + ++ + LC+ GK + L D+ + V Y ++ID K G+
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A L+EM ++++P T+SSI++G + + + M E+ + P G
Sbjct: 401 DGAEQVLSEM-EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGT 459
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +G+ A ++ + C E +E+ ++ L K G++++A ++ ++E
Sbjct: 460 -VIDGSFKCLGQEAALDVYHEMLC-EGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNE 517
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ + +Y ++ L K + +++ E+ +P A+ + F+ C GK KE
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKE 577
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E L + GL D ++++ + KA+ L +++ ++ TY L+
Sbjct: 578 AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV 637
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS--------------------------------- 395
GLF+ G +E+A + + M +S
Sbjct: 638 GLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCA 697
Query: 396 ---SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +V LC+ RKAM +EM G PD T+ +I G
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILG 743
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 188/454 (41%), Gaps = 47/454 (10%)
Query: 29 MDGLE-VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+DG E V M P V +++++ L ++ + A+ M G+ PN T+
Sbjct: 400 VDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGT 459
Query: 88 VA----QILCRSGKFEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
V + L + +V +L G+ + + + +++ K G A EM N R
Sbjct: 460 VIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREM-NER 518
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ Y++++DG + + ++ + EK LLP + + I L +GK+
Sbjct: 519 GVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVY--NVFINCLCMLGKSK 576
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
AE + ++ T M+ A S+EG+ +A+++ + + I Y +
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE-VEELLSAVLDKGL 321
L + E+ LL ++ G+ P ++ R V C +G+ + + E+ +++ GL
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLT-HRRVLQACSQGRRSDLILEIHEWMMNAGL 695
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIAL----------------------HIKIEKLKG--- 356
D ++L+ C N KA+ + H K L
Sbjct: 696 CADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFS 755
Query: 357 ----------SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
S +VAT++ LL GL GR+ E+ + + MK+ + S+ ++ I+V+
Sbjct: 756 TYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYG 815
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A++ + EM+ G P +TY +IS F
Sbjct: 816 KQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDF 849
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 140/333 (42%), Gaps = 19/333 (5%)
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-------GIYSSVMYNLVID 120
L M + GV + T + V LCR G+ + L + G V +N ++D
Sbjct: 123 ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVD 182
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K GD AF + E + + Y+S++ G R + + + +V M +
Sbjct: 183 GYCKVGDMETAF-AVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVE 241
Query: 181 PK---HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P + + +Y + D + EM+ K + + L ++ L K+GR
Sbjct: 242 PNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLS-----ALVGGLCKDGRFS 296
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA ++ + + G Y ++ L K + E LL +VV RG + + + +
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C +GK E +++ L + + L++ C +D A + ++E+ S
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+V T+ +++GL K G + +A DYM+E+K
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKAT---DYMREMK 446
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 145/330 (43%), Gaps = 3/330 (0%)
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+V YN+V+ +S++G A L EMC R + T +++L G R + + + +
Sbjct: 103 TVSYNVVMSGFSEQGGL-APEALLAEMCK-RGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
+MV + + G + ++ +G A + +R + + + ++ L
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G V A + + G+ Y F+ C+ + ++ L ++V +G +P +
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
LS V C G++ E L + G + L++ ++ +++++L ++
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY-MKELKVVSSSSFVIVVSRLCHLKEL 410
+D+ Y L+D L K+G+++EA +F + + + + ++ +++ LC +
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
A + EM + P+ T+ +I+G +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLV 430
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 178/446 (39%), Gaps = 19/446 (4%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
CEG + + +++ G ++R M G + L+D L++ +
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYS-SVMYNLVI 119
A + + + P+ +++ LC GK + L+ +G+ V YN +I
Sbjct: 542 AAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMI 601
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
S++G A LN M ++ P TYS+++ G E + ++ M
Sbjct: 602 AAQSREGKTAKALKLLNGMKRS-SIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + V+Q S ++ I + + + +++ L G ++A
Sbjct: 661 SPTSLT--HRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKA 718
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + +S RGI + A + K + ++ G P + +
Sbjct: 719 MVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGG 778
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL-KGSL 358
G+ E + +L+ + +G+ + L+ Y +Q +K A+ + E + KG L
Sbjct: 779 LESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY--GKQSNKVEAVRLYCEMVGKGFL 836
Query: 359 D-VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK---ELRKA 413
V+TY+ L+ K G M +A +F+ M+ V+ +S ++ I+VS L+ E+RK
Sbjct: 837 PKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKF 896
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+K +M + G P + T + F
Sbjct: 897 LK---DMKEKGFSPSKGTLSSISRAF 919
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 114/281 (40%), Gaps = 8/281 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M GF P +L A + L ++ M+ G+ + ++ + ++LC +G
Sbjct: 655 MSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGM 714
Query: 98 FEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ +L+ GI ++ +N +I + K G AF ++M ++P +T++
Sbjct: 715 TRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLY-HGISPNVATFN 773
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++L G + SD ++ M ++ + P + D ++ A ++
Sbjct: 774 TLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTY--DILVTGYGKQSNKVEAVRLYCEMV 831
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + T ++ SK G + +A ++++ + RG+ Y V+ K
Sbjct: 832 GKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGT 891
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
EV L+D+ E+G+ P LS + G E LL
Sbjct: 892 EVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/458 (19%), Positives = 186/458 (40%), Gaps = 51/458 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + ++ + M+ + P +CN LL + + + M+ G P FT+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 86 SLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG---DFGAAFDRLNE 137
+++ +C+ G E GL + + +V YN +ID + K G D F+ + +
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 138 MC-------------------------------NGRNLTPGFSTYSSILDGARRYEKTEV 166
MC G L P +YS+++D + +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDT 222
+ + M L+P N+Y L D +G A + +E T
Sbjct: 386 AIKFYVDMRRVGLVP------NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ L R+KEA +++ + G+ + Y A ++ K + LL ++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
RG P + F+ C K + + +++ + + G+ +S ++LM+ Y +
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS--FVIV 400
+ + L ++++L + V T+ VL+DGL K+ + +AV F+ + + +++ F +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ LC ++ A ++M++ G PD Y ++ G
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 181/422 (42%), Gaps = 49/422 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ G GLE YR M+ G P V + + L+DA ++ ++ A Y M R G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
+ PN++T++ + C+ G F + +L G+ ++ V Y +ID A
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK---LLPKHFLSGND 189
+ +M + + P ++Y++++ G + K + DR + L+ E K + P L G
Sbjct: 458 ELFGKM-DTAGVIPNLASYNALIHG---FVKAKNMDRALELLNELKGRGIKPDLLLYGT- 512
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
I L + K AA+++ + I+ ++ A K G E + + + E
Sbjct: 513 -FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
I V + ++ LCK ++ V+ K V
Sbjct: 572 DIEVTVVTFCVLIDGLCK--------------------------NKLVS--------KAV 597
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ D GL ++ +++++ C + Q++ A L ++ + D Y L+DG
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
FK G + EA+ + D M E+ + + ++ +V L H +L+KA +EM+ G PD
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 429 EA 430
E
Sbjct: 718 EV 719
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 172/401 (42%), Gaps = 37/401 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D + +G+ ++ Y MR G VP +L+DA + + A L M++
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 76 DGVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGA 130
GV N T++ + LC R + E + G +D+ I + YN +I + K +
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLL 180
A + LNE+ GR + P Y + + G EK E + ++ M E L+
Sbjct: 491 ALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+F SGN L D K E+ C ++ L K V +A+
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC------------VLIDGLCKNKLVSKAV 597
Query: 241 QIYHLIS-ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ IS + G+ + + A ++ LCK++Q E L +V++G +P + +
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
+G E L + + G+ LD +SL+ Q+ KA + +E++ G
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF---LEEMIGE-G 713
Query: 360 VATYDVLLDGLFKD----GRMEEAVRIFDYMKELKVVSSSS 396
+ +VL + K G ++EAV + Y+ + ++++S +
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN 754
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 132/310 (42%), Gaps = 4/310 (1%)
Query: 133 DRLNEMCNGRNL-TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
D + + + RN+ PGF + ++ E + + M ++ PK + +
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKT--RSCNGL 233
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ + + +GKT + FK T M+ + KEG V+ A ++ + RG+
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 293
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + ++ K + ++ ++ + P + + + C GK E
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ GL + S+L++ +C + +AI ++ + ++ + TY L+D
Sbjct: 354 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 372 KDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K G + +A R+ + M ++ V + ++ ++ LC + +++A + +M G P+ A
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 431 TYKQVISGFM 440
+Y +I GF+
Sbjct: 474 SYNALIHGFV 483
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 178/421 (42%), Gaps = 54/421 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+++ M P V ++ AL + A ++ M PN T++++
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC F+ ++ G+L+ G+ SV+ YN +ID Y KKG +A + L+ M N
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM-ESNNC 410
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+P TY+ ++ G R + + ++ M+E+KL P V+
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPN--------VV------------ 450
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
T ++ KEG + A ++ L++E G+ + Y F++
Sbjct: 451 -----------------TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK EE L + E+G + S + C GK + LL +L G + +
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553
Query: 325 SFCCSSLMEYYCSNRQIDKA-IALHIKIEK-LKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
S +SL++ YC + +A + + I I++ ++ + D TY +L+D L KD ++A +
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAAD--TYTILIDNLLKDDEFDQAHDM 611
Query: 383 FDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML-KMGHK---PDEATYKQVISG 438
FD M S V + + H +K+ + ++ KM K PD Y I
Sbjct: 612 FDQMLS---TGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 439 F 439
+
Sbjct: 669 Y 669
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 176/422 (41%), Gaps = 40/422 (9%)
Query: 23 SHKGLFMDGLEVYRMMR----VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
S LF+ LE+ R M + F + N LL L R I +Y M+ D V
Sbjct: 143 SENALFV--LEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMV 200
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
+PN FT + + C+ G ++++ +Y SK G + D
Sbjct: 201 TPNIFTLNTMVNGYCKLGN------VVEAELY-----------VSKIVQAGLSLDTF--- 240
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
TY+S++ G R + + ++ I M K L N +I +
Sbjct: 241 -----------TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTN--LIHGFCEA 287
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
+ A +F + ++ T ++ AL + GR EA+ ++ ++E+ Y
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTY 347
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ LC++ ++ +L ++E+G IP + + + C KG E+LS +
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
++ + L+ +C + I KA++L K+ + K +V TY++L+ G K+G +
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGS 467
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A ++ M E +V ++ + + LC + +A + + + G K +E Y +I
Sbjct: 468 AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527
Query: 438 GF 439
G+
Sbjct: 528 GY 529
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 168/421 (39%), Gaps = 21/421 (4%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F D ++ M G +P+V NAL+D ++ A + M + SPN T++
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419
Query: 88 VAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ CR + LL + + V YN++I K+GD G+A+ L+ M N
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLM-NES 478
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----M 198
L P TYS +D + E + + + EK + N+ + L D +
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG------IKANEVIYSTLIDGYCKV 532
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
GK + + T ++ KE KEA + ++ +R I Y
Sbjct: 533 GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ L K+ + ++ + ++ G P + F+ + C G+ K+ E L+ +
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNA 652
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
KG++ D+ + ++ Y ID A + ++ ++ TY L+ L + + +E
Sbjct: 653 KGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL-SNAKPKE 711
Query: 379 AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ V+S+ F R+ + + +M + G P+ TY + I+G
Sbjct: 712 VSSSSELSDLSSGVASNDFSNCWRRV----DYEFTLDLFGKMAEHGCAPNANTYGKFITG 767
Query: 439 F 439
Sbjct: 768 L 768
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/471 (19%), Positives = 183/471 (38%), Gaps = 51/471 (10%)
Query: 17 LVLDCYS------HKGLFMDGLE-VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
L L CY+ + L +D ++ VY M P + N +++ + + A
Sbjct: 167 LTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELY 226
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGI------YSSVM----- 114
+V+ G+S + FT++ + CR+ + + L + + G Y++++
Sbjct: 227 VSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCE 286
Query: 115 -------------------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
Y ++I + G A + EM ++ P
Sbjct: 287 ARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE-KHCQPNVH 345
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
TY+ ++ + + +I+ M+EK L+P + + +I G + +A I
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPS--VVTYNALIDGYCKKGLSASALEILS 403
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
T ++ + + +A+ + H + ER + Y ++ CKE
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
LL + E G +P S F+ + C +G +E L ++ +KG+ + S
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L++ YC ++ L K+ + TY+ L+DG K+ +EA + D M +
Sbjct: 524 TLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583
Query: 390 KV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ I++ L E +A D+ML G PD Y I +
Sbjct: 584 DIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 143/374 (38%), Gaps = 16/374 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+ +D +GL + ++ ++ G + L+D + ++ L M+
Sbjct: 488 SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGA 130
G PN T++ + C+ F+ L+D I + Y ++ID K +F
Sbjct: 548 AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ 607
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D ++M + + P Y++ + + + + ++ ++ M K ++P L
Sbjct: 608 AHDMFDQMLSTGS-HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLY--TL 664
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I G A I KR + E T C++K LS + + G
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSG 724
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ D F N + E L + E G P A +F+ C G +
Sbjct: 725 VASND-----FSNCW-RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAH 778
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI-ALHIKIEKLKGSLDVATYDVLLDG 369
L + +KG + +SL+ C +AI L I IE + + + +LL G
Sbjct: 779 RLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIEN-RHLPHLDSCKLLLCG 837
Query: 370 LFKDGRMEEAVRIF 383
L+ +G E+A R+F
Sbjct: 838 LYDEGNDEKAKRVF 851
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 143/377 (37%), Gaps = 14/377 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D Y G DG + M G VP N+L+D ++ + A L M++
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
+ P T++++ L + +F+ + D +G + V +Y I Y G
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + +M N + + P Y+ +D R+ + + I+ M E P ++
Sbjct: 643 AEVLICKM-NAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYS--C 699
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I+ LS+ + + +D C + + + ++ ++E G
Sbjct: 700 LIKHLSNAKPKEVSSSSELSDLSSGVA-SNDFSNCWRRV-----DYEFTLDLFGKMAEHG 753
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y F+ LCK E L + E+G P + + C G + E
Sbjct: 754 CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAI 813
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L +++ L C L+ +KA + + + + D + VL+DGL
Sbjct: 814 RWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGL 873
Query: 371 FKDGRMEEAVRIFDYMK 387
K G ++ +F M+
Sbjct: 874 LKKGLSDKCSDLFGIME 890
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 190/441 (43%), Gaps = 19/441 (4%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
R + + + +L + +GL D + +R P CN +L L R RL
Sbjct: 118 RSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVR 177
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFY 122
L+ + +PN FT+++V LC+ G+ L + V +N +ID Y
Sbjct: 178 RLFEQL----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY 233
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G+ + EM TY+++++ ++ + E + M + ++
Sbjct: 234 GKCGELDEVEQLVEEM-RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVM-A 291
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ ++ + +V G A +F + + L + T C++ K GR+ +AI +
Sbjct: 292 NVVTFSTFV-DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ +G+ + Y V+ LCKE + E +LR + + G + + +
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
++ LLS + +KGL LD +L++ C+ ++D+A +L K+++ +
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470
Query: 363 YDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
Y ++D FK G++ EA+ +I D + V+ ++ ++ LC + +A+ + +
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVI---TYCALIDGLCKAGSIDEAISHFN 527
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M +G P+ Y ++ G
Sbjct: 528 KMRDLGLDPNVQAYTALVDGL 548
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 192/467 (41%), Gaps = 44/467 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++V+D +G + ++ M+ G +P V N+L+D + E+ L M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDF 128
R G + T++ + C+ G+ E G + VM N+V +D + K+G
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +M R + TY+ ++DG + + + + ++ MV + + P + ++
Sbjct: 310 REAMKLFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV-PLNVVTYT 367
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L K AE + + + + ++ ++A+ + +
Sbjct: 368 -VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G+ + S Y A + LC H+ +E LL + E G P + + + + GK E
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L +LD G + +L++ C ID+AI+ K+ L +V Y L+D
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD 546
Query: 369 GLFKDGRMEEAVRIFD--------------------YMKE----------LKVVSSS--- 395
GL K+G + EAV++F+ Y+K+ K++ S
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 606
Query: 396 ---SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +S C+L + +A + EM+ G PD A Y +IS +
Sbjct: 607 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKY 653
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 171/389 (43%), Gaps = 8/389 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S +D + +GL + ++++ MRV G L+D + +
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLD-SGIYSS-VMYNLVID 120
A L MVR GV N T++++ LC+ K E VL +++ +G+ ++ ++Y +I
Sbjct: 347 AIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A L+EM N + L S Y +++ G K + + ++ M E L
Sbjct: 407 GHFMNKNSEKALGLLSEMKN-KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ GK A + ++ D + T ++ L K G + EAI
Sbjct: 466 PNYIIYTT--MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + G+ Y A V+ LCK E L ++V +G + + +
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+G + L + ++D GL LD FC + + +C+ + +A + ++ + D
Sbjct: 584 LKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 643
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
A Y+ L+ K G +EEA+ + D M+ +
Sbjct: 644 AVYNCLISKYQKLGNLEEAISLQDEMERV 672
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 172/410 (41%), Gaps = 11/410 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ G + M+ G + V + +DA ++ +R A L+ M G
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
++ N+FT++ + C++G+ + + LLD + V N+V +D K+ A
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDYV 191
D L M + Y++++ G + + S++ +GL+ E K +S +
Sbjct: 384 DVL-RMMEKAGVRANELLYTTLIHG---HFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
IQ L ++ K A+ + + + +E M+ A K G+V EAI + I + G
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y A ++ LCK +E + + G P + V C G E +
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + ++ KG+ LD ++L++ Y + A AL K+ LD+ Y + G
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEM 420
M EA +F M + + + ++S+ L L +A+ DEM
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 196/473 (41%), Gaps = 49/473 (10%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
D L +L + GL V+ + G P NAL+DAL + N I LA +
Sbjct: 145 DLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQ 204
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGD 127
M D ++FT++ + +C+ G + L L+ D G + +V Y ++I+ +
Sbjct: 205 MAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASR 264
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--HFL 185
AF M + + P +T +++ G R + ++ ++++ + HF+
Sbjct: 265 VDEAFGVFETMKDS-GVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFM 323
Query: 186 SGNDYVIQKLSDMGKTYAAEMI--FKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQI 242
D V+ L++ + A EM+ +R ++ ++ L K ++E +
Sbjct: 324 LACDTVLYCLAN--NSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDV 381
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEE---VCGLL--------------------- 278
+ ++ ++G+ Y A + VL K EE V G L
Sbjct: 382 FEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCR 441
Query: 279 -----------RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
RD+ RG +P + + + C G + +LL ++L+ GL D F
Sbjct: 442 AKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFT 501
Query: 328 CSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
SS+++ C ++ ++A+ ++ + + + Y++L+ L G + +V++ M+
Sbjct: 502 FSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQ 561
Query: 388 ELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + S+ ++ C + ++ KA K D M + G PD TY I
Sbjct: 562 KEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEAL 614
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 141/320 (44%), Gaps = 10/320 (3%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
+ ++V+ C + +V+ ++R G + A AL++ LY+ +YG
Sbjct: 359 NSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYG 418
Query: 72 AMVRDGVSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGIYSS-VMYNLVIDFYSKKG 126
++ DG+ N F+++++ CR+ E + G+ + V +N +I+ + K G
Sbjct: 419 QLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDG 478
Query: 127 DFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A L + NG L P T+SSI+DG + ++TE + M+E + P +
Sbjct: 479 AIDKARKLLESLLENG--LKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVI 536
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ +I+ L +G + + +R E I + +++ + +V++A +++
Sbjct: 537 Y--NILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDS 594
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+S G+ + Y AF+ L + + EE + + G P + + + +
Sbjct: 595 MSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEY 654
Query: 306 WKEVEELLSAVLDKGLLLDS 325
+E + ++ KG+ L+S
Sbjct: 655 VEEAQNIIERCRQKGISLNS 674
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 8/253 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G S + +++++C+ L + E +R M+V G VP + N L++ + I
Sbjct: 423 DGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDK 482
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIY-SSVMYNLVID 120
A L +++ +G+ P+ FT+S + LC+ + E L +++ GI ++V+YN++I
Sbjct: 483 ARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIR 542
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
GD + L M ++P +Y++++ R K E + ++ M L
Sbjct: 543 SLCTIGDVARSVKLLRRM-QKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN 601
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P ++ I+ LS+ G+ A+ +F C ++K L ++ V+EA
Sbjct: 602 PDNYTYS--AFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQ 659
Query: 241 QIYHLISERGITV 253
I ++GI++
Sbjct: 660 NIIERCRQKGISL 672
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 118/265 (44%), Gaps = 9/265 (3%)
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---LSGNDYVIQ 193
E+ + + G Y ++++ + E E DR+ G ++ L+ F + N +
Sbjct: 383 EILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRA 442
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
KL D +M + + T ++ K+G + +A ++ + E G+
Sbjct: 443 KLMDNASEAFRDMQVRGVVPNLV-----TFNTLINGHCKDGAIDKARKLLESLLENGLKP 497
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ + V+ LC+ + EE +++E G P A+ + + S C G +LL
Sbjct: 498 DIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLL 557
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ +G+ D++ ++L++ +C +++KA L + + + D TY ++ L +
Sbjct: 558 RRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFV 398
GR+EEA ++F Y E S S++
Sbjct: 618 GRLEEAKKMF-YSMEANGCSPDSYI 641
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 178/409 (43%), Gaps = 13/409 (3%)
Query: 40 VYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV---RDGVSPNKFTWSLVAQILCRSG 96
++G +P CN LL L + A LYG M+ R+G + ++ ++ + LC G
Sbjct: 232 LHGALPDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREG-GADDYSTCVMVRGLCLEG 290
Query: 97 KFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ E L+++ + +V YN++ID Y ++GD G L EM + + P TY
Sbjct: 291 RVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEM-EMKGIMPTVVTY 349
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+I+ R + ++ M E+ L P + + VI L A + +
Sbjct: 350 GAIIHWLGRKSDLTKIESLLWEMKERGLSPN--VQIYNTVIYALCKCRSASQALAVLNQM 407
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ + T ++ A +EG V+EA+++ R + Y ++ C +
Sbjct: 408 VASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEV 467
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
LL +++ RG+ P + L + G+ E + + ++ ++ D+ + L
Sbjct: 468 MVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVL 527
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ C R + A L +++ + K D Y L+DG + ++ +A +IF++M+E
Sbjct: 528 ISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGG 587
Query: 392 VSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ C + +A+ M K+G PDE TY +I G+
Sbjct: 588 YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGY 636
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 174/431 (40%), Gaps = 46/431 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y +G GL + M + G +P V A++ L R++++ L M
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGA 130
G+SPN ++ V LC+ L +L+ + S V +N +I + ++GD
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L E R L P +Y+ ++ G R E SD +V ++
Sbjct: 435 ALKLLREAIR-RELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMI--------------- 478
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
G+ + +++ T G ++ L G+V EA+ + ++ER
Sbjct: 479 ---------GRGHTPDVV--------------TLGALIHGLVVSGQVDEALMVREKMAER 515
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ + Y ++ LCK+ LL +++E+ P + + K +
Sbjct: 516 QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDA 575
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++ + +KG D +++++ YC + +++A+ + K+ D TY L+DG
Sbjct: 576 RKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDG 635
Query: 370 LFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K G ++ A+R D MK + ++ ++ C++ A M G P+
Sbjct: 636 YAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPN 695
Query: 429 EATYKQVISGF 439
Y +I
Sbjct: 696 VVHYTVLIGSL 706
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L ++ + + + + ERG++ Y + LCK + +L +
Sbjct: 348 TYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM 407
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V + P + + +A+ C +G +E +LL + + L + + L+ +C ++
Sbjct: 408 VASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEV 467
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIV 400
A L +++ + DV T L+ GL G+++EA+ + + M E +V+ ++ + ++
Sbjct: 468 MVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVL 527
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+S LC + L A EML+ +PD+ Y +I GF+
Sbjct: 528 ISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFI 567
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 134/353 (37%), Gaps = 25/353 (7%)
Query: 7 GRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
GR D ++L ++ G + L V M +P + N L+ L ++ +
Sbjct: 479 GRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLS 538
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVI 119
A L M+ V P+KF ++ + RS K + + G V YN +I
Sbjct: 539 AAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMI 598
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
Y K G A ++ M P TY++++DG + + + R + M++++
Sbjct: 599 KGYCKSGMMNEAVMCMSSM-RKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P + +I ++G T +AE++F E + ++ +L K+ + +A
Sbjct: 658 KPNIVTYAS--LICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQA 715
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLC---------------KEHQPEEVCGLLRDVVER 284
+ + + D+ + VN L + H+ + + + ++
Sbjct: 716 AAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISD 775
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
G P + + S C + EL + +KG L D SL+ + S
Sbjct: 776 GLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSS 828
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 171/417 (41%), Gaps = 20/417 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L M+V G P + N+L+ N I A L + G P+K ++ V
Sbjct: 285 ALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMG 344
Query: 91 ILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ K E V L++ + S V YN +I SK G A L E +
Sbjct: 345 FLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAED---- 400
Query: 145 TPGFST----YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
GF YS+I+ + + + + +V M + P + ++ +G+
Sbjct: 401 -KGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPD--VVTYTAIVDGFCRLGR 457
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A+ + ++ + + +L L G+ EA ++ ++ E T Y
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGV 517
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ +E + E C L R++VE+G+ P +E++ + S C K E ++ L L+KG
Sbjct: 518 VMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 577
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
++ ++++ +C ++ A+++ + D TY L D L K GR++EA
Sbjct: 578 CAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAA 637
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ M + + +F V+ R C + + D M+K KP Y VI
Sbjct: 638 ELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK--RKPFRTIYNHVI 692
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 166/428 (38%), Gaps = 43/428 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD S L V R+M G + A ++ + R ++R A + M + G
Sbjct: 202 LLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAG 261
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGAAF 132
V PN + +L + K E L L+ +GI V YN +I Y
Sbjct: 262 VEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCD-------- 313
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
LN + + L G + D Y ++G + ++K + +
Sbjct: 314 --LNRIEDALELIAGLPSKGCPPDKVSYYT-------VMGFLCKEKKIEQ---------- 354
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
++ K D + T ++ LSK G +A+ ++G
Sbjct: 355 ----------VKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFH 404
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y A V+ C++ + +E L+ D+ R P + + V C G+ E +++
Sbjct: 405 IDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKM 464
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L + G ++ ++L+ C + + +A + E+ + + TY V++ G +
Sbjct: 465 LQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRR 524
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+G++ EA + M E + + +++ LC +++ +A K +E L G +
Sbjct: 525 EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVN 584
Query: 432 YKQVISGF 439
+ VI GF
Sbjct: 585 FTTVIHGF 592
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
MI E +A++ +V+ + +G + ++ R M GF P N L+ +L
Sbjct: 499 MINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLC 558
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SV 113
+ ++ A + G + N ++ V C+ G E L +L+ S +V
Sbjct: 559 QNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAV 618
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
Y + D KKG A + + +M + + L P T+ S++ RY + D ++ L
Sbjct: 619 TYTALFDALGKKGRLDEAAELIVKMLS-KGLDPTPVTFRSVI---HRYCQWGRVDDMLNL 674
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ ++ + K F + ++VI+KL D G AE + + +L +TC ++++ K+
Sbjct: 675 L-DRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKK 733
Query: 234 GRVKEAIQIYHLISERGIT 252
G A ++ + R +T
Sbjct: 734 GVALSAYKVACQMFRRNLT 752
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 117/294 (39%), Gaps = 10/294 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V A++D R I A + M + G PN +++ + LC SGK +
Sbjct: 440 PDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREM 499
Query: 105 LDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
++ +++ Y +V+ + ++G A D EM + P + ++
Sbjct: 500 INVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE-KGFFPTPVEINLLIQSLC 558
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ +K + + + + K + VI +G AA + +
Sbjct: 559 QNQKVVEAKKYLEECLNKGCAIN--VVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T + AL K+GR+ EA ++ + +G+ + + ++ C+ + +++ LL
Sbjct: 617 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD 676
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+V+R P + + C G +E E+LL VL LD+ C LME
Sbjct: 677 RMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLME 728
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 182/428 (42%), Gaps = 55/428 (12%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+GL+ + LE ++ +G+ P+ NAL+ L ++ +A + M G ++ T
Sbjct: 182 QGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRST 241
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEM-CNG 141
AQ LC+ G++ L LL+ + +V+ +I + F A L+ M CN
Sbjct: 242 VGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN- 300
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ P TY ++L G + ++ RI+ +M+ + P L + ++ +
Sbjct: 301 -SYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS--LVHTYCNAEDY 357
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A +F R +TCGC G V Y F
Sbjct: 358 AYAYKLFNRM---------NTCGC----------------------PPGYVV----YNIF 382
Query: 262 VNVLC-KEHQPE-EVCGLLRDVVERGYIP-CAM---ELSRFVASQCGKGKWKEVEELLSA 315
+ +C +E P E+ L V E + C + + F CG GK+++ +++
Sbjct: 383 IGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKE 442
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ KG + D+ + ++ + C +++DKA L +++K+ + DV TY +L+D K G
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502
Query: 376 MEEAVRIFDYMKELKVVSSSSFVIVVSRLCHL----KELRKAMKNHDEMLKMGHKPDEAT 431
+E+A FD E++ S V+ + L H K+L +A M+ P+ T
Sbjct: 503 IEQAQSWFD---EMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAIT 559
Query: 432 YKQVISGF 439
Y +I G
Sbjct: 560 YSALIDGL 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 173/430 (40%), Gaps = 38/430 (8%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C G F ++ + M GFVP S ++ L + + A L+ M + GV+P
Sbjct: 426 CLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNP 485
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ +T++++ C++G E D +G +V+ Y ++ Y K A D
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIF 545
Query: 136 NEMCNGRNLTPGFSTYSSILDG---ARRYEKT-EVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ M G P TYS+++DG A +K EV +++G + + G D
Sbjct: 546 HRMV-GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIG--TSDNIESDFYFEGKD-- 600
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ I T G ++ L K +V +A + + G
Sbjct: 601 ---------------------TDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGC 639
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y A V+ CK + + + + + GY+P + + G+ +
Sbjct: 640 EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+LS +L + +++++ C + +KA+ L +EK S +V TY L+DGL
Sbjct: 700 VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLG 759
Query: 372 KDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE- 429
K G+++ + +F MK + ++ I+++ C L A DEM K H P
Sbjct: 760 KAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEM-KQTHWPKYL 818
Query: 430 ATYKQVISGF 439
Y+ + GF
Sbjct: 819 QGYRTTVQGF 828
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 184/462 (39%), Gaps = 54/462 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + GL + MR G P V ALL A + ++ A+ ++ MV
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
D PN T+S + LC++G+ + + I +S N+ DFY + D
Sbjct: 551 DACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSD--NIESDFYFEGKD-------- 600
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
++P TY ++++G + +K + ++ M+ P + D ++
Sbjct: 601 -----TDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVY--DALVDGF 653
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+G+ +A+ +F R T ++ + K+GR+ A+++ + +
Sbjct: 654 CKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNV 713
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y A V+ LCK + E+ LL + ++G P + + + GK EL
Sbjct: 714 VTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQ 773
Query: 316 VLDKGL--------LLDSFCCSS---------------------LMEYYCSNRQIDKAIA 346
+ KG +L + CC++ L Y + + K
Sbjct: 774 MKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFL 833
Query: 347 LHIKIEKLKGSLDVA----TYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFV 398
+ + + S D A Y +L+D K GR+E A+ + M E L + S
Sbjct: 834 ASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHT 893
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ LC ++ +A+ + EM + G PD + + ++ G +
Sbjct: 894 SLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLI 935
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 32/337 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+ CE DAL +D + G EV+ M G++P+V +L+D +++
Sbjct: 635 LAAGCEPNQIVYDAL---VDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKD 691
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-Y 115
+ LA + M++D +PN T++ + LC++G+ E L LL G +V+ Y
Sbjct: 692 GRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTY 751
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
+ID K G A + +M + P + TY +++ + + ++ M
Sbjct: 752 TALIDGLGKAGKVDAGLELFMQM-KTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEM- 809
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-----GCMLKAL 230
++ PK +L G +Q S K + A + E++E D G ++ +
Sbjct: 810 KQTHWPK-YLQGYRTTVQGFS---KRFLASLGLL----EEMESHDTAPIAPVYGMLIDSF 861
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
SK GR++ A++++ + E ++ + + + + LC Q EE L ++ RG +
Sbjct: 862 SKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIV 921
Query: 288 PCAMELSRFVASQCG---KGKWKEVEELLSAVLDKGL 321
P +LS FV G + KW E +L + +G+
Sbjct: 922 P---DLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 4/208 (1%)
Query: 235 RVKEAIQIYHLISERGITVRDSD--YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
R E + L +ER + + + Y A VL E LLR++ E
Sbjct: 112 RSPELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRL 171
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
L+ V C +G W E E L + D G + ++L++ S Q++ A + ++
Sbjct: 172 LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMS 231
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK 412
+D +T L K+GR +A+ + + +E + + ++S L +
Sbjct: 232 ASGFCMDRSTVGSFAQALCKEGRWGDALDLLE--REDFKLDTVLCTQMISGLMEASLFNE 289
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGFM 440
AM M + P+ TY+ +++GF+
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFL 317
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 26/409 (6%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + G P + N L + L N + ++R G P+ T++ + + LCR +
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
SV ++ID K G A + EM + + P +YSS++ G
Sbjct: 61 I-------------SVATCIIIDGLCKVGHEDEAKEIFEEM-KAQGMIPNVISYSSLVHG 106
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K E S R+ MV++ + P L + +I L GK A+ + + I
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPN--LVQFNVLIDILCKEGKVIEAKKLLEVTIQRGII 164
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
L T ++ K G + A +++ + +G + Y +N CK + EE L
Sbjct: 165 LDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNL 224
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ + G P S + GK + +L + G+ +DS ++ C
Sbjct: 225 YNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCK 284
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVS 393
N + +A+ L +++ LD +Y L+DGL K G++E A F + + VV+
Sbjct: 285 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 344
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKM---GHKPDEATYKQVISGF 439
+ I++ C ++++ KA ++M KM G PD TY ++ GF
Sbjct: 345 CN---IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGF 390
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 169/398 (42%), Gaps = 28/398 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC----- 68
L+++ +C + +GL + G++P + N L+ L R + I +A+C
Sbjct: 12 TLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDG 71
Query: 69 ------------LYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS 112
++ M G+ PN ++S + C +GK E + ++D G+ +
Sbjct: 72 LCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPN 131
Query: 113 -VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
V +N++ID K+G A +L E+ R + TY+S++DG + + ++
Sbjct: 132 LVQFNVLIDILCKEGKVIEA-KKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLF 190
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
M K +H +I + K A ++ T +L L
Sbjct: 191 LSMPSKGC--EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLL 248
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G+V +A +++ ++ GI+V Y F++ LCK E L ++ +
Sbjct: 249 QTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFE 308
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
SR + C GK + E + +GL + C+ ++ +C Q+DKA L K+
Sbjct: 309 SYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKM 368
Query: 352 EKLKG---SLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
EK++ + D+ TY+ LL G + ++EE V + M
Sbjct: 369 EKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK +E + ++ +G IP + S V C GK +E + L + ++D+G
Sbjct: 68 IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 127
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS-LDVATYDVLLDGLFKDGRMEEA 379
+ + + L++ C ++ +A L +++ +G LD+ TY+ L+DG K G + A
Sbjct: 128 VQPNLVQFNVLIDILCKEGKVIEAKKL-LEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++F M + S+ I+++ C + ++ +AM ++EM ++G +P+ TY +++G
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG 246
Query: 439 FM 440
+
Sbjct: 247 LL 248
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 130/350 (37%), Gaps = 79/350 (22%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S A +++D G + E++ M+ G +P V + ++L+ ++ + L+
Sbjct: 62 SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFN 121
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKG 126
MV GV PN ++++ ILC+ GK LL+ I ++ YN +ID + K G
Sbjct: 122 EMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIG 181
Query: 127 DFGAA-----------------------------------FDRLNEMCN-GRNLTPGFST 150
D +A + NEM G+ P T
Sbjct: 182 DLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKR--PNVKT 239
Query: 151 YSSILDGARRYEKTEVSDRIVGLM-------------------------VEKKLLPKHFL 185
YS++L G + K ++++ G+M E L
Sbjct: 240 YSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 299
Query: 186 SGN---DY-----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
S N D+ +I L GK A FK+ E ++ TC M+ + +V
Sbjct: 300 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVD 359
Query: 238 EAIQIYHLIS---ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
+A ++ + E G T Y + C+ ++ EEV LL + +R
Sbjct: 360 KANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 180/426 (42%), Gaps = 10/426 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD + L + VY MR G P V N L+ AL + + + A + M R G
Sbjct: 133 LLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKG 192
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
P++ + + + LC+ + + G+L YN V+ + F ++E
Sbjct: 193 CRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDE 252
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M + R L P Y+SI+ + + ++ I+ MV + +P + +++ D
Sbjct: 253 MVH-RGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPN--VQTFTVLVKGFFD 309
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
GK + A ++ E + +++ L G +K A+ ++ + +
Sbjct: 310 DGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRT 369
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ K + + D+ G P + + V C K + + E L+ +
Sbjct: 370 YSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMS 429
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ ++ ++L+ C + +A+ + + + + TY+ LL GLF++G E
Sbjct: 430 LENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCE 489
Query: 378 EAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+A+R+ M EL +VS ++ +S LC ++ +++AM M+ G +PD T+
Sbjct: 490 DALRMLTEMLNHGFELSLVSYNT---TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFN 546
Query: 434 QVISGF 439
+I +
Sbjct: 547 AIIHAY 552
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 149/345 (43%), Gaps = 10/345 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P A +++ A + E+R+A + MV +G PN T++++ + GK
Sbjct: 257 GLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDA 316
Query: 102 LGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR-NLTPGFSTYSSIL 155
LG+ + + S++ YN++I GD A + C G+ + P TYS+++
Sbjct: 317 LGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFS--CMGKSDCLPDVRTYSTLI 374
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
DG + +V+ I M P + N ++ L AE + + E
Sbjct: 375 DGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTN--MVDVLCKKVMFDQAENLIDKMSLEN 432
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ++++L GR A+ ++H + G D Y ++ L +E E+
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
+L +++ G+ + + ++ C KE LL ++ +G+ D+F ++++ Y
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAY 552
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
C + A + +++ + ++ Y L+ GL ++++A+
Sbjct: 553 CKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAM 597
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 114/288 (39%), Gaps = 8/288 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + ++++ H G L V+ M +P V + L+D + ++ +
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVID 120
A ++ M G PN ++ + +LC+ F+ L+D + +++ +N +I
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIR 445
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G G A + + M P TY+ +L G R E + R++ M+
Sbjct: 446 SLCDLGRAGRALNVFHGM-RRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGF- 503
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ L + I L M A ++ R + I+ T ++ A KEG V+ A
Sbjct: 504 -ELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAA 562
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + Y + ++ LC +H+ ++ L ++ G P
Sbjct: 563 WMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICP 610
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 187/436 (42%), Gaps = 21/436 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMV 74
SL D S + L M V RM + G P V + N ++ ++Q E+ A L+ MV
Sbjct: 204 SLCGDSRSQEALDM----VQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMV 259
Query: 75 RDGVSPNKFTWSLVAQILCRS---GKFEVVL-GLLDSGIYS-SVMYNLVIDFYSKKGDFG 129
+ GV P+ T++ + LC++ K E VL ++D G+ V YN +I YS G +
Sbjct: 260 QKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWK 319
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ +M + L P T+SS + ++ +++ ++ I M K +P +
Sbjct: 320 ESAKMFRKM-TSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD--IVSYS 376
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ + G+ +F D+ I ++ A +K G + EA+ ++ + +
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y ++ C+ + + ++ G P + C G +
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496
Query: 310 EELLSAVLDKGLLLDSFCC-SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+E +S ++ KGL + SS++ C ++ A + + + + T++ L+D
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLID 556
Query: 369 GLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
G G+ME+A + D M E VV++++ +VS C ++ + EML
Sbjct: 557 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNT---LVSGYCKSGKIDDGLILFREMLHKK 613
Query: 425 HKPDEATYKQVISGFM 440
KP TY V+ G +
Sbjct: 614 VKPTTVTYNIVLDGLL 629
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/393 (17%), Positives = 174/393 (44%), Gaps = 11/393 (2%)
Query: 53 LLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD------ 106
L+D R L ++R G+ + + LC + + + + +L
Sbjct: 130 LMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSEL 189
Query: 107 SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRNLTPGFSTYSSILDGARRYEKTE 165
S + ++ YN VI A D + M G +P ++++++ G + +
Sbjct: 190 SCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 249
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ + MV+K ++P + + ++ L AE + ++ D+ +E T
Sbjct: 250 KACNLFNEMVQKGVVPD--VGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNA 307
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ S G KE+ +++ ++ +G+ + +F++ LCK + ++ + + + +G
Sbjct: 308 IIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
++P + S + +G++ ++ L ++ DKG++ + C + L+ + +D+A+
Sbjct: 368 HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAM 427
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRL 404
+ +++ +V TY L+ + GR+ +A+ F M + + +++ + ++
Sbjct: 428 LVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGF 487
Query: 405 CHLKELRKAMKNHDEMLKMG-HKPDEATYKQVI 436
C +L KA + EM+ G H+P+ + +I
Sbjct: 488 CMHGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 190/449 (42%), Gaps = 24/449 (5%)
Query: 6 EGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
EG D +S V+ + +G ++ M G VP V N+++DAL + +
Sbjct: 224 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAM 283
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---------VVLGLL-DSGIYSSV 113
A + MV GV P+ T++ + SG ++ GL+ D+ +SS
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSF 343
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
M +L SK + + + + P +YS +L G + + +
Sbjct: 344 MSSLCKHGRSKDA------EEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHS 397
Query: 174 MVEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
M +K ++ H + + +I + G A ++F + + T ++ A +
Sbjct: 398 MADKGIVSNCHCI---NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCR 454
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG-YIPCAM 291
GR+ +A++ + + GI + Y++ ++ C + + +++ +G + P +
Sbjct: 455 MGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIV 514
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
S + S C +G+ + +++ + V+ G +SL++ YC +++KA + +
Sbjct: 515 FFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 574
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
+ DV T + L+ G K G++++ + +F M KV ++ ++ IV+ L
Sbjct: 575 VSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A K EM+ G D TYK ++ G
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYKILLKGL 663
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/464 (19%), Positives = 187/464 (40%), Gaps = 51/464 (10%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ YS G + + +++R M G +P ++ + +L + + A ++ M G
Sbjct: 308 IIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367
Query: 78 VSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAF 132
P+ ++S++ G+F + + D GI S+ N++I ++K+G A
Sbjct: 368 HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAM 427
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
EM G+ + P TYS+++ R + E +++ + +E H L +
Sbjct: 428 LVFTEM-QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI-H 485
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ + K + +EM+ K I ++ +L EGRV +A +++L+
Sbjct: 486 GFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSS----IIHSLCIEGRVMDAQDVFNLVIH 541
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK--- 305
G + + ++ C + E+ G+L +V G P + + V+ C GK
Sbjct: 542 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDD 601
Query: 306 ----WKEV----------------------------EELLSAVLDKGLLLDSFCCSSLME 333
++E+ +++ ++D G +D L++
Sbjct: 602 GLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 661
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C N D+AI L K+ + D+ + +++ L+K R EEA +F + +V
Sbjct: 662 GLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVP 721
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ S++ +++ L + +A M K G P +I
Sbjct: 722 NVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 168/432 (38%), Gaps = 83/432 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++L Y+ +G F D ++ M G V N L+ A ++ + A ++ M
Sbjct: 376 SILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQG 435
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGA 130
GV PN T+S + CR G+ E ++ GI ++ +Y+ +I + GD
Sbjct: 436 QGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVK 495
Query: 131 AFDRLNEMCN---------------------GR--------NLT------PGFSTYSSIL 155
A + ++EM + GR NL P T++S++
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLI 555
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
DG K E + ++ MV + P + N+ ++ GK ++F+ +K
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPD--VVTNNTLVSGYCKSGKIDDGLILFREMLHKK 613
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
++ T +L L + GR A +++H + + G V Y + LC+ +E
Sbjct: 614 VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 673
Query: 276 GLLRDVVERGYIPCAME---LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L + G + C + L+ + + + +E +L +A+ GL+
Sbjct: 674 TLFHKL---GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLV---------- 720
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+V+TY V++ L K+G +EEA +F M++
Sbjct: 721 -------------------------PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCA 755
Query: 393 SSSSFVIVVSRL 404
SS + + R+
Sbjct: 756 PSSRLLNDIIRM 767
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ L + R KEA++++ +IS+RGI+ + +N C+ + E +L
Sbjct: 235 TYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDF 294
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + G P S + C +GK +E +++ V GL LD+ ++LM C N +
Sbjct: 295 MKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGE 354
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVI 399
ID+A+ L +++ + D TY+V+L GL +GR EEA+++ D + E ++ S+ I
Sbjct: 355 IDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRI 414
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ LC EL KA+K M K G P AT+ +++
Sbjct: 415 ILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELV 451
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 136/305 (44%), Gaps = 10/305 (3%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++ ++N+++ + K GD +AF + EM P TYS+++D +++ + +
Sbjct: 196 NTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVEL 255
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF----KRACDEKIELQDDTCGCM 226
M+ K+ + + N +I G+ A+MI K C+ + +
Sbjct: 256 FEDMISKRGISPDPVIFN-VMINGFCRSGEVERAKMILDFMKKNGCNPNVY----NYSAL 310
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ KEG+++EA Q++ + + G+ + Y +N LC+ + +E LL ++
Sbjct: 311 MNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRC 370
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
A+ + + +G+ +E ++L +G+ L+ ++ C N +++KA+
Sbjct: 371 RADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVK 430
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLC 405
+ K AT++ L+ L + G E VR+ ++ + + S+ VV +C
Sbjct: 431 FLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESIC 490
Query: 406 HLKEL 410
++L
Sbjct: 491 KERKL 495
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 142/355 (40%), Gaps = 49/355 (13%)
Query: 32 LEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLA-SCLYGAMVRDGVSPNKFTWSLVA 89
+E++ +++V V P+++A + L+ L E+ LA L A + PN ++++
Sbjct: 145 MEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILV 204
Query: 90 QILCRSG----KFEVVLGLLDSGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRN 143
+ C++G F VV + SGI +S+ Y+ ++D + A + +M + R
Sbjct: 205 KHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRG 264
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA 203
++P ++ +++G R + E + I+ M + P + ++ GK
Sbjct: 265 ISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVY--NYSALMNGFCKEGKIQE 322
Query: 204 AEMIFKRACDEKIELQDDTCG-------------------------------------CM 226
A+ +F +K L+ DT G +
Sbjct: 323 AKQVFDEV--KKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVI 380
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
L+ LS EGR +EA+Q+ G+ + Y +N LC + E+ L + +RG
Sbjct: 381 LRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGI 440
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
P + V C G + +L L GL+ +++E C R++
Sbjct: 441 WPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKL 495
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 123/313 (39%), Gaps = 46/313 (14%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
S S ++DC + + +E++ M+ G P N +++ R E+ A +
Sbjct: 232 NSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMI 291
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSK 124
M ++G +PN + +S + C+ GK + + D +G+ +V Y +++ +
Sbjct: 292 LDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCR 351
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G+ A L EM R TY+ IL G
Sbjct: 352 NGEIDEAMKLLGEMKASRCRADAL-TYNVILRG--------------------------- 383
Query: 185 LSGNDYVIQKLSDMGKTYAA-EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
LS G++ A +M+ + C E + L + +L AL G +++A++
Sbjct: 384 ----------LSSEGRSEEALQMLDQWGC-EGVHLNKGSYRIILNALCCNGELEKAVKFL 432
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
++S+RGI + + V LC+ E +L + G IP V S C +
Sbjct: 433 SVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKE 492
Query: 304 GKWKEVEELLSAV 316
K V ELL ++
Sbjct: 493 RKLVHVFELLDSL 505
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 141/360 (39%), Gaps = 73/360 (20%)
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM--- 174
+ ++ D A D N+ + +TYS +LD R++K D I+ M
Sbjct: 60 TVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYE 119
Query: 175 ---VEKKL---LPKHF-------------------------LSGNDYVIQKLSDMGKTYA 203
++ L L +HF L+ + L D G+
Sbjct: 120 TCRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDL 179
Query: 204 AEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDS-DYYA 260
A + A + LQ +TC ++K K G + A ++ + GI+ +S Y
Sbjct: 180 ARKLLLYA-KHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYST 238
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ L + + +E L D++ + +G
Sbjct: 239 LMDCLFAQSRSKEAVELFEDMISK----------------------------------RG 264
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D + ++ +C + ++++A + ++K + +V Y L++G K+G+++EA
Sbjct: 265 ISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAK 324
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++FD +K+ + + + + +++ LC E+ +AMK EM + D TY ++ G
Sbjct: 325 QVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGL 384
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 170/381 (44%), Gaps = 12/381 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D G D +E++ M+ P +LD ++ + M
Sbjct: 303 TVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGA 130
DG +P+ T++++ LC++G + LLD G+ ++ YN +I +
Sbjct: 363 DGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDD 422
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL--LPKHFLSGN 188
A D N M + P TY +D Y K+ SD+ + + K+ + + ++ N
Sbjct: 423 ALDLFNNM-ETLGVVPTAYTYILFID---FYGKSGRSDKALETFEKMKIRGIAPNIVACN 478
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ L++MG+ A++IF R + T M+K SK G+V EAI++ +SE
Sbjct: 479 A-SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ +N L K + +E + + + P + + +A +G+ +
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EL +++ G ++ +++++ C N ++D A+ + K+ + DV T++ ++
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657
Query: 369 GLFKDGRMEEAVRIFDYMKEL 389
GL + R+ +A+ +F MK++
Sbjct: 658 GLVIEKRVSDAIWLFHQMKKM 678
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 187/433 (43%), Gaps = 18/433 (4%)
Query: 19 LDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
L+ YS+ GL + LE+YR M + G P++ +AL+ A ++ + L
Sbjct: 192 LNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSL 251
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSK 124
M G+ PN +T+++ ++L R+G+ + ++ + D G V+ Y ++ID
Sbjct: 252 LEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCT 311
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G A + +M + P TY ++LD M P
Sbjct: 312 AGKLDDAMELFVKM-KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPD-- 368
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ ++ L G A + + + T ++ L + R+ +A+ +++
Sbjct: 369 VITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFN 428
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ Y F++ K + ++ + RG P + + + S G
Sbjct: 429 NMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMG 488
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E + + + + GL DS + +M+ Y Q+D+AI L + + + D+ +
Sbjct: 489 RLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVIN 548
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L++ L+K GR++EA ++F +K++K+ + ++ +++ L ++++AM+ M
Sbjct: 549 SLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGN 608
Query: 424 GHKPDEATYKQVI 436
G P+ T+ ++
Sbjct: 609 GCPPNTITFNTIL 621
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 174/413 (42%), Gaps = 34/413 (8%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P V N L+ L ++ +++ A L+ +M +G PN T++ + LC++ + ++ L
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLAL 634
Query: 103 GLL----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+L D ++++++ LVI+ + D F ++ +M LTP T
Sbjct: 635 KMLYKMTTMNCMPDVLTFNTIIHGLVIE--KRVSDAIWLFHQMKKM-----LTPDCVTLC 687
Query: 153 SILDGARRYEKTEVSDRI-------VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
++L G + E + +I +G+ V+++ + + G + Q ++ +
Sbjct: 688 TLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFW-EDLMGG--ILTQAGTEKTILFGDR 744
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNV 264
++ R C + L ++K L K + A ++ E G+ Y +
Sbjct: 745 LVCGRVCKDGSVLMP-----IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEG 799
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
H E L ++ G P + + + GK E+ EL ++ +
Sbjct: 800 FLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPN 859
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + ++ + +DKA+ L + S TY LLDGL K GR+EEA +F+
Sbjct: 860 TITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFE 919
Query: 385 YMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M + +++ + I+++ ++ A + M++ G +PD +Y ++
Sbjct: 920 EMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLV 972
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 124/316 (39%), Gaps = 33/316 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
++ M+ G P V N LLDA + +I LY M+ PN T +++ L
Sbjct: 811 NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+S + L L Y+LV GDF +P TY
Sbjct: 871 VKSNSLDKALDLF---------YDLV------SGDF----------------SPTPCTYG 899
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+LDG + + E + + MV+ P + + + +I G A +FKR
Sbjct: 900 PLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY--NILINGFGKTGDVNTACELFKRMV 957
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
E I + ++ L + GRV +A+ + + + G+ + Y ++ L + H+ E
Sbjct: 958 REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L ++ RG P + + + G ++ +L + GL + F ++L+
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALI 1077
Query: 333 EYYCSNRQIDKAIALH 348
Y + D A A++
Sbjct: 1078 RGYSMSGNSDSAYAVY 1093
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 97/497 (19%), Positives = 192/497 (38%), Gaps = 107/497 (21%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
L +D Y G LE + M++ G P + ACNA L +L +R A ++ + +
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAA 131
G++P+ T++++ + ++G+ + + LL + ++ N +I+ K G A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 132 ---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
F RL +M L P TY++++ G + + + + + M P + ++ N
Sbjct: 564 WKMFCRLKDM----KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG-CPPNTITFN 618
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLI 246
+ + A +M++K + D T ++ L E RV +AI ++H +
Sbjct: 619 TILDCLCKNDEVDLALKMLYKMT---TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPE--EVCGLLRDVVERGYIPCAMELSRFVASQCG-- 302
K P+ +C LL VV+ G + A +++ + G
Sbjct: 676 K-------------------KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVY 716
Query: 303 --KGKWKEVEELLSAVLDKG------LLLDSFCCS----------SLMEYYCSNRQIDKA 344
+ W E+L+ +L + L D C +++ C ++Q A
Sbjct: 717 VDRRFW---EDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 345 IALHIKIEKLKG------------------------------------SLDVATYDVLLD 368
++ I+ K G + DV TY++LLD
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-----SFVIVVSRLCHLKELRKAMKNHDEMLKM 423
K G++ E +++ M + SS + I+++ L L KA+ +++
Sbjct: 834 AHGKSGKINELFELYEQM----ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889
Query: 424 GHKPDEATYKQVISGFM 440
P TY ++ G +
Sbjct: 890 DFSPTPCTYGPLLDGLL 906
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 130/325 (40%), Gaps = 10/325 (3%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN +I+ + + A++ EM N P TY+ +LD + K + M
Sbjct: 793 YNFLIEGFLGVHNDEMAWNLFTEMKNA-GCAPDVFTYNLLLDAHGKSGKINELFELYEQM 851
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ P ++ +I L A +F T G +L L K G
Sbjct: 852 ICSSCKPNTIT--HNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSG 909
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R++EA +++ + + G ++ Y +N K C L + +V G P +
Sbjct: 910 RLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYT 969
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
V C G+ + + GL LDS + +++ + +I++A+ L+ +++
Sbjct: 970 SLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSR 1029
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELR--- 411
+ D+ TY+ L+ L G +E+A ++++ EL+ + V + L +
Sbjct: 1030 GINPDLFTYNSLILNLGVAGMVEQAGKLYE---ELQFIGLEPNVFTYNALIRGYSMSGNS 1086
Query: 412 -KAMKNHDEMLKMGHKPDEATYKQV 435
A + M+ G P+ T+ Q+
Sbjct: 1087 DSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 7/219 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L + G +EA+++Y + G+ + A + K E V LL ++ G
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + G+ E ++ + D G D + L++ C+ ++D A+
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS----SFVIVV 401
L +K++ D TY +LD G + R+ ++ E++ + +F I+V
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLG---RVKEFWSEMEADGYAPDVITFTILV 376
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ LC + +A D M K G P+ TY +ISG +
Sbjct: 377 NALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLL 415
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD G + E++ M YG P + N L++ + ++ A L+ MVR+G
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIY-SSVMYNLVIDFYSKKGDFGAAF 132
+ P+ +++ + LC +G+ + L L +G+Y S+ YNL+ID + A
Sbjct: 961 IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020
Query: 133 DRLNEMCNGRNLTPGFSTYSSIL 155
+EM R + P TY+S++
Sbjct: 1021 TLYDEM-QSRGINPDLFTYNSLI 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L A K G++ E ++Y + + + L K + ++ L D+
Sbjct: 827 TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V + P + G+ +E +EL ++D G ++ + L+ + +
Sbjct: 887 VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDV 946
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIV 400
+ A L ++ + D+ +Y L+ L + GR+++A+ F+ +K+ + + S ++ ++
Sbjct: 947 NTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLM 1006
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ L + +A+ +DEM G PD TY +I
Sbjct: 1007 IDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 43/242 (17%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+LD + G + E+Y M P N ++ L + N + A L+ +V
Sbjct: 829 NLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVS 888
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGA 130
SP T+ + L +SG+ E L + + ++ +YN++I+ + K GD
Sbjct: 889 GDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNT 948
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M + P +Y+S +VG + E
Sbjct: 949 ACELFKRMVR-EGIRPDLKSYTS----------------LVGCLCEA------------- 978
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
G+ A F++ + L M+ L + R++EA+ +Y + RG
Sbjct: 979 --------GRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRG 1030
Query: 251 IT 252
I
Sbjct: 1031 IN 1032
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + ++ C G D L + ++ G A N ++D L R + I
Sbjct: 959 EGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEE 1018
Query: 66 ASCLYGAMVRDGVSPNKFTWSL------VAQILCRSGKF--EVVLGLLDSGIYSSVMYNL 117
A LY M G++P+ FT++ VA ++ ++GK E+ L+ +++ YN
Sbjct: 1019 ALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFT---YNA 1075
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+I YS G+ +A+ M G +P T++ +
Sbjct: 1076 LIRGYSMSGNSDSAYAVYKRMMVG-GCSPNTGTFAQL 1111
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 182/420 (43%), Gaps = 13/420 (3%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G D V R G V A N L+ R + A L G+M V+P+ +T
Sbjct: 88 RGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYT 144
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + ++LC G+ L LLD + + V Y ++++ K F A L+EM
Sbjct: 145 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM- 203
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ TP TY+ I++G R + + + ++ + P +++ L
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTV--SYTTLLKGLCASK 261
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ E +F ++ + T +++ + G V+ AIQ+ ++E +
Sbjct: 262 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCN 321
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N +CK+ + ++ L ++ G P + + + C +W + +ELL ++
Sbjct: 322 IVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRN 381
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ ++ + C I++AI L ++++ ++ V TY+ L++G G ++ A
Sbjct: 382 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSA 441
Query: 380 VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +F M ++ ++ +++ LC+ + L A + EML P+ T+ +++ F
Sbjct: 442 LELFRSMPCKP--NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 185/440 (42%), Gaps = 32/440 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++++ +G D ++ + YG P + LL L L+ M+
Sbjct: 216 NVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 275
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGA 130
PN+ T+ ++ + CR G E + +L ++ + N+VI+ K+G
Sbjct: 276 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDD 335
Query: 131 AFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
AF LN M CN P +Y+++L G R E+ + ++ MV P ++
Sbjct: 336 AFKFLNNMGSYGCN-----PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE-VT 389
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
N ++ L G A M+ ++ + + T ++ +G + A++++ +
Sbjct: 390 FNTFIC-ILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 448
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ T+ Y + LC + + L+ +++ R P + + V C KG
Sbjct: 449 PCKPNTI---TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFL 505
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG------SLDV 360
E EL+ +++ G C +L+ Y I K + +E L G S DV
Sbjct: 506 DEAIELVEQMMEHG------CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDV 559
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
T+ ++ L K+ R+EEA+++F +++ + + + ++ LC E+ A+
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAY 619
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G P+E+TY +I G
Sbjct: 620 MVSNGCMPNESTYIILIEGL 639
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 42/345 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V++ +G D + M YG P + +L L R A L MVR
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR 380
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGA 130
+ PN+ T++ ILC+ G E + L++ V YN +++ + +G +
Sbjct: 381 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS 440
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP--------- 181
A + M P TY+++L G E+ + + +V M+ + P
Sbjct: 441 ALELFRSM----PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496
Query: 182 -----KHFLSGNDYVIQKLSDMGKT---YAAEMIF---KRAC--DEKIELQDD------- 221
K FL +++++ + G T +F + C ++ +EL
Sbjct: 497 NFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVS 556
Query: 222 ----TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ LSKE RV+EAIQ++HL + G+ + Y + LCK H+ +
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDF 616
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L +V G +P + +G KE ++LLS + +G++
Sbjct: 617 LAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + L R +A + G + VE LSA D G D + C+ L+ C + A +
Sbjct: 41 PASARLRRLIAREDLAGAARLVE--LSASRD-GEAPDVYLCTKLIRNLCRRGRTSDAARV 97
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHL 407
E +DV Y+ L+ G + G ++ A R+ M + ++ ++ LC
Sbjct: 98 LRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--VAPDAYTYTPLIRVLCDR 155
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ A+ D+ML+ G +P+ TY ++
Sbjct: 156 GRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 187
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 172/421 (40%), Gaps = 57/421 (13%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P + NAL+ AL R+ ++R A MVR G P+ FT++ + CR+ + +V
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185
Query: 104 LLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG- 157
L D +V Y +I+ + + G A + E+ P T+++++ G
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ-----PDMYTHAALVKGL 240
Query: 158 --ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG-----KTYAA------ 204
ARR E+ GL Y++QK+ ++G + YAA
Sbjct: 241 CDARRGEE--------GL----------------YMLQKMKELGWRPATRAYAALVDLWC 276
Query: 205 --------EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
E + D + TC ++ A +EGR+ A++++ + +G
Sbjct: 277 REQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVW 336
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A V C + + LL + E G P + + + QC G + LL +
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
GL D + + L++ C ++D+A +L +E + T++ +++GL K G+
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ A + M + ++ + LC K R+ + DEML+ KP Y V
Sbjct: 457 DVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIV 516
Query: 436 I 436
I
Sbjct: 517 I 517
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 156/342 (45%), Gaps = 32/342 (9%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ YN +I ++ D A L+ M P T++S++ G R ++ +V+
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRS-GWRPDAFTFNSLILGYCRTQQLDVA--- 183
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC-----DEKIEL-----QD 220
+ L K L G S +YAA + + C DE +EL Q
Sbjct: 184 ------QDLFDKMPLRG-------FSQDAVSYAA--LIEGFCETGRVDEALELFRELEQP 228
Query: 221 D--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
D T ++K L R +E + + + E G Y A V++ C+E + EE +L
Sbjct: 229 DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKML 288
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ + G +PCA+ + V + C +G+ + ++ KG + + +++++ +C+
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
++ KA+AL ++ + DV TY++L+ G DG +E A R+ M+ + + ++
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC ++ +A D + G +P+ T+ VI+G
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 149/389 (38%), Gaps = 56/389 (14%)
Query: 20 DCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
D Y+H L +GL + + M+ G+ PA A AL+D R+ + A +
Sbjct: 229 DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKML 288
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKK 125
M +G+ P T + V CR G+ + + +S G +V YN ++ +
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348
Query: 126 GDFGAAFDRLNEM--CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
G A L++M C + P TY+ ++ G E + R++ +L+ +
Sbjct: 349 GKVYKAMALLDQMRECG---VEPDVVTYNLLIRGQCIDGHIESAFRLL------RLMEGN 399
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
L+ + Y L D AL K G+V EA ++
Sbjct: 400 GLAADQYTYNVLID-------------------------------ALCKTGKVDEACSLF 428
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ RGI + +N LCK + + C L +V G P S F+ + C
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKT 488
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+E + +L K + + + +++ R A + ++ L S DV TY
Sbjct: 489 KGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTY 548
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ +GR+ EA + MK+ ++
Sbjct: 549 TTSVRAYCNEGRLHEAENVVMEMKKGGII 577
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 177/455 (38%), Gaps = 60/455 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP C A+++A R+ + A ++ +M G PN +T++ + Q C GK
Sbjct: 295 GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKA 354
Query: 102 LGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LLD G+ V+ YNL+I G +AF RL + G L TY+ ++D
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF-RLLRLMEGNGLAADQYTYNVLID 413
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ K + + + + + + P VI L GK A ++
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT--VINGLCKGGKFDVACTFLEKMVSAGC 471
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K +E + + ++ + +Y ++ L KE
Sbjct: 472 APDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ +V G P + + V + C +G+ E E ++ + G+++D+ ++L++ +
Sbjct: 532 IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHT 591
Query: 337 SNRQIDKAIAL--------------------------------HIKIEKLKGSLDVA--- 361
S + D A+ + +K + ++++A
Sbjct: 592 SIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVF 651
Query: 362 ----------------TYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRL 404
Y +L+G ++ R++E + +MKE + ++ + +V+
Sbjct: 652 ELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCF 711
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L+ A M+ G P+ +Y+ ++SGF
Sbjct: 712 CKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGF 746
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 154/385 (40%), Gaps = 35/385 (9%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
DGLE YR +R P N +++ L + + +A MV G +P+ +T+S
Sbjct: 427 LFDGLE-YRGIR-----PNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480
Query: 88 VAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ LC++ L +D + S+V Y +VID K+ ++G A +M +
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVS-L 539
Query: 143 NLTPGFSTYSSIL----DGARRYEKTEV------SDRIVGLMVEKKLLPKHFLSG-NDYV 191
+P TY++ + + R +E V IV M L+ H G D+
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599
Query: 192 IQKLSDMGKTYAAEM-----IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ L M T A M F + ++ K + + +++ L+
Sbjct: 600 VTILKHM--TGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELM 657
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL-SRFVASQCGKGK 305
+ + Y A + +E + +EV L+ + E +P ++ + V C
Sbjct: 658 KKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDD-LPLNEDIYTSLVNCFCKLRM 716
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ + LL +++ G L + L+ + + Q D+A + + + + D + +
Sbjct: 717 YPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKI 776
Query: 366 LLDGLFKDGRME---EAVRIFDYMK 387
++DGL + G + + + I + MK
Sbjct: 777 IIDGLIRQGHPDMCHDMISILEQMK 801
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 184/438 (42%), Gaps = 10/438 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D ++ + ++ +S G + + + M+ +G V N ++D + A
Sbjct: 155 DRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEK 214
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYS 123
++ M+ V P+ ++ L+ CR G+ V L I + L+I +S
Sbjct: 215 VFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFS 274
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+KG AF + L P +SS+++G + + + ++ MV K P
Sbjct: 275 EKGFVNRAFWYFKKWVQ-MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNV 333
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I L G T A +F K + + T CM+ KE ++ A +
Sbjct: 334 YT--HTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ E+G+ + Y ++ CK L+ + + G+ P + + C
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
KG++ E +LL L GL D + L+ +C +A+A+ ++ K+ D+ T
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
Y+VL+ + ++EE+ ++F+ L ++ + ++ ++ C + A+K +M
Sbjct: 512 YNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMR 571
Query: 422 KMGHKPDEATYKQVISGF 439
G KPD TY +ISG
Sbjct: 572 DYGCKPDSITYGALISGL 589
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 152/361 (42%), Gaps = 29/361 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK---- 97
G+ + C ++ + + A + V+ G++PN +S + LC+ G
Sbjct: 258 GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQA 317
Query: 98 FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
FE++ ++ G +V + +ID KKG AF ++ N P TY+ +++
Sbjct: 318 FEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMIN 377
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPK----------HFLSGNDYVIQKLSD-MGKTYAAE 205
G + EK ++ ++ M E+ L+P H +GN +L D MGK
Sbjct: 378 GYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTP 437
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
IF T ++ L K+GR EA ++ + G+ Y ++
Sbjct: 438 NIF-------------TYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEF 484
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C++ ++ + + + G P + +A+ C + K +E E+L + GLL
Sbjct: 485 CRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTK 544
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+S++ YC + I AI K+ D TY L+ GL + +++EA ++++
Sbjct: 545 ETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYET 604
Query: 386 M 386
M
Sbjct: 605 M 605
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 146/358 (40%), Gaps = 43/358 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-DGVSPNKFT 84
G E+ M G+ P V AL+D L ++ A L+ +VR D PN +T
Sbjct: 312 GSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYT 371
Query: 85 WSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + C+ K +++ + + G+ + Y +ID + K G+FG A++ ++ M
Sbjct: 372 YTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM- 430
Query: 140 NGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIV--GLMVEK---KLLPKHFLSGND- 189
TP TY++I+DG R E ++ R + GL +K +L F D
Sbjct: 431 GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490
Query: 190 -----------------------YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
+I K +E +F+ A + +T M
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ ++G + AI+ +H + + G Y A ++ LC E + +E C L +++ G
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
PC + C +G +L L+K L + + ++L+ CS +++ A
Sbjct: 611 SPCEVTRVTLAYEYCKQGDSATAMIILER-LEKKLWIRT--VNTLIRKLCSEKKVGVA 665
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 163/409 (39%), Gaps = 47/409 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L++ +S KG ++ G P + ++L++ L + I+ A + MVR
Sbjct: 267 TLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVR 326
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVMYNL--VIDFYSKKGDFG 129
G PN +T + + LC+ G F + L L+ S Y +Y +I+ Y K+
Sbjct: 327 KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L M + L P +TY+ ++DG + + ++ LM ++ P F +
Sbjct: 387 RAEMLLIRM-KEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTY--N 443
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L G+ A + +R + T ++ ++ K+A+ I+ + +
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503
Query: 250 GITVRDSDYYAFVNVLCKEHQPEE-----------------------VCGLLRD------ 280
G+ Y + C++ + EE +CG RD
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSA 563
Query: 281 ------VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ + G P ++ ++ C + K E +L ++D GL +L
Sbjct: 564 IKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYE 623
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
YC +Q D A A+ I +E+L+ L + T + L+ L + ++ A F
Sbjct: 624 YC--KQGDSATAM-IILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFF 669
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/229 (16%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ ++ + CM+++ S+ G++KEA+ + + G+ ++ ++V +
Sbjct: 151 NDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVD 210
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ ++++R +P + V C G+ +V+ L ++++G +D+ C+ ++
Sbjct: 211 YAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMI 270
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+ +++A K ++ + ++ + L++GL K G +++A + + M ++
Sbjct: 271 STFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWK 330
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGF 439
+ + ++ LC KA + ++++ +KP+ TY +I+G+
Sbjct: 331 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGY 379
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 119/319 (37%), Gaps = 36/319 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++ + ++D + G F E+ +M GF P + NA++D L ++
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPE 457
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A L ++ G+ +K T++++ CR + L
Sbjct: 458 AYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQAL----------------------- 494
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A F R+ ++ L P TY+ ++ R +K E S+++ V LLP
Sbjct: 495 ----AIFSRMFKV----GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTK-- 544
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+I G +A F + D + T G ++ L E ++ EA Q+Y
Sbjct: 545 ETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYET 604
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ + G++ + CK+ +L + ++ +I L R C + K
Sbjct: 605 MIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIR---KLCSEKK 661
Query: 306 WKEVEELLSAVLDKGLLLD 324
+LDK L +D
Sbjct: 662 VGVAALFFHKLLDKDLNVD 680
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 198/462 (42%), Gaps = 54/462 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + GL + M G P+V ALL A + ++ AS ++ MV
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G +PN T+S + LC++G+ + + I +S N+ DFY + G D
Sbjct: 554 AGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS--DNVGSDFYFE----GEHTD-- 605
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
++ P TY +++DG + K + ++ +M P H + D +I
Sbjct: 606 -------SIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY--DALIDGF 656
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+GK A+ +F R T ++ A+ K+ R+ AI++ + E T
Sbjct: 657 CKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNV 716
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y A ++ LC+ + ++ LL + +RG P + + + GK +L +
Sbjct: 717 VTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQ 776
Query: 316 VLDKG---------LLLDSFCCSSLMEY-------------------YCSNRQ--IDKAI 345
++ +G +L++ C + L++ YCS Q K I
Sbjct: 777 MITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFI 836
Query: 346 ALHIKIEKLK--GSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFV 398
A +E+L+ G + +A Y +L+D K GR+E+A+ + M E L + S ++
Sbjct: 837 ASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYT 896
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ LC +L KA + + E+ + G P+ + + +I G +
Sbjct: 897 SLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLI 938
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 181/430 (42%), Gaps = 44/430 (10%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
+V C H G + LE ++ +G+ P+ + NAL+ L ++ + + M
Sbjct: 178 IVRKCCRH-GAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSEL 236
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDR 134
G +KFT AQ LC+ G++ L +++ + +V+ +I + F A
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISF 296
Query: 135 LNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
L+ M CN + P TY ++L G + ++ RI+ +M+ + P L N V
Sbjct: 297 LHRMRCN--SCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLF-NSLVHS 353
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ YA +++ + A CGC G V I I + S G +
Sbjct: 354 YCNARDYPYAYKLLNRMA----------GCGC------PPGYVVYNIFIGSICS--GEEL 395
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
D A + +E ++ + + + F CG GK+ + +++
Sbjct: 396 PSPDLLALAEKVYEE------------MLASSCVLNKVNTANFARCLCGMGKFDKAFQII 443
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ KG + D+ S ++ + C +++KA L +++ + DV TY +L+D K
Sbjct: 444 KLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKV 503
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHKPDE 429
G +E+A FD E++ V S V+ + L H K++ +A M+ G P+
Sbjct: 504 GLIEQARSWFD---EMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNT 560
Query: 430 ATYKQVISGF 439
TY ++ G
Sbjct: 561 ITYSALVDGL 570
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 24/331 (7%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
CE DAL +D + G + EV+ M G++P V +L+DA+++
Sbjct: 640 NGCEPNHIIYDAL---IDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRR 696
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNL 117
+ LA + M+ +PN T++ + LCR G+ + L LL G +V+ Y
Sbjct: 697 LDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTS 756
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
+ID K G + +M + P + TY +++ + + ++ M ++
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMIT-QGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-KQ 814
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
PK ++ G V+Q S K A+ + + + G ++ + SK GR++
Sbjct: 815 TYWPK-YVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLE 871
Query: 238 EAIQIY----HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
+A++++ + S IT +D+ Y + + LC Q E+ L ++ +G +P EL
Sbjct: 872 KALELHKEMMEVSSSLNITSKDT-YTSLIQALCLASQLEKAFELYSEITRKGVVP---EL 927
Query: 294 SRFVASQCG---KGKWKEVEELLSAVLDKGL 321
S F+ G KW E +L ++ D+G+
Sbjct: 928 SAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L K+ ++ +I ++ G S + + V+ C LL + G
Sbjct: 315 LLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCG 374
Query: 286 YIPCAMELSRFVASQCGKGKWKE------VEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
P + + F+ S C + E++ +L +L+ ++ C
Sbjct: 375 CPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 434
Query: 340 QIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
+ DKA + IK+ KG + D +TY ++ L + ++E+A +F MK + V+ ++
Sbjct: 435 KFDKAFQI-IKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTY 493
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
I++ C + + +A DEM +G P TY ++ ++
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/458 (19%), Positives = 186/458 (40%), Gaps = 51/458 (11%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + ++ + M+ + P +CN LL + + + M+ G P FT+
Sbjct: 74 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133
Query: 86 SLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG---DFGAAFDRLNE 137
+++ +C+ G E GL + + +V YN +ID + K G D F+ + +
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193
Query: 138 MC-------------------------------NGRNLTPGFSTYSSILDGARRYEKTEV 166
MC G L P +YS+++D + +
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDT 222
+ + M L+P N+Y L D +G A + +E T
Sbjct: 254 AIKFYVDMRRVGLVP------NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 307
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ L R+KEA +++ + G+ + Y A ++ K + LL ++
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
RG P + F+ C K + + +++ + + G+ +S ++LM+ Y +
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS--FVIV 400
+ + L ++++L + V T+ VL+DGL K+ + +AV F+ + + +++ F +
Sbjct: 428 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 487
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ LC ++ A ++M++ G PD Y ++ G
Sbjct: 488 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 181/421 (42%), Gaps = 49/421 (11%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ G GLE YR M+ G P V + + L+DA ++ ++ A Y M R G
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAF 132
+ PN++T++ + C+ G F + +L G+ ++ V Y +ID A
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 325
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK---LLPKHFLSGND 189
+ +M + + P ++Y++++ G + K + DR + L+ E K + P L G
Sbjct: 326 ELFGKM-DTAGVIPNLASYNALIHG---FVKAKNMDRALELLNELKGRGIKPDLLLYGT- 380
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
I L + K AA+++ + I+ ++ A K G E + + + E
Sbjct: 381 -FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 439
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
I V + ++ LCK ++ V+ K V
Sbjct: 440 DIEVTVVTFCVLIDGLCK--------------------------NKLVS--------KAV 465
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ D GL ++ +++++ C + Q++ A L ++ + D Y L+DG
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
FK G + EA+ + D M E+ + + ++ +V L H +L+KA +EM+ G PD
Sbjct: 526 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585
Query: 429 E 429
E
Sbjct: 586 E 586
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 172/401 (42%), Gaps = 37/401 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S ++D + +G+ ++ Y MR G VP +L+DA + + A L M++
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298
Query: 76 DGVSPNKFTWSLVAQILC---RSGKFEVVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGA 130
GV N T++ + LC R + E + G +D+ I + YN +I + K +
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE----------KKLL 180
A + LNE+ GR + P Y + + G EK E + ++ M E L+
Sbjct: 359 ALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+F SGN L D K E+ C ++ L K V +A+
Sbjct: 418 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC------------VLIDGLCKNKLVSKAV 465
Query: 241 QIYHLIS-ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ IS + G+ + + A ++ LCK++Q E L +V++G +P + +
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
+G E L + + G+ LD +SL+ Q+ KA + +E++ G
Sbjct: 526 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF---LEEMIGE-G 581
Query: 360 VATYDVLLDGLFKD----GRMEEAVRIFDYMKELKVVSSSS 396
+ +VL + K G ++EAV + Y+ + ++++S +
Sbjct: 582 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN 622
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 132/310 (42%), Gaps = 4/310 (1%)
Query: 133 DRLNEMCNGRNL-TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
D + + + RN+ PGF + ++ E + + M ++ PK + +
Sbjct: 44 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPK--TRSCNGL 101
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ + + +GKT + FK T M+ + KEG V+ A ++ + RG+
Sbjct: 102 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 161
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + ++ K + ++ ++ + P + + + C GK E
Sbjct: 162 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 221
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+ GL + S+L++ +C + +AI ++ + ++ + TY L+D
Sbjct: 222 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 281
Query: 372 KDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
K G + +A R+ + M ++ V + ++ ++ LC + +++A + +M G P+ A
Sbjct: 282 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 341
Query: 431 TYKQVISGFM 440
+Y +I GF+
Sbjct: 342 SYNALIHGFV 351
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 152/345 (44%), Gaps = 26/345 (7%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D + F + +++R M +G P V N+L+D +R + + A LY M
Sbjct: 286 FTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMT 345
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
R G+ P++FT S+V + LC G+ +V G+ + G+ ++ YN +ID Y + G+
Sbjct: 346 RLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLE 405
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A M + P +YSS++DG + K +++ I MV K + P +
Sbjct: 406 EALATCTRMTE-VGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPN--VVTYT 462
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I + G AA K + I T ++ L +E RV++A++ ++
Sbjct: 463 ALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRF--VMEHS 520
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GI + SD ++F + E +P IP + + G+ E
Sbjct: 521 GI--KYSDIHSFFSNFTTEEEP--------------LIPNSAIYMTLIYGLYLDGQHYEA 564
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+L S + G++ DSF + L+ C + A+ L+ + K+
Sbjct: 565 GKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 609
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 184/427 (43%), Gaps = 26/427 (6%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
++G E++ M P V +++ L + I A L+ AM G+ PN++
Sbjct: 190 YQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQY 249
Query: 84 TWSLVAQILCR----SGKFEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
T++++ C+ + F + LL+SG I ++V++ +ID + K F A D +M
Sbjct: 250 TYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDM 309
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ P Y+S++DGA R + + + M L P F V++ L D
Sbjct: 310 PR-FGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTC--SIVVRGLCDG 366
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G+ A + ++ + L ++ + G ++EA+ ++E G+ Y
Sbjct: 367 GQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSY 426
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
+ ++ K + + + ++V +G P + + + G +++
Sbjct: 427 SSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIE 486
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS-----------------LDVA 361
G+ ++ S L++ C ++ A+ ++ +K S + A
Sbjct: 487 NGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSA 546
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
Y L+ GL+ DG+ EA ++F YM++ ++S S ++ +++ C L + AM + +M
Sbjct: 547 IYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADM 606
Query: 421 LKMGHKP 427
+K+G KP
Sbjct: 607 MKIGVKP 613
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 33/167 (19%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + A + ++D Y G + L M G P V + ++L+D + ++++
Sbjct: 382 DGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQI 441
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A +Y MV G+ PN T Y +I ++K
Sbjct: 442 AMAIYTEMVAKGIEPNVVT------------------------------YTALIHGHAKN 471
Query: 126 GDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
G AAF EM NG ++P T S ++DG R + + + R V
Sbjct: 472 GGIDAAFRFHKEMIENG--ISPNAITVSVLVDGLCRENRVQDAVRFV 516
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
C L V ++ + W EL +L +G++ ++L+ + KA +
Sbjct: 146 CNAVLDGLVKARRSRCAW----ELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMW 201
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHL 407
++ + +V TY ++ L ++G + +A R+FD MKE + + ++ +++S C
Sbjct: 202 DQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQG 261
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A + E+L G P+ + +I GF
Sbjct: 262 DDVNSAFVLYQELLNSGLIPNAVVFTTLIDGF 293
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 157/373 (42%), Gaps = 9/373 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGD 127
M G P T++ + C+ G+++ L+D GI + V YN++ID K
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ L +M R + P TY+++++G + K + R+ M+ L P
Sbjct: 61 SAKGYLLLKKM-RKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTY- 118
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I D G A + + + + G +L LSK + A + I
Sbjct: 119 -NILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIR 177
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
G+ V Y A ++ LCK +E LL + + G P + S + C GK K
Sbjct: 178 MSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+E++ + GL + ++L+ C I +A + + + +D +VL+
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLI 297
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
L + GR+ EA +M + + +S +F +++ L + KA DEM+K+GH
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC 357
Query: 427 PDEATYKQVISGF 439
P TY ++ G
Sbjct: 358 PSHFTYGSLLKGL 370
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 161/362 (44%), Gaps = 14/362 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + A++ VLD YS G +++ M+ P+++ N LL ++ ++
Sbjct: 495 KGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLK 554
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVID 120
S Y M R G+SP+K T + LC+SG +V +L I + N++I
Sbjct: 555 CSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLIT 614
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ G AFD LN + N + P +TY++I G R S ++ M+E+ +
Sbjct: 615 NSCETDKMGKAFDLLN-IKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGIT 673
Query: 181 PKHFLSGNDYV--IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
P + Y+ I + MG A + + D M++ L++ G+V+E
Sbjct: 674 P----TSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEE 729
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + + ++ + + + +++LCK+ + E L + G + + ++
Sbjct: 730 AMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLIS 789
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR-QIDKAIALHI-KIEKLKG 356
C G L + ++GL ++ +L++ +N ++++ + +++ + EKL G
Sbjct: 790 GLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVYLEQFEKLVG 849
Query: 357 SL 358
L
Sbjct: 850 IL 851
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 161/385 (41%), Gaps = 13/385 (3%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLY 70
S +++L S KG + L + G + P +L D L++ + AS +Y
Sbjct: 430 SHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIY 489
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL---LDSG--IYSSVMYNLVIDFYSKK 125
M G++P+ + V R GK E V L + SG S YN+++ YSKK
Sbjct: 490 EEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKK 549
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D N M ++P T SI+ G + +V +++ M+ + L L
Sbjct: 550 KDLLKCSKFYNIMTR-MGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQ-L 607
Query: 186 SGNDYVIQ--KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ N + + MGK + I I +T + L++ ++E+ +
Sbjct: 608 TLNMLITNSCETDKMGKAFDLLNIKNLL---GIIPDVNTYNAIFTGLNRASALRESHLLL 664
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
H + ERGIT + Y + +N +C+ + L ++ G + S V
Sbjct: 665 HDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQC 724
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
GK +E +L +L K L+ ++LM C ++ +A+ L K+ LDV Y
Sbjct: 725 GKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAY 784
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKE 388
+VL+ GL DG A +++ MKE
Sbjct: 785 NVLISGLCADGDALAAFNLYEEMKE 809
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 174/419 (41%), Gaps = 16/419 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G + + MR P N L++ L ++ +I A+ ++ M+ +SPN+ T++++
Sbjct: 64 GYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILID 123
Query: 91 ILCRSGKFEVVLGLLD----SGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C G FE L LLD G+ V Y ++ SK F A L E +
Sbjct: 124 GHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIA-KSLMERIRMSGMV 182
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
G+ Y++++DG ++ + S +++ +M + P + +I GK A+
Sbjct: 183 VGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPD--IITFSVLINGFCKAGKIKNAK 240
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY---AFV 262
+ + + ++ K+G + EA + Y ++ G D DY+ +
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTG---HDVDYFICNVLI 297
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LC+ + E +R + P ++ + G + + ++ G
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC 357
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
F SL++ C + +A L K+ + ++D Y+ +L K G++ +AV +
Sbjct: 358 PSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVAL 417
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGH-KPDEATYKQVISGF 439
F M + V+ S ++ I+++ L ++ A+ ++ L G P++ Y + G
Sbjct: 418 FGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGL 476
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 162/400 (40%), Gaps = 18/400 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N +L ++ ++ A L+G MV+ V P+ T++++ L R GK L + +
Sbjct: 399 NTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALA 458
Query: 111 ------SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ VMY + D K G AA EM + + P +++LDG R K
Sbjct: 459 RGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEM-EHKGINPDTIAINAVLDGYSRMGKM 517
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E +++ M L P L+ + ++ S + I TC
Sbjct: 518 EKVEKLFIKMQSGSLTPS--LATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCH 575
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ L K G + ++ + V + C+ + + LL
Sbjct: 576 SIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLL 635
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G IP + +E LL +L++G+ S SL+ C I A
Sbjct: 636 GIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGA 695
Query: 345 IALHIKIEKLKGSLDVATYDV----LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVI 399
L ++E ++ V+++DV ++ GL + G++EEA+ + D M + +++ + ++F
Sbjct: 696 FRLKDEME----AIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTT 751
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC +L +A+K +M G K D Y +ISG
Sbjct: 752 LMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGL 791
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 159/399 (39%), Gaps = 52/399 (13%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
+R+ G V A A++D L + + + L M +DG SP+ T+S++ C++GK
Sbjct: 176 IRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGK 235
Query: 98 F----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
EV+ + +G+ + V+Y +I KKGD AF M + F
Sbjct: 236 IKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNV 295
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
I R E D + M L P D +I +G A +F
Sbjct: 296 LISSLCRAGRVAEAED-FMRHMSTIDLAPNSITF--DCIINGYGILGDALKAFSMF---- 348
Query: 213 DEKIEL----QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
DE I+L T G +LK L K G ++EA ++ + + V + Y ++ CK
Sbjct: 349 DEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKR 408
Query: 269 HQPEEVCGLLRDVVERGYIPCAME-------LSR---------FVASQCGKGKWKEVEEL 312
+ + L ++V+ +P + LSR F +G + +
Sbjct: 409 GKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVM 468
Query: 313 LSAVLD--------------------KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+++ D KG+ D+ +++++ Y +++K L IK++
Sbjct: 469 YTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQ 528
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
+ +ATY++LL G K + + + ++ M + +
Sbjct: 529 SGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGI 567
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 187/466 (40%), Gaps = 54/466 (11%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+GL D L V M + G C+ +L+A R R A + G + +
Sbjct: 121 RGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGN 180
Query: 85 WSLVAQILCRSGKFEVVLGLL----------DSGIYSSVMYNLVI-----DFYSKKGDFG 129
+LV +C G + + LL D Y++V+ L + D +
Sbjct: 181 CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV 240
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ L++M TP Y++I+DG + EV++ I+ M L P + +
Sbjct: 241 RVHEALSQMPE-HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN--VVCYN 297
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
V++ L + AE + E L D T ++ + G V I++ + E
Sbjct: 298 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y +N CKE +E LL+++ G P + + + C +W +
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+EL+S ++ +G L + ++L+ + C ++AI L ++ S D+ +Y ++DG
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDG 477
Query: 370 LFKDGRMEEA-----------------------------------VRIFDYMKELKVVSS 394
L K G+ EEA +++FD +++ V S
Sbjct: 478 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 537
Query: 395 SS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + V+S LC E +A+ M+ G P+E+TY +I G
Sbjct: 538 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 133/306 (43%), Gaps = 45/306 (14%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++D + GL +E+ M +G +P V +++ ++ + A L M
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFG 129
G PN ++++V + LCR+ ++ E++ ++ G + + V +N +I+F KKG
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAE 450
Query: 130 AAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + L +M NG +P +YS+++DG + KTE + ++ +M+ K + P + +
Sbjct: 451 QAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 508
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
M ALS+EGR + IQ++ I +
Sbjct: 509 -------------------------------------MASALSREGRTDKIIQMFDSIQD 531
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + Y A ++ LCK + + +V G +P + + +G +E
Sbjct: 532 ATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVRE 591
Query: 309 VEELLS 314
++LLS
Sbjct: 592 AQDLLS 597
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 192/418 (45%), Gaps = 15/418 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
++V ++ +G P V A NA++ + + + AS + M + G P+ T++++
Sbjct: 131 AIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C G+ ++ L ++D + + + Y ++I+ +G A L+EM + R L
Sbjct: 190 NFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLS-RGLR 248
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+ +++G + + + + + + + +S + +++ L + GK E
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAG--VSTYNILLRDLLNEGKWEYGE 306
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ + E T ++ AL ++G++ EA + ++ E+ + Y ++ L
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C+E + + L D++ G++P + + +AS C G E + + + G ++
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV--ATYDVLLDGLFKDGRMEEAVRIF 383
++L S+ DK AL + +E L +D TY+ L+ L +DG +++A+ +
Sbjct: 427 GSYNTLFGALWSSG--DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELL 484
Query: 384 DYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M E + + S+ V+ LC ++ + A++ M+ G P+E TY +I G
Sbjct: 485 VDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
++ RV E H ++ RD+++ +N CK + +E L+ +V RGY P +
Sbjct: 57 QQFRVNETKPTKH---DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVI 113
Query: 292 ELSRFVASQCGKGKWKEVEELLSA--VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
++ + G K++E+ + +L+K D F ++++ +C ++D A +
Sbjct: 114 LCTKLIK---GFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLD 170
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLK 408
+++K DV TY++L+ GR++ A+R+ D +K+ + ++ I++
Sbjct: 171 RMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQG 230
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ +AMK DEML G +PD TY V++G
Sbjct: 231 GIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 149/375 (39%), Gaps = 41/375 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEV 100
P V L++A Q I A L M+ G+ P+++T+++V +C+ G FE
Sbjct: 214 PTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF 273
Query: 101 VLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ + +G + V YN+++ +G + +++M + P TYS+++
Sbjct: 274 LSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDML-VKGCEPNPITYSTLITALC 332
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R K + + ++ +M EK L P + D +I L GK D IE
Sbjct: 333 RDGKIDEAKNVLKVMKEKALAPDGY--SYDPLISALCREGKV-----------DLAIEFL 379
Query: 220 DD-----------TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
DD + +L +L K G EA+ I+ + E G Y L
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
G++ +++ G P + + ++ C G + ELL + + C
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFES-----EKCQ 494
Query: 329 SSLMEY------YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+++ Y C ++I AI + + + TY +L+ G+ G +A+ +
Sbjct: 495 PTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554
Query: 383 FDYMKELKVVSSSSF 397
+ + + +S SF
Sbjct: 555 ANLLVNMDAISEDSF 569
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V++ +G+ E + G V VS N LL L + + L M+
Sbjct: 255 NVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLV 314
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
G PN T+S + LCR GK + +L ++ Y+ +I ++G
Sbjct: 315 KGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDL 374
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSIL 155
A + L++M +G +L P +Y+SIL
Sbjct: 375 AIEFLDDMISGGHL-PDILSYNSIL 398
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 35/139 (25%)
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C K+ E L ++++G D C+ L++ + + ++I+KAI + +EK G DV
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEK-HGKPDV 146
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ ++ G K R++ A ++ D M
Sbjct: 147 FAYNAVISGFCKADRVDHASKVL----------------------------------DRM 172
Query: 421 LKMGHKPDEATYKQVISGF 439
K G +PD TY +I F
Sbjct: 173 KKRGFEPDVVTYNILIGNF 191
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 190/441 (43%), Gaps = 19/441 (4%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
R + + + +L + +GL D + +R P CN +L L R RL
Sbjct: 118 RSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVR 177
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFY 122
L+ + +PN FT+++V LC+ G+ L + V +N +ID Y
Sbjct: 178 RLFEQL----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY 233
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
K G+ + EM TY+++++ ++ + E + M + ++
Sbjct: 234 GKCGELDEVEQLVEEM-RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVM-A 291
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ ++ + +V G A +F + + L + T C++ K GR+ +AI +
Sbjct: 292 NVVTFSTFV-DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ +G+ + Y V+ LCKE + E +LR + + G + + +
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
++ LLS + +KGL LD +L++ C+ ++D+A +L K+++ +
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470
Query: 363 YDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD 418
Y ++D FK G++ EA+ +I D + V+ ++ ++ LC + +A+ + +
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVI---TYCALIDGLCKAGSIDEAISHFN 527
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M +G P+ Y ++ G
Sbjct: 528 KMRDLGLDPNVQAYTALVDGL 548
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 192/467 (41%), Gaps = 44/467 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++V+D +G + ++ M+ G +P V N+L+D + E+ L M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDF 128
R G + T++ + C+ G+ E G + VM N+V +D + K+G
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +M R + TY+ ++DG + + + + ++ MV + + P + ++
Sbjct: 310 REAMKLFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV-PLNVVTYT 367
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ L K AE + + + + ++ ++A+ + +
Sbjct: 368 -VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G+ + S Y A + LC H+ +E LL + E G P + + + + GK E
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L +LD G + +L++ C ID+AI+ K+ L +V Y L+D
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD 546
Query: 369 GLFKDGRMEEAVRIFD--------------------YMKE----------LKVVSSS--- 395
GL K+G + EAV++F+ Y+K+ K++ S
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 606
Query: 396 ---SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +S C+L + +A + EM+ G PD A Y +IS +
Sbjct: 607 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKY 653
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 171/389 (43%), Gaps = 8/389 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + S +D + +GL + ++++ MRV G L+D + +
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLD-SGIYSS-VMYNLVID 120
A L MVR GV N T++++ LC+ K E VL +++ +G+ ++ ++Y +I
Sbjct: 347 AIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A L+EM N + L S Y +++ G K + + ++ M E L
Sbjct: 407 GHFMNKNSEKALGLLSEMKN-KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + ++ GK A + ++ D + T ++ L K G + EAI
Sbjct: 466 PNYIIYTT--MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + + G+ Y A V+ LCK E L ++V +G + + +
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+G + L + ++D GL LD FC + + +C+ + +A + ++ + D
Sbjct: 584 LKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 643
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
A Y+ L+ K G +EEA+ + D M+ +
Sbjct: 644 AVYNCLISKYQKLGNLEEAISLQDEMERV 672
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 172/410 (41%), Gaps = 11/410 (2%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ G + M+ G + V + +DA ++ +R A L+ M G
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAF 132
++ N+FT++ + C++G+ + + LLD + V N+V +D K+ A
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDYV 191
D L M + Y++++ G + + S++ +GL+ E K +S +
Sbjct: 384 DVL-RMMEKAGVRANELLYTTLIHG---HFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
IQ L ++ K A+ + + + +E M+ A K G+V EAI + I + G
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y A ++ LCK +E + + G P + V C G E +
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
L + ++ KG+ LD ++L++ Y + A AL K+ LD+ Y + G
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 372 KDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEM 420
M EA +F M + + + ++S+ L L +A+ DEM
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 37/417 (8%)
Query: 57 LYRQNEIRLASCLYGA------------MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
L + N A CL GA M+ G P+ T+S V LC + K E L
Sbjct: 416 LNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLL 475
Query: 105 LD----SGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ +GI SV Y ++ID + K G A + +EM N TP TY+S++
Sbjct: 476 FEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD-NCTPNVVTYTSLIHAYL 534
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA-------- 211
+ K ++++ +M+ + P + +I G+ A I+ R
Sbjct: 535 KARKVFDANKLFEMMLLEGSKPN--VVTYTALIDGHCKAGQIDKACQIYARMQGDIESSD 592
Query: 212 CDEKIELQDDTC--------GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
D +L D+ C G ++ L K RV+EA ++ +S G Y A ++
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALID 652
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
CK + E + + ERGY P S + S + + V ++LS +L+
Sbjct: 653 GFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTP 712
Query: 324 DSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ + +++ C + ++A L +K+E++ +V TY ++DG K G++E+ + ++
Sbjct: 713 NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELY 772
Query: 384 -DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
D + + ++ ++++ C L +A + DEM + ++Y+++I GF
Sbjct: 773 RDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF 829
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 175/429 (40%), Gaps = 59/429 (13%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G++ LE ++ +G+ + + NAL+ R +++ A ++ M G + T
Sbjct: 183 NGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCT 242
Query: 85 WSLVAQILCRSGKFEVVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
A LC++G+ L LL+ + +V YN ++ + F A D L+ M
Sbjct: 243 LGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM-RSI 301
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P TY +L G + RI+ +M+ + P + N V +Y
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMF-NSLVHAYCKSRDYSY 360
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A ++ FK+ CGC Q +L+ Y F+
Sbjct: 361 AYKL-FKKMIK---------CGC---------------QPGYLL-----------YNIFI 384
Query: 263 NVLCKEHQPEEVCGL-LRDVVERGY--------IPCAMELSRFVASQCGKGKWKEVEELL 313
+C EE+ G L ++ E+ Y + + +S F CG GK+ + E++
Sbjct: 385 GSICSN---EELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ KG + D S ++ + C +++KA L +++K V TY +L+D K
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHKPDE 429
G +++A FD M + V+ + L H +++ A K + ML G KP+
Sbjct: 502 GLIQQARNWFDEMLRDNCTPN---VVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558
Query: 430 ATYKQVISG 438
TY +I G
Sbjct: 559 VTYTALIDG 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 183/464 (39%), Gaps = 62/464 (13%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
++ M+ G VP+V L+D+ + I+ A + M+RD +PN T++ +
Sbjct: 475 LFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYL 534
Query: 94 RSGK-------FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRN 143
++ K FE++L L+ + V Y +ID + K G A + R+ +
Sbjct: 535 KARKVFDANKLFEMML--LEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSD 592
Query: 144 L------------TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ TP TY +++DG + + E + ++ M P + D +
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVY--DAL 650
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
I GK A+ +F + + T ++ +L KE R+ +++ + E
Sbjct: 651 IDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSC 710
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
T Y ++ LCK + EE L+ + E G P + + + GK ++ E
Sbjct: 711 TPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLE 770
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL-----------HIK-----IEKLK 355
L + KG + L+ + CS +D+A L HI IE
Sbjct: 771 LYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFN 830
Query: 356 -------GSLD----------VATYDVLLDGLFKDGRMEEAVRIFDYM---KELKVVSSS 395
G LD + Y +L+D K GR+E A+ + + + L V +
Sbjct: 831 REFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKY 890
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ L H ++ KA + + M+ P+ +T+ +I G
Sbjct: 891 LYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGL 934
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 176/432 (40%), Gaps = 71/432 (16%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV-------------- 74
D +++ MM + G P V AL+D + +I A +Y M
Sbjct: 540 FDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKL 599
Query: 75 --RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGD 127
D +PN T+ + LC++ + E LLD+ + ++Y+ +ID + K G
Sbjct: 600 DDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGK 659
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + +M + R P TYSS+++ + ++ ++ +++ M+E P +
Sbjct: 660 LENAQEVFVKM-SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYT 718
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ +I L +GKT A + + + T M+ K G++++ +++Y +
Sbjct: 719 D--MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMC 776
Query: 248 ERGITVRDSDYYAFVNVLC----------------KEHQPEEVC---------------- 275
+G Y +N C + + P +
Sbjct: 777 SKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITS 836
Query: 276 -GLLRDVVERGYIPCA----MELSRFVASQCGKGKWKEVEELLS----AVLDKGLLLDSF 326
GLL ++ E +P + + F+ + +G +EE+ S AV +K L
Sbjct: 837 IGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLY---- 892
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+SL+E ++DKA L+ + +++T+ L+ GL + G+ +EA+++ D +
Sbjct: 893 --TSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950
Query: 387 KELKVVSSSSFV 398
++ S+FV
Sbjct: 951 CQMVCHVCSNFV 962
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 161/359 (44%), Gaps = 30/359 (8%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ CE DAL +D + G + EV+ M G+ P + ++L+++L+++
Sbjct: 637 VNGCEPNQIVYDAL---IDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEK 693
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YN 116
+ L + M+ + +PN ++ + LC+ GK E ++L + + G Y +V+ Y
Sbjct: 694 RLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYT 753
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID + K G + +MC+ + P F TY +++ + + R++ M +
Sbjct: 754 AMIDGFGKIGKIEQCLELYRDMCS-KGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM-K 811
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+ P+H +S +I+ + T + ++ + + +E + ++ ++ K GR+
Sbjct: 812 QTYWPRH-ISSYRKIIEGFNREFIT-SIGLLDELSENESVPVE-SLYRILIDNFIKAGRL 868
Query: 237 KEAIQIYHLISER-GITVRDSDYY-AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
+ A+ + IS + V + Y + + L + ++ L ++ + +P ELS
Sbjct: 869 EGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVP---ELS 925
Query: 295 RFVASQCG---KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
FV G GKW+E +L ++ + CS+ + Y + +A+ L IK
Sbjct: 926 TFVHLIKGLTRVGKWQEALQLSDSICQ----MVCHVCSNFVNY-----KTTRALPLCIK 975
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
GC+ K + GR K +I ++ G + + V+ CK L + +++
Sbjct: 316 GCLGKG--QLGRCK---RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIK 370
Query: 284 RGYIPCAMELSRFVASQC------GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
G P + + F+ S C G + E+ S +LD G++L+ S+ C
Sbjct: 371 CGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCG 430
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
+ DKA + ++ D +TY ++ L ++E+A +F+ MK+ +V S +
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYT 490
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ I++ C +++A DEML+ P+ TY +I ++
Sbjct: 491 YTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYL 534
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 172/412 (41%), Gaps = 26/412 (6%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
F P N L+ + ++ A ++ M G+ PN T + + LC G+ L
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87
Query: 103 GL---LDSGIY--SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
L + +G + +S +N+++ + G A L +M + + TY+ +L G
Sbjct: 88 KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDM-RKSSSSVATGTYNLVLKG 146
Query: 158 -------ARRYEKT-EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
A R E+ E + VE L H L + LSD G+ A +F
Sbjct: 147 LCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL------LSALSDSGRMAEAHALFS 200
Query: 210 R-ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
C I T ++ K G+ EA + I + G Y +N CK
Sbjct: 201 AMTCSPDIM----TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL 256
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ EE + ++E +P A+ + +A C G ++ +L + + G
Sbjct: 257 DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 316
Query: 329 SSLMEYYCSNRQ-IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
++L++ C R + A+ L K+E + + TY+ L+ G R+ EA++ FD M+
Sbjct: 317 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME 376
Query: 388 ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ I++ LC ++ +++A K ++M G+ P TY +I+GF
Sbjct: 377 GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGF 428
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 167/391 (42%), Gaps = 17/391 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+E ++ M+ G P + + + LL AL + A L+ AM SP+ T++++
Sbjct: 159 QAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLM 215
Query: 90 QILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
C+ G+ ++ +L +G +V Y+++I+ Y K A++ +M N
Sbjct: 216 DGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES-NC 274
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+++++ G + E + ++ M EK ++ N + G Y A
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+F + + T +++ R+ EA+Q + + E Y ++
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDG 392
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK + +E L D+ GY P + + C G+ K + G +
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452
Query: 325 SFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ ++L++ C + + + L H+ E K DV TY+ L+ GL R+E+A R+
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKP--DVITYNCLISGLCSANRVEDAQRL 510
Query: 383 FDYMKELKVVSSSSFVIVVSRLCHLKELRKA 413
FD M V++ +F+I LC K++ +A
Sbjct: 511 FDGMACAPNVTTFNFLI--RGLCAQKKVEEA 539
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 145/378 (38%), Gaps = 54/378 (14%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y G + + + + G+ P V + +++ + +++ A ++ M+
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKK-GDFG 129
PN T++ + C++G E + L G ++ V YN +ID KK G
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A D N++ G LTP TY+S++ G ARR +
Sbjct: 332 TAVDLFNKL-EGAGLTPTIVTYNSLIQGFCDARRLSE----------------------- 367
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+Q +M A +I T ++ L K R+KEA + +
Sbjct: 368 ----AMQYFDEMEGKCAPNVI--------------TYSILIDGLCKVRRMKEAAKTLEDM 409
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G T Y +N CK + + + G P + + + C +
Sbjct: 410 KAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERA 469
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ LL + +G D + L+ CS +++ A L + + + +V T++ L
Sbjct: 470 NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL---FDGMACAPNVTTFNFL 526
Query: 367 LDGLFKDGRMEEAVRIFD 384
+ GL ++EEA I D
Sbjct: 527 IRGLCAQKKVEEARNILD 544
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 172/397 (43%), Gaps = 15/397 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
GR + LSL + Y G F G E+ M+ YG P + A +D L + ++ A
Sbjct: 266 GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEA 325
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-------IYSSVMYNLVI 119
+ + + G+S + + S V C+ GK E + L+ S +YSS + N+
Sbjct: 326 TSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNIC- 384
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
GD A E+ L P Y++++DG +T+ + + G +++
Sbjct: 385 ----STGDMLRASTIFQEIFE-LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P L+ + +I S G AE +F+ E ++L T ++ K ++ +
Sbjct: 440 PPS--LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + GI+ + Y ++ + +E ++ +++ RG++P + + +
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
+G ++E L + D + D CS+L+ YC ++++KAI L K+ D
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
V Y+ L+ G G +E+A + M + ++ + S
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G +KEA + + GI+ + ++ CK +PEE L+ R P
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PN 372
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
S F+++ C G + + + GLL D C +++++ YC+ + DKA
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLC 405
+ K + T +L+ + G + +A +F MK +L VV+ ++ + +
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT- 491
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+L K + DEM G PD ATY +I
Sbjct: 492 --HQLNKVFELIDEMRSAGISPDVATYNILI 520
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+E +V A+++ + + + GI + + + + H E + ++ RG A
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAA 272
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
LS F+ C G + + ELL + G+ D + ++ C + +A ++ K+
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
+ S D + ++DG K G+ EEA++ I + + SSF +S +C ++
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSF---LSNICSTGDM 389
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A E+ ++G PD Y +I G+
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGY 418
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 189/434 (43%), Gaps = 18/434 (4%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H G V + +G+ P L+ L + +++ A + +
Sbjct: 100 TLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKL 159
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL---DSGIYSS--VMYNLVIDFYSKKGDF 128
+ G ++ ++ + +C+ G+ + LL D + VMYN +ID K+
Sbjct: 160 LAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLV 219
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + +EM + + ++ TYS+I+ G K + + MV K + P ++
Sbjct: 220 SEACNLFSEM-SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIY-- 276
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ L GK A+ + ++ T ++ +K +++ +
Sbjct: 277 NTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGL 328
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+T Y +N LCK + EE L +++ ++ +P + + + C G+
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L+ + D+G + +SL+ C N Q+DKAIAL K++ D+ T ++LL
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Query: 369 GLF-KDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GL K R++ A +F D + + + ++ I++ C L +A +M G
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCS 508
Query: 427 PDEATYKQVISGFM 440
P+ T+K +I +
Sbjct: 509 PNAITFKIIICALL 522
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 17/345 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N ++D L ++ + A L+ M G+S N T+S + C GK LG
Sbjct: 201 PNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGF 260
Query: 105 LDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
L+ + ++ +YN ++D K+G A + L + L P TY++++DG
Sbjct: 261 LNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK-TCLKPNVITYNTLIDGYA 319
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
++ V GLM + P + + +I +L + + A ++K + +
Sbjct: 320 KHVFNAV-----GLM---GVTPD--VWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPN 369
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T ++ L K GR+ A + + +RG Y + +N LCK Q ++ L+
Sbjct: 370 TVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALIN 429
Query: 280 DVVERGYIPCAMELSRFVASQCGKGK-WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ ++G P L+ + KGK K + L +LDKG + + + ++ +C
Sbjct: 430 KMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKE 489
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+D+A AL K+E S + T+ +++ L + G ++A ++
Sbjct: 490 GLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLL 534
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 139/322 (43%), Gaps = 11/322 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + S ++ + G + L M + P V N L+DAL+++ ++
Sbjct: 230 SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKV 289
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
+ A + +V+ + PN T++ + + V L + ++S YN++I+
Sbjct: 290 KEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWS---YNIMINRLC 346
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K A + EM + +N+ P TY+S++DG + + + ++ M ++ H
Sbjct: 347 KIKRVEEALNLYKEM-HQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG----H 401
Query: 184 FLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG-RVKEAI 240
+ Y +I L G+ A + + D+ I+ T +L L +G R+K A
Sbjct: 402 HANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQ 461
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + ++G Y + CKE +E L + + G P A+ + +
Sbjct: 462 GLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICAL 521
Query: 301 CGKGKWKEVEELLSAVLDKGLL 322
KG+ + E+LL ++ +GLL
Sbjct: 522 LEKGETDKAEKLLCEMIARGLL 543
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 28/439 (6%)
Query: 21 CYSH--KGLFMDGLEVYRMMRVY-------GFVPAVSACNALLDALYRQNEIRLASCLYG 71
CY+ G F G E ++MRV+ G P ++ N +LD L + + ++
Sbjct: 230 CYNALLGGCFKAG-EFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWE 288
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKG 126
MV + + P+ T+ ++ LCRSG + V ++ +G + + MYN ++ + + G
Sbjct: 289 RMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAG 348
Query: 127 DFGAAFDRLNE--MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL--LPK 182
A+ + RNL + D E E+ D ++EK + +P
Sbjct: 349 RVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD-----LLEKDVACIPD 403
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
G +I L G A IF+ A +L + M+ L GR+ +A+++
Sbjct: 404 TVTFGT--LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
Y + + G Y A ++ C+ ++ + + + + G P + + + C
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
K++E + +++ G D SL+ S+++ID A+++ +I +DV
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEM 420
+++L+ GL G+++EA+ +F MKE K + ++ ++ L + KA +
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 421 LKMGHKPDEATYKQVISGF 439
+ G +PD +Y I G
Sbjct: 642 TEDGLEPDIISYNTRIKGL 660
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 201/471 (42%), Gaps = 70/471 (14%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMM-RVYGFVPAVSACNALLDALYRQNEIR-- 64
R S+S AL +VL +S + L+ +R + + G P + + NALLDA R
Sbjct: 80 RFSESAAL-VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDA 138
Query: 65 ---LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----------GIYS 111
AS +GA R ++PN T+++V + LC G + + L DS YS
Sbjct: 139 DAFFASLSHGAFGRR-IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYS 197
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKT-EVS 167
++M L +K+ A D L+EM + P Y+++L G A +EK V
Sbjct: 198 TLMCGL-----AKQDRLDHALDLLDEMPRS-GVQPDVVCYNALLGGCFKAGEFEKVMRVW 251
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
D++V K + L+ + ++ L G+ +++R ++ T G ++
Sbjct: 252 DKLV-----KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV---------CGL- 277
L + G V A ++Y I + G+ + + Y + V C+ + +E GL
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366
Query: 278 --------LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
++ + + G + A+EL W +E+ D + D+
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIEL------------WDLLEK------DVACIPDTVTFG 408
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KE 388
+L+ C N +KA + + LDV +Y +++GL GR+ +AV++++ M K+
Sbjct: 409 TLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S + ++S C + A++ + +M G P TY +I G
Sbjct: 469 GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGL 519
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/428 (18%), Positives = 186/428 (43%), Gaps = 10/428 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++LD G F + EV+ M P V L+ L R ++ A+ +Y +++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV----MYNLVIDFYSKKGDFGAA 131
G+ + ++ + + C++G+ + DS ++ + YN++I G A
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEA 387
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDY 190
+ + + P T+ +++ G + +++ + E ++ K +
Sbjct: 388 IELWDLLEKDVACIPDTVTFGTLIHG---LCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L ++G+ A ++++ + + ++ + R +A++IY +++ G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ LCK + +E + R++VE G+ P + K +
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI-EKLKGSLDVATYDVLLDG 369
+ +L KGL +D + L+ CS ++D+A+ + + EK ++ TY+ L+DG
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L++ G +++A ++ + E + S+ + LC + + ++ DE+L G P
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPT 684
Query: 429 EATYKQVI 436
T+ ++
Sbjct: 685 VITWNILV 692
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 170/406 (41%), Gaps = 12/406 (2%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P + N +L +L + ++ A L+ ++ R V+P+ T+S + L + + + L
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213
Query: 103 GLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
LLD SG+ V+ YN ++ K G+F +++ P +TY+ +LDG
Sbjct: 214 DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
++ + + + MV L P G +I L G A ++ +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYG--ILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ ++K + GRV+EA + + G+ + Y + L +E L
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRT-YNIMIKGLFDSGMVDEAIEL 390
Query: 278 LRDVVERGY--IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
D++E+ IP + + C G + + G LD F SS++
Sbjct: 391 W-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C+ ++ A+ ++ K++K + Y+ L+ G + R +AVRI+ M + +
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ ++ LC ++ ++A EM++ G PD TY +I G
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 172/397 (43%), Gaps = 15/397 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
GR + LSL + Y G F G E+ M+ YG P + A +D L + ++ A
Sbjct: 266 GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEA 325
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-------IYSSVMYNLVI 119
+ + + G+S + + S V C+ GK E + L+ S +YSS + N+
Sbjct: 326 TSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNIC- 384
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
GD A E+ L P Y++++DG +T+ + + G +++
Sbjct: 385 ----STGDMLRASTIFQEIFE-LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P L+ + +I S G AE +F+ E ++L T ++ K ++ +
Sbjct: 440 PPS--LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + GI+ + Y ++ + +E ++ +++ RG++P + + +
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
+G ++E L + D + D CS+L+ YC ++++KAI L K+ D
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
V Y+ L+ G G +E+A + M + ++ + S
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G +KEA + + GI+ + ++ CK +PEE L+ R P
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PN 372
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
S F+++ C G + + + GLL D C +++++ YC+ + DKA
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSFVIVVSRLC 405
+ K + T +L+ + G + +A +F MK +L VV+ ++ + +
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT- 491
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+L K + DEM G PD ATY +I
Sbjct: 492 --HQLNKVFELIDEMRSAGISPDVATYNILI 520
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+E +V A+++ + + + GI + + + + H E + ++ RG A
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAA 272
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
LS F+ C G + + ELL + G+ D + ++ C + +A ++ K+
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKEL 410
+ S D + ++DG K G+ EEA++ I + + SSF +S +C ++
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSF---LSNICSTGDM 389
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A E+ ++G PD Y +I G+
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 5/196 (2%)
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
H++S RG + + F+ C + ++ LL + G P + + F+ C
Sbjct: 261 HMLS-RGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G KE +L + G+ DS SS+++ +C + ++AI L I + ++ Y
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVY 376
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
L + G M A IF + EL ++ + ++ C+L KA + +LK
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 423 MGHKPDEATYKQVISG 438
G+ P T +I
Sbjct: 437 SGNPPSLTTSTILIGA 452
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 172/394 (43%), Gaps = 17/394 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
NA++ +L R+ ++ A MVR G P+ +T++ + CR+ + +V L D
Sbjct: 15 NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74
Query: 108 -GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G V+ Y +I+ + + G A + EM P Y++++ G + + E
Sbjct: 75 RGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCKAGRGE 129
Query: 166 VSDRIVGLMVEKKLLP--KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
++ M E P + + + D+ + K AE + + ++ + TC
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWER----KAKEAEEMLQEMFEKGLAPCVVTC 185
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
++ A KEGR+ +A+++ L+ RG Y A V C E + + LL +
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P A+ + + QC G + LL + GL+ D + ++L+ C + + D+
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A +L +E + T++ L++GL K G+++ A + + M + ++ +
Sbjct: 306 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
LC +K ++ + EML+ KP Y VI
Sbjct: 366 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 399
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 150/333 (45%), Gaps = 22/333 (6%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN VI ++ D +A L+ M P T++S++ G R + +V+
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRS-GWRPDAYTFNSLIVGYCRTNQVDVA------- 65
Query: 175 VEKKLLPKHFLSG--NDYV-----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ L K L G D V I+ + G+ A +F + + ++
Sbjct: 66 --RDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMY----AALV 119
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
K L K GR +E + + + E G Y A V+ C E + +E +L+++ E+G
Sbjct: 120 KGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLA 179
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
PC + + + + C +G+ + +L + +G + + ++L++ +C+ ++ KA+AL
Sbjct: 180 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMAL 239
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCH 406
K+ + D TY++L+ G DG +E A R+ M+ +++ ++ +++ LC
Sbjct: 240 LNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A D + G KP+ T+ +I+G
Sbjct: 300 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 181/481 (37%), Gaps = 92/481 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V++ Y +G D L V +M++ G P V NAL+ + ++ A L M
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
GV+P+ T++L+ + C G E LL D I YN +I+ K G
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD L R + P T++S+++G + K +++ + + MV P +
Sbjct: 306 ACSLFDSLET----RGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYS 361
Query: 188 NDYVIQKLSDM-----GKTYAAEMIFKRACDEKIE---------------LQDDTCGCM- 226
+ I+ L M G ++ EM+ K + L T G M
Sbjct: 362 S--FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 419
Query: 227 --------------LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++A EGR+ EA + +S+ G+TV Y ++ Q +
Sbjct: 420 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 479
Query: 273 EVCGLLRDVVERGYIP------------CAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+L+ + +P M L V G WK +E
Sbjct: 480 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE---------- 529
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D F +M+ K E L S TY +L+G +DGR EEA
Sbjct: 530 -LTDVFGLFDVMK----------------KNEFLPNS---GTYSSILEGFSEDGRTEEAT 569
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ MKE + ++ + +V+ C K A M++ G P +Y+ ++SG
Sbjct: 570 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGL 629
Query: 440 M 440
+
Sbjct: 630 I 630
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 177/435 (40%), Gaps = 30/435 (6%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+GL + R M+ G+ P+ A A++D + + + A + M G++P T + V
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189
Query: 90 QILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM--CNGR 142
C+ G+ L +L+ G +V YN ++ + +G A LN+M C
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG-- 247
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P TY+ ++ G E + R++ LM L+ + + +I L G+T
Sbjct: 248 -VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY--NALINALCKDGRTD 304
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +F I+ T ++ L K G+V A + + G T Y +F+
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
LCK +E + +++++ P + + + + + V ++ G
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 424
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D ++ M YC ++++A + +++ K ++D Y+ L+DG G+ + AV I
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 484
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLK-----------------ELRKAMKNHDEMLKMG 424
M + V + ++ I++ L ++ EL D M K
Sbjct: 485 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNE 544
Query: 425 HKPDEATYKQVISGF 439
P+ TY ++ GF
Sbjct: 545 FLPNSGTYSSILEGF 559
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 141/391 (36%), Gaps = 97/391 (24%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P N+L++ L + ++ +A MV G +P+ +T+S + LC+ +
Sbjct: 317 GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 376
Query: 102 LGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEM----CN------------ 140
L + + S+V Y +VI K+ ++G EM CN
Sbjct: 377 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 436
Query: 141 ----GR--------------NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
GR +T Y++++DG +T+ + I+ M +P
Sbjct: 437 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 496
Query: 183 HFLSGNDYVIQ--------------KLSDMGKTYAAEM-----IFKRACDEKIELQDDTC 223
F Y I L+ G A E+ +F + T
Sbjct: 497 QF----TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 552
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
+L+ S++GR +EA + L+ E I++ + Y A V CK + + L+ +++
Sbjct: 553 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 612
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G+IP M + LLS ++ +G Q DK
Sbjct: 613 HGFIPHLMSY----------------QHLLSGLICEG-------------------QTDK 637
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
A + + S D + V++DGL K G
Sbjct: 638 AKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 668
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 173/420 (41%), Gaps = 21/420 (5%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L + M +G P + + L+++ N + A + +++ G P+ T++ + +
Sbjct: 81 LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRG 140
Query: 92 LCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
+ GK L L D I V Y +I+ K G+ AA L M +N P
Sbjct: 141 IYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ-KNCQP 199
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y++I+D + + + + MV K + P F + +I L ++ +
Sbjct: 200 NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNS--LIHALCNLCEWKHVAT 257
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ D KI + ++ AL KEG+V EA + + +RG+ Y A ++ C
Sbjct: 258 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC 317
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ +E + +V +G +P + + + C + + L + + L+ D+
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 377
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S+L+ C ++ AIAL ++ ++ TY +LLD L K+ + EA M
Sbjct: 378 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA------M 431
Query: 387 KELKVVSSSSF-------VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LK + S+ I + +C EL A + G +PD TY +I+G
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 179/433 (41%), Gaps = 9/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L ++++ + H V + G P + L+ +Y + +I A L+ M
Sbjct: 98 TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKM 157
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
+ +G P+ T+ + LC+ G + LL S + + YN +ID K
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF+ +EM + ++P TY+S++ + + ++ MV+ K++P +
Sbjct: 218 TEAFNLFSEMVT-KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD--VVSF 274
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ V+ L GK A + + +E T ++ + EA++++ +
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G Y +N CK + ++ L ++ + IP + S + C + ++
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 394
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L ++ + + L++Y C NR + +A+AL IE D+ ++ +D
Sbjct: 395 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G+ + G +E A +F + + ++ I+++ LC L +A K EM + G
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514
Query: 428 DEATYKQVISGFM 440
+ Y + GF+
Sbjct: 515 NGCIYNTITRGFL 527
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 168/390 (43%), Gaps = 20/390 (5%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
RM+R+ P+ N LL ++ + L M G+ PN +T ++ C
Sbjct: 51 RMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHL 109
Query: 96 GK----FEVVLGLL------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ F V+ +L D+ +++++ + ++ G G A ++M G
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVE-----GKIGEALHLFDKMI-GEGFR 163
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY ++++G + T + R++G MV+K P F + +I L + A
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF--AYNTIIDSLCKDRQVTEAF 221
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F + I T ++ AL K + + + + I + V+ L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CKE + E ++ +++RG P + + + C + E ++ ++ KG + +
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ YC ++IDKA+ L ++ + + D TY L+ GL R+++A+ +F
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKAM 414
M + + ++ I++ LC + L +AM
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAM 431
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 146/373 (39%), Gaps = 33/373 (8%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + ++D + ++ M G P + N+L+ AL E + + L M
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V + P+ +++ V LC+ GK A D
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVT------------------------------EAHD 292
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+++M R + P TY++++DG + + + ++ MV K +P + +S N +I
Sbjct: 293 VVDKMIQ-RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP-NVISYNT-LIN 349
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ + A +F C +++ T ++ L R+++AI ++H +
Sbjct: 350 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 409
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ LCK E LL+ + P + + C G+ + +L
Sbjct: 410 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
S + KGL D + S ++ C +D+A L ++++ +L+ Y+ + G ++
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 529
Query: 374 GRMEEAVRIFDYM 386
A+++ M
Sbjct: 530 NETSRAIQLLQEM 542
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 126/309 (40%), Gaps = 39/309 (12%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
+P V + N ++DAL ++ ++ A + M++ GV PN T++ + C + + +
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 103 GLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ D+ + M YN +I+ Y K A EMC + L P TYS+++ G
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR-QELIPDTVTYSTLIHG 385
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPK--------HFLSGNDYVIQKLSDM----------- 198
E+ + + + MV +P +L N Y+ + ++ +
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445
Query: 199 --------------GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
G+ AA +F + ++ T M+ L + G + EA +++
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ E G T+ Y + ++ LL+++V RG+ A ++ FV G
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565
Query: 305 KWKEVEELL 313
+ ++++L
Sbjct: 566 LDQSLKQIL 574
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 22/266 (8%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ ++V+ M G +P V + N L++ + I A L+G M R + P+ T+S +
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383
Query: 90 QILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC + + + L S I + V Y +++D+ K A L + G NL
Sbjct: 384 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI-EGSNL 442
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P + +DG R + E + + + K L P + +I L G A
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS--IMINGLCRRGLLDEA 500
Query: 205 EMIFKRACDEKIELQDDTC---GCMLKALSK----EGRVKEAIQIYHLISERGITVRDSD 257
+F+ E+ ++ C GC+ +++ AIQ+ + RG + S
Sbjct: 501 SKLFR-------EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVE 283
FV +L + + + +LR+ V+
Sbjct: 554 MTLFVKMLSDDGLDQSLKQILREFVQ 579
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 187/438 (42%), Gaps = 17/438 (3%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+A+ ++ ++ G + ++ MR +G V N +L A A ++
Sbjct: 115 EAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDG 174
Query: 73 MV-RDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKG 126
MV R G+ P+ ++ + CR G+ E V LL + +++ + +KG
Sbjct: 175 MVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKG 234
Query: 127 ---DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
D F R+ EM P Y++ +DG + + + ++ MV K L P
Sbjct: 235 RFRDVSELFRRMLEM----GTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ + +I L +G T A +F K + T M+ KEG++ A +
Sbjct: 291 YT--HTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 348
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ E+G+ + Y ++ CKE L+ + G+ P + + C
Sbjct: 349 LGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCK 408
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
KGK +E ++L ++GL LD + ++ +C I A+ L ++ + D+ T
Sbjct: 409 KGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHT 468
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEML 421
Y L+ + +MEE+ ++FD +++V + ++ +++ C + + A++ + M+
Sbjct: 469 YTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMV 528
Query: 422 KMGHKPDEATYKQVISGF 439
+ G + D TY +ISG
Sbjct: 529 QNGCQADSITYGALISGL 546
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 173/429 (40%), Gaps = 39/429 (9%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ + KG F D E++R M G P V A +D L ++ ++ A + MV
Sbjct: 224 TVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVA 283
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
G+ PN +T + + LC+ G F + L L+ S Y + Y ++I Y K+G
Sbjct: 284 KGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLA 343
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L M + L P +TY++++ G + + ++ M + P + +
Sbjct: 344 RAEMLLGRMVE-QGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTY--N 400
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L GK A + + A ++ ++L T M+ K+G + A+ +++ ++E
Sbjct: 401 ALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAEN 460
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + C++ Q EE L + +P + +A C GK
Sbjct: 461 GCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSA 520
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ ++ G DS +L+ C ++++A AL Y+ +LD
Sbjct: 521 LRVFERMVQNGCQADSITYGALISGLCKESRLEEARAL---------------YEGMLDK 565
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHD------EMLKM 423
+ F+Y + K V + S L L K KNH ++ +
Sbjct: 566 RLVPCEVTPVTLAFEYCRREKAVVAVSI---------LDRLDKRRKNHTVNVLVRKLSAI 616
Query: 424 GHKPDEATY 432
GH D + +
Sbjct: 617 GHVEDASLF 625
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++ + ++ + +G F E+ MR GF P + NAL+D L ++ +I+
Sbjct: 355 QGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQE 414
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + G+ +K T++++ C+ G L L
Sbjct: 415 AYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDL--------------------- 453
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
F+R+ E NG + P TY++++ + + E S ++ + +L+P
Sbjct: 454 ------FNRMAE--NGCH--PDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTK-- 501
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I +GK+ +A +F+R + T G ++ L KE R++EA +Y
Sbjct: 502 QTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALY 559
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 166/384 (43%), Gaps = 44/384 (11%)
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYN 116
++ LA + G M++ G P++ T + CR + + L+D + V YN
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYN 194
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID K A D E+ + + P TY+++++G + + R++ M++
Sbjct: 195 AIIDSLCKTRRVNDALDFFKEI-GRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK 253
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+K+ P TY+A +L A K G+V
Sbjct: 254 RKITPNVI----------------TYSA---------------------LLDAFVKNGKV 276
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA +I+ + I Y + +N LC + +E + +V +G P + +
Sbjct: 277 LEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTL 336
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C + ++ +L + +GL+ ++ ++L++ + +DKA +++
Sbjct: 337 INGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMK 415
S D+ TY++LL GL +G +E+A+ IF+ M++ ++ + ++ V+ +C ++ A
Sbjct: 397 SPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWG 456
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+ G KPD TY ++SG
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 153/370 (41%), Gaps = 33/370 (8%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++V++C+ L V M G+ P +L++ R+N + A L M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V G P+ ++ + LC++ + N +DF+ + G G
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRV-----------------NDALDFFKEIGRKG---- 220
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+ P TY+++++G + + R++ M+++K+ P ++
Sbjct: 221 ----------IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS--ALLD 268
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
GK A+ IF+ I+ T ++ L R+ EA Q++ L+ +G
Sbjct: 269 AFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N CK + E+ L R + +RG + + + + G + +E
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
S + G+ D + + L+ C N ++KA+ + ++K + LD+ TY ++ G+ K
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448
Query: 374 GRMEEAVRIF 383
G++E+A +F
Sbjct: 449 GKVEDAWGLF 458
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 40/338 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + + M G+ P + A NA++D+L + + A + + R G+ PN T++ +
Sbjct: 173 DAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC SG++ LL I + N++ +D + K G A + EM ++
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR-MSI 291
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSG------------ 187
P TYSS+++G +++ + ++++ LMV K P ++G
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMK 351
Query: 188 -----------NDYV-----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
N+ V IQ +G A+ F + + T +L L
Sbjct: 352 LFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLC 411
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
G +++A+ I+ + + + + Y + +CK + E+ GL + +G P +
Sbjct: 412 DNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIV 471
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLL-DSFCC 328
+ ++ C KG EVE L + + +GL+ DS C
Sbjct: 472 TYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLC 509
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 160/388 (41%), Gaps = 11/388 (2%)
Query: 59 RQNEIRL--ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS 112
R +I+L A L+ MV+ P+ ++ + + + K++VV+ L GI +
Sbjct: 60 RLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119
Query: 113 V-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
+ +N+VI+ + A L +M P T S+++G R + + +V
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLK-LGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
MVE P + + +I L + A FK + I T ++ L
Sbjct: 179 DKMVEIGYRPD--IVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLC 236
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
GR +A ++ + +R IT Y A ++ K + E + ++V P +
Sbjct: 237 NSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV 296
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
S + C + E ++ ++ KG D ++L+ +C ++++ + L K+
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM 356
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKEL 410
+ + TY+ L+ G F+ G +++A F M V ++ I++ LC L
Sbjct: 357 SQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLL 416
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISG 438
KA+ ++M K D TY VI G
Sbjct: 417 EKALVIFEDMQKSEMDLDIVTYTTVIQG 444
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L +L G D SL+ +C ++ A++L K+ ++ D+ Y+ ++D L
Sbjct: 142 VLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLC 201
Query: 372 KDGRMEEAVRIFDYMKEL--KVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K R+ +A+ D+ KE+ K + + ++ +V+ LC+ A + +M+K P
Sbjct: 202 KTRRVNDAL---DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258
Query: 428 DEATYKQVISGFM 440
+ TY ++ F+
Sbjct: 259 NVITYSALLDAFV 271
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 28/439 (6%)
Query: 21 CYSH--KGLFMDGLEVYRMMRVY-------GFVPAVSACNALLDALYRQNEIRLASCLYG 71
CY+ G F G E ++MRV+ G P ++ N +LD L + + ++
Sbjct: 230 CYNALLGGCFKAG-EFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWE 288
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMYNLVIDFYSKKG 126
MV + + P+ T+ ++ LCRSG + V ++ +G + + MYN ++ + + G
Sbjct: 289 RMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAG 348
Query: 127 DFGAAFDRLNE--MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL--LPK 182
A+ + RNL + D E E+ D ++EK + +P
Sbjct: 349 RVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD-----LLEKDVACIPD 403
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
G +I L G A IF+ A +L + M+ L GR+ +A+++
Sbjct: 404 TVTFGT--LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
Y + + G Y A ++ C+ ++ + + + + G P + + + C
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
K++E + +++ G D SL+ S+++ID A+++ +I +DV
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEM 420
+++L+ GL G+++EA+ +F MKE K + ++ ++ L + KA +
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Query: 421 LKMGHKPDEATYKQVISGF 439
+ G +PD +Y I G
Sbjct: 642 TEDGLEPDIISYNTRIKGL 660
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 202/471 (42%), Gaps = 70/471 (14%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMM-RVYGFVPAVSACNALLDALYRQNEIR-- 64
R S+S AL +VL +S + L+ +R + + G P + + NALLDA R
Sbjct: 80 RFSESAAL-VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDA 138
Query: 65 ---LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----------GIYS 111
AS +GA R ++PN T+++V + LC G + + L DS YS
Sbjct: 139 DAFFASLSHGAFGRR-IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYS 197
Query: 112 SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKT-EVS 167
++M L +K+ A D L+EM R + P Y+++L G A +EK V
Sbjct: 198 TLMCGL-----AKQDRLDHALDLLDEMPRSR-VQPDVVCYNALLGGCFKAGEFEKVMRVW 251
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
D++V K + L+ + ++ L G+ +++R ++ T G ++
Sbjct: 252 DKLV-----KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV---------CGL- 277
L + G V A ++Y I + G+ + + Y + V C+ + +E GL
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366
Query: 278 --------LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
++ + + G + A+EL W +E+ D + D+
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIEL------------WDLLEK------DVACIPDTVTFG 408
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KE 388
+L+ C N +KA + + LDV +Y +++GL GR+ +AV++++ M K+
Sbjct: 409 TLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+S + ++S C + A++ + +M G P TY +I G
Sbjct: 469 GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGL 519
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/428 (18%), Positives = 186/428 (43%), Gaps = 10/428 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++LD G F + EV+ M P V L+ L R ++ A+ +Y +++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV----MYNLVIDFYSKKGDFGAA 131
G+ + ++ + + C++G+ + DS ++ + YN++I G A
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEA 387
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-LSGNDY 190
+ + + P T+ +++ G + +++ + E ++ K +
Sbjct: 388 IELWDLLEKDVACIPDTVTFGTLIHG---LCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L ++G+ A ++++ + + ++ + R +A++IY +++ G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ LCK + +E + R++VE G+ P + K +
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI-EKLKGSLDVATYDVLLDG 369
+ +L KGL +D + L+ CS ++D+A+ + + EK ++ TY+ L+DG
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L++ G +++A ++ + E + S+ + LC + + ++ DE+L G P
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPT 684
Query: 429 EATYKQVI 436
T+ ++
Sbjct: 685 VITWNILV 692
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 168/406 (41%), Gaps = 12/406 (2%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL 102
P + N +L +L + ++ A L+ ++ R V+P++ T+S + L + + + L
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHAL 213
Query: 103 GLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
LLD S V YN ++ K G+F +++ P +TY+ +LDG
Sbjct: 214 DLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
++ + + + MV L P G +I L G A ++ +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYG--ILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ ++K + GRV+EA + + G+ + Y + L +E L
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRT-YNIMIKGLFDSGMVDEAIEL 390
Query: 278 LRDVVERGY--IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
D++E+ IP + + C G + + G LD F SS++
Sbjct: 391 W-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C+ ++ A+ ++ K++K + Y+ L+ G + R +AVRI+ M + +
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ ++ LC ++ ++A EM++ G PD TY +I G
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 165/405 (40%), Gaps = 46/405 (11%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V N+++ AL + + A+ + MV++G PN+ T + + C SGK
Sbjct: 233 GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDA 292
Query: 102 LGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+G+ G+ V YN ++ + K G A + M R P +TY ++L
Sbjct: 293 IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK-RGHKPNSATYGTLLH 351
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G ++ +MV + P H++ + +I + GK A ++F + + +
Sbjct: 352 GYATEGSLVKMHHLLDMMVRNGIQPDHYIF--NILIGTYTKHGKVDDAMLLFSKMRRQGL 409
Query: 217 ELQDDTCGCMLKALSKEGRVKEAI-QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T G ++ AL G+V +A+ Q LISE
Sbjct: 410 NPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE--------------------------- 442
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
G P A+ + C + KW + EEL ++ +G+ ++ ++L+ +
Sbjct: 443 ---------GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHL 493
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
C + +A + + ++ DV TY+ L+DG G+++EA ++ + M V +
Sbjct: 494 CKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNE 553
Query: 396 -SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ C + A +M G P TY ++ G
Sbjct: 554 VTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGL 598
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 174/426 (40%), Gaps = 19/426 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y G D + V++ M G P V N L+ L + A ++ +MV+ G
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRG 338
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAF 132
PN T+ + G + LLD + + + ++N++I Y+K G A
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
++M + L P TY ++D K + + G ++ + L P + N +I
Sbjct: 399 LLFSKM-RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN--LI 455
Query: 193 QKLS-----DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
L D + A EMI + C I +L L KEG V A I+ L+
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFN-----TLLNHLCKEGMVARAKNIFDLMV 510
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ Y ++ C + +E LL +V G P + + + C G+ +
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ L + KG+ S++++ R+ A L++ + K D+ TY+++L
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630
Query: 368 DGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GL ++ ++A+RIF + + + + +F I++ L +A +L G
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 690
Query: 427 PDEATY 432
P+ TY
Sbjct: 691 PNVVTY 696
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 9/292 (3%)
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
D AR +S +MV + +P + ++ VI S +G A R
Sbjct: 63 DAARHSPAVAISLFRRMVMVARPKVPPNLIT-YSVVIDCCSRVGHLDLAFAALGRVIRSG 121
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQI-YHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T +LKAL + R EA+ I + G T Y + LC E++ ++
Sbjct: 122 WTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQA 181
Query: 275 CGLLR-----DVVERGYIPCAMELSRFVASQCGKGKWKEVE-ELLSAVLDKGLLLDSFCC 328
LL D GY P + + + +G+ + L +LD+GL D
Sbjct: 182 LHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTY 241
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+S++ R +DKA + +++ K + T++ LL G G+ +A+ +F M
Sbjct: 242 NSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCR 301
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++ ++ LC +A K D M+K GHKP+ ATY ++ G+
Sbjct: 302 DGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGY 353
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 186/478 (38%), Gaps = 86/478 (17%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC----RSGKFEV 100
P + + ++D R + LA G ++R G + T+S + + LC S ++
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148
Query: 101 VL--------------------GLLDS--------------------GIYSS--VMYNLV 118
L GL D G Y V YN V
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208
Query: 119 IDFYSKKG-DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
I+ ++G A+ ++M + + L+P TY+SI+ + + + ++ MV+
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLD-QGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
+P ++ ++ GK A +FKR C + +E T ++ L K GR
Sbjct: 268 GAMPNRIT--HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325
Query: 238 EAIQIYHLISERG-----------------------------ITVRD---SDYYAF---V 262
EA +I+ + +RG + VR+ D+Y F +
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
K + ++ L + +G P + + + C GK + ++ +GL
Sbjct: 386 GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLT 445
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D+ +L+ C+ + DKA L +++ + ++ LL+ L K+G + A I
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNI 505
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
FD M + V ++ ++ C ++ +A K + M+ G KP+E TY +I+G+
Sbjct: 506 FDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 8/296 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P N LL+ L ++ + A ++ MVR V + T++ + C GK +
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEA 537
Query: 102 LGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL+ + + V YN +I+ Y K G AF +M + + + PG TYS+IL
Sbjct: 538 AKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMAS-KGVNPGIVTYSTILQ 596
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + +T + + M++ + K + + ++ L T A IF+
Sbjct: 597 GLFQARRTAAAKELYLWMIKSGI--KFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDF 654
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
L++ T M+ AL K GR EA ++ + RG+ Y+ + L ++ EE+
Sbjct: 655 HLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDD 714
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
L + + G + L+ V KG+ ++ LS + + L++ SL+
Sbjct: 715 LFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/377 (17%), Positives = 153/377 (40%), Gaps = 10/377 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGD 127
+ R V PN T+S+V R G ++ L I S ++ ++ ++ K
Sbjct: 82 VARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKR 141
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV----EKKLLPKH 183
A D TP +Y+ +L G +++ + ++ M+ + P
Sbjct: 142 TSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPD 201
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+S N + L + + A +F + D+ + T ++ ALSK + +A +
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + G + + ++ C +P + G+ + + G P + + C
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN 321
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ E ++ +++ +G +S +L+ Y + + K L + + D +
Sbjct: 322 GRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIF 381
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
++L+ K G++++A+ +F M+ + + ++ IV+ LC + ++ AM ++
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441
Query: 423 MGHKPDEATYKQVISGF 439
G PD ++ +I G
Sbjct: 442 EGLTPDAVVFRNLIHGL 458
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/400 (17%), Positives = 176/400 (44%), Gaps = 18/400 (4%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++ Y+ G D + ++ MR G P ++DAL ++ A +G ++
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+G++P+ + + LC K+ E+ + ++ GI +++ +N +++ K+G
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500
Query: 130 AA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A FD + + R++ TY++++DG + K + + +++ MV + P
Sbjct: 501 RAKNIFDLMVRVDVQRDVI----TYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTY 556
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I G+ A +F++ + + T +L+ L + R A ++Y +
Sbjct: 557 --NTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM 614
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ GI Y + LC+ + ++ + +++ + + + + G+
Sbjct: 615 IKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRH 674
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E ++L +++L +GL+ + +M+ +++ L + +EK + + + L
Sbjct: 675 DEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNAL 734
Query: 367 LDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVS 402
+ L + G + +A + E L+ ++ S V++VS
Sbjct: 735 VGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVLLVS 774
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 196/470 (41%), Gaps = 51/470 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE--- 62
EG + ++ Y G + ++ + M G P N L+ + E
Sbjct: 106 EGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGK 165
Query: 63 --IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSG-IYSSVMY 115
+ LA YG M+ GV NK S ++ LC GKFE V+ ++ G I + Y
Sbjct: 166 DVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTY 225
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDG---------ARRYEKTE 165
+ VI + AF EM RN + P Y++++D AR +
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEM--KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
D +V L +L +K+S + Y EM+ + C I T
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKS-----RKVSKANEVY--EMMLSKGCTPNIV----TYTA 332
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSD-----------------YYAFVNVLCKE 268
++ L K G++++A QIY ++ + + + D D Y A V+ LCK
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+Q +E LL+ + G P + + C GK E +E+ + +L+ G + +
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
SSL++ ++++D A+ + K+ + + +V Y ++DGL K G+ +EA ++ M+E
Sbjct: 453 SSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512
Query: 389 LKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ ++ ++ + K ++ +M G P+ TY+ +I+
Sbjct: 513 KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 156/374 (41%), Gaps = 52/374 (13%)
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG--IYSSVMYNLVIDFYSKKGDFGAAFDR 134
G ++FT A LC+SGK+ L LL+ + +V+Y +I + F A D
Sbjct: 5 GYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDF 64
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L M + P TY +L G EK RI+ +M+ + P + N V
Sbjct: 65 LTRM-RASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIF-NSLVHAY 122
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
YA +++ K CGC + G V
Sbjct: 123 CRSGDYAYAYKLLKKMV----------QCGC----------------------QPGYVV- 149
Query: 255 DSDYYAFVNVLCKEHQP-EEVCGLLR----DVVERGYIPCAMELSRFVASQCGKGKWKEV 309
Y + +C +P ++V L +++E G + + +S F CG GK+++
Sbjct: 150 ---YNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++ ++ KG + D+ S ++ Y C+ +++KA L ++++ + DV Y L+D
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHL----KELRKAMKNHDEMLKMGH 425
K G +E+A FD E++ + V+ + L H +++ KA + ++ ML G
Sbjct: 267 FCKAGFIEQARNWFD---EMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGC 323
Query: 426 KPDEATYKQVISGF 439
P+ TY +I G
Sbjct: 324 TPNIVTYTALIDGL 337
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 175/440 (39%), Gaps = 57/440 (12%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C G F V R M GF+P S + ++ L +++ A L+ M R+G++P
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ + ++ + C++G E D G +V+ Y +I Y K A + +
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKA-NEV 314
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM----VEKKLLPKHFL------ 185
EM + TP TY++++DG + K E + +I +M VE + HF
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGAS 374
Query: 186 -SGNDYVIQKLSD-MGKTYA---AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
N + L D + K Y A + K E E ++ K G++ EA
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ + E G Y + ++ L K+ + + +L ++E P + + +
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C GK E +L+ + +KG C+ +V
Sbjct: 495 CKVGKTDEAYKLMVMMEEKG-------CNP----------------------------NV 519
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
TY ++DG K GR+E+ + + M + ++ ++++ C L +A K +E
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579
Query: 420 MLKMGHKPDEATYKQVISGF 439
M + A Y++VI GF
Sbjct: 580 MKQTYWPRHVAGYRKVIEGF 599
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 175/437 (40%), Gaps = 73/437 (16%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM---------------VRDG 77
EVY MM G P + AL+D L + +I AS +Y M V DG
Sbjct: 313 EVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDG 372
Query: 78 VS--PNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGA 130
S PN FT+ + LC++ + + LL S + V+Y+ +ID K G
Sbjct: 373 ASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDE 432
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + M P TYSS++D + ++ +++ +++ M+E P +
Sbjct: 433 AQEVFTTMLEC-GYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE-- 489
Query: 191 VIQKLSDMGKTYAAE----MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I L +GKT A M+ ++ C+ + T M+ K GRV++ +++ +
Sbjct: 490 MIDGLCKVGKTDEAYKLMVMMEEKGCNPNVV----TYTAMIDGFGKSGRVEKCLELLQQM 545
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
S +G Y +N C +E LL ++ ++ Y P R VA G
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM-KQTYWP------RHVA-----GYR 593
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
K +E NR+ ++ L +I + Y VL
Sbjct: 594 KVIEGF-------------------------NREFIASLYLSFEISENDSVPVAPVYRVL 628
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSSSS---FVIVVSRLCHLKELRKAMKNHDEMLKM 423
+D K GR+E A+ + + + S+++ + ++ L + KA + + +M+
Sbjct: 629 IDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISR 688
Query: 424 GHKPDEATYKQVISGFM 440
G P+ + +I G +
Sbjct: 689 GSIPELSILVHLIKGLL 705
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 21/325 (6%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
++ CE DAL +D G + EV+ M G+ P V ++L+D L++
Sbjct: 407 VEGCEPNHVVYDAL---IDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YN 116
+ LA + M+ + +PN ++ + LC+ GK +++++ + + G +V+ Y
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
+ID + K G + L +M + + P F TY +++ T + D L+ E
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQM-SSKGCAPNFVTYRVLINHCC---STGLLDEAHKLLEE 579
Query: 177 KK--LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ-DDTCGCMLKALSKE 233
K P+H ++G VI+ + + + A + E + ++ K
Sbjct: 580 MKQTYWPRH-VAGYRKVIEGFN---REFIASLYLSFEISENDSVPVAPVYRVLIDNFIKA 635
Query: 234 GRVKEAIQIYHLISERGI--TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
GR++ A+++ +S + + + L H+ ++ L D++ RG IP
Sbjct: 636 GRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELS 695
Query: 292 ELSRFVASQCGKGKWKEVEELLSAV 316
L + +W+E +LL ++
Sbjct: 696 ILVHLIKGLLRVNRWEEALQLLDSI 720
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 178/428 (41%), Gaps = 16/428 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
++ G + + + M+ G VP+ N +LD + +A ++ M + GVSP+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAA---FD 133
++ L+ C G+ + +++ G I + L+ID + +KG F
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
++ EM L P ++++++G + + + ++ MV + P + + +I
Sbjct: 284 KMVEM----GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY--THTTLID 337
Query: 194 KLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L G T A +F K + + T M+ KE ++ A + + E+G+
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y ++ CK L+ + + G+ P + + C KG E L
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L+ V GL D + LM +C ++++ K+ K+ + D+ +Y L+ +
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCR 517
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+M+E+ R+F+ L ++ + ++ ++ C A+K M G PD T
Sbjct: 518 QKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSIT 577
Query: 432 YKQVISGF 439
Y +ISG
Sbjct: 578 YGALISGL 585
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 154/352 (43%), Gaps = 11/352 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK---- 97
GF+ + C ++DA ++ + + MV G++PN ++ + LC+ G
Sbjct: 254 GFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQA 313
Query: 98 FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
FE++ ++ G +V + +ID KKG AF ++ P TY+++++
Sbjct: 314 FELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMIN 373
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDE 214
G + +K ++ ++ M E+ L+P + N Y +I +G A + E
Sbjct: 374 GYCKEDKLNRAEMLLSRMQEQGLVP----NTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
T ++ L K+G + EA ++ + +S G+ Y ++V C++
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+++ G+ P + +++ C + + KE E L + GL+ +S++
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICG 549
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
YC A+ L ++ + D TY L+ GL K+ ++++A ++D M
Sbjct: 550 YCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 165/409 (40%), Gaps = 47/409 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L++D + KG + + M G P V AL++ L +Q I+ A L MVR
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
G PN +T + + LC+ G F + L L+ S Y + Y +I+ Y K+
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L+ M + L P +TY++++DG + + ++ LM ++ P + +
Sbjct: 383 RAEMLLSRM-QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY--N 439
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L G A + + ++ T ++ ++ ++ ++ + +
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV 499
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP--------------------- 288
G T Y ++ C++ Q +E L + V G IP
Sbjct: 500 GFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559
Query: 289 -----------CA---MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
CA + ++ C + K + L A++DKGL +L
Sbjct: 560 VKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYE 619
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
YC ++ D + A+++ +++L+ + T + L+ L +G+++ A F
Sbjct: 620 YC--KKDDSSTAINV-LDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFF 665
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 113/229 (49%), Gaps = 2/229 (0%)
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ +E ++ CM+ ++ G++KEA+ + + +G+ ++V E
Sbjct: 147 NKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVE 206
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ ++ +RG P + V + C G+ E E L+A++++G ++D+ C+ ++
Sbjct: 207 IAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLII 266
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+ +C +++ + K+ ++ + +V + L++GL K G +++A + + M +
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGF 439
+ + ++ LC KA + ++++ G+KP+ TY +I+G+
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 184/441 (41%), Gaps = 46/441 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ C S + + + M G VP V A N+L+D LY+ + A
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS---GIYSS--VMYNLVIDF 121
L+ + + P T++ + L R GK + V+ LL+ IY + YN V+D
Sbjct: 541 WQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDC 600
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
SK G+ A D L M + P S+Y++++ G + E+ E + R+ M KK+L
Sbjct: 601 LSKNGEVNCAIDMLYSMTE-KGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM--KKIL- 656
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
DY T +L + K G +KEA+
Sbjct: 657 -----APDYA------------------------------TLCTILPSFVKNGLMKEALH 681
Query: 242 -IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ I + G V S +++ + + K+ E+ ++ RG + L +
Sbjct: 682 TVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHL 741
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C K E +L + G+ L + +SL+ ID A L ++++L D
Sbjct: 742 CKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE 801
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDE 419
TY+++LD + K R+EE +++ M S+ ++ ++S L K L +A+ +
Sbjct: 802 FTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN 861
Query: 420 MLKMGHKPDEATYKQVISGFM 440
++ G P TY ++ G +
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLL 882
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/438 (18%), Positives = 187/438 (42%), Gaps = 24/438 (5%)
Query: 17 LVLDCYSHKGLF---------MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
+ L+ Y++ GL + +EVY+ M G P+V + L+ A ++ ++
Sbjct: 167 MSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVL 226
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFY 122
L M GV PN +++++ ++L ++ +F+ +L DSG V+ + ++I
Sbjct: 227 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVL 286
Query: 123 SKKG---DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
G D A F ++ + P TY ++LD ++ + MV
Sbjct: 287 CDAGRLSDAKAVFWKM----KASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGY 342
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ V+ L +G+ A +F ++ + + + ++ K A
Sbjct: 343 --NDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+++++ ++ G + + F+N K Q + + +G +P + + S
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G G+ + + + G+ D+ + +++ + D+A+ + + D
Sbjct: 461 LAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPD 520
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD 418
V + L+D L+K G+ EA ++F +KE+K+ ++ ++ ++S L ++++ M+ +
Sbjct: 521 VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580
Query: 419 EMLKMGHKPDEATYKQVI 436
EM + + P+ TY V+
Sbjct: 581 EMTRTIYPPNLITYNTVL 598
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 181/441 (41%), Gaps = 29/441 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ G D V+ M+ P LLD + + ++ AMV
Sbjct: 280 TVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVA 339
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGA 130
DG + N +++ V LC+ G+ + L + D G+ YN +I + K F
Sbjct: 340 DGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDR 399
Query: 131 AFDRLNEMCNGRNLTPGFSTY----------SSILDGARRYEKTEVSDRIVGLMVEKKLL 180
A + N M N +P T+ L +RYE M K ++
Sbjct: 400 ALELFNHM-NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEH----------MKSKGIV 448
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P ++ + V+ L+ G+ A+ +F + T M+K SK + EA+
Sbjct: 449 PD--VAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAM 506
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + E G + ++ L K + E L + E P + ++
Sbjct: 507 NFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGL 566
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
+GK KEV +LL + + +++++ N +++ AI + + + + D+
Sbjct: 567 GREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDL 626
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE- 419
++Y+ ++ GL K+ R+EEA R+F MK++ ++ ++ +++A+ E
Sbjct: 627 SSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEY 686
Query: 420 MLKMGHKPDEATYKQVISGFM 440
+LK G D++++ ++ G +
Sbjct: 687 ILKAGCNVDKSSFHSLMEGIL 707
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 191/449 (42%), Gaps = 25/449 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + + V+D G + L V+ M+ G P + N+L+ + +
Sbjct: 340 DGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDR 399
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVID 120
A L+ M G SPN +T L +SG+ + + GI V N V+
Sbjct: 400 ALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLY 459
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ G G A E+ ++P TY+ ++ + K + + MVE +
Sbjct: 460 SLAGSGRLGMAKRVFYEL-KAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCV 518
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P L+ N +I L GK A +F + + KIE + T +L L +EG+VKE +
Sbjct: 519 PD-VLALNS-LIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 576
Query: 241 QIYHLISERGITVRDSDYYAFVNVL-CKEHQPEEVCG--LLRDVVERGYIPCAMELSRFV 297
Q L+ E T+ + + VL C E C +L + E+G CA +LS +
Sbjct: 577 Q---LLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKG---CAPDLSSYN 630
Query: 298 ASQCGKGKWKEVEELLSAV--LDKGLLLDSFCCSSLMEYYCSNRQIDKAI-ALHIKIEKL 354
G K + +EE + K L D +++ + N + +A+ + I K
Sbjct: 631 TVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKA 690
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
++D +++ L++G+ K +E+++ + + ++ + F+ + R HL + +KA+
Sbjct: 691 GCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIR--HLCKHKKAL 748
Query: 415 KNH---DEMLKMGHKPDEATYKQVISGFM 440
+ H ++ +G +Y +I G +
Sbjct: 749 EAHQLFNKFKGLGVSLKTGSYNSLIRGLV 777
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L K R+++AI +Y+ + G + Y ++ L K + + L ++
Sbjct: 838 TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEM 897
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+E G P + + G + V +L ++++G+ D + L++ C+ ++
Sbjct: 898 LEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRL 957
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIV 400
+ + ++ +L D+ Y++L+DGL K R+EEAV +F+ MK+ ++ + ++ +
Sbjct: 958 NDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSL 1017
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L + +A + ++E+L+ G KP TY +I G+
Sbjct: 1018 ILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGY 1056
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L K G EA+++Y + E GI+ Y + K+ + V LL ++ RG P
Sbjct: 181 LVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN 240
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + ++ E +L + D G D + +++ C ++ A A+
Sbjct: 241 VYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFW 300
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
K++ D TY LLD G + V +++ M + S+ VV LC +
Sbjct: 301 KMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVG 360
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +A+ DEM + G P++ +Y +ISGF+
Sbjct: 361 RVDEALAVFDEMKEKGMSPEQYSYNSLISGFL 392
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 129/304 (42%), Gaps = 10/304 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL---LDS 107
N+L+ L +N I +A L+ M R G P++FT++L+ + +S + E +L + +
Sbjct: 770 NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHR 829
Query: 108 GIYSS--VMYNLVIDFYSKKGDFGAAFD-RLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
Y S V YN +I K A D N M G + TP TY +LDG + K
Sbjct: 830 KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP--CTYGPLLDGLLKSGKM 887
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
++ + M+E P + + ++ G T +F++ ++ I +
Sbjct: 888 VDAENLFNEMLEYGCEPNCTIY--NILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYT 945
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ L GR+ + + + + E G+ Y ++ L K + EE L ++ ++
Sbjct: 946 ILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKK 1005
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G IP + + GK E ++ +L KG F ++L+ Y + D A
Sbjct: 1006 GIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNA 1065
Query: 345 IALH 348
A +
Sbjct: 1066 YAAY 1069
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + ++++D G DGL +R + G P + N L+D L + I
Sbjct: 935 QGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEE 994
Query: 66 ASCLYGAMVRDGVSPNKFTW-SLVAQI---LCRSGKFEVVLGLLDSGIYSSVM-YNLVID 120
A L+ M + G+ PN +T+ SL+ + + ++ LL G SV YN +I
Sbjct: 995 AVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIR 1054
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
YS G A+ +M G P STY
Sbjct: 1055 GYSVSGSTDNAYAAYGQMIVG-GCQPNSSTY 1084
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 194/449 (43%), Gaps = 19/449 (4%)
Query: 3 QSCEGRDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
Q EG++ Q +S ++ Y G + MM +G +P + N L+ L
Sbjct: 270 QDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIA 329
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQ----ILCRSGKFEVVLGLLDSGIYSS-VMY 115
+ A L M G+ P+ T++++A+ + +G + ++ +L G + V Y
Sbjct: 330 GSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTY 389
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS---TYSSILDGAR-RYEKTEVSDRIV 171
++I + + G+ A EM ++ GF S++L G+ + + +V+ ++
Sbjct: 390 TVLICGHCQIGNVEEALKLYKEM-----ISHGFQLSIISSTVLLGSLCKSRQVDVAFKLF 444
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
M L P L +I L G+ A +++++ C +I G +L L
Sbjct: 445 CEMEANGLRPD--LITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC 502
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
++G++ +A + + +++ Y ++ K E L + + E+G P +
Sbjct: 503 EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIV 562
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + C K + LL + GL ++ ++LM YC + + L ++
Sbjct: 563 TFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEM 622
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
+ TY V++ GL K +++E+ ++ + M + + S+ ++ C +++
Sbjct: 623 KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDM 682
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
RKA + +D+ML +P TY +I+GF
Sbjct: 683 RKAFQLYDKMLLHNLEPTSVTYNILINGF 711
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 150/355 (42%), Gaps = 16/355 (4%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P + + L+ L +Q E++ A LY M + + PN + LC GK
Sbjct: 447 MEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGK 506
Query: 98 FEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
D I S+ ++YN++ID Y K+G+ A +L + + ++P T++
Sbjct: 507 ISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV-KLYKQLGEKGISPTIVTFN 565
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM----GKTYAAEMIF 208
S++ G K + R++ + KL H L N L ++ G + +
Sbjct: 566 SLMYGFCINRKLSQARRLLDTI---KL---HGLEPNAVTYTTLMNVYCEEGNMQSLLELL 619
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ I T ++K L K+ +++E+ Q+ + G+T Y + CK
Sbjct: 620 SEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKA 679
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ L ++ P ++ + + C G K+ + LL ++ ++ + L+ +
Sbjct: 680 RDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAY 739
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF 383
+++++ +C+ +DKA+ ++ + + + Y ++ L K + EA F
Sbjct: 740 TTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 180/450 (40%), Gaps = 48/450 (10%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+VY ++V G + + ++D L RQ+ + A + P+ +++ +
Sbjct: 232 DVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRY 291
Query: 93 CRSGKFEVVLG----LLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ G +V +L G+ + YN++I G G A D N+M N L P
Sbjct: 292 CKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMEN-HGLEPD 350
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY+ + G R + I+ M+ K P L +I +G A +
Sbjct: 351 MVTYNILAKGFRLLGLINGAWNIIQKMLIKG--PNPNLVTYTVLICGHCQIGNVEEALKL 408
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+K +L + +L +L K +V A +++ + G+ Y ++ LCK
Sbjct: 409 YKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCK 468
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK---------------------- 305
+ + ++ L + IP ++ + C KGK
Sbjct: 469 QGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIIL 528
Query: 306 -------------WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIK 350
+E +L + +KG+ +SLM +C NR++ +A L IK
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ L+ + TY L++ ++G M+ + + MK + + ++ +V+ LC +
Sbjct: 589 LHGLEP--NAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L+++ + ++M +G PD+ +Y +I F
Sbjct: 647 LQESCQLLEDMDAVGLTPDQVSYNTIIQAF 676
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 107/257 (41%), Gaps = 8/257 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y +G + +++Y+ + G P + N+L+ ++ A L +
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGA 130
G+ PN T++ + + C G + +L LL + + Y +VI K+
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
+ L +M + LTP +Y++I+ + + ++ M+ L P +
Sbjct: 650 SCQLLEDM-DAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTY--NI 706
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I G A+ + + K+ L ++KA +G V +A+ + + E+G
Sbjct: 707 LINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG 766
Query: 251 ITVRDSDYYAFVNVLCK 267
V DY A + LCK
Sbjct: 767 FEVSIRDYSAVIGRLCK 783
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 161/371 (43%), Gaps = 16/371 (4%)
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAF 132
V PN +T++ + LC G+ L +LD + V YN++++ K + A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---- 188
+ ++ M TP TY+ ++DG + +V D + L + LP H +
Sbjct: 63 ELIDLM-RAEGCTPNNVTYNVLMDGM--CGEGDVDDALELL----RNLPSHGCKPSTVNY 115
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ V++ L + A+ + E + T ++ +L ++G +++AIQ+ +S+
Sbjct: 116 NTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 175
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G T Y A +N LC++ + GLL + G P + + + C +W +
Sbjct: 176 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVD 235
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
EEL+ + G L D+ ++L+ + C + AI + ++ + + TY ++
Sbjct: 236 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 295
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
GL K ++++A+ +F+ M + ++ L + +A++ ++ G P
Sbjct: 296 GLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 355
Query: 429 EATYKQVISGF 439
Y ++ G
Sbjct: 356 TVLYNAILLGL 366
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 160/376 (42%), Gaps = 26/376 (6%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + ++++D +G D LE+ R + +G P+ N +L L
Sbjct: 71 EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 130
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVID 120
A L M+R+ PN+ T+++V LCR G + + LL+ G ++ V YN +I+
Sbjct: 131 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 190
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVE 176
++ + A L++M P TY+++L G AR + E+ D M +
Sbjct: 191 GLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN----MTQ 245
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
LP + + +I L G A +FK+ D+ T ++ L+K ++
Sbjct: 246 NGCLPDNVTF--NTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+A+++++ + +G D Y L + EE +R + + G P + +
Sbjct: 304 DQALELFNEMGHKGFN-PDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C GK + ++++ ++ G + D L+E +++A L IK+
Sbjct: 363 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL----- 417
Query: 357 SLDVATYDVLLDGLFK 372
+ DVL++ L K
Sbjct: 418 ----CSRDVLVNSLIK 429
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 158/389 (40%), Gaps = 47/389 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN-EIRLASCLYGA 72
A S ++ Y GL + + V+ M+ YG P + NA++DA + E + + +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGD 127
M R+GV P++ T++ + + R G +E L D + YN ++D K G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
AF+ L +M R + P +YS+++DG + K D + L E + L
Sbjct: 390 MDLAFEILAQMPVKR-IMPNVVSYSTVIDG---FAKAGRFDEALNLFGEMRYL------- 438
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
I L + +L +K GR +EA+ I ++
Sbjct: 439 ---------------------------GIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
GI Y A + K+ + +EV + ++ +P + S + G +K
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E E+ GL D S+L++ C N + A++L ++ K S +V TY+ ++
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
D + M+ R DY + SSS
Sbjct: 592 DAFGRSATMD---RSADYSNGGSLPFSSS 617
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 36/254 (14%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T +L S+ G + A ++ ++ R I Y ++ +CK Q + +L +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ +P + S + G++ E L + G+ LD ++L+ Y +
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS----SSF 397
++A+ + ++ + DV TY+ LL G K G+ +E ++F MK V+ + S+
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 398 V--------------------------------IVVSRLCHLKELRKAMKNHDEMLKMGH 425
+ ++ LC + A+ DEM K G
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 426 KPDEATYKQVISGF 439
P+ TY +I F
Sbjct: 581 SPNVVTYNSIIDAF 594
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 186/435 (42%), Gaps = 37/435 (8%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIR-LASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M +G VP N+L+ + S +Y M+ GVSP+ F +++ C+ G
Sbjct: 84 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143
Query: 97 KFEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+ + LL + + S +V YN VI + G A+ L+EM + P +Y+++
Sbjct: 144 RLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK-MGILPDTVSYNTL 202
Query: 155 LDG----ARRYEKTEVSDRI--VGLMVEKKLLPKHF-------------LSGND------ 189
+DG + D I + L+ LL ++ +SG D
Sbjct: 203 IDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTF 262
Query: 190 -YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I +L GK ++ + + + T ++ +L K + A+ +Y +
Sbjct: 263 SSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVV 322
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI V Y ++ L K E + ++E +P + + V C G
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E +++ +L+K ++ + SS++ Y +++A++L K+E + TY ++D
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GLFK G+ E A+ + M+ + V ++ + V + R+ +KE++ +K +M+ G
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK---DMVSKG 499
Query: 425 HKPDEATYKQVISGF 439
D+ Y +I F
Sbjct: 500 VTLDQINYTSLIDVF 514
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 185/410 (45%), Gaps = 16/410 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E YR M + GF P V +++++ L + ++ L M V PN T++ + L
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 93 CRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
++ + L L + V+Y +++D K GD A ++ +M N P
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA-EKTFKMLLEDNQVPN 363
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY++++DG + ++ I+ M+EK ++P + +I G A +
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS--MINGYVKKGMLEEAVSL 421
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY--AFVNVL 265
++ D+ + T G ++ L K G+ + AI++ + R I V +++Y A VN L
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM--RLIGVEENNYILDALVNHL 479
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + +EV GL++D+V +G + + + G + + ++G+ D
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ L+ ++ A K + KG D+AT++++++ K G E ++++D
Sbjct: 540 VSYNVLISGMLKFGKVGADWAY--KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 597
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
MK + S S IVV LC ++ +A+ ++M+ M P+ TY+
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 647
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 188/434 (43%), Gaps = 18/434 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D ++ L +Y M V G + L+D L++ ++R A + ++
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 76 DGVSPNKFTWSLVAQILCRSG-----KFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGA 130
D PN T++ + LC++G +F + L S I + V Y+ +I+ Y KKG
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M +N+ P TY +++DG + K E++ + L E +L+ + N+Y
Sbjct: 418 AVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMA---IELSKEMRLIG---VEENNY 470
Query: 191 V----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ + L +G+ + + K + + L ++ K G + A+ +
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
ERG+ Y ++ + K + + + E+G P + + SQ +G
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ + +L + G+ C+ ++ C N ++++AI + ++ ++ ++ TY +
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
LD K R + + + + + +S + +++ LC L +KA +M G
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 426 KPDEATYKQVISGF 439
PD T+ ++ G+
Sbjct: 710 IPDTVTFNSLMHGY 723
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 187/435 (42%), Gaps = 20/435 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ Y KG+ + + + R M VP ++D L++ + +A L M
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
GV N + + L R G+ + V GL+ + V Y +ID + K GD A
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM R + +Y+ ++ G ++ K +D M EK + P ++ +
Sbjct: 523 ALAWAEEM-QERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPD--IATFNI 578
Query: 191 VIQKLSDMGKTYAAEMIFK-----RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ G + E I K ++C K L +C ++ L + G+++EAI I +
Sbjct: 579 MMNSQRKQGDS---EGILKLWDKMKSCGIKPSLM--SCNIVVGMLCENGKMEEAIHILNQ 633
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ I + Y F++ K + + + ++ G + +A+ C G
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
K+ ++ + +G + D+ +SLM Y + KA++ + + + S +VATY+
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++ GL G ++E + MK + ++ ++S + ++ +M + EM+ G
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 425 HKPDEATYKQVISGF 439
P +TY +IS F
Sbjct: 814 LVPKTSTYNVLISEF 828
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 106/289 (36%), Gaps = 81/289 (28%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M GF+P N+L+ + + +R A Y M+ G+SPN T++
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN----------- 752
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++ GL D+G+ V D+ R + P TY++++ G
Sbjct: 753 -TIIRGLSDAGLIKEV-------------------DKWLSEMKSRGMRPDDFTYNALISG 792
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + S I M+ L+PK S + +I + +++GK A + K
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPK--TSTYNVLISEFANVGKMLQARELLKE------- 843
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE-HQPE---- 272
+ +RG++ S Y ++ LCK P+
Sbjct: 844 ----------------------------MGKRGVSPNTSTYCTMISGLCKLCTHPDVEWN 875
Query: 273 -------EVCGLLRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELL 313
E GLL+++VE +GYIPC + A+ G + E L
Sbjct: 876 KKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 141/346 (40%), Gaps = 21/346 (6%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G V + N L+ + + ++ A Y M G+ P+ T++++ + G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 98 FEVVLGLLDS----GIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E +L L D GI S+M N+V+ + G A LN+M + P +TY
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML-MEIHPNLTTYR 647
Query: 153 SILDGARRYE------KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
LD + +++ KT + G+ + +++ + +I L +G T A M
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY--------NTLIATLCKLGMTKKAAM 699
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ T ++ V++A+ Y ++ E GI+ + Y + L
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+EV L ++ RG P + ++ Q G K + ++ GL+ +
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ L+ + + ++ +A L ++ K S + +TY ++ GL K
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 111/275 (40%), Gaps = 8/275 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L+++ M+ G P++ +CN ++ L ++ A + M+ + PN T+ +
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 92 LCRSGKFEVVL----GLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
+ + + + LL GI S +YN +I K G A + +M R P
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM-EARGFIP 711
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
T++S++ G + +M+E + P ++ + +I+ LSD G +
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN--VATYNTIIRGLSDAGLIKEVDK 769
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ D T ++ +K G +K ++ IY + G+ + S Y ++
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + LL+++ +RG P ++ C
Sbjct: 830 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 186/435 (42%), Gaps = 37/435 (8%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIR-LASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M +G VP N+L+ + S +Y M+ GVSP+ F +++ C+ G
Sbjct: 86 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 145
Query: 97 KFEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
+ + LL + + S +V YN VI + G A+ L+EM + P +Y+++
Sbjct: 146 RLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK-MGILPDTVSYNTL 204
Query: 155 LDG----ARRYEKTEVSDRI--VGLMVEKKLLPKHF-------------LSGND------ 189
+DG + D I + L+ LL ++ +SG D
Sbjct: 205 IDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTF 264
Query: 190 -YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I +L GK ++ + + + T ++ +L K + A+ +Y +
Sbjct: 265 SSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVV 324
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RGI V Y ++ L K E + ++E +P + + V C G
Sbjct: 325 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 384
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E +++ +L+K ++ + SS++ Y +++A++L K+E + TY ++D
Sbjct: 385 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 444
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS----SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
GLFK G+ E A+ + M+ + V ++ + V + R+ +KE++ +K +M+ G
Sbjct: 445 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK---DMVSKG 501
Query: 425 HKPDEATYKQVISGF 439
D+ Y +I F
Sbjct: 502 VTLDQINYTSLIDVF 516
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 185/410 (45%), Gaps = 16/410 (3%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E YR M + GF P V +++++ L + ++ L M V PN T++ + L
Sbjct: 247 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 306
Query: 93 CRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
++ + L L + V+Y +++D K GD A ++ +M N P
Sbjct: 307 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA-EKTFKMLLEDNQVPN 365
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
TY++++DG + ++ I+ M+EK ++P + +I G A +
Sbjct: 366 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS--MINGYVKKGMLEEAVSL 423
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY--AFVNVL 265
++ D+ + T G ++ L K G+ + AI++ + R I V +++Y A VN L
Sbjct: 424 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM--RLIGVEENNYILDALVNHL 481
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + +EV GL++D+V +G + + + G + + ++G+ D
Sbjct: 482 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 541
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ L+ ++ A K + KG D+AT++++++ K G E ++++D
Sbjct: 542 VSYNVLISGMLKFGKVGADWAY--KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 599
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
MK + S S IVV LC ++ +A+ ++M+ M P+ TY+
Sbjct: 600 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 649
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 188/434 (43%), Gaps = 18/434 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++D ++ L +Y M V G + L+D L++ ++R A + ++
Sbjct: 300 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 359
Query: 76 DGVSPNKFTWSLVAQILCRSG-----KFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGA 130
D PN T++ + LC++G +F + L S I + V Y+ +I+ Y KKG
Sbjct: 360 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 419
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L +M +N+ P TY +++DG + K E++ + L E +L+ + N+Y
Sbjct: 420 AVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMA---IELSKEMRLIG---VEENNY 472
Query: 191 V----IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ + L +G+ + + K + + L ++ K G + A+ +
Sbjct: 473 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 532
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
ERG+ Y ++ + K + + + E+G P + + SQ +G
Sbjct: 533 QERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDS 591
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ + +L + G+ C+ ++ C N ++++AI + ++ ++ ++ TY +
Sbjct: 592 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 651
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
LD K R + + + + + +S + +++ LC L +KA +M G
Sbjct: 652 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 711
Query: 426 KPDEATYKQVISGF 439
PD T+ ++ G+
Sbjct: 712 IPDTVTFNSLMHGY 725
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 187/435 (42%), Gaps = 20/435 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ Y KG+ + + + R M VP ++D L++ + +A L M
Sbjct: 405 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 464
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGA 130
GV N + + L R G+ + V GL+ + V Y +ID + K GD A
Sbjct: 465 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 524
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM R + +Y+ ++ G ++ K +D M EK + P ++ +
Sbjct: 525 ALAWAEEM-QERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPD--IATFNI 580
Query: 191 VIQKLSDMGKTYAAEMIFK-----RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
++ G + E I K ++C K L +C ++ L + G+++EAI I +
Sbjct: 581 MMNSQRKQGDS---EGILKLWDKMKSCGIKPSLM--SCNIVVGMLCENGKMEEAIHILNQ 635
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ I + Y F++ K + + + ++ G + +A+ C G
Sbjct: 636 MMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 695
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
K+ ++ + +G + D+ +SLM Y + KA++ + + + S +VATY+
Sbjct: 696 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 755
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++ GL G ++E + MK + ++ ++S + ++ +M + EM+ G
Sbjct: 756 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 815
Query: 425 HKPDEATYKQVISGF 439
P +TY +IS F
Sbjct: 816 LVPKTSTYNVLISEF 830
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 106/289 (36%), Gaps = 81/289 (28%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M GF+P N+L+ + + +R A Y M+ G+SPN T++
Sbjct: 706 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN----------- 754
Query: 98 FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++ GL D+G+ V D+ R + P TY++++ G
Sbjct: 755 -TIIRGLSDAGLIKEV-------------------DKWLSEMKSRGMRPDDFTYNALISG 794
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
+ + S I M+ L+PK S + +I + +++GK A + K
Sbjct: 795 QAKIGNMKGSMTIYCEMIADGLVPK--TSTYNVLISEFANVGKMLQARELLKE------- 845
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE-HQPE---- 272
+ +RG++ S Y ++ LCK P+
Sbjct: 846 ----------------------------MGKRGVSPNTSTYCTMISGLCKLCTHPDVEWN 877
Query: 273 -------EVCGLLRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELL 313
E GLL+++VE +GYIPC + A+ G + E L
Sbjct: 878 KKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 926
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 141/346 (40%), Gaps = 21/346 (6%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G V + N L+ + + ++ A Y M G+ P+ T++++ + G
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 590
Query: 98 FEVVLGLLDS----GIYSSVMY-NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
E +L L D GI S+M N+V+ + G A LN+M + P +TY
Sbjct: 591 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML-MEIHPNLTTYR 649
Query: 153 SILDGARRYE------KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
LD + +++ KT + G+ + +++ + +I L +G T A M
Sbjct: 650 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY--------NTLIATLCKLGMTKKAAM 701
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ T ++ V++A+ Y ++ E GI+ + Y + L
Sbjct: 702 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 761
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+EV L ++ RG P + ++ Q G K + ++ GL+ +
Sbjct: 762 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 821
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ L+ + + ++ +A L ++ K S + +TY ++ GL K
Sbjct: 822 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 111/275 (40%), Gaps = 8/275 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L+++ M+ G P++ +CN ++ L ++ A + M+ + PN T+ +
Sbjct: 595 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654
Query: 92 LCRSGKFEVVL----GLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
+ + + + LL GI S +YN +I K G A + +M R P
Sbjct: 655 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM-EARGFIP 713
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
T++S++ G + +M+E + P ++ + +I+ LSD G +
Sbjct: 714 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN--VATYNTIIRGLSDAGLIKEVDK 771
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ D T ++ +K G +K ++ IY + G+ + S Y ++
Sbjct: 772 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 831
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + LL+++ +RG P ++ C
Sbjct: 832 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 866
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 161/374 (43%), Gaps = 10/374 (2%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGD 127
M+ G +P+ F ++ V Q RS E V +++SG +V Y+++I +K G
Sbjct: 36 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 95
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
+ L+EM R TP YSS++ + + + + + M+ P +
Sbjct: 96 LDESLKILSEMVM-RGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFY 154
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L GK A FK+ + +L L G++++A ++ +
Sbjct: 155 E--LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMK 212
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ Y ++ +CK + EE C L + GY+P + S + C G+ +
Sbjct: 213 SHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELE 272
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ E+ ++L+ G + + ++L+ C ++ +A L K+ + D Y+ L+
Sbjct: 273 KALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 332
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
G K G M+EA +++ M + + +F ++ C L +L +A + EM G
Sbjct: 333 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 392
Query: 426 KPDEATYKQVISGF 439
D TY+ +I+G
Sbjct: 393 AADSCTYRILIAGL 406
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+N+ TYSSI+ + K E S +++ M+ P F + V+Q +
Sbjct: 4 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVF--AFNGVMQGFARSNNM 61
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A +++ + + + + ++ L+K G++ E+++I + RG T Y +
Sbjct: 62 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
V L K + + L +++ G+ P + + C GK K+ E + G
Sbjct: 122 VRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGC 181
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ + L+ CS+ Q+++A L +++ S DV TY+ LLD + K R+EE +
Sbjct: 182 QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCK 241
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY-------- 432
+F+ M+ V + +F ++ LC EL KA++ ML+ G KP++ TY
Sbjct: 242 LFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC 301
Query: 433 ---------------------------KQVISGF 439
+I+G+
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 335
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 7/260 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+G +++ MR G+VP V + L+ L R E+ A ++G+M+ G PNK+T++ +
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297
Query: 90 QILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR+ K L + + +V YN +I Y K+G A EM G L
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P T+++++DG + K ++ +V M K L +I LS K A
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADS--CTYRILIAGLSRATKLDEA 415
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
++K+ ++K L +C + L K G + +A ++ + G +
Sbjct: 416 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 475
Query: 265 LCKEHQPEEVCGLLRDVVER 284
L K + E+ L+ R
Sbjct: 476 LIKLGRVEDAQKLMEPAKAR 495
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 169/397 (42%), Gaps = 10/397 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L++ M + G P++ A ++L+ AL + + AS L+ M+R G P++ +
Sbjct: 94 GKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMF 153
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ LC++GK E + G +V +YN+++ G A EM
Sbjct: 154 YELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM-K 212
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ +P TY+++LD + + E ++ M +P +I L G+
Sbjct: 213 SHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFST--LIHGLCRTGE 270
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +F + + T ++ L + +V +A +++ +++ I Y +
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330
Query: 261 FVNVLCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ CK +E L R++ G P + + + C GK EL++ + K
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
GL DS L+ ++D+A+ ++ ++ + K LD + + GL K G +++A
Sbjct: 391 GLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 450
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
+F+ ++ V + +F I+ L L + A K
Sbjct: 451 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQK 487
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 176/381 (46%), Gaps = 13/381 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N +L++ R++++ S LY MV GVSP +T +L+ LC SG+FE +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 105 LDS-GIY----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
D G+ + + +++ Y + G A + L+ M + P Y++++
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGM-GSFGVQPNKVIYNTLISSFC 232
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK-RACDEKIEL 218
R + E ++R+V M E L P + + I L GK A IF+ DE++ L
Sbjct: 233 REGRNEEAERLVERMREDGLFPD--VVTFNSRISALCSAGKILEASRIFRDMQIDEELGL 290
Query: 219 QDD---TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
T ML+ KEG ++EA + + G + Y ++ L + + E
Sbjct: 291 PRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQ 350
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L+++V++G P + + C G + ++ ++ G+ D+ S+L+
Sbjct: 351 LALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGC 410
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSS 394
CS ++ KA + ++ + S + T ++LL L+K+GR+ EA ++ M E + +
Sbjct: 411 CSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN 470
Query: 395 SSFVIVVSRLCHLKELRKAMK 415
+ IV+ LC +L +A++
Sbjct: 471 VTCNIVIDGLCKSGKLDEAVE 491
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 180/435 (41%), Gaps = 36/435 (8%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD---GVS-PNKFTWSLVAQILC 93
MR G P V N+ + AL +I AS ++ M D G+ PN T++L+ + C
Sbjct: 247 MREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFC 306
Query: 94 RSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ G E L++S + YN+ + + G A L EM + + + P
Sbjct: 307 KEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVD-KGIEPNI 365
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIF 208
++++++DG + + I+GLM+ + P ++ GK A I
Sbjct: 366 YSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYST--LLHGCCSTGKVLKANNIL 423
Query: 209 KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
TC +L +L KEGR+ EA ++ ++ER + + ++ LCK
Sbjct: 424 HEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKS 483
Query: 269 HQPEEVCGLLRDVVERGY-----------------------IPCAMELSRFVASQCGKGK 305
+ +E ++ + G +P + S + C G+
Sbjct: 484 GKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGR 543
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E + ++ K L DS + + +C + +I A + +EK + + TY+
Sbjct: 544 LDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L+ GL ++ E + D MKE + + ++ ++S LC ++ A DEML+ G
Sbjct: 604 LILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663
Query: 425 HKPDEATYKQVISGF 439
P+ ++++ +I F
Sbjct: 664 ISPNISSFRLLIKAF 678
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 185/446 (41%), Gaps = 61/446 (13%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
MI S G D+ + + L C + K L + + ++ MMR G P CN LL +L+++
Sbjct: 391 MISSGIGPDTVTYSTLLHGCCSTGKVLKANNI-LHEMMR-RGCSPNTYTCNILLHSLWKE 448
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVID 120
I A L M + T ++V LC+SGK LD + ++ + I
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGK-------LDEAV--EIVEGMWIH 499
Query: 121 FYSKKGDFGAAFDRL-NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ G+ G +F L + NG+ P TYS I++G + + + + + MV K L
Sbjct: 500 GSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSL 559
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P D +I DT + + K G++ A
Sbjct: 560 HP-------DSIIY---------------------------DT---FIHSFCKHGKISSA 582
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + +RG Y + + L ++Q E+ GLL D+ E+G P + ++
Sbjct: 583 FRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISC 642
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ K+ LL +L KG+ + L++ +C KA + E + +L
Sbjct: 643 LCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFC------KASDFGVVKEVFEIALS 696
Query: 360 V-----ATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKA 413
+ A Y ++ + L G + EA +FD + + + + ++ +LC + L A
Sbjct: 697 ICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENA 756
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+M+ G++ D A++ VI G
Sbjct: 757 SDILHKMIDKGYRFDPASFMPVIDGL 782
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 151/347 (43%), Gaps = 37/347 (10%)
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----LPKHF 184
A F+R++ R P TYS ++D R + +++ G ++ + + +
Sbjct: 85 ALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSL 144
Query: 185 LSG----------NDYVIQKLSDMG---KTYAAEMIFKRACDE-----KIEL------QD 220
L G D + ++ ++G + + K CD+ +++ Q
Sbjct: 145 LRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG 204
Query: 221 DTCGC-------MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
C C ++ L KEG+V EA ++H ++++G+ Y + ++ LCK ++
Sbjct: 205 GGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDK 264
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
G+LR +V G P + + + G+WK+ + + +G++ ++ CS+ +
Sbjct: 265 AQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVA 324
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
+ C + +I++A + L++ +Y LL G G + + +F+ M +V
Sbjct: 325 FLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP 384
Query: 394 SSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ F I+V+ +R+AM ++M K G PD TY VI F
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 186/474 (39%), Gaps = 82/474 (17%)
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS------------------------ 79
+P V + L+D R + LA +G ++R G+
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 80 ------------PNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-------VMYNLVID 120
P+ ++S V + +C G+ + L +L + V+Y+ V+
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K+G G A D +EM + + P TY+S++ + + + I+ MV +
Sbjct: 220 GLFKEGKVGEACDLFHEMTQ-QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + + +I S +G+ A +FK + TC + L K GR++EA
Sbjct: 279 PDNVTY--NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336
Query: 241 Q-----------------------------------IYHLISERGITVRDSDYYAFVNVL 265
+ +++L+ GI + VN
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
K E + D+ +RG P + + + C G + + + ++DKG+ +
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD- 384
L++ +C++ + KA L +I + ++ L++ L K+GR+ EA RIFD
Sbjct: 457 AVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDM 516
Query: 385 YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ + + F ++ C + ++ +A + HD M+ +G +PD TY +++G
Sbjct: 517 IIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 181/434 (41%), Gaps = 15/434 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRM-MRVYGFVPA-VSACNALLDALYRQNEIRLASCLYGAM 73
S VL G L++ RM ++ G P V + ++ L+++ ++ A L+ M
Sbjct: 178 STVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEM 237
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDF 128
+ GV PN T++ V LC++ + G+L +G+ +V YN +I YS G +
Sbjct: 238 TQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQW 297
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A EM R + P T S+ + ++ + E + M+ K H L+
Sbjct: 298 KQAVRMFKEM-TSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG----HKLNII 352
Query: 189 DY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
Y ++ + G +F + I ++ +K G V+EA+ I+ +
Sbjct: 353 SYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDM 412
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+RG+ Y A ++ C+ ++ ++++G P + C G
Sbjct: 413 QKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDL 472
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
+ EEL+ + +KGL +SL+ + C ++ +A + I + DV + L
Sbjct: 473 VKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL 532
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+DG G+M EA R+ D M + + ++ +V+ C + + E+L G
Sbjct: 533 IDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV 592
Query: 426 KPDEATYKQVISGF 439
KP TY ++ G
Sbjct: 593 KPTTFTYGIILDGL 606
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/466 (19%), Positives = 183/466 (39%), Gaps = 50/466 (10%)
Query: 7 GRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
G Q D ++ ++ YS G + + +++ M G +P C+ + L + I
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIE 333
Query: 65 LA-----------------------------------SCLYGAMVRDGVSPNKFTWSLVA 89
A S L+ MVRDG+ PN+ ++++
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393
Query: 90 QILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ G + + + G+ V+ Y VI + + G A D+ N M + + +
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID-KGV 452
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP--KHFLSGNDYVIQKLSDMGKTY 202
P F+ Y ++ G + ++ +V + K L P F S +I L G+ +
Sbjct: 453 EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS----LINHLCKEGRVF 508
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A+ IF + + ++ G++ EA +++ + GI Y V
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
N CK + ++ L R+++ +G P + G+ +E+ +++ G+
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIA 628
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ S L+ C N ++AI + K+ + D+ ++++ +FK R EEA +
Sbjct: 629 VTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688
Query: 383 FDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
F + + +V + ++ I++ L + +A MLK G P
Sbjct: 689 FASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSP 734
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 152/379 (40%), Gaps = 11/379 (2%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-------VMYNLVIDF 121
L+ M G P+ ++S V + +C G+ + L +L + V+Y+ V+
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K+G G A D +EM + + P TY+S++ + + + I+ MV + P
Sbjct: 221 LFKEGKVGEACDLFHEMTQ-QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +I S +G+ A +FK + TC + L K GR++EA +
Sbjct: 280 DNVTY--NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + +G + Y ++ ++ L +V G +P + V
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
G +E + + +GL D +++ +C +D A+ + + A
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
Y L+ G G + +A + ++ + SF +++ LC + +A + D +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517
Query: 421 LKMGHKPDEATYKQVISGF 439
++ G K D + +I G+
Sbjct: 518 IRTGEKADVNIFTSLIDGY 536
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 14/221 (6%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
DGL ++R + G P +LD L+ A ++ M+ G++ T+S++
Sbjct: 579 DGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILL 638
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG-------R 142
LCR+ E + + +V +++VI F A R E G
Sbjct: 639 TGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKA---RRREEAEGLFASIPDY 695
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKT 201
L P TY+ +++ + E ++ + +M++ L P HF+ + +++ L + G+
Sbjct: 696 GLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFI---NVIVRTLLEKGEI 752
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
A + R + I + T +L S +G+ +E + +
Sbjct: 753 VKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNL 793
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 170/401 (42%), Gaps = 69/401 (17%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S+++ Y+ G+ +E + M+ +G P V N++L + ++ LA +Y M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
++ +PN+ T+ ++ LC++GK + L + D ++KG
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDE--------------MTQKG------- 231
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+ P Y+ IL G + ++T+ R++ M +SG
Sbjct: 232 ----------IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK---------VSG------ 266
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
C + I TC +L K G++ EA + L + G +
Sbjct: 267 -----------------CCPDSI-----TCNALLDGFCKLGQIDEAFALLQLFEKEGYVL 304
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y + ++ L + + +EV R + + G P + + + C G +L
Sbjct: 305 GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML 364
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + +GL D++C ++L++ +C +DKA +L ++I K TY +L+ G+ ++
Sbjct: 365 NDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRN 424
Query: 374 GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
G ++EA +IF+ M+ L S +F ++ LC EL +A
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 56/371 (15%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN ++ +K F A N+M N P +T+ +L+G + KT+ + ++ M
Sbjct: 169 YNSILHVMVQKEVFLLALAVYNQMLK-LNYNPNRATFVILLNGLCKNGKTDDALKMFDEM 227
Query: 175 VEKKLLPKH-----FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+K + P LSG K +D M C + I TC +L
Sbjct: 228 TQKGIPPNTMIYTIILSG--LCQAKRTDDVHRLLNTMKVSGCCPDSI-----TCNALLDG 280
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
K G++ EA + L + G + Y + ++ L + + +EV R + + G P
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + + C G +L+ + +GL D++C ++L++ +C +DKA +L +
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
+I K TY +L+ G+ ++G ++EA +IF+ M+ L S +F ++ LC
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460
Query: 409 ELRKAM---------KNH---------------------------------DEMLKMGHK 426
EL +A KN D+M+K G
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCT 520
Query: 427 PDEATYKQVIS 437
P A YK +++
Sbjct: 521 PSSAVYKCLMT 531
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 195/485 (40%), Gaps = 97/485 (20%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L K +F+ L VY M + P + LL+ L + + A ++ M + G
Sbjct: 172 ILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKG 231
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAF 132
+ PN ++++ LC++ + + V LL++ S S+ N ++D + K G AF
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAF 291
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDR------IVGLMVEKKLLPKH 183
L ++ G YSS++DG A+RY++ + R I +V +L +
Sbjct: 292 ALL-QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350
Query: 184 F--LSGNDYVIQKLSDMGK------TYAAEMIFKRACDE---------KIELQDDTC--- 223
F + DY + L+DM + TY + K CD ++E+ + C
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPT 410
Query: 224 ----GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL-- 277
++ + + G + EA QI++ + G + + A ++ LCK + EE L
Sbjct: 411 SCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFY 470
Query: 278 ----------------------------------------LRDVVERGYIPCAMELSRFV 297
L +V+ G P + +
Sbjct: 471 KMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 530
Query: 298 ASQCGKGK-------WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
C KGK W + L + D+ L L E + +++KA+ ++
Sbjct: 531 TWSCRKGKLSVAFSLWLKYLRSLPSQEDETL--------KLAEEHFEKGELEKAVRCLLE 582
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKE 409
+ + ++A Y + L GL + R EEA++IF +KE ++ V+ S V++++ LC
Sbjct: 583 MNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGN 642
Query: 410 LRKAM 414
L A+
Sbjct: 643 LEMAV 647
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 138/333 (41%), Gaps = 45/333 (13%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
S V +NLVID +K F + L E+ N P T+S ++ Y K+ ++++
Sbjct: 95 SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPP-PTFSVLIAA---YAKSGMAEKA 150
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
V K+ D G C + T +L +
Sbjct: 151 VE------------------SFGKMKDFG------------CKPDVF----TYNSILHVM 176
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
++ A+ +Y+ + + + + +N LCK + ++ + ++ ++G P
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
M + ++ C + +V LL+ + G DS C++L++ +C QID+A AL
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSSSSFVIVVSRLCH 406
EK L + Y L+DGLF+ R +E ++F E VV + I++ C
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVL---YTILIRGFCE 353
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + A+ ++M + G PD Y +I GF
Sbjct: 354 VGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 29/328 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
LE++R YG P V N+L+D +R + A +Y M R G+ P++FT S++ +
Sbjct: 289 LEMHR----YGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRG 344
Query: 92 LCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
LC G+ +V L+ SGI ++ YN +ID + K G+ A M N + P
Sbjct: 345 LCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRM-NEVGIEP 403
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TYSS++DG + K E++ I MV K + P + +I + G AA
Sbjct: 404 NVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPN--VLTYTAMIHGHAKFGDLDAAFR 461
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ K ++ I T ++ L +E RV++A+ I + + D +N C
Sbjct: 462 LHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVM---FIMKYAGQKKPGD----INSFC 514
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ EE C +L V I ++ G++ E + S + + ++ DSF
Sbjct: 515 SNYTTEEDCSILNSVTYMTLI-----YGLYI-----DGQYHEAGKFFSCMRESDMVPDSF 564
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKL 354
S L+ C + A+ L+ + K+
Sbjct: 565 TYSLLIRGQCMLGYVLNAMMLYADMVKI 592
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 176/437 (40%), Gaps = 30/437 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+LV C H+G EV+ M P V + ++ L + + A L+ M
Sbjct: 165 TLVNAC-RHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKE 223
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
GV PN +T++ + C+ L L + S ++ N VI G F A +R+
Sbjct: 224 TGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLA--NRI 281
Query: 136 NEMCNG------RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+++ N + P Y+S++DGA R + + + M L P F
Sbjct: 282 SDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTC--S 339
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+++ L G+ A + I L ++ K+G + EA+ ++E
Sbjct: 340 IIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEV 399
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
GI Y + ++ K+ + E G+ ++V +G P + + + G
Sbjct: 400 GIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAA 459
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV--------- 360
L + +KG+ ++ S L++ C ++ A+ +K K D+
Sbjct: 460 FRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTT 519
Query: 361 ---------ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
TY L+ GL+ DG+ EA + F M+E +V S ++ +++ C L +
Sbjct: 520 EEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYV 579
Query: 411 RKAMKNHDEMLKMGHKP 427
AM + +M+K+G KP
Sbjct: 580 LNAMMLYADMVKIGVKP 596
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 51/348 (14%)
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
D L+ C L P ++ILDG ARR+++ ++ M+ + ++P L +
Sbjct: 111 DALSVFCRLPTL-PALPACNAILDGLVKARRFDRVW---KLFDEMLSRGMVPS--LVTYN 164
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
++ G A ++ + +I+ T M+ L +EG V EA +++ ++ E
Sbjct: 165 TLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKET 224
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA------------------- 290
G+ Y A ++ CK L +++++ G +P A
Sbjct: 225 GVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDV 284
Query: 291 ----MELSRF-------VASQCGKGKWKE--VEELLSAVLDK---GLLLDSFCCSSLMEY 334
+E+ R+ V + G ++ +E L+ D GL D F CS ++
Sbjct: 285 KNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRG 344
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL----K 390
C Q+ A +++ +L+ A Y+ L+D KDG + EA+ M E+
Sbjct: 345 LCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPN 404
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
VV+ SS + S+ +++ AM + EM+ G +P+ TY +I G
Sbjct: 405 VVTYSSLIDGHSKK---RKMEIAMGIYMEMVAKGVEPNVLTYTAMIHG 449
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 177/411 (43%), Gaps = 22/411 (5%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L +++ S GL D L V+ + +PA+ ACNA+LD L + L+ M+
Sbjct: 96 LGVLVIALSQMGLHDDALSVFCRLPT---LPALPACNAILDGLVKARRFDRVWKLFDEML 152
Query: 75 RDGVSPNKFTWSLVAQILCR-----SGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDF 128
G+ P+ T++ + CR + +EV ++ I +V+ Y+ +I ++G
Sbjct: 153 SRGMVPSLVTYNTLVNA-CRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCV 211
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF---- 184
A +RL M + P TY++++ + + + + +++ L+P
Sbjct: 212 IEA-ERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITT 270
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
L G ++ ++SD+ + + + + + + ++ + G +EA+ +Y
Sbjct: 271 LIGGFFLANRISDVKNAFLE--MHRYGIAPTVPVYNS----LIDGAFRSGYAQEALTVYQ 324
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++ G+ + V LC Q + L + + G A + + C G
Sbjct: 325 DMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDG 384
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
E + + + G+ + SSL++ + R+++ A+ +++++ +V TY
Sbjct: 385 NLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYT 444
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAM 414
++ G K G ++ A R+ M E + S++ V ++V LC ++ A+
Sbjct: 445 AMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAV 495
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
WK +E+LS +G++ ++L+ + KA + ++ + +V TY
Sbjct: 145 WKLFDEMLS----RGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYST 200
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++ L ++G + EA R+F MKE V + ++ ++S C + + + + E+LK G
Sbjct: 201 MICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSG 260
Query: 425 HKPDEATYKQVISGF 439
P+ +I GF
Sbjct: 261 LVPNAVIITTLIGGF 275
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 16/396 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD---- 106
++ L I A L+ + G SPN ++ V L ++G+ E L +
Sbjct: 112 TTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG 171
Query: 107 -SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
S + + Y +VID K A +M + P TY++++DG + K +
Sbjct: 172 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKASKMD 230
Query: 166 VSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ +++ +M+ K P G + + + + K A+M +R C+ + +
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTS- 288
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
+L +GR +EA Q+ ++ RG Y + +++L + E + ++
Sbjct: 289 ---LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
E+G P A+ + + G + E+L + G+ D F +SLM+ Y ++D
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 405
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIV 400
+A ++ ++ + T++VL+ GLFKDG+ + A +F M E + V + S+ I+
Sbjct: 406 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTIL 465
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ L + +A EM+ G P+ TY +I
Sbjct: 466 IDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 180/434 (41%), Gaps = 45/434 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + V+D G DGL+ + M VP + ++D L + + A ++ M
Sbjct: 145 AYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM 204
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDF 128
V+ G P+ T++ + ++ K + LLD + ++V Y ++ + K
Sbjct: 205 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 264
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + +M R PG ++S+L + E + +++ M + P L +
Sbjct: 265 NEAKEVIAQM-RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I L G+ A +F ++ T G +++ SK G V+ A +I L+++
Sbjct: 324 --LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y + ++ K + ++ G+ +V G P A+ +
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN-------------- 427
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK-IEKLKGSLDVATYDVLL 367
VL GL D + D+A +L + +EK + + +Y +L+
Sbjct: 428 -------VLMHGLFKDG--------------KTDRAFSLFKEMLEKEEVPPTLVSYTILI 466
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
DGL K GR+ EA F M + ++ ++ ++ L + +A K ++M+K+G
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526
Query: 427 PDEATYKQVISGFM 440
PD Y +I+G +
Sbjct: 527 PDVQAYSALITGLI 540
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L+ ++ EA + ++ + + G + ++ CK QP+ LL ++R
Sbjct: 13 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR- 71
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ P + + C G AV K L D +++++ +++ID+A
Sbjct: 72 FRPDVFLYTSVIHGYCKAGDLDT--GYFRAVTPKASL-DVISYTTVIKGLADSKRIDEAC 128
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRL 404
L +++ S +V Y ++DGL K GR+E+ ++ F+ M V + +++ +V+ L
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + L A K ++M++ G PD TY +I GF
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 223
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 148/402 (36%), Gaps = 84/402 (20%)
Query: 113 VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
V YN VI + A+ N M + P +++++ G + + +V +++
Sbjct: 8 VSYNTVISGLASIDKMDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKAGQPQVGHKLLN 66
Query: 173 LMVEKKLLPKHFLSGNDYVIQ---KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
+ K+ P FL + VI K D+ Y RA K L + ++K
Sbjct: 67 QAL-KRFRPDVFLYTS--VIHGYCKAGDLDTGYF------RAVTPKASLDVISYTTVIKG 117
Query: 230 LSKEGRVKEAIQIYHLISERGIT------------------VRD---------------- 255
L+ R+ EA +++ + G + + D
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 256 -SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ Y ++ LCK + C + +V++G +P + + + K E +LL
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 315 AVLDKGL---------LLDSFC-------------------C-------SSLMEYYCSNR 339
+L KG ++ FC C +SL+ YY S
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
+ ++A + ++ + DV Y L+D LF GR+ EA +FD M E + ++
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ + + A + + M K G PD Y ++ G++
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV 399
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I + G AE + +R + + T G +++ L + GR+++A ++ +
Sbjct: 155 NTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG 214
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ + ++ CK+ E + L R++ ERG P A+ + V C K
Sbjct: 215 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 274
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ + GL D+ ++L++ YC ++D A+ + + LD TY L+
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR +A R+ M E + ++++ +V+ C +++ ++ EM G KP
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394
Query: 428 DEATYKQVISGF 439
TY +++GF
Sbjct: 395 GVVTYNVIMNGF 406
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 153/332 (46%), Gaps = 21/332 (6%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
V+ M+ G V + N ++ + R ++ A L+ M GV+P+ +T+ + Q LC
Sbjct: 138 VFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLC 197
Query: 94 RSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R G+ E G+ + G+ ++V++ ++ID + KKGD + EM R + P
Sbjct: 198 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDA 256
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAE 205
TY++I++G R + + IV M L P + Y ++ DM
Sbjct: 257 VTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQN 316
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
M+ E + L + T ++ LSK GR +A ++ + E G+ ++ Y ++
Sbjct: 317 MVA-----EGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAF 371
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C++ + LL+++ +G P + + + C G+ K + LL+A+++ G+ D
Sbjct: 372 CRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDD 431
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ L++ +C + ++ IE+LK +
Sbjct: 432 ITYNILLDGHCKHGKV-------TDIEELKSA 456
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
GL E KL + +++ L +G+ +A+ +F + + M+ +
Sbjct: 111 GLPPEAKLF--------NVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 162
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G + A ++ +SE G+T Y A + LC+ + E+ G+ + RG P A+
Sbjct: 163 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 222
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + + C KG + + EL + ++G+ D+ ++++ C R + A + +++
Sbjct: 223 VFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 282
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKEL 410
D TY L+DG K+ ++ A+ I M V + ++ ++S L
Sbjct: 283 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 342
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A + EM++ G +PD TY VI F
Sbjct: 343 ADAERVLGEMMEAGLEPDNTTYTMVIDAF 371
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 160/386 (41%), Gaps = 57/386 (14%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P AC +L AL R + SC G M R +P +
Sbjct: 63 GLLP--DACTLVLLALRRGIRLEPTSC-TGLMSRFPTAPEACAF---------------Y 104
Query: 102 LGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
L LLD+G+ ++N+++ + G+ +A + +EM R + ++++++ G R
Sbjct: 105 LQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEM-QSRGVRRTVVSFNTMISGMCR 163
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ ++ + M E + P + G +IQ L +G+ A +F++ C ++
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYG--ALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 221
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ A K+G + ++++ + ERG+ Y A VN LC+ + G++ +
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 281
Query: 281 VVERGYIP-------------------CAMELSR-FVASQCG---------------KGK 305
+ G P AME+ + VA G G+
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ E +L +++ GL D+ + +++ +C + + L +++ V TY+V
Sbjct: 342 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 401
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV 391
+++G K G+M+ A + + M + V
Sbjct: 402 IMNGFCKLGQMKNADMLLNAMINIGV 427
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++V+D + KG GL + + M+ G P V N +++ + +++ A
Sbjct: 356 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 415
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-------LDSGIYSSVMYNLV 118
L AM+ GVSP+ T++++ C+ GK + L D G+Y+S++ +V
Sbjct: 416 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGEIV 474
>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cucumis sativus]
Length = 683
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 189/441 (42%), Gaps = 14/441 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + +++LD G + L M V G V AC L+D L++ +I+ A
Sbjct: 40 GMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEA 99
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSG--IYSSVMYNLVIDF 121
L+ + + + PN T+S + C+ G E L ++ + + + Y+ +I+
Sbjct: 100 EYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLING 159
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y K+G AF L +M + +N P TY+ +LDG+ + +++ + M + L
Sbjct: 160 YVKQGLLHDAFKVLRKMVH-KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKD 218
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
F+ D + + G+ AE + + ++ ++ K G+V A+
Sbjct: 219 NVFIL--DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALN 276
Query: 242 IYHLISERGITVRDSDYYAFVNVLCK--EHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ ++ + + + +N L K + E + +R E G P + +
Sbjct: 277 LAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMR---EMGLSPDLATYNTMLNG 333
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
KG W EL + + + L+ ++ C+ ++ C +++ AI + ++ +
Sbjct: 334 NFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPT 393
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD 418
TY +LL+ K R + ++ + + +++ V + I++S LC L RKA
Sbjct: 394 STTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLK 453
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M + G D TY +I G+
Sbjct: 454 DMEERGIIADTTTYNALIHGY 474
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 190/430 (44%), Gaps = 10/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ Y +GL D +V R M +P + LLD ++ +A LY M +
Sbjct: 154 SSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQ 213
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
G+ N F + RSG+ E +V + G+ V Y ++D + K G +
Sbjct: 214 GGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSS 273
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + EM +N+ T++ +++ + K++ ++ I M E L P L+ +
Sbjct: 274 ALNLAQEM-TSKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPD--LATYNT 329
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ G +A ++ K+ TC M+ L + GR++ AI I + G
Sbjct: 330 MLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMG 389
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + Y +N+ K + + + +V + +++ C G ++
Sbjct: 390 LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKAT 449
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L + ++G++ D+ ++L+ YC + + +A + + + S D+ TY++LL GL
Sbjct: 450 AVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGL 509
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G + EA + +K+ +V ++ ++ ++ C ++ ++ ++ + EM+ G P
Sbjct: 510 SKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKP 569
Query: 430 ATYKQVISGF 439
Y +I F
Sbjct: 570 RAYNMLIGYF 579
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 165/410 (40%), Gaps = 53/410 (12%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKF-EVVLGLLDSG----IYSSVMYNLVIDFYSKKGD 127
MV G+ P+ T+ + LC+ GK E L L + G ++V Y +++D K G
Sbjct: 1 MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60
Query: 128 FGAAFDRLNEM--------------------------------CN--GRNLTPGFSTYSS 153
A L M CN NL P + TYS+
Sbjct: 61 VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKR 210
++D + ++ + M EK +P N YV Q L +M+ K
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY--AFVNVLCKE 268
A T +L K G A+ +Y + + G+ +D+ + AFVN + +
Sbjct: 181 AMPNIC-----TYAILLDGSFKAGWQDIALDLYSKMKQGGL--KDNVFILDAFVNNMKRS 233
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
+ EE L+ + G P + + + GK L + K ++ D
Sbjct: 234 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 293
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ L+ + D +++ + ++ S D+ATY+ +L+G FK G A+ +++ MK
Sbjct: 294 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 352
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
K++ ++ + I+++ LC + A+ EM+ MG P TY+ +++
Sbjct: 353 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 402
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 124/297 (41%), Gaps = 8/297 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +Y MR G P ++ N +L+ +++ A L+ M + PN T +++
Sbjct: 307 DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMI 366
Query: 90 QILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC +G+ E + +L G+Y +S Y ++++ S K + +E+ L
Sbjct: 367 NGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNI-SSKSRRADTILQTHELLVNMQL 425
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
Y+ ++ + T + ++ M E+ ++ + + +I A
Sbjct: 426 KVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADT--TTYNALIHGYCISSHLKRA 483
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M + E++ +T +L LSK G + EA + I +RG+ Y +
Sbjct: 484 FMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCG 543
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
CK +E + ++V +G+IP + + GK K+ +EL++ + KG+
Sbjct: 544 HCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGV 600
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV + P G+ ++ L GK +++ + + L + + +L AL K
Sbjct: 1 MVGSGIFPDVVTFGS--ILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKA 58
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V EA+ + RG ++ L K Q +E L ++ + +P +
Sbjct: 59 GKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITY 118
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + S+C G E L + +K + + SSL+ Y + A + K+
Sbjct: 119 SALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVH 178
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE--LK--VVSSSSFVIVVSRLCHLKE 409
++ TY +LLDG FK G + A+ ++ MK+ LK V +FV + R ++E
Sbjct: 179 KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEE 238
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + +M G KPD Y ++ GF+
Sbjct: 239 AEELVA---KMASGGLKPDLVNYTNLMDGFL 266
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 178/419 (42%), Gaps = 32/419 (7%)
Query: 38 MRVYGFVPAVSACNALLDALYR---QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
M+ P + N L+ AL R + + L+ ++ +++ GV N T++++ C
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60
Query: 95 SGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
K +GL+ S +V YN ++D KKG A D L +M N L P +
Sbjct: 61 ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGLFPNRN 119
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----- 204
T++ ++ G + + + ++ +M +LP + +I L GK A
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARNNVLPD--VRTYTTLIGGLCKDGKIDEAFRLRD 177
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE---RGITVRDSDYYAF 261
EM + + GC + S +G + LI E +G+ Y
Sbjct: 178 EMENLKLLPHVVTYNMLINGCFECSSSLKG--------FELIDEMEGKGVKPNAVTYNVV 229
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
V KE + + LR + E G+ P + + C G+ E ++ + KGL
Sbjct: 230 VKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGL 289
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
++S ++++ C R++D A L K +D +Y L+ G FK G+
Sbjct: 290 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SX 345
Query: 382 IFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+D MKE +++ S ++ ++ LC + +++ +E+L+ G PD+ TY +I G+
Sbjct: 346 XWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGY 404
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 182/439 (41%), Gaps = 40/439 (9%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ + P + N +LD L ++ ++ A L M +G+ PN+ T++++ C+ G
Sbjct: 74 MKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGW 133
Query: 98 FEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ ++D ++V+ Y +I K G AF +EM N + L P TY+
Sbjct: 134 LKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLK-LLPHVVTYN 192
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++G + ++ M K + P + V++ GK A ++
Sbjct: 193 MLINGCFECSSSLKGFELIDEMEGKGVKPNAVTY--NVVVKWYVKEGKMDNAGNELRKME 250
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ T + K GR+ EA ++ +S +G+ + ++ LC E + +
Sbjct: 251 ESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLD 310
Query: 273 EVCGLLRDVVERGY-------------------------------IPCAMELSRFVASQC 301
+ LL +RGY IP + + C
Sbjct: 311 DAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLC 370
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
GK + + + +L+ GL+ D ++++ YC Q+DKA K+ K D+
Sbjct: 371 RSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLF 430
Query: 362 TYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
T ++L+ GL +G +++A+++F ++ + K + + +F ++S LC +A EM
Sbjct: 431 TCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEM 490
Query: 421 LKMGHKPDEATYKQVISGF 439
+ PD T+ ++S
Sbjct: 491 EEKKLGPDCYTHNAILSAL 509
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
I+ + + G+ V + + + C E++ E GL+ + P + + + C
Sbjct: 35 IFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLC 94
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
KGK E +LL + + GL + + L+ YC + +A + + + DV
Sbjct: 95 KKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVR 154
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
TY L+ GL KDG+++EA R+ D M+ LK++ ++ ++++ K + DEM
Sbjct: 155 TYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM 214
Query: 421 LKMGHKPDEATYKQVISGFM 440
G KP+ TY V+ ++
Sbjct: 215 EGKGVKPNAVTYNVVVKWYV 234
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 144/394 (36%), Gaps = 64/394 (16%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
+I EG+ + +A++ +V+ Y +G + R M GF P N L +
Sbjct: 210 LIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYC 269
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG---------- 108
+ + A + M R G+ N T + + LC K + LL S
Sbjct: 270 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 329
Query: 109 --------------------------IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
I S + Y +I + G + D+ NE+
Sbjct: 330 SYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLES- 388
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
L P +TY++I+ G R + + + MV+K P F + +++ L G
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTC--NILVRGLCTEGMLD 446
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +FK + + T ++ L +EGR +EA + + E+ + + A +
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAIL 506
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYI-----------------------PCAMELSRFVAS 299
+ L + +E + +VE+G + P ++ S +
Sbjct: 507 SALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINE 566
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
C +GK+K+ ++ KG++L SLME
Sbjct: 567 LCTQGKYKDAMHMIQESTQKGIILHKSTYISLME 600
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 20/231 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G VP + N ++ R+ ++ A MV+ P+ FT +++ + LC G +
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKA 448
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
L L + I +V +N +I ++G F AFD L EM + L P T+++IL
Sbjct: 449 LKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEM-EEKKLGPDCYTHNAILS 507
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ + ++ + +VE+ L +S N + S+ + + A E+I
Sbjct: 508 ALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSV---AFSEQI 564
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
L +G+ K+A+ + +++GI + S Y + + L K
Sbjct: 565 N-----------ELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 174/413 (42%), Gaps = 31/413 (7%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ + G VP V +++D + ++ +A + M RDG PN +T++ + L
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Query: 93 CRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ K + LL D I + + Y ++ + DF AF RL EM L P
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF-RLFEMMEQNGLKPD 566
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y+ + D + + E + +V K + L K + + +I S G T A
Sbjct: 567 EHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT---LIDGFSKAGNTDFAAT 620
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +R DE T +L AL K+ R+ EA+ I +S RGI Y ++ +
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 680
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E + + + ++ G+ P A + F+ S C +G+ ++ E+L+ + +G+ D
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L++ ID+A + ++ + TY +LL L K
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN------------ 788
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L V S + S + +L EL + + M+K G P TY +I+GF
Sbjct: 789 --LAYVRS----VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 174/430 (40%), Gaps = 25/430 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G ++ MM + G + L+ L +R A L+ M RDG SPN
Sbjct: 228 YCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPN 287
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
++ + LC+SG+ L D+ G+ SVM YN +I YSK G A ++
Sbjct: 288 VRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL-KIK 346
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E+ P TY++++ G +KTE ++ ++ V++ P + +
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTP---------TVVTFT 396
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISER 249
++ Y F A K ++ C G ++ +L K+ R+KEA ++ + IS
Sbjct: 397 NLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y + ++ CK + + +L+ + G P A + + K +
Sbjct: 457 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LL+ + G++ + ++L++ C D A L +E+ D Y VL D
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
L K GR EEA +++ ++ + ++ A + M+ G PD
Sbjct: 577 LCKAGRAEEAYSFI--VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634
Query: 430 ATYKQVISGF 439
TY ++
Sbjct: 635 YTYSVLLHAL 644
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 191/476 (40%), Gaps = 52/476 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALL----------D 55
+G A + ++ G D ++ M G VP+V NA++ D
Sbjct: 282 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 56 AL---------------YRQNEIRLASC---------LYGAMVRDGVSPNKFTWSLVAQI 91
AL + N + C L V++G +P T++ +
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLING 401
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + KF+ L + + + S +L +I+ KK A + LNE+ + L P
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI-SANGLVP 460
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+SI+DG + K +++ ++ +M P + + ++ L K + A
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS--LMYGLVKDKKLHKAMA 518
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + + I T +L+ E A +++ ++ + G+ + Y + LC
Sbjct: 519 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + EE +V +G + + + G L+ ++D+G DS+
Sbjct: 579 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S L+ C +++++A+ + ++ + Y +L+D + ++G+ + A R+++ M
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Query: 387 KEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM---GHKPDEATYKQVISG 438
S++++ + ++ C L A D +LKM G PD TY +I G
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDA---EDLILKMEREGVAPDVVTYNILIDG 748
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 159/396 (40%), Gaps = 71/396 (17%)
Query: 106 DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY---- 161
D + +V YN +I Y K+GD A + G L P T ++++ G R
Sbjct: 177 DGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEG-GLEPETFTCNALVLGYCRTGELR 235
Query: 162 --------------EKTEVSDRIV--GL---------MVEKKLLPKHFLSGN----DYVI 192
++ E S I+ GL +V ++ + S N ++I
Sbjct: 236 KACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLI 295
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L G+ A ++F + T M+ SK GR+ +A++I L+ + G
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC----------- 301
D Y + LC + + EE LL + V+ G+ P + + + C
Sbjct: 356 PDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414
Query: 302 ------------------------GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
K + KE +ELL+ + GL+ + +S+++ YC
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
+ ++D A+ + +E+ + TY+ L+ GL KD ++ +A+ + M++ ++ + +
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ ++ C + A + + M + G KPDE Y
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAY 570
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 123/325 (37%), Gaps = 37/325 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S S++L + + L + M + G + A L+D + R+ +
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVID 120
A +Y M G P+ T+++ C+ G+ E ++L + G+ V+ YN++ID
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G AF L M G + P + TY LL
Sbjct: 748 GCGHMGYIDRAFSTLKRMV-GASCEPNYWTYC--------------------------LL 780
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEM-----IFKRACDEKIELQDDTCGCMLKALSKEGR 235
KH L GN ++ + G E+ + +R + T ++ K GR
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++EA + + +G++ + Y + C E+ + + E G+ P
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900
Query: 296 FVASQCGKGKWKEVEELLSAVLDKG 320
V C +G +++V+ L +L+ G
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELG 925
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 27/344 (7%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
L+D + A+ L M+ +G +P+ +T+S++ LC+ + L +LD
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Query: 108 -GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
GI ++ Y ++ID ++G A NEM + + P +TY+ ++ + + E
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH-KPSATTYTVFINSYCKEGRLE 721
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ ++ L +E++ + ++ N +I MG A KR E T
Sbjct: 722 DAEDLI-LKMEREGVAPDVVTYN-ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 779
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+LK HL+ VR D N++ + + LL +V+ G
Sbjct: 780 LLK---------------HLLKGNLAYVRSVDTSGMWNLI----ELDITWQLLERMVKHG 820
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P S +A C G+ +E LL + KGL + + L++ C + +KA+
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ + + + +Y +L+ GL +G E+ +F + EL
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 924
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
DM + A +R ++ L L++L++ + ++Y + + G+
Sbjct: 125 DMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV 184
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + CKE R ++E G P + V C G+ ++ L +
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G + + + L++ C + + KA+ L + +++ S +V + L+ GL K GR+
Sbjct: 245 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A +FD M + VV S ++ ++ L + A+K + M K G PD+ TY +
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 436 ISGF 439
I G
Sbjct: 365 IYGL 368
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 121/291 (41%), Gaps = 4/291 (1%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+ L R++ TE R+ +V+ LLP +I+ G A F+
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT--MIKSYCKEGDLTTAHRYFRL 208
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ +E + TC ++ + G +++A ++ ++ G + Y + LC
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 268
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ L + G P + ++ C G+ + L A+ G++ ++
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
++ Y +++ A+ + +EK D TY+ L+ GL D + EEA + + +KE
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +F +++ C ++ A++ ++M+ K D + ++I+ +
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLI 438
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 101/283 (35%), Gaps = 52/283 (18%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+ G + ++ ++ Y +G D ++ M G P V N L+D I
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYS 123
A MV PN +T+ L+ + L + G V + SG M+NL+
Sbjct: 756 DRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSG-----MWNLI----- 804
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+ + L M L P +TYSS++ G + + E + ++ M K L P
Sbjct: 805 ---ELDITWQLLERMVK-HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNE 860
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ ++ K CD K ++A+
Sbjct: 861 DIY------------------TLLIKCCCDTKF-------------------FEKALSFV 883
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
++SE G + Y V LC E E+V L D++E GY
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGY 926
>gi|302814999|ref|XP_002989182.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
gi|300143082|gb|EFJ09776.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
Length = 614
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 180/426 (42%), Gaps = 35/426 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D GL D E+ M G P CN+LLD L++ N++ A LY M R
Sbjct: 13 NIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSR 72
Query: 76 DGVSPNKFTWSLVAQILCRSG-------KFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDF 128
V + FT++++ LC++G K L ++ + ++Y +I K G +
Sbjct: 73 SFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKY 132
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +M P +Y+ ++ + + E + + M KK +P F
Sbjct: 133 DHAMAVFRKM-----KLPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTF-- 185
Query: 189 DYVIQKLSDMGKTYAAEMIFKRA---CDEKIELQ----DDTCGCMLKALSKEGRVKEAIQ 241
+ VIQ LS GK FK A DE + LQ + T G ++ L K R EA
Sbjct: 186 NTVIQSLSKAGK-------FKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAES 238
Query: 242 IYHLISERGITVRDSDYYAF---VNVLCKEHQPEEVCGLLRDVV-ERGYIPCAMELSRFV 297
+ ++ G V D + F ++ LCK ++ E L+R + E G P + +
Sbjct: 239 VLEVMDTVG-CVPDPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAPDEFTFNTII 297
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
G K L + G S ++++ C ++D+A+ L ++
Sbjct: 298 DGHFKAGDSKGALSLFKEMARLGRCRCSVTLNTVVTGLCKAGEVDRAVTL-VRDSASARQ 356
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKN 416
V Y+V++D K GR E + ++F M S +F I+VS C + +A++
Sbjct: 357 ATVFMYNVVIDKFAKLGRFEASKQLFQEMSRFGCHPDSVTFTILVSESCKQRRTHEALEL 416
Query: 417 HDEMLK 422
++M K
Sbjct: 417 VEQMTK 422
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 192/455 (42%), Gaps = 34/455 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ +G +E++R M+V VP + N ++ +L + + + A + MV
Sbjct: 151 NIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEMVW 210
Query: 76 DGVSPNKFTWSLVAQILCRSGK---FEVVLGLLDS-GIYSSV---MYNLVIDFYSKKGDF 128
SPN+ T+ L+ LC++ + E VL ++D+ G +N++I K
Sbjct: 211 LQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDTVGCVPDPNLRTFNIMIHGLCKANKV 270
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
G A + M + + P T+++I+DG + K S + L E L + S
Sbjct: 271 GEADALVRRMEDECGVAPDEFTFNTIIDG---HFKAGDSKGALSLFKEMARLGRCRCSVT 327
Query: 189 -DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+ V+ L G+ A + + + + + ++ +K GR + + Q++ +S
Sbjct: 328 LNTVVTGLCKAGEVDRAVTLVRDSASAR-QATVFMYNVVIDKFAKLGRFEASKQLFQEMS 386
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE-RGYIPCAMELSRFVASQCGKGKW 306
G + V+ CK+ + E L+ + + +G + + + + G+
Sbjct: 387 RFGCHPDSVTFTILVSESCKQRRTHEALELVEQMTKNKGCSWTTLPFNMVLNALAKSGEM 446
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG--SLDVATYD 364
+ ++ ++ G+ D ++L++ Y + + E L + D +++
Sbjct: 447 EAAGKVHRSMKVAGIECDLVTYNTLLDGYFGAGRARSGDGYRVFGELLHSGCAPDTLSFN 506
Query: 365 VLLDGLFKDGRMEEAV-RIFDYMKELK--VVSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
LL L DGR+EEAV + + M+E + + + ++V + C + + A + DEML
Sbjct: 507 ALLGCLCCDGRLEEAVAKFWGEMRERRECWPDAVTHALLVRQCCKQRNIELACRIVDEML 566
Query: 422 KMGHKP----------------DEATYKQVISGFM 440
G P D+A ++Q + F+
Sbjct: 567 HRGFVPTPGIASMLVNLIQSGSDDARHRQWLQSFL 601
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 9/222 (4%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
TC M+ +L K G V +A ++ H + ++G + ++ L K ++ E L +
Sbjct: 11 TCNIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY-EK 69
Query: 282 VERGYIPC-AMELSRFVASQCGKGKWKEVEELLSAVLD--KGLLLDSFCCSSLMEYYCSN 338
+ R ++ A + + C G+ +E + LSA L + + +L+ C
Sbjct: 70 MSRSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKV 129
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
+ D A+A+ K+ KL S+ +Y++++ K GR E AV +F MK K V +F
Sbjct: 130 GKYDHAMAVFRKM-KLPSSM---SYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTF 185
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+ L + ++A+ DEM+ + P+E T+ ++ G
Sbjct: 186 NTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGL 227
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 188/438 (42%), Gaps = 12/438 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
E ++S ++++ Y + + M GFVP + N LL + +
Sbjct: 88 ETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ 147
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVID 120
C + + V + +++ +V + C +G+ F++++ L + G +V +Y +ID
Sbjct: 148 WWCFFNE-SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLID 206
Query: 121 FYSKKGDFGAAFDRLNEMCNGR-NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
KKG+ A D EM G+ L TY+ ++ G + + + M E +
Sbjct: 207 GCCKKGEIEKAKDLFFEM--GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGV 264
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P L + V+ +L G+T A +F + + T ++ L +E + EA
Sbjct: 265 FPN--LHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + GI Y ++ C + + L RD+ RG P + + V+
Sbjct: 323 NEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C KG +++ + ++G+ + L++ + + ++KAI L +E+L + D
Sbjct: 383 FCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPD 442
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHD 418
V TY VL+ G GRM EA R+F M E K + + +V C +A++
Sbjct: 443 VHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFR 502
Query: 419 EMLKMGHKPDEATYKQVI 436
EM + P+ A+Y+ +I
Sbjct: 503 EMEEKELPPNVASYRYMI 520
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 178/404 (44%), Gaps = 19/404 (4%)
Query: 15 LSLVLDCYSHKGLFMDG----------LEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
+ +VLD YS G+ + G ++ +R +GF P V L+D ++ EI
Sbjct: 157 IKVVLDVYSF-GIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVI 119
A L+ M + G+ N++T++++ L ++G FE+ + + G++ ++ YN V+
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ K G AF +EM R ++ TY++++ G R K ++ ++ M +
Sbjct: 276 NQLCKDGRTKDAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P L + +I + K A + + + T ++ K+G A
Sbjct: 335 NPN--LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++ + ERGI Y ++ + E+ L + E G P S +
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHG 452
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C KG+ E L ++++K + ++++ YC +A+ L ++E+ + +
Sbjct: 453 FCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR 403
VA+Y +++ L K+ + +EA + + M + + S S + ++SR
Sbjct: 513 VASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISR 556
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L K G K+ ++Y + E G+ Y +N LCK+ + ++ + ++
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
ERG + + + C + K E E++ + G+ + ++L++ +C R++
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKL 354
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
KA++L ++ S + TY++L+ G K G A ++ M+E + S ++ I+
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTIL 414
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + KA++ M ++G PD TY +I GF
Sbjct: 415 IDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ ++DKG + S C ++L+ + + ++ K+K LDV ++ +++ G +
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCF-FNESKIKVVLDVYSFGIVIKGCCE 175
Query: 373 DGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKELRKAMKNHDEMLKMGHKPD 428
G +E++ FD + EL+ S V++ + L C E+ KA EM K G +
Sbjct: 176 AGEIEKS---FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVAN 232
Query: 429 EATYKQVISGFM 440
E TY +I G
Sbjct: 233 EWTYTVLIHGLF 244
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 182/456 (39%), Gaps = 62/456 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V + L+ + + + A Y AMV G+ N S + Q + G V
Sbjct: 30 GSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEV 89
Query: 102 LGLL----DSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSIL 155
+ DSG++ V+YN+ +D Y K G+ A LNEM C G LTP Y+ ++
Sbjct: 90 IAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGG--LTPDKIHYTCLI 147
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + + ++ M++ + P + + + G + R D
Sbjct: 148 NGYCLKGEMQNAQQVFEEMLKANIEPD--IVTYNILASGFCKSGLVMEVFDLLDRMADHG 205
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT-----------------VRDSDY 258
+E T G + + G + EA +++++ E+GI D Y
Sbjct: 206 LEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAY 265
Query: 259 YAFVNV------------------LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
FV V LC+ + + + ++E +P + S+ ++
Sbjct: 266 MLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIY 325
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + ++ +GL +D + LM YC ++ +A L +++ L DV
Sbjct: 326 CQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDV 385
Query: 361 ATYDVLLDGLFKDGRME--EAV--------------RIFDYMKELKVVSS-SSFVIVVSR 403
Y VLLDG K+ + E + ++ MK++++ + +++
Sbjct: 386 IAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDG 445
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + L +A + DEML+ G PD Y +I+G+
Sbjct: 446 KCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 481
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ LCKE + +E LL + +G P S + S C G + + A++
Sbjct: 3 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G+ + S L++ + + IA +K + LD Y++ +D K+G M
Sbjct: 63 SHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 122
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EAV++ + MK + + +++ C E++ A + +EMLK +PD TY +
Sbjct: 123 EAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182
Query: 437 SGF 439
SGF
Sbjct: 183 SGF 185
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 137/364 (37%), Gaps = 30/364 (8%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C G + +++ Y KG + +V+ M P + N L + +
Sbjct: 133 CGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVM 192
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDS-GI-YSSVMYNLVI 119
L M G+ PN T+ + CR G EV+ +++ GI + VMY+ ++
Sbjct: 193 EVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMV 252
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
Y G A+ + NL FS S +++ R + + + +M+E +
Sbjct: 253 CGYLLSGWTDHAYMLFVRVARQGNLVDHFSC-SKLINDLCRVGNVQGASNVCKIMLEHNV 311
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P + +I G A + F + + ++ K GR++EA
Sbjct: 312 VPD--VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEA 369
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL-------------------LRD 280
Q++ ++ GI Y ++ KE + G+ ++D
Sbjct: 370 CQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKD 429
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ +PC + + +C E EL +L KGL D++ ++L+ YCS +
Sbjct: 430 MQIEPDVPC---YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGE 486
Query: 341 IDKA 344
I KA
Sbjct: 487 ISKA 490
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 110/253 (43%), Gaps = 31/253 (12%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GL 104
+C+ L++ L R ++ AS + M+ V P+ ++S + I C++G + +
Sbjct: 282 SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 341
Query: 105 LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
+ G+ V+ Y ++++ Y K G A +M N + P Y+ +LDG + K
Sbjct: 342 VQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTN-LGIKPDVIAYTVLLDG---HLK 397
Query: 164 TEVSDRIVGLMVEKKLLPKHFL--SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ G+ E++ FL + ++ ++ + DM +IE
Sbjct: 398 ETLQQGWEGIAKERR----SFLLRANHNKLLSSMKDM----------------QIEPDVP 437
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
++ K + EA +++ + ++G+T Y A +N C + + + LL+++
Sbjct: 438 CYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 497
Query: 282 VERGYIPCAMELS 294
+++G P + S
Sbjct: 498 IDKGIEPDELTFS 510
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 170/394 (43%), Gaps = 35/394 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
SLV + H L++ + M G P + CN L+++ + I A + +++
Sbjct: 71 SLVKSKHYHTVLYLS-----QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILK 125
Query: 76 DGVSPNKFTWSLVAQILCRSGKF------------------EVVLGLLDSGIYSSVMYNL 117
G PN T + + + LC +GK +++L ++ +Y+ + +
Sbjct: 126 MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT---FTI 182
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
++D + K+G A + L M + + PG TY+S++DG ++ + I M +
Sbjct: 183 LVDGFCKEGRVKEAKNVL-AMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL 241
Query: 178 KLLP---KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ P + + N + K+ D EM K+ + T ++ L K G
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV-----TYSSLIDGLCKSG 296
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
++ A+++ + +RG Y + ++ LCK HQ + LL + +G P +
Sbjct: 297 KISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYT 356
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C GK ++ ++ +L KG L+ + + +++ +C D+A+ L K+E
Sbjct: 357 ILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDN 416
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+ TY++++ LFK E A ++ M E
Sbjct: 417 GCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 162/400 (40%), Gaps = 28/400 (7%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
+ F+P S + N++ A L+ +++ +P ++ + L +S +
Sbjct: 25 FNFIPYFSTSTTF----HNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHT 80
Query: 101 VLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
VL L + + NLV +N C ++ FS + IL +
Sbjct: 81 VLYLSQKMEFRGIKPNLV-----------NCNILINSFCQLGHIPSAFSVLTKILKMGYK 129
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
++ I GL + K+ KH + G KL D A +F + E I
Sbjct: 130 PNTITLNTLIKGLCLNGKIHDKHCIVG------KLKD------AVDLFNKMILENINPDV 177
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ KEGRVKEA + ++ +GI Y + ++ Q + +
Sbjct: 178 YTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNT 237
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + G P S + C E ELL + K ++ + SSL++ C + +
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK 297
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVI 399
I A+ L ++ ++ TY +LD L K+ +++ A+ + MK + + ++ I
Sbjct: 298 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC +L A K +++L GH + TY +I GF
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 183/456 (40%), Gaps = 62/456 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V + L+ + + + A Y AMV G+ N S + Q + G V
Sbjct: 30 GSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEV 89
Query: 102 LGLL----DSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSIL 155
+ DSG++ V+YN+ +D Y K G+ A LNEM C G LTP Y+ ++
Sbjct: 90 IAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGG--LTPDKIHYTCLI 147
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G + + + ++ M++ + P + + + G + R D+
Sbjct: 148 NGYCLKGEMQNAQQVFEEMLKANIEPD--IVTYNILASGFCKSGLVMEVFDLLDRMADQG 205
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT-----------------VRDSDY 258
+E T G + + G + EA +++++ E+GI D Y
Sbjct: 206 LEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAY 265
Query: 259 YAFVNV------------------LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
FV V LC+ + + + ++E +P + S+ ++
Sbjct: 266 MLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIY 325
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G + ++ +GL +D + LM YC ++ +A L +++ L DV
Sbjct: 326 CQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDV 385
Query: 361 ATYDVLLDGLFKDGRME--EAV--------------RIFDYMKELKVVSS-SSFVIVVSR 403
Y VLLDG K+ + E + ++ MK++++ + +++
Sbjct: 386 IAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDG 445
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + L +A + DEML+ G PD Y +I+G+
Sbjct: 446 KCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 481
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ LCKE + +E LL + +G P S + S C G + + A++
Sbjct: 3 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G+ + S L++ + + IA +K + LD Y++ +D K+G M
Sbjct: 63 SHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 122
Query: 378 EAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
EAV++ + MK + + +++ C E++ A + +EMLK +PD TY +
Sbjct: 123 EAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182
Query: 437 SGF 439
SGF
Sbjct: 183 SGF 185
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 137/364 (37%), Gaps = 30/364 (8%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C G + +++ Y KG + +V+ M P + N L + +
Sbjct: 133 CGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVM 192
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDS-GI-YSSVMYNLVI 119
L M G+ PN T+ + CR G EV+ +++ GI + VMY+ ++
Sbjct: 193 EVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMV 252
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
Y G A+ + NL FS S +++ R + + + +M+E +
Sbjct: 253 CGYLLSGWTDHAYMLFVRVARQGNLVDHFSC-SKLINDLCRVGNVQGASNVCKIMLEHNV 311
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P + +I G A + F + + ++ K GR++EA
Sbjct: 312 VPD--VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEA 369
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL-------------------LRD 280
Q++ ++ GI Y ++ KE + G+ ++D
Sbjct: 370 CQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKD 429
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ +PC + + +C E EL +L KGL D++ ++L+ YCS +
Sbjct: 430 MQIEPDVPC---YTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGE 486
Query: 341 IDKA 344
I KA
Sbjct: 487 ISKA 490
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GL 104
+C+ L++ L R ++ AS + M+ V P+ ++S + I C++G + +
Sbjct: 282 SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 341
Query: 105 LDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
+ G+ V+ Y ++++ Y K G A +M N + P Y+ +LDG + K
Sbjct: 342 VQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTN-LGIKPDVIAYTVLLDG---HLK 397
Query: 164 TEVSDRIVGLMVEKKLLPKHFL--SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
+ G+ E++ FL + ++ ++ + DM +IE
Sbjct: 398 ETLQQGWEGIAKERR----SFLLRANHNKLLSSMKDM----------------QIEPDVP 437
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
++ K + EA +++ + ++G+T Y A +N C + + + LL+++
Sbjct: 438 CYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 497
Query: 282 VERGYIPCAMELSR 295
+++G P + S
Sbjct: 498 IDKGIEPDELTFSE 511
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 170/401 (42%), Gaps = 69/401 (17%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S+++ Y+ G+ +E + M+ +G P V N++L + ++ LA +Y M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
++ +PN+ T+ ++ LC++GK + L + D ++KG
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDE--------------MTQKG------- 231
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+ P Y+ IL G + ++T+ R++ M +SG
Sbjct: 232 ----------IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK---------VSG------ 266
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
C + I TC +L K G++ EA + L + G +
Sbjct: 267 -----------------CCPDSI-----TCNALLDGFCKLGQIDEAFALLQLFEKEGYVL 304
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y + ++ L + + +EV R + + G P + + + C G +L
Sbjct: 305 GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML 364
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ + +GL D++C ++L++ +C +DKA +L ++I K TY +L+ G+ ++
Sbjct: 365 NDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRN 424
Query: 374 GRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
G ++EA +IF+ M+ L S +F ++ LC EL +A
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 195/473 (41%), Gaps = 66/473 (13%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L K +F+ L VY M + P + LL+ L + + A ++ M + G
Sbjct: 172 ILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKG 231
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAF 132
+ PN ++++ LC++ + + V LL++ S S+ N ++D + K G AF
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAF 291
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDR------IVGLMVEKKLLPKH 183
L ++ G YSS++DG A+RY++ + R I +V +L +
Sbjct: 292 ALL-QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350
Query: 184 F--LSGNDYVIQKLSDMGK------TYAAEMIFKRACDE---------KIELQDDTC--- 223
F + DY + L+DM + TY + K CD ++E+ + C
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPT 410
Query: 224 ----GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ + + G + EA QI++ + G + + A ++ LCK + EE L
Sbjct: 411 SCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFY 470
Query: 280 DVVERGYIPC--------------AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ E G P L V C G + +LL + D G++ D
Sbjct: 471 KM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ L+ +C + I+ A L +++ S D TY L+DG + R E+A R+ D
Sbjct: 530 MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQ 589
Query: 386 M-KELKVVSSSSFVIVVSRLCH-----------LKELRKAMKNHDEMLKMGHK 426
M K SS+ + +++ C LK LR DE LK+ +
Sbjct: 590 MVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEE 642
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 138/333 (41%), Gaps = 45/333 (13%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
S V +NLVID +K F + L E+ N P T+S ++ Y K+ ++++
Sbjct: 95 SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPP-PTFSVLIAA---YAKSGMAEKA 150
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
V K+ D G C + T +L +
Sbjct: 151 VE------------------SFGKMKDFG------------CKPDVF----TYNSILHVM 176
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
++ A+ +Y+ + + + + +N LCK + ++ + ++ ++G P
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
M + ++ C + +V LL+ + G DS C++L++ +C QID+A AL
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAV----RIFDYMKELKVVSSSSFVIVVSRLCH 406
EK L + Y L+DGLF+ R +E ++F E VV + I++ C
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVV---LYTILIRGFCE 353
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + A+ ++M + G PD Y +I GF
Sbjct: 354 VGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 154/366 (42%), Gaps = 55/366 (15%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
GL + +++ M G P++ NAL+D L + E+ A L+ M G +P+ F
Sbjct: 423 RNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLF 481
Query: 84 ------------TWSLVAQI--LCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSK 124
T SL + LC SG +++++ L DSG+ +M YN++I+ + K
Sbjct: 482 LRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCK 541
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH- 183
+ AF E+ + +P TY +++DG R ++ E + R++ MV+ P
Sbjct: 542 AKNINGAFKLFREL-QLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSA 600
Query: 184 -FLSGNDYVIQKLSDMGKTYAAEMIFKRAC----DEKIELQDD---------TCGCMLK- 228
+ + +K + ++ + + R+ DE ++L ++ C+L+
Sbjct: 601 VYKCLMTWSCRK-GKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEM 659
Query: 229 -----------------ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
L + R +EA++I+ ++ E + V +N LCK+
Sbjct: 660 NFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNL 719
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E + +E+G++ ++ + S + K K +LL+ + G LD + +
Sbjct: 720 EMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRI 779
Query: 332 MEYYCS 337
Y S
Sbjct: 780 KSYLLS 785
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 163/407 (40%), Gaps = 35/407 (8%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E R M G P V L+ + A + M + G+SP+ + ++ + +
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386
Query: 93 CRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C G + L + +S Y ++I + G A N+M N +P
Sbjct: 387 CDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMEN-LGCSPS 445
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL---SGNDYV---------IQKL 195
T+++++DG + + E + + M E P FL G D V +++L
Sbjct: 446 IMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERL 504
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+ G A + + D + T ++ K + A +++ + +G +
Sbjct: 505 CESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDS 564
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK-------WKE 308
Y ++ + + E+ +L +V+ G P + + C KGK W +
Sbjct: 565 VTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + D+ L L E + +++KA+ +++ + ++A Y + L
Sbjct: 625 YLRSLPSQEDETL--------KLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLI 676
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
GL + R EEA++IF +KE ++ V+ S V++++ LC L A+
Sbjct: 677 GLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAV 723
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I + G AE + +R + + T G +++ L + GR+++A ++ +
Sbjct: 279 NTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG 338
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ + ++ CK+ E + L R++ ERG P A+ + V C K
Sbjct: 339 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ + GL D+ ++L++ YC ++D A+ + + LD TY L+
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
GL K GR +A R+ M E + ++++ +V+ C +++ ++ EM G KP
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518
Query: 428 DEATYKQVISGF 439
TY +++GF
Sbjct: 519 GVVTYNVIMNGF 530
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 153/333 (45%), Gaps = 21/333 (6%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ M+ G V + N ++ + R ++ A L+ M GV+P+ +T+ + Q L
Sbjct: 261 NVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGL 320
Query: 93 CRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
CR G+ E G+ + G+ ++V++ ++ID + KKGD + EM R + P
Sbjct: 321 CRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPD 379
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAA 204
TY++I++G R + + IV M L P + Y ++ DM
Sbjct: 380 AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQ 439
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M+ E + L + T ++ LSK GR +A ++ + E G+ ++ Y ++
Sbjct: 440 NMVA-----EGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 494
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
C++ + LL+++ +G P + + + C G+ K + LL+A+++ G+ D
Sbjct: 495 FCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPD 554
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ L++ +C + ++ IE+LK +
Sbjct: 555 DITYNILLDGHCKHGKV-------TDIEELKSA 580
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 172 GLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
GL E KL + +++ L +G+ +A+ +F + + M+ +
Sbjct: 235 GLPPEAKLF--------NVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 286
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+ G + A ++ +SE G+T Y A + LC+ + E+ G+ + RG P A+
Sbjct: 287 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 346
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ + + C KG + + EL + ++G+ D+ ++++ C R + A + +++
Sbjct: 347 VFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 406
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKEL 410
D TY L+DG K+ ++ A+ I M V + ++ ++S L
Sbjct: 407 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 466
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A + EM++ G +PD TY VI F
Sbjct: 467 ADAERVLGEMMEAGLEPDNTTYTMVIDAF 495
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 160/386 (41%), Gaps = 57/386 (14%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P AC +L AL R + SC G M R +P +
Sbjct: 187 GLLP--DACTLVLLALRRGIRLEPTSC-TGLMSRFPTAPEACAF---------------Y 228
Query: 102 LGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARR 160
L LLD+G+ ++N+++ + G+ +A + +EM R + ++++++ G R
Sbjct: 229 LQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEM-QSRGVRRTVVSFNTMISGMCR 287
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
+ ++ + M E + P + G +IQ L +G+ A +F++ C ++
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYG--ALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 345
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ A K+G + ++++ + ERG+ Y A VN LC+ + G++ +
Sbjct: 346 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 405
Query: 281 VVERGYIP-------------------CAMELSR-FVASQCG---------------KGK 305
+ G P AME+ + VA G G+
Sbjct: 406 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 465
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ E +L +++ GL D+ + +++ +C + + L +++ V TY+V
Sbjct: 466 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 525
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV 391
+++G K G+M+ A + + M + V
Sbjct: 526 IMNGFCKLGQMKNADMLLNAMINIGV 551
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++V+D + KG GL + + M+ G P V N +++ + +++ A
Sbjct: 480 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 539
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL-------LDSGIYSSVMYNLV 118
L AM+ GVSP+ T++++ C+ GK + L D G+Y+S++ +V
Sbjct: 540 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGEIV 598
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 189/444 (42%), Gaps = 17/444 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + S +++ G + ++ R M ++G +P C + AL
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L+ M G PN +T++ + LC SG +V +GL D ++V YN +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Query: 121 FYSKKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ AF LN M GRN +P TY+ ++ G + D ++V +
Sbjct: 399 ILVENRRIKYAFVVLNLM--GRNGCSPNIVTYNEMIKG-----YCILGDPKKAMLVMNNM 451
Query: 180 LPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L + L + +I+ D G T +A I D + + + ++ K ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ A +++ + + G+ + Y A ++ CK+ + + LL + G P +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ + + EEL ++++G+ + +++++ C N A+ + K+ +
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
++ TY L+ L ++G++EEA +F ++ ++ ++V ++ ++ A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
M+K G +P TY +I G
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 181/447 (40%), Gaps = 65/447 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I+SC +++ + +S LD S GL M GL Y + ++ ++A A++D +R
Sbjct: 151 LIKSCHSKEAMARTMSF-LDMLSQSGLRM-GLFAYSALLIHLSRLGMTA--AVMDRYHR- 205
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM------ 114
M+ +GV PN ++ V LC+ G ++ ++ S M
Sbjct: 206 ------------MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK-VFESEMSPDTFT 252
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +I + +K D +A N+M P TYS++++G + + ++ M
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 175 VEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ +LP H +G I L DMG A +F ++ E T ++ L
Sbjct: 312 ILHGILPTAHTCTGP---IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 368
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G +K AI ++H +S G+ Y A +N+L + + + +L + G P +
Sbjct: 369 GLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C G K+ +++ +L +G
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRG--------------------------------- 455
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
S ++ TY+ ++ G G A+RI D M++ S+ ++ C + ++
Sbjct: 456 --HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A +EM+ G P+E TY +I G+
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGY 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 176/463 (38%), Gaps = 66/463 (14%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + ++ Y G L + +MR G P + L+ + +++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDF 121
L+ MV DG+ PN+ T++ + C+ K + LL+ SG +V YN++I
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
+K+ +F A + L ++ + P TY++++DG + T ++ + M+E+ LP
Sbjct: 575 LTKQNNFSGA-EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
L +I+ L GK AE +F + + T M++A G+V+ A
Sbjct: 634 N--LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQ-PEEVCGLLRDVVER---GYIPCAMEL---- 293
+ + G Y + L E+ ++ L DVV GY +
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751
Query: 294 ----------------SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
+ V++ G+W E ELL +++ +GL D +SL+
Sbjct: 752 SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
R +D A+ G+FK + + KEL
Sbjct: 812 VRNVDLAM-----------------------GVFKHMSTQGCEVHLNGYKEL-------- 840
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ LC L ++A + ML PD+ +I G +
Sbjct: 841 ---ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLL 880
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 161/393 (40%), Gaps = 21/393 (5%)
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 118
R++++ A ++ M ++G PN T+S + LC SG+ L I +++ ++
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL----IREMILHGIL 317
Query: 119 IDFYSKKGDFGAAFD--------RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++ G A D RL + P TY++++ G +V+ +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA---AEMIFKRACDEKIELQDDTCGCML 227
M + P + ++ N + + + YA ++ + C I ++ M+
Sbjct: 378 FHRMSRDGVFP-NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE----MI 432
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
K G K+A+ + + + +RG + Y + C +L + + G
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + C K + L + ++D GL + ++L++ YC + ++D A +L
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
+++ +V TY+VL+ GL K A + M E + + ++ ++ LC
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
A++ ++M++ G P+ TY +I
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 206/507 (40%), Gaps = 99/507 (19%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQN------EIRLASCLYGAMVR---DGVSP 80
D L+++ ++ + +V+A N LL A+ R + E +L L+ MVR D V+P
Sbjct: 134 DALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAP 193
Query: 81 NKFTWSLVAQILCRSGKFE---VVLGL-LDSG---------------------------- 108
++ T+S++ CR G+ E V GL L +G
Sbjct: 194 DRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL 253
Query: 109 ---------IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT--PGFSTYSSILDG 157
+ V YN ++ + + A + L+ M + + L+ P +Y+++++G
Sbjct: 254 LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVING 313
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
R + + + + M+++ + P + + VI L A+ +F++ D+ ++
Sbjct: 314 FFREGQVDKAYNLFLQMIDRGIPPD--VVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVK 371
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
+ T C++ G+ KE +++ +S + Y ++ LCK + E +
Sbjct: 372 PSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNI 431
Query: 278 LRDVVERGYIPCAM-------------------------------ELSRF---------- 296
V+ +G P AM +L R
Sbjct: 432 FDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQM 491
Query: 297 ---VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
V C KW++ EEL+ +LD+G+ LD ++LM C ++ +A L + +
Sbjct: 492 INEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLR 551
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
+ DV +Y+ L+DG GR +EA ++ D M + + + ++ ++ C + +
Sbjct: 552 VGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDD 611
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A EML G PD TY ++ G
Sbjct: 612 AYSLLREMLMNGPTPDVVTYNTILHGL 638
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 189/448 (42%), Gaps = 47/448 (10%)
Query: 6 EGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
+G D +S V++ + +G ++ M G P V N ++D L + +
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVV 355
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLV 118
A ++ M+ GV P+ T++ + +GK++ V+ LL+ + +Y L+
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+D+ K G R E RN+ S I G + + + I M ++
Sbjct: 416 LDYLCKNG-------RCTE---ARNIFD-----SVIRKGIKPDAMIDEAVCIFDKMRQQG 460
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L P G +I L +G+ A + F + +E L C ++ K
Sbjct: 461 LSPNVVNYG--ALIDALCKLGRVDDAILKFNQMINEVYGL------CTVEKWEK------ 506
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A ++ + ++GI + + + LC+E + E L+ ++ G P + + V
Sbjct: 507 AEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVD 566
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C G+ E +LL ++ GL + F ++L+ YC R+ID A +L ++ +
Sbjct: 567 GHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTP 626
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS------SFVIVVSRLCHLKELRK 412
DV TY+ +L GLF+ GR EA ++ L +++S ++ I+++ LC + +
Sbjct: 627 DVVTYNTILHGLFQTGRFSEAKELY-----LNMINSRTQWDMYTYNIILNGLCKNNCVDE 681
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGFM 440
A K + G + T+ +I +
Sbjct: 682 AFKMFQSLCSKGLQLHIITFNIMIGALL 709
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N L+ L R+ + A L M+R GV P+ +++ + C +G+ + LLD +
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586
Query: 111 -----SSVMYNLVIDFYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKT 164
+ YN ++ Y K A+ L EM NG TP TY++IL G + +
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP--TPDVVTYNTILHGLFQTGRF 644
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
+ + M+ + + + + ++ L A +F+ C + ++L T
Sbjct: 645 SEAKELYLNMINSRT--QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFN 702
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M+ AL K G+ ++A+ ++ IS G+ Y L KE EE+ L + E
Sbjct: 703 IMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEEN 762
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
G P + L+ V +G LS + +K L++ S L+ Y
Sbjct: 763 GTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLY 813
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 36/247 (14%)
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
S +G + M+ R C +K+ T ++ + GR++ ++ LI + G V
Sbjct: 173 SQLGISLFDRMV--RECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNH 230
Query: 256 SDYYAFVNVLCKEHQPEEVCG-LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
+ + LC + +E LL + E G P + + V C + + +E ELL
Sbjct: 231 IVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLH 290
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ D + L DV +Y+ +++G F++G
Sbjct: 291 VMADD--------------------------------QGLSCPPDVVSYNTVINGFFREG 318
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++++A +F M + + ++ V+ LC + + +A +ML G KP TY
Sbjct: 319 QVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYN 378
Query: 434 QVISGFM 440
+I G++
Sbjct: 379 CLIHGYL 385
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 181/451 (40%), Gaps = 26/451 (5%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEV-YRMMRVYGFVPAVSACNALLDALYRQNE 62
S G L ++ Y+ G+ ++ R+ YG +P V+ CN LL L Q
Sbjct: 1068 SLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRR 1127
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNL 117
A LY M+ + ++ ++ + LC + E L L+++ I V YN+
Sbjct: 1128 WDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNV 1187
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
+ID Y ++GD G L EM + P TY S+++ + E +I L +E
Sbjct: 1188 LIDGYCRRGDMGRGLLLLGEM-ETKGFLPTLVTYGSLINWLGKKGDLE---KIGSLFLEM 1243
Query: 178 KLLPKHFLSGN----DYVIQKLSDMGKTYAAEMIFKR----ACDEKIELQDDTCGCMLKA 229
+ K S N + VI L A +I K+ CD I T ++
Sbjct: 1244 R---KRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDI----ITFNTLITG 1296
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC 289
L EG V++A R + Y ++ C + LL +++ RG+ P
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356
Query: 290 AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + GK E + + ++ + D + L+ C R + A +
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLK 408
++ + D Y L+DG + + +A +IF++M+ + S ++ C
Sbjct: 1417 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFG 1476
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A+ M K+G PDE TY VISG+
Sbjct: 1477 MMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1507
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L K+G +++ ++ + +RG + Y + ++ LCK + +L+ +
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P + + + C +G ++ E L + + L + + L+ +C ++
Sbjct: 1279 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1338
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIV 400
A L +++ + DV T+ L+ GL G++ EA+ + + M E +V + + ++
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+S LC + L A +EML+ +PDE Y +I GF+
Sbjct: 1399 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFI 1438
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 179/431 (41%), Gaps = 11/431 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y +G GL + M GF+P + +L++ L ++ ++ L+ M +
Sbjct: 1186 NVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1245
Query: 76 DGVSPNKFTWSLVAQILC--RSGKFEVVL--GLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
G SPN ++ V LC RS +V+ + SG ++ +N +I +G
Sbjct: 1246 RGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 1305
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG-ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L E R L P +Y+ ++ G R E SD +V +M + P G
Sbjct: 1306 AEHFLREAIR-RELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM-GRGHTPDVVTFG-- 1361
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I L GK A ++ ++ + ++ + ++ L K+ + A I + E+
Sbjct: 1362 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ + Y ++ + + + + +G P + + + C G E
Sbjct: 1422 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEA 1481
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+S + G + D F ++++ Y ++ A+ + K K +V TY L++G
Sbjct: 1482 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLING 1541
Query: 370 LFKDGRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K G + A +F M+ E + ++ I++ L ++ +A + ML P+
Sbjct: 1542 YCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1601
Query: 429 EATYKQVISGF 439
+ T +++G
Sbjct: 1602 DVTLHYLVNGL 1612
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 166/410 (40%), Gaps = 28/410 (6%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMD-----GLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
G+DS +D S C +GL ++ GL++ G +P V N L+D R+
Sbjct: 1140 GKDSGADNYS---TCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRG 1196
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDSGIYSSV-MYN 116
++ L G M G P T+ + L + G E + L + G +V +YN
Sbjct: 1197 DMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYN 1256
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
VID K A L +M P T+++++ G ++ + +
Sbjct: 1257 SVIDALCKCRSATQAMVILKQMF-ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIR 1315
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
++L P +I G+ A + T G ++ L G+V
Sbjct: 1316 RELNPNQL--SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1373
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP----CAME 292
EA+ + ++ER + + Y ++ LCK+ +L +++E+ P A
Sbjct: 1374 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ F+ S+ G +++ E + KG+ D C+++++ YC + +AI +
Sbjct: 1434 IDGFIRSE-NLGDARKIFEFME---HKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1489
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMK---ELKVVSSSSFV 398
K+ D TY ++ G K G + A+R D +K + VV+ SS +
Sbjct: 1490 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1539
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 168/465 (36%), Gaps = 73/465 (15%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
MR GF P V N+++DAL + A + M G P+ T++ + LC G
Sbjct: 1243 MRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 1302
Query: 98 FEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L I + + Y +I + +G+ A D L EM GR TP T+
Sbjct: 1303 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM-GRGHTPDVVTFG 1361
Query: 153 SILDG-----------ARRYEKTE------------------------VSDRIVGLMVEK 177
+++ G R + TE + I+ M+EK
Sbjct: 1362 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421
Query: 178 KLLPKHFLSGN--DYVI--QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ P F+ D I + L D K + M K C + + +C M+K +
Sbjct: 1422 NVQPDEFVYATLIDGFIRSENLGDARKIFEF-MEHKGICPDIV-----SCNAMIKGYCQF 1475
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR---DVVERGYIPCA 290
G + EAI + + G D + + V+ + + G LR D+++R P
Sbjct: 1476 GMMSEAILCMSNMRKVGCI---PDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNV 1532
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA------ 344
+ S + C G E L + + + L + + L+ ++ +A
Sbjct: 1533 VTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFET 1592
Query: 345 ----------IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
+ LH + L + + G+ V + ++ +
Sbjct: 1593 MLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN 1652
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S++ ++ LC LR+A+ + M K G+ P+ T+ ++ GF
Sbjct: 1653 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGF 1697
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 121/326 (37%), Gaps = 57/326 (17%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +++ M G P + +CNA++ C +G M
Sbjct: 1445 DARKIFEFMEHKGICPDIVSCNAMIKGY----------CQFGMMSE-------------- 1480
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
ILC S +V I Y VI Y+K+G+ A L +M R P
Sbjct: 1481 AILCMSNMRKV------GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK-RKCKPNVV 1533
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK----HFLSGNDYVIQKLSDMGKTYAAE 205
TYSS+++G + T+ ++ + M + L P L G+ + K+ G Y
Sbjct: 1534 TYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG-LYFET 1592
Query: 206 MIFKRACDEKIELQDDTCG------CMLKAL---SKEGRVKEAIQIY--HLISERGITVR 254
M+ + L G C++ ++ + E K+A+ + L+ + G R
Sbjct: 1593 MLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPR 1651
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK---WKEV-- 309
+S Y A + LC+ + E + ++GY+P + + C GK W+ +
Sbjct: 1652 NSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILP 1711
Query: 310 ----EELLSAVLDKGLLLDSFCCSSL 331
+E + L D + S+
Sbjct: 1712 NEFQQEEFEIIFRYKFLFDQYATESV 1737
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 174/413 (42%), Gaps = 31/413 (7%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ + G VP V +++D + ++ +A + M RDG PN +T++ + L
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Query: 93 CRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ K + LL D I + + Y ++ + DF AF RL EM L P
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF-RLFEMMEQNGLKPD 566
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y+ + D + + E + +V K + L K + + +I S G T A
Sbjct: 567 EHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT---LIDGFSKAGNTDFAAT 620
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +R DE T +L AL K+ R+ EA+ I +S RGI Y ++ +
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 680
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E + + + ++ G+ P A + F+ S C +G+ ++ E+L+ + +G+ D
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L++ ID+A + ++ + TY +LL L K
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN------------ 788
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L V S + S + +L EL + + M+K G P TY +I+GF
Sbjct: 789 --LAYVRS----VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 174/430 (40%), Gaps = 25/430 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G ++ MM + G + L+ L +R A L+ M RDG SPN
Sbjct: 228 YCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPN 287
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
++ + LC+SG+ L D+ G+ SVM YN +I YSK G A ++
Sbjct: 288 VRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL-KIK 346
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E+ P TY++++ G +KTE ++ ++ V++ P + +
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTP---------TVVTFT 396
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISER 249
++ Y F A K ++ C G ++ +L K+ R+KEA ++ + IS
Sbjct: 397 NLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y + ++ CK + + +L+ + G P A + + K +
Sbjct: 457 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LL+ + G++ + ++L++ C D A L +E+ D Y VL D
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
L K GR EEA +++ ++ + ++ A + M+ G PD
Sbjct: 577 LCKAGRAEEAYSFI--VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634
Query: 430 ATYKQVISGF 439
TY ++
Sbjct: 635 YTYSVLLHAL 644
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 191/476 (40%), Gaps = 52/476 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALL----------D 55
+G A + ++ G D ++ M G VP+V NA++ D
Sbjct: 282 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 56 AL---------------YRQNEIRLASC---------LYGAMVRDGVSPNKFTWSLVAQI 91
AL + N + C L V++G +P T++ +
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLING 401
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + KF+ L + + + S +L +I+ KK A + LNE+ + L P
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI-SANGLVP 460
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+SI+DG + K +++ ++ +M P + + ++ L K + A
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS--LMYGLVKDKKLHKAMA 518
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + + I T +L+ E A +++ ++ + G+ + Y + LC
Sbjct: 519 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + EE +V +G + + + G L+ ++D+G DS+
Sbjct: 579 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S L+ C +++++A+ + ++ + Y +L+D + ++G+ + A R+++ M
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Query: 387 KEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM---GHKPDEATYKQVISG 438
S++++ + ++ C L A D +LKM G PD TY +I G
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDA---EDLILKMEREGVAPDVVTYNILIDG 748
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 177/426 (41%), Gaps = 51/426 (11%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLD 106
N L +L R + +Y +V+DG+ P+ T++ + + C+ G LL+
Sbjct: 152 NFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLE 211
Query: 107 SGIYSSVMY-NLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYE 162
G+ N ++ Y + G+ A F + M RN +Y+ ++ G E
Sbjct: 212 GGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRN----EYSYTILIQGL--CE 265
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
V + +V ++ K+ + ++I L G+ A ++F + T
Sbjct: 266 AKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 325
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
M+ SK GR+ +A++I L+ + G D Y + LC + + EE LL + V
Sbjct: 326 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAV 384
Query: 283 ERGYIPCAMELSRFVASQC-----------------------------------GKGKWK 307
+ G+ P + + + C K + K
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
E +ELL+ + GL+ + +S+++ YC + ++D A+ + +E+ + TY+ L+
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 504
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GL KD ++ +A+ + M++ ++ + ++ ++ C + A + + M + G K
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564
Query: 427 PDEATY 432
PDE Y
Sbjct: 565 PDEHAY 570
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 123/325 (37%), Gaps = 37/325 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S S++L + + L + M + G + A L+D + R+ +
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVID 120
A +Y M G P+ T+++ C+ G+ E ++L + G+ V+ YN++ID
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G AF L M G + P + TY LL
Sbjct: 748 GCGHMGYIDRAFSTLKRMV-GASCEPNYWTYC--------------------------LL 780
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEM-----IFKRACDEKIELQDDTCGCMLKALSKEGR 235
KH L GN ++ + G E+ + +R + T ++ K GR
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++EA + + +G++ + Y + C E+ + + E G+ P
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900
Query: 296 FVASQCGKGKWKEVEELLSAVLDKG 320
V C +G +++V+ L +L+ G
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELG 925
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 27/344 (7%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
L+D + A+ L M+ +G +P+ +T+S++ LC+ + L +LD
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Query: 108 -GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
GI ++ Y ++ID ++G A NEM + + P +TY+ ++ + + E
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH-KPSATTYTVFINSYCKEGRLE 721
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ ++ L +E++ + ++ N +I MG A KR E T
Sbjct: 722 DAEDLI-LKMEREGVAPDVVTYN-ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 779
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+LK HL+ VR D N++ + + LL +V+ G
Sbjct: 780 LLK---------------HLLKGNLAYVRSVDTSGMWNLI----ELDITWQLLERMVKHG 820
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P S +A C G+ +E LL + KGL + + L++ C + +KA+
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ + + + +Y +L+ GL +G E+ +F + EL
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 924
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
DM + A +R ++ L L++L++ + ++Y + + G+
Sbjct: 125 DMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV 184
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + CKE R ++E G P + V C G+ ++ L +
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G + + + L++ C + + +A+ L + +++ S +V + L+ GL K GR+
Sbjct: 245 PLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304
Query: 377 EEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A +FD M + VV S ++ ++ L + A+K + M K G PD+ TY +
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 436 ISGF 439
I G
Sbjct: 365 IYGL 368
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 122/291 (41%), Gaps = 4/291 (1%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+ L R++ TE R+ +V+ LLP +I+ G A F+
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT--MIKSYCKEGDLTTAHRCFRL 208
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ +E + TC ++ + G +++A ++ ++ G + Y + LC+
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKC 268
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
E L + G P + ++ C G+ + L A+ G++ ++
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
++ Y +++ A+ + +EK D TY+ L+ GL D + EEA + + +KE
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +F +++ C ++ A++ ++M+ K D + ++I+ +
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLI 438
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 100/280 (35%), Gaps = 52/280 (18%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++ ++ Y +G D ++ M G P V N L+D I A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
MV PN +T+ L+ + L + G V + SG M+NL+
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSG-----MWNLI-------- 804
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
+ + L M L P +TYSS++ G + + E + ++ M K L P +
Sbjct: 805 ELDITWQLLERMVK-HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
++ K CD K ++A+ ++
Sbjct: 864 ------------------TLLIKCCCDTKF-------------------FEKALSFVSIM 886
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
SE G + Y V LC E E+V L D++E GY
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGY 926
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 197/480 (41%), Gaps = 47/480 (9%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
++ C G + + L ++ + GL EV+ M G P+ + NAL+ A R
Sbjct: 132 VRGC-GCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAG 190
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YN 116
+ A + M DG P+ FT++ + +C+ G + L L+ +GI +V Y
Sbjct: 191 AVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYT 250
Query: 117 LVIDFYSKKG---DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
+++D + G D FD + E + ++P ++Y +++ GA R + ++
Sbjct: 251 MLVDGFCNAGRPEDAVHVFDTMKE----KGVSPNEASYRTLVHGAFRCLGRHKAYVMLTE 306
Query: 174 MVEKKLLPKHF--------LSGNDYVIQKLSDMGKTYAAEMIFKRA-------CDEKIEL 218
+ ++ P H LS N+ + + K + + A C K
Sbjct: 307 WLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLE 366
Query: 219 QDDTCGCMLKALSKEGRV---------------KEAIQIYHLISER---GITVRDSDYYA 260
D CG + + K G K + + H + G+ + Y
Sbjct: 367 LSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNM 426
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ K ++ +++++ E+G +P + + ++ G + +L +++ G
Sbjct: 427 VIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHG 486
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L+ D +SL+ C Q+D A ++ + + TY+VL+ L G + +A+
Sbjct: 487 LIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAI 546
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + MK+ + + SF + C +K++ KA + ML++G PD TY +I
Sbjct: 547 DLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKAL 606
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/444 (19%), Positives = 170/444 (38%), Gaps = 52/444 (11%)
Query: 20 DCYSH---------KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
DC+++ +G+ + L + R M G P V L+D A ++
Sbjct: 210 DCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVF 269
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRS-GKFEVVLGLLD---------SGIYSSVMYNL--- 117
M GVSPN+ ++ + R G+ + + L + + ++Y L
Sbjct: 270 DTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKN 329
Query: 118 -----VIDFYSKKGDFGAAFDR---------------LNEMCN------GRNLTPGFSTY 151
V++ K G D L+++C + PGF Y
Sbjct: 330 EMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVY 389
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++ + + ++ + MV LL ++ + VI G A I K
Sbjct: 390 IMVIKSLLGCKSSSKANHYLKRMVLDGLLSG--VTSYNMVIDCFVKAGAVDKAAEIIKEM 447
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
++ + T ++ SK G V A + ++ E G+ + + +N LC HQ
Sbjct: 448 REKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQL 507
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
++ ++ E G P A + + + C G + +LL+ + G+ D++ ++
Sbjct: 508 DDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAP 567
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE--L 389
+ +C +++DKA + + +L D TY+ L+ L + R++EA I M+
Sbjct: 568 ILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGS 627
Query: 390 KVVSSSSFVIVVSRLCHLKELRKA 413
+ + + +VS L + KA
Sbjct: 628 SATTHHTHLPIVSALTKTGQFSKA 651
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 172/381 (45%), Gaps = 8/381 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS +D + +GL + ++++ MRV G +P +L+D + + A L M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLD-SGIYSS-VMYNLVIDFYSKKGDF 128
V G+ PN T++++ LC+ GK V VL L++ +G+ ++ ++Y +I + +
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D LNEM N + + S Y +++ G + +K + + ++ M + L P +
Sbjct: 426 ERALDLLNEMKN-KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTT 484
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ GK A + + D ++ T ++ L K G + EAI + + E
Sbjct: 485 --IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y ++ CK + L+ ++V++G + + + +G +
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L + +++ GL LD +C + + +C+ + +A + ++ + D Y+ L+
Sbjct: 603 AFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662
Query: 369 GLFKDGRMEEAVRIFDYMKEL 389
K G MEEA + + M+ +
Sbjct: 663 KYQKLGNMEEASSLQNEMESV 683
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 175/438 (39%), Gaps = 54/438 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
++V+D +G ++ ++ M+ G P V N+L+D + E+ L M
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDF 128
+ G + + T++ + + G E VM N+V +D + K+G
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +M R + P TY+S++DG + + + + ++ MV + L+P
Sbjct: 321 REAMKLFAQM-RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV---- 375
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
TY M+ L KEG+V A + L+
Sbjct: 376 ------------TYTV---------------------MVDGLCKEGKVAVADDVLSLMER 402
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL-----SRFVASQCGK 303
G+ + Y ++ E LL ++ +G MEL + C
Sbjct: 403 AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG-----MELDVSLYGTLIWGLCKV 457
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
K E + LL + D GL ++ +++M+ + + +A+AL KI +V TY
Sbjct: 458 QKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTY 517
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
L+DGL K G + EA+ FD M+EL + + + ++ C + L KA+ +EM+
Sbjct: 518 CALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVD 577
Query: 423 MGHKPDEATYKQVISGFM 440
G D+ Y +I G M
Sbjct: 578 KGMSLDKVVYTSLIDGHM 595
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 175/434 (40%), Gaps = 56/434 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+S G + M+ G + V + +DA ++ +R A L+ M G
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ PN+FT++ + C++G+ + + LLD ++
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH--------------------------- 367
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM----------VEKKLLPKHFLSG 187
+ L P TY+ ++DG + K V+D ++ LM + L+ HF++
Sbjct: 368 ----QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNK 423
Query: 188 N-DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
N + + L++M ++ +EL G ++ L K ++ EA + H +
Sbjct: 424 NSERALDLLNEMK-------------NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ G+ Y ++ K + E LL + + G P + + C G
Sbjct: 471 DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSI 530
Query: 307 KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVL 366
E + + GL + ++L++ +C + KA+ L ++ SLD Y L
Sbjct: 531 YEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSL 590
Query: 367 LDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGH 425
+DG K G ++ A + M E + + + +S C++ +++A EM+ G
Sbjct: 591 IDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 650
Query: 426 KPDEATYKQVISGF 439
PD+ Y +I +
Sbjct: 651 TPDKTAYNCLIRKY 664
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 184/471 (39%), Gaps = 79/471 (16%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
R + +L + GL D + +R P CN +L L R + L
Sbjct: 129 RSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVR 188
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
L+ + +PN FT +N+VIDF K+G+
Sbjct: 189 RLFEHLP----APNVFT------------------------------FNIVIDFLCKQGE 214
Query: 128 F---GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A F R+ M +P TY+S++DG + + E + +V M K
Sbjct: 215 LVEARALFVRMKAM----GCSPDVVTYNSLIDGYGKCGELEEVELLVSEM-RKSGCAADV 269
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
++ N +I S G A F + T + A KEG V+EA++++
Sbjct: 270 VTYN-ALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFA 328
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ RG+ + Y + V+ CK + ++ LL ++V +G +P + + V C +G
Sbjct: 329 QMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG 388
Query: 305 KWKEVE-----------------------------------ELLSAVLDKGLLLDSFCCS 329
K + +LL+ + +KG+ LD
Sbjct: 389 KVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYG 448
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+L+ C +++D+A +L K++ + Y ++D FK G+ EAV + + +
Sbjct: 449 TLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDS 508
Query: 390 KVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ ++ LC + +A+ + D+M ++G P+ Y +I GF
Sbjct: 509 GLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 31/413 (7%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ + G VP V +++D + ++ +A + M RDG PN +T++ + L
Sbjct: 333 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 392
Query: 93 CRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
+ K + LL D I + + Y ++ + DF AF RL EM L P
Sbjct: 393 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF-RLFEMMEQNGLKPD 451
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEM 206
Y+ + D + + E +V K + L K + + +I S G T A
Sbjct: 452 EHAYAVLTDALCKAGRAE---EAYSFIVRKGVALTKVYYTT---LIDGFSKAGNTDFAAT 505
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ +R DE T +L AL K+ R+ EA+ I +S RGI Y ++ +
Sbjct: 506 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 565
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+E + + + ++ G+ P A + F+ S C +G+ ++ E+L+ + +G+ D
Sbjct: 566 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 625
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ L++ ID+A + ++ + TY +LL L K
Sbjct: 626 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN------------ 673
Query: 387 KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L V S + S + +L EL + + M+K G P TY +I+GF
Sbjct: 674 --LAYVRS----VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 720
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 174/430 (40%), Gaps = 25/430 (5%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G ++ MM + G + L+ L +R A L+ M RDG SPN
Sbjct: 113 YCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPN 172
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
++ + LC+SG+ L D+ G+ SVM YN +I YSK G A ++
Sbjct: 173 VRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL-KIK 231
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
E+ P TY++++ G +KTE ++ ++ V++ P + +
Sbjct: 232 ELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTP---------TVVTFT 281
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISER 249
++ Y F A K ++ C G ++ +L K+ R+KEA ++ + IS
Sbjct: 282 NLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 341
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y + ++ CK + + +L+ + G P A + + K +
Sbjct: 342 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 401
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
LL+ + G++ + ++L++ C D A L +E+ D Y VL D
Sbjct: 402 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 461
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
L K GR EEA +++ ++ + ++ A + M+ G PD
Sbjct: 462 LCKAGRAEEAYSFI--VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 519
Query: 430 ATYKQVISGF 439
TY ++
Sbjct: 520 YTYSVLLHAL 529
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 191/476 (40%), Gaps = 52/476 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALL----------D 55
+G A + ++ G D ++ M G VP+V NA++ D
Sbjct: 167 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 226
Query: 56 AL---------------YRQNEIRLASC---------LYGAMVRDGVSPNKFTWSLVAQI 91
AL + N + C L V++G +P T++ +
Sbjct: 227 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLING 286
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + KF+ L + + + S +L +I+ KK A + LNE+ + L P
Sbjct: 287 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI-SANGLVP 345
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY+SI+DG + K +++ ++ +M P + + ++ L K + A
Sbjct: 346 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS--LMYGLVKDKKLHKAMA 403
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + + I T +L+ E A +++ ++ + G+ + Y + LC
Sbjct: 404 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 463
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K + EE +V +G + + + G L+ ++D+G DS+
Sbjct: 464 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 520
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S L+ C +++++A+ + ++ + Y +L+D + ++G+ + A R+++ M
Sbjct: 521 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580
Query: 387 KEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM---GHKPDEATYKQVISG 438
S++++ + ++ C L A D +LKM G PD TY +I G
Sbjct: 581 TSSGHKPSATTYTVFINSYCKEGRLEDA---EDLILKMEREGVAPDVVTYNILIDG 633
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 159/396 (40%), Gaps = 71/396 (17%)
Query: 106 DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY---- 161
D + +V YN +I Y K+GD A + G L P T ++++ G R
Sbjct: 62 DGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEG-GLEPETFTCNALVLGYCRTGELR 120
Query: 162 --------------EKTEVSDRIV--GL---------MVEKKLLPKHFLSGN----DYVI 192
++ E S I+ GL +V ++ + S N ++I
Sbjct: 121 KACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLI 180
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L G+ A ++F + T M+ SK GR+ +A++I L+ + G
Sbjct: 181 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 240
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC----------- 301
D Y + LC + + EE LL + V+ G+ P + + + C
Sbjct: 241 PDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 299
Query: 302 ------------------------GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
K + KE +ELL+ + GL+ + +S+++ YC
Sbjct: 300 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 359
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
+ ++D A+ + +E+ + TY+ L+ GL KD ++ +A+ + M++ ++ + +
Sbjct: 360 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 419
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
+ ++ C + A + + M + G KPDE Y
Sbjct: 420 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAY 455
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/410 (19%), Positives = 149/410 (36%), Gaps = 73/410 (17%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S S++L + + L + M + G + A L+D + R+ +
Sbjct: 513 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 572
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVM-YNLVID 120
A +Y M G P+ T+++ C+ G+ E ++L + G+ V+ YN++ID
Sbjct: 573 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
G AF L M G + P + TY LL
Sbjct: 633 GCGHMGYIDRAFSTLKRMV-GASCEPNYWTYC--------------------------LL 665
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEM-----IFKRACDEKIELQDDTCGCMLKALSKEGR 235
KH L GN ++ + G E+ + +R + T ++ K GR
Sbjct: 666 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 725
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
++EA + + +G++ + Y + C E+ + + E G+ P
Sbjct: 726 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 785
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
V C +G +++V+ L +L+ G
Sbjct: 786 LVVGLCNEGDFEKVKSLFCDLLELGY---------------------------------- 811
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRL 404
+ D + +L DGL K G ++ ++ M K +SS ++ +V +++
Sbjct: 812 -NHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 860
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 145/344 (42%), Gaps = 27/344 (7%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
L+D + A+ L M+ +G +P+ +T+S++ LC+ + L +LD
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547
Query: 108 -GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
GI ++ Y ++ID ++G A NEM + + P +TY+ ++ + + E
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH-KPSATTYTVFINSYCKEGRLE 606
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ ++ L +E++ + ++ N +I MG A KR
Sbjct: 607 DAEDLI-LKMEREGVAPDVVTYN-ILIDGCGHMGYIDRAFSTLKR--------------- 649
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
M+ A + + + HL+ VR D N++ + + LL +V+ G
Sbjct: 650 MVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI----ELDITWQLLERMVKHG 705
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P S +A C G+ +E LL + KGL + + L++ C + +KA+
Sbjct: 706 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 765
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
+ + + + +Y +L+ GL +G E+ +F + EL
Sbjct: 766 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLEL 809
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
DM + A +R ++ L L++L++ + ++Y + + G+
Sbjct: 10 DMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV 69
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + CKE R ++E G P + V C G+ ++ L +
Sbjct: 70 TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 129
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
G + + + L++ C + + KA+ L + +++ S +V + L+ GL K GR+
Sbjct: 130 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 189
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+A +FD M + VV S ++ ++ L + A+K + M K G PD+ TY +
Sbjct: 190 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 249
Query: 436 ISGF 439
I G
Sbjct: 250 IYGL 253
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 121/291 (41%), Gaps = 4/291 (1%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+ L R++ TE R+ +V+ LLP +I+ G A F+
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT--MIKSYCKEGDLTTAHRYFRL 93
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ +E + TC ++ + G +++A ++ ++ G + Y + LC
Sbjct: 94 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 153
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ L + G P + ++ C G+ + L A+ G++ ++
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 213
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
++ Y +++ A+ + +EK D TY+ L+ GL D + EEA + + +KE
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 272
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ +F +++ C ++ A++ ++M+ K D + ++I+ +
Sbjct: 273 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLI 323
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 181/436 (41%), Gaps = 10/436 (2%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
RD + +LD + + + VY MR G P V N L+ AL + + + A
Sbjct: 65 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 124
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
+ M R G P++ + + +C+ G+ E G L + YN V+ +
Sbjct: 125 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFR 184
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
F +NEM R L P TY++I+D + + ++ I+ MV P + L+
Sbjct: 185 MWEVFSVVNEMVQ-RGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTP-NVLTF 242
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
V D GK + A ++ DE + +++ L G +K A+ ++ +
Sbjct: 243 TALVKGFFED-GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 301
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ + Y V+ + + ++ G P + + + C K +
Sbjct: 302 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 361
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ E L+ +L ++ ++L+ C ++ +A+ + + + + TY+ LL
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421
Query: 368 DGLFKDGRMEEA----VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
GLF++G ++A + + + EL +V+ ++ V++ LC + + AM M+
Sbjct: 422 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT---VINCLCQMCMRKHAMLLLGRMMVQ 478
Query: 424 GHKPDEATYKQVISGF 439
G +PD T+ +I +
Sbjct: 479 GIQPDAFTFNAIIHAY 494
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 153/364 (42%), Gaps = 25/364 (6%)
Query: 35 YRMMRVY---------GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
+RM V+ G P V ++DA + E+R+A + MV G +PN T+
Sbjct: 183 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 242
Query: 86 SLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + GK L + +D G S++ YN++I GD A D N M
Sbjct: 243 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM-- 300
Query: 141 GRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--DYVIQKLS- 196
RN L P +TYS+++DG + + I M P + N D + +K+
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 360
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
D ++ +M+ + T ++ L GRV A+ ++H + G D
Sbjct: 361 DQAESLIDKMLMDNCPPNTV-----TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDR 415
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ L +E ++ ++ +++ G+ + + + C K LL +
Sbjct: 416 TYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM 475
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ +G+ D+F ++++ YC ++ A L ++ + +V Y +L+ L G++
Sbjct: 476 MVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKL 535
Query: 377 EEAV 380
A+
Sbjct: 536 SNAM 539
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 182/444 (40%), Gaps = 22/444 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D V+ Y G L+ + M+ + P V N +LDAL +N ++
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGI-YSSVMYNLVID 120
+ +Y M +DG+ PN FT++++ + LC++ G ++++ + G V Y +I
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A + + TP Y+++++G + E + +++ M+ K +
Sbjct: 225 SLCKLGKVKEAREL------AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMI----FKRACDEKIELQDDTCGCMLKALSKEGRV 236
P + +I LSD G + + F R C + T ++K +G
Sbjct: 279 PN--VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH----TFTSLIKGFFLKGGS 332
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA+ + + G+ Y A ++ LC + + + + G P S
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G E+ + ++ G + + +++ C N ++A L ++
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC 452
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMK 415
+ T++ + GL GR++ A+++FD M +++++ ++ L + +A
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+M G + + TY +I G+
Sbjct: 513 LVKDMEHRGIELNLVTYNTIIYGY 536
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 10/359 (2%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW-S 86
F + ++ M G P V + +++AL + L+ + M G SPN T+ S
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321
Query: 87 LVAQILCRSGKFEVVL---GLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM-CNG 141
L+ + G E + ++ G+ +V+ YN ++ K G A N+M NG
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P TYS+++DG + + + + M+ P + ++ L
Sbjct: 382 --CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN--VVAYTCMVDVLCRNSMF 437
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A + + E T +K L GRV AI+++ + G + Y
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ L K+ + E GL++D+ RG + + + C G E ELL ++ +G
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D+ + +++ YC +++ AI L ++ K D+ Y L+ G+ +EEA+
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAI 616
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/259 (16%), Positives = 110/259 (42%), Gaps = 6/259 (2%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
KH +I+KL+ + + + ++ E I +D ++ + + G ++A++
Sbjct: 73 KHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + + + Y ++ L E++ + + + ++ + G P + + + C
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ +LL + KG D ++L+ C ++ +A L + + V
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVP 247
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ L++G+ K+ EEA ++ D M + + S+ +++ L + ++ +M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 421 LKMGHKPDEATYKQVISGF 439
G P+ T+ +I GF
Sbjct: 308 FARGCSPNLHTFTSLIKGF 326
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 174/413 (42%), Gaps = 18/413 (4%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
R M G +P+ N ++ L R + A L +V GV P+ FT+ + LC+
Sbjct: 350 RQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKH 408
Query: 96 GKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
K + L D +G+ S V Y+ ++ Y +KG A +EM + + P T
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPD-KGFPPNEVT 467
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY----VIQKLSDMGKTYAAEM 206
Y++++ G Y K + D L+ E + ++ +S DY +I L + + +
Sbjct: 468 YTTLMKG---YIKKKAFDNAYALLNEMR---QNGVSCGDYTYNILINGLYMVNRVCEVDE 521
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ KR E T ++ K G + A +Y + ++GIT Y +F++ C
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ + + LL V G P + F+ + C +G L +L GL D
Sbjct: 582 RTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVT 641
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+S + Y + + + +A + + K + D Y L+DG K G + A+ ++ M
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
V+ +F + LC ++ A + D+M ++ P+ TY +I+
Sbjct: 702 MANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINA 754
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 174/424 (41%), Gaps = 52/424 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ D + ++ M G P + L + + A + G M G P + T+
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMC 139
S V +L + + + L L D + ++ V+ +++ Y G+ G A D +E+
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ +TP TY ++ G T+ + ++ M+E+ LLP
Sbjct: 319 SD-GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPS----------------- 360
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
TY ++ +K L ++ R K+AI + L+ + G+ D +
Sbjct: 361 -TYEFNLV-------------------IKGLLRDKRWKDAIGLLKLVVDTGV----PDVF 396
Query: 260 AF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
+ ++ LCK + E L + E G P + + C KG+ E +L S +
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
DKG + ++LM+ Y + D A AL ++ + S TY++L++GL+ R+
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV 516
Query: 377 EEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
E + ++ E V ++ ++ +++ + A + +M K G P+ TY
Sbjct: 517 CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576
Query: 436 ISGF 439
I G+
Sbjct: 577 IDGY 580
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 153/387 (39%), Gaps = 43/387 (11%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y KG + L++Y M GF P L+ ++ A L M ++GVS
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+T++++ L + E++ L G + M YN +I+ + K G G+AF
Sbjct: 500 DYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYR 559
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+M + +TP TY+S +DG Y +T D V L++ YV +
Sbjct: 560 QM-RKKGITPNIVTYTSFIDG---YCRTNCCDLAVKLLI--------------YVRR--- 598
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+ I+ + K+G + A+ L+ + G+T +
Sbjct: 599 -----------------DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVT 641
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y +FV E ++++ + + + G EL S +
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ ++ D ++L C + ID A L + +L S ++ TY++L++ +DG++
Sbjct: 702 MANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKL 761
Query: 377 EEAVRIFDYMKELKVVSSSSFVIVVSR 403
+EA ++ D M VV + ++ R
Sbjct: 762 QEAFQLHDEMLSSGVVPDDTTYDILPR 788
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 142/372 (38%), Gaps = 43/372 (11%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVMYNLVIDFYSKKGDF 128
M+ G+ P+ + ++LV + L R +++ +GLL D+G+ Y +I + K
Sbjct: 352 MIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKL 411
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + ++M + P TY S+L G
Sbjct: 412 HEAVNLWDKMKEA-GVKPSIVTYHSLLLG------------------------------- 439
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ G+ A ++ D+ + T ++K K+ A + + + +
Sbjct: 440 ------YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G++ D Y +N L ++ EV +L+ + G++P M + + G
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+ + KG+ + +S ++ YC D A+ L I + + D+A Y+ +D
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613
Query: 369 GLFKDGRMEEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
K G M A+ +K+ + + V+ +LK + +A K + M+K
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673
Query: 428 DEATYKQVISGF 439
D Y +I GF
Sbjct: 674 DTEIYTTLIDGF 685
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 12/248 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ + G+ +YR MR G P + + +D R N LA L + RDG
Sbjct: 541 IINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ P+ ++ C+ G L LL G+ V +YN + Y A
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP--KHFLSGNDY 190
M R + Y++++DG + + + M+ ++P K F +
Sbjct: 661 KFYYSMIKQR-VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA---- 715
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ L G A+ + + T ++ A ++G+++EA Q++ + G
Sbjct: 716 LTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSG 775
Query: 251 ITVRDSDY 258
+ D+ Y
Sbjct: 776 VVPDDTTY 783
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNH 417
D YDV++ + G +AVR+FD M V + I +S LC L++ +A++
Sbjct: 184 DAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVL 243
Query: 418 DEMLKMGHKPDEATYKQVI 436
+M + G +P E TY V+
Sbjct: 244 GKMREAGFEPWELTYSSVV 262
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ ++ + ++D +S G LE+Y M +P AL L R +I A L
Sbjct: 673 ADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRL 732
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM 114
M R VSPN T++++ R GK + L D + S V+
Sbjct: 733 LDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVV 777
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 159/371 (42%), Gaps = 44/371 (11%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG-VSPN 81
+H F +Y +M+ +GF P V +CNA L +L R +A Y + R VSPN
Sbjct: 165 AHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPN 224
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLN 136
+T +++ + C G+ F+++ ++D G+ +V+ +N +I Y KG FG A ++
Sbjct: 225 VYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLAL-KVK 283
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
+ + P T++++++G + K ++R+ M K++
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEM-------------------KVA 324
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
++ + T +L + G + +++Y + G+
Sbjct: 325 NVDPSVV------------------TYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADIL 366
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A + LCK+ + ++ G +R++ + +P A S + QC + + + ++
Sbjct: 367 TYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSM 426
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ G + L+ +C N D A+ + + S D++T L DGL + G+
Sbjct: 427 VRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKN 486
Query: 377 EEAVRIFDYMK 387
+ A+ + M+
Sbjct: 487 QLALALCSEME 497
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/334 (18%), Positives = 126/334 (37%), Gaps = 81/334 (24%)
Query: 182 KHFLSGNDYVIQKLSDMGK--TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+ F + ++ Q LS + A + R C+ L D+ + K L+ + + A
Sbjct: 117 RQFKTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSPLVFDS---LFKTLAHTNKFRHA 173
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER--------------- 284
IY L+ E G + AF++ L + + + R++ R
Sbjct: 174 THIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIR 233
Query: 285 ---------------------GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
G P + + ++ C KG + ++ S +++ G+
Sbjct: 234 AYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQP 293
Query: 324 DSFCCSSLMEYYCSNRQI---------------------------------DKAIALHIK 350
+ ++L+ +C R++ D + + +
Sbjct: 294 NVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVY 353
Query: 351 IEKLKGSL--DVATYDVLLDGLFKDGRMEEA---VRIFDYMKELKVVSSSSFVIVVSRLC 405
E ++ L D+ TY+ L+ GL KDG+ ++A VR D KE V ++S+F +++ C
Sbjct: 354 EEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELD--KENLVPNASTFSALITGQC 411
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+A + M++ G P+ T++ +IS F
Sbjct: 412 VRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAF 445
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 113/313 (36%), Gaps = 33/313 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L++++ Y G G ++ M G P V + N L+ + LA + M
Sbjct: 227 TLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLM 286
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
V +GV PN V +N +I+ + K+ A
Sbjct: 287 VENGVQPN------------------------------VVTFNTLINGFCKERKLHEANR 316
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
NEM N+ P TY+++L+G + +E+ R+ M+ L L+ N ++
Sbjct: 317 VFNEM-KVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNG-LKADILTYNALILG 374
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
D GKT A + E + T ++ + A IY + G +
Sbjct: 375 LCKD-GKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSP 433
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
+ ++ CK + +LRD++ R P +S C GK + L
Sbjct: 434 NGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALC 493
Query: 314 SAVLDKGLLLDSF 326
S + + LL D F
Sbjct: 494 SEMEVRRLLPDGF 506
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 184/423 (43%), Gaps = 34/423 (8%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E R++ G P V A NA++ ++ A L M V P+ +T++ + + L
Sbjct: 114 EARRVLAACG--PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGL 168
Query: 93 CRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C G+ L +LD + V Y ++++ K+ + A L+EM + TP
Sbjct: 169 CGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPD 227
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN----DYVIQKLSDMGKTYA 203
TY+ +++G ++ V D I L K LP + N + V++ L +
Sbjct: 228 IVTYNVVVNGI--CQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWED 281
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
AE + + T ++ L ++G V+ A+++ I + G T Y ++
Sbjct: 282 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH 341
Query: 264 VLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLL 323
CK+ + ++ L +V RG P + + + + C G+ ELL + DKG
Sbjct: 342 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG--- 398
Query: 324 DSFCCSSLMEYYCSNRQIDKA----IALHIKIEKLKGSL--DVATYDVLLDGLFKDGRME 377
C L+ Y + KA AL + E + L D+ TY + GL ++ R+E
Sbjct: 399 ---CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455
Query: 378 EAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+A+R F ++++ + ++ + ++ LC +E A+ M+ G P+E+TY +I
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515
Query: 437 SGF 439
G
Sbjct: 516 EGL 518
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 9/238 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
KGL LEV + YG P + N LL A +Q ++ A MV G P+
Sbjct: 310 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 369
Query: 84 TWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM 138
+++ + LCRSG+ +V + LL D G ++ YN VID +K G A + LNEM
Sbjct: 370 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ + L P TYS+I G R ++ E + R G + + + P L + +I L
Sbjct: 430 VS-KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY--NAIILGLCKR 486
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+T++A +F + T +++ L+ EG +KEA + + RG+ VR S
Sbjct: 487 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV-VRKS 543
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 171/394 (43%), Gaps = 25/394 (6%)
Query: 54 LDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV 113
L +L R+ E+ A L G+ R P+ T + + + L SG+ +L + +
Sbjct: 72 LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 127
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN ++ Y G AA + EM + P TY++++ G +T + ++
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEM----PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 183
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-------GCM 226
M+ ++ +P D V + + + +K+A E++D C +
Sbjct: 184 MLRRRCVP-------DVVTYTI--LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 234
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ + +EGRV +AI+ + G Y + LC + E+ L+ ++ ++G
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P + + ++ C KG + E+L + G +S + L+ +C +++DKA+A
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
+ D+ +Y+ LL L + G ++ AV + +K+ S+ V+ L
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 414
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++A++ +EM+ G +PD TY + +G
Sbjct: 415 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 8/316 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V++ +G D +E + + YG P + N +L L A L G M +
Sbjct: 232 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 291
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G PN T++++ LCR G E L +L+ +S+ YN ++ + K+
Sbjct: 292 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 351
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L+ M + R P +Y+++L R + +V+ ++ + +K P L +
Sbjct: 352 AMAFLDLMVS-RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP--VLISYNT 408
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI L+ GKT A + + ++ T + L +E R+++AI+ + + + G
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y A + LCK + L ++ G +P + + +G KE
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528
Query: 311 ELLSAVLDKGLLLDSF 326
+LL + +G++ S
Sbjct: 529 DLLDELCSRGVVRKSL 544
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 164/384 (42%), Gaps = 17/384 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--- 107
N L+ L + A + M+R P+ T++++ + C+ ++ + LLD
Sbjct: 162 NTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 221
Query: 108 -GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
G V YN+V++ ++G A + L + P +Y+ +L G E+ E
Sbjct: 222 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL-PSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQDD 221
++ ++G M +K P + ++ N +I L G A E I K C +
Sbjct: 281 DAEELMGEMGQKGC-PPNVVTFN-MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
+L A K+ ++ +A+ L+ RG Y + LC+ + + LL +
Sbjct: 339 ----LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
++G P + + + GK KE ELL+ ++ KGL D S++ C +I
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIV 400
+ AI K++ + + Y+ ++ GL K A+ +F YM + + S++ I+
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514
Query: 401 VSRLCHLKELRKAMKNHDEMLKMG 424
+ L + +++A DE+ G
Sbjct: 515 IEGLAYEGLIKEARDLLDELCSRG 538
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 160/385 (41%), Gaps = 43/385 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+++L+ + + +++ MR G P + N +++ + ++ + A +
Sbjct: 197 TILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS 256
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGA 130
G PN ++++V + LC + ++E L+ G +V+ +N++I F +KG
Sbjct: 257 YGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP 316
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L ++ TP +Y+ +L + +K + + + LMV + P +S N
Sbjct: 317 ALEVLEQIPK-YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNT- 373
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+L AL + G V A+++ H + ++G
Sbjct: 374 -----------------------------------LLTALCRSGEVDVAVELLHQLKDKG 398
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
Y ++ L K + +E LL ++V +G P + S A C + + ++
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
V D G+ ++ ++++ C R+ AI L + + +TY +L++GL
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS 395
+G ++EA + D + VV S
Sbjct: 519 AYEGLIKEARDLLDELCSRGVVRKS 543
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 189/444 (42%), Gaps = 17/444 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + S +++ G + ++ R M ++G +P C + AL
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L+ M G PN +T++ + LC SG +V +GL D ++V YN +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Query: 121 FYSKKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ AF LN M GRN +P TY+ ++ G + D ++V +
Sbjct: 399 ILVENRRIKYAFVVLNLM--GRNGCSPNIVTYNEMIKG-----YCILGDPKKAMLVMNNM 451
Query: 180 LPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L + L + +I+ D G T +A I D + + + ++ K ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ A +++ + + G+ + Y A ++ CK+ + + LL + G P +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ + + EEL ++++G+ + +++++ C N A+ + K+ +
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
++ TY L+ L ++G++EEA +F ++ ++ ++V ++ ++ A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
M+K G +P TY +I G
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 180/447 (40%), Gaps = 65/447 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I+SC +++ + +S LD S GL M GL Y + ++ + + A++D +R
Sbjct: 151 LIKSCHSKEAMARTMSF-LDMLSQSGLRM-GLFAYSALLIH--LSRLGMTAAVMDRYHR- 205
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM------ 114
M+ +GV PN ++ V LC+ G ++ ++ S M
Sbjct: 206 ------------MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK-VFESEMSPDTFT 252
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +I + +K D +A N+M P TYS++++G + + ++ M
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 175 VEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ +LP H +G I L DMG A +F ++ E T ++ L
Sbjct: 312 ILHGILPTAHTCTGP---IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 368
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G +K AI ++H +S G+ Y A +N+L + + + +L + G P +
Sbjct: 369 GLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C G K+ +++ +L +G
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRG--------------------------------- 455
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
S ++ TY+ ++ G G A+RI D M++ S+ ++ C + ++
Sbjct: 456 --HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A +EM+ G P+E TY +I G+
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGY 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 173/452 (38%), Gaps = 66/452 (14%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ Y G L + +MR G P + L+ + +++ A L+ MV DG
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ PN+ T++ + C+ K + LL+ SG +V YN++I +K+ +F A
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA- 584
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L ++ + P TY++++DG + T ++ + M+E+ LP L +I
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN--LLTYSSLI 642
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ L GK AE +F + + T M++A G+V+ A + + G
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 253 VRDSDYYAFVNVLCKEHQ-PEEVCGLLRDVVER---GYIPCAMEL--------------- 293
Y + L E+ ++ L DVV GY +
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762
Query: 294 -----SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ V++ G+W E ELL +++ +GL D +SL+ R +D A+
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM--- 819
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK 408
G+FK + + KEL + LC L
Sbjct: 820 --------------------GVFKHMSTQGCEVHLNGYKEL-----------ICALCQLH 848
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++A + ML PD+ +I G +
Sbjct: 849 RRKEARITFENMLMRTWNPDDVVQAVLIDGLL 880
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 161/390 (41%), Gaps = 21/390 (5%)
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 118
R++++ A ++ M ++G PN T+S + LC SG+ L I +++ ++
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL----IREMILHGIL 317
Query: 119 IDFYSKKGDFGAAFD--------RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++ G A D RL + P TY++++ G +V+ +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA---AEMIFKRACDEKIELQDDTCGCML 227
M + P + ++ N + + + YA ++ + C I ++ M+
Sbjct: 378 FHRMSRDGVFP-NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE----MI 432
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
K G K+A+ + + + +RG + Y + C +L + + G
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + C K + L + ++D GL + ++L++ YC + ++D A +L
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
+++ +V TY+VL+ GL K A + M E + + ++ ++ LC
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A++ ++M++ G P+ TY +I
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 182/444 (40%), Gaps = 22/444 (4%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG D V+ Y G L+ + M+ + P V N +LDAL +N ++
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRS----GKFEVVLGLLDSGI-YSSVMYNLVID 120
+ +Y M +DG+ PN FT++++ + LC++ G ++++ + G V Y +I
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G A + + TP Y+++++G + E + +++ M+ K +
Sbjct: 225 SLCKLGKVKEAREL------AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMI----FKRACDEKIELQDDTCGCMLKALSKEGRV 236
P + +I LSD G + + F R C + T ++K +G
Sbjct: 279 PN--VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH----TFTSLIKGFFLKGGS 332
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA+ + + G+ Y A ++ LC + + + + G P S
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ G E+ + ++ G + + +++ C N ++A L ++
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC 452
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMK 415
+ T++ + GL GR++ A+++FD M +++++ ++ L + +A
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
+M G + + TY +I G+
Sbjct: 513 LVKDMEHRGIELNLVTYNTIIYGY 536
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 10/359 (2%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW-S 86
F + ++ M G P V + +++AL + L+ + M G SPN T+ S
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321
Query: 87 LVAQILCRSGKFEVVL---GLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM-CNG 141
L+ + G E + ++ G+ +V+ YN ++ K G A N+M NG
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P TYS+++DG + + + + M+ P + ++ L
Sbjct: 382 --CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPN--VVAYTCMVDVLCRNSMF 437
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A + + E T +K L GRV AI+++ + G + Y
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ L K+ + E GL++D+ RG + + + C G E ELL ++ +G
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
D+ + +++ YC +++ AI L ++ K D+ Y L+ G+ +EEA+
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAI 616
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/259 (16%), Positives = 110/259 (42%), Gaps = 6/259 (2%)
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
KH +I+KL+ + + + ++ E I +D ++ + + G ++A++
Sbjct: 73 KHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + + + Y ++ L E++ + + + ++ + G P + + + C
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
+ +LL + KG D ++L+ C ++ +A L + + V
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVP 247
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ L++G+ K+ EEA ++ D M + + S+ +++ L + ++ +M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 421 LKMGHKPDEATYKQVISGF 439
G P+ T+ +I GF
Sbjct: 308 FARGCSPNLHTFTSLIKGF 326
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 196/447 (43%), Gaps = 13/447 (2%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ S G + L++V++ H L G V M G P+V L++ L +
Sbjct: 101 MHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKG 160
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYN 116
++ A L + + G + T+ ++ LC+ GK +G L + + V+Y+
Sbjct: 161 DVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYS 220
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
V+D K G A EM +G+ + P TY+ ++ G + + + + ++ M++
Sbjct: 221 TVMDGLCKDGLVSEALGLCLEM-SGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI--FKRACDEKIELQDDTCGCMLKALSKEG 234
++P L + ++ L GK A+ + F E ++ T ++ +
Sbjct: 280 MGVMPD--LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVF--TYNSLIDRYCLQN 335
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
++ EA +++ L+ RG Y + ++ CK + LL ++++ G+ P + +
Sbjct: 336 QMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWT 395
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ C G+ +EL + G + + C+ +++ C ++ + +A++L +EK
Sbjct: 396 TLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKA 413
L++ Y ++LDG+ G++ A+ +F + + ++ ++ I+++ L KA
Sbjct: 456 NLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKA 515
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGFM 440
M + G PD TY + G +
Sbjct: 516 EDLLSNMEENGCMPDSCTYNVFVQGLV 542
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 144/378 (38%), Gaps = 43/378 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D GL + L + M G P + L+ L + A L M++
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279
Query: 76 DGVSPNKFTWSLVAQILCRSGKF---EVVLG--LLDSGIYSSVMYNLVIDFYSKKGDFGA 130
GV P+ + +++ +LC+ GK + V+G +L + YN +ID Y +
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A R+ E+ R P Y+S++ G + + + ++ M++ P +
Sbjct: 340 A-TRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD--VVTWTT 396
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I +G+ AA+ +F TC +L L K + EA+ ++H + +
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + Y S + C GK
Sbjct: 457 LDLNIVIY-----------------------------------SIILDGMCSAGKLNTAL 481
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
EL S + KGL ++ + + ++ + +DKA L +E+ D TY+V + GL
Sbjct: 482 ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541
Query: 371 FKDGRMEEAVRIFDYMKE 388
+ + +++ M++
Sbjct: 542 VAEREIARSIKYLTMMRD 559
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 129/331 (38%), Gaps = 43/331 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+L++++D +G M V M + G VP V N+L+D QN++ A+ ++ M
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDF 128
V G P+ ++ + C+ + LLD I V + +I + + G
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AA + M + P T + ILDG + + +LL +
Sbjct: 408 LAAKELFLNM-HKYGQVPNLQTCAIILDG----------------LCKSQLLSE------ 444
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
A +F ++L +L + G++ A++++ +
Sbjct: 445 ---------------ALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPA 489
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G+ + Y +N K+ ++ LL ++ E G +P + + FV + +
Sbjct: 490 KGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIAR 549
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
+ L+ + DKG +D+ ++ Y +N+
Sbjct: 550 SIKYLTMMRDKGFSVDATTTEMIINYLSTNQ 580
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 178/372 (47%), Gaps = 14/372 (3%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ ++ Y G + L ++ + G V + NALL+AL + RLA ++ +
Sbjct: 122 LTTLIRAYGLAGKPLSALRIFLKFQPLG----VRSLNALLNALVQNKRHRLAHSVFKSST 177
Query: 75 RD-GVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDF 128
+ PN + +++ + LC+ + +V + +LD G+ +V+ Y+ V+ + KGD
Sbjct: 178 EKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDM 237
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
+A E+ + + P ++Y+ ++ G R K + R++ LM E ++ P G
Sbjct: 238 ESAMRVFGEILD-KGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYG- 295
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+I+ K A + + ++ + C ++ L +EG V+ A +++ +
Sbjct: 296 -VMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVR 354
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G V + V+ LCKE + E G+L D +E+G + M + +A C +G+ E
Sbjct: 355 KGWRVGGAVVSTIVHWLCKEGKVVEARGVL-DELEKGEVASLMTYNTLIAGMCERGQLCE 413
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L +++KG + ++F + LM+ +C + +AI + ++ + + +T+ +L+D
Sbjct: 414 AGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVD 473
Query: 369 GLFKDGRMEEAV 380
G+ G +E +
Sbjct: 474 GISLSGGKKEEI 485
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
EK + +V + ++LL L K ++ AVR+ D M + +V + S+ V+ ++
Sbjct: 178 EKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDM 237
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
AM+ E+L G PD +Y ++SGF
Sbjct: 238 ESAMRVFGEILDKGWMPDVTSYTVLMSGF 266
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 188/445 (42%), Gaps = 76/445 (17%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L++ M + G +P V N ++ L R N I + L M+ G +PN T+ ++
Sbjct: 261 EALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLM 320
Query: 90 QILCRSGKFE-------------------VVLGLLDSG--------IYSSVM-------- 114
LCR GK + ++ G + SG +Y ++
Sbjct: 321 NGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDV 380
Query: 115 --YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVG 172
+N +I KKG G+A D +N+M + TP TY+++LDG + + E +
Sbjct: 381 FTFNTLIHGLCKKGLMGSAVDMVNDM-SANGCTPNLITYTTLLDGFCKKNQLEEA----- 434
Query: 173 LMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
YV+ ++S G EL +L+AL K
Sbjct: 435 ----------------GYVLNEMSAKG----------------FELNIMGYNVLLRALCK 462
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G+V +A+ + +S++G + + LCK + E+ L RD++ G I +
Sbjct: 463 NGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + + G +E +L++ +L +G LD + L++ +C +KA+ L ++
Sbjct: 523 YNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582
Query: 353 KLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELR 411
+ + ++L++GL + G++ A+ + D + ++ +++ LC + +R
Sbjct: 583 RKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIR 642
Query: 412 KAMKNHDEMLKMGHKPDEATYKQVI 436
+A +++ G +PD TY +I
Sbjct: 643 EAFNLFNKLQAEGIQPDAITYNTLI 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 178/410 (43%), Gaps = 14/410 (3%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M VY P + N +LD L N +A+ ++ M+ GV P +T+ +V + LC
Sbjct: 163 MKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVN 222
Query: 97 KFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ + LL + +SV+Y +I SK+ A L EM L P T+
Sbjct: 223 EVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCL-PDVDTF 281
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
+ ++ G R + ++V M+ + P G ++ L +GK A+++ +
Sbjct: 282 NDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYG--VLMNGLCRVGKVDEAQVLLNKV 339
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQ-IYHLISERGITVRDSDYYAFVNVLCKEHQ 270
D ++ K GR+ EA +Y + + G + ++ LCK+
Sbjct: 340 PTP----NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGL 395
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
++ D+ G P + + + C K + +E +L+ + KG L+ +
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNV 455
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF-DYMKEL 389
L+ C N ++ KA+ + ++ D+ T++ L+ GL K R E+A+ ++ D + +
Sbjct: 456 LLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDG 515
Query: 390 KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ ++ +++A+K ++ML G DE TY +I F
Sbjct: 516 VIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAF 565
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 185/455 (40%), Gaps = 61/455 (13%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ M G +P V ++ AL NE+ A L M + G PN + + L
Sbjct: 194 NVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHAL 253
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG---------RN 143
+ + L LL+ + + +D ++ D RLN + G R
Sbjct: 254 SKRDRVNEALKLLEEMFLMGCLPD--VDTFN---DVIYGLCRLNRIHEGAKLVDRMLFRG 308
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--HF-LSGNDYVIQKLSDMGK 200
TP TY +++G R K + + +++ K P HF + N YV D
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQ----VLLNKVPTPNDVHFTILINGYVKSGRLDEAN 364
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ + + K C + T ++ L K+G + A+ + + +S G T Y
Sbjct: 365 AFLYDKMIKNGCRPDVF----TFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTT 420
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ CK++Q EE +L ++ +G+ M + + + C GK + ++L + DKG
Sbjct: 421 LLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKI--------------------------EKL 354
D F ++L+ C + + A+AL+ + E L
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEAL 540
Query: 355 K---------GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
K LD TY+ L+ K G E+A+ +FD M +V S+ S ++++ L
Sbjct: 541 KLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGL 600
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + ++ A++ +M+ G PD TY +I+G
Sbjct: 601 CRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGL 635
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 154/362 (42%), Gaps = 28/362 (7%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y M G P V N L+ L ++ + A + M +G +PN T++ + C
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426
Query: 94 RSGKFE----VVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
+ + E V+ + G ++M YN+++ K G A D L EM + + P
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSD-KGCKPDI 485
Query: 149 STYSSILDGARRYEKTE---------VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
T+++++ G + ++ E + D ++ V L FL G IQ+ +
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG--AIQEALKL- 542
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+M+F R C L + T ++KA K G ++A+ ++ + + + +
Sbjct: 543 ---VNDMLF-RGC----PLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCN 594
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N LC+ + LLRD++ RG P + + + C G +E L + + +
Sbjct: 595 LLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAE 654
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIK-IEKLKGSLDVATYDVLLDGLFKDGRMEE 378
G+ D+ ++L+ ++C D A L ++ +E DV Y +L+ K+ E
Sbjct: 655 GIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWY-ILVSNFIKEIGKEN 713
Query: 379 AV 380
+
Sbjct: 714 GI 715
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 8/278 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +LD + K + V M GF + N LL AL + ++ A + G M
Sbjct: 419 TTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSD 478
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLG-----LLDSGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ FT++ + LC+ + E L LLD I ++V YN +I + + G
Sbjct: 479 KGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQE 538
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +N+M R TY+ ++ + TE + + MV K L+P + +S N
Sbjct: 539 ALKLVNDML-FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN-ISCN-L 595
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L +GK A + + + T ++ L K G ++EA +++ + G
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
I Y + C+ ++ LL VE +IP
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIP 693
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+++ G + LE+ R M G P V N+L++ L + IR A L+ +
Sbjct: 594 NLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQA 653
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN------LVIDFYSKKG--- 126
+G+ P+ T++ + CR+G F+ LL G+ ++ + N LV +F + G
Sbjct: 654 EGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKEN 713
Query: 127 --DFGAA 131
FG A
Sbjct: 714 GISFGTA 720
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 194/462 (41%), Gaps = 54/462 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + GL + MR G V ALL A + ++ AS ++ M+
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
G PN T+S + LC++G+ + + I +S N+ DFY + G D
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTS--DNVGSDFYFE----GKHTD-- 438
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
++ P TY +++DG + K + ++ M+ P H + D +I
Sbjct: 439 -------SIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY--DALIDGF 489
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+GK A+ +F R T ++ A+ K+ R+ A+++ + E T
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNV 549
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y A ++ LC+ + ++ LL + E+G P + + + GK +L
Sbjct: 550 VTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQ 609
Query: 316 VLDKGL--------LLDSFCCSS--------------------LMEYYCSNRQ--IDKAI 345
+ KG +L + CC++ ++ YCS Q K I
Sbjct: 610 MSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFI 669
Query: 346 ALHIKIEKLK--GSLDVA-TYDVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFV 398
A +E+L+ G++ +A Y +L+D K GR+EEA+ + M E L + S +
Sbjct: 670 ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYT 729
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ LC +L KA + + E+ + G P+ + + +I G +
Sbjct: 730 SLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLI 771
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 176/415 (42%), Gaps = 55/415 (13%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
++ +G+ P+ + NAL+ L ++ + + M G +KFT AQ LC+ G+
Sbjct: 31 LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90
Query: 98 FEVVLGLLDSGIYS--SVMYNLVIDFYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSI 154
+ L +++ + +V+ +I + F A L+ M CN + P TY ++
Sbjct: 91 WSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCN--SCIPNVVTYRTL 148
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
L G + ++ RI+ +M+++ P L N V + YA +++ KR D
Sbjct: 149 LTGFLKKKQLGWCKRIINMMMKEGCNPNPSLF-NSLVHSYCNARDYPYAYKLL-KRMAD- 205
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC--KEHQPE 272
CGC G V Y F+ +C +E
Sbjct: 206 --------CGC------PPGYVA--------------------YNIFIGSICGGEELPSP 231
Query: 273 EVCGLLRDVVER----GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
++ L V E + + + F CG GK+ +++ ++ KG + D+
Sbjct: 232 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTY 291
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
S ++ + C +++KA L +++ + + DV TY +L+D K G +E+A FD E
Sbjct: 292 SKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFD---E 348
Query: 389 LKVVSSSSFVIVVSRLCH----LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + S+ V+ + L H K+L +A + M+ G P+ TY ++ G
Sbjct: 349 MRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 146/331 (44%), Gaps = 24/331 (7%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
CE DAL +D + G + EV+ M G++P V +L+DA+++
Sbjct: 473 NGCEPNHIIYDAL---IDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNL 117
+ LA + MV +PN T++ + LCR G+ + L LL + G +V+ Y
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTA 589
Query: 118 VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK 177
+ID K G + +M + + P + TY +++ + + ++ M ++
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQM-STKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-KQ 647
Query: 178 KLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
PK +L G V+Q S K A+ + + G ++ SK GR++
Sbjct: 648 TYWPK-YLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLE 704
Query: 238 EAIQIY----HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
EA++++ L S IT +D Y + + LC Q E+ L ++ +G +P EL
Sbjct: 705 EALELHKEMMELSSSLNITSKDM-YTSLIQALCLASQLEKAFELYSEITRKGVVP---EL 760
Query: 294 SRFVASQCG---KGKWKEVEELLSAVLDKGL 321
S FV G KW E +L ++ D+G+
Sbjct: 761 SVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 95/223 (42%), Gaps = 9/223 (4%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L K+ ++ +I +++ + G S + + V+ C LL+ + + G
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207
Query: 286 YIPCAMELSRFVASQCGKGKWKE------VEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
P + + F+ S CG + E++ +L +L+ ++ C
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267
Query: 340 QIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SF 397
+ D A + IK+ KG + D +TY ++ L + ++E+A +F MK + V ++
Sbjct: 268 KFDMAFQI-IKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
I++ C + +A DEM +G + TY ++ ++
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYL 369
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 15/238 (6%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L++ MM G P V AL+D L + ++ L+ L+ M G +PN T+ ++
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627
Query: 91 ILCRSGKFEVVLGLLD---SGIYSSVM--YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C +G + LL + + Y V+ +SKK F A+ L E+
Sbjct: 628 HCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLEEL-ESHGTV 684
Query: 146 PGFSTYSSILD----GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P Y ++D R E E+ ++ L + K + +IQ L +
Sbjct: 685 PIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTS---LIQALCLASQL 741
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A ++ + + + C++K L K + EA+Q+ + I + G+ + ++ +
Sbjct: 742 EKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVNWQSNNSF 799
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 166/412 (40%), Gaps = 50/412 (12%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
+MR+ G V A S CNALL L R +I+ + L M + + P+ T+ ++ LC++
Sbjct: 272 VMRLGGAVDAAS-CNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKAR 330
Query: 97 KFEVVLGLLDS----------GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ + L + D G+ V++N +ID K G L EM G
Sbjct: 331 RIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINR 390
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY+ ++DG + K DR A
Sbjct: 391 PNTVTYNCLIDG---FFKAGNFDR----------------------------------AH 413
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F++ +E ++ T ++ L K GRV A++ ++ + +G+ + Y A ++
Sbjct: 414 ELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAF 473
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
C + +++ G P A+ ++ C G+ + ++S + G LD
Sbjct: 474 CGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDR 533
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
C + L+ +C +++++ L ++E+ D TY+ L+ L K G A ++ +
Sbjct: 534 SCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEK 593
Query: 386 M-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
M KE S ++ ++ C K + + MK EM P ++
Sbjct: 594 MIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 18/231 (7%)
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISE--RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
C +L+ L K GR +A+ + + + G +V + + + EV GL+
Sbjct: 177 CHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAK 236
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ ERG P +L++ V CG K E+L V+ G +D+ C++L+ + R
Sbjct: 237 LGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRD 296
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----------ELK 390
I + L ++EK K V T+ +L++ L K R++EA+++FD ++ E
Sbjct: 297 IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPD 356
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG--HKPDEATYKQVISGF 439
VV F ++ LC + + + +EM KMG ++P+ TY +I GF
Sbjct: 357 VV---LFNTLIDGLCKVGKEEDGLSLLEEM-KMGNINRPNTVTYNCLIDGF 403
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 23/331 (6%)
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR-RYEKTEVSDRIVGLMV---EKKL 179
K G G A L+EM + GFS I+ G R ++ +VGL+ E+ +
Sbjct: 186 KSGRAGDALHVLDEMPQANS---GFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGV 242
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
P F ++ KL K A + + +C +L L + +K
Sbjct: 243 FPDGFKLTQ--LVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG------YIPCAMEL 293
++ + +R I + VN LCK + +E + + +G P +
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360
Query: 294 SRFVASQCGKGKWKE----VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHI 349
+ + C GK ++ +EE+ +++ + C L++ + D+A L
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC---LIDGFFKAGNFDRAHELFR 417
Query: 350 KIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLK 408
++ + +V T + L+DGL K GR+ AV F+ MK + +++++ ++S C +
Sbjct: 418 QMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +AM+ +EML G PD Y +ISG
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGL 508
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E+ M G P N L+ L + + AS + M+++G+ P+ T+ +
Sbjct: 554 ELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAY 613
Query: 93 CRSGKFEVVLGLLDSGIYSS------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
C + + + +S V+YN++ID + D A + +M R + P
Sbjct: 614 CSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKR-VRP 672
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
+TY++IL G R + + ++ MVE+ P +
Sbjct: 673 NTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYI 710
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G D V +++ GF S N L+ ++ ++ L M GV P+ T+
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + L ++G F +V+ ++ G+ SV+ Y +I Y K + EMC+
Sbjct: 572 NTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCS 631
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ P Y+ ++D R DR + LM + K+
Sbjct: 632 TSKVPPNTVIYNILIDALCRNNDV---DRAISLMEDMKV 667
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 190/437 (43%), Gaps = 43/437 (9%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
+MR GF+ V + N L L R + A L M +G+ PN +T++++ LC+ G
Sbjct: 306 IMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEG 365
Query: 97 K-FEV--VLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
K F+ V + SG+ S V Y ++ Y KG+ AA L+EM + P TY
Sbjct: 366 KAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQ-KGCAPNSFTY 424
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ------------------ 193
+ +L R +T ++R++ M EK +G + +I
Sbjct: 425 NVLLQSLWRAGRTTEAERLLERMNEKGY--SLDTAGCNIIIDGLCRNSRLDVAMDIVDGM 482
Query: 194 ------KLSDMGKTYAA----EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
L +G ++ + I +R ++I T ++ AL KEGR EA +
Sbjct: 483 WEEGSGALGRLGNSFLSVVSDSSISQRCLPDQI-----TYSILISALCKEGRFDEAKKKL 537
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + I+ Y F++ CK + +LRD+ ++G P + + K
Sbjct: 538 LEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEK 597
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
K +E+ +L+S + +KG+ + +SL++ +C ++KA+ L ++ + + ++ ++
Sbjct: 598 HKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSF 657
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM-LK 422
D+L+ K A +FD + ++ + L + +A KN EM L+
Sbjct: 658 DLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEA-KNILEMALE 716
Query: 423 MGHKPDEATYKQVISGF 439
M YKQ+ISG
Sbjct: 717 MRVSIQSFPYKQIISGL 733
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 192/468 (41%), Gaps = 62/468 (13%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD- 76
V+ + +GL + + MRV G P V NA + AL + + A ++ M D
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDW 272
Query: 77 --GVS-PNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDF 128
G+ P++ T+ ++ C +G + L+D G V YN + + G
Sbjct: 273 QHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRV 332
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDG---------ARRYE----------------- 162
G A + L EM + + P TY+ I+ G ARR E
Sbjct: 333 GEAQELLREMAH-EGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391
Query: 163 ---------KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++RI+ M +K P F + ++Q L G+T AE + +R +
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTY--NVLLQSLWRAGRTTEAERLLERMNE 449
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ L C ++ L + R+ A+ I + E G +F++V+
Sbjct: 450 KGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS---- 505
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+ + +P + S +++ C +G++ E ++ L ++ K + DS + +
Sbjct: 506 --------ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIH 557
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
YC + + AI + +EK + TY++L+ G + + EE +++ MKE K +S
Sbjct: 558 GYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKE-KGIS 616
Query: 394 SS--SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ ++ C + KAM DEML+ P+ ++ +I +
Sbjct: 617 PNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAY 664
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 188/470 (40%), Gaps = 63/470 (13%)
Query: 31 GLEVYRMMRVYGFVPAVSAC--NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
+ +R +R P + N L+ A R++ + L LY ++ G P+ FT +L+
Sbjct: 92 AIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLL 151
Query: 89 AQILCRSGKFEVVLGLLDS---------GIYSS-----------------------VMYN 116
Q LC +G+ E+ + D+ GI + V+ N
Sbjct: 152 LQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCN 211
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
V+ + K+G A +RL E + L P T+++ + + + + RI M E
Sbjct: 212 TVVAGFCKEGLVEEA-ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE 270
Query: 177 --KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ LP+ D ++ D G A ++ + ++ L L + G
Sbjct: 271 DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNG 330
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI-PCAMEL 293
RV EA ++ ++ GI Y V+ LCKE + + + + + G + P +
Sbjct: 331 RVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDA-RRVENFIRSGVMSPDVVTY 389
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + + C KG +L + KG +SF + L++ + +A L ++ +
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNE 449
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE-------------LKVVSSSS---- 396
SLD A ++++DGL ++ R++ A+ I D M E L VVS SS
Sbjct: 450 KGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQR 509
Query: 397 -------FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ I++S LC +A K EM+ PD Y I G+
Sbjct: 510 CLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/445 (18%), Positives = 172/445 (38%), Gaps = 63/445 (14%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S ++++ +G D V +R P V +LL A + I
Sbjct: 345 EGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAA 404
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYS--SVMYNLVID 120
A+ + M + G +PN FT++++ Q L R+G+ E +L ++ YS + N++ID
Sbjct: 405 ANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIID 464
Query: 121 FYSKKGDFGAAFDRLNEMCN------GR----------------NLTPGFSTYSSILDGA 158
+ A D ++ M GR P TYS ++
Sbjct: 465 GLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISAL 524
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ + + + + + M+ K + P + D I GKT A + + +
Sbjct: 525 CKEGRFDEAKKKLLEMIVKDISPDSVIY--DTFIHGYCKHGKTSLAIKVLRDMEKKGCNP 582
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T +++ ++ + +E +++ + E+GI+ Y + + C++ + LL
Sbjct: 583 STRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLL 642
Query: 279 RDVVERGYIPCAM----------ELSRFVASQ---------CGK---------------G 304
++++ +P +++ F ++Q CG+ G
Sbjct: 643 DEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYG 702
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
KW E + +L L+ + + SF ++ C ++D A +L + + D A +
Sbjct: 703 KWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFM 762
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKEL 389
++D L G+ ++ + M E+
Sbjct: 763 PVIDALGDRGKKQDVDMLSAKMMEM 787
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 189/444 (42%), Gaps = 17/444 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + S +++ G + ++ R M ++G +P C + AL
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L+ M G PN +T++ + LC SG +V +GL D ++V YN +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Query: 121 FYSKKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ AF LN M GRN +P TY+ ++ G + D ++V +
Sbjct: 399 ILVENRRIKYAFVVLNLM--GRNGCSPNIVTYNEMIKG-----YCILGDPKKAMLVMNNM 451
Query: 180 LPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L + L + +I+ D G T +A I D + + + ++ K ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ A +++ + + G+ + Y A ++ CK+ + + LL + G P +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ + + EEL ++++G+ + +++++ C N A+ + K+ +
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
++ TY L+ L ++G++EEA +F ++ ++ ++V ++ ++ A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
M+K G +P TY +I G
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 180/447 (40%), Gaps = 65/447 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I+SC +++ + +S LD S GL M GL Y + ++ + + A++D +R
Sbjct: 151 LIKSCHSKEAMARTMSF-LDMLSQSGLRM-GLFAYSALLIH--LSRLGMTAAVMDRYHR- 205
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM------ 114
M+ +GV PN ++ V LC+ G ++ ++ S M
Sbjct: 206 ------------MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK-VFESEMSPDTFT 252
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +I + +K D +A N+M P TYS++++G + + ++ M
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 175 VEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ +LP H +G I L DMG A +F ++ E T ++ L
Sbjct: 312 ILHGILPTAHTCTGP---IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 368
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G +K AI ++H +S G+ Y A +N+L + + + +L + G P +
Sbjct: 369 GILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C G K+ +++ +L +G
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRG--------------------------------- 455
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
S ++ TY+ ++ G G A+RI D M++ S+ ++ C + ++
Sbjct: 456 --HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A +EM+ G P+E TY +I G+
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGY 540
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 173/452 (38%), Gaps = 66/452 (14%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ Y G L + +MR G P + L+ + +++ A L+ MV DG
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ PN+ T++ + C+ K + LL+ SG +V YN++I +K+ +F A
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA- 584
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L ++ + P TY++++DG + T ++ + M+E+ LP L +I
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN--LLTYSSLI 642
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ L GK AE +F + + T M++A G+V+ A + + G
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 253 VRDSDYYAFVNVLCKEHQ-PEEVCGLLRDVVER---GYIPCAMEL--------------- 293
Y + L E+ ++ L DVV GY +
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762
Query: 294 -----SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ V++ G+W E ELL +++ +GL D +SL+ R +D A+
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM--- 819
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK 408
G+FK + + KEL + LC L
Sbjct: 820 --------------------GVFKHMSTQGCEVHLNGYKEL-----------ICALCQLH 848
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++A + ML PD+ +I G +
Sbjct: 849 RRKEARITFENMLMRTWNPDDVVQAVLIDGLL 880
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 161/390 (41%), Gaps = 21/390 (5%)
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 118
R++++ A ++ M ++G PN T+S + LC SG+ L I +++ ++
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL----IREMILHGIL 317
Query: 119 IDFYSKKGDFGAAFD--------RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++ G A D RL + P TY++++ G +V+ +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGL 377
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYA---AEMIFKRACDEKIELQDDTCGCML 227
M + P + ++ N + + + YA ++ + C I ++ M+
Sbjct: 378 FHRMSRDGVFP-NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE----MI 432
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
K G K+A+ + + + +RG + Y + C +L + + G
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + C K + L + ++D GL + ++L++ YC + ++D A +L
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
+++ +V TY+VL+ GL K A + M E + + ++ ++ LC
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
A++ ++M++ G P+ TY +I
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 153/347 (44%), Gaps = 15/347 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS--G 108
N LL+ L R N++ A C + + + +++++ + LCR GK + L + G
Sbjct: 206 NKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRG 265
Query: 109 IYSS---VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
S + YN +I+ + + + D L E+ + +L+P TY+SI+ G + K E
Sbjct: 266 FGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKME 325
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR----ACDEKIELQDD 221
+ + M+ + P F + +I +G +AE +++ C I
Sbjct: 326 KASILFNNMISSGIKPNAFTF--NILINGFGKVGDMVSAENMYEEMLLLGCPPDI----I 379
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ + G+V+ +++++H ++ R ++ + + N LCKE++ E G LRD+
Sbjct: 380 TFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDL 439
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
R + + + C G E +L+ + +K D + L+ +C ++
Sbjct: 440 KWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRL 499
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+AI++ ++ + D T L+ L K G EA RI E
Sbjct: 500 SEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASE 546
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 115/342 (33%), Gaps = 112/342 (32%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEI--------------------------- 63
E++ MR +G P V N L++ R NE+
Sbjct: 256 AFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSII 315
Query: 64 ---------RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM 114
AS L+ M+ G+ PN FT
Sbjct: 316 SGYCKLGKMEKASILFNNMISSGIKPNAFT------------------------------ 345
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+N++I+ + K GD +A + EM C P T++S++DG R K E S ++
Sbjct: 346 FNILINGFGKVGDMVSAENMYEEMLLLGC-----PPDIITFTSLIDGHCRTGKVERSLKL 400
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+ + L P N+Y L++ AL
Sbjct: 401 WHELNARNLSP------NEYTFAILTN-------------------------------AL 423
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
KE R+ EA + R I + Y ++ CK +E +L ++ E+ P
Sbjct: 424 CKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDK 483
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ + + C KG+ E + + +L G DS +SL+
Sbjct: 484 ITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLI 525
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDV--VERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +N L + +Q +E R+ + + C+ + + C GK + EL +
Sbjct: 205 YNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNI--LIRGLCRIGKVDKAFELFNE 262
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI-EKLKGSLDVATYDVLLDGLFKDG 374
+ G D ++L+ +C ++D+ L ++ K S DV TY ++ G K G
Sbjct: 263 MRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLG 322
Query: 375 RMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
+ME+A +F+ M + ++ +F I+++ + ++ A ++EML +G PD T+
Sbjct: 323 KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFT 382
Query: 434 QVISG 438
+I G
Sbjct: 383 SLIDG 387
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
MI S G + +++++ + G + +Y M + G P + +L+D R
Sbjct: 334 MISS--GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRT 391
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MY 115
++ + L+ + +SPN++T++++ LC+ + G L + + MY
Sbjct: 392 GKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMY 451
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIV 171
N VID + K G+ A L EM R P TY+ ++ G R E + +R++
Sbjct: 452 NPVIDGFCKAGNVDEANVILAEMEEKR-CKPDKITYTILIIGHCMKGRLSEAISIFNRML 510
Query: 172 G 172
G
Sbjct: 511 G 511
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
DS + L+ C ++DKA L ++ S DV TY+ L++G R+ E R
Sbjct: 235 FDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGF---CRVNEVDRG 291
Query: 383 FDYMKEL--------KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
D +KEL VV+ +S ++S C L ++ KA + M+ G KP+ T+
Sbjct: 292 HDLLKELLSKNDLSPDVVTYTS---IISGYCKLGKMEKASILFNNMISSGIKPNAFTFNI 348
Query: 435 VISGF 439
+I+GF
Sbjct: 349 LINGF 353
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKN 416
+ Y+ LL+ L + +++EAV F + M S SF I++ LC + ++ KA +
Sbjct: 200 FSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFEL 259
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
+EM G PD TY +I+GF
Sbjct: 260 FNEMRGFGCSPDVITYNTLINGF 282
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 161/404 (39%), Gaps = 44/404 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P V + +++ L R+ ++ A CL+ M+ G+SPN T++ + C SGK +
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 102 LGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+G+ D V YN ++ + K G A + M + P S Y ++L
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK-KGHKPDSSIYGTLLH 319
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G +++ +MV P H+ IF
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHY----------------------IFN------- 350
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
++ A +K G V EA+ + + ++G+ Y ++ LC+ + ++
Sbjct: 351 --------ILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMS 402
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++ G P + + C KW + EEL ++ +G+ ++ ++L+ + C
Sbjct: 403 QFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLC 462
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
+ +A + + ++ DV TY L+DG DG+++EA ++ + M V +
Sbjct: 463 KEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEV 522
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ C + A +M G P Y ++ G
Sbjct: 523 TYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGL 566
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 173/430 (40%), Gaps = 27/430 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+L Y G + + ++R M G P V N L+ L + A ++ +MV+ G
Sbjct: 247 LLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKG 306
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAF 132
P+ + + G + LLD + + ++N++I Y+K G A
Sbjct: 307 HKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAM 366
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
++M + L P TY +++D R K + + ++ + L P N V
Sbjct: 367 LAFSKM-RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTP------NGVVF 419
Query: 193 QKL---------SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ L D + A EMI + C I +L L KEG V A I+
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNT-----LLNHLCKEGMVTRAKNIF 474
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
L+ + Y ++ C + + +E LL +V G P + + + C
Sbjct: 475 DLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKN 534
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ ++ L + KG+ S+++ R+I A L++ + K L + TY
Sbjct: 535 GRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTY 594
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
+++L GL ++ ++A+R+F + + + + +F I++ L +A +L
Sbjct: 595 NIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLA 654
Query: 423 MGHKPDEATY 432
G P+ TY
Sbjct: 655 RGLVPNVVTY 664
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 11/310 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P N LL+ L ++ + A ++ MVR V + T++ + C GK +
Sbjct: 446 GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505
Query: 102 LGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL+ + + V YN +I+ Y K G A +M + + + PG YS+IL
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMAS-KGVNPGIVIYSTILH 564
Query: 157 GARRYEKTEVSDRIVGLMVEKKL-LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
G + + + + M++ + LP + + ++Q L T A +F C
Sbjct: 565 GLFQTRRIAAAKELYLWMIKCGIKLP---IGTYNIILQGLCQNNCTDDALRMFHNLCLID 621
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
LQ+ T M+ AL K GR EA ++ + RG+ Y+ + L ++ EE+
Sbjct: 622 FHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 681
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
L + + G + L+ V KG+ ++ LS + + L++ SL+ +
Sbjct: 682 DLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV-FL 740
Query: 336 CSNRQIDKAI 345
S+ + D+ I
Sbjct: 741 VSSGKYDQHI 750
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 101/265 (38%), Gaps = 39/265 (14%)
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P+ L VI S G A R Q T +LK L + R +A
Sbjct: 91 MPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDA 150
Query: 240 IQI-YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR----DVVERGYIPCAMELS 294
+ I + G T Y + LC E++ ++ LL D G P + +
Sbjct: 151 MDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYT 210
Query: 295 RFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
+ +G+ + L +LD+G+ + + L+ YCS+ + +AI + K+ +
Sbjct: 211 TVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRD 270
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAM 414
DV TY+ L+ L K+GR EA ++FD
Sbjct: 271 GVEPDVVTYNTLMVYLCKNGRSMEARKVFD------------------------------ 300
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
M+K GHKPD + Y ++ G+
Sbjct: 301 ----SMVKKGHKPDSSIYGTLLHGY 321
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/403 (17%), Positives = 174/403 (43%), Gaps = 24/403 (5%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++ Y+ G+ + + + MR G P + ++DAL R ++ A + ++
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFG 129
+G++PN + + LC K+ E+ + ++ GI +++ +N +++ K+G
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468
Query: 130 AA---FD---RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
A FD R++ C+ TY++++DG K + + +++ MV + P
Sbjct: 469 RAKNIFDLMVRVDVQCD-------VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I G+ A +F++ + + +L L + R+ A ++Y
Sbjct: 522 VTY--NTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELY 579
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + GI + Y + LC+ + ++ + ++ + + + +
Sbjct: 580 LWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKG 639
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ E ++L +++L +GL+ + +M+ +++ L + +EK + D
Sbjct: 640 GRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRML 699
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKE----LKVVSSSSFVIVVS 402
+ L+ L + G + +A + E L+ ++ S V +VS
Sbjct: 700 NALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVS 742
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 186/445 (41%), Gaps = 18/445 (4%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G L++V++C H + G V M G P V L++ L + + A
Sbjct: 37 GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAA 96
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS------GIYSSVMYNLVID 120
+ ++ G N +T + LC+ G + L+ G + Y+ ++D
Sbjct: 97 ARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMD 156
Query: 121 FYSKKGDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
K G A + + M C G + P Y+S++ G + + + ++G M+ K +
Sbjct: 157 SLCKDGMLCLALNFFSGMTCKG--IQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGI 214
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+P + + ++ GK A+ I +E T ++ ++ +A
Sbjct: 215 MPN--VQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDA 272
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
++++ L+ +G+ Y + ++ CK + +L ++V G + S +
Sbjct: 273 VKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGG 332
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
C G+ + EL + + L + C+ +++ + +AI+L K+EK+ L+
Sbjct: 333 FCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELN 392
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD 418
+ TY+++LDG+ G+ +A +F + + + ++ ++ LC L A D
Sbjct: 393 IVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDA---ED 449
Query: 419 EMLKM---GHKPDEATYKQVISGFM 440
++KM G P+E TY ++ G +
Sbjct: 450 LLMKMEENGCPPNEFTYNVLVRGLL 474
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 148/389 (38%), Gaps = 36/389 (9%)
Query: 2 IQSCEGRDSQSD---ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
++ EGR+ D A S ++D G+ L + M G P + A N+L+ L
Sbjct: 135 LEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLC 194
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV 118
A+ L G M+R G+ PN T++++ C+ GK ++ ++ V
Sbjct: 195 SFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGV----- 249
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
P TY+S++ G + + ++ LM+ K
Sbjct: 250 --------------------------EPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKG 283
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
LLP + +I A + + + L T ++ K GR +
Sbjct: 284 LLPN--VVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEA 341
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AI+++ + E ++ L K E L R + + + + +
Sbjct: 342 AIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLD 401
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C GK+ + EL S + KG+ +D +++++ C +D A L +K+E+
Sbjct: 402 GMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPP 461
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMK 387
+ TY+VL+ GL + + + + MK
Sbjct: 462 NEFTYNVLVRGLLQRYDISRSTKYLMLMK 490
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 163/401 (40%), Gaps = 45/401 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN-EIR 64
EG + A S ++ Y G + ++V+ M+ G P + NA++DA + +
Sbjct: 214 EGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFN 273
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVI 119
A+ ++ M+R+GV P++ T++ + + R G +E L +Y + YN ++
Sbjct: 274 RAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLL 333
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D K G AF ++EM +++ P TYS+++DG Y K D + L E K
Sbjct: 334 DAVCKGGQMDLAFQIMSEMPR-KHIMPNVVTYSTVIDG---YAKAGRLDEALNLFNEMKF 389
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
I L + +L +K GR +EA
Sbjct: 390 ----------------------------------ASIGLDRVSYNTLLSIYAKLGRFEEA 415
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + GI Y A + K+ + EEV + ++ P + S +
Sbjct: 416 LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDV 475
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G ++E E+ GL D S+L++ C N ++ A++ ++ K +
Sbjct: 476 YSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPN 535
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV 400
V TY+ ++D + G E + Y + +SSSS +V
Sbjct: 536 VVTYNSIIDAFGRSGSAECVIDP-PYETNVSKMSSSSLKVV 575
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 4/252 (1%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L +G+ A+ +F+ A +E ++ A + G EAI+++ + G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 251 ITVRDSDYYAFVNVLCKEHQP-EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK-WKE 308
+ Y A ++ K + +++ G P + + +A CG+G W+
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAV-CGRGGLWEA 309
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
L S +L +G+ D F ++L++ C Q+D A + ++ + +V TY ++D
Sbjct: 310 ARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVID 369
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G K GR++EA+ +F+ MK + + S+ ++S L +A+ EM G K
Sbjct: 370 GYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKK 429
Query: 428 DEATYKQVISGF 439
D TY ++ G+
Sbjct: 430 DAVTYNALLGGY 441
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 163/397 (41%), Gaps = 45/397 (11%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLL 105
+A++ L R ++ LA ++ + +G + +S + RSG +V +
Sbjct: 188 ASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMK 247
Query: 106 DSGIYSS-VMYNLVIDFYSKKG-DFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYE 162
SG+ + V YN VID K G DF A + +EM NG + P T++S+L R
Sbjct: 248 SSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNG--VQPDRITFNSLLAVCGRGG 305
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
E + + M+ + + F + ++ + G+ A I + I T
Sbjct: 306 LWEAARNLFSEMLYRGIEQDIFTY--NTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVT 363
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
++ +K GR+ EA+ +++ + I + Y +++ K + EE + +++
Sbjct: 364 YSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 423
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
G A+ + + +GK++EV+ + + + + + S+L++ Y
Sbjct: 424 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 483
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVS 402
+A+ + + +K DV Y L+D L K+G +E AV SF+
Sbjct: 484 EAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAV---------------SFL---- 524
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
DEM K G +P+ TY +I F
Sbjct: 525 ---------------DEMTKEGIRPNVVTYNSIIDAF 546
>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14770, mitochondrial-like, partial [Cucumis
sativus]
Length = 697
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 189/441 (42%), Gaps = 14/441 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + +++LD G + L M V G V AC L+D L++ +I+ A
Sbjct: 54 GMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEA 113
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF---EVVLGLLDSG--IYSSVMYNLVIDF 121
L+ + + + PN T+S + C+ G E L ++ + + + Y+ +I+
Sbjct: 114 EYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLING 173
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y K+G AF L +M + +N P TY+ +LDG+ + +++ + M + L
Sbjct: 174 YVKQGLLHDAFKVLRKMVH-KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKD 232
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
F+ D + + G+ AE + + ++ ++ K G+V A+
Sbjct: 233 NVFIL--DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALN 290
Query: 242 IYHLISERGITVRDSDYYAFVNVLCK--EHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ ++ + + + +N L K + E + +R E G P + +
Sbjct: 291 LAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMR---EMGLSPDLATYNTMLNG 347
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
KG W EL + + + L+ ++ C+ ++ C +++ AI + ++ +
Sbjct: 348 NFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPT 407
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHD 418
TY +LL+ K R + ++ + + +++ V + I++S LC L RKA
Sbjct: 408 STTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLK 467
Query: 419 EMLKMGHKPDEATYKQVISGF 439
+M + G D TY +I G+
Sbjct: 468 DMEERGIIADTTTYNALIHGY 488
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 191/430 (44%), Gaps = 10/430 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +++ Y +GL D +V R M +P + LLD ++ +A LY M +
Sbjct: 168 SSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQ 227
Query: 76 DGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
G+ N F + RSG+ E +V + G+ V Y ++D + K G +
Sbjct: 228 GGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSS 287
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + EM + +N+ T++ +++ + K++ ++ I M E L P L+ +
Sbjct: 288 ALNLAQEMTS-KNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPD--LATYNT 343
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ G +A ++ K+ TC M+ L + GR++ AI I + G
Sbjct: 344 MLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMG 403
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ + Y +N+ K + + + +V + +++ C G ++
Sbjct: 404 LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKAT 463
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L + ++G++ D+ ++L+ YC + + +A + + + S D+ TY++LL GL
Sbjct: 464 AVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGL 523
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K G + EA + +K+ +V ++ ++ ++ C ++ ++ ++ + EM+ G P
Sbjct: 524 SKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKP 583
Query: 430 ATYKQVISGF 439
Y +I F
Sbjct: 584 RAYNMLIGYF 593
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 172/423 (40%), Gaps = 53/423 (12%)
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF-EVVLGLLDSG----IYSSVM 114
QN + A LY MV G+ P+ T+ + LC+ GK E L L + G ++V
Sbjct: 2 QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEM--------------------------------CN-- 140
Y +++D K G A L M CN
Sbjct: 62 YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG---NDYVIQKLSD 197
NL P + TYS+++DG + ++ + M EK +P N YV Q L
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+M+ K A T +L K G A+ +Y + + G+ +D+
Sbjct: 182 DAFKVLRKMVHKNAMPNIC-----TYAILLDGSFKAGWQDIALDLYSKMKQGGL--KDNV 234
Query: 258 YY--AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
+ AFVN + + + EE L+ + G P + + + GK L
Sbjct: 235 FILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQE 294
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ K ++ D + L+ + D +++ + ++ S D+ATY+ +L+G FK G
Sbjct: 295 MTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGN 353
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
A+ +++ MK K++ ++ + I+++ LC + A+ EM+ MG P TY+
Sbjct: 354 WTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRI 413
Query: 435 VIS 437
+++
Sbjct: 414 LLN 416
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 124/297 (41%), Gaps = 8/297 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D +Y MR G P ++ N +L+ +++ A L+ M + PN T +++
Sbjct: 321 DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMI 380
Query: 90 QILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC +G+ E + +L G+Y +S Y ++++ S K + +E+ L
Sbjct: 381 NGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNI-SSKSRRADTILQTHELLVNMQL 439
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
Y+ ++ + T + ++ M E+ ++ + + +I A
Sbjct: 440 KVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADT--TTYNALIHGYCISSHLKRA 497
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
M + E++ +T +L LSK G + EA + I +RG+ Y +
Sbjct: 498 FMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCG 557
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
CK +E + ++V +G+IP + + GK K+ +EL++ + KG+
Sbjct: 558 HCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGV 614
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 9/271 (3%)
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MV + P G+ ++ L GK +++ + + L + + +L AL K
Sbjct: 15 MVGSGIFPDVVTFGS--ILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKA 72
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G+V EA+ + RG ++ L K Q +E L ++ + +P +
Sbjct: 73 GKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITY 132
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + +C G E L + +K + + SSL+ Y + A + K+
Sbjct: 133 SALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVH 192
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE--LK--VVSSSSFVIVVSRLCHLKE 409
++ TY +LLDG FK G + A+ ++ MK+ LK V +FV + R ++E
Sbjct: 193 KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEE 252
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + +M G KPD Y ++ GF+
Sbjct: 253 AEELVA---KMASGGLKPDLVNYTNLMDGFL 280
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
EE L ++V G P + + C GK E + LL + G+ L++ + L
Sbjct: 6 EEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTIL 65
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ ++ +A+ + + DV VL+DGLFK G+++EA +F + +L +
Sbjct: 66 LDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL 125
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
V + ++ ++ C L ++ A EM + P+ TY +I+G++
Sbjct: 126 VPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYV 175
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 187/437 (42%), Gaps = 56/437 (12%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD- 76
+L Y + GLF + ++++ +M+ G P+V N+LL L ++ +A ++ M
Sbjct: 103 LLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 162
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
GV+P+ +T++++ + C++ ++D G F+ + F
Sbjct: 163 GVTPDTYTFNILIRGFCKN-------SMVDEG----------FRFFKEMSRF-------- 197
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEK-KLLPKHFLSGND----YV 191
N P TY++++DG R K ++ +V MV+K K L ++ Y
Sbjct: 198 ------NCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYC 251
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL---SKEGRVKEAIQIYHLISE 248
+++ D A ++F+ ++ D T ++K L K ++KE + +
Sbjct: 252 MKQEID-----EALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILG--GAVGG 304
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG Y +N C +E + + + E P + S + + C +G ++
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYY-------CSNRQIDKAIALHIKIEKLKGSLDVA 361
E+L + D+ +LL C+ L+ Y C N + KA + ++ K KG+ D
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMK-KGTQDPP 423
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEM 420
+Y L+ G K+G E ++ +M V ++V++++ E A K + M
Sbjct: 424 SYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERM 483
Query: 421 LKMGHKPDEATYKQVIS 437
LK + P + + ++S
Sbjct: 484 LKSSYLPKTSVFHSILS 500
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 60/349 (17%)
Query: 107 SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
SG+ SV+ +N ++ K+G A +EMC +TP T++ ++ G
Sbjct: 126 SGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRG-------- 177
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
+ + D G + EM + C+ + T
Sbjct: 178 ------------------------FCKNSMVDEGFRFFKEMS-RFNCEPDVV----TYNT 208
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSD-------YYAFVNVLCKEHQPEEVCGLL 278
++ L + G+V+ A + +G+ + D Y V C + + +E +
Sbjct: 209 LVDGLCRAGKVRIAHNVV-----KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVF 263
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS-AVLDKGLLLDSFCCSSLMEYYCS 337
++V RG P + + + C K+ +++E+L AV +G + D+ ++LM C
Sbjct: 264 EEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCD 323
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS--- 394
D+A+ + K+++LK D ATY VL+ L + G E A ++FD + + ++
Sbjct: 324 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDG 383
Query: 395 -----SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+++ + LC + KA + +++K G + D +YK +I G
Sbjct: 384 CTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIG 431
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 147/367 (40%), Gaps = 56/367 (15%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR-------DGV 78
G F + L++++ M+ P + + L+ L ++ + A L+ + DG
Sbjct: 325 GNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGC 384
Query: 79 SPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
+P ++ + LC++GK V L+ G Y +I + K+G F A +
Sbjct: 385 TPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKL 444
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L M R+ P F TY +++G + + ++ + + M++ LPK S ++ +
Sbjct: 445 LLFMLR-RDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKT--SVFHSILSE 501
Query: 195 L--SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L +D + A+ ++ D KI + ++ L G +A QI L+ + G
Sbjct: 502 LLKNDFARESASFVVL--MIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYM 559
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
V EE+ G + C GK + +++
Sbjct: 560 V----------------DMEELIGFI----------------------CQNGKLLDAQKM 581
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
LS L+KG +D C+ ++E C ++ +A L+ + + ++ + L L
Sbjct: 582 LSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEA 641
Query: 373 DGRMEEA 379
GR EEA
Sbjct: 642 GGRSEEA 648
>gi|356533418|ref|XP_003535261.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 514
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 180/417 (43%), Gaps = 38/417 (9%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+F D L+V+ + G V +C L AL R NE+ + MV
Sbjct: 120 MFRDALKVFDYVMTKGLVVEARSCFMLFLALKRCNEVEFCVRFFRRMVESS--------- 170
Query: 87 LVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC--NGRNL 144
+D G+ S +++D K+G G A + + EM RN+
Sbjct: 171 -----------------HVDIGVQS---LTVMVDVLCKRGKVGRAKELMKEMTVRGVRNV 210
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
Y S++ + + + M+ + ++P G +I ++ +G+
Sbjct: 211 EMDVFVYKSMISWTCKAGNVRMVSALFDEMILRGIVPNTHTFGE--LISRVCKVGQMEVL 268
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+++ + + ++L M+ G V +A ++ + + + V Y +
Sbjct: 269 KILLEEMQSKGVDLIVVIFNMMMDGYYIRGMVDKAFRLQDTMEGKRLEVDVFIYNILASW 328
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCK H EE +L +V++G P M + F+ C +G EVE L ++ +G++ +
Sbjct: 329 LCKLH--EEANRVLTVMVKKGVAPNVMTCTTFIEIYCKEGNLAEVERFLKSMEKRGMVPN 386
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIF 383
S+L++ Y N ++ +A L +I + KG L DV TY L+ G + +++EA+++F
Sbjct: 387 IVKYSTLIDXYSRNEKVKRAYVLQAEIIE-KGLLPDVFTYTSLILGEYIVVKVDEALKLF 445
Query: 384 DYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ M + + ++ ++S L +A K DEM++MG PD+ Y ++ +
Sbjct: 446 NEMXVNDIRGNMKTYTTIISGLSKEGRADEAFKLFDEMMRMGLIPDDRVYAALVGSY 502
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 162/397 (40%), Gaps = 91/397 (22%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPA---VSACNALLDALYRQNEIRL 65
D +L++++D +G E+ + M V G V +++ + +R+
Sbjct: 173 DIGVQSLTVMVDVLCKRGKVGRAKELMKEMTVRGVRNVEMDVFVYKSMISWTCKAGNVRM 232
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVID 120
S L+ M+ G+ PN T+ + +C+ G+ EV+ LL+ G+ V++N+++D
Sbjct: 233 VSALFDEMILRGIVPNTHTFGELISRVCKVGQMEVLKILLEEMQSKGVDLIVVIFNMMMD 292
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y +G AF RL + G+ L Y+ + + E ++R++ +MV+K +
Sbjct: 293 GYYIRGMVDKAF-RLQDTMEGKRLEVDVFIYNILASWLCKLH--EEANRVLTVMVKKGVA 349
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P TC ++ KEG + E
Sbjct: 350 PNVM-------------------------------------TCTTFIEIYCKEGNLAEVE 372
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + +RG+ Y ++ + + V+R Y+
Sbjct: 373 RFLKSMEKRGMVPNIVKYSTLIDXYSRNEK-----------VKRAYV------------- 408
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM--EYYCSNRQIDKAIAL--HIKIEKLKG 356
L + +++KGLL D F +SL+ EY ++D+A+ L + + ++G
Sbjct: 409 -----------LQAEIIEKGLLPDVFTYTSLILGEYIVV--KVDEALKLFNEMXVNDIRG 455
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
++ TY ++ GL K+GR +EA ++FD M + ++
Sbjct: 456 NM--KTYTTIISGLSKEGRADEAFKLFDEMMRMGLIP 490
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 181/436 (41%), Gaps = 10/436 (2%)
Query: 8 RDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
RD + +LD + + + VY MR G P V N L+ AL + + + A
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGD 127
+ M R G P++ + + +C+ G+ E G L + YN V+ +
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFR 237
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
F +NEM R L P TY++I+D + + ++ I+ MV P + L+
Sbjct: 238 MWEVFSVVNEMVQ-RGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTP-NVLTF 295
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
V D GK + A ++ DE + +++ L G +K A+ ++ +
Sbjct: 296 TALVKGFFED-GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 354
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ + Y V+ + + ++ G P + + + C K +
Sbjct: 355 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ E L+ +L ++ ++L+ C ++ +A+ + + + + TY+ LL
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474
Query: 368 DGLFKDGRMEEA----VRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
GLF++G ++A + + + EL +V+ ++ V++ LC + + AM M+
Sbjct: 475 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT---VINCLCQMCMRKHAMLLLGRMMVQ 531
Query: 424 GHKPDEATYKQVISGF 439
G +PD T+ +I +
Sbjct: 532 GIQPDAFTFNAIIHAY 547
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 153/364 (42%), Gaps = 25/364 (6%)
Query: 35 YRMMRVY---------GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
+RM V+ G P V ++DA + E+R+A + MV G +PN T+
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295
Query: 86 SLVAQILCRSGKFEVVLGL----LDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + + GK L + +D G S++ YN++I GD A D N M
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM-- 353
Query: 141 GRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN--DYVIQKLS- 196
RN L P +TYS+++DG + + I M P + N D + +K+
Sbjct: 354 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 413
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
D ++ +M+ + T ++ L GRV A+ ++H + G D
Sbjct: 414 DQAESLIDKMLMDNCPPNTV-----TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDR 468
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ L +E ++ ++ +++ G+ + + + C K LL +
Sbjct: 469 TYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM 528
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ +G+ D+F ++++ YC ++ A L ++ + +V Y +L+ L G++
Sbjct: 529 MVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKL 588
Query: 377 EEAV 380
A+
Sbjct: 589 SNAM 592
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 202/482 (41%), Gaps = 48/482 (9%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+++ +G+ S + + V+ G + L +R ++ F V N LLD L R
Sbjct: 86 VVKKWDGKSSCRETVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRH 142
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC---RSGKFEVVLG-LLDSGIY-SSVMY 115
+++ A ++ MV GV PN FT++++ Q C S + G ++D G SS +Y
Sbjct: 143 RDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLY 202
Query: 116 NLVID---FYSKKGDFGAAFDR------LNEMCNGRNLTPGFSTYSSILDGARRYE---- 162
V + K+G+F F R EM + L F ++ ++ +
Sbjct: 203 QKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVK 262
Query: 163 ------------------KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
K E D L +E + K L+ N LS + K+
Sbjct: 263 SGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLN-NVAWTAFLSGLCKSGKI 321
Query: 205 EMIFK--RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
E F+ R E + +++ L + GR+ +A + I+ R I ++ +
Sbjct: 322 EQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVI 381
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
LCK + + LL +++RGY P S + C K +E +E L +D+ +
Sbjct: 382 QELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG-MDRKIS 440
Query: 323 LDSFCC---SSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEE 378
S C +SL+ C +++ +A A+ + + + DV +Y +L+DG K +
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500
Query: 379 AVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A +++ M +L V + +++ ++ L + A ++EM+ G PD TY +I
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560
Query: 438 GF 439
GF
Sbjct: 561 GF 562
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 186/425 (43%), Gaps = 20/425 (4%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP-NKFTWSL 87
++ +++R M G P + + ++ A + + A L+ M + +P N W+
Sbjct: 251 IEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTA 310
Query: 88 VAQILCRSGK----FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMC---N 140
LC+SGK FE + +S S +Y+++I + G D+ E C
Sbjct: 311 FLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESG----RIDKAEEACLEIA 366
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
GRN+ P T S++ + + + + ++ M+++ P ++ + +I +L K
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPD--MATHSMLINELCKADK 424
Query: 201 TYAAEMIFKRACDEKIELQDDTC---GCMLKALSKEGRVKEAIQIYH-LISERGITVRDS 256
A+ F + D KI + +C +L +L K +V +A I+ ++SER
Sbjct: 425 IQEAQE-FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y ++ CK + L + +++ +P + F+ KG+ + + + +
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+ G D S+L+ + R+ D+A L + + TY+ LL GL K+ +
Sbjct: 544 VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKP 603
Query: 377 EEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+EA +F M E ++ ++ C++ ++ +A++ DEM+ GH PD Y +
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 436 ISGFM 440
+ GF
Sbjct: 664 LKGFF 668
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 167/404 (41%), Gaps = 46/404 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EV 100
P+ C++++ L + + A L M++ G P+ T S++ LC++ K E
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431
Query: 101 VLGL---LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ G+ + S S YN +++ K AF + M + R+ P +YS ++DG
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
K+ ++G+ AE ++K+ D
Sbjct: 492 ----------------------------------FCKIDELGR---AEKLYKQMIDLNCV 514
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T L L ++GR+ +A +Y + G + Y ++ + ++ L
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ RG P A+ + + C + K E EL ++++G D ++L+ +C+
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-S 396
+I++A+ + ++ DV Y+ LL G F+ G+ EA ++F M + + S
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694
Query: 397 FVIVVSRLCHLKELRKAMKNHDEMLK-MGHKPDEATYKQVISGF 439
I++ L K L A++ + M + G PD TY +I G
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 25/253 (9%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG D VY M G P V + L+ + A L+ M+ G PN T
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVT 589
Query: 85 WSLVAQILCRSGK----FEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + LC+ K E+ +++ G V Y ++ + G A + +EM
Sbjct: 590 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV 649
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ + P Y+ +L G R K + ++ +MV ++ P ++ +I LS
Sbjct: 650 S-KGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTV--SHNIMIDGLSKAK 706
Query: 200 KTYAAEMIFKRACDEKIELQDDTC-------GCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ A +F E++E QD C ++ L E R+ EA++++ I ++
Sbjct: 707 RLDDAVEVF-----ERME-QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLS 760
Query: 253 VRDSDYYAFVNVL 265
D +AF NVL
Sbjct: 761 ---PDPHAF-NVL 769
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 184/429 (42%), Gaps = 11/429 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++LD + + + + MR G P + N L++A+ + ++ A + +
Sbjct: 290 SILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPS 349
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
G P+ T++ V + LC S +++ V LL ++ V +N ++ ++G
Sbjct: 350 HGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDR 409
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + ++ M + TYSSILDG + V D + L K K
Sbjct: 410 AIEVVDHM-SEHGCVADIVTYSSILDGL--CDVGRVDDAVELLSRLKSYGCKPDTIAYTT 466
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V++ L + AE + + T ++ +L ++G V AI++ +SE G
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ LC E ++ LL D+ G P + + + CG +W++ E
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE 586
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDG 369
+L++ ++ D ++++ C + +AI +KI G + + +TY +++D
Sbjct: 587 QLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET-LKIMAENGCVPNSSTYSIVVDA 645
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
L K G+ + A+ + M ++ V+S L ++ +A+ M+ G PD
Sbjct: 646 LLKAGKAQAALELLSGMTN-GTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDT 704
Query: 430 ATYKQVISG 438
TY+ + G
Sbjct: 705 TTYRSLAYG 713
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 172/416 (41%), Gaps = 50/416 (12%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
+ R++ F P N L+ AL + I A ++ M+ G SP+ T+S++
Sbjct: 237 DARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDAT 296
Query: 93 CRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C+ + + LLD G V YN++I+ +GD A + L+ + P
Sbjct: 297 CKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNL-PSHGCKPD 355
Query: 148 FSTYSSILD---GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
TY+ +L G+ R+++ E +LL A
Sbjct: 356 AVTYTPVLKSLCGSERWKEVE------------ELL-----------------------A 380
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
EM +++ T ++ +L ++G V AI++ +SE G Y + ++
Sbjct: 381 EMTSNNCAPDEV-----TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDG 435
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + ++ LL + G P + + + C +W+ EEL++ +L D
Sbjct: 436 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPD 495
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++++ C +D+AI + ++ + S D+ TY+ ++DGL + +++A+ +
Sbjct: 496 EVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS 555
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +F ++ LC + A + M++ PDE T+ VI+
Sbjct: 556 DLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 154/385 (40%), Gaps = 16/385 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +LD G D +E+ ++ YG P A +L L + A L M+
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
P++ T++ V LC+ G VV + ++G V YN +ID +
Sbjct: 490 SDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L+++ P T++++L G ++ E +++++ M+ P +
Sbjct: 550 AMELLSDL-QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTF--NT 606
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI L G A K + T ++ AL K G+ + A+++ G
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS-----G 661
Query: 251 ITVRDSD---YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+T D Y ++ L K + EE LLR +V G P C +
Sbjct: 662 MTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTD 721
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+L V D GL D+ + ++ +C +R+ D AI + D +TY +LL
Sbjct: 722 RAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILL 781
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVV 392
+ L G ++EA R+ + L V+
Sbjct: 782 EALAYGGLLDEAKRLLASLCSLGVL 806
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 156/356 (43%), Gaps = 10/356 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF--- 98
G V VS N L++A + I A L+G M G +P+ T++ + LCR +
Sbjct: 97 GLVNTVSY-NILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEA 155
Query: 99 -EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LL SG +S + YN+++D + K A + LNE+ R + Y+ I+D
Sbjct: 156 QQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELV-ARGGVVTSAPYNCIID 214
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ K ++ M + + P+ +I L + A+ IF +
Sbjct: 215 TLFKKGKIHEAELFFNRMEKDGVRPQEVTF--TVLIDGLCKANRVARAKEIFFSYLESGG 272
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
C C++ K G V EA +I+ L++ RG T D +N LCK + +
Sbjct: 273 SPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQARE 332
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ +VV+R P + S F+ C + + ++L ++DKG D ++L+ C
Sbjct: 333 VFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLC 392
Query: 337 SNRQIDKA-IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
S ++D+A + + + + T +VL++G GR++EA +F E V
Sbjct: 393 SLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGV 448
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ L + R+ EA Q Y + G Y V+ CK + E LL ++V RG
Sbjct: 142 LIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARG 201
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ + + + + KGK E E + + G+ + L++ C ++ +A
Sbjct: 202 GVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAK 261
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
+ + GS V L+DG K G ++EA RIF+ M + S I+++ L
Sbjct: 262 EIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGL 321
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C K L +A + +E++K KPD TY + G
Sbjct: 322 CKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGL 356
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D + + +E+ + G V + N ++D L+++ +I A + M +
Sbjct: 175 NILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEK 234
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVMY-NLVIDFYSKKGDFGA 130
DGV P + T++++ LC++ + E+ L+SG SV+ + ++D + K G
Sbjct: 235 DGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDE 294
Query: 131 AF-------DR------------LNEMCNGRNLT---------------PGFSTYSSILD 156
A+ +R +N +C + L+ P TYS+ +D
Sbjct: 295 AWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMD 354
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK---RACD 213
G R + + + +++ ++V+K P + +I L +G+ A +F+ RA
Sbjct: 355 GLCRAHRVDQARQVLCMLVDKGGTPDVVMY--TALISGLCSLGRLDEARKVFEVDMRA-- 410
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
+ TC ++ GR+ EA +++ ERG+ + A N
Sbjct: 411 AGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMAN 460
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LC + +E L +V G C + V G+ +E +++ +LD+ L +
Sbjct: 9 LCHVGKLDEALELFHSLVSDG---CGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ ++ C + IDKA + +++ +G ++ +Y++L++ K R++EA+++F
Sbjct: 66 RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 385 YMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK S+S++ ++ LC ++ L +A + ++ +L G TY ++ GF
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGF 181
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 103/252 (40%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D ++++LS G+ + K D + + + +L K + +A + + +
Sbjct: 35 DLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKD 94
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
V Y +N CK + +E L ++ G P + + C + E
Sbjct: 95 FRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGE 154
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++ +L G + L++ +C ++ +A+ L ++ G + A Y+ ++D
Sbjct: 155 AQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIID 214
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
LFK G++ EA F+ M++ V +F +++ LC + +A + L+ G P
Sbjct: 215 TLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSP 274
Query: 428 DEATYKQVISGF 439
++ GF
Sbjct: 275 SVVICSCLMDGF 286
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 8/298 (2%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS + +H F + + + M+ YGF+P V +CNA L +L + + +A
Sbjct: 143 DSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALA 202
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYS 123
Y M R +SPN +T ++V + C+SGK E + + + GI + YN +I Y
Sbjct: 203 FYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYC 262
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+KG +A N M + + T++S++DG + K + ++ M + P
Sbjct: 263 RKGLLNSAVKLKNSM-RAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT 321
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ +I S MG + +++ ++ T ++ L KEG+ K+A +
Sbjct: 322 ITY--NTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMV 379
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
+ + + S + A ++ C + + L + +V G P + V++ C
Sbjct: 380 KELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFC 437
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+++A K G++++A+Q++ + GI+ D+ Y + C++ L + +G
Sbjct: 222 VMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKG 281
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
+ + + C +GK E ++ S + + ++ ++L+ + +
Sbjct: 282 VEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGR 341
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRL 404
L+ ++ + D+ TY+ L+ GL K+G+ ++A + + KE V ++S+F ++S
Sbjct: 342 RLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQ 401
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C +A + + M+++G P+E T+ ++S F
Sbjct: 402 CIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAF 436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
K + A + R CD + D + K L+ + + A + + G
Sbjct: 130 KLFEAILYSYRMCDSSPRVFDS----LFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCN 185
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A+++ L H+ + +++ P + + + C GK ++ ++ +
Sbjct: 186 AYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESV 245
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G+ + ++L+ YC ++ A+ L + +V T++ L+DG K+G++ EA
Sbjct: 246 GISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEA 305
Query: 380 VRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++F MK L V ++ ++ +++ + + ++EM + G K D TY +I G
Sbjct: 306 SKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILG 365
Query: 439 F 439
Sbjct: 366 L 366
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 187/456 (41%), Gaps = 35/456 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ +L+ + +G D L+++ +M G VP +C+ LLD ++ + A L+ +
Sbjct: 379 NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLA 438
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G++ N T + V LC++ + L S S+ Y +ID Y K GD G
Sbjct: 439 RGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGR 498
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A EM N P ++S + G +++ + I M K L P G
Sbjct: 499 ATQIRIEMEN-LGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYG--A 555
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA----------- 239
+I G + A +++ ++ ++ C ++ +EG+V EA
Sbjct: 556 LIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTD 615
Query: 240 -IQ-----------IYHLISERGITVRDSDYYAFVNV---LCKEHQPEEVCGLLRDVVER 284
IQ + H+I S + V LCK + + L D+ +
Sbjct: 616 MIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVK 675
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G+IP S + G L +L L + +SL+ C + + +A
Sbjct: 676 GFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRA 735
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSR 403
++L K++ S + TY+ L+DG KDG EA ++ M KE + ++ I++
Sbjct: 736 VSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHG 795
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC + +A+K D+M++ P+ TY +I G+
Sbjct: 796 LCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGY 831
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 195/471 (41%), Gaps = 51/471 (10%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ L+L ++ G D L V+ M G + +CN LL+ L + +I A ++ M
Sbjct: 96 SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKGDF 128
G P+ FT +++A+ CR G+ L + G+ + V Y+ V+D Y + G
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE-KKLLPKHFLSG 187
A L+ + + L+P TY+ ++ G + + E ++++V + E +K++ G
Sbjct: 216 EVARKLLHSL-QVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYG 274
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I G+ A + D +++ M+ K GR+ E ++
Sbjct: 275 --ALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANE 332
Query: 248 ERGITVRDSDYYAFVNVLCKE---HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
RG+ + + Y V+ C++ + E C ++ V G+ + + + C +G
Sbjct: 333 YRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM---VRNGFTGTTLTYNTLLNGFCSRG 389
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYY----------------------------- 335
+ +L +L +G++ + CS+L++ +
Sbjct: 390 AIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTIN 449
Query: 336 ------CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL 389
C NR++ +A L ++++ D TY L+DG K G + A +I M+ L
Sbjct: 450 TVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENL 509
Query: 390 KVVSSSS-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V S F ++ L K+ K EM G P+ TY +I+G+
Sbjct: 510 GFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGW 560
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 175/463 (37%), Gaps = 80/463 (17%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG 108
A AL++ ++ + A+ + M+ GV N F ++ + C+ G+ V LL +
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQAN 331
Query: 109 IYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS-TYSSILDGARRYE 162
Y V YN ++D Y +KG AF+ + M RN G + TY+++L+G
Sbjct: 332 EYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMV--RNGFTGTTLTYNTLLNGFCSRG 389
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
+ + ++ LM+++ ++P ++ GKT A ++K + T
Sbjct: 390 AIDDALKLWFLMLKRGVVPNEISCST--LLDGFFKAGKTEQALNLWKETLARGLARNVVT 447
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK--------------- 267
++ L K R+ EA +++H + E Y ++ CK
Sbjct: 448 INTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEME 507
Query: 268 --------------------EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
Q +V + ++ +G P + +A C +G
Sbjct: 508 NLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLH 567
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYY------------------------CSNRQIDK 343
+ L +++KGL + F CS L+ + CS ++
Sbjct: 568 DACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNI 627
Query: 344 AIALHIKIEKLKGSLDVAT---YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIV 400
HI IE L G + +++++ GL K GR+ +A +F+ +LKV
Sbjct: 628 GKVAHI-IESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFE---DLKVKGFIPDNFT 683
Query: 401 VSRLCH----LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
S L H + A DEML P+ TY +I G
Sbjct: 684 YSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGL 726
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 115/316 (36%), Gaps = 34/316 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G P AL+ ++ + A LY MV G+ PN F S++ R GK
Sbjct: 541 MSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGK 600
Query: 98 FE----VVLGLLDSGIY---------------------------SSVMYNLVIDFYSKKG 126
+ V+ L D+ + + +M+N+VI K G
Sbjct: 601 VDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLG 660
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A + ++ + P TYSS++ G +++ + M+ +L P +
Sbjct: 661 RVADARNLFEDL-KVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPN--IV 717
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +I L A +F + + I T ++ K+G EA ++ +
Sbjct: 718 TYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKM 777
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
+ GI Y ++ LC + EE LL ++E P + + G
Sbjct: 778 IKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNM 837
Query: 307 KEVEELLSAVLDKGLL 322
K + +L + + GLL
Sbjct: 838 KAITKLYNEMHICGLL 853
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 43 FVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK----F 98
P + N+L+ L + + A L+ + G+SPN T++ + C+ G F
Sbjct: 712 LTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAF 771
Query: 99 EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
++ ++ GI +V Y ++I +G A L++M N+ P F TY +++ G
Sbjct: 772 KLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIE-NNVDPNFITYWTLIQG 830
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHF 184
R + ++ M LLP ++
Sbjct: 831 YARCGNMKAITKLYNEMHICGLLPANW 857
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ ++ ++ G P N L+D + A L M+++G+ P FT++++
Sbjct: 735 AVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIH 794
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEM 138
LC G E + LLD I ++V N + I Y++ G+ A NEM
Sbjct: 795 GLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 187/427 (43%), Gaps = 53/427 (12%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
YS G + + +++R M G +P + + N+ +D+L + + A+ ++ +M G PN
Sbjct: 196 YSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPN 255
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
T+ ++ G F ++ ++ GI ++ +++ ++ID Y+K+G A L+
Sbjct: 256 IVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILS 315
Query: 137 EMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
EM G+ L+P TYS+++ R + + ++++G V+ + H L I
Sbjct: 316 EM-QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL------I 368
Query: 193 QKLSDMGK-TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
Q G A E++++ + ++ ++ KEGRV +A I+ L+
Sbjct: 369 QGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLV----- 423
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
+D+ ER I + + + C G+ +
Sbjct: 424 ---------------------------KDIGERSDI---IMFNTLIDGYCLVGEMGKAFS 453
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLF 371
+L A++ G+ D+F ++L+ Y + +ID + L ++ K TY+++LDGLF
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513
Query: 372 KDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEA 430
+ GR A ++ M VS ++ I++ LC +A+ ++ M K +
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573
Query: 431 TYKQVIS 437
T +I+
Sbjct: 574 TLNTMIN 580
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 176/440 (40%), Gaps = 28/440 (6%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V+ + +G +Y M GFVP V N++++AL + + A L MV
Sbjct: 120 NTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVD 179
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SG---IYSSVMYNLVIDFYSKKGDFGA 130
+GV PNK T++ + G++E + +G I V +N +D K G
Sbjct: 180 NGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKE 239
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG---------ARRYEKTEVSDRIVGLMVEKKLLP 181
A + M + P TY +L G + T D IV + +L
Sbjct: 240 AAEIFYSMA-AKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTIL- 297
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
I + G A +I + + T ++ AL + GR+ +A+
Sbjct: 298 ----------IDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVD 347
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI-PCAMELSRFVASQ 300
++ + G+ Y++ + C + L+ +++ G P + V S
Sbjct: 348 KFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSI 407
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C +G+ + + V D G D ++L++ YC ++ KA ++ + D
Sbjct: 408 CKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
TY+ L++G FK GR+++ + +F M + K+ ++ ++ I++ L A K E
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527
Query: 420 MLKMGHKPDEATYKQVISGF 439
M+ G TY ++ G
Sbjct: 528 MIGCGTTVSLPTYNIILKGL 547
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 138/330 (41%), Gaps = 33/330 (10%)
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV--- 191
+N C R G + + +L + +KT + + L K+ +D V
Sbjct: 15 MNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRT--------DDAVKVL 66
Query: 192 IQKLSDMG---KTYAAEMIFKRACDEKIELQ-----------DDTC-------GCMLKAL 230
+++++++G ++ ++ KR CD+ Q + C ++
Sbjct: 67 LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGF 126
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
KEG++ +A +YH + ++G + + +N LCK + LLR +V+ G P
Sbjct: 127 FKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNK 186
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + + G+W+E ++ + +GL+ D +S M+ C + + +A +
Sbjct: 187 VTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYS 246
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ ++ TY +LL G +G + + F+ MK +V++ F I++
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGM 306
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +AM EM G PD TY +IS
Sbjct: 307 MDEAMLILSEMQGQGLSPDVFTYSTLISAL 336
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 178/406 (43%), Gaps = 21/406 (5%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P + +++ R L +G ++R G+ +K + V + LC + + + + +
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 105 L-----------DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL-TPGFSTYS 152
L D+ Y+ V+ L D S++ A D L M + +P TY+
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQ-----ALDLLRMMAKEEGVCSPDVVTYN 120
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++ G + K + + M+++ +P + ++ +I L AE++ ++
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPD--VVTHNSIINALCKARAVDNAELLLRQMV 178
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
D + T M+ S GR +EA +++ ++ RG+ + +F++ LCK + +
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSK 238
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E + + +G+ P + + +G + ++ + + G++ + + L+
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
+ Y +D+A+ + +++ S DV TY L+ L + GR+ +AV F+ M V
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG-HKPDEATYKQVI 436
++ + ++ C +L KA + EM+ G +P+ A + ++
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 149/385 (38%), Gaps = 83/385 (21%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++++D Y+ +G+ + + + M+ G P V + L+ AL R + A + M+
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353
Query: 75 RDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGI-------YSSV---------- 113
GV PN + + Q C G E+V ++++GI ++S+
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413
Query: 114 --------------------MYNLVIDFYSKKGDFGAAFDRL---------------NEM 138
M+N +ID Y G+ G AF L N +
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473
Query: 139 CNG-------------------RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV---E 176
NG + + P TY+ ILDG R +T + +++ M+
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT 533
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
LP + + +++ L T A ++F++ C ++ T M+ ++ R
Sbjct: 534 TVSLPTY-----NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRR 588
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+EA ++ IS+ G+ S Y + L KE EE + + + G PC+ L+
Sbjct: 589 EEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDT 648
Query: 297 VASQCGKGKWKEVEELLSAVLDKGL 321
+ + KG+ + +S V K +
Sbjct: 649 IRTLLEKGEIVKAGNYMSKVDGKSI 673
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 176/420 (41%), Gaps = 49/420 (11%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD 76
++L Y+ +G F D + + M+ G V L+DA ++ + A + M
Sbjct: 261 ILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQ 320
Query: 77 GVSPNKFTWSLVAQILCRSG-------KFEVVLGLLDSGIY-SSVMYNLVIDFYSKKGDF 128
G+SP+ FT+S + LCR G KF ++G +G+ ++V+Y+ +I + GD
Sbjct: 321 GLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG---TGVQPNTVVYHSLIQGFCTHGDL 377
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + + EM N P + ++SI+ + E +++ H
Sbjct: 378 VKAKELVYEMMNNGIPRPNIAFFNSIVHSICK---------------EGRVMDAH----- 417
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
++ + D+G+ + ++F D C++ G + +A + +
Sbjct: 418 -HIFDLVKDIGER-SDIIMFNTLIDGY---------CLV------GEMGKAFSVLDAMIS 460
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
GI Y VN K + ++ L R++ ++ P + + + G+
Sbjct: 461 AGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVA 520
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+++L ++ G + + +++ C N D+AI + K+ + ++ T + +++
Sbjct: 521 AQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMIN 580
Query: 369 GLFKDGRMEEAVRIFDYMKELKVV-SSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
++ R EEA +F + + +V ++S++ I++ L + +A M K G P
Sbjct: 581 SMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 29/378 (7%)
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAF 132
V P+ +T++ + + LC G+ L +LD + V Y ++++ K+ + A
Sbjct: 28 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN---- 188
L+EM + TP TY+ +++G ++ V D I L K LP + N
Sbjct: 88 KLLDEM-RDKGCTPDIVTYNVVVNGI--CQEGRVDDAIEFL----KNLPSYGCEPNTVSY 140
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ V++ L + AE + + T ++ L ++G V+ A+++ I +
Sbjct: 141 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 200
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G T Y ++ CK+ + ++ L +V RG P + + + + C G+
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA----IALHIKIEKLKGSL--DVAT 362
ELL + DKG C L+ Y + KA AL + E + L D+ T
Sbjct: 261 AVELLHQLKDKG------CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 314
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNHDEML 421
Y + GL ++ R+E+A+R F ++++ + ++ + ++ LC +E A+ M+
Sbjct: 315 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 374
Query: 422 KMGHKPDEATYKQVISGF 439
G P+E+TY +I G
Sbjct: 375 GNGCMPNESTYTILIEGL 392
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKF 83
KGL LEV + YG P + N LL A +Q ++ A MV G P+
Sbjct: 184 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 243
Query: 84 TWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEM 138
+++ + LCRSG+ +V + LL D G ++ YN VID +K G A + LNEM
Sbjct: 244 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 303
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ + L P TYS+I G R ++ E + R G + + + P L + +I L
Sbjct: 304 VS-KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY--NAIILGLCKR 360
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
+T++A +F + T +++ L+ EG +KEA
Sbjct: 361 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 163/386 (42%), Gaps = 17/386 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P N L+ L + A + M+R P+ T++++ + C+ ++ + L
Sbjct: 30 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89
Query: 105 LD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LD V YN+V++ ++G A + L + P +Y+ +L G
Sbjct: 90 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL-PSYGCEPNTVSYNIVLKGLC 148
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEK 215
E+ E ++ ++G M +K P + ++ N +I L G A E I K C
Sbjct: 149 TAERWEDAEELMGEMGQKGC-PPNVVTFN-MLISFLCRKGLVEPALEVLEQIPKYGCTPN 206
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
+ +L A K+ ++ +A+ L+ RG Y + LC+ + +
Sbjct: 207 SLSYNP----LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 276 GLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
LL + ++G P + + + GK KE ELL+ ++ KGL D S++
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSS 394
C +I+ AI K++ + + Y+ ++ GL K A+ +F YM + +
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEM 420
S++ I++ L + +++A DE+
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDEL 408
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 145/333 (43%), Gaps = 21/333 (6%)
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN ++ Y G AA + EM + P TY++++ G +T + ++ M
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEM----PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC-------GCML 227
+ ++ +P D V + + + +K+A E++D C ++
Sbjct: 59 LRRRCVP-------DVVTYTI--LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109
Query: 228 KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+ +EGRV +AI+ + G Y + LC + E+ L+ ++ ++G
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 169
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
P + + ++ C KG + E+L + G +S + L+ +C +++DKA+A
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 229
Query: 348 HIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCH 406
+ D+ +Y+ LL L + G ++ AV + +K+ S+ V+ L
Sbjct: 230 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 289
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++A++ +EM+ G +PD TY + +G
Sbjct: 290 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 11/317 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V++ +G D +E + + YG P + N +L L A L G M +
Sbjct: 106 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 165
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGA 130
G PN T++++ LCR G E L +L+ +S+ YN ++ + K+
Sbjct: 166 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 225
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A L+ M + R P +Y+++L R + +V+ ++ + +K P L +
Sbjct: 226 AMAFLDLMVS-RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP--VLISYNT 282
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI L+ GKT A + + ++ T + L +E R+++AI+ + + + G
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y A + LCK + L ++ G +P + + +G KE
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 402
Query: 311 ELLSAVLDKG---LLLD 324
+LL + + +LLD
Sbjct: 403 DLLDELCSRAGEEILLD 419
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 196/462 (42%), Gaps = 31/462 (6%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
I+ C G +DA ++++ Y+ + +E + MM+ + P V N +L + R+
Sbjct: 117 IKRC-GFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKE 175
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYN 116
+ LA +Y M++ PN T+S++ +C+SGK + L + D + + + Y
Sbjct: 176 VVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYT 235
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM-- 174
++I + A+ RL P TY+++L G + K D +GL+
Sbjct: 236 IIISGLCQAQKADVAY-RLFIAMKDHGCIPDSVTYNALLHG---FCKLGRVDEALGLLKY 291
Query: 175 VEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
EK ++ L Y +I L + A++ +++ + I+ M+K LSK
Sbjct: 292 FEKD---RYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSK 348
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
G+ K+A+++ + ++ERG+ Y A + C +E L ++ + A
Sbjct: 349 AGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACT 408
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIE 352
+ + C G + +++ + + G ++L++ +C I+KA L K+E
Sbjct: 409 YTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME 468
Query: 353 KLKGS-------------LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
+ LD A+ +++ L G + +A I + + + ++
Sbjct: 469 IGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYN 528
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
I++ C + A K E+ G PD TY +I+G +
Sbjct: 529 ILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLL 570
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 165/389 (42%), Gaps = 38/389 (9%)
Query: 30 DGLEVY----RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
+G E+Y + ++ GF + A L+ A + + I A + M P+ FT+
Sbjct: 105 NGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTY 164
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
+ V ++ R EVVL L GIY+ ++ N
Sbjct: 165 NTVLHVMVRK---EVVL--LALGIYNRML--------------------------KLNCL 193
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P +T+S ++DG + KT+ + ++ M ++++LP +I L K A
Sbjct: 194 PNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITY--TIIISGLCQAQKADVAY 251
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+F D T +L K GRV EA+ + + + Y ++ L
Sbjct: 252 RLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGL 311
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+ + E+ R + E P + + + GK+K+ LL+ + ++GL+ D+
Sbjct: 312 FRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDT 371
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
C ++L++ YC +D+A +LH++I K TY +L+ G+ + G + +A +IF+
Sbjct: 372 HCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNE 431
Query: 386 MKELKVVSS-SSFVIVVSRLCHLKELRKA 413
M++ S +F ++ C + KA
Sbjct: 432 MEKHGCYPSVVTFNALIDGFCKAGNIEKA 460
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 171/401 (42%), Gaps = 32/401 (7%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++ S G F D L + M G VP NAL+ + A L+ + +
Sbjct: 340 TIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISK 399
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGA 130
+ + T++++ +CRSG ++ + G Y SV+ +N +ID + K G+
Sbjct: 400 NDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEK 459
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A +M GRN P S + + GA R T +V + + L+ K +
Sbjct: 460 AQLLFYKMEIGRN--P--SLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAY-----N 510
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ +L+D G +A +I T ++ K G + A +++ + +G
Sbjct: 511 ILMQLTDSG--FAPNII--------------TYNILIHGFCKAGNINGAFKLFKELQLKG 554
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
++ Y +N L ++ E+ +L +++ G P F+ C + K
Sbjct: 555 LSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAF 614
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L L DS S+ E + ++++A+ ++++ +A Y + L GL
Sbjct: 615 SLWLKYLRSIPGRDSEVLKSVEENF-EKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGL 673
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKEL 410
+ GR+EEA++IF ++E V V+ S V ++ RL + L
Sbjct: 674 CQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNL 714
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 168/425 (39%), Gaps = 66/425 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
VL K + + L +Y M +P ++ + L+D + + + + A ++ M +
Sbjct: 167 VLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRR 226
Query: 78 VSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAF 132
+ PNK T++++ LC++ K + + + + D G I SV YN ++ + K G A
Sbjct: 227 ILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEAL 286
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
L R + YS ++DG ARR+E +V R M E + P L
Sbjct: 287 GLLKYFEKDRYVLDK-QGYSCLIDGLFRARRFEDAQVWYR---KMTEHNIKPDVILY--T 340
Query: 190 YVIQKLSDMGK-------------------TYAAEMIFKRACDE---------KIELQDD 221
+++ LS GK T+ + K CD +E+ +
Sbjct: 341 IMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKN 400
Query: 222 TC---GC----MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
C C ++ + + G V +A QI++ + + G + A ++ CK E+
Sbjct: 401 DCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKA 460
Query: 275 CGLLRDVVERGYIPC--------------AMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
LL +E G P L V C G + +L + D G
Sbjct: 461 -QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSG 519
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEA 379
+ + L+ +C I+ A L +++ LKG S D TY L++GL R E+A
Sbjct: 520 FAPNIITYNILIHGFCKAGNINGAFKLFKELQ-LKGLSPDSVTYGTLINGLLSANREEDA 578
Query: 380 VRIFD 384
+ D
Sbjct: 579 FTVLD 583
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 181/418 (43%), Gaps = 44/418 (10%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ + + + M + G P++ + L++ + A + G +++ G N T +
Sbjct: 94 YPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTT 153
Query: 88 VAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
+ + LC +G+ L DS + V Y +I+ K G AF+ L++M G+
Sbjct: 154 IMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM-EGQ 212
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ P Y+ I+DG + GL+ E + L SD
Sbjct: 213 VVRPNVVIYNMIVDGLCKD----------GLVTEARDL--------------YSD----- 243
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
+ R D + T C++ G+ +E ++ + +R + + Y +
Sbjct: 244 ----VVGRGIDPDVF----TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ LCK+ + + ++ERG P + + ++ C E +L + G+
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
D + + L+ YC N +ID+A++L K+ K + ++ TY L+DGL K GR+ A +
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415
Query: 383 FDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
F + + + ++ I++ LC ++ + KA++ + M + G P+ ++Y +I+G+
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGY 473
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 147/352 (41%), Gaps = 8/352 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
GL + E+ M P V N ++D L + + A LY +V G+ P+ FT+
Sbjct: 197 GLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTY 256
Query: 86 SLVAQILCRSGKFEVVLGLL----DSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + C G++ V LL D + +V YN++ID KKG G A D N M
Sbjct: 257 TCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE 316
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
R P T+++++ G Y + ++ E + P + S N +I + +
Sbjct: 317 -RGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVW-SYNILIIGYCKN-NR 373
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +F + +K+ T ++ L K GR+ A +++ I + G + Y
Sbjct: 374 IDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNI 433
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ LCK ++ L + ERG P + + C + E L + +
Sbjct: 434 MLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L+ DS + L++ C + +I A L + +DV TY++L D K
Sbjct: 494 LVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 191/440 (43%), Gaps = 25/440 (5%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS++++CY H G V M+ G+ ++ L E+R A + ++
Sbjct: 115 TLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSV 174
Query: 74 VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
V G ++ T+ + LC+ G FE++ + + + V+YN+++D K G
Sbjct: 175 VAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLV 234
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A D +++ GR + P TY+ ++ G + R++ MV++ ++ N
Sbjct: 235 TEARDLYSDVV-GRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN------VNLN 287
Query: 189 DYVIQKLSD-------MGKTY-AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
Y L D +GK + ++ +R ++ +L T ++ V EA
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERG--QRPDLV--TFNTLMSGYCLYNDVVEAR 343
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+++ +E GIT Y + CK ++ +E L + + P + S +
Sbjct: 344 KLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ EL SA+ D G + + +++ C + +DKAI L + + + +V
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV 463
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDE 419
++Y++L++G K R++EA+ +F+ M +V S ++ ++ LC + A + +
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNV 523
Query: 420 MLKMGHKPDEATYKQVISGF 439
M G D TY + F
Sbjct: 524 MHDGGPPVDVITYNILFDAF 543
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 170/445 (38%), Gaps = 80/445 (17%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL---- 92
MM YG +P + N L+ L + A L M + G+ P+ T+ +VA+
Sbjct: 210 MMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLG 269
Query: 93 --------------------------------CRSGKFEVVL----GLLDSGI-YSSVMY 115
C+ G E L LL SG + ++Y
Sbjct: 270 LMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILY 329
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
++++ K+G A L EM NL P TYS ++ G + K + + ++ M
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEM-EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
++ P F + +++ L + G A M F + M+ K G
Sbjct: 389 FNRIFPNSF--AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGD 446
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V+EA+++Y + ++ IT P + +
Sbjct: 447 VEEAVRLYKRLRDKAIT-----------------------------------PSIVTFNS 471
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
+ C K E LL ++ GL + ++LM YC I+K L +++
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAM 414
V TY V++ GL K ++EE+V++ + M+ + ++ ++ C K++RKA
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ D+ML +P ATY +I G
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLIDGL 616
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 174/430 (40%), Gaps = 44/430 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++L +G + L++ M P + + L+ L +Q +++ A LY M
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCF 389
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGA 130
+ + PN F S + + LC G DS I S++ +YN++ID Y K GD
Sbjct: 390 NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEE 449
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A RL + + +TP T++S++ G + K ++ ++LL L G
Sbjct: 450 AV-RLYKRLRDKAITPSIVTFNSLIYGFCKNRK---------VVEARRLLESIKLHG--- 496
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
L TY ++ A +EG + + ++ ++ +
Sbjct: 497 ----LEPSAVTYTT---------------------LMNAYCEEGNINKLHELLLEMNLKD 531
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + LCK+ + EE LL D+ +G P + + + C ++
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
ELL +L L + L++ C ++ A + + ++ +L Y ++
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAH 651
Query: 371 FKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
G + AV++F M E VS + V++RLC + +A ML G PD+
Sbjct: 652 CVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQ 711
Query: 430 ATYKQVISGF 439
++ +++ F
Sbjct: 712 EIFEMMLNAF 721
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 165/405 (40%), Gaps = 61/405 (15%)
Query: 77 GVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
G ++ + LV+ +L R +F+ + +LD + V +V D A L
Sbjct: 58 GFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVASRMVHD----------ALFVLV 107
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYE------------KTEVSDRIVGLMVEKKLLPKHF 184
+M +NL P TY+S+L R + T S R ++V+ F
Sbjct: 108 KM-KEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRF 166
Query: 185 LSGNDYVIQKLSDMGKTYAAEM-----IFKRACDEKIELQD----------------DTC 223
D V+ + GK +A + I R C K+ L D DT
Sbjct: 167 ---RDAVLFLRQNDGKEFAPSVVSFNTIMSRYC--KLGLADVAKSFFCMMLKYGILPDTY 221
Query: 224 --GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
++ L G ++EA+++ + + ++G+ Y ++ K + R++
Sbjct: 222 SYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTY----KIVAKGFHLLGLMSGAREI 277
Query: 282 VER-----GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+++ G P + + + C G +E L +L G L+ S L+ C
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS- 395
Q+D+A+ L ++E D+ TY +L+ GL K G++++A++++ M ++ +S
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ LC L A D ++ +PD Y +I G++
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 119/323 (36%), Gaps = 76/323 (23%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G + + + +++ Y +G E+ M + P V ++ L +Q ++
Sbjct: 495 HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEE 554
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
+ L M G++P++ T++ + Q C K
Sbjct: 555 SVQLLEDMRAKGLAPDQITYNTIIQCFC------------------------------KA 584
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
D AF+ L++M NL P +TY+ ++DG RY E +DR++ +
Sbjct: 585 KDMRKAFELLDDML-IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQ---------- 633
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
D I L M+KA +G + A++++H
Sbjct: 634 ---------------------------DRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQ 666
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEV----CGLLRDVVERGYIPCAMELSRFVASQC 301
+ E+G V DY A +N LCK E C +L D V M L+ F +
Sbjct: 667 MVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRA-- 724
Query: 302 GKGKWKEVEELLSAVLDKGLLLD 324
G V ELL+ ++ GLL D
Sbjct: 725 --GHVHSVFELLAVMIKFGLLHD 745
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 179/424 (42%), Gaps = 11/424 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S V+D + +G + + M G V + + ++ A + + A L M
Sbjct: 295 STVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQE 354
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
+GV+P+ T+S + G++E +GLL + +++ Y +VI +K+G +
Sbjct: 355 NGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWRE 414
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A D L EM + P YS+ +D + + E + ++ M L P + +S N
Sbjct: 415 AIDLLQEM-QAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP-NVISYNS- 471
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I + G++ A + + + T ++ + + + +EA+ ++ + +G
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQG 531
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG-KWKEV 309
IT +N + EE +L ++ G +P A+ R C KG +WKE+
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISY-RTAIDACAKGDRWKEI 590
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+LL + GL D+ M + +A+ L + + S DV TY+ ++
Sbjct: 591 IDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINA 650
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K GR +EA + M + +SF + + + A++ EM +G P+
Sbjct: 651 CAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPN 710
Query: 429 EATY 432
EATY
Sbjct: 711 EATY 714
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 177/412 (42%), Gaps = 9/412 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+E+ M G P V ++ + A + + + A L +M GV PN +S
Sbjct: 206 VELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISA 265
Query: 92 LCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
+ G++E + LL G+ V+ Y+ VID +K+G + AF L EM + +
Sbjct: 266 CRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPT-KGVVA 324
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TYS ++ ++ + E + ++ M E + P + I + G+ A
Sbjct: 325 NIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS--TISACAKKGQWEEAVG 382
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + E + + G ++ A +K GR +EAI + + G+ +Y A ++
Sbjct: 383 LLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACA 442
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ + E+ LLR++ G P + + + + G+ K ELL + GL D
Sbjct: 443 QASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVI 502
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
S+++ RQ ++A+ L ++++ + DV + + ++ + G EEA+ + M
Sbjct: 503 TYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEM 562
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ +V + S+ + ++ + EM +G PD +Y+ +S
Sbjct: 563 PTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 169/409 (41%), Gaps = 44/409 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L+V M+ G P ++ + A + A L +M G P+ T+
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224
Query: 86 SLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
S + +++ +GLL S G+ +V+ Y+ I K G + A D L EM
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM-P 283
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
L P TYS+++D + + E + R++ M K ++
Sbjct: 284 AVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVV-------------------- 323
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A +I T ++ A +K G+ +EA+ + + E G+ Y +
Sbjct: 324 ---ANII--------------TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ K+ Q EE GLLR++ G P A+ +++ +G+W+E +LL + G
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D S+ ++ + ++A+ L ++ + +V +Y+ +D K GR + AV
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
+ M + ++ V++ ++ +A+ EM + G PD
Sbjct: 487 ELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPD 535
>gi|413951894|gb|AFW84543.1| hypothetical protein ZEAMMB73_135692 [Zea mays]
Length = 575
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 190/454 (41%), Gaps = 58/454 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY--- 70
++++D Y+ G YR M+ G VP N + R ++ R A+ L
Sbjct: 22 TFNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCTFNIIAA---RAHKFRYAAQLVHDH 78
Query: 71 ----GAMVRDGVSPNKFTWSLVAQILCR-------SGKFEVVLGLLDSGIYSSVM-YNLV 118
M DG+ ++CR +E+ LG ++ G+ V +N +
Sbjct: 79 DMFSSHMSADGLD----------MLVCRLCWDHRLDDAWELRLGAIEQGVPLRVTGFNAL 128
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I Y+K+G A L + N LTP ST++ ++ G + + + ++ MV K
Sbjct: 129 IAAYNKEGLHEEA-SELYRIINKLGLTPSSSTFNYLIMGLCNQVRLDEAQLLLEHMVSKG 187
Query: 179 L---------LPKHFLSGNDY-VIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCM 226
L +F GN ++ DMGK I+LQ D
Sbjct: 188 YCLSTSFTICLDAYFRDGNAVGALKCWDDMGK---------------IDLQTDFIAFSAY 232
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ S+ V EA Q + ++ RGI + Y + ++ LCK E L +++ + G
Sbjct: 233 INGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAFKLEQNMRQSGL 292
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + + C +GK K V+ LL + GL D+ ++++ YC + ++ A+
Sbjct: 293 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMN 352
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
K+ D+ TY++ + L+++ + +A ++ D + + +S ++ ++ +C
Sbjct: 353 FMNKMLVAGCEPDIFTYNIWMHSLYRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC 412
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +AM ++KM KP+ T +S F
Sbjct: 413 S-DVLDRAMILTGRLIKMAFKPNTITLNVFLSHF 445
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 153/359 (42%), Gaps = 43/359 (11%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+++ +N++ID Y+K G A EM R L P T++ I A R K + ++
Sbjct: 19 NTITFNVLIDGYAKSGQMHQASAAYREM-QARGLVPDSCTFNII---AARAHKFRYAAQL 74
Query: 171 VGLMVEKKLLPKHFLS-GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
V + + H + G D ++ +L + A + A ++ + L+ ++ A
Sbjct: 75 VH---DHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELRLGAIEQGVPLRVTGFNALIAA 131
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY--- 286
+KEG +EA ++Y +I++ G+T S + + LC + + +E LL +V +GY
Sbjct: 132 YNKEGLHEEASELYRIINKLGLTPSSSTFNYLIMGLCNQVRLDEAQLLLEHMVSKGYCLS 191
Query: 287 ----------------------------IPCAMELSRFVASQCGKGKWKEVEELLSA--- 315
I + F A G+ + V E A
Sbjct: 192 TSFTICLDAYFRDGNAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLDYVNEAYQAFAE 251
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ +G++ ++ +S++ C + +A L + + D+ T ++L+DGL ++G+
Sbjct: 252 MTSRGIVPNNITYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGK 311
Query: 376 MEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++ + D + ++ +++ C +++ AM ++ML G +PD TY
Sbjct: 312 LKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYN 370
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 44/274 (16%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT----------- 252
A +F + I++ T ++ +K G++ +A Y + RG+
Sbjct: 4 ARRLFDQMAQVGIQVNTITFNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCTFNIIAA 63
Query: 253 -----------VRDSDYYA----------FVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
V D D ++ V LC +H+ ++ L +E+G
Sbjct: 64 RAHKFRYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELRLGAIEQGVPLRVT 123
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ +A+ +G +E EL + GL S + L+ C+ ++D+A + +
Sbjct: 124 GFNALIAAYNKEGLHEEASELYRIINKLGLTPSSSTFNYLIMGLCNQVRLDEA---QLLL 180
Query: 352 EKL--KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLC 405
E + KG ++ + LD F+DG A++ +D M ++ + ++ S+++ SRL
Sbjct: 181 EHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLD 240
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ E +A EM G P+ TY +IS
Sbjct: 241 YVNEAYQAFA---EMTSRGIVPNNITYNSIISAL 271
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 9 DSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
D Q+D A S ++ S + + + M G VP N+++ AL + + A
Sbjct: 221 DLQTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEA 280
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDF 121
L M + G+ P+ +T +++ LCR GK ++V LL +G+ +V YN +I+
Sbjct: 281 FKLEQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINA 340
Query: 122 YSKKGDFGAAFDRLNEM 138
Y + D +A + +N+M
Sbjct: 341 YCRAQDMNSAMNFMNKM 357
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S + ++ LD Y G + L+ + M A +A ++ R + + A +
Sbjct: 191 STSFTICLDAYFRDGNAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLDYVNEAYQAFA 250
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG----IYSSVMYNLVIDFYS 123
M G+ PN T++ + LC++G F++ + SG IY+S N++ID
Sbjct: 251 EMTSRGIVPNNITYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTS---NILIDGLC 307
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++G + L +MC+ LTP TY++I++ R + + + M+ P
Sbjct: 308 REGKLKMVDNLLLDMCSN-GLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDI 366
Query: 184 F 184
F
Sbjct: 367 F 367
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 182/427 (42%), Gaps = 10/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++ C +G + + L V M G P + N + A R + A + M
Sbjct: 255 SVITGC-GKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMES 313
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGA 130
GV+P+ ++ + G++E + LLD G+ +++ +N I K G +
Sbjct: 314 QGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEK 373
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + L E+ LTP ++++S + + + + + ++ M K+L P +
Sbjct: 374 AVELLREV-TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI--SYNS 430
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
I+ G+ A + ++ + + + ++A + GR +E +++ + +G
Sbjct: 431 AIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG 490
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+T Y + + K Q E+ LL + E P ++ + +A+ +G+WKE
Sbjct: 491 LTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV 550
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LL + +GL D ++ ++ Y N Q ++A+ L ++ + +V TY+ ++
Sbjct: 551 ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKAC 610
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+ G E+A+ + +KE V S+ + +S +A+ EM G PD
Sbjct: 611 GRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDV 670
Query: 430 ATYKQVI 436
+Y I
Sbjct: 671 ISYTSAI 677
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 191/442 (43%), Gaps = 15/442 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G ++ + ++ + G + + +EV R M G P V + +A + A +
Sbjct: 277 SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQW 336
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLV 118
+ L M GV+PN ++ + G++E + LL G+ + +N
Sbjct: 337 ETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSA 396
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I +K G + A + L EM + L P +Y+S ++ + + E++ + M K
Sbjct: 397 IAACTKSGRWKEALELLKEM-PAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG 455
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
L P + +S N I+ + G+ + ++ + + T +K K G+ ++
Sbjct: 456 LTP-NVISSN-IAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEK 513
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A+ + + E +T Y + + K + +E LLR++ +G P + + +
Sbjct: 514 ALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAID 573
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+ G+W+ ELL + KGL + +S+++ + +KA+ L ++++ +
Sbjct: 574 AYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAP 633
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVS---RLCHLK-ELRKAM 414
D+ +Y++ + K GR EEA D ++E+ + VI + R C+ + E KA+
Sbjct: 634 DLMSYNLAISACGKRGRWEEA---LDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKAL 690
Query: 415 KNHDEMLKMGHKPDEATYKQVI 436
+ M G P +Y I
Sbjct: 691 GLLNLMGAHGVSPTATSYSLAI 712
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 188/454 (41%), Gaps = 43/454 (9%)
Query: 24 HKGLFMDGLEVYR-MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
+G + LE+ R + G P V N+ ++A ++ +A L M V P++
Sbjct: 156 RQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDE 215
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDS----GIYS-SVMYNLVIDFYSKKGDFGAAFDRLNE 137
+++ + R G++E V+GLL G+ ++ YN VI K+G + A L E
Sbjct: 216 ISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTE 275
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP---------KHFLSGN 188
M + + LTP +Y+ + R + + + ++ M + + P K G
Sbjct: 276 M-SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGG 334
Query: 189 DY--VIQKLSDM-GKTYAAEMI-FKRA---------CDEKIEL----------QDDTC-G 224
+ + L +M G+ A I F A ++ +EL D T
Sbjct: 335 QWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFN 394
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
+ A +K GR KEA+++ + + + Y + + K Q E L R + +
Sbjct: 395 SAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTK 454
Query: 285 GYIPCAMELSRFVASQCG-KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
G P + S CG +G+W+E ELL + +GL + +S ++ Q +K
Sbjct: 455 GLTPNVIS-SNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEK 513
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A+ L K+++L + D TY+ + K GR +EAV + M + S+ +
Sbjct: 514 ALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAID 573
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ +A++ +M G P+ TY VI
Sbjct: 574 AYGKNGQWERAVELLRQMPTKGLTPNVITYNSVI 607
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 157/370 (42%), Gaps = 11/370 (2%)
Query: 75 RDGVSPNKFTWSLVAQILCRSG-KFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDF 128
++GVSPN F ++ + C SG ++E+ + LL + + YN I + G +
Sbjct: 173 QEGVSPNVFCYNSAIEA-CGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQW 231
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
L EM + LTP TY+S++ G + + + + ++ M K L P+
Sbjct: 232 ERVIGLLREMPS-VGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI--SY 288
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ I+ G+ A + ++ + + + +KA G+ + ++ + ++
Sbjct: 289 NMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAG 348
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
RG+ + + + K Q E+ LLR+V G P A + +A+ G+WKE
Sbjct: 349 RGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKE 408
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
ELL + K L D+ +S +E Q + A+ L ++ + +V + ++ +
Sbjct: 409 ALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIR 468
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
+ GR +E + + M + + ++ + + KA+ +M ++ P
Sbjct: 469 ACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTP 528
Query: 428 DEATYKQVIS 437
D TY I+
Sbjct: 529 DSITYNSAIA 538
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 19/309 (6%)
Query: 11 QSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+ DA+S ++ G + LE+ R M G P V + N + A + +
Sbjct: 422 KPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLE 481
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYS 123
L M G++PN T++ + + G++E L LL + S+ YN I S
Sbjct: 482 LLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACS 541
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
K+G + A L EM G+ LTP +Y++ +D Y K +R V L+ + +P
Sbjct: 542 KRGRWKEAVALLREM-PGQGLTPDVISYTAAIDA---YGKNGQWERAVELL---RQMPTK 594
Query: 184 FLSGN----DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
L+ N + VI+ G+ A + K + + + + A K GR +EA
Sbjct: 595 GLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEA 654
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + G+T Y + + E + E+ GLL + G P A S + +
Sbjct: 655 LDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA 714
Query: 300 QCGKGKWKE 308
CGKG +E
Sbjct: 715 -CGKGGRRE 722
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 131/302 (43%), Gaps = 8/302 (2%)
Query: 95 SGKFEVVLGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
+GK+ LG+LD G+ + Y I ++G + A + L E+ ++P
Sbjct: 123 TGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+S ++ ++ E++ ++ M +++++P + I+ G+ + +
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVVPDEI--SYNSAIKACGRGGQWERVIGLLRE 240
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ T ++ KEG+ KEA+ + +S +G+T Y + + +
Sbjct: 241 MPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGR 300
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+E +LR + +G P + + + G G+W+ +LL + +G+ ++ +S
Sbjct: 301 WKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNS 360
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM--KE 388
+ Q +KA+ L ++ L + D +++ + K GR +EA+ + M K
Sbjct: 361 AIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR 420
Query: 389 LK 390
LK
Sbjct: 421 LK 422
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 169/382 (44%), Gaps = 10/382 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE MR G P V N L+ L + A + G M+++G P+K ++ V
Sbjct: 183 ALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMS 242
Query: 91 ILCRSGKFEVVLGLL-----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ + E V GLL D+G++ V YN++I +K G A + L E G+
Sbjct: 243 FLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE-SEGKRF 301
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
YS+I+ + + IVG M+ K P + V+ +G+ A
Sbjct: 302 RVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPD--VVTYSTVVDGFCRIGELDQA 359
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ K + T +L L K G+ EA ++ + E T D Y ++
Sbjct: 360 RKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHG 419
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
+E + +E C ++ ++++G+ P +E++ + + C GK E ++ + KG ++
Sbjct: 420 FRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTIN 479
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++++ + ++ A++L + DV TY V++D L K GR++EA + +
Sbjct: 480 VVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVE 539
Query: 385 YMKELKVVSSS-SFVIVVSRLC 405
M ++ + ++ V+ R C
Sbjct: 540 KMLNRGLLPTPVTYRTVIHRYC 561
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 8/219 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ + S+ G+++ A+++ HL+ + G S VNVL + ++ + G
Sbjct: 135 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 194
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + CG + + E++ +L G D ++M + C +++++
Sbjct: 195 VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVR 254
Query: 346 ALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELK----VVSSSSFVIV 400
L ++ G D TY+VL+ GL K G +EA ++++E + V + +
Sbjct: 255 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEA---LEFLRESEGKRFRVDEVGYSAI 311
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V C + +A + EM+ G +PD TY V+ GF
Sbjct: 312 VHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 350
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T C++K L RV +A+++ ++ + G YY ++ LCKE + EEV GLL+ +
Sbjct: 201 TYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRM 260
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
D GL D + L+ +
Sbjct: 261 RN----------------------------------DAGLFPDQVTYNVLIHGLAKHGHA 286
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMK----ELKVVSSSSF 397
D+A+ + E + +D Y ++ +GRM EA I M + VV+ S+
Sbjct: 287 DEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYST- 345
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
VV C + EL +A K M K KP+ T+ +++G
Sbjct: 346 --VVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGL 385
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 203/478 (42%), Gaps = 50/478 (10%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG SD+L+L+LD F + V+ + F P+ + A + +++
Sbjct: 511 EGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 570
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVID 120
L+ M D +SP F ++++ LC+ + + L D + S + YN +ID
Sbjct: 571 GLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLID 630
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
Y K G+ +F ++ E N+ P T++++L G + E ++ ++ M ++ +
Sbjct: 631 GYCKDGNPEKSF-KVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFV 689
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P F + S K AA +++ A D +++ TC +L AL KEG++++A
Sbjct: 690 PDAFTFS--ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAE 747
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKE-----------------HQPEEVCG--LLRDV 281
+I +G+ + Y ++ ++ +P+ + L+R
Sbjct: 748 EILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807
Query: 282 VE----------------RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
E +G P + + K ++ + +LL + D G + +
Sbjct: 808 CELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNV 867
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+L+ C ++ +A + +E S +V Y++L+DG G++E+A R +
Sbjct: 868 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEE 927
Query: 386 M----KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
M EL +V+ ++ + +S L E + E+ + G KPD TY +ISG+
Sbjct: 928 MFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLL---EISRKGLKPDVFTYNSLISGY 982
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 175/419 (41%), Gaps = 17/419 (4%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ +++ +R G P+ + LLD L + + R+ ++ ++ P+KF +
Sbjct: 500 EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 559
Query: 90 QI---LCRSGK-FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
Q L GK E+ + I +V +YN++ID K A +EM R L
Sbjct: 560 QAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML-ARRL 618
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P TY++++DG + E S ++ M + P L + +++ L G A
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPS--LITFNTLLKGLFKAGMVEDA 676
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
E + D+ T + S + A+ +Y + G+ + +N
Sbjct: 677 ENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNA 736
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
LCKE Q E+ +L + +G +P + + + KG + A+ +G+ D
Sbjct: 737 LCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPD 796
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF 383
+ L+ +C ++ A + KLKG S V TY++L+ G GR E + F
Sbjct: 797 HLAYNCLIRTFCELGDMENA-EQEVNKMKLKGVSPSVETYNILIGGY---GRKYEFDKCF 852
Query: 384 DYMKELK----VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
D +KE++ + + S+ +++ LC +L +A +M G P+ Y +I G
Sbjct: 853 DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 172/422 (40%), Gaps = 51/422 (12%)
Query: 25 KGLFMDGL-----EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVS 79
KGLF G+ V M+ GFVP + L D ++ A +Y V G+
Sbjct: 665 KGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLK 724
Query: 80 PNKFTWSLVAQILCRSG---KFEVVLG--LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
N +T S++ LC+ G K E +LG + + + V+YN +ID YS+KGD A +
Sbjct: 725 MNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMK 784
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
++ M + + P Y+ ++ E +++ V M K + P S Y I
Sbjct: 785 IDAM-EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSP----SVETYNIL- 838
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
+ G+ Y + D C +LK + G + +
Sbjct: 839 IGGYGRKY----------------EFDKCFDLLKEMEDNGTMPNVVS------------- 869
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y +N LCK + E + RD+ +RG P + + C KGK ++
Sbjct: 870 ---YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSE 926
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ KG+ L+ ++L++ N ++ +A + ++I + DV TY+ L+ G G
Sbjct: 927 EMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAG 986
Query: 375 RMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 434
++ + +++ MK + + ++ LC + + K E M +PD Y
Sbjct: 987 NVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGE---MSLQPDLLVYNG 1043
Query: 435 VI 436
V+
Sbjct: 1044 VL 1045
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 166/395 (42%), Gaps = 47/395 (11%)
Query: 53 LLDALYRQNE-IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV----LGLLDS 107
LL L +++ I A+ L+ A+ +G+ P+ + +L+ L ++ +F V L +L+S
Sbjct: 487 LLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 546
Query: 108 GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEV 166
S MY I K D G + N M + R ++P Y+ ++DG + + +
Sbjct: 547 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR-ISPTVFIYNVLIDGLCKVRQMKD 605
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCM 226
++++ M+ ++LLP L + +I G + + +R + IE T +
Sbjct: 606 AEQLFDEMLARRLLPS--LITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTL 663
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
LK L K G V++A + L ++ ++G+
Sbjct: 664 LKGLFKAGMVEDAENV-----------------------------------LTEMKDQGF 688
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P A S K + +D GL ++++ CS L+ C QI+KA
Sbjct: 689 VPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEE 748
Query: 347 LHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRL 404
+ + E KG + + Y+ ++DG + G + A D M++ + ++ ++
Sbjct: 749 I-LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L ++ A + ++M G P TY +I G+
Sbjct: 808 CELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY 842
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 86/446 (19%), Positives = 164/446 (36%), Gaps = 72/446 (16%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++L+ +G E+ G VP N ++D R+ ++ A AM +
Sbjct: 731 SILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEK 790
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGA 130
G+ P+ ++ + + C G E ++ G+ SV YN++I Y +K +F
Sbjct: 791 QGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 850
Query: 131 AFDRLNEM-------------------CNG---------------RNLTPGFSTYSSILD 156
FD L EM C G R ++P Y+ ++D
Sbjct: 851 CFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLID 910
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G K E + R M +K + + L + +I LS GK AE + + +
Sbjct: 911 GCCSKGKIEDAFRFSEEMFKKGI--ELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGL 968
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH------- 269
+ T ++ G V+ I +Y + GI Y+ +++ KE
Sbjct: 969 KPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKI 1028
Query: 270 ------QPE------------------EVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
QP+ + L + ++E+ + + Q GK
Sbjct: 1029 FGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 1088
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
EV L+ + + + ++ +++ +C + A + ++++ LDV D
Sbjct: 1089 LCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDE 1148
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKV 391
L+ GL ++ R +EA + M K+
Sbjct: 1149 LVSGLKEEWRSKEAENVISEMNGRKL 1174
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++++ Y K F ++ + M G +P V + L++ L + +++
Sbjct: 826 KGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGI-YSSVMYNLVID 120
A + M GVSPN ++++ C GK E + GI + V YN +ID
Sbjct: 886 AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
S G A D L E+ + L P TY+S++ G R
Sbjct: 946 GLSMNGKLAEAEDMLLEISR-KGLKPDVFTYNSLISGYR 983
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 182/404 (45%), Gaps = 10/404 (2%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE-- 99
G P+ + N L++A ++ +++ A M G+ PN+ T++ V C +G+ +
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414
Query: 100 --VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
V +++ G+ +V YN +I+ Y +KG F F+ L+EM + + P +Y S+++
Sbjct: 415 ETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEM-DKAGIKPNVISYGSLIN 473
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ K ++ ++ M+ + + P + + +I+ + K A F I
Sbjct: 474 CLCKDRKLIDAEIVLADMIGRGVSPNAEIY--NMLIEASCSLSKLKDAFRFFDEMIQSGI 531
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ T ++ L + GRVK+A ++ ++ +G Y + ++ K ++
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + G P + + C K ++++ +L L+ D F + ++ Y
Sbjct: 592 LYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
+ + KA++LH ++ D TY+ L+ +D R+ E + D MK +V
Sbjct: 651 EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVD 710
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ I++ LC LK+ A + EM++ G + + Q+ISG
Sbjct: 711 TYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGL 754
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 181/474 (38%), Gaps = 65/474 (13%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G E+ + M G P+V A N +L L + I+ A L+ M++ + PN T++ +
Sbjct: 176 GFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLID 235
Query: 91 ILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ G E LG + +V YN +++ G A + L EM L
Sbjct: 236 GYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP 295
Query: 146 PGF---------------------------STYSSILDGARRYEKTEVSDRIVGLMVEKK 178
GF TY +L+G R + E ++ ++ +VE
Sbjct: 296 GGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENG 355
Query: 179 LLPKHF-----------------------------LSGN----DYVIQKLSDMGKTYAAE 205
+ P L N + VI K + G+ AE
Sbjct: 356 VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+R ++ + +T ++ ++G + + + GI Y + +N L
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCL 475
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
CK+ + + +L D++ RG P A + + + C K K+ ++ G+
Sbjct: 476 CKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATL 535
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L+ N ++ KA L +++ + DV TY+ L+ G K ++ + ++D
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
MK L + + + C + + K EML+M PD+ Y ++I +
Sbjct: 596 MKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSY 649
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/446 (19%), Positives = 171/446 (38%), Gaps = 78/446 (17%)
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYS-SVMYNLVID 120
A+ LY M +DG P+ + + + + L S FE L ++DSG +V Y +
Sbjct: 106 ATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQ 165
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
D F+ + M + P Y+ +L G + + + + ++ M+++ ++
Sbjct: 166 AAVMLKDLDKGFELMKSMVKD-GMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + +I +G A +R ++ +E T +L L GRV +A
Sbjct: 225 PNTVTY--NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282
Query: 241 QIY----------------------------HLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ L + I + + Y +N LC+ + E
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIE 342
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ +L +VE G P + + V + C +G K+ + ++GL + ++++
Sbjct: 343 KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL--- 389
+C ++D A ++ + S V TY+ L++G + G VR F+++ E+
Sbjct: 403 SKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF---VRCFEFLDEMDKA 459
Query: 390 ----KVVSSSSFV--------------------------------IVVSRLCHLKELRKA 413
V+S S + +++ C L +L+ A
Sbjct: 460 GIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDA 519
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
+ DEM++ G TY +I+G
Sbjct: 520 FRFFDEMIQSGIDATLVTYNTLINGL 545
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+E L + + G++P ++R + + +++ + + V+D G D+
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKA 163
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ + +DK L + K V Y+++L GL K R+++A ++FD M + +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNM 223
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V ++ ++ ++ C + + +A+ + M + + + TY +++G
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGL 272
>gi|413926925|gb|AFW66857.1| hypothetical protein ZEAMMB73_570381 [Zea mays]
Length = 487
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 190/454 (41%), Gaps = 58/454 (12%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY--- 70
++++D Y+ G YR M+ G VP N + R ++ R A+ L
Sbjct: 22 TFNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCTFNIIA---ARAHKFRYAAQLVHDH 78
Query: 71 ----GAMVRDGVSPNKFTWSLVAQILCR-------SGKFEVVLGLLDSGIYSSVM-YNLV 118
M DG+ ++CR +E+ LG ++ G+ V +N +
Sbjct: 79 DMFSSHMSADGLD----------MLVCRLCWDHRLDDAWELRLGAIEQGVPLRVTGFNAL 128
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I Y+K+G A L + N LTP ST++ ++ G + + + ++ MV K
Sbjct: 129 IAAYNKEGLHEEA-SELYRIINKLGLTPSSSTFNYLIMGLCNQVRLDEAQLLLEHMVSKG 187
Query: 179 L---------LPKHFLSGNDY-VIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCM 226
L +F GN ++ DMGK I+LQ D
Sbjct: 188 YCLSTSFTICLDAYFRDGNAVGALKCWDDMGK---------------IDLQTDFIAFSAY 232
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ S+ V EA Q + ++ RGI + Y + ++ LCK E L +++ + G
Sbjct: 233 INGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAFKLEQNMRQSGL 292
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+P + + C +GK K V+ LL + GL D+ ++++ YC + ++ A+
Sbjct: 293 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMN 352
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
K+ D+ TY++ + L+++ + +A ++ D + + +S ++ ++ +C
Sbjct: 353 FMNKMLVAGCEPDIFTYNIWMHSLYRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC 412
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L +AM ++KM KP+ T +S F
Sbjct: 413 S-DVLDRAMILTGRLIKMAFKPNTITLNVFLSHF 445
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 153/359 (42%), Gaps = 43/359 (11%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+++ +N++ID Y+K G A EM R L P T++ I A R K + ++
Sbjct: 19 NTITFNVLIDGYAKSGQMHQASAAYREM-QARGLVPDSCTFNII---AARAHKFRYAAQL 74
Query: 171 VGLMVEKKLLPKHFLS-GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKA 229
V + + H + G D ++ +L + A + A ++ + L+ ++ A
Sbjct: 75 VH---DHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELRLGAIEQGVPLRVTGFNALIAA 131
Query: 230 LSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY--- 286
+KEG +EA ++Y +I++ G+T S + + LC + + +E LL +V +GY
Sbjct: 132 YNKEGLHEEASELYRIINKLGLTPSSSTFNYLIMGLCNQVRLDEAQLLLEHMVSKGYCLS 191
Query: 287 ----------------------------IPCAMELSRFVASQCGKGKWKEVEELLSA--- 315
I + F A G+ + V E A
Sbjct: 192 TSFTICLDAYFRDGNAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLDYVNEAYQAFAE 251
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ +G++ ++ +S++ C + +A L + + D+ T ++L+DGL ++G+
Sbjct: 252 MTSRGIVPNNITYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGK 311
Query: 376 MEEAVR-IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++ + D + ++ +++ C +++ AM ++ML G +PD TY
Sbjct: 312 LKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYN 370
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 44/274 (16%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT----------- 252
A +F + I++ T ++ +K G++ +A Y + RG+
Sbjct: 4 ARRLFDQMAQVGIQVNTITFNVLIDGYAKSGQMHQASAAYREMQARGLVPDSCTFNIIAA 63
Query: 253 -----------VRDSDYYA----------FVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
V D D ++ V LC +H+ ++ L +E+G
Sbjct: 64 RAHKFRYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELRLGAIEQGVPLRVT 123
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ +A+ +G +E EL + GL S + L+ C+ ++D+A + +
Sbjct: 124 GFNALIAAYNKEGLHEEASELYRIINKLGLTPSSSTFNYLIMGLCNQVRLDEA---QLLL 180
Query: 352 EKL--KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV----VSSSSFVIVVSRLC 405
E + KG ++ + LD F+DG A++ +D M ++ + ++ S+++ SRL
Sbjct: 181 EHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLD 240
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ E +A EM G P+ TY +IS
Sbjct: 241 YVNEAYQAFA---EMTSRGIVPNNITYNSIISAL 271
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 9 DSQSD--ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
D Q+D A S ++ S + + + M G VP N+++ AL + + A
Sbjct: 221 DLQTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEA 280
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDF 121
L M + G+ P+ +T +++ LCR GK ++V LL +G+ +V YN +I+
Sbjct: 281 FKLEQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINA 340
Query: 122 YSKKGDFGAAFDRLNEM 138
Y + D +A + +N+M
Sbjct: 341 YCRAQDMNSAMNFMNKM 357
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S + ++ LD Y G + L+ + M A +A ++ R + + A +
Sbjct: 191 STSFTICLDAYFRDGNAVGALKCWDDMGKIDLQTDFIAFSAYINGRSRLDYVNEAYQAFA 250
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGK----FEVVLGLLDSG----IYSSVMYNLVIDFYS 123
M G+ PN T++ + LC++G F++ + SG IY+S N++ID
Sbjct: 251 EMTSRGIVPNNITYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTS---NILIDGLC 307
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++G + L +MC+ LTP TY++I++ R + + + M+ P
Sbjct: 308 REGKLKMVDNLLLDMCSN-GLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDI 366
Query: 184 F 184
F
Sbjct: 367 F 367
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 194/456 (42%), Gaps = 48/456 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F + ++R M G P L+D+L + + L G MV GV + T+
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347
Query: 86 SLVAQILCRSGKFEVV-----LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + L + GK + V L D+ + V Y ++ID K + A L EM
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM-E 406
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
++++P T+SS+++G + + + +M E+ + P G + G+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT-LIDGFFKFQGQ 465
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A E+ C E +++ ++ L + G+++EA+ ++ S G+++ +Y
Sbjct: 466 DAALEVYHDMLC-EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ L K +++++R +P A+ + F+ C GK+KE + L+ + + G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
L D ++++ +C + KA+ L +K+ +K +L TY+ L+ GLF G +E+
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL--ITYNTLVAGLFGTGAVEK 642
Query: 379 AVRIFDYM-------------KELKVVSSSS-----------------------FVIVVS 402
A + + M + L+ S S + ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
LC+ RKA +EML G PD T+ +I G
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 170/412 (41%), Gaps = 9/412 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L V M G V N L+ R ++ A + M GV PN T++
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 91 ILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLT 145
CR+ E L + + + V+ ++V + + G F A+ EM +
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM-DKVGAA 306
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P TY +++D + + + ++G MV + ++ L ++ L GKT +
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD--LVTYTALMDWLGKQGKTDEVK 364
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ A + + T ++ AL K V EA Q+ + E+ I+ + + +N
Sbjct: 365 DTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
K ++ R + ERG P + + E+ +L +G+ ++
Sbjct: 425 VKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNK 484
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
F SL+ N +I++A+AL SLD Y L+DGLFK G M A +
Sbjct: 485 FIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQE 544
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ + ++ + + + ++ LC L + ++A EM MG KPD++TY +I
Sbjct: 545 LMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 178/433 (41%), Gaps = 11/433 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
S V++ + +GL E RMM+ G P V L+D ++ A +Y M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDF 128
+ +GV NKF + L ++GK E + L SG+ V Y +ID K GD
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
AF E+ + RN+ P Y+ ++ K + + + M L P S
Sbjct: 536 PTAFKFGQELMD-RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ--STY 592
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ +I G+T A + I+ T ++ L G V++A + + +
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G + + + + + + + + ++ G + + C G ++
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
+L +L G+ D+ ++L+ +C + +D A A + ++ S ++AT++ LL
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK--AMKNHDEMLKMGHK 426
GL GR+ EA + M E + ++ + H K+ K AM+ + EM+ G
Sbjct: 773 GLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831
Query: 427 PDEATYKQVISGF 439
P +TY +IS F
Sbjct: 832 PKVSTYNALISDF 844
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 23/390 (5%)
Query: 8 RDSQSDALSLVLDCYSH--KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R +D SL YSH L + + R R P A N LL AL
Sbjct: 67 RFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH--- 118
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SGIYS--SVMYNLVIDF 121
A + M + GV + T + + LCR+G+ + L D GI++ + +N +I
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAG 178
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y + GD AA + M + L Y++++ G R + + + ++ +M E + P
Sbjct: 179 YCRVGDTPAALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +++ G A ++ ++ + L T ++ L ++GR EA
Sbjct: 238 -NVATYTPFIVYYCRTKGVEEAFDL-YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA--S 299
++ + + G Y ++ L K + +E+ LL ++V RG + M+L + A
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV---MDLVTYTALMD 352
Query: 300 QCGK-GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
GK GK EV++ L L L + + L++ C +D+A + +++E+ S
Sbjct: 353 WLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISP 412
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+V T+ +++G K G +++A MKE
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKE 442
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 20/355 (5%)
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
CR + LL S ++V YN+++ S D A L EMC R + T +
Sbjct: 84 CRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCK-RGVPFDGVTVN 139
Query: 153 SILDGARRYEKTE----VSDRIVGLMVEKKLLPKHFLS--GNDYVIQKLSDMGKTYAAEM 206
++L G R + + ++DR G+ H L G + +I +G T AA
Sbjct: 140 TLLAGLCRNGQVDAAAALADRGGGI---------HALDVIGWNTLIAGYCRVGDTPAALS 190
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ R + + + ++ + G+V A + ++ E G+ + Y F+ C
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ EE L +V G + + LS VA C G++ E L + G +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY- 385
+L++ + + ++L ++ +D+ TY L+D L K G+ +E +
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + + ++ +++ LC + +A + EM + P+ T+ VI+GF+
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 193/460 (41%), Gaps = 51/460 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G D + + +++ G M+ + M V G + C ++D L++ + + A
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNL-----VIDF 121
++ +++ ++PN T+S + C+ GK E+ +L V N+ +I+
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y+KKG A D L EM RN+ P Y+ ++DG + + +V+D M ++L
Sbjct: 506 YAKKGMLSKAVDVLREMVQ-RNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + D ++ L +G+ A + + I+ ++ KEG A+
Sbjct: 565 SNVIF--DILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622
Query: 242 IYHLISERGITVRDSDYYAFVNVLCK--EHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
I + E+ I Y A + L + ++ P VC + +E G P + + + +
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRM---IELGLAPDCITYNTIINT 679
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFC--------CSS-----------LMEYYCSNRQ 340
C KGK ++ ++L+ + G++ ++ C + L++ Y + +
Sbjct: 680 YCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEK 739
Query: 341 IDKAIALHIKIEKLKGS-LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
DK + +H EKL S L++ V+LD + K G + V ++
Sbjct: 740 ADKILQIH---EKLVASGLELKRQKVVLDEMVKRGISADLV---------------TYNA 781
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ C + KA+K + +M G P+ TY ++ G
Sbjct: 782 LIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 821
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 181/435 (41%), Gaps = 26/435 (5%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
F + MR G VP + N LL + +Y M+ GV P+ F+ ++
Sbjct: 75 FSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNV 134
Query: 88 VAQILCRSGKFEVVLGLL---DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+ LC+ G ++ LG L D +V YN VI + +KG F L+EM R L
Sbjct: 135 LVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVK-RGL 193
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
T + ++ G R + ++ ++ +V+ + K + N + + + A
Sbjct: 194 CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGG-VTKDVIGLNTLIDGYCEAVLMSQAT 252
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI----------SERGITVR 254
E+I + + +++ T +LKA K G + A +++ I + +
Sbjct: 253 ELI-ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQ 311
Query: 255 DS---------DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ Y + CK EE L + ++ G +P + S + C GK
Sbjct: 312 NEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E L + + GL + ++++ + ++ +A L ++ S D+ T
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
++DGLFK G+ +EA +F+ + +L + + ++ ++ C L ++ A +M K
Sbjct: 432 VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491
Query: 425 HKPDEATYKQVISGF 439
P+ T+ +I+G+
Sbjct: 492 VPPNVITFSSIINGY 506
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/458 (19%), Positives = 179/458 (39%), Gaps = 32/458 (6%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D + + V+ + KGL G + M G CN L+ R ++ A
Sbjct: 159 DIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEW 218
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYS 123
+ +V GV+ + + + C + L+++ S V YN ++ +
Sbjct: 219 VMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFC 278
Query: 124 KKGDFGAAFDRLNEMCNG------------------RNLTPGFSTYSSILDGARRYEKTE 165
K GD A NE+ +NL P TY++++ ++ E
Sbjct: 279 KTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
S + M+ ++P + ++ GK A ++F+ + ++ +
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSS--ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYAT 396
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
++ +L K GRV EA + + RGI+ ++ L K + +E + +++
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + S + C GK + E +L + + + + SS++ Y + KA+
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV----SSSSFVIVV 401
+ ++ + + Y +L+DG FK G + A D+ KE+K S+ F I++
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVAD---DFCKEMKSRRLEESNVIFDILL 573
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L + + +A +M G PD Y +I G+
Sbjct: 574 NNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 143/358 (39%), Gaps = 64/358 (17%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
+A SL++D YS G P + +L+D +++ A +
Sbjct: 584 EARSLIIDMYSK-----------------GIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFE---VVLGLLDSGIYSS-VMYNLVIDFYSKKGDF 128
M + + ++ + + L R GK++ V +++ G+ + YN +I+ Y KG
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKT 686
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDG----------------ARRYEKTEVSDRIVG 172
A D LNEM + P TY+ ++ G + Y ++E +D+I
Sbjct: 687 EDALDILNEM-KSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKI-- 743
Query: 173 LMVEKKLLPKHF-LSGNDYVIQKLSDMG-----KTYAAEM--------------IFKRAC 212
L + +KL+ L V+ ++ G TY A + + +
Sbjct: 744 LQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 803
Query: 213 DEKIELQDDTCGCMLKALSKEG----RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
+ I T +L LS G ++E ++ ++ERG+ + Y V+ +
Sbjct: 804 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 863
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
++ L +++ +G++P + ++ GK E ELL+ +L KG + +SF
Sbjct: 864 GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSF 921
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 183/436 (41%), Gaps = 27/436 (6%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V++ + ++G M+ ++ M+ G +P V N L++ + +I A+ LY M
Sbjct: 225 VINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKA 284
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAF 132
V+P+ T++++ R G+ E LL + S +YN+ + G A
Sbjct: 285 VAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAM 344
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
L +M + +TP ++SI+ R E + + +MV+ L P + +I
Sbjct: 345 KFLEDMLE-KGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSS--LI 401
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
LS + + A + E + + +L + G V A +++ + RGI
Sbjct: 402 MGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIH 461
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ AF+N L +E + + ++G++P + + C G+ +E L
Sbjct: 462 PDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALML 521
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
+ KGLL D F + ++ C ++ A + + D+ TY+ L+DG K
Sbjct: 522 EREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCK 581
Query: 373 DGRMEEAVRIFDYMKELKVVSS----------SSFVIVVSRLCHLKELRKAMKNHDEMLK 422
FD + +VV+ +++ I + LC +++ +A+ +E++
Sbjct: 582 ---------AFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELIS 632
Query: 423 MGHKPDEATYKQVISG 438
G PD TY V++G
Sbjct: 633 AGVVPDTVTYNTVMNG 648
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 152/367 (41%), Gaps = 34/367 (9%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A + ++ YS GL + YRMM +G P+ C++L+ L + ++ A L M
Sbjct: 361 AFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEM 420
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+ +G+ NK + L++D Y + GD A+
Sbjct: 421 IVEGLPINK------------------------------AAFTLLLDGYFRMGDVAGAYS 450
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
NEM GR + P +S+ ++G + + + M +K +P +F+ + +I+
Sbjct: 451 LWNEM-EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNS--LIR 507
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ G+ A M+ + + + T ++ L KEGR+K A ++ + G+
Sbjct: 508 GFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIP 567
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ CK ++ + G+ P + + C K +L
Sbjct: 568 DIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMML 627
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
++ G++ D+ +++M C++ +++A+ + K+ K+ +V T ++LL K
Sbjct: 628 EELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQ 686
Query: 374 GRMEEAV 380
G E+ +
Sbjct: 687 GMPEKTI 693
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 185/462 (40%), Gaps = 85/462 (18%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ KG G + +M+ + P V A N L++A + + A M+ +G +P+
Sbjct: 159 FCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPS 218
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T+ V C G L D I + V YN +++ Y K D G A + L
Sbjct: 219 LVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQA-NMLY 277
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV--------------------GL--- 173
E + + P +T++ ++ G RY + E DR++ GL
Sbjct: 278 EEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWA 337
Query: 174 ------------MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
M+EK + P + + +I S G A ++ +
Sbjct: 338 GWLDEAMKFLEDMLEKGITPT--VVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSL 395
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG---LL 278
TC ++ LSK R++EA + + + G+ + + AF +L + +V G L
Sbjct: 396 TCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKA---AFTLLLDGYFRMGDVAGAYSLW 452
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
++ RG P A+ S F+ G E ++ + KG + ++F +SL+ +C++
Sbjct: 453 NEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNS 512
Query: 339 RQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSF 397
++ +A+ L ++ + KG L D+ T +++++GL K+GRM+ A +F M ++
Sbjct: 513 GRLQEALMLEREMAR-KGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLI----- 566
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
PD TY +I G+
Sbjct: 567 -----------------------------PDIVTYNTLIDGY 579
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 47/222 (21%)
Query: 6 EGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
EGR DA+ S ++ S GL + +V+ M GF+P N+L+ +
Sbjct: 456 EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRL 515
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLV 118
+ A L M R G+ P+ FT +++ LC+ G+ +V + +G+ V YN +
Sbjct: 516 QEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTL 575
Query: 119 IDFYSKKGD-----------FGAAFD--------RLNEMCNGRNLT-------------- 145
ID Y K D + +D RL+ +C GR ++
Sbjct: 576 IDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGV 635
Query: 146 -PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
P TY+++++G T+V +R ++V KLL F+
Sbjct: 636 VPDTVTYNTVMNGV----CTDVLER--AMIVTAKLLKMAFVP 671
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
EA++I + E G+ S +L + V LLR ++ +G PC + +
Sbjct: 97 EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVI 156
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C KG K E LL + D + + L+ YC+ Q A+ + +
Sbjct: 157 LGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCT 216
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKEL-KVVSSSSFVIVVSRLCHLKELRKAMKN 416
+ T+ +++ G M EA +FD MKE + + + +++ +++ +A
Sbjct: 217 PSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANML 276
Query: 417 HDEMLKMGHKPDEATYKQVISG 438
++EM PD T+ +++G
Sbjct: 277 YEEMKSKAVAPDCTTFNILVAG 298
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG A +L+LD Y G ++ M G P A +A ++ L +
Sbjct: 423 EGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDE 482
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL---------GLLDSGIYSSVMYN 116
A ++ M + G PN F ++ + + C SG+ + L GLL I+++ N
Sbjct: 483 AYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPD-IFTT---N 538
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
++I+ K+G +A D M + L P TY++++DG + T +D +V M
Sbjct: 539 IIINGLCKEGRMKSASDVFRNM-HHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYA 597
Query: 177 KKLLP 181
P
Sbjct: 598 TGWDP 602
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 10/361 (2%)
Query: 83 FTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+T++ + + LC GK + + + D I V YN +ID K F L E
Sbjct: 138 WTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEE 197
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEK-TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
M + + P T++ ++ + K E SD +V MVE + P F +I
Sbjct: 198 MKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVK-MVESGVSPDCFTYNT--MINGFC 254
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
GK A + + ++ T ML L E + +EA ++ +RG + +
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEV 314
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y + K Q ++ L ++ +RG +P + + + C GK + + L+ +
Sbjct: 315 TYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNEL 374
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
L+KGL+ D C+ ++ YC +DKA H K+ D+ T ++LL GL + +
Sbjct: 375 LEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDML 434
Query: 377 EEAVRIFD-YMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
E+A ++F+ ++ + V ++ ++S LC L +A +M +PD+ TY +
Sbjct: 435 EKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAI 494
Query: 436 I 436
+
Sbjct: 495 V 495
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 183/470 (38%), Gaps = 92/470 (19%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM-VRDGVSPNKF 83
+G + + V M +P V N L+D ++ L M R GV PN
Sbjct: 150 EGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAV 209
Query: 84 TWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEM 138
T +++ + + GK + V+ +++SG+ YN +I+ + K G G AF ++EM
Sbjct: 210 THNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEM 269
Query: 139 CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
+ L P T +++L L +EKK P+
Sbjct: 270 AR-KGLKPDICTLNTMLHT---------------LCMEKK--PEE--------------- 296
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
A E+ K A L + T G ++ K + +A++++ + +RGI Y
Sbjct: 297 ----AYELTVK-ARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSY 351
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK------------- 305
+ LC + ++ L +++E+G +P + + + C +G
Sbjct: 352 NPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVG 411
Query: 306 ----------------------WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
++ +L ++ + K +D ++++ Y C ++D+
Sbjct: 412 NSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDE 471
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE-------------AVRIFDYMKELK 390
A L +E K D TY+ ++ L GR EE AV+ D +EL
Sbjct: 472 AFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELD 531
Query: 391 VVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
S + +S LC + ++AMK E + G ++ TY +++ GF+
Sbjct: 532 ASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFL 581
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 172/440 (39%), Gaps = 91/440 (20%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMV 74
+L+ C+ +G +G + M+ G V P N ++ ++ +I AS MV
Sbjct: 177 TLIDGCFKWRG-STEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMV 235
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
GVSP+ FT++ + C++GK G AF
Sbjct: 236 ESGVSPDCFTYNTMINGFCKAGK------------------------------LGEAFRM 265
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
++EM + L P T +++L L +EKK P+
Sbjct: 266 MDEMAR-KGLKPDICTLNTMLH---------------TLCMEKK--PEE----------- 296
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVR 254
A E+ K A L + T G ++ K + +A++++ + +RGI
Sbjct: 297 --------AYELTVK-ARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPS 347
Query: 255 DSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLS 314
Y + LC + ++ L +++E+G +P + + + C +G + + +
Sbjct: 348 VVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHN 407
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
++ D F + L+ C ++KA L + S+DV TY+ ++ L K+G
Sbjct: 408 KMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEG 467
Query: 375 RMEEAVRIFDYMKELKV----VSSSSFVIVVSRLCH-------------LKELRKAMKNH 417
R++EA FD M +++V ++ +V L H L E +A+K H
Sbjct: 468 RLDEA---FDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTH 524
Query: 418 DEMLKMGHKPDEATYKQVIS 437
D ++ D Y Q IS
Sbjct: 525 DTSQELDASSD-IMYSQQIS 543
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+D + ++L++ C +ID+AI + ++E LK DV TY+ L+DG FK E R+
Sbjct: 135 IDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRL 194
Query: 383 FDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ MK V ++ I+V ++ +A +M++ G PD TY +I+GF
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYS-SVMYNLVIDFYS 123
L+ M + G+ P+ +++ + + LC SGK + + LL+ G+ V N++I Y
Sbjct: 335 LWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYC 394
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
+G AF N+M G + P T + +L G R + E + ++ + K+
Sbjct: 395 WEGMVDKAFQFHNKMV-GNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQ--NSV 451
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ + +I L G+ A + +K E T +++AL+ GR +EA +
Sbjct: 452 DVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFM 511
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+SE G V K H + D++ S+ ++ C +
Sbjct: 512 SKLSETGQAV-------------KTHDTSQELDASSDIM----------YSQQISDLCTQ 548
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
GK+KE +L KG+ L+ + LM+ + R+
Sbjct: 549 GKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRK 585
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
S+DV TY+ L+ GL +G+++EA+R+ D M+ LK++
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIP 170
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 165/365 (45%), Gaps = 20/365 (5%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
NA++ A R + I + + + G PN +T+ V Q L ++G + + LD I
Sbjct: 18 NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIK 77
Query: 111 S-----SVMYNLVIDFYSKKGDFGAA---FDRLNEM-CNGRNLTPGFSTYSSILDGARRY 161
+ +++YN+V+D K A F + M C + T Y+ ++ R
Sbjct: 78 TGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYT-----YAILIRSLGRC 132
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
++ E + + M E+ P N VI G+ +A ++ K+ D+ + D
Sbjct: 133 KRDEEATLLFDEMEERGCTPSAPAYTN--VIDIYCKAGRIESAMVVLKKMLDKNLAPDDY 190
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ A+S+ GR + A +I+ + + G+ V + A ++ K + + ++
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEM 250
Query: 282 VERGYIPCAMELSRFVASQC-GKGKW-KEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
RG P ++ + + C G+ K+ E ++L + GL D F + ++E +
Sbjct: 251 EARGIKPNSITFNTLI--NCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAG 308
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
+ KA + +EK S +V TY++L+D L K GR ++A I+ MK+ ++ +
Sbjct: 309 NMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITAT 368
Query: 400 VVSRL 404
V+ +L
Sbjct: 369 VLQQL 373
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 5/278 (1%)
Query: 167 SDRIVGLMVEKKLLPKHFLSGNDY----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
S RI +M E + L KH N Y VIQ L G A + +E
Sbjct: 27 SSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLL 86
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
+L L K + EA +++ + G D Y + L + + EE L ++
Sbjct: 87 YNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEME 146
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
ERG P A + + C G+ + +L +LDK L D + +SL+ + +
Sbjct: 147 ERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTE 206
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVV 401
A + +++K +++ +++ +LD K G++ A + D M+ + +S +F ++
Sbjct: 207 LACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLI 266
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ L K +A K EM G PD TY +I F
Sbjct: 267 NCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAF 304
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 41/249 (16%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + A + V+D Y G + V + M P N+L+ A+ R LA
Sbjct: 149 GCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELA 208
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKG 126
++ M + GV+ N +V +N ++D K G
Sbjct: 209 CEIFERMKKSGVAVN------------------------------TVSFNAMLDCCGKAG 238
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL- 185
G A+ ++EM R + P T++++++ R + + +++ M L P F
Sbjct: 239 KVGLAYQFMDEM-EARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTY 297
Query: 186 SGNDYVIQKLSDMGKTYAAEM---IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ K +MGK + EM + K C + T ++ AL K GR ++A I
Sbjct: 298 TCMIEAFAKAGNMGKAF--EMFGDMEKAGCSANVV----TYNLLIDALVKAGRYQDARDI 351
Query: 243 YHLISERGI 251
Y + ++GI
Sbjct: 352 YFDMKKKGI 360
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 158/386 (40%), Gaps = 43/386 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + L+++++C+ H G V + G+ P L+ L + E++
Sbjct: 81 KGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQK 140
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
+ + +V G N+ ++ + LC+ G+ + L S + VMYN +ID
Sbjct: 141 SVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIID 200
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K A+D +EM N R + P TY++++ G + + ++ M+ K +
Sbjct: 201 GLCKDKLVNEAYDFYSEM-NARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN 259
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + TYA ++ AL KEG+VKEA
Sbjct: 260 PNVY----------------TYAI---------------------LIDALCKEGKVKEAK 282
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ + RG Y + ++ CK ++ L + E G P + +
Sbjct: 283 NLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGL 342
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G+ K+ ++L +L KG +D + ++ C +D+A+A+ K+E +V
Sbjct: 343 CKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNV 402
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYM 386
T+++++ LFK ++A ++ M
Sbjct: 403 VTFEIIIRSLFKKDENDKAEKLLHEM 428
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L +G+T A + D L ++ L K+ V EA Y ++ RG
Sbjct: 163 LLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARG 222
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + C Q LL +++ + P + + + C +GK KE +
Sbjct: 223 IFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAK 282
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
LL+ + +G D +SL++ +C N+ +DKA AL +K+++ + TY L+DGL
Sbjct: 283 NLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGL 342
Query: 371 FKDGRMEEAVRIF-DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K GR+++A ++F D + + + ++ +++ LC L +A+ +M G P+
Sbjct: 343 CKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNV 402
Query: 430 ATYKQVI 436
T++ +I
Sbjct: 403 VTFEIII 409
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 1/217 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G +L L K G + AI+ +I + + Y ++ LCK+ E ++
Sbjct: 161 GTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNA 220
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
RG P + + + C G+ LL+ ++ K + + + + L++ C ++ +
Sbjct: 221 RGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKE 280
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A L ++ DV TY LLDG K+ +++A +F MKE + + ++ ++
Sbjct: 281 AKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALID 340
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC L+ A K ++L G D TY +I G
Sbjct: 341 GLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGL 377
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 1/214 (0%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G +L L+K AI + + +GI +N C Q +L +++
Sbjct: 56 GEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILK 115
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
GY P + L+ + C KG+ ++ V+ +G ++ +L+ C +
Sbjct: 116 LGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRC 175
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
AI IE L+V Y+ ++DGL KD + EA + M + + ++ ++
Sbjct: 176 AIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIG 235
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
C +L A +EM+ P+ TY +I
Sbjct: 236 GFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 166/362 (45%), Gaps = 14/362 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ ++ G L++ M +G P ++D R + A ++ MV G
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAA- 131
+ P+ T++++ C++G+ + LG+L++ + ++ Y ++D Y K G A
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKAL 431
Query: 132 --FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
FDR+ L PG +Y+S+L G + + E + ++ M+ ++P
Sbjct: 432 EVFDRIKTA----GLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNE--RSYT 485
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+ + + G A +F+R E + + G +LKA K G ++ A++++ I++
Sbjct: 486 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDA 545
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+ Y ++ ++ + + LL+D+ + G+ + + F+ + G +EV
Sbjct: 546 GLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEV 605
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
E L+ + +K L +++ ++L+ + + D+AI+ + + + LD A + LL G
Sbjct: 606 TETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSG 665
Query: 370 LF 371
L
Sbjct: 666 LI 667
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 161/401 (40%), Gaps = 44/401 (10%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG- 103
P + L+D R + A + AM + PN ++ + + E +
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188
Query: 104 ---LLDSGIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+L GI + ++ +I Y+ G+ AA + E NL PG Y+SI+
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAA-EHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ E + ++ M E+ + L V+ +++ F R +
Sbjct: 248 QAGNMETVEALLAQMEEEGF--QGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPT 305
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T GC++K +K G + +A+ I + + G++ Y ++
Sbjct: 306 AATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIY-----------------AMIM 348
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
D RG F A+ +K E+++SA GL D + L+ +C
Sbjct: 349 DGYARG--------GDFTAA------FKVWEDMVSA----GLKPDIVTYNILVHAFCKAG 390
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFV 398
++DKA+ + I+ + + TY +LDG K G +++A+ +FD +K + S+
Sbjct: 391 RMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYN 450
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++S L +++ A DEML G P+E +Y + G+
Sbjct: 451 SLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGY 491
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 147/398 (36%), Gaps = 79/398 (19%)
Query: 80 PNKFTWSLVAQILCRSGKFEVVLGLL----------DSGIYSSVM--------------- 114
P ++ + Q C++G E V LL + G+Y++V+
Sbjct: 234 PGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSF 293
Query: 115 ---------------YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
Y ++ ++K G+ A D L EM + ++P Y+ I+DG
Sbjct: 294 FHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYA 352
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
R + ++ MV L P + + ++ G+ A + + ++
Sbjct: 353 RGGDFTAAFKVWEDMVSAGLKPD--IVTYNILVHAFCKAGRMDKALGVLENIQANRLLPT 410
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
+T +L K G +++A++++ I G+ Y + ++ L K Q
Sbjct: 411 IETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ--------- 461
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
ME +R +L +L G++ + ++L E Y
Sbjct: 462 -----------MENARL---------------MLDEMLANGVVPNERSYTALTEGYARAG 495
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFV 398
++KA + +++K ++D+ Y LL K G M+ AV +F + + + + ++
Sbjct: 496 DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYC 555
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
++ EL KA +M K G D Y I
Sbjct: 556 TMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFI 593
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 156/378 (41%), Gaps = 46/378 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L++D + KG + + M G P V AL++ L +Q I+ A L MVR
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
G PN +T + + LC+ G F + L L+ S Y + Y +I+ Y K+
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L+ M + L P +TY++++DG H GN
Sbjct: 383 RAEMLLSRM-QEQGLVPNTNTYTTLIDG-------------------------HCKVGNF 416
Query: 190 YVIQKLSD-MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+L D MGK + I+ T ++ L K+G + EA ++ + +S
Sbjct: 417 VRAYELMDLMGKEGFSPNIY-------------TYNAIIDGLCKKGSLDEAYRLLNKVSV 463
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G+ Y ++V C++ +++ G+ P + ++ C + + KE
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKE 523
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E L + GL+ +S++ YC A+ L ++ + D TY L+
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALIS 583
Query: 369 GLFKDGRMEEAVRIFDYM 386
GL K+ ++++A ++D M
Sbjct: 584 GLCKESKLDDARNLYDAM 601
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 178/428 (41%), Gaps = 16/428 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
++ G + + + M+ G V + N +LD + +A ++ M + GVSP+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 82 KFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAA---FD 133
++ L+ C G+ + + +++ G I + L+ID + +KG F
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
++ EM L P ++++++G + + + ++ MV + P + + +I
Sbjct: 284 KMVEM----GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY--THTTLID 337
Query: 194 KLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
L G T A +F K + + T M+ KE ++ A + + E+G+
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y ++ CK L+ + + G+ P + + C KG E L
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFK 372
L+ V GL D + LM +C ++++ K+ K+ + D+ +Y L+ +
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCR 517
Query: 373 DGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+M+E+ R+F+ L ++ + ++ ++ C A+K M G PD T
Sbjct: 518 QKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSIT 577
Query: 432 YKQVISGF 439
Y +ISG
Sbjct: 578 YGALISGL 585
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 114/229 (49%), Gaps = 2/229 (0%)
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++ +E ++ CM+ ++ G++KEA+ + + +G+ ++V E
Sbjct: 147 NKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVE 206
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ ++ +RG P + V + C G+ E E+ L+A++++G ++D+ C+ ++
Sbjct: 207 IAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLII 266
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKV 391
+ +C +++ + K+ ++ + +V + L++GL K G +++A + + M +
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGF 439
+ + ++ LC KA + ++++ G+KP+ TY +I+G+
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 17/291 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVY-RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
+ ++D KG ++ +++R G+ P V A+++ +++++ A L M
Sbjct: 333 TTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSKKG 126
G+ PN T++ + C+ G F L+D IY+ YN +ID KKG
Sbjct: 393 EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT---YNAIIDGLCKKG 449
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
A+ LN++ + L TY+ ++ R T S M++ P +
Sbjct: 450 SLDEAYRLLNKV-SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPD--IH 506
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+I + +E +F+ A + T M+ + G A++++ +
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
S G Y A ++ LCKE + ++ L ++++G PC E++R
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPC--EVTRLT 615
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 204/494 (41%), Gaps = 78/494 (15%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
+ + AL +++ S GL + L V+R +R +PA+ ACNA+LD L + A L
Sbjct: 117 TPAPALGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAWEL 173
Query: 70 YGAMVRDGVSPNKFTWS---------------------LVAQ--------------ILCR 94
+ M+R G+ P+ T++ +VAQ LC
Sbjct: 174 FDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCE 233
Query: 95 SGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
G L D+ G+ + YN+++ + ++ D +A E+ L P
Sbjct: 234 EGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKS-GLNPNAV 292
Query: 150 TYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD----MGKTY 202
+++++DG A+R+ + + G+ +E +P+ ++ V L D G
Sbjct: 293 IFTTLIDGFCKAKRFSEAK------GMFLE---MPRFGVAPTVPVYNSLMDGAFRSGNAQ 343
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +++ + + TC +++ L G++ A + + E G+ + + Y A +
Sbjct: 344 EALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALI 403
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
+ C+ EE + E G P + S + +GK + + + ++ KG+
Sbjct: 404 DEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIE 463
Query: 323 LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
+ ++L+ + N ID A LH ++ + S + T VL+DGL ++ R++EAVR
Sbjct: 464 PNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRF 523
Query: 383 ------------------FDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
F +E + +S ++ ++ L + +A K M K G
Sbjct: 524 VMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSG 583
Query: 425 HKPDEATYKQVISG 438
PD TY +I G
Sbjct: 584 MIPDSFTYTLLIRG 597
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/421 (18%), Positives = 171/421 (40%), Gaps = 51/421 (12%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G D ++ M+ G P N L+ +++++ A LY +++ G++PN
Sbjct: 234 EGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVI 293
Query: 85 WSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
++ + C++ +F G+ + + FG A
Sbjct: 294 FTTLIDGFCKAKRFSEAKGM-----------------FLEMPRFGVA------------- 323
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y+S++DGA R + + + M L P F V++ L D G+ + A
Sbjct: 324 -PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTC--SIVVRGLCDGGQMHVA 380
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ + ++ + L ++ + G ++EA+ ++E GI Y + ++
Sbjct: 381 DRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDG 440
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
K + + + ++V +G P + + + G L +++ G+ +
Sbjct: 441 HSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPN 500
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS-----------------LDVATYDVLL 367
+ S L++ C ++ +A+ ++ LK S + Y L+
Sbjct: 501 AITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLI 560
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
GL+ DG+ EA ++F YM++ ++ S ++ +++ C L + AM + +M+K+G K
Sbjct: 561 YGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVK 620
Query: 427 P 427
P
Sbjct: 621 P 621
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + + + ++D + F + ++ M +G P V N+L+D +R + A
Sbjct: 286 GLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEA 345
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV----VLGLLDSGI-YSSVMYNLVIDF 121
LY M R G+ P++FT S+V + LC G+ V + G+ + G+ ++ YN +ID
Sbjct: 346 LALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDE 405
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y + G+ A M + P +YSS++DG + K +++ I MV K + P
Sbjct: 406 YCRIGNLEEALATCTRMTE-VGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEP 464
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ +I + G AA + K + I T ++ L +E RV+EA++
Sbjct: 465 N--VVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 39/217 (17%)
Query: 224 GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVE 283
G ++ ALS+ G + EA+ ++ + R + + A ++ L K +P L +++
Sbjct: 123 GVLVIALSQMGLLDEALYVFRRL--RTLPALPA-CNAVLDGLVKARRPGCAWELFDEMLR 179
Query: 284 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 343
RG +P + + + + +G + +E+ ++ + QID
Sbjct: 180 RGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQ--------------------QIDP 219
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
+V TY ++ L ++G + +A R+FD MKE + + ++ +++S
Sbjct: 220 ---------------NVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMS 264
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ A+ + E+LK G P+ + +I GF
Sbjct: 265 GHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGF 301
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 33/167 (19%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + A + ++D Y G + L M G P V + ++L+D ++ ++++
Sbjct: 390 DGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQI 449
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A +Y MV G+ PN T Y +I ++K
Sbjct: 450 AMAIYTEMVAKGIEPNVVT------------------------------YTALIHGHAKN 479
Query: 126 GDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIV 171
G AAF EM NG ++P T S ++DG R + + + R V
Sbjct: 480 GGIDAAFRLHKEMIENG--ISPNAITVSVLVDGLCRENRVQEAVRFV 524
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 192/441 (43%), Gaps = 66/441 (14%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD-GVSP 80
++ GLF + ++V+ +M+ +G P+V N+LL L ++ +A +Y M+ GV+P
Sbjct: 159 FNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTP 218
Query: 81 NKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ FT++++ + C +G F + L G V+ YN ++D + G A++ +
Sbjct: 219 DTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVV 278
Query: 136 NEMCNGR-NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
M +L P TY++++ G + E + + MV + L + + +I+
Sbjct: 279 KGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY--NTLIKG 336
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGIT 252
L + K + I + + DTC ++ G + +A++++ +SE I
Sbjct: 337 LCEARKFEKIKDILEGTAGDGT-FSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQ 395
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y A V LC+ G +++ E+L
Sbjct: 396 PDSATYSALVRSLCQ-----------------------------------GGHYEKAEDL 420
Query: 313 LSAVLDKGLLLDSFCCSSLM-------EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
L +L++ +LL C L+ +Y C + KA ++ + +G+ D +Y
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMR-RGTQDPPSYKT 479
Query: 366 LLDGLFKDGRMEEAVRIF------DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
L+ G K+G E + D++ + + S +++ L H+ + A+++ ++
Sbjct: 480 LIMGHCKEGTFESGYELLVLMLRKDFLPDFETYES-----LINGLLHMDKPLLALQSLEK 534
Query: 420 MLKMGHKPDEATYKQVISGFM 440
ML+ H+P+ +T+ +++ +
Sbjct: 535 MLRSSHRPNSSTFHSILAKLL 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/369 (18%), Positives = 147/369 (39%), Gaps = 56/369 (15%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR---- 59
S G + ++++ + G+ DG ++ + +G P V N L+D L R
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 60 ---------------------------------QNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ EI A ++ MV G+ N T++
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 87 LVAQILCRSGKFEVVLGLLDS----GIYS--SVMYNLVIDFYSKKGDFGAA---FDRLNE 137
+ + LC + KFE + +L+ G +S + +N ++ + G+ A F+R++E
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSGNDYVI 192
+ + P +TYS+++ + E ++ ++ ++E+K+L K ++ + +
Sbjct: 392 L----KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIF 447
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ L + GKT AE F++ + + ++ KEG + ++ L+ +
Sbjct: 448 KYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFL 506
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y + +N L +P L ++ + P + +A +G+ E L
Sbjct: 507 PDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASL 566
Query: 313 LSAVLDKGL 321
+ +LDK +
Sbjct: 567 IQLMLDKNI 575
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 169/410 (41%), Gaps = 53/410 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L+ + EI A ++ MV G+ N T++ + + LC + KFE + +
Sbjct: 290 PNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDI 349
Query: 105 LDS----GIYS--SVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSIL 155
L+ G +S + +N ++ + G+ A F+R++E+ + P +TYS+++
Sbjct: 350 LEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL----KIQPDSATYSALV 405
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+ E ++ ++ ++E+K+L K ++ + + + L + GKT AE F++
Sbjct: 406 RSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQ 465
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + ++ KEG + ++ L+ + Y + +N L +
Sbjct: 466 LMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDK 524
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
P L ++ + P + +A +G+ E L+ +LDK + + +
Sbjct: 525 PLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTG 584
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+ DKA L + L G Y V +MEE +R + + K
Sbjct: 585 CVRLLFGAGMNDKAFQL---VHLLYGK----GYSV---------KMEELIRYLCHCR--K 626
Query: 391 VVSSSSFVI----------------VVSRLCHLKELRKAMKNHDEMLKMG 424
V+ S ++ V+ +LC + +L +A + ++++MG
Sbjct: 627 VIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMG 676
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 13/407 (3%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 96
M R P + NAL+ AL R+ ++R A MVR G P+ FT++ + CR+
Sbjct: 119 MYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQ 178
Query: 97 KFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
+ EV L + +V Y +I+ + + G A + EM P T+
Sbjct: 179 QLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ-----PDMYTH 233
Query: 152 SSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA 211
++++ G + E + + L K+L + ++ K AE I
Sbjct: 234 AALVKGLCDAGRGE--EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM 291
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
D + TC ++ A +EGR+ A++++ + +G Y A V C +
Sbjct: 292 FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKV 351
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
+ LL + E G P + + + QC G LL + GL D + + L
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVL 411
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ C ++D+A +L +E + T++ +++GL K G+ + A + M
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY 471
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
+ ++ + LC K ++ + DEML+ KP Y VI+
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN 518
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 150/330 (45%), Gaps = 8/330 (2%)
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ YN +I ++ D A L+ M P T++S++ G R ++ EV+ +
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRS-GWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
M + +I+ + G+ A +F+ E + T ++K L
Sbjct: 187 FCKMPFRGF--SQDAVSYAALIEGFCEAGRIDEALELFR----EMTQPDMYTHAALVKGL 240
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
GR +E + + + E G Y A V++ C+E + EE +L ++ + G +PC
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV 300
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + V + C +G+ + ++ KG + + +++++ +C+ ++ KA+AL +
Sbjct: 301 VTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQ 360
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKE 409
+ + DV TY++L+ G DG + A R+ M+ + + ++ +++ LC +
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +A D + G +P+ T+ VI+G
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 174/425 (40%), Gaps = 57/425 (13%)
Query: 8 RDSQSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R DA+S +++ + G + LE++R M P + AL+ L
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEE 248
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVMY-NLVID 120
C+ M G P ++ + + CR K E ++ + DSG+ V+ +V++
Sbjct: 249 GLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVN 308
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVE 176
Y ++G A R+ E + P TY++I+ G + Y+ + D++ VE
Sbjct: 309 AYCREGRMSGAV-RVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE 367
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
++ + L I+ G +A + + + T ++ AL K G+V
Sbjct: 368 PDVVTYNLL------IRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA ++ + RGI + +N LCK + + C L +++ GY P S F
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481
Query: 297 VASQCGKGKWKE----VEELL-----------SAVLDK--------------GLLLDSFC 327
+ + C +E ++E+L + V+++ G ++ C
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541
Query: 328 CSSLMEY------YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
++ Y YC+ ++D+A + +++K + +D Y+ L+DG G+ + AV
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVT 601
Query: 382 IFDYM 386
I +M
Sbjct: 602 ILKHM 606
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 176/455 (38%), Gaps = 60/455 (13%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P V C +++A R+ + A ++ +M G PN +T++ + Q C +GK
Sbjct: 295 GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA 354
Query: 102 LGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ LLD G+ V+ YNL+I G G+AF RL + G L TY+ ++D
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF-RLLRLMEGNGLAADQYTYNVLID 413
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
+ K + + + + + + P VI L GK A +
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT--VINGLCKAGKFDVACTFLENMISAGY 471
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ L K +E + + ++ + +Y +N L E
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
+ +V +G P + + V + C +G+ E E +++ + ++D+ ++L++ +
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591
Query: 337 SNRQIDKAIAL--------------------------------HIKIEKLKGSLDVA--- 361
S Q D+A+ + +K + ++++A
Sbjct: 592 SIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVF 651
Query: 362 ----------------TYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRL 404
TY +L+G ++ R++E + MKE + ++ + +V+
Sbjct: 652 ELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCF 711
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C L+ A M+ G P+ Y+ ++SG
Sbjct: 712 CKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGL 746
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/397 (18%), Positives = 151/397 (38%), Gaps = 61/397 (15%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
DGLE YR +R P N +++ L + + +A M+ G +P+ +T+S
Sbjct: 427 LFDGLE-YRGIR-----PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP 480
Query: 88 VAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVID---------------------- 120
+ LC++ + L +D + S+V Y +VI+
Sbjct: 481 FIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG 540
Query: 121 -------------FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVS 167
Y +G A + + EM R + + Y++++DG +T+ +
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMA-YNTLIDGHTSIGQTDRA 599
Query: 168 DRIVGLMVEKKLLPKHFL-----------SGNDYVIQKLSDMGKTYA-AEM--IFKRACD 213
I+ M +P HF ++V K + + KT A++ +F+
Sbjct: 600 VTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKK 659
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ T +L+ S+E R+ E + L+ E + + + Y A VN CK +
Sbjct: 660 NSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSD 719
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
LL ++ G++P + ++ +G+ +E+ + K D +++
Sbjct: 720 AWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIID 779
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+ D + +E++K TY +L + L
Sbjct: 780 GFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 176/421 (41%), Gaps = 30/421 (7%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + ++ + M+ + P +CN LL + + + M+ G P FT+
Sbjct: 39 GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTY 98
Query: 86 SLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKG---DFGAAFDRLNE 137
+++ +C+ G E GL + I +V YN +ID + K G D F+ + +
Sbjct: 99 NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 158
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
MC P TY+++++ ++ K M L P + S
Sbjct: 159 MC----CEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN---------VVSYST 205
Query: 198 MGKTYAAEMIFKRACDEKIELQ-------DDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+ + E + ++A ++++ + T ++ A K G + +A ++ + + + G
Sbjct: 206 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVG 265
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC-GKGKWKEV 309
+ Y A ++ LC P E LL ++VE + + C K K +
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAI 325
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ D GL ++ +++++ C Q++ A L ++ + D Y L+DG
Sbjct: 326 DYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDG 385
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
FK G + EA+ + D M E + + ++ +V L H +L+KA +EM+ G PD
Sbjct: 386 NFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445
Query: 429 E 429
E
Sbjct: 446 E 446
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 151/384 (39%), Gaps = 77/384 (20%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ G GLE +R M+ G P V + + L+DA ++ ++ A Y M R G
Sbjct: 171 LINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 230
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ PN++T Y +ID Y K G+ AF NE
Sbjct: 231 LVPNEYT------------------------------YTSLIDAYCKIGNLSDAFRLANE 260
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M + TY++++DG +E ++ MVE
Sbjct: 261 MLQ-VGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVE--------------------- 298
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS-ERGITVRDS 256
D K+ + T ++ L K V +AI + IS + G+ +
Sbjct: 299 --------------LDIKVTVV--TFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAA 342
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A ++ LCK +Q E L + ++G +P + + +G E L +
Sbjct: 343 IYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 402
Query: 317 LDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD--- 373
++ G+ LD +SL+ Q+ KA + +E++ G + +VL + K
Sbjct: 403 VETGMKLDLLAYTSLVWGLSHCNQLQKARSF---LEEMIGE-GIHPDEVLCISVLKKHYE 458
Query: 374 -GRMEEAVRIFDYMKELKVVSSSS 396
G + EAV + Y+ + ++++S +
Sbjct: 459 LGCINEAVELQSYLMKHQLLTSDN 482
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T M+ K GR+ + + + + + Y A +N CK + + R++
Sbjct: 132 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM 191
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P + S V + C +G ++ + + GL+ + + +SL++ YC +
Sbjct: 192 KRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNL 251
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIV 400
A L ++ ++ +V TY L+DGL E + + D M EL + V+ +F ++
Sbjct: 252 SDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVL 311
Query: 401 VSRLCHLKELRKAMKNHDEMLK-MGHKPDEATYKQVISGF 439
+ LC K + KA+ + G + + A Y +I G
Sbjct: 312 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 351
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G V+EAIQ + + + + ++ K + + V +D++ G P
Sbjct: 39 GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTY 98
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C +G + L + +GL+ D+ +S+++ + ++D + +++
Sbjct: 99 NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 158
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
+ DV TY+ L++ K G++ + + F MK + + S+ +V C +++
Sbjct: 159 MCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQ 218
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A+K + +M ++G P+E TY +I +
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAY 245
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
+ S ++D + +G+ ++ Y MR G VP +L+DA + + A L M
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDF 128
++ GV N T++ + LC L LLD + + V + ++ID K
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
A D + N L + Y++++DG + + E + + M +K L+P
Sbjct: 322 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVP 374
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 171/426 (40%), Gaps = 47/426 (11%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C +HK +V+ M G+ P + A ++L+D L + + A L MV G P
Sbjct: 209 CKAHK--VERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPP 266
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSV-----MYNLVIDFYSKKGDFGAAFDRL 135
++ + LC+ G+ + + + + Y+ ++ Y G AF +
Sbjct: 267 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVM 326
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
EM + R+ P +Y+ ++ + E ++++ MVEK P G +I
Sbjct: 327 EEMAD-RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG--IIIDNF 383
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G AA + + ++ ++ K R++EA+++Y I + GI
Sbjct: 384 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 443
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERG--YIPCAMELSRFVASQCGKGKWKEVEELL 313
Y +N LCK + +E LLR++ R P + S + G + +LL
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 503
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ ++D G++ D F +SL++ ++ +A+ L ++L G+F D
Sbjct: 504 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL--------------LEEMLKAGIFPD 549
Query: 374 GRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYK 433
++ +V LC ++ A EM++ GH P+E T+K
Sbjct: 550 --------------------DHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFK 588
Query: 434 QVISGF 439
V GF
Sbjct: 589 AVEKGF 594
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 186/416 (44%), Gaps = 25/416 (6%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
R M+ G + +L AL + ++ A + ++ + P FT++++ LC++
Sbjct: 152 REMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKA 211
Query: 96 GKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
K E + + I + Y+ +ID SK G A +L ++ R P
Sbjct: 212 HKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEA-RKLVDLMVARGPPPTAVA 270
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+SI+ G + + + + + + M ++L + + +++ MGK A + +
Sbjct: 271 YTSIVAGLCKCGRIQEAVKTIQEMRRRRL--RPRVDTYSFIVTGYIGMGKVEKAFAVMEE 328
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
D + ++AL GR +EA +++ + E+G Y ++ CKE
Sbjct: 329 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 388
Query: 271 PEEVCGLLRDVVERGYIPC----AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+LR + + P M + FV S + +E EL +L G+L +
Sbjct: 389 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS----RLEEALELYQRILKDGILPSTV 444
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD--VATYDVLLDGLFKDGRMEEAVRIFD 384
++++ C +++D+A+ L ++++ K L+ + TY +++ GL K G MEE R FD
Sbjct: 445 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVG-MEE--RAFD 501
Query: 385 YMKEL----KVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ E+ + ++ ++ L ++ +AM+ +EMLK G PD+ TY ++
Sbjct: 502 LLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 557
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 174/406 (42%), Gaps = 14/406 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
GF + N+LL AL R + A + + + + PN +++++ + FEVV
Sbjct: 91 GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVV 147
Query: 102 LGLL----DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
LL GI S+ + +++ + D A N + + P TY+ ++D
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNK-CEPTLFTYTVLVD 206
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + K E + + M+ K P + +I LS G+ A +
Sbjct: 207 GLCKAHKVERACDVFEEMIRKGYKPD--IIAYSSLIDGLSKAGRVDEARKLVDLMVARGP 264
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
++ L K GR++EA++ + R + R Y V + E+
Sbjct: 265 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFA 324
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
++ ++ +R P + + F+ + G+ +E E++ +++KG D +++ +C
Sbjct: 325 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 384
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSS 395
+ A + ++K + Y +++DG K R+EEA+ ++ +K+ + S+
Sbjct: 385 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 444
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGH--KPDEATYKQVISGF 439
++ V++ LC LK++ +A++ EM + +P TY +I G
Sbjct: 445 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 490
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 111/281 (39%), Gaps = 7/281 (2%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
D S ++ Y G V M P + ++ALY A ++
Sbjct: 304 DTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 363
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIY--SSVMYNLVIDFYSKKGD 127
MV G P+ T+ ++ C+ G VL L+D + +Y +++D + K
Sbjct: 364 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 423
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A + + + P TY+++++ + +K + + ++ M +K + +
Sbjct: 424 LEEALELYQRILKD-GILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 482
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L +G A + D + T +++ L+ G+V A+++ +
Sbjct: 483 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ GI D Y V +LC+ + LL++++ G+ P
Sbjct: 543 KAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTP 582
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHL-ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T +L AL + G + +A+ + ISE + S + + E V LLR+
Sbjct: 98 TRNSLLLALVRGGHLSDALGFFQSSISEPNV----SSFNILLRGFAARDDFEVVNALLRE 153
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ RG +++ C + + ++V F + L++ C +
Sbjct: 154 MKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHK 213
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVI 399
+++A + ++ + D+ Y L+DGL K GR++EA ++ D M ++ ++
Sbjct: 214 VERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTS 273
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+V+ LC +++A+K EM + +P TY +++G++
Sbjct: 274 IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYI 314
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 43/379 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D E++R MR G P V + L++ + ++ AS ++ MV +G++PN ++++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 90 QILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CRSG+ E LLD G++ ++V Y +ID Y K GD AF +EM + L
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGL 728
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y++++DG R E + I G KK N +I + GKT
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAPFN-ALINWVFKFGKTELK 785
Query: 205 EMIFKRACDEKIE----LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ R D + D T M+ L KEG ++ A +++H + + Y +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N K + E+ + + + G P + S +++A L +G
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV----------------IINAFLKEG 889
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + L++ + +D L I +T LL G K G ME A
Sbjct: 890 MTTKALV---LVDQMFAKNAVDDGCKLSI-----------STCRALLSGFAKVGEMEVAE 935
Query: 381 RIFDYMKELKVVSSSSFVI 399
++ + M L+ + S+ VI
Sbjct: 936 KVMENMVRLQYIPDSATVI 954
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 196/495 (39%), Gaps = 80/495 (16%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S +G+ ++ M G +P A +L++ R+ +R L M + + +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 83 FTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNE 137
+T+ V + +C SG + +V ++ SG +V +Y +I + + FG A L E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSG----- 187
M + + P Y+S++ G + ++ + + + MVE L P F+SG
Sbjct: 478 M-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 188 ----------------------------NDY-----VIQKLS------DMG-----KTYA 203
N+Y VI+ S D G KTY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 204 --------------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
AE IF+ + I + G ++ SK G +++A I+ + E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+T Y + C+ + E+ LL ++ +G P A+ + C G E
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L + KGL+ DSF ++L++ C +++AI + +K S A ++ L++
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINW 775
Query: 370 LFKDGRMEEAVRIFDYMKE-----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+FK G+ E + + + + + ++ I++ LC L A + +M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 425 HKPDEATYKQVISGF 439
P TY +++G+
Sbjct: 836 LMPTVITYTSLLNGY 850
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 22/255 (8%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + ++D Y G + ++ M++ G VP L+D R N++
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIY------SSVM 114
A ++G + G + + ++ + + + GK E+ VL L G + + V
Sbjct: 749 ERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRI 170
YN++ID+ K+G+ AA + ++M N NL P TY+S+L+G RR E V D
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNA-NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 171 VGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ +E P H + N ++ + ++ +M K A D+ +L TC +L
Sbjct: 867 IAAGIE----PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 228 KALSKEGRVKEAIQI 242
+K G ++ A ++
Sbjct: 923 SGFAKVGEMEVAEKV 937
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 176/440 (40%), Gaps = 50/440 (11%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
Q G+ ++ D Y KG + + V+ VP +S C LLDAL R N
Sbjct: 142 QEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR 201
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFY 122
+ L +Y MV V + T+ ++ CR+G V LG V++ +F
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN--VQLG-------KDVLFKTEKEFR 252
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ + A +L E + L P TY ++DG + ++ E + L+VE L
Sbjct: 253 TATLNVDGAL-KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK---SLLVEMDSLGV 308
Query: 183 HFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
L + Y +I L AA+ + I ++ C + +SKEG +++A
Sbjct: 309 S-LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + G+ + Y + + C+E + LL ++ +R + V
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G ++ ++ G + ++L++ + N + A+ + ++++ + D+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ L+ GL K RM+EA SF++ EM
Sbjct: 488 FCYNSLIIGLSKAKRMDEA---------------RSFLV-------------------EM 513
Query: 421 LKMGHKPDEATYKQVISGFM 440
++ G KP+ TY ISG++
Sbjct: 514 VENGLKPNAFTYGAFISGYI 533
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 158/412 (38%), Gaps = 46/412 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ + F D + V + M+ G P + N+L+ L + + A MV
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
+G+ PN FT+ + +F + V + + G+ + V+ +I+ Y KKG
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A M + + + TY+ +++G + +K + ++ I M K + P F G
Sbjct: 576 ACSAYRSMVD-QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG--V 632
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I S +G A IF +E + +L + G +++A ++ +S +G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP---------------------- 288
+ Y ++ CK E L ++ +G +P
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 289 ---------CAMELSRFVA-----SQCGKGKWKE--VEELLSAVLDKGLLLDSFCCSSLM 332
CA + F A + GK + K + L+ D+ + + ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+Y C ++ A L +++ V TY LL+G K GR E +FD
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 182/442 (41%), Gaps = 68/442 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ Y KG ++ YR M G + L++ L++ +++ A ++ M G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
++P+ F++ ++ + G + + D G+ +V+ YN+++ + + G+ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L+EM + + L P TY +I+DG + + R+ M K L+P F
Sbjct: 683 ELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF-------- 733
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
++ D L D V+ AI I+ +++G
Sbjct: 734 --------------VYTTLVDGCCRLND---------------VERAITIFG-TNKKGCA 763
Query: 253 VRDSDYYAFVNVLCK----EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + A +N + K E + E + L+ +R P + + + C +G +
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ-------IDKAIALHIKIEKLKGSLDVA 361
+EL + + L+ +SL+ Y + D+AIA I+ + +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI------- 876
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVV------SSSSFVIVVSRLCHLKELRKAMK 415
Y V+++ K+G +A+ + D M V S S+ ++S + E+ A K
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 416 NHDEMLKMGHKPDEATYKQVIS 437
+ M+++ + PD AT ++I+
Sbjct: 937 VMENMVRLQYIPDSATVIELIN 958
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 169/399 (42%), Gaps = 53/399 (13%)
Query: 37 MMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCR-- 94
MMR + +P +S+ N LL L + N LY M G+SP+ FT +++A LC
Sbjct: 81 MMRSHP-IPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLN 139
Query: 95 --SGKFEVVLGLLDSG-IYSSVMYNLVID-FYS--KKGDFGAAFDRLNEMCNGRNLTPGF 148
S + G+L G I V YN +I Y K G A + EM + + P
Sbjct: 140 RVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM-KAQGMIPNV 198
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT---YAAE 205
+YSS++ G K E S R+ MV++ + P L + +I L GK +A
Sbjct: 199 ISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPN--LVQFNVLIDILCKEGKIGDLSSAR 256
Query: 206 MIF----KRAC--------------------DEKIELQDD-----------TCGCMLKAL 230
+F + C +E + L ++ T +L L
Sbjct: 257 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGL 316
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
+ G+V +A +++ ++ GI+V Y F++ LCK E L ++ +
Sbjct: 317 LQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDF 376
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
SR + C GK + E + +GL + C+ ++ +C Q+DKA L K
Sbjct: 377 ESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEK 436
Query: 351 IEKLKG---SLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+EK++ + D+ TY+ LL G + ++EE V + M
Sbjct: 437 MEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 20/301 (6%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
E++ M+ G +P V + ++L+ ++ + L+ MV GV PN ++++ IL
Sbjct: 184 EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL 243
Query: 93 CRSGKF-------EVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN-GRN 143
C+ GK ++ L + G ++ + Y ++I+ Y K A + NEM G+
Sbjct: 244 CKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKR 303
Query: 144 LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI--QKLSDMGKT 201
P TYS++L G + K ++++ G+M + + YVI L G
Sbjct: 304 --PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGI----SVDSCIYVIFLDGLCKNGVL 357
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
+ A +F +L ++ ++ L K G+V+ A + + +S+ G+
Sbjct: 358 FEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIM 417
Query: 262 VNVLCKEHQPEEVCGL---LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
++ C+ Q ++ L + + E G P + + + C K +EV LL +
Sbjct: 418 IHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 477
Query: 319 K 319
+
Sbjct: 478 R 478
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L L+K + +Y+ + G++ N LC ++ E + ++ RG
Sbjct: 96 LLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRG 155
Query: 286 YIPCAMELSRFVASQ---CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
YIP + + + C G E +E+ + +G++ + SSL+ +C +++
Sbjct: 156 YIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLE 215
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR---MEEAVRIFDYMKELKVVSSS-SFV 398
++ L ++ ++ ++VL+D L K+G+ + A ++F M + S+
Sbjct: 216 ESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYT 275
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
I+++ C + ++ +AM ++EM ++G +P+ TY +++G +
Sbjct: 276 ILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLL 317
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 176/442 (39%), Gaps = 76/442 (17%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++ S D + +S V Y+ +GL DG C+ LL AL R
Sbjct: 164 LLVSAASTDDPAPLVSAVAKVYADEGLLPDG------------------CSLLLLALRRG 205
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWS-LVAQILCRSGKFEVVLGLLDSGIYSSV-MYNLV 118
+ + + WS L+ ++ + L LLD+G+ +N++
Sbjct: 206 IRVPMPA-----------------WSDLMNRLPSVPEAYAFYLHLLDAGVPPEARQFNML 248
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ + G +A + +EM R + P T+++++ G + ++ + GLM +
Sbjct: 249 MRDMIRSGKLASARNVFDEMLR-RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAG 307
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P + G IQ L G+ A +F+ C+ + ++ A KEG V
Sbjct: 308 IAPDVYTYG--AFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTA 365
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
+++ ++ RG+ Y A VN C+ +RD+
Sbjct: 366 GLELRWEMATRGVKADLVAYNALVNGFCR----------VRDM----------------- 398
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
K +++ + GL D ++L++ C ++D A+ + ++ +L
Sbjct: 399 --------KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 450
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
D TY L+ GL K GR +A RI M E + ++++ +V+ C +++ K+
Sbjct: 451 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 510
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G P TY V++GF
Sbjct: 511 KEMQNKGKNPGIVTYNVVMNGF 532
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ M G P V N L+ + + +++ A+ L G M + G++P+ +T+ Q L
Sbjct: 263 NVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 322
Query: 93 CRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++G+ + + + + G+ ++V+ +ID + K+GD A + EM R +
Sbjct: 323 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMAT-RGVKAD 381
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
Y+++++G R + ++ IV M + L P +I G+ A +
Sbjct: 382 LVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT--LIDGCCKEGELDTAMEM 439
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ DE + L D T ++ LSK GR +A +I + E G+ ++ Y ++ CK
Sbjct: 440 KQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCK 499
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ L+++ +G P + + + C G+ K + LL+A+L+ G+ +
Sbjct: 500 NGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDIT 559
Query: 328 CSSLMEYYCSNRQI 341
+ L++ +C + ++
Sbjct: 560 YNILLDGHCKHGKV 573
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 44/222 (19%)
Query: 3 QSCE-GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ CE G + + L+ ++D + +G GLE+ M G + A NAL++ R
Sbjct: 337 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 396
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----------LDSGIYS 111
+++ A+ + M +DG+ P+K T++ + C+ G+ + + + LD Y+
Sbjct: 397 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 456
Query: 112 SVM------------------------------YNLVIDFYSKKGDFGAAFDRLNEMCN- 140
+++ Y +VID + K GD F L EM N
Sbjct: 457 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 516
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
G+N PG TY+ +++G + + +D ++ M+ + P
Sbjct: 517 GKN--PGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPN 556
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 183/462 (39%), Gaps = 30/462 (6%)
Query: 1 MIQSCEGRDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALY 58
M + R+ D+ S +++D + G D +++ + G P+ A +L+ L
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSV 113
N A L+ M R G P+ T++++ C+ G E L+ D + V
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429
Query: 114 MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL---------DGARRYEKT 164
YN V+D K A NEM TP ++++I+ D A + K
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKL 488
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA----EMIFKRACDEKIELQD 220
+ + R++ M + +P + +I L + + A E + KR C + Q+
Sbjct: 489 DEAFRLLKRMTDDGHVPD--VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 546
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
++ L K GR+KEA ++ + G + Y V+ C+ Q E LL D
Sbjct: 547 T----LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+V RG P + + V+ C + E + + + G + F ++L+ +CS Q
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE---LKVVSSSSF 397
+D + L ++ S D Y L L K GR A+ I +E + +
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY 722
Query: 398 VIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V L ++ A+ +M++ G P +++G
Sbjct: 723 RFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 764
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 166/368 (45%), Gaps = 29/368 (7%)
Query: 100 VVLGLLDSG-------IYSS-------VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
V++GL+DSG +Y V N++++ + +G A + L M +
Sbjct: 186 VLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPD-EECA 244
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVG----LMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
P +Y ++LDG + + E + R+ G L G + VI L +
Sbjct: 245 PDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRI 304
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A +F++ + + + G ++ L+K G++ +A ++ + G+T Y +
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LC + ++ L D+ RG P + + + + C +G +E +L+ +++ G
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH 424
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD-------- 373
+ D +++M+ C + ++++A+ L ++E+L + + +++ ++ GL +
Sbjct: 425 VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 484
Query: 374 -GRMEEAVRIFDYMK-ELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
G+++EA R+ M + V ++ ++S LC + + A ++M+K KP T
Sbjct: 485 RGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 544
Query: 432 YKQVISGF 439
+I G
Sbjct: 545 QNTLIHGL 552
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 190/468 (40%), Gaps = 58/468 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + L+VYR R P + N LL+ + ++ A L AM + +P++ ++
Sbjct: 194 GRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSY 250
Query: 86 SLVAQILCRSGKFEVVLGLL-DSGIYSSVM----------YNLVIDFYSKKGDFGAAFDR 134
V LC++G+ E + L D + SS YN+VI + A
Sbjct: 251 CTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQM 310
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK--------HFL- 185
+M N RN++P +Y ++DG + K + + ++ + P H L
Sbjct: 311 FEKM-NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369
Query: 186 --SGNDYVIQKLSDMGK--------TYAAEM-------IFKRACDEKIELQDD------- 221
+ D + +DM + TY + + + ACD ++ +D
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG----- 276
T ++ L K RV+EA+ +++ + G T + + LC++ + ++ C
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489
Query: 277 ----LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
LL+ + + G++P + S ++ C + + LL ++ + ++L+
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C +I +A + + S DV TY+ L+ G + G+ E A + M +
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +VS LC L +A +M G P+ TY +I GF
Sbjct: 610 PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 657
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 195/505 (38%), Gaps = 86/505 (17%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
V+ + + G + ++++ +M P N L+D+L ++ E + MV G
Sbjct: 16 VIQGWCNVGRTFEAVKIFSLME-ECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRG 74
Query: 78 VSPNKFTWSLVAQILCRSGKF---EVVLGLLDSGIYSSVMYNLVIDFYSK----KGDFGA 130
P+ FT++ + LC++GK E+V+ + S + Y F + +G
Sbjct: 75 CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPP--YFATSSFLAHELCLRGSMER 132
Query: 131 AFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRI-----------VGLM- 174
AF L M + N+ ++ +D A +T RI VGLM
Sbjct: 133 AFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMD 192
Query: 175 ---------VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
V ++ + L + +++ G+ A + + DE+ + +
Sbjct: 193 SGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCT 252
Query: 226 MLKALSKEGRVKEA-----------------------------------------IQIYH 244
+L L K GRV+EA +Q++
Sbjct: 253 VLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFE 312
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++ER ++ Y ++ L K + + L + ++ G P + + + C
Sbjct: 313 KMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ + EL + + +G + +++ C +++A L K+ + DV TY+
Sbjct: 373 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVS---SSSFVIV-------VSRLCHLKELRKAM 414
++DGL K R+EEA+ +F+ M+ L S + +I+ + + C +L +A
Sbjct: 433 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAF 492
Query: 415 KNHDEMLKMGHKPDEATYKQVISGF 439
+ M GH PD TY +ISG
Sbjct: 493 RLLKRMTDDGHVPDVVTYSTLISGL 517
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 10/307 (3%)
Query: 19 LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGV 78
+D +G + + + M G VP V + L+ L + A L MV+
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFD 133
P T + + LC++G+ + +LD+ + S V YN ++ + + G A +
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
L++M R L P TY++++ G + + + + M P F +I
Sbjct: 599 LLSDMV-ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY--TALIL 655
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE--RGI 251
G+ +F I G + L K GR A++I E R
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 715
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
D Y V+ L + + E G +RD+V G +P + VA C G+ E
Sbjct: 716 AWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARA 775
Query: 312 LLSAVLD 318
+L ++D
Sbjct: 776 VLEEIMD 782
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 194/461 (42%), Gaps = 57/461 (12%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G+ + + + M + P +CNA L L + + L++ + MV G++ + FT+
Sbjct: 196 GMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTY 255
Query: 86 SLVAQILCRSGKFEVV----------------------------LGLLDSGI-------- 109
+++ +C+ G LGLLD
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD 315
Query: 110 ----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
+ YN +I+ + K AF L+EM N L P TYS+++D K
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS-GLKPNVVTYSTLIDALC---KEH 371
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG--KTYAAEMIFKRACDEKIELQDD-- 221
+ + + +++ + + LS N++ L D Y ++ + + DE +++Q
Sbjct: 372 MLQQAIKFLLDMR---RVGLSPNEFTYTSLIDANCKAGYLSDAL--KLADEMLQVQVGFN 426
Query: 222 --TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
T +L L KEGR+ EA ++ + + G+T Y A V+ K + E LL+
Sbjct: 427 VVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLK 486
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ E+ P + + C + K +E E ++S + G+ +S + M+ Y
Sbjct: 487 EIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTG 546
Query: 340 QIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV- 398
+ +A+ L ++ L + + T+ VL+DGL K G +EEA+ F M + + ++ V
Sbjct: 547 KTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVC 606
Query: 399 -IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ LC + A K DEM PD+ Y +I G
Sbjct: 607 TALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 180/414 (43%), Gaps = 14/414 (3%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++C+ M+ G P V + L+DAL +++ ++ A M R G
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVG 387
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAF 132
+SPN+FT++ + C++G L L D + ++ V Y ++D K+G A
Sbjct: 388 LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAE 447
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
D M +TP TY++++ G + ++ E + ++ + EKK+ P L G +I
Sbjct: 448 DLFRAMIKA-GVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGT--II 504
Query: 193 QKLSDMGKTYAAEMIFK--RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
L K E + +AC I + A K G+ EA+ + + + G
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACG--IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLG 562
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL-SRFVASQCGKGKWKEV 309
+ V + ++ LCK+ EE + + P + + + + C +
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
++L + DK ++ D ++L++ ++ +A+ + ++ +L LD+ Y L+ G
Sbjct: 623 KKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWG 682
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLK 422
L + +++A + M +V I ++ + L + +A++ HDE+LK
Sbjct: 683 LSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK 736
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 39/346 (11%)
Query: 130 AAFDRLNEMCNGRNL-TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
FD + + RN+ PGF + ++ E + + M ++ PK S N
Sbjct: 163 PGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKA-RSCN 221
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ + +L+ GK + F+ I T M+ + KEG + A ++H + +
Sbjct: 222 AF-LYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQ 280
Query: 249 RGIT----------------------------VRDS-------DYYAFVNVLCKEHQPEE 273
G+T ++D Y A +N CK Q +
Sbjct: 281 MGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPK 340
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L ++ G P + S + + C + ++ + L + GL + F +SL++
Sbjct: 341 AFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLID 400
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C + A+ L ++ +++ +V TY LLDGL K+GRM EA +F M + V
Sbjct: 401 ANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTP 460
Query: 394 S-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++ +V K + A++ E+ + KPD Y +I G
Sbjct: 461 NLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWG 506
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 17/359 (4%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V + +D + E++LA + M RD + PN T++ + C++G EVV+ L
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220
Query: 105 LDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+ + V Y +ID + KKG+ A M R + P Y++I++G
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDR-VEPNSLVYTTIINGFF 279
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
+ ++ + + + M+ + + + ++ +I L +GK A I + EK +L
Sbjct: 280 QRGDSDNAMKFLAKMLNQGM--RLDITAYGVIISGLCGIGKLKEATEIVEDM--EKGDLV 335
Query: 220 DDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D M+ A K GR+K A+ +YH + ERG ++ + K Q E
Sbjct: 336 PDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISY 395
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
E+ + + + + C + + EVE L S + + GL+ D F +S + C
Sbjct: 396 F--CTEKAN---DVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
+ A L K+ + LD+ Y L+ GL G M EA ++FD M V S+
Sbjct: 451 QGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSA 509
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/367 (18%), Positives = 157/367 (42%), Gaps = 12/367 (3%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ L+ +R +P CN + L N L+ +V G +P++ +++ V
Sbjct: 4 EALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVV 63
Query: 90 QILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+C+ G+ + + ++ S G V+ YN +ID + + GD +A L +
Sbjct: 64 SFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGF 123
Query: 145 T--PGFSTYSSILDGARRYEKTEVSDRIVGLM-VEKKLLPKHFLSGNDYVIQKLSDMGKT 201
T P +++++ +G + K ++ D + M V K + ++ + + I G+
Sbjct: 124 TCKPDIVSFNTLFNG---FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTW-IDMFCKSGEL 179
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A F + + T C++ K G ++ + +Y + +++ Y A
Sbjct: 180 KLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTAL 239
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ CK+ + + G+ ++E P ++ + + +G + L+ +L++G+
Sbjct: 240 IDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD ++ C ++ +A + +EK D+ + +++ FK GRM+ AV
Sbjct: 300 RLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVN 359
Query: 382 IFDYMKE 388
++ + E
Sbjct: 360 MYHKLIE 366
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 136/348 (39%), Gaps = 44/348 (12%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S +D + G L+ + M+ P V L+D + ++ + LY M R
Sbjct: 167 STWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRR 226
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLG-----LLDSGIYSSVMYNLVIDFYSKKGDFGA 130
+S N T++ + C+ G+ + G L D +S++Y +I+ + ++GD
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDN 286
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEV------SDRIVGLMVEKKLL 180
A L +M N + + + Y I+ G + E TE+ D + +M+ ++
Sbjct: 287 AMKFLAKMLN-QGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMM 345
Query: 181 PKHFLSG------NDY-----------------VIQKLSDMGKTYAAEMIFKRACDEKIE 217
+F SG N Y +I ++ G+ + A F C EK
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF---CTEKA- 401
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
D ++ AL KE E +++ ISE G+ Y +++ LCK+ + L
Sbjct: 402 -NDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+V+ G + + KG E ++ +L G+ DS
Sbjct: 461 KTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDS 508
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/281 (18%), Positives = 104/281 (37%), Gaps = 73/281 (25%)
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
K G+VK A+ I H + G Y + ++ C+ C +L + C
Sbjct: 68 KLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKP 127
Query: 292 ELSRFVASQCGKGKWKEVEELL-----------SAVLDKGLLLDSFCCSS---------- 330
++ F G K K ++E+ V+ +D FC S
Sbjct: 128 DIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFN 187
Query: 331 ----------------LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
L++ YC ++ ++L+ ++ +++ SL+V TY L+DG K G
Sbjct: 188 CMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 375 RMEEAVRIFDYMKELKVVSSS------------------------------------SFV 398
M+ A ++ M E +V +S ++
Sbjct: 248 EMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++S LC + +L++A + ++M K PD + +++ +
Sbjct: 308 VIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAY 348
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 5/234 (2%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G + E+ M VP + +++A ++ ++ A +Y ++ G P+
Sbjct: 317 GKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
S + + ++G+ + + + VMY ++ID K+ DF +RL + L
Sbjct: 377 STMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDF-IEVERLFSKISEAGLV 435
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
P Y+S + G + + ++ MV++ L F +I L+ G A
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLF--AYTTLIYGLTSKGLMVEAR 493
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI--TVRDSD 257
+F + +++A KEG + A + + RG+ V D+D
Sbjct: 494 QVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLARAVSDAD 547
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 173/418 (41%), Gaps = 45/418 (10%)
Query: 30 DGLEVYRMM---RVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ LE+ MM +V P + + N +++ + + ++ A L+ M G+ PN T++
Sbjct: 184 EALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYT 243
Query: 87 LVAQILCRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
+V LC++ + G ++D G+ + V Y +I Y G + L EM +
Sbjct: 244 IVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM-SA 302
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
L P TY +LD + K + ++ M+ K + P + G ++ + G
Sbjct: 303 HGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYG--IILHGYATKGAL 360
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
I + A +K+ + EA+ I++ + ++G++ +Y
Sbjct: 361 SEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATL 420
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
++ LCK + ++ ++ G P + + V C KW++ EL ++++G+
Sbjct: 421 IDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGI 480
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
+ +++M C+ ++ KA L +E++ D+ +Y+ L+ G G+ +EA +
Sbjct: 481 HPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASK 540
Query: 382 IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ D M L +G KP+E TY ++ G+
Sbjct: 541 LLDIM----------------------------------LSVGLKPNECTYNTLLHGY 564
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/433 (17%), Positives = 180/433 (41%), Gaps = 13/433 (3%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S G + L+LD KG + +++ M G P VS +L + +
Sbjct: 301 SAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGAL 360
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLV 118
MV +G+SPN + +++V + + + + G+ +V+ Y +
Sbjct: 361 SEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATL 420
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
ID K G A + N+M N + P ++S++ G +K E + + MV +
Sbjct: 421 IDALCKLGRVDDAELKFNQMIN-EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD--TCGCMLKALSKEGRV 236
+ P + ++ L G+ A+ + E++ + D + +++ G+
Sbjct: 480 IHPNVVFF--NTIMCNLCTEGRVMKAQRLIDLM--ERVGTRPDIISYNALIRGHCLVGKT 535
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
EA ++ ++ G+ + Y ++ C++ + ++ + ++++ G P + +
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ ++ E +EL ++ G + + ++ N +D+A+ + +
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMK 415
+D+ T+++++ L KDGR E+A+ +F + +V +++ ++ L L +
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDG 715
Query: 416 NHDEMLKMGHKPD 428
EM K G P+
Sbjct: 716 MFSEMEKSGCAPN 728
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 171/420 (40%), Gaps = 51/420 (12%)
Query: 65 LASCLYGAMVRD---GVSPNKFTWSLVAQILCRSGKFE---------------------- 99
+ SC + M+RD V+P+ FT+S++ CR G+ E
Sbjct: 75 VVSC-FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVV 133
Query: 100 --VVLGLLDS-------GIY-----------SSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ GL D+ G+ + V YN ++ + + A + L+ M
Sbjct: 134 NRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMA 193
Query: 140 NG--RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
+G R+ P +Y+++++G + + + + M ++ + P + VI L
Sbjct: 194 DGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPN--VVTYTIVIDGLCK 251
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
AE +F++ D+ + T C++ G+ KE +++ +S G+
Sbjct: 252 AQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFT 311
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y ++ LCK+ + E L ++ +G P + KG E+ L ++
Sbjct: 312 YGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMV 371
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
G+ + + + + + I +A+ + K+ + S +V Y L+D L K GR++
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVD 431
Query: 378 EAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+A F+ M V + F +V LC + + KA + EM+ G P+ + ++
Sbjct: 432 DAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM 491
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 162/391 (41%), Gaps = 39/391 (9%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
++V ++ K + + ++++ MR G P V L+DAL + + A + M+
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVMY-NLVIDFYSKKGDFG 129
+GV+PN ++ + LC K+E + +++ GI+ +V++ N ++ +G
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH-----F 184
A RL ++ P +Y++++ G KT+ + +++ +M+ L P
Sbjct: 502 KA-QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560
Query: 185 LSG--------NDY-VIQKLSDMGKTYAA-------EMIFK-RACDEKIELQDD------ 221
L G + Y V Q++ G T +FK R E EL +
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620
Query: 222 -----TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T +L LSK V EA++++ + + + V + + L K+ + E+
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + G +P + +G +E + + S + G +S + L+
Sbjct: 681 LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
I +A A KI++ SL+ +T +L+
Sbjct: 741 LRGDISRAGAYLSKIDEKNFSLEASTTSMLI 771
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 226 MLKALSKEGRVKEAIQIY-HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
+LK L RV EA+ + +SE G T Y + C E++ EE LL + +
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 285 GYIPCAMELSRFVASQCG---KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
C L + G +G+ + L + D+G+ + + +++ C + +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIV 400
D+A + ++ ++ TY L+ G G+ +E VR+ M + ++ ++
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC + +A K D M++ G KPD + Y ++ G+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGY 354
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 329 SSLMEYYCSNRQIDKAIAL-HIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDY 385
++L++ +C + ++A+ L H+ + S ++ +Y+ +++G F +G++++A +F
Sbjct: 170 NTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLD 229
Query: 386 MKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
M + + + ++ IV+ LC + + +A +M+ G +P+ TY +I G++
Sbjct: 230 MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYL 285
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 43/379 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D E++R MR G P V + L++ + ++ AS ++ MV +G++PN ++++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 90 QILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CRSG+ E LLD G++ ++V Y +ID Y K GD AF +EM + L
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGL 728
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y++++DG R E + I G KK N +I + GKT
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAPFN-ALINWVFKFGKTELK 785
Query: 205 EMIFKRACDEKIE----LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ R D + D T M+ L KEG ++ A +++H + + Y +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N K + E+ + + + G P + S +++A L +G
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV----------------IINAFLKEG 889
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + L++ + +D L I +T LL G K G ME A
Sbjct: 890 MTTKALV---LVDQMFAKNAVDDGCKLSI-----------STCRALLSGFAKVGEMEVAE 935
Query: 381 RIFDYMKELKVVSSSSFVI 399
++ + M L+ + S+ VI
Sbjct: 936 KVMENMVRLQYIPDSATVI 954
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 196/495 (39%), Gaps = 80/495 (16%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S +G+ ++ M G +P A +L++ R+ +R L M + + +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 83 FTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNE 137
+T+ V + +C SG + +V ++ SG +V +Y +I + + FG A L E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSG----- 187
M + + P Y+S++ G + ++ + + + MVE L P F+SG
Sbjct: 478 M-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 188 ----------------------------NDY-----VIQKLS------DMG-----KTYA 203
N+Y VI+ S D G KTY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 204 --------------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
AE IF+ + I + G ++ SK G +++A I+ + E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+T Y + C+ + E+ LL ++ +G P A+ + C G E
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L + KGL+ DSF ++L++ C +++AI + +K S A ++ L++
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINW 775
Query: 370 LFKDGRMEEAVRIFDYMKE-----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+FK G+ E + + + + + ++ I++ LC L A + +M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 425 HKPDEATYKQVISGF 439
P TY +++G+
Sbjct: 836 LMPTVITYTSLLNGY 850
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 22/255 (8%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + ++D Y G + ++ M++ G VP L+D R N++
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIY------SSVM 114
A ++G + G + + ++ + + + GK E+ VL L G + + V
Sbjct: 749 ERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRI 170
YN++ID+ K+G+ AA + ++M N NL P TY+S+L+G RR E V D
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNA-NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 171 VGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ +E P H + N ++ + ++ +M K A D+ +L TC +L
Sbjct: 867 IAAGIE----PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 228 KALSKEGRVKEAIQI 242
+K G ++ A ++
Sbjct: 923 SGFAKVGEMEVAEKV 937
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 176/440 (40%), Gaps = 50/440 (11%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
Q G+ ++ D Y KG + + V+ VP +S C LLDAL R N
Sbjct: 142 QEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR 201
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFY 122
+ L +Y MV V + T+ ++ CR+G V LG V++ +F
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN--VQLG-------KDVLFKTEKEFR 252
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ + A +L E + L P TY ++DG + ++ E + L+VE L
Sbjct: 253 TATLNVDGAL-KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK---SLLVEMDSLGV 308
Query: 183 HFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
L + Y +I L AA+ + I ++ C + +SKEG +++A
Sbjct: 309 S-LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
++ + G+ + Y + + C+E + LL ++ +R + V
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G ++ ++ G + ++L++ + N + A+ + ++++ + D+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 361 ATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEM 420
Y+ L+ GL K RM+EA SF++ EM
Sbjct: 488 FCYNSLIIGLSKAKRMDEA---------------RSFLV-------------------EM 513
Query: 421 LKMGHKPDEATYKQVISGFM 440
++ G KP+ TY ISG++
Sbjct: 514 VENGLKPNAFTYGAFISGYI 533
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 157/412 (38%), Gaps = 46/412 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ + F D + V + M+ G P + N+L+ L + + A MV
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
+G+ PN FT+ + +F + V + + G+ + V+ +I+ Y KK
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIE 575
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A M + + + TY+ +++G + +K + ++ I M K + P F G
Sbjct: 576 ACSAYRSMVD-QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG--V 632
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I S +G A IF +E + +L + G +++A ++ +S +G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP---------------------- 288
+ Y ++ CK E L ++ +G +P
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 289 ---------CAMELSRFVA-----SQCGKGKWKE--VEELLSAVLDKGLLLDSFCCSSLM 332
CA + F A + GK + K + L+ D+ + + ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+Y C ++ A L +++ V TY LL+G K GR E +FD
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 181/442 (40%), Gaps = 68/442 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ Y K ++ YR M G + L++ L++ +++ A ++ M G
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
++P+ F++ ++ + G + + D G+ +V+ YN+++ + + G+ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L+EM + + L P TY +I+DG + + R+ M K L+P F
Sbjct: 683 ELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF-------- 733
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
++ D L D V+ AI I+ +++G
Sbjct: 734 --------------VYTTLVDGCCRLND---------------VERAITIFG-TNKKGCA 763
Query: 253 VRDSDYYAFVNVLCK----EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + A +N + K E + E + L+ +R P + + + C +G +
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ-------IDKAIALHIKIEKLKGSLDVA 361
+EL + + L+ +SL+ Y + D+AIA I+ + +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI------- 876
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVV------SSSSFVIVVSRLCHLKELRKAMK 415
Y V+++ K+G +A+ + D M V S S+ ++S + E+ A K
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 416 NHDEMLKMGHKPDEATYKQVIS 437
+ M+++ + PD AT ++I+
Sbjct: 937 VMENMVRLQYIPDSATVIELIN 958
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 43/379 (11%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D E++R MR G P V + L++ + ++ AS ++ MV +G++PN ++++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 90 QILCRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
CRSG+ E LLD G++ ++V Y +ID Y K GD AF +EM + L
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGL 728
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
P Y++++DG R E + I G KK N +I + GKT
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAPFN-ALINWVFKFGKTELK 785
Query: 205 EMIFKRACDEKIE----LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
+ R D + D T M+ L KEG ++ A +++H + + Y +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+N K + E+ + + + G P + S +++A L +G
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV----------------IINAFLKEG 889
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + L++ + +D L I +T LL G K G ME A
Sbjct: 890 MTTKALV---LVDQMFAKNAVDDGCKLSI-----------STCRALLSGFAKVGEMEVAE 935
Query: 381 RIFDYMKELKVVSSSSFVI 399
++ + M L+ + S+ VI
Sbjct: 936 KVMENMVRLQYIPDSATVI 954
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 196/495 (39%), Gaps = 80/495 (16%)
Query: 23 SHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNK 82
S +G+ ++ M G +P A +L++ R+ +R L M + + +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 83 FTWSLVAQILCRSG----KFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNE 137
+T+ V + +C SG + +V ++ SG +V +Y +I + + FG A L E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH-----FLSG----- 187
M + + P Y+S++ G + ++ + + + MVE L P F+SG
Sbjct: 478 M-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 188 ----------------------------NDY-----VIQKLS------DMG-----KTYA 203
N+Y VI+ S D G KTY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 204 --------------AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
AE IF+ + I + G ++ SK G +++A I+ + E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+T Y + C+ + E+ LL ++ +G P A+ + C G E
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L + KGL+ DSF ++L++ C +++AI + +K S A ++ L++
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINW 775
Query: 370 LFKDGRMEEAVRIFDYMKE-----LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
+FK G+ E + + + + + ++ I++ LC L A + +M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 425 HKPDEATYKQVISGF 439
P TY +++G+
Sbjct: 836 LMPTVITYTSLLNGY 850
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 177/442 (40%), Gaps = 54/442 (12%)
Query: 3 QSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNE 62
Q G+ ++ D Y K + + V+ VP +S C LLDAL R N
Sbjct: 142 QEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR 201
Query: 63 IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFY 122
+ L +Y MV V + T+ ++ CR+G V LG V++ +F
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN--VQLG-------KDVLFKTEKEFR 252
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
+ + A +L E + L P TY ++DG + ++ E + L+VE
Sbjct: 253 TATLNVDGAL-KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK---SLLVE------ 302
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +G + L + T ++ L K A +
Sbjct: 303 ------------MDSLG----------------VSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
H + GI ++ Y + V+ KE E+ L ++ G IP A + + C
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+ ++ ELL + + +++ + ++++ CS+ +D A + ++ +V
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS----SSFVIVVSRLCHLKELRKAMKNHD 418
Y L+ ++ R +A+R+ MKE + +S +I +S+ + E R +
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV--- 511
Query: 419 EMLKMGHKPDEATYKQVISGFM 440
EM++ G KP+ TY ISG++
Sbjct: 512 EMVENGLKPNAFTYGAFISGYI 533
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 22/255 (8%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI 63
S +G + ++D Y G + ++ M++ G VP L+D R N++
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 64 RLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV---VLGLLDSGIY------SSVM 114
A ++G + G + + ++ + + + GK E+ VL L G + + V
Sbjct: 749 ERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRI 170
YN++ID+ K+G+ AA + ++M N NL P TY+S+L+G RR E V D
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNA-NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 171 VGLMVEKKLLPKHFLSG---NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCML 227
+ +E P H + N ++ + ++ +M K A D+ +L TC +L
Sbjct: 867 IAAGIE----PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 228 KALSKEGRVKEAIQI 242
+K G ++ A ++
Sbjct: 923 SGFAKVGEMEVAEKV 937
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 158/412 (38%), Gaps = 46/412 (11%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ + F D + V + M+ G P + N+L+ L + + A MV
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 76 DGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGA 130
+G+ PN FT+ + +F + V + + G+ + V+ +I+ Y KKG
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A M + + + TY+ +++G + +K + ++ I M K + P F G
Sbjct: 576 ACSAYRSMVD-QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG--V 632
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I S +G A IF +E + +L + G +++A ++ +S +G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP---------------------- 288
+ Y ++ CK E L ++ +G +P
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 289 ---------CAMELSRFVA-----SQCGKGKWKE--VEELLSAVLDKGLLLDSFCCSSLM 332
CA + F A + GK + K + L+ D+ + + ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+Y C ++ A L +++ V TY LL+G K GR E +FD
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 182/442 (41%), Gaps = 68/442 (15%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+++ Y KG ++ YR M G + L++ L++ +++ A ++ M G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGAAF 132
++P+ F++ ++ + G + + D G+ +V+ YN+++ + + G+ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L+EM + + L P TY +I+DG + + R+ M K L+P F
Sbjct: 683 ELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF-------- 733
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
++ D L D V+ AI I+ +++G
Sbjct: 734 --------------VYTTLVDGCCRLND---------------VERAITIFG-TNKKGCA 763
Query: 253 VRDSDYYAFVNVLCK----EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+ + A +N + K E + E + L+ +R P + + + C +G +
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ-------IDKAIALHIKIEKLKGSLDVA 361
+EL + + L+ +SL+ Y + D+AIA I+ + +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI------- 876
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVV------SSSSFVIVVSRLCHLKELRKAMK 415
Y V+++ K+G +A+ + D M V S S+ ++S + E+ A K
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 416 NHDEMLKMGHKPDEATYKQVIS 437
+ M+++ + PD AT ++I+
Sbjct: 937 VMENMVRLQYIPDSATVIELIN 958
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 166/427 (38%), Gaps = 59/427 (13%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
LE R + + P V N L+ L++ A L+ M V+P+ FT++ V
Sbjct: 81 ALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS 140
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-------VMYNLVIDF-YSKKGDFGAAFDRLNEMCNGR 142
LC+SG E LL+ I V YN +I+ K GD A + L+ M
Sbjct: 141 GLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGM-KLA 199
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
P TY+SI+ H L V++
Sbjct: 200 GPAPDVITYNSII---------------------------HALCVAGRVVE--------- 223
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
AAE++ +C + T +L K G + A+++ + I Y V
Sbjct: 224 AAEILKTMSCSPDLV----TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 279
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE---------ELL 313
N LC+ Q + LL ++V +GYIP + + V C G+ +E E+L
Sbjct: 280 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREIL 339
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ ++ ++ F + ++ + I KA++L + DV TY+ L+DGL K
Sbjct: 340 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 399
Query: 374 GRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATY 432
R+ EA + D M L + + VV LC + + A EM + H P+ Y
Sbjct: 400 NRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 459
Query: 433 KQVISGF 439
+I G
Sbjct: 460 TSLIDGL 466
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 129/327 (39%), Gaps = 29/327 (8%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
+E +++ P + N LLD + + A + M R+ + P+ T++++
Sbjct: 222 VEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 281
Query: 92 LCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR---- 142
LCR G+ +V LL+ I + Y ++D K G+ A + EM
Sbjct: 282 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAE 341
Query: 143 ----NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDM 198
N+ P TY+ +L G + + ++ +V + +P + + +I L
Sbjct: 342 MVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD--VVTYNTLIDGLCKA 399
Query: 199 GKTYAAEMIFKRACDEKIEL-------QDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ + ACD E+ D T G ++ L + GRV +A + +S +
Sbjct: 400 NRV-------REACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 452
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE 311
Y + ++ LCK + ++ C +L + +G + + S G+ E
Sbjct: 453 APNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMA 512
Query: 312 LLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+ ++ +G L D +L E SN
Sbjct: 513 MYDEMVARGFLPDGSTSKTLEEAAMSN 539
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 5/215 (2%)
Query: 230 LSKEGRVKEAIQIYHLISERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + R AIQ + E+ D Y +++L K + +D++ G P
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSP 60
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + C G+ E L A+ + + D + + L+ + D+A+ L
Sbjct: 61 NLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF 120
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV----IVVSRL 404
+E + + D+ TY+ ++ GL K G +E+A + + M S+ V ++ + +
Sbjct: 121 ENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGI 180
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C ++ +A++ D M G PD TY +I
Sbjct: 181 CKDGDVEEALEILDGMKLAGPAPDVITYNSIIHAL 215
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 151/357 (42%), Gaps = 8/357 (2%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
L M++ G +P V N L+ + + A L M G SP+K ++ V
Sbjct: 172 ALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMG 231
Query: 91 ILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
LC++ + V+ +++ + V YN +I K A L E R
Sbjct: 232 FLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLRE-AQKRGFQ 290
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAE 205
YS+I+D + + + + IV M + +P + +I S G+ A
Sbjct: 291 VDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPD--VVTYTAIINGFSQAGEVGQAR 348
Query: 206 MIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVL 265
+ ++ + + LK L ++G EA ++ E+ T Y ++
Sbjct: 349 KMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGF 408
Query: 266 CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDS 325
+E + + C ++R+++ +G+ P +E++ + S C G+ E ++ + L+ G +++
Sbjct: 409 RREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNA 468
Query: 326 FCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRI 382
++++ +C I+ A++L + D TY ++D L K GR+EEA +
Sbjct: 469 VNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATEL 525
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 10/277 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S+V+ + +G D +V R M GF P N LL +L R + A +
Sbjct: 402 SVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLN 461
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGA 130
G + N ++ V C+ E L LLD S +V Y +ID KKG
Sbjct: 462 MGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEE 521
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
A + +M + + P TY +++ RY + + ++ L+ +K L + + +
Sbjct: 522 ATELTLKMLK-KGIDPTPVTYRTVI---HRYGQIGRVEDLLNLL-DKMLTRQECRTAFNQ 576
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
VI+KL G AA+ + + + +TC ++++ ++G A ++ + R
Sbjct: 577 VIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRS 636
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI 287
+ L +E + EE L VERG I
Sbjct: 637 LIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNI 673
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 167/407 (41%), Gaps = 26/407 (6%)
Query: 2 IQSCEGRDSQSDAL--SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
++ + R Q D + S ++D Y +G E+ M G +P V A+++ +
Sbjct: 281 LREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQ 340
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVM 114
E+ A + M + G PN +++ + LC+ G ++ + +++
Sbjct: 341 AGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAIT 400
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y++V+ + ++G A D + EM G+ P + +L R + + + +
Sbjct: 401 YSVVMHGFRREGKLSDACDVVREMI-GKGFFPTPVEINLLLQSLCRIGRVDEAKKF---- 455
Query: 175 VEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSK 232
+E+ L ++ ++ VI + AA + T ++ AL K
Sbjct: 456 MEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGK 515
Query: 233 EGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME 292
+GR++EA ++ + ++GI Y ++ + + E++ LL ++ R C
Sbjct: 516 KGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQ--ECRTA 573
Query: 293 LSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL---HI 349
++ + C G + ++LL VL +D+ C LME Y + K I L +
Sbjct: 574 FNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESY-----LRKGIPLSAYKV 628
Query: 350 KIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
SL D+ + + L ++G+ EEA +F E +SS
Sbjct: 629 ACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISS 675
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 1/250 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
V+ S GK A + IE C + L +++A++ + G
Sbjct: 124 VMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLG 183
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
I Y + C H+ E+ L+ ++ +G P + + C + +EV
Sbjct: 184 IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+++ + D LL D ++L+ C ++ D+A+ + +K +D Y ++D
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSY 303
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+GRM++A I + M + ++ +++ E+ +A K +M K G KP+
Sbjct: 304 CKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNT 363
Query: 430 ATYKQVISGF 439
+Y + G
Sbjct: 364 VSYTAFLKGL 373
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/387 (18%), Positives = 149/387 (38%), Gaps = 44/387 (11%)
Query: 59 RQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM 114
R ++R A + M + G+ PN + +L + E L L+ GI +V+
Sbjct: 130 RAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVV 189
Query: 115 -YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I Y A + ++EM + +P +Y +++
Sbjct: 190 TYNCLIKGYCDLHRVEDAMELISEM-PLKGCSPDKVSYYTVMG----------------- 231
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
FL N + + + + ++ D K+ T ++ L K
Sbjct: 232 ----------FLCKNRRIREVMD----------VIEKMEDTKLLADQVTYNTLIHMLCKH 271
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
EA+Q +RG V Y A V+ CKE + ++ ++ ++ RG IP +
Sbjct: 272 QHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTY 331
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + G+ + ++L + G ++ ++ ++ C +A + E+
Sbjct: 332 TAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEE 391
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRK 412
+ + TY V++ G ++G++ +A + M + + +++ LC + + +
Sbjct: 392 QWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDE 451
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A K +E L MG + + VI F
Sbjct: 452 AKKFMEECLNMGCAVNAVNFTTVIHRF 478
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 194/456 (42%), Gaps = 48/456 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F + ++R M G P L+D+L + + L G MV GV + T+
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347
Query: 86 SLVAQILCRSGKFEVV-----LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ + L + GK + V L D+ + V Y ++ID K + A L EM
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM-E 406
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
++++P T+SS+++G + + + +M E+ + P G + G+
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT-LIDGFFKFQGQ 465
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
A E+ C E +++ ++ L + G+++EA+ ++ S G+++ +Y
Sbjct: 466 DAALEVYHDMLC-EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
++ L K +++++R +P A+ + F+ C GK+KE + L+ + + G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
L D ++++ +C + KA+ L +K+ +K +L TY+ L+ GLF G +E+
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL--ITYNTLVAGLFGTGAVEK 642
Query: 379 AVRIFDYM-------------KELKVVSSSS-----------------------FVIVVS 402
A + + M + L+ S S + ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
LC+ RKA +EML G PD T+ +I G
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 170/411 (41%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V M G V N L+ R ++ A + M GV PN T++
Sbjct: 189 LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVY 248
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
CR+ E L + + + V+ ++V + + G F A+ EM + P
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM-DKVGAAP 307
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY +++D + + + ++G MV + ++ L ++ L GKT +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD--LVTYTALMDWLGKQGKTDEVKD 365
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ A + + T ++ AL K V EA Q+ + E+ I+ + + +N
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K ++ R + ERG P + + E+ +L +G+ ++ F
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKF 485
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SL+ N +I++A+AL SLD Y L+DGLFK G M A + +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ + + + ++ LC L + ++A EM MG KPD++TY +I
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 178/432 (41%), Gaps = 11/432 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S V++ + +GL E RMM+ G P V L+D ++ A +Y M+
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFG 129
+GV NKF + L ++GK E + L SG+ V Y +ID K GD
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF E+ + RN+ P Y+ ++ K + + + M L P S +
Sbjct: 537 TAFKFGQELMD-RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ--STYN 593
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G+T A + I+ T ++ L G V++A + + +
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + + + + + + + + ++ G + + C G ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D+ ++L+ +C + +D A A + ++ S ++AT++ LL G
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK--AMKNHDEMLKMGHKP 427
L GR+ EA + M E + ++ + H K+ K AM+ + EM+ G P
Sbjct: 774 LESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 428 DEATYKQVISGF 439
+TY +IS F
Sbjct: 833 KVSTYNALISDF 844
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 142/349 (40%), Gaps = 8/349 (2%)
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
CR + LL S ++V YN+++ S D A L EMC R + T +
Sbjct: 84 CRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCK-RGVPFDGVTVN 139
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++L G R +V + P +G ++ ++ G T AA + R
Sbjct: 140 TLLAGLCR--NGQVDAAAALADRAGGITPWMSSAGTLSLLD-IAGFGDTPAALSVADRMT 196
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ + + ++ + G+V A + ++ E G+ + Y F+ C+ E
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E L +V G + + LS VA C G++ E L + G + +L+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY-MKELKV 391
+ + + ++L ++ +D+ TY L+D L K G+ +E + + +
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ ++ +++ LC + +A + EM + P+ T+ VI+GF+
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
V+EA +Y + G+ + A V LC++ + E L R++ + G P +
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA-----IALHIK 350
+ S G+ KE+ LL ++ +G+++D ++LM++ + D+ AL
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSRLCHLK 408
+ S + TY VL+D L K ++EA ++ M+E K +S + +F V++
Sbjct: 375 L-----SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE-KSISPNVVTFSSVINGFVKRG 428
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
L KA + M + G P+ TY +I GF
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 126/302 (41%), Gaps = 8/302 (2%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
KG L++ M++ P + N L+ L+ + A L MV G SP+ T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661
Query: 85 WSLVAQILCRSGKFEVVLG----LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMC 139
V Q +S + +V+L ++++G+++ + +YN ++ G A L EM
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
G + P T+++++ G + + + M+ + + P ++ + ++ L +G
Sbjct: 722 -GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN--IATFNTLLGGLESVG 778
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A + +E + T + K+ EA+++Y + +G + S Y
Sbjct: 779 RIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYN 838
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
A ++ K + L +D+ +RG P + V+ EV++ L + +K
Sbjct: 839 ALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEK 898
Query: 320 GL 321
G
Sbjct: 899 GF 900
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 179/412 (43%), Gaps = 46/412 (11%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G D + V M ++G V + ++ R+ ++ A + M + G++ + T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 85 WSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + LCR+G+ + V+ + D G+ +V Y ++ID Y K G AF N+M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
R +TP TY+++ DG L G
Sbjct: 453 QKR-VTPNVVTYTALSDG-------------------------------------LCKQG 474
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA + C + +EL T ++ L K G +++A++ + E G+ Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ LC+ + + LL++++++G P + + + C G+ + + LL +L+K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ ++ +SLM+ YC + + ++ + + + TY++L+ G K M+EA
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 380 VRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK--MGHKPD 428
+ M E +++SS+ ++ L K+ +A + ++M K + +PD
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 165/391 (42%), Gaps = 58/391 (14%)
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---------VVLGL-LDSGIY 110
+E+ A L M G+ N ++ V +LC G+ V+ G+ LD+ ++
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++VM + +KGD AA + +EM R L TY+++++G R + + ++R+
Sbjct: 359 TTVMSG-----FCRKGDLAAARNWFDEM-QKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 171 VGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+ M +K L + Y +I +GK A ++ + +++ T +
Sbjct: 413 LQEMEDKGL----DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K+G V A ++ H + +G+ + Y + +N LCK E+ + D+ E G P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C + LL +LDKG+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--------------------------- 561
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHL 407
+ TY+VL++G GR+E R+ ++M E + +++++ ++ + C
Sbjct: 562 --------KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
K ++ + + ML P+E TY +I G
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 190/471 (40%), Gaps = 82/471 (17%)
Query: 38 MRVYGFVPAVSACNA---------------------------LLDALYRQNEIRLASCL- 69
+R YG P+ +CNA LL AL I+ A L
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLF 276
Query: 70 -----------YGAMVRD--------------------GVSPNKFTWSLVAQILCRSGKF 98
YG MV G+ N ++ V +LC G+
Sbjct: 277 DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336
Query: 99 E---------VVLG-LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
V+ G +LD+ ++++VM + +KGD AA + +EM R L
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSG-----FCRKGDLAAARNWFDEM-QKRGLAADG 390
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEM 206
TY+++++G R + + ++R++ M +K L + Y +I +GK A +
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGL----DVDAVTYTVLIDGYCKVGKMTEAFL 446
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + +++ T + L K+G V A ++ H + +G+ + Y + +N LC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K E+ + D+ E G P + + + C + LL +LDKG+
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ LM +C + +++ L + + + TY+ L+ + M+ I+ M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+VV + +++ I++ C + +++A+ H EM++ G + ++Y +I
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 14/273 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++++D Y G + V+ M P V AL D L +Q ++
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVID 120
A+ L M G+ N FT++ + LC++G E ++ + ++G+ V Y +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A L EM + + + P TY+ +++G + E R++ M+EK +
Sbjct: 539 ALCQSKELDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597
Query: 181 PKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P + Y I+K +M T I+K +++ ++T ++K K +K
Sbjct: 598 PNTTTYNSLMKQYCIEK--NMKSTTE---IYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
EA+ + + E+G + S Y A + +L K+ +
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 6/262 (2%)
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKE 238
LP+ + +++ L G+ A +F DE D T G M+ ++
Sbjct: 248 LPEKNTCSYNILLKALCTAGRIKDAHQLF----DEMASPPDVVTYGIMVHGYCTLSELET 303
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AI++ ++ RG+ + Y + + +LC E Q + ++ D+V G + A + ++
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C KG + +GL D ++L+ C ++ +A + ++E +
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNH 417
D TY VL+DG K G+M EA + + M + +V + ++ + LC ++ A +
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G + + TY +I+G
Sbjct: 484 HEMCSKGLELNIFTYNSLINGL 505
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 198/467 (42%), Gaps = 48/467 (10%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
LS ++ G F + ++R M G P L+D+L + + L G MV
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVV-----LGLLDSGIYSSVMYNLVIDFYSKKGDFG 129
GV + T++ + L + GK + V L D+ + V Y ++ID K +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L EM ++++P T+SS+++G + + + +M E+ + P G
Sbjct: 397 EAEQVLLEM-EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT- 454
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+ G+ A E+ C E +++ ++ L + G+++EA+ ++ S
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLC-EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G+++ +Y ++ L K +++++R +P A+ + F+ C GK+KE
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL--HIKIEKLKGSLDVATYDVLL 367
+ L+ + + GL D ++++ +C + KA+ L +K+ +K +L TY+ L+
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL--ITYNTLV 631
Query: 368 DGLFKDGRMEEAVRIFDYM-------------KELKVVSSSS------------------ 396
GLF G +E+A + + M + L+ S S
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691
Query: 397 -----FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
+ ++ LC+ RKA +EML G PD T+ +I G
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 170/411 (41%), Gaps = 9/411 (2%)
Query: 32 LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQI 91
L V M G V N L+ R ++ A + M GV PN T++
Sbjct: 189 LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVY 248
Query: 92 LCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTP 146
CR+ E L + + + V+ ++V + + G F A+ EM + P
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM-DKVGAAP 307
Query: 147 GFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM 206
TY +++D + + + ++G MV + ++ L ++ L GKT +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD--LVTYTALMDWLGKQGKTDEVKD 365
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ A + + T ++ AL K V EA Q+ + E+ I+ + + +N
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K ++ R + ERG P + + E+ +L +G+ ++ F
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKF 485
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
SL+ N +I++A+AL SLD Y L+DGLFK G M A + +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545
Query: 387 KELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ ++ + + + ++ LC L + ++A EM MG KPD++TY +I
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 178/432 (41%), Gaps = 11/432 (2%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
S V++ + +GL E RMM+ G P V L+D ++ A +Y M+
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGI-YSSVMYNLVIDFYSKKGDFG 129
+GV NKF + L ++GK E + L SG+ V Y +ID K GD
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
AF E+ + RN+ P Y+ ++ K + + + M L P S +
Sbjct: 537 TAFKFGQELMD-RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ--STYN 593
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I G+T A + I+ T ++ L G V++A + + +
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G + + + + + + + + ++ G + + C G ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+L +L G+ D+ ++L+ +C + +D A A + ++ S ++AT++ LL G
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK--AMKNHDEMLKMGHKP 427
L GR+ EA + M E + ++ + H K+ K AM+ + EM+ G P
Sbjct: 774 LESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 428 DEATYKQVISGF 439
+TY +IS F
Sbjct: 833 KVSTYNALISDF 844
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 23/390 (5%)
Query: 8 RDSQSDALSLVLDCYSH--KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R +D SL YSH L + + R R P A N LL AL
Sbjct: 67 RFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH--- 118
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--SGIYS--SVMYNLVIDF 121
A + M + GV + T + + LCR+G+ + L D GI++ + +N +I
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAG 178
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
Y + GD AA + M + L Y++++ G R + + + ++ +M E + P
Sbjct: 179 YCRVGDTPAALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237
Query: 182 KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQ 241
+ + +++ G A ++ ++ + L T ++ L ++GR EA
Sbjct: 238 -NVATYTPFIVYYCRTKGVEEAFDL-YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA--S 299
++ + + G Y ++ L K + +E+ LL ++V RG + M+L + A
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV---MDLVTYTALMD 352
Query: 300 QCGK-GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
GK GK EV++ L L L + + L++ C +D+A + +++E+ S
Sbjct: 353 WLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISP 412
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
+V T+ +++G K G +++A MKE
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKE 442
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 20/355 (5%)
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
CR + LL S ++V YN+++ S D A L EMC R + T +
Sbjct: 84 CRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCK-RGVPFDGVTVN 139
Query: 153 SILDGARRYEKTE----VSDRIVGLMVEKKLLPKHFLS--GNDYVIQKLSDMGKTYAAEM 206
++L G R + + ++DR G+ H L G + +I +G T AA
Sbjct: 140 TLLAGLCRNGQVDAAAALADRGGGI---------HALDVIGWNTLIAGYCRVGDTPAALS 190
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ R + + + ++ + G+V A + ++ E G+ + Y F+ C
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
+ EE L +V G + + LS VA C G++ E L + G +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY- 385
+L++ + + ++L ++ +D+ TY L+D L K G+ +E +
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 386 MKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + + ++ +++ LC + +A + EM + P+ T+ VI+GF+
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 127/305 (41%), Gaps = 8/305 (2%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ KG L++ M++ P + N L+ L+ + A L MV G SP+
Sbjct: 599 HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPS 658
Query: 82 KFTWSLVAQILCRSGKFEVVLG----LLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
T V Q +S + +V+L ++++G+++ + +YN ++ G A L
Sbjct: 659 SLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE 718
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLS 196
EM G + P T+++++ G + + + M+ + + P ++ + ++ L
Sbjct: 719 EML-GSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN--IATFNTLLGGLE 775
Query: 197 DMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDS 256
+G+ A + +E + T + K+ EA+++Y + +G + S
Sbjct: 776 SVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835
Query: 257 DYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV 316
Y A ++ K + L +D+ +RG P + V+ EV++ L +
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895
Query: 317 LDKGL 321
+KG
Sbjct: 896 KEKGF 900
>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Brachypodium distachyon]
Length = 926
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 189/442 (42%), Gaps = 30/442 (6%)
Query: 19 LDCYSHK----GLFMDG-----LEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
LD Y++ GLF G E+Y+ M+ G P N ++ + + A L
Sbjct: 217 LDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMEL 276
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSS-VMYNLVIDFYSK 124
Y MVR GVSP+ ++++ LC+ GK ++ +L+ G++ V++ + F+ K
Sbjct: 277 YNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPK 336
Query: 125 KGDFGAAFDRLNEM----CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ L + C+G L SS+ G + ++R++ M+ LL
Sbjct: 337 GWEVVFVRKALKAVAKLDCSGELLE-----LSSLASGCSNMSLQQEAERLLDEMMRSNLL 391
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
P + N +I S+ G+ + + + E T ++K L ++ R+ +A
Sbjct: 392 PIDAIL-NMMIIAMCSE-GRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDAR 449
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQ 300
+ +L+ RG+ S V CK E L ++ + G P +A
Sbjct: 450 TLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACL 509
Query: 301 CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDV 360
C G +KE E L +++ GL+ D ++L+ Y + R A + E L+ L
Sbjct: 510 CRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAAC--RVFDEMLERGLQP 567
Query: 361 AT--YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKNH 417
+ Y L++GL KD ++ +A+ + M E + + + +++++ E +
Sbjct: 568 GSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLV 627
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
D M+K +PD TY +++G
Sbjct: 628 DLMMKNHVEPDLITYGALVTGI 649
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 175/400 (43%), Gaps = 16/400 (4%)
Query: 51 NALLDALYRQNEIRLASCLYGAM-VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLL 105
AL+ L ++ + LA ++ M V +G + + ++ + L G +E+ +
Sbjct: 187 TALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMK 246
Query: 106 DSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
D G+ + V YN+++ +Y K GAA + N M G ++P Y+ ++ + K
Sbjct: 247 DRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRG-GVSPDLRCYTMLMTSLCKEGKL 305
Query: 165 EVSDRIVGLMVEKKLLPKH--FLSGNDYVIQKLSDMGKTYAAEMIFKRACD-EKIELQDD 221
++++ M+E+ + P H F+S + + + A + + K C E +EL
Sbjct: 306 VEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSSL 365
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
GC +L +E A ++ + + D+ + +C E + + LL +
Sbjct: 366 ASGCSNMSLQQE-----AERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKL 420
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
V GY P + + + C + + + L++ + +G+ D S ++ YC I
Sbjct: 421 VAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDI 480
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIV 400
+ A++L ++ K +A YD ++ L + G +EA M E +V + +
Sbjct: 481 ESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTL 540
Query: 401 VSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ ++ + A + DEML+ G +P Y +I+G +
Sbjct: 541 LNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLV 580
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 26/303 (8%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS----GK 97
GF L++ +R+ E L L M+++ V P+ T+ + +CR+
Sbjct: 599 GFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDM 658
Query: 98 FEVVLGLLDSGIYSSVMYNLV--IDFYSKKGD-----------FGAAFDRLNEMCNGRNL 144
+ LD Y +++ L+ I F ++KG A + + ++ +
Sbjct: 659 RPSLAAKLDEARY--MLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVES-GM 715
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD--MGKTY 202
P Y+ +L+G R +K + + ++ LM + +LP H Y I +D +G +
Sbjct: 716 MPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHV----TYTILMNNDIRLGDSN 771
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
A +F + D +K LS R KEA+ + ++ +RG + Y +
Sbjct: 772 RAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIM 831
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
L E+ + + D+ GYIP S + +W+EV+ + +L+KG
Sbjct: 832 EQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKGRS 891
Query: 323 LDS 325
LD+
Sbjct: 892 LDT 894
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 166/447 (37%), Gaps = 54/447 (12%)
Query: 41 YGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEV 100
YG+ P+V N ++ L RQ + A L M GV P+ T S++ C+ G E
Sbjct: 423 YGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIES 482
Query: 101 VLGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
L L D G+ S+ +Y+ +I + G F A L +M L P Y+++L
Sbjct: 483 ALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEA-GLVPDEVIYTTLL 541
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
+G T+ + R+ M+E+ L P G +I L K A +R +E
Sbjct: 542 NGYSTMRHTKAACRVFDEMLERGLQPGSHAYGA--LINGLVKDNKIRKALHYLERMLEEG 599
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK-------- 267
Q ++ ++G + + L+ + + Y A V +C+
Sbjct: 600 FATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMR 659
Query: 268 -------------------------------------EHQPEEVCGLLRDVVERGYIPCA 290
E + + +++D+VE G +P
Sbjct: 660 PSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDL 719
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ + C K + LLS + G+L + + LM ++AI L
Sbjct: 720 HIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNS 779
Query: 351 IEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKE 409
+ D Y+ + GL R +EA+ F M++ V S +++ ++ +L
Sbjct: 780 LNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENS 839
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVI 436
A+ D+M G+ P + Y ++
Sbjct: 840 TDLALNIFDDMFCHGYIPRYSNYSSLL 866
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 164/405 (40%), Gaps = 49/405 (12%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D + +M+ G P +S + ++ A + +I A L+ M +DG+ P+ + +
Sbjct: 447 DARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSII 506
Query: 90 QILCRSGKFE----VVLGLLDSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR G F+ + ++++G+ V+Y +++ YS AA +EM R L
Sbjct: 507 ACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLE-RGL 565
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK----------LLPKHFLSGNDYVIQK 194
PG Y ++++G + K + + M+E+ L+ + F G +++
Sbjct: 566 QPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLD 625
Query: 195 LSDMGK---------TYAA------EMIFKRACDEKIELQDDTCGCML------------ 227
L D+ TY A I +R + + D ML
Sbjct: 626 LVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTR 685
Query: 228 ------KALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
K +S E ++ A I + E G+ Y +N LC+ + ++ LL +
Sbjct: 686 KGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLM 745
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+ G +P + + + + G +L +++ G + D ++ ++ R+
Sbjct: 746 EQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRT 805
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+A++ + ++K A YD +++ L + + A+ IFD M
Sbjct: 806 KEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDM 850
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 162/427 (37%), Gaps = 38/427 (8%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
SDAL + C+SH G L + + +VP+ ++ ALL A+ A+ +Y
Sbjct: 46 SDAL---VACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAM-------CAASMYS 95
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAA 131
+V V W L S ++ GL G +
Sbjct: 96 EVVDLFV-----LWEGAPSPLPVSKFPFLIHGLCSKGAVDKARF---------------- 134
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
L ++ G L P Y S++ + ++ +D + LMV+ + L +
Sbjct: 135 ---LFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMVKNGMYLDRMLGTA--L 189
Query: 192 IQKLSDMGKTYAAEMIFKRA-CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
++ L G+ A +F R +E +L M+ L + G V ++Y + +RG
Sbjct: 190 VKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRG 249
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y + CK L +V G P + + S C +GK E E
Sbjct: 250 MEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAE 309
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L + +L++G+ D S+ ++ ++ + KL S ++ L G
Sbjct: 310 QLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSSLASGC 369
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFV-IVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
+EA R+ D M ++ + + +++ +C L + D+++ G++P
Sbjct: 370 SNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSV 429
Query: 430 ATYKQVI 436
TY VI
Sbjct: 430 LTYNIVI 436
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 164/383 (42%), Gaps = 27/383 (7%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
+ + ++ M+ +P + +L+D L + + + A L M G+ P+ ++++++
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420
Query: 90 QILCRSGKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LC+ G+ E LL G + +V YN++I+ K FG A D ++M G+
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM-EGKGC 479
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL-----------------LPKHFLSG 187
P T+ +I+ ++ + +++I+ M+ + L + K +
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKP 539
Query: 188 NDYVIQKLSD----MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+ L D + + A+ +F + M+ L K+ V EA+ ++
Sbjct: 540 DVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLF 599
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ + + Y + ++ LCK H E LL+++ E G P + + C
Sbjct: 600 EEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKS 659
Query: 304 GKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
G+ + +E+ +L KG L+ ++++ C D+A+ L K+E D T+
Sbjct: 660 GRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTF 719
Query: 364 DVLLDGLFKDGRMEEAVRIFDYM 386
D+++ LF+ ++A +I M
Sbjct: 720 DIIIWALFEKDENDKAEKILXEM 742
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 184/466 (39%), Gaps = 54/466 (11%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+++++C+ H V + G+ P N L+ L + EI+ A + +
Sbjct: 100 TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV 159
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVI--------- 119
V G N+ ++ + LC++G+ + V LL S VMYN +I
Sbjct: 160 VAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL 219
Query: 120 ----DFYSK----------------------KGDFGAAFDRLNEMCNGRNLTPGFSTYSS 153
D YS+ G AF LNEM +N+ P T+++
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM-KLKNINPDVCTFNT 278
Query: 154 ILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACD 213
++D + K + + ++ +M++ + P + + +I + K A+ +F
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPD--VVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336
Query: 214 EKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ T M+ L KE V EA+ ++ + + + Y + ++ LCK H E
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER 396
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
L + + E+G P + + + C G+ + +E +L KG L+ + ++
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C +A+ L K+E D T+ ++ LF+ ++A +I M +
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQE 516
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+R LKE + + M K KPD TY ++ G+
Sbjct: 517 --------ARKVRLKEAKIVLA---VMTKACIKPDVVTYGTLMDGY 551
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 166/396 (41%), Gaps = 46/396 (11%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V N+L+D + N+++ A ++ +M + GV+PN T++ + LC+ + + L
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
+ Y +N+ P TY+S++DG +
Sbjct: 366 FEEMKY-------------------------------KNMIPDIVTYTSLIDGLCKNHHL 394
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E + + M E+ + P + ++ L G+ A+ F+R + L T
Sbjct: 395 ERAIALCKKMKEQGIQPDVY--SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYN 452
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
M+ L K EA+ + + +G + + L ++ + ++ +LR+++ R
Sbjct: 453 VMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR 512
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G + K + KE + +L+ + + D +LM+ Y ++ A
Sbjct: 513 GL------------QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHA 560
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSR 403
+ + ++ + +V Y +++DGL K ++EA+ +F+ MK + + ++ ++
Sbjct: 561 KYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDA 620
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC L +A+ EM + G +PD +Y ++ G
Sbjct: 621 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 133/340 (39%), Gaps = 29/340 (8%)
Query: 107 SGIYSSVMYNLVIDFYSKKGDFGAAFDR------LNEMCNGRNLTPGFSTYSSILDGARR 160
S + ++ Y VI + K GA D +N C+ ++T FS ++IL R
Sbjct: 71 SSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILK--RG 128
Query: 161 YEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQD 220
Y ++ + +I+ L G+ A + + +L
Sbjct: 129 YHPNAITL--------------------NTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQ 168
Query: 221 DTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
+ ++ L K G K ++ + + Y ++ LCK + C L +
Sbjct: 169 VSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSE 228
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
++ +G P + + V C G KE LL+ + K + D ++L++ +
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVI 399
+ A + + K DV TY+ L+DG F +++ A +F M + V + ++
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ LC K + +AM +EM PD TY +I G
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGL 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 87/216 (40%), Gaps = 3/216 (1%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L +L I ++ G T +N C +L ++++RG
Sbjct: 69 ILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRG 128
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
Y P A+ L+ + C +G+ K+ V+ +G L+ +L+ C +
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFVIVVSR 403
L K+E DV Y+ ++ L K+ + +A ++ M +K +S + ++ +V
Sbjct: 189 RLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI-VKGISPNVVTYNALVYG 247
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C + L++A +EM PD T+ +I
Sbjct: 248 FCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDAL 283
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 68/278 (24%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L+D + NE++ A ++ +M + GV+PN + C
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPN---------VQC----------- 578
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
Y ++ID KK A EM +N+ P TY+S++D +
Sbjct: 579 ----------YTIMIDGLCKKKTVDEAMSLFEEM-KHKNMFPNIVTYTSLIDALCKNHHL 627
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
E R + L+ E K +H + + Y L D
Sbjct: 628 E---RAIALLKEMK---EHGIQPDVYSYTILLD--------------------------- 654
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
L K GR++ A +I+ + +G + Y A +N LCK +E L + ++
Sbjct: 655 ----GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDK 710
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL 322
G +P A+ + + K + + E++L ++ +GL+
Sbjct: 711 GCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G ++++D K + + ++ M+ P + +L+DAL + + + A
Sbjct: 571 GVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA 630
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSV-MYNLVIDF 121
L M G+ P+ ++++++ LC+SG+ E+ LL G + +V +Y +I+
Sbjct: 631 IALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINE 690
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
K G F A D +M + P T+ I+ ++ + +++I+ M+ + L+
Sbjct: 691 LCKAGLFDEALDLQXKM-EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 162/373 (43%), Gaps = 27/373 (7%)
Query: 49 ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS---GKFEVVLGLL 105
A + ++D L + + A L M R GVS N ++ + R G+ + +L ++
Sbjct: 133 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 192
Query: 106 DS-GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEK 163
++ GI ++V Y +++D S D NEM N+ Y+++++ R
Sbjct: 193 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAVINAYCRAGN 251
Query: 164 TEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC 223
+ +++ V + P G +I+ +G+ AAEM+ + + L
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYG--VLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 309
Query: 224 GCMLKALSKEGRVKEAIQI---------------YHLIS----ERGITVRDSDYYAFVNV 264
M+ ++G V +A++I Y+ ++ G+ Y +++
Sbjct: 310 NTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISI 369
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
CK+ E L R++ E+G P + S + KG+ +E E + KG + D
Sbjct: 370 HCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPD 429
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +SL+ +C N ++D A+ L ++++ +V Y L+ GL K+GR E A +++D
Sbjct: 430 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 489
Query: 385 YMKELKVVSSSSF 397
M + ++ S
Sbjct: 490 DMLKAGLIPDDSL 502
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 34/288 (11%)
Query: 180 LPKHFLSGND---------YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
+P+H +S N YV QK D G+ + I + +E IE T ++ +L
Sbjct: 157 MPRHGVSLNALCYNSLLDCYVRQK--DDGRV---QEILEIMENEGIEATVGTYTILVDSL 211
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCA 290
S + + +++ + + Y A +N C+ +L + V G P
Sbjct: 212 STARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNE 271
Query: 291 MELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIK 350
+ C G+ + E LL+ + +G+ L+ +++++ YC +D A+ +
Sbjct: 272 RTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAA 331
Query: 351 IEKLKGSLDVATYDVLLDGLF-------------------KDGRMEEAVRIFDYMKELKV 391
+EK+ L++ TY+ L GL KDG M EA R+F M E
Sbjct: 332 MEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGA 391
Query: 392 VSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
S ++ +++ +R+A + EM K G PD TY ++ G
Sbjct: 392 TPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHG 439
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 281 VVERGYIPCAMELSRFVASQ-----CGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYY 335
++ER C +S F AS C G+ + LL + G+ L++ C +SL++ Y
Sbjct: 117 LLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCY 176
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS 395
+ + + +E V TY +L+D L + + +F+ MK VV
Sbjct: 177 VRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDV 236
Query: 396 S-FVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V++ C +R+A K DE + G +P+E TY +I GF
Sbjct: 237 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGF 281
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 161/382 (42%), Gaps = 55/382 (14%)
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAF 132
VSP F S+V LC+SG+ + LLD G+ +++ YN ++D Y ++ D G
Sbjct: 129 VSP--FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQ 186
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDG---ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ L M N + TY+ ++D AR K E L E K + + G+
Sbjct: 187 EILEIMEN-EGIEATVGTYTILVDSLSTARDISKVE------ALFNEMK---ANNVVGDV 236
Query: 190 Y----VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
Y VI G A + +E + T G ++K K G+++ A +
Sbjct: 237 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLAD 296
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAME-------LSRFVA 298
+ +G+ + + ++ C++ G++ D ++ I AME + +
Sbjct: 297 MQGQGVGLNQIIFNTMIDGYCRK-------GMVDDALK---IKAAMEKIGVELNIYTYNT 346
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
CG + G++ + ++L+ +C + + +A L ++ + +
Sbjct: 347 LACGLCRM-------------GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 393
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNH 417
V TY V++ G K GR+ EA R M++ V ++ +V C ++ A+K
Sbjct: 394 SVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLF 453
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+EM + G +P+ Y +ISG
Sbjct: 454 EEMKQRGTEPNVVAYTALISGL 475
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
N ++D R+ + A + AM + GV N +T++ +A LCR G +
Sbjct: 310 NTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGV-----------VP 358
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
+ V Y +I + K GD A EM + TP TYS ++ G + + ++R
Sbjct: 359 NYVTYTTLISIHCKDGDMVEARRLFREMAE-KGATPSVLTYSVMIHGYAKKGRIREAERF 417
Query: 171 VGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKAL 230
M +K +P + + ++ GK A +F+ E ++ L
Sbjct: 418 RKEMEKKGFVPDVYTYAS--LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGL 475
Query: 231 SKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+KEGR + A Q+Y + + G+ DS Y A V L +++
Sbjct: 476 AKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 515
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 34/300 (11%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
D+LS D + LF + M+ V V A+++A R +R A+ +
Sbjct: 209 DSLSTARDISKVEALFNE-------MKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 261
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGI-YSSVMYNLVIDFYSKKG- 126
V +GV PN+ T+ ++ + C+ G+ E LL G+ + +++N +ID Y +KG
Sbjct: 262 CVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGM 321
Query: 127 -----DFGAAFDRL---------NEMCNG---RNLTPGFSTYSSILDGARRYEKTEVSDR 169
AA +++ N + G + P + TY++++ + + R
Sbjct: 322 VDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARR 381
Query: 170 IVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLK 228
+ M EK P +I + G+ AE F++ ++K + D T ++
Sbjct: 382 LFREMAEKGATPSVLTY--SVMIHGYAKKGRIREAER-FRKEMEKKGFVPDVYTYASLVH 438
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
G+V A++++ + +RG Y A ++ L KE + E L D+++ G IP
Sbjct: 439 GHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIP 498
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ ++ + G ++ ++R M G P+V + ++ ++ IR A M +
Sbjct: 364 TTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEK 423
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGDFGA 130
G P+ +T++ + C +GK +V L L + G +V+ Y +I +K+G A
Sbjct: 424 KGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEA 483
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSIL 155
AF ++M L P S YS+++
Sbjct: 484 AFQLYDDMLKA-GLIPDDSLYSALV 507
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 10/301 (3%)
Query: 2 IQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVY--GFVPAVSACNALLDALYR 59
+ S RDS+ ++LD +G E + R +VP++ N LL+ +R
Sbjct: 204 LDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFR 263
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM- 114
+++ A L+ M R+ V P T+ + + CR + E + L+ GI +V+
Sbjct: 264 SRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIV 323
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
YN +ID ++ G F A + E C P STY+S++ G + + +++ +M
Sbjct: 324 YNPIIDSLAEAGRFKEAMGMM-ERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMM 382
Query: 175 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEG 234
+ + P L+ +Y + S GKT ++ + + T ++K + +E
Sbjct: 383 ISRGFDPT--LTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEE 440
Query: 235 RVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELS 294
R+ A+Q+ + RG + + V++LCK H+ EE D++ RG +P +
Sbjct: 441 RLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFE 500
Query: 295 R 295
R
Sbjct: 501 R 501
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 135/323 (41%), Gaps = 56/323 (17%)
Query: 85 WSLVAQIL---CRSGK-------FEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDR 134
WSL +L C+ G F+ GL S + S +YN++++ + + A ++
Sbjct: 214 WSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRA-EQ 272
Query: 135 LNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
L N+ P TY ++++G R ++E + +VG M K + P N V
Sbjct: 273 LWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEP------NVIVYNP 326
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH--LISERGIT 252
+ D +L++ GR KEA+ + L+SE G T
Sbjct: 327 IID-------------------------------SLAEAGRFKEAMGMMERCLVSETGPT 355
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA--SQCGKGKWKEVE 310
+ S Y + V CK +L+ ++ RG+ P + F S+CGK +E
Sbjct: 356 I--STYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKT--EEGM 411
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
L + +++ G D L++ C ++D A+ + ++ LD+AT +L+ L
Sbjct: 412 NLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLL 471
Query: 371 FKDGRMEEAVRIFDYMKELKVVS 393
K R+EEA F+ M +V
Sbjct: 472 CKMHRLEEAFAEFEDMIRRGIVP 494
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 321 LLLDSFCCSSLM----EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRM 376
+LLDS C + EY+ R +D + I++ Y+VLL+G F+ ++
Sbjct: 219 ILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRV-----------YNVLLNGWFRSRKL 267
Query: 377 EEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
+ A +++ MK V + ++ +V C ++ KA++ EM G +P+ Y +
Sbjct: 268 KRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPI 327
Query: 436 I 436
I
Sbjct: 328 I 328
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 179/412 (43%), Gaps = 46/412 (11%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G D + V M ++G V + ++ R+ ++ A + M + G++ + T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 85 WSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + LCR+G+ + V+ + D G+ +V Y ++ID Y K G AF N+M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
R +TP TY+++ DG L G
Sbjct: 453 QKR-VTPNVVTYTALSDG-------------------------------------LCKQG 474
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA + C + +EL T ++ L K G +++A++ + E G+ Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ LC+ + + LL++++++G P + + + C G+ + + LL +L+K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ ++ +SLM+ YC + + ++ + + + TY++L+ G K M+EA
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 380 VRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK--MGHKPD 428
+ M E +++SS+ ++ L K+ +A + ++M K + +PD
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPD 706
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 165/391 (42%), Gaps = 58/391 (14%)
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---------VVLGL-LDSGIY 110
+E+ A L M G+ N ++ V +LC G+ V+ G+ LD+ ++
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++VM + +KGD AA + +EM R L TY+++++G R + + ++R+
Sbjct: 359 TTVMSG-----FCRKGDLAAARNWFDEM-QKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 171 VGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+ M +K L + Y +I +GK A ++ + +++ T +
Sbjct: 413 LQEMEDKGL----DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K+G V A ++ H + +G+ + Y + +N LCK E+ + D+ E G P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C + LL +LDKG+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--------------------------- 561
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHL 407
+ TY+VL++G GR+E R+ ++M E + +++++ ++ + C
Sbjct: 562 --------KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
K ++ + + ML P+E TY +I G
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 190/471 (40%), Gaps = 82/471 (17%)
Query: 38 MRVYGFVPAVSACNA---------------------------LLDALYRQNEIRLASCL- 69
+R YG P+ +CNA LL AL I+ A L
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLF 276
Query: 70 -----------YGAMVRD--------------------GVSPNKFTWSLVAQILCRSGKF 98
YG MV G+ N ++ V +LC G+
Sbjct: 277 DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336
Query: 99 E---------VVLG-LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
V+ G +LD+ ++++VM + +KGD AA + +EM R L
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSG-----FCRKGDLAAARNWFDEM-QKRGLAADG 390
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEM 206
TY+++++G R + + ++R++ M +K L + Y +I +GK A +
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGL----DVDAVTYTVLIDGYCKVGKMTEAFL 446
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + +++ T + L K+G V A ++ H + +G+ + Y + +N LC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K E+ + D+ E G P + + + C + LL +LDKG+
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ LM +C + +++ L + + + TY+ L+ + M+ I+ M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+VV + +++ I++ C + +++A+ H EM++ G + ++Y +I
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 14/273 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++++D Y G + V+ M P V AL D L +Q ++
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVID 120
A+ L M G+ N FT++ + LC++G E ++ + ++G+ V Y +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A L EM + + + P TY+ +++G + E R++ M+EK +
Sbjct: 539 ALCQSKELDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597
Query: 181 PKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P + Y I+K +M T I+K +++ ++T ++K K +K
Sbjct: 598 PNTTTYNSLMKQYCIEK--NMKSTTE---IYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
EA+ + + E+G + S Y A + +L K+ +
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 6/262 (2%)
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKE 238
LP+ + +++ L G+ A +F DE D T G M+ ++
Sbjct: 248 LPEKNTCSYNILLKALCTAGRIKDAHQLF----DEMASPPDVVTYGIMVHGYCTLSELET 303
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
AI++ ++ RG+ + Y + + +LC E Q + ++ D+V G + A + ++
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
C KG + +GL D ++L+ C ++ +A + ++E +
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNH 417
D TY VL+DG K G+M EA + + M + +V + ++ + LC ++ A +
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G + + TY +I+G
Sbjct: 484 HEMCSKGLELNIFTYNSLINGL 505
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 53/404 (13%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
FM VY M P + L+D LY++ A ++ M G+SPN+ T++
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 87 LVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
++ LC+ G + L SG Y SV +N ++D + K G AF+ L +
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL-RLFEK 296
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK- 200
G YSS++DG R + + + M++K + P L +IQ LS GK
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILY--TILIQGLSKAGKI 354
Query: 201 ------------------TYAAEMIFKRAC-----DEKIELQ---------DDTCG--CM 226
TY + K C +E LQ D C +
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ ++ + G V+EA +I+ I + G + + + A ++ LCK + +E LL +E G
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA-RLLLHKMEVGR 473
Query: 287 IPCAMEL------SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
P ++ L +R + G + L+ D G D + L+ +C
Sbjct: 474 -PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 341 IDKAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF 383
ID A+ L + + +LKG S D TY+ L++GL + GR EEA ++F
Sbjct: 533 IDGALKL-LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 3/217 (1%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T G ++ L K+GR +A +++ ++ RGI+ Y ++ LC+ ++ L ++
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
G P ++ + + C G+ E ELL G +L SSL++ R+
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV--I 399
+A L+ + K D+ Y +L+ GL K G++E+A+++ M K +S ++
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS-KGISPDTYCYNA 378
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
V+ LC L + EM + PD T+ +I
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 179/452 (39%), Gaps = 47/452 (10%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S A + +LD + G ++ E+ R+ GFV + ++L+D L+R A
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDF 121
LY M++ + P+ ++++ Q L ++GK E L LL S GI YN VI
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
Query: 122 YSKKG----------------DFGAAFDRLNEMC----NG--------------RNLTPG 147
+G F A +C NG +P
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLM---VEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
+T+++++DG + + + + ++ M L + SGN + + G A
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR-SFDTMVESGSILKA 501
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
D + ++ + G + A+++ +++ +G++ Y +N
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
L + + EE L + + P + C K K L L K LD
Sbjct: 562 LHRVGREEEAFKLFYAKDDFRHSPAVYR--SLMTWSCRKRKVLVAFNLWMKYLKKISCLD 619
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ + + + + ++A+ I+++ K L + Y + L GL + GR EA+ +F
Sbjct: 620 DETANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFS 678
Query: 385 YMKELKV-VSSSSFVIVVSRLCHLKELRKAMK 415
++E K+ V+ S V ++ LC ++L A++
Sbjct: 679 VLREKKILVTPPSCVKLIHGLCKREQLDAAIE 710
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 128/287 (44%), Gaps = 4/287 (1%)
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
F AF NEM N +P T+ ++DG + +T + ++ M + + P
Sbjct: 179 FMLAFAVYNEMLKC-NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY- 236
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
+I L G A +F +L K GR+ EA ++ L
Sbjct: 237 -TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ G + Y + ++ L + + + L +++++ P + + + GK +
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 308 EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLL 367
+ +LLS++ KG+ D++C +++++ C +++ +L +++ + + D T+ +L+
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 368 DGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
+ ++G + EA IF +++ S ++F ++ LC EL++A
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 344 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVS 402
A A++ ++ K S ++ T+ +L+DGL+K GR +A ++FD M + + ++ I++S
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC A K EM G+ PD + ++ GF
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 53/364 (14%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM---------V 74
GL + E++ + G P+V+ NAL+D L + E++ A L M +
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 75 RDGVSPNKFTWSLV--AQILCRSGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAA 131
R S N+ ++V IL + + D+G ++ YN++I+ + + GD A
Sbjct: 480 RLSHSGNRSFDTMVESGSIL---KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGA 536
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIV--------------GLMVEK 177
LN + + L+P TY+++++G R + E + ++ LM
Sbjct: 537 LKLLN-VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWS 595
Query: 178 KLLPKHFLSGNDYV--IQKLSDMGKTYAAEM--IFK-----RACDEKIEL---QDD-TCG 224
K ++ N ++ ++K+S + A E+ FK RA IEL +D+ T G
Sbjct: 596 CRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLG 655
Query: 225 ---CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
L L + GR EA+ ++ ++ E+ I V ++ LCK Q + +
Sbjct: 656 PYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYT 715
Query: 282 VERGY--IP--CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ + +P C LS + S K + V +L + + G +DS +++Y+
Sbjct: 716 LDNNFKLMPRVCNYLLSSLLEST---EKMEIVSQLTNRMERAGYNVDSMLRFEILKYHRH 772
Query: 338 NRQI 341
+Q+
Sbjct: 773 RKQV 776
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 176/442 (39%), Gaps = 76/442 (17%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++ S D + +S V Y+ +GL DG C+ LL AL R
Sbjct: 36 LLVSAASTDDPAPLVSAVAKVYADEGLLPDG------------------CSLLLLALRRG 77
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWS-LVAQILCRSGKFEVVLGLLDSGIYSSV-MYNLV 118
+ + + WS L+ ++ + L LLD+G+ +N++
Sbjct: 78 IRVPMPA-----------------WSDLMNRLPSVPEAYAFYLHLLDAGVPPEARQFNML 120
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
+ + G +A + +EM R + P T+++++ G + ++ + GLM +
Sbjct: 121 MRDMIRSGKLASARNVFDEMLR-RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAG 179
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
+ P + G IQ L G+ A +F+ C+ + ++ A KEG V
Sbjct: 180 IAPDVYTYG--AFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTA 237
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
+++ ++ RG+ Y A VN C+ +RD+
Sbjct: 238 GLELRWEMATRGVKADLVAYNALVNGFCR----------VRDM----------------- 270
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
K +++ + GL D ++L++ C ++D A+ + ++ +L
Sbjct: 271 --------KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 322
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
D TY L+ GL K GR +A RI M E + ++++ +V+ C +++ K+
Sbjct: 323 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 382
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
EM G P TY V++GF
Sbjct: 383 KEMQNKGKNPGIVTYNVVMNGF 404
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
Query: 33 EVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V+ M G P V N L+ + + +++ A+ L G M + G++P+ +T+ Q L
Sbjct: 135 NVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 194
Query: 93 CRSGKFEVVLGLLDS----GIY-SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPG 147
C++G+ + + + + G+ ++V+ +ID + K+GD A + EM R +
Sbjct: 195 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMAT-RGVKAD 253
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMI 207
Y+++++G R + ++ IV M + L P +I G+ A +
Sbjct: 254 LVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT--LIDGCCKEGELDTAMEM 311
Query: 208 FKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCK 267
+ DE + L D T ++ LSK GR +A +I + E G+ ++ Y ++ CK
Sbjct: 312 KQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCK 371
Query: 268 EHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFC 327
+ L+++ +G P + + + C G+ K + LL+A+L+ G+ +
Sbjct: 372 NGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDIT 431
Query: 328 CSSLMEYYCSNRQI 341
+ L++ +C + ++
Sbjct: 432 YNILLDGHCKHGKV 445
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 44/222 (19%)
Query: 3 QSCE-GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN 61
+ CE G + + L+ ++D + +G GLE+ M G + A NAL++ R
Sbjct: 209 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 268
Query: 62 EIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----------LDSGIYS 111
+++ A+ + M +DG+ P+K T++ + C+ G+ + + + LD Y+
Sbjct: 269 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 328
Query: 112 SVM------------------------------YNLVIDFYSKKGDFGAAFDRLNEMCN- 140
+++ Y +VID + K GD F L EM N
Sbjct: 329 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 388
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
G+N PG TY+ +++G + + +D ++ M+ + P
Sbjct: 389 GKN--PGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPN 428
>gi|357483069|ref|XP_003611821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513156|gb|AES94779.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 170/404 (42%), Gaps = 75/404 (18%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
SD++ ++ YSH G +E + MR +G P N +L + + + LA LY
Sbjct: 84 SDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYT 143
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAA 131
M++ V PN +T YN++ID + K+G+ A
Sbjct: 144 TMLKSNVEPNFYT------------------------------YNMLIDGFCKRGEVKGA 173
Query: 132 FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYV 191
+ L+EM + P + +SIL G + + + ++
Sbjct: 174 QEMLDEM-KRVGIVPCVLSTTSILYGCCQANNVDEAHKL--------------------- 211
Query: 192 IQKLSDMGKT-YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+DM +T Y +MI +C +L K GR++EA+ +I G
Sbjct: 212 ---FNDMKETSYPPDMI--------------SCNVVLNGFCKMGRLEEALSFVWMIKNDG 254
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
++ + Y + +N K + E + + G +P + + + +G+ E
Sbjct: 255 FSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAA 314
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++L + GL DS+C +++++ C +++A +L ++I + +V T+ +L+ +
Sbjct: 315 KMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISE----HNVCTHTILICEM 370
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKA 413
K G + EA +F+ M++L S +F +++ LC K L KA
Sbjct: 371 CKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKA 414
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+++ S MG T A F R + IE +L+ + E ++ A+ +Y + +
Sbjct: 90 LVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSN 149
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ CK + + +L ++ G +PC + + + C E
Sbjct: 150 VEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAH 209
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
+L + + + D C+ ++ +C ++++A++ I+ SL+ +Y L++
Sbjct: 210 KLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAF 269
Query: 371 FKDGRMEEAVRIFDYM-KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
FK R EA + M KE V + I++ L + +A K +EM ++G PD
Sbjct: 270 FKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDS 329
Query: 430 ATYKQVISGF 439
Y VI G
Sbjct: 330 YCYNAVIQGL 339
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV-----NVLCKEHQPE 272
+ D+ ++++ S G ++AI+ + + E GI D+ Y + N E
Sbjct: 82 VTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEP-DAHMYNTILRDVLNEKLLELALA 140
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+L+ VE + M + F C +G+ K +E+L + G++ +S++
Sbjct: 141 LYTTMLKSNVEPNFYTYNMLIDGF----CKRGEVKGAQEMLDEMKRVGIVPCVLSTTSIL 196
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV- 391
C +D+A L +++ D+ + +V+L+G K GR+EEA+ +K
Sbjct: 197 YGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFS 256
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +S+ +++ + R+A + +M K G PD Y +I G
Sbjct: 257 LNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGL 304
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 164/372 (44%), Gaps = 45/372 (12%)
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY------SSVMYNLVIDFYSKKGDF 128
R G++P+K+T++ + C+ G+ E + + D + S+VMYN +I Y G
Sbjct: 176 RGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKL 235
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A +M R + +TY+ ++ L ++ + + +
Sbjct: 236 DVALQYREDMVQ-RGIAMTVATYNLLMHA---------------LFMDAR-------ASD 272
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
Y + L +M K + +F T ++ KEG K+A++++ +S+
Sbjct: 273 AYAV--LEEMQKNGFSPDVF-------------TYNILINGYCKEGNEKKALEVFEEMSQ 317
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+G+ Y + + V ++ Q +E L V++G P + + + S C G +
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
E+++ + K + D ++LM +C ++D+A L ++ K D+ +Y+ L+
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437
Query: 369 GLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G G +++A+R+ D M + + ++ ++ LC +++ A EM+ G P
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497
Query: 428 DEATYKQVISGF 439
D++TY +I G
Sbjct: 498 DDSTYISLIEGL 509
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK---- 97
G V+ N L+ AL+ A + M ++G SP+ FT++++ C+ G
Sbjct: 249 GIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKA 308
Query: 98 FEVVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
EV + G+ ++V Y +I +S+KG DRL + + + P Y+++++
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQET-DRLFNVAVKKGIRPDVVMYNALIN 367
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
E + I+ M EKK +P ++ N +++ +G+ A + I
Sbjct: 368 SHCTGGDMERAYEIMAEM-EKKRIPPDDMTYNT-LMRGFCLLGRLDEARTLIDEMTKRGI 425
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+ + ++ S +G +K+A+++ + ++G Y A + LCK Q ++
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAEN 485
Query: 277 LLRDVVERGYIP 288
L++++V +G P
Sbjct: 486 LMKEMVAKGITP 497
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+S KG + ++ + G P V NAL+++ ++ A + M + + P+
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPD 393
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFDRLN 136
T++ + + C G+ + L+D GI V YN +I YS KGD A +
Sbjct: 394 DMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRD 453
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
EM + + P TY++++ G + + + ++ ++ MV K + P
Sbjct: 454 EMMD-KGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYH-LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRD 280
T ++ L R KEA++++ +IS+ GI+ + +N C+ + E +L
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293
Query: 281 VVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQ 340
+ + G P S + C GK +E ++ V GL LD+ ++LM +C N +
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 341 IDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD-YMKELKVVSSSSFVI 399
D+A+ L +++ + D TY+V+L GL +GR EEA+++ D + E ++ S+ I
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 400 VVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+++ LC EL KA+K M + G P AT+ +++
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 146/365 (40%), Gaps = 49/365 (13%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLA-SCLYGAMVRDGVS 79
+S L +E++ +++V V P+++A + L+ L E+ L+ L A G+
Sbjct: 134 FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQ 193
Query: 80 PNKFTWSLVAQILCRSG----KFEVVLGLLDSGIY--SSVMYNLVIDFYSKKGDFGAAFD 133
PN ++++ + C++G F VV + SGI +S+ Y+ ++D A +
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
+M + ++P T++ +++G R + E + +I+ M + P + ++
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVY--NYSALMN 311
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCG----------------------------- 224
+GK A+ F +K L+ DT G
Sbjct: 312 GFCKVGKIQEAKQTFDEV--KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 225 --------CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
+L+ LS EGR +EA+Q+ G+ + Y +N LC + E+
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L + ERG P + V C G + +L L GL+ +++E C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 337 SNRQI 341
R++
Sbjct: 490 KERKL 494
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMV-RDGVSPNKFTWSLVAQILCRSGKFEVVLG 103
P + L+D L+ + + A L+ M+ ++G+SP+ T++++ CR+G+ E
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 104 LLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
+LD +G +V Y+ +++ + K G A +E+ L Y+++++
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV-KKTGLKLDTVGYTTLMNCF 348
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
R +T+ + +++G M + + +++ LS G++ A + + E + L
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTY--NVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+ +L AL G +++A++ ++SERGI + + V LC+ E +L
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
+ G IP V S C + K V ELL +++
Sbjct: 467 IGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 288 PCAMELSRFVASQCGKGKWKEVEELLSAVLDK-GLLLDSFCCSSLMEYYCSNRQIDKAIA 346
P ++ S + + KE EL ++ K G+ D + ++ +C ++++A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLC 405
+ ++K + +V Y L++G K G+++EA + FD +K+ + + + + +++ C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
E +AMK EM + D TY ++ G
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 193/464 (41%), Gaps = 66/464 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCY----SH-------------KGLFMDGLEVYRMMRVYGF 43
MIQ C +S AL + D + +H +G RMM G
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGI 480
Query: 44 VPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS----GKFE 99
P V N ++ A R + LA ++ M+ G+ PN FT+S++ ++ +E
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWE 540
Query: 100 VVLGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGA 158
V+ ++ S ++ V+YN +I+ K G A + L + + + G ++Y+SI+DG
Sbjct: 541 VINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGF 600
Query: 159 RRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
+ G T +A ++ + I
Sbjct: 601 FKE-------------------------------------GDTDSAVEAYREMSENGISP 623
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
T ++ K R+ A+++ H + + + + Y A ++ CK++ + L
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLF 683
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+++E G +P + ++ GK +L +++ G+ D F +++++ +
Sbjct: 684 SELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 339 RQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFV 398
+ A L+ ++ L D Y VL++GL K G+ VR ++E+K ++ V
Sbjct: 744 GNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQF---VRASKMLEEMKKKDATPNV 800
Query: 399 IVVSRLC--HLKE--LRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ S + H +E L +A + HDEML+ G D+ + ++SG
Sbjct: 801 LIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/503 (20%), Positives = 202/503 (40%), Gaps = 76/503 (15%)
Query: 10 SQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCL 69
SQ S+++ C +G + ++V M +G +V A +L+ NE+ A
Sbjct: 309 SQETYTSVIVACVK-EGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDF 367
Query: 70 YGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL------------------------- 104
+ M +G++P+K +S++ + C++ + E + +
Sbjct: 368 FNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK 427
Query: 105 --------------LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
++ I M N + K+G AA L M N + + P
Sbjct: 428 AESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMEN-KGIEPNVVF 486
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF-------------------------L 185
Y++++ R + +++ I M+EK L P +F +
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMI 546
Query: 186 SGN--------DYVIQKLSDMGKTYAAEMIFKRACDEK-IELQDDTCGCMLKALSKEGRV 236
+ N + +I L +G+T A+ + + EK + + ++ KEG
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDT 606
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
A++ Y +SE GI+ + + +N CK ++ + ++ ++ +
Sbjct: 607 DSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGAL 666
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ C K K L S +L+ GL+ + ++L+ + + ++D AI L+ K+
Sbjct: 667 IDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMK 415
S D+ TY ++DGL KDG + A ++ + L +V +V++V+ L + +A K
Sbjct: 727 SCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASK 786
Query: 416 NHDEMLKMGHKPDEATYKQVISG 438
+EM K P+ Y VI+G
Sbjct: 787 MLEEMKKKDATPNVLIYSTVIAG 809
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 179/448 (39%), Gaps = 36/448 (8%)
Query: 12 SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYG 71
S A + +L+ Y ++ + +M VP V N +L +L R N I A +Y
Sbjct: 169 SRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYN 228
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY-----SSVMYNLVIDFYSKKG 126
MV GV+ + T L+ + R K E + + + ++++L + K
Sbjct: 229 KMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMK 288
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDG----ARRYEKTEVSDRIVGLMVEKKLLPK 182
D A D L EM + TY+S++ E +V D +VG + ++
Sbjct: 289 DLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAA 348
Query: 183 H-----FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
F +GN ++GK A F R +E + M++ K ++
Sbjct: 349 TSLITGFCNGN--------ELGK---ALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEME 397
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A++IY + GI + + K PE + D E +I ++
Sbjct: 398 KAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFET-WIAHGFMCNKIF 456
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C +GK L + +KG+ + +++M +C + +D A ++ ++ +
Sbjct: 457 LLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQ 516
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKAMKN 416
+ TY +L+DG FK+ + A + + M ++ + +++ LC + + KA +
Sbjct: 517 PNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 417 HDEMLK-----MGHKPDEATYKQVISGF 439
++K MG +Y +I GF
Sbjct: 577 LQNLIKEKRYSMGC----TSYNSIIDGF 600
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 141/320 (44%), Gaps = 7/320 (2%)
Query: 84 TWSLVAQILCRSGK-FEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDF--GAAFDRLNEMC 139
W + LC G F V++ +L S ++ NL++ F S A + L +
Sbjct: 101 NWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFVSSNPTLIPSAMVNNLVDSS 160
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ ++ +L+ R + + + LMV++ ++P F+ + V+ L
Sbjct: 161 KRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVP--FVPYVNNVLSSLVRSN 218
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A+ I+ + + + T +++A +E + +EA++I+ + RG +
Sbjct: 219 LIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFS 278
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK-GKWKEVEELLSAVLD 318
V CK LLR++ E+G +P + E V C K G +E ++ ++
Sbjct: 279 LAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVG 338
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
G+ + +SL+ +C+ ++ KA+ ++E+ + D + V+++ K+ ME+
Sbjct: 339 FGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEK 398
Query: 379 AVRIFDYMKELKVVSSSSFV 398
AV I+ MK + + SS V
Sbjct: 399 AVEIYKRMKSVGIAPSSVLV 418
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 162/405 (40%), Gaps = 63/405 (15%)
Query: 79 SPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEM 138
+P ++V ++ S +F+ L SS +N +++ Y + A D N M
Sbjct: 144 NPTLIPSAMVNNLVDSSKRFDFEL--------SSRAFNYLLNAYIRNRRMDYAVDCFNLM 195
Query: 139 CNGRNLTPGFSTYSSILDGARRY----EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
+ RN+ P +++L R E E+ +++V + V +G++ Q
Sbjct: 196 VD-RNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGV----------AGDNVTTQL 244
Query: 195 LSDMG----KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
L K A IF+R E ++A K + A+ + + E+G
Sbjct: 245 LMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKG 304
Query: 251 ITVRDSDYYAFVNVLC-KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ Y V V C KE EE + ++V G + + + C + +
Sbjct: 305 GVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKA 364
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
+ + + ++GL D S ++E++C N +++KA+ ++ +++ + + ++ G
Sbjct: 365 LDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG 424
Query: 370 LFKDGRMEEAVRIFD----------YM---------KELKVVSSSSF------------V 398
K E A+ IF+ +M K+ KV +++SF V
Sbjct: 425 CLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNV 484
Query: 399 IVVSRL----CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + + C +K + A EML+ G +P+ TY +I GF
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGF 529
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 195/453 (43%), Gaps = 29/453 (6%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C GR + LSL++ ++ + D +V+ + G +S+CN LL L +++
Sbjct: 110 CVGRSAT--VLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLE 167
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---------VVLGLLDSGIYSSVM- 114
L+ + G SPN +T++++ C+ + ++ + + G +V+
Sbjct: 168 AVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVT 227
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y + I + G A++++ ++ N Y++++ G + + + + +++ M
Sbjct: 228 YGVYIHGLCRVGSIEDAWNKIQDL-RSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEM 286
Query: 175 VEKKLLPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALS 231
++ + P + + N + + + G EM C++K L C +L L
Sbjct: 287 KDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEM---EHCNKKPPLV--CCTSVLMGLR 341
Query: 232 KEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAM 291
+G V + + +H +S +G Y ++ K H + L+ ++ + G +P +
Sbjct: 342 TKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYI 401
Query: 292 ELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKI 351
+ C KG KE + +L GL D C+ +++ YCS Q ++A+ I I
Sbjct: 402 IYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEAL---IYI 458
Query: 352 EKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS--SSFVIVVSRLCH 406
++K + TY V+++ L K +E+A + M + + S I+
Sbjct: 459 NQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ 518
Query: 407 LKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
K KA K + +M K+G KPD T ++ F
Sbjct: 519 FKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMF 551
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/424 (19%), Positives = 171/424 (40%), Gaps = 45/424 (10%)
Query: 51 NALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIY 110
NAL+ ++ A L M +G+SP+ +++S++ C G E + L+ +
Sbjct: 264 NALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEH 323
Query: 111 SSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTE 165
+ LV + KG + +E+ + + +YS+++ G + +
Sbjct: 324 CNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHEL-SAKGYKHDLISYSTLIHGFLKGHNVK 382
Query: 166 VSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGC 225
++ +V M + L+P + + + +I++ G A F + ++ TC
Sbjct: 383 SANNLVHEMRKNGLVPDYIIYIS--LIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNH 440
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH---------------- 269
++ G+ +EA+ + + ++ I Y +N LCK
Sbjct: 441 IVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDN 500
Query: 270 --------------------QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
P + L R + + G P + L+ V +GK +
Sbjct: 501 IFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKA 560
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L + ++GL D F +++++ YC + +A +++ K+++ + +V TY L+DG
Sbjct: 561 LNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDG 620
Query: 370 LFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K R++ A + D MK V ++ +++ ++ + +A + DEM K G PD
Sbjct: 621 FCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPD 680
Query: 429 EATY 432
Y
Sbjct: 681 HIAY 684
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 111/249 (44%), Gaps = 18/249 (7%)
Query: 204 AEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVN 263
A+ +F +A +EL +C +LK L++ +++ ++ + G + Y +N
Sbjct: 134 AKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMIN 193
Query: 264 VLCKEHQP-----EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK----WKEVEELLS 314
CKE E+ +L ++ E+G P + ++ C G W ++++L S
Sbjct: 194 FYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRS 253
Query: 315 AVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
+ L+ +C ++L++ +C + D+A+ L +++ S D+ +Y +L++ +G
Sbjct: 254 S----NQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEG 309
Query: 375 RMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKE---LRKAMKNHDEMLKMGHKPDEAT 431
+E + + M+ V S L L+ + + E+ G+K D +
Sbjct: 310 DIESGMNLIQEMEHCN--KKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLIS 367
Query: 432 YKQVISGFM 440
Y +I GF+
Sbjct: 368 YSTLIHGFL 376
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 159/392 (40%), Gaps = 53/392 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN-EIRLASCLYGA 72
A S ++ Y GL + + V+ M+ YG P + NA++DA + E + + +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLVIDFYSK 124
M R+ V P++ T++ + + R G +E L D ++S YN ++D K
Sbjct: 330 MQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFS---YNTLLDAICK 386
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G AF+ L +M R + P +YS+++DG + K D + L E + L
Sbjct: 387 GGQMDLAFEILAQMPAKR-IMPNVVSYSTVIDG---FAKAGRFDEALNLFGEMRYL---- 438
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
I L + +L +K GR +EA+ I
Sbjct: 439 ------------------------------NIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
++ GI Y A + K+ + +EV + ++ +P + S + G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+KE E+ GL D S+L++ C N + A++L ++ K S +V TY+
Sbjct: 529 LYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS 396
++D + ME R DY + SSS
Sbjct: 589 SIIDAFGRSATME---RSADYSNGGSLPFSSS 617
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 166/408 (40%), Gaps = 44/408 (10%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G +P V NA++ L + ++ A + M G+ P+ T++ + C++G
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393
Query: 98 FEVVLGLL----DSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+ L L +G+ +V+ YN++ID Y + GD A RL E + P TY+
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEA-RRLKEEMVEQGCLPDVCTYT 452
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++ G+ ++ M+ K L P F + N + +L+
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCF-AYNTRIRAELT---------------- 495
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
L A++K R++E + + GI+ Y ++ LCK
Sbjct: 496 --------------LGAIAKAFRLREVMML------EGISSDTVTYNILIDGLCKTGNLN 535
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ L +V G P + + + + C +G +E + ++ GL + + +
Sbjct: 536 DAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFI 595
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
YC + A K+ + + TY+VL+ L + GR + A R F M E +V
Sbjct: 596 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLV 655
Query: 393 SSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ ++ +++ C AM+ + EM + G PD T+K + GF
Sbjct: 656 PNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 30/289 (10%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++++D Y G + + M G +P V L+ + + +A + M+
Sbjct: 417 NILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLS 476
Query: 76 DGVSPNKFTWS------LVAQILCRSGKFEVVLGLLDSGIYS-SVMYNLVIDFYSKKGDF 128
G+ P+ F ++ L + ++ + V+ L GI S +V YN++ID K G+
Sbjct: 477 KGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMML--EGISSDTVTYNILIDGLCKTGNL 534
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYS---------SILDGARRYEKTEVSDRIVGLMVEKKL 179
A D +M + L P TY+ +L AR++ K +SD + V +
Sbjct: 535 NDAKDLQMKMVHN-GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
I G Y+A F++ +E +E + T ++ AL + GR + A
Sbjct: 594 F-----------IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ +H + ERG+ Y ++ CKE E+ ++ + G P
Sbjct: 643 YRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHP 691
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 115/306 (37%), Gaps = 10/306 (3%)
Query: 11 QSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
Q D ++ +L+ Y G + L ++ +R G P V N L+D R ++ A
Sbjct: 375 QPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARR 434
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYS 123
L MV G P+ T++++ + + + D + + YN I
Sbjct: 435 LKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAEL 494
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
G AF RL E+ ++ TY+ ++DG + + + MV L P
Sbjct: 495 TLGAIAKAF-RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDC 553
Query: 184 FLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I + G A FK + + T + A + G + A +
Sbjct: 554 ITY--TCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWF 611
Query: 244 HLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGK 303
+ E G+ + Y ++ LC+ + + +++ERG +P + + C +
Sbjct: 612 RKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKE 671
Query: 304 GKWKEV 309
G W++
Sbjct: 672 GNWEDA 677
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 216 IELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVC 275
IE T +L + KEGR + + + RG +D NV+ +
Sbjct: 233 IEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTH--NVV--------IT 282
Query: 276 GLLR--DVVERGYIPCAMELSR---------FVASQCGKGKWKEVEELLSAVLDKGLLLD 324
GL R D+ E + M LS+ + KG K+ ++L + ++G++
Sbjct: 283 GLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPT 342
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
++++ + Q++ A +++ + DV TY+ LL+G K G ++EA+ +F
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402
Query: 385 YMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
++ + + ++ I++ C L +L +A + +EM++ G PD TY ++ G
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKG 457
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S + ++++D G D ++ M G P L+ A + +R
Sbjct: 512 EGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLRE 571
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSS-VMYNLVID 120
A + M+ DG++P+ T+++ CR G G +L+ G+ + + YN++I
Sbjct: 572 ARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 631
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
+ G A+ +EM R L P TY+ ++DG
Sbjct: 632 ALCRTGRTQLAYRHFHEMLE-RGLVPNKYTYTLLIDG 667
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 11 QSDALSLVLDCYSH--KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
Q D ++ ++H +GL + + ++ M G P+ + A R+ + A
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYG 609
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVL----GLLDSGIYSS-VMYNLVIDFYS 123
+ M+ +GV PN+ T++++ LCR+G+ ++ +L+ G+ + Y L+ID
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNC 669
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
K+G++ A EM + + P + T+ ++ G
Sbjct: 670 KEGNWEDAMRFYFEM-HQNGIHPDYLTHKALFKG 702
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
++ G P + +R + +W ++ + + +L G+ ++L++ +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249
Query: 338 NRQIDKAIALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS 394
+ DK +A+ +K + +GS + T++V++ GL + G +EEA + + M+ K SS
Sbjct: 250 EGRNDK-VAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASS 308
Query: 395 SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++ +++ L ++KA EM G P TY +I G +
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 179/412 (43%), Gaps = 46/412 (11%)
Query: 25 KGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
+G D + V M ++G V + ++ R+ ++ A + M + G++ + T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 85 WSLVAQILCRSGKFE----VVLGLLDSGI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMC 139
++ + LCR+G+ + V+ + D G+ +V Y ++ID Y K G AF N+M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
R +TP TY+++ DG L G
Sbjct: 453 QKR-VTPNVVTYTALSDG-------------------------------------LCKQG 474
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
AA + C + +EL T ++ L K G +++A++ + E G+ Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ LC+ + + LL++++++G P + + + C G+ + + LL +L+K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
+ ++ +SLM+ YC + + ++ + + + TY++L+ G K M+EA
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 380 VRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLK--MGHKPD 428
+ M E +++SS+ ++ L K+ +A + ++M K + +PD
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 165/391 (42%), Gaps = 58/391 (14%)
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE---------VVLGL-LDSGIY 110
+E+ A L M G+ N ++ V +LC G+ V+ G+ LD+ ++
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358
Query: 111 SSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRI 170
++VM + +KGD AA + +EM R L TY+++++G R + + ++R+
Sbjct: 359 TTVMSG-----FCRKGDLAAARNWFDEM-QKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 171 VGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
+ M +K L + Y +I +GK A ++ + +++ T +
Sbjct: 413 LQEMEDKGL----DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
L K+G V A ++ H + +G+ + Y + +N LCK E+ + D+ E G P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 289 CAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ + + C + LL +LDKG+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--------------------------- 561
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHL 407
+ TY+VL++G GR+E R+ ++M E + +++++ ++ + C
Sbjct: 562 --------KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 408 KELRKAMKNHDEMLKMGHKPDEATYKQVISG 438
K ++ + + ML P+E TY +I G
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 190/471 (40%), Gaps = 82/471 (17%)
Query: 38 MRVYGFVPAVSACNA---------------------------LLDALYRQNEIRLASCL- 69
+R YG P+ +CNA LL AL I+ A L
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLF 276
Query: 70 -----------YGAMVRD--------------------GVSPNKFTWSLVAQILCRSGKF 98
YG MV G+ N ++ V +LC G+
Sbjct: 277 DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336
Query: 99 E---------VVLG-LLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
V+ G +LD+ ++++VM + +KGD AA + +EM R L
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSG-----FCRKGDLAAARNWFDEM-QKRGLAADG 390
Query: 149 STYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEM 206
TY+++++G R + + ++R++ M +K L + Y +I +GK A +
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGL----DVDAVTYTVLIDGYCKVGKMTEAFL 446
Query: 207 IFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLC 266
+ + +++ T + L K+G V A ++ H + +G+ + Y + +N LC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506
Query: 267 KEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSF 326
K E+ + D+ E G P + + + C + LL +LDKG+
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566
Query: 327 CCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM 386
+ LM +C + +++ L + + + TY+ L+ + M+ I+ M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Query: 387 KELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+VV + +++ I++ C + +++A+ H EM++ G + ++Y +I
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 14/273 (5%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G D + ++++D Y G + V+ M P V AL D L +Q ++
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSV-MYNLVID 120
A+ L M G+ N FT++ + LC++G E ++ + ++G+ V Y +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ + A L EM + + + P TY+ +++G + E R++ M+EK +
Sbjct: 539 ALCQSKELDRAHSLLQEMLD-KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597
Query: 181 PKHFLSGN---DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVK 237
P + Y I+K +M T I+K +++ ++T ++K K +K
Sbjct: 598 PNTTTYNSLMKQYCIEK--NMKSTTE---IYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
EA+ + + E+G + S Y A + +L K+ +
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 9/274 (3%)
Query: 168 DRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-TCGCM 226
D V L E LP+ + +++ L G+ A +F DE D T G M
Sbjct: 239 DEAVQLFQE---LPEKNTCSYNILLKALCTAGRIKDAHQLF----DEMASPPDVVTYGIM 291
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGY 286
+ ++ AI++ ++ RG+ + Y + + +LC E Q + ++ D+V G
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+ A + ++ C KG + +GL D ++L+ C ++ +A
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLC 405
+ ++E +D TY VL+DG K G+M EA + + M + +V + ++ + LC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A + EM G + + TY +I+G
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 179/412 (43%), Gaps = 12/412 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
R MR G V L+ L E+ A L G M G+ PN +S + Q C+S
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 96 GKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G++E V + + + GI V MY +ID K G A ++ M R L P T
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVT 257
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+ +++ + + + ++ M EK + P + + +I+ LSD+ + A + +
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD--VVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 211 ACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
K ++ + T +++ L GR+++A Q+ ++ E G V Y + L +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
H+ + L+ ++ G P + S + C + E+LLS + D+G+ + F
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L+ C +++A L +++ LDV Y ++ G K G ++ A + + +
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ IV++ ++ A +M G PD A + +I G+
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 165/344 (47%), Gaps = 11/344 (3%)
Query: 104 LLDS--GIYSSVMYNLVIDFYSKKG--DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LLD+ + +V YN V+ ++G D A R + P +Y+ ++ R
Sbjct: 67 LLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM---R 123
Query: 160 RYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
++D+ VGL+ + + + +I+ L D + A + C+ IE
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 183
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+L+ K GR ++ +++ +SE+GI Y ++ LCK + ++ G++
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+V RG P + + + C +G KE +L + +KG+ D ++L++
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303
Query: 339 RQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSS 395
++D+A+ L ++ + K + +V T++ ++ GL GRM +A ++ M+E +V+
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ L + ++RKAM+ DEM +G +PD TY +I GF
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGF 407
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 177/415 (42%), Gaps = 16/415 (3%)
Query: 1 MIQSCE-GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
M + CE G + S +L Y G + D +V+ M G P V L+D+L +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM- 114
+ + A + MVR G+ PN T++++ +C+ G + +G+L + G+ V+
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT-PGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I S + A L EM G+N+ P T++S++ G + + ++ +
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M E + L + +I L + K A + +E T ++K K
Sbjct: 353 MEETGCMVN--LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
+V A + + +RGI Y + +C++ E L + ++ + +
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAY 469
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + C G K +ELL +++D+GL D+ S ++ + + ++ A + ++
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM------KELKVVSSSSFVIVVS 402
DVA +D L+ G G + + + + M + K++S+ S +V S
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 186/446 (41%), Gaps = 65/446 (14%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ ++ Y + + ++++RMM G + NA+L A+ + +A +Y AM+
Sbjct: 99 LAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMI 158
Query: 75 RDGVSP-----NKFTWSLVAQILCRSGKFEV-VLG-LLDSGIYSSV-MYNLVIDFYSKKG 126
DGV+P N W LC+ + V V G + G+ V YN +++ + + G
Sbjct: 159 ADGVAPDVSTYNTLIWGFG---LCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAG 215
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D +A +EM G +Y+ ++ G + E + + M EK L
Sbjct: 216 DLESARKVFDEMA-GEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGL------- 267
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+LS+ KT+AA + CD+ +GRV EA + +
Sbjct: 268 -------RLSE--KTFAA--LMPGLCDD------------------QGRVAEARKAVDDM 298
Query: 247 SERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR----FVASQC 301
+ER +T +D S + V LCK ++ G L + G + R + C
Sbjct: 299 AERRLTPKDKSVFLRLVTTLCKAG---DLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLC 355
Query: 302 GKGKWKEVEELLSAVLDKGLL-------LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
GK + E+L +++KG L L++ + ++E+ CSN KA ++ K
Sbjct: 356 AGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGSTAKAETFFRQLMK- 414
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKA 413
KG D A ++ L+ G K+G E A I M +V + S ++V E A
Sbjct: 415 KGVDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADA 474
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
D M++ GH P A +K V+
Sbjct: 475 KTALDSMMQQGHLPSPALFKSVMEAL 500
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 172/412 (41%), Gaps = 71/412 (17%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ V+ M+ +G P V+ N LL+A R ++ A ++ M +G N +++++ +
Sbjct: 185 AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIK 244
Query: 91 ILCRSGKFEVVLGL----------LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ E + L L ++++M L D +G A +++M
Sbjct: 245 GYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDD----QGRVAEARKAVDDMAE 300
Query: 141 GRNLTPGFSTY----------SSILDGA-----------------RRYE----------K 163
R LTP + + LDGA R+Y K
Sbjct: 301 -RRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGK 359
Query: 164 TEVSDRIVGLMVEKKLL--PKHFL---SGNDYVIQKLSDMGKTYAAEMIF----KRACDE 214
E + ++ ++EK L PK + S + VI+ L G T AE F K+ D+
Sbjct: 360 CETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGSTAKAETFFRQLMKKGVDD 419
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
K +++ +KEG + A +I +++ R + + V+ K+++P +
Sbjct: 420 KAAFN-----SLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADA 474
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++++G++P + + G+ + ++ ++++KG+ + ++E
Sbjct: 475 KTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEA 534
Query: 335 YCSNRQIDKAIA-LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ +++AI +++ +E G + D LL GL +GR+ EA ++ D+
Sbjct: 535 LFTRGHVEEAIGRVNLMVE--NGCM--PDLDKLLVGLCDNGRVMEAQKLADF 582
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 172/420 (40%), Gaps = 43/420 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F+ +V+ M G P AL+ R+ ++ L AM R G S + T
Sbjct: 52 GSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC 111
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
++V + LC G+F E +L++G +V+ Y ID K+ AF L EM
Sbjct: 112 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV- 170
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
GR L P T+++++DG + TE + R+ KL+ N +
Sbjct: 171 GRGLKPNVYTHTTLIDGLCKIGWTERAFRLF-----LKLIKSSSYKPNVH---------- 215
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
TY M+ +EG++ A + + E+G+ + Y
Sbjct: 216 TYTV---------------------MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 254
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ CK + L+ + + G++P + + C KGK +E ++L +G
Sbjct: 255 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 314
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D + L+ +C I A+ L ++ + D+ Y L+ + +MEE+
Sbjct: 315 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 374
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ FD + ++ + ++ +++ C + A++ + M++ G D TY +ISG
Sbjct: 375 KFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 434
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 183/434 (42%), Gaps = 23/434 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ KG F D E +R M G P V A +D L ++ ++ A + MV
Sbjct: 112 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 171
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
G+ PN +T + + LC+ G F + L L+ S Y + Y ++I Y ++G
Sbjct: 172 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 231
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L M + L P +TY++++ G + + + ++ M ++ LP + +
Sbjct: 232 RAEMLLVRMVE-QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY--N 288
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
VI GK A + + A + ++ T ++ K+G + A+ ++ + E
Sbjct: 289 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 348
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + ++ C++ Q EE + G +P + +A C G+
Sbjct: 349 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 408
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD---VATYDVL 366
+ ++ G DS +L+ C ++++A AL+ +G LD V
Sbjct: 409 LRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY------EGMLDKRLVPCEVTR 462
Query: 367 LDGLFKDGRMEE---AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+ F+ R E+ AV + D + + + V + +VV +L L ++ A ++L
Sbjct: 463 VTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVD--VVVRKLSALGDVDAASLFLKKVLDE 520
Query: 424 GHKPDEATYKQVIS 437
+ D ATY I+
Sbjct: 521 DYAVDHATYTGFIN 534
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 92/238 (38%), Gaps = 33/238 (13%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++ + ++ + G F E+ M+ GF+P + NA++D ++ +I+
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 302
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + G+ +K T++++ C+ G L L
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL--------------------- 341
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
FDR+ E NG P Y+S++ + + E S + + LLP
Sbjct: 342 ------FDRMVE--NG--CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK-- 389
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I +G++ A +F+R T G ++ L KE R++EA +Y
Sbjct: 390 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY 447
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 209/515 (40%), Gaps = 91/515 (17%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G + ++++ C S F + ++++ M VP V A N+L+D LY+ A
Sbjct: 470 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDF 121
++ + + P T++ + L R GK + V+ LL+ +S+ + YN ++D
Sbjct: 530 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 589
Query: 122 YSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP 181
K G A D L M + P S+Y++++ G + E+ + I M +K L+P
Sbjct: 590 LCKNGAVNDALDMLYSMTT-KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIP 647
Query: 182 KHFLSGNDY-----VIQKLSDMGKTYAAEMIFKRACDEKIELQD-DTCGCMLKALSKEGR 235
DY ++ +G A I K + D +C +++ + K+
Sbjct: 648 -------DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAG 700
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE---------------------- 273
++++I+ +I+ GIT+ D + LCK+ + E
Sbjct: 701 IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS 760
Query: 274 -VCGL----LRDVVERGY-----IPCAMELSRFVASQCGKGKWKEVEELLSA---VLDKG 320
+CGL L D+ E + + C + + GK +EE+L + KG
Sbjct: 761 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 820
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
++++ +R++++AI L+ + S TY LLDGL K GR+E+A
Sbjct: 821 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 880
Query: 381 RIFDYMKEL----------------KVVSSS--------------------SFVIVVSRL 404
+F+ M E ++ ++ S+ I++ L
Sbjct: 881 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 940
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
C +L + ++L+MG +PD TY +I G
Sbjct: 941 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 975
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/435 (19%), Positives = 184/435 (42%), Gaps = 18/435 (4%)
Query: 17 LVLDCYSHKGLFM---------DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLAS 67
+VL+ Y++ GL + LEVYR+M V G VP+V + L+ A ++ ++
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215
Query: 68 CLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM-YNLVIDFY 122
L M GV PN +++++ ++L ++ +F+ +L + G V+ + ++I
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275
Query: 123 SKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK 182
G A D +M + P TY ++LD ++ I M
Sbjct: 276 CDAGRISDAKDVFWKM-KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY--N 332
Query: 183 HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ VI L +G+ + A +F + I + + ++ K R +A+++
Sbjct: 333 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 392
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ + G + F+N K + + + +G +P + + +
Sbjct: 393 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 452
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
G+ + + + G+ D+ + +++ + D+A+ + + + DV
Sbjct: 453 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 512
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEML 421
+ L+D L+K GR +EA RIF +KE+ + + ++ +++ L ++++ M +EM
Sbjct: 513 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 572
Query: 422 KMGHKPDEATYKQVI 436
+ P+ TY ++
Sbjct: 573 HSNYPPNLITYNTIL 587
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 193/515 (37%), Gaps = 85/515 (16%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
+G + A + V+D G + LE++ M+ G VP + N+L+ + +
Sbjct: 328 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 387
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSG-------KFEVVLGLLDSGIYSSVMY-N 116
A L+ M G PN +T L +SG ++E+ + GI V+ N
Sbjct: 388 DALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYEL---MKSKGIVPDVVAGN 444
Query: 117 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVE 176
V+ +K G G A +E+ ++P TY+ ++ + K + + +I M+E
Sbjct: 445 AVLFGLAKSGRLGMAKRVFHEL-KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 503
Query: 177 KKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
+P L+ N +I L G+ A IF + + +E D T +L L +EG+V
Sbjct: 504 NNCVPD-VLAVNS-LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 561
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP-------- 288
KE + + + Y ++ LCK + +L + +G IP
Sbjct: 562 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 621
Query: 289 -----------------CAME---------LSRFVASQCGKGKWKEVEELLS-AVLDKGL 321
C M+ L + S G KE ++ L G
Sbjct: 622 IYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS 681
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIAL--------------------------------HI 349
D C SLME I+K+I H
Sbjct: 682 KTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHE 741
Query: 350 KIEKLKG---SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
++K K SL Y+ L+ GL + ++ A +F MKEL ++ +++ +
Sbjct: 742 LVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 801
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
+ + +K +EM + G++ TY +ISG +
Sbjct: 802 KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLV 836
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ L K R+++AI +Y+ + +G + Y ++ L K + E+ L ++
Sbjct: 827 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
+E G + + G ++V L ++D+G+ D + +++ C Q+
Sbjct: 887 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 946
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
+ + ++ ++ D+ TY++L+DGL K R+EEAV +F+ M++ +V +
Sbjct: 947 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV--PNLYTYN 1004
Query: 402 SRLCHLKELRKAM---KNHDEMLKMGHKPDEATYKQVISGF 439
S + HL + KA K ++E+L G KP+ TY +I G+
Sbjct: 1005 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1045
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/443 (19%), Positives = 184/443 (41%), Gaps = 52/443 (11%)
Query: 9 DSQSDALSLV--LDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
D + D ++ + LD + G +E++ M+ G+ V A A++DAL + + A
Sbjct: 295 DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEA 354
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD--------SGIYSSVMYNLV 118
++ M + G+ P +++++ + ++ +F L L Y+ V++
Sbjct: 355 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLF--- 411
Query: 119 IDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKK 178
I++Y K G+ + +RYE LM K
Sbjct: 412 INYYGKSGES--------------------------IKAIQRYE----------LMKSKG 435
Query: 179 LLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKE 238
++P ++GN V+ L+ G+ A+ +F + T M+K SK + E
Sbjct: 436 IVPD-VVAGNA-VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 493
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
A++I++ + E + ++ L K + +E + + E P + +A
Sbjct: 494 AVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLA 553
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
+GK KEV LL + + +++++ C N ++ A+ + +
Sbjct: 554 GLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP 613
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK-NH 417
D+++Y+ ++ GL K+ R EA IF MK++ + ++ ++ + +++A+
Sbjct: 614 DLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIK 673
Query: 418 DEMLKMGHKPDEATYKQVISGFM 440
D L+ G K D ++ ++ G +
Sbjct: 674 DYFLQPGSKTDRSSCHSLMEGIL 696
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 145/367 (39%), Gaps = 51/367 (13%)
Query: 29 MDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLV 88
++ E+ + + +G N+L+ L +N I +A L+ M G P++FT++L+
Sbjct: 737 LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 796
Query: 89 AQILCRSGKFEVVLGLLDS----GIYSS-VMYNLVIDFYSKKGDFGAAFD-RLNEMCNGR 142
+ +S + E +L + + G S+ V YN +I K A D N M G
Sbjct: 797 LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 856
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ TP TY +LDG + + E ++ + M+E
Sbjct: 857 SPTP--CTYGPLLDGLLKAGRIEDAENLFNEMLE-------------------------- 888
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
C + + +L G ++ ++ + ++GI Y +
Sbjct: 889 -------YGCKANCTIYN----ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 937
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEE---LLSAVLDK 319
+ LCK Q + R ++E G P + + + G GK K +EE L + + K
Sbjct: 938 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLID---GLGKSKRLEEAVSLFNEMQKK 994
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
G++ + + +SL+ + + +A ++ ++ +V TY+ L+ G G + A
Sbjct: 995 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1054
Query: 380 VRIFDYM 386
+ M
Sbjct: 1055 YAAYGRM 1061
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + + ++++D G DGL +R + G P + N L+D L + +
Sbjct: 924 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVID 120
A L+ M + G+ PN +T++ + L ++GK ++ LL G +V YN +I
Sbjct: 984 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1043
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTY 151
YS G +A+ M G L P STY
Sbjct: 1044 GYSVSGSTDSAYAAYGRMIVGGCL-PNSSTY 1073
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
+LD G D ++ M YG + N LL+ L+ MV G
Sbjct: 866 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 925
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLG----LLDSGIYSS-VMYNLVIDFYSKKGDFGAAF 132
++P+ +++++ LC++G+ L LL+ G+ + YNL+ID K A
Sbjct: 926 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 985
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
NEM + + P TY+S++ + K + ++ ++ K P F + +I
Sbjct: 986 SLFNEM-QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY--NALI 1042
Query: 193 QKLSDMGKTYAAEMIFKR 210
+ S G T +A + R
Sbjct: 1043 RGYSVSGSTDSAYAAYGR 1060
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 1/242 (0%)
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDY 258
G A E A ++ +C ML+ + GRV + +++ ++ + + +
Sbjct: 69 GPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTF 128
Query: 259 YAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD 318
A L E L + E G + A + V G +E E+ ++
Sbjct: 129 AAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMV 188
Query: 319 KGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEE 378
G++ S LM + R ++ + L ++E +V +Y + + L + R +E
Sbjct: 189 DGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDE 248
Query: 379 AVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVIS 437
A RI M+ + +++ LC + A +M K KPD TY ++
Sbjct: 249 AYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLD 308
Query: 438 GF 439
F
Sbjct: 309 KF 310
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 186/446 (41%), Gaps = 65/446 (14%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ ++ Y + + ++++RMM G + NA+L A+ + +A +Y AM+
Sbjct: 176 LAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMI 235
Query: 75 RDGVSP-----NKFTWSLVAQILCRSGKFEV-VLG-LLDSGIYSSV-MYNLVIDFYSKKG 126
DGV+P N W LC+ + V V G + G+ V YN +++ + + G
Sbjct: 236 ADGVAPDVSTYNTLIWGFG---LCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAG 292
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D +A +EM G +Y+ ++ G + E + + M EK L
Sbjct: 293 DLESARKVFDEMA-GEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGL------- 344
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+LS+ KT+AA + CD+ +GRV EA + +
Sbjct: 345 -------RLSE--KTFAA--LMPGLCDD------------------QGRVAEARKAVDDM 375
Query: 247 SERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR----FVASQC 301
+ER +T +D S + V LCK ++ G L + G + R + C
Sbjct: 376 AERRLTPKDKSVFLRLVTTLCKAG---DLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLC 432
Query: 302 GKGKWKEVEELLSAVLDKGLL-------LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL 354
GK + E+L +++KG L L++ + ++E+ CSN KA ++ K
Sbjct: 433 AGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGSTAKAETFFRQLMK- 491
Query: 355 KGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKA 413
KG D A ++ L+ G K+G E A I M +V + S ++V E A
Sbjct: 492 KGVDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADA 551
Query: 414 MKNHDEMLKMGHKPDEATYKQVISGF 439
D M++ GH P A +K V+
Sbjct: 552 KTALDSMMQQGHLPSPALFKSVMEAL 577
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 172/412 (41%), Gaps = 71/412 (17%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ V+ M+ +G P V+ N LL+A R ++ A ++ M +G N +++++ +
Sbjct: 262 AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIK 321
Query: 91 ILCRSGKFEVVLGL----------LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ E + L L ++++M L D +G A +++M
Sbjct: 322 GYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDD----QGRVAEARKAVDDMAE 377
Query: 141 GRNLTPGFSTY----------SSILDGA-----------------RRYE----------K 163
R LTP + + LDGA R+Y K
Sbjct: 378 -RRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGK 436
Query: 164 TEVSDRIVGLMVEKKLL--PKHFL---SGNDYVIQKLSDMGKTYAAEMIF----KRACDE 214
E + ++ ++EK L PK + S + VI+ L G T AE F K+ D+
Sbjct: 437 CETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGSTAKAETFFRQLMKKGVDD 496
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
K +++ +KEG + A +I +++ R + + V+ K+++P +
Sbjct: 497 KAAFN-----SLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADA 551
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L ++++G++P + + G+ + ++ ++++KG+ + ++E
Sbjct: 552 KTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEA 611
Query: 335 YCSNRQIDKAIA-LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ +++AI +++ +E G + D LL GL +GR+ EA ++ D+
Sbjct: 612 LFTRGHVEEAIGRVNLMVE--NGCM--PDLDKLLVGLCDNGRVMEAQKLADF 659
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 188/444 (42%), Gaps = 33/444 (7%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
AL L L + G+ + L V +R G P++SA ALL L+R E+R A ++ M
Sbjct: 142 ALRLALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEM 201
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMYNLVIDFYSKKGDF 128
G P+ ++ + C G + LGLL + I + YN++I YS G
Sbjct: 202 TARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQA 261
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILD----GARRYEKTEVSDRIVGLMVEKKLLPKHF 184
G AF L+EM P TY+ +++ + + D +V + +E + +
Sbjct: 262 GDAFQLLDEM-RESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNV 320
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDE-KIELQDDTCGCMLKALSKEG-RVKEAIQI 242
L K M + YA AC E K C C LS + +A+Q+
Sbjct: 321 LVDG---YAKAGRMDEAYA-------ACREMKARGLVPDC-CTFNILSAGAYKFGKAVQL 369
Query: 243 YHLISER----GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
H E G + V LC + + ++ L+ +E+G + VA
Sbjct: 370 AHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVA 429
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKL--KG 356
+ +G ++ E+ S + GL+ S + L+ C+ ++D A + +E + KG
Sbjct: 430 AYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDA---QLLLEHMICKG 486
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
++ + +D F+ G +E A++ +D M ++ V +F +S LC L + +A +
Sbjct: 487 YCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQ 546
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
EM G P+ TY +IS F
Sbjct: 547 AFVEMTGRGFVPNNITYNSLISAF 570
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/497 (19%), Positives = 201/497 (40%), Gaps = 87/497 (17%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
+ H+GL GL + +M + +P + N L+ + A L M G P
Sbjct: 220 FCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPT 279
Query: 82 KFTWSLVAQILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLN 136
T++++ +LC G L D + +++ +N+++D Y+K G A+
Sbjct: 280 VVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACR 339
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS-----GNDYV 191
EM R L P T++ + GA ++ K V L ++ L + F S D V
Sbjct: 340 EM-KARGLVPDCCTFNILSAGAYKFGKA------VQLAHGQQELHEMFGSRISADSVDMV 392
Query: 192 IQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGI 251
+ +L G+ A + A ++ + + ++ A SKEG ++A+++Y ++++ G+
Sbjct: 393 VCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGL 452
Query: 252 TVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYI------------------------ 287
+ + LC + + ++ LL ++ +GY
Sbjct: 453 VPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKC 512
Query: 288 ----------PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
P + S +++ C E + + +G + ++ +SL+ +C
Sbjct: 513 WDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCR 572
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIF----------DYMK 387
+ +A+ L K+ + DV T ++L+DG K+GR++ + F D +
Sbjct: 573 VGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVT 632
Query: 388 ELKVVSS-------SSFVIVVSR-------------------LCHLKELRKAMKNHDEML 421
++++ SS +I +++ LC+ L +A+K DE++
Sbjct: 633 YNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELV 692
Query: 422 KMGHKPDEATYKQVISG 438
MG P+ TY ++ G
Sbjct: 693 AMGCMPNSVTYNTLMDG 709
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/509 (18%), Positives = 195/509 (38%), Gaps = 87/509 (17%)
Query: 5 CEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIR 64
C G A++ +L G +V+ M G P+++ NA++ + +
Sbjct: 168 CGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVH 227
Query: 65 LASCLYGAMVRD-----------------------------------GVSPNKFTWSLVA 89
+ L G M R G P T++++
Sbjct: 228 IGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILV 287
Query: 90 QILCRSGKFEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
+LC G L D + +++ +N+++D Y+K G A+ EM R L
Sbjct: 288 NVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREM-KARGL 346
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS-----GNDYVIQKLSDMG 199
P T++ + GA ++ K V L ++ L + F S D V+ +L G
Sbjct: 347 VPDCCTFNILSAGAYKFGKA------VQLAHGQQELHEMFGSRISADSVDMVVCRLCWDG 400
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A + A ++ + + ++ A SKEG ++A+++Y ++++ G+ +
Sbjct: 401 RLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFN 460
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYI-------------------------------- 287
+ LC + + ++ LL ++ +GY
Sbjct: 461 YLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVG 520
Query: 288 --PCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + S +++ C E + + +G + ++ +SL+ +C + +A+
Sbjct: 521 VQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEAL 580
Query: 346 ALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV-RIFDYMKELKVVSSSSFVIVVSRL 404
L K+ + DV T ++L+DG K+GR++ R D ++ +++
Sbjct: 581 KLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAY 640
Query: 405 CHLKELRKAMKNHDEMLKMGHKPDEATYK 433
C +++ AM ++ML G +PD TY
Sbjct: 641 CGAQDMSSAMIFMNKMLADGCEPDIFTYN 669
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/336 (17%), Positives = 127/336 (37%), Gaps = 42/336 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +V+ NAL+ A ++ A +Y M + G+ P+ T++ + LC G+ +
Sbjct: 416 GVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDA 475
Query: 102 LGLLD----SGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDG 157
LL+ G + + +D Y + G+ A ++M + P F +S+ + G
Sbjct: 476 QLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVK-VGVQPDFIAFSAYISG 534
Query: 158 ARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIE 217
R + + + M + +P +
Sbjct: 535 LCRLDHVNEAYQAFVEMTGRGFVPNNI--------------------------------- 561
Query: 218 LQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL 277
T ++ A + G V EA+++ + + G+ ++ CKE + + +
Sbjct: 562 ----TYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKR 617
Query: 278 LRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCS 337
D+ G P + + + + CG ++ +L G D F + M C+
Sbjct: 618 FLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCN 677
Query: 338 NRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
N +++A+ + ++ + + TY+ L+DG+ D
Sbjct: 678 NHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSD 713
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 163/401 (40%), Gaps = 76/401 (18%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P+ + N LL AL + LA + A +R VSP+ FT+++V LC++G+
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLR----- 202
Query: 105 LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKT 164
K GD L P TY++I+DG
Sbjct: 203 -------------------KAGDVAKDI-------RAWGLAPSVVTYNTIIDG------- 229
Query: 165 EVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCG 224
K G+ Y + + K + I + T
Sbjct: 230 ---------------------------YCKRGRAGRMYHVDALLKEMVEAGISPNEVTFN 262
Query: 225 CMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVER 284
++ K+ A++++ + ++GI Y A V LC E + EE L+ ++ +
Sbjct: 263 VLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDL 322
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
G +P L+ + C KG + E + ++ K + + + L++ Y R++DK
Sbjct: 323 GLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGY---RRLDKM 379
Query: 345 I-ALHIKIEKLKGS---LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS--SFV 398
AL +K E + G + Y+ L+ G ++G + D M+ +K V + ++
Sbjct: 380 KDALAVK-EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMR-MKGVRADIVTYN 437
Query: 399 IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ LC E+RKA+K DEML +G +P TY +I+G+
Sbjct: 438 VLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGY 478
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 132/298 (44%), Gaps = 10/298 (3%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P N L++ + + A ++ M + G++ + T+S + LC GK E
Sbjct: 253 GISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEG 312
Query: 102 LGLLDS----GIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
+ L+D G+ ++ N V++ + KKG A ++ M +N+ P TY+ ++D
Sbjct: 313 VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSM-EQKNVKPNVVTYTILVD 371
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G RR +K + + + M K + P + + +I + G + + + +
Sbjct: 372 GYRRLDKMKDALAVKEAMSGKGVRPNARIY--NCLIAGFTRNGDWRSVSGLLDEMRMKGV 429
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T ++ AL +G V++A+++ + G+ Y +N C++ +
Sbjct: 430 RADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYE 489
Query: 277 LLRDVVERGYIPC-AMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLME 333
+R +E+G + + F+ C GK +E ELL+ +L+KGL+ + ++ E
Sbjct: 490 -IRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKE 546
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ VL+ + KG+ D M P V L+D R ++++ A + AM
Sbjct: 331 LNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMS 390
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSS-VMYNLVIDFYSKKGDFG 129
GV PN ++ + R+G + V GLLD G+ + V YN++I KG+
Sbjct: 391 GKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVR 450
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDG 157
A L+EM L P TY++I++G
Sbjct: 451 KAVKLLDEMLM-VGLEPVHLTYNTIING 477
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 10/264 (3%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ V+ M+ G +V +AL+ L + ++ L M G+ PN T + V
Sbjct: 277 AVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLN 336
Query: 91 ILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT 145
C+ G G +DS + V Y +++D Y + A + E +G+ +
Sbjct: 337 GFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALA-VKEAMSGKGVR 395
Query: 146 PGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAA 204
P Y+ ++ G + + + GL+ E ++ + + + +I L G+ A
Sbjct: 396 PNARIYNCLIAG---FTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKA 452
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
+ +E T ++ ++G +K A +I + + Y F+
Sbjct: 453 VKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKC 512
Query: 265 LCKEHQPEEVCGLLRDVVERGYIP 288
LC+ + EE LL +++E+G +P
Sbjct: 513 LCRMGKMEETNELLNEMLEKGLVP 536
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 17/372 (4%)
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKGD 127
MVR G P+ +T++ + CR+ + +V L D G V+ Y +I+ + G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP--KHFL 185
A + EM P Y++++ G E+ E ++ M E P + +
Sbjct: 61 IDEAVELFGEMDQ-----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYA 115
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHL 245
+ D+ ++ K AE + + ++ + TC ++ A KEGR+ +A+++ L
Sbjct: 116 AVVDFRCRER----KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 171
Query: 246 ISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
+ RG Y A V C E + + LL + G P A+ + + QC G
Sbjct: 172 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 231
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ LL + GL+ D + ++L+ C + + D+A +L +E + T++
Sbjct: 232 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 291
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L++GL K G+ + A + + M + ++ + LC +K ++ + EML+
Sbjct: 292 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 351
Query: 425 HKPDEATYKQVI 436
KP Y VI
Sbjct: 352 VKPSTVNYTIVI 363
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 180/442 (40%), Gaps = 28/442 (6%)
Query: 21 CYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSP 80
C + +G +GL + R M+ G+ P+ A A++D R+ + + A + M G++P
Sbjct: 87 CNAERG--EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAP 144
Query: 81 NKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
T + V C+ G+ L +L+ G +V YN ++ + +G A L
Sbjct: 145 CVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLL 204
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
N+M + P TY+ ++ G E + R++ LM L+ + + +I L
Sbjct: 205 NKM-RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY--NALINAL 261
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
G+T A +F I+ T ++ L K G+ A + + G T
Sbjct: 262 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDT 321
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y +F+ LCK +E + +++++ P + + + + + V
Sbjct: 322 YTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE 381
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
++ G D ++ M YC ++++A + +++ K ++D Y+ L+DG G+
Sbjct: 382 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 441
Query: 376 MEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLK-----------------ELRKAMKNH 417
+ AV I M + V + ++ I++ L ++ EL
Sbjct: 442 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 501
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
D M K P+ TY ++ GF
Sbjct: 502 DVMKKNEFLPNSGTYSSILEGF 523
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 181/481 (37%), Gaps = 92/481 (19%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+ V++ Y +G D L V +M++ G P V NAL+ + ++ A L M
Sbjct: 150 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 209
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGA 130
GV+P+ T++L+ + C G E LL D I YN +I+ K G
Sbjct: 210 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269
Query: 131 A---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
A FD L R + P T++S+++G + K +++ + + MV P +
Sbjct: 270 ACSLFDSLET----RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 325
Query: 188 NDYVIQKLSDM-----GKTYAAEMIFKRACDEKIE---------------LQDDTCGCM- 226
+ I+ L M G ++ EM+ K + L T G M
Sbjct: 326 S--FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 383
Query: 227 --------------LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
++A EGR+ EA + +S+ G+TV Y ++ Q +
Sbjct: 384 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 443
Query: 273 EVCGLLRDVVERGYIP------------CAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+L+ + +P M L V G WK +E
Sbjct: 444 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE---------- 493
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D F +M+ K E L S TY +L+G +DGR EEA
Sbjct: 494 -LTDVFGLFDVMK----------------KNEFLPNS---GTYSSILEGFSEDGRTEEAT 533
Query: 381 RIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ MKE + ++ + +V+ C K A M++ G P +Y+ ++SG
Sbjct: 534 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 593
Query: 440 M 440
+
Sbjct: 594 I 594
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 131/340 (38%), Gaps = 71/340 (20%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----V 100
P+ ++ L ++ L + +G MV G +P+ T++ + C G+ V
Sbjct: 354 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 413
Query: 101 VLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
++ + +G+ M YN ++D ++ G A L +M + ++ P TY +L
Sbjct: 414 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV-PNQFTYFILLR--- 469
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEM-----IFKRACDE 214
+V + + + +LP L+ G A E+ +F
Sbjct: 470 ---------HLVRMRLVEDVLP-------------LTPAGVWKAIELTDVFGLFDVMKKN 507
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+ T +L+ S++GR +EA + L+ E I++ + Y A V CK + +
Sbjct: 508 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 567
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L+ +++ G+IP M + LLS ++ +G
Sbjct: 568 WVLVCSMIQHGFIPQLMSY----------------QHLLSGLICEG-------------- 597
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDG 374
Q DKA + + S D + V++DGL K G
Sbjct: 598 -----QTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 632
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 192/503 (38%), Gaps = 79/503 (15%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI----------- 63
+++ ++ + + L+V+ + G P + CN LL L N +
Sbjct: 250 FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELK 309
Query: 64 ----------------------------RLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
R A+ + G + R G P T+S LC+
Sbjct: 310 DRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKV 369
Query: 96 GKFEVVLGLLDSGIYS-----SVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G E L L+ + Y+ S +N VI + K+G+ A L EM + P +
Sbjct: 370 GNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEM-KSSGILPDVYS 428
Query: 151 YSSI-------------LDGARRYEKTEVSDRIVGLM-VEKKLLPKHFLSGNDYVIQKLS 196
YS + LD E +++ IV + L K+ L + +
Sbjct: 429 YSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIG 488
Query: 197 DMGKTYAA---EMIFKRAC-----DEKIELQDD-----------TCGCMLKALSKEGRVK 237
Y + E + C D I+L ++ +C +++ K G
Sbjct: 489 ASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFD 548
Query: 238 EAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
+A+++++ + GI ++ C+ +E LL D E G+ + +
Sbjct: 549 QALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAII 608
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
C +G + ELL +L + +L S+L+ + +A+ L ++ K+ +
Sbjct: 609 YKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGIT 668
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKN 416
++ATY +L+ +M EA IF MKE + + S+ ++ C+ +E++KA
Sbjct: 669 FNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWAL 728
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
+EM + G P+ TY +I GF
Sbjct: 729 FEEMSREGCSPNVITYTCIIDGF 751
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/422 (18%), Positives = 170/422 (40%), Gaps = 41/422 (9%)
Query: 11 QSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY 70
S + + V+ + +G + L+V M+ G +P V + + L++A + ++ L
Sbjct: 390 NSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLM 449
Query: 71 GAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKK 125
M + P+ +++ + LC+ + + + S Y S +Y +ID + +
Sbjct: 450 EEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509
Query: 126 GDFGAAFDRLNEM-CNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP--- 181
GD +A L EM CN L P + S++ G + + + + M+ + P
Sbjct: 510 GDMDSAIKLLEEMICN--ELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTI 567
Query: 182 --KHFLSGN----------------------------DYVIQKLSDMGKTYAAEMIFKRA 211
+ L G+ + +I KL G A + R
Sbjct: 568 ACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRM 627
Query: 212 CDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQP 271
+ ++ +K+ K A+ ++ + + GIT + Y +++ H+
Sbjct: 628 LKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKM 687
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSL 331
E G+ +++ ERG + + + C + K+ L + +G + + +
Sbjct: 688 HEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCI 747
Query: 332 MEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV 391
++ +C + +ID A + K+ + DV TY VL+D K G ++A +++D MK+ V
Sbjct: 748 IDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGV 807
Query: 392 VS 393
+
Sbjct: 808 LP 809
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 154/375 (41%), Gaps = 30/375 (8%)
Query: 84 TWSLVAQIL--CRSGK---FEVVLGLLDSGIY---SSVMYNLVIDFYSKKGDFGAAFDRL 135
W+L+ I+ C K FE+ LDS + S V+++++I ++ A D
Sbjct: 211 VWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVF 270
Query: 136 NEMCNGRN--LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPK---HFLSGNDY 190
+ N ++ L P T + +L + E R+ + ++ P + + N Y
Sbjct: 271 S---NAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFY 327
Query: 191 VIQKLSDMGKTYAAEMIFK--RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
D G AA ++ K R+ ++ + T + L K G V+ A+ LI
Sbjct: 328 CSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYST---YIHGLCKVGNVEAALM---LIRN 381
Query: 249 RGITVRDSDYYAFVNVL---CKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
T + + ++F +V+ CK + E +L ++ G +P S + + CGKG
Sbjct: 382 LHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGD 441
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
+ +L+ + + +SL+ C + A+ + I D Y+
Sbjct: 442 VMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYET 501
Query: 366 LLDGLFKDGRMEEAVRIFDYM--KELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+DG G M+ A+++ + M EL V ++ S ++ L +A++ + ML+
Sbjct: 502 LIDGFCMQGDMDSAIKLLEEMICNEL-VPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRD 560
Query: 424 GHKPDEATYKQVISG 438
G PD ++ G
Sbjct: 561 GIWPDTIACNYILDG 575
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 168/407 (41%), Gaps = 73/407 (17%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRL-ASCLYGAMVRDGVSPNKFTWSLVAQILCR 94
R+ + P+V N LL+ + L S L + GV PN F+++++ + LC+
Sbjct: 111 RIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCK 170
Query: 95 SGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI 154
E L FD + M + P TY++I
Sbjct: 171 KNDVENAL---------------------------KVFDEMPTM----GMIPNLVTYTTI 199
Query: 155 LDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDE 214
L G F+S D V AE +F D+
Sbjct: 200 LGG--------------------------FVSRGDLV-----------NAEKVFSEISDK 222
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
T ++ K+GR+ +AI++ + G+ + Y ++ CKE + E
Sbjct: 223 GWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEA 282
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L+ D++++ ++P + + + C GK + L +L+K L D+ S+L+ +
Sbjct: 283 RNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHW 342
Query: 335 YCSNRQIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C ++ +A L + E +G++ + TY+ L+ G+ + G + EA R++D M E +
Sbjct: 343 LCKEGKVWEARKLFDEFE--QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRP 400
Query: 394 SS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ ++ +++ +++ ++ +EML G P+++TY +I G
Sbjct: 401 NAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 25/307 (8%)
Query: 146 PGFS----TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY---VIQKLSDM 198
PGFS TY SI+D + + D + L+ + H G+D VI+
Sbjct: 43 PGFSHTYDTYHSIID---KLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLA 99
Query: 199 GKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD--- 255
G+ A F R E+ +Q +K L+ V + YHL+ +D
Sbjct: 100 GRPRLALKTFTRI-KEEFSMQPS-----VKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYG 153
Query: 256 --SDYYAF---VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ ++F + LCK++ E + ++ G IP + + + +G E
Sbjct: 154 VLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAE 213
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGL 370
++ S + DKG L D+ + LM YC ++ AI + +E + TY V++D
Sbjct: 214 KVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAY 273
Query: 371 FKDGRMEEAVRIFDYMKELKVVSSSSFVI-VVSRLCHLKELRKAMKNHDEMLKMGHKPDE 429
K+ + EA + D M + K + SS+ V+ LC ++ A ML+ PD
Sbjct: 274 CKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDN 333
Query: 430 ATYKQVI 436
A +I
Sbjct: 334 AIMSTLI 340
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 178/435 (40%), Gaps = 23/435 (5%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGA 72
DAL + Y G D ++ +R+ R + FV + C LLD + + N Y
Sbjct: 174 DALMIT---YMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYME 230
Query: 73 MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSS-----VMYNLVIDFYSKKGD 127
++ G N + ++++ C+ G + D S V +N +I+ Y K G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290
Query: 128 FGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSG 187
F RL P TYS++++ + K + + R+ M E+ L+P
Sbjct: 291 LDVGF-RLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIP------ 343
Query: 188 NDYVIQKLSDMGKTYAAEMIFKRACDEKI---ELQDDTC--GCMLKALSKEGRVKEAIQI 242
ND + L G + ++ + +K+ LQ D ++ K G + A I
Sbjct: 344 NDVIFTTLIH-GHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ RG+ Y ++ C+ + + +++ + G + S + C
Sbjct: 403 VDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCK 462
Query: 303 KGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT 362
+G+ + E L +L G+ D + +M+ +C L +++ +V T
Sbjct: 463 EGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVT 522
Query: 363 YDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLK 422
Y+VLL+GL K G+M+ A + D M + VV + + L A K++ + +
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDD--ITYNTLLEGHHRHANASKHYKQKPE 580
Query: 423 MGHKPDEATYKQVIS 437
+G D A+YK +++
Sbjct: 581 IGIVADLASYKSLVN 595
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 146/334 (43%), Gaps = 48/334 (14%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV--- 101
P V +AL++AL ++N++ A L+ M G+ PN ++ + R+G+ +++
Sbjct: 308 PDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKES 367
Query: 102 -LGLLDSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
+L G+ V+YN +++ + K GD AA + ++ M R L P TY++++DG
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR-RGLRPDKVTYTTLIDG-- 424
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQ 219
F G G A I K IEL
Sbjct: 425 ------------------------FCRG-----------GDVDTALEIRKEMDQNGIELD 449
Query: 220 DDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLR 279
++ + KEGRV +A + + G+ D Y ++ CK+ + LL+
Sbjct: 450 RVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 280 DVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNR 339
++ G+IP + + + C G+ K + LL A+L+ G++ D ++L+E + +
Sbjct: 510 EMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHA 569
Query: 340 QIDKAIALHIKIEKLKGSL-DVATYDVLLDGLFK 372
K H K + G + D+A+Y L++ L++
Sbjct: 570 NASK----HYKQKPEIGIVADLASYKSLVNELYR 599
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 1/252 (0%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ ++ K G A+ +F + + ++ K G + ++ H + +
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
Y A +N LCKE++ + L ++ ERG IP + + + G+
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDL 363
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLD 368
++E +L KGL D ++L+ +C N + A + + + D TY L+D
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLID 423
Query: 369 GLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKP 427
G + G ++ A+ I M + + + F ++ +C + A + EML+ G KP
Sbjct: 424 GFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKP 483
Query: 428 DEATYKQVISGF 439
D+ TY ++ F
Sbjct: 484 DDVTYTMMMDAF 495
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G + + IQ + L + V ++ + K + V G ++++ G+
Sbjct: 184 GFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C +G + +++ + + L ++L+ YC +D L +EK
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRK 412
+ DV TY L++ L K+ +M+ A R+F M E ++ + F ++ ++
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDL 363
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
+++ +ML G +PD Y +++GF
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGF 390
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 59/443 (13%)
Query: 15 LSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMV 74
L+ ++ Y + + ++++RMM G + NA+L A+ + +A +Y AM+
Sbjct: 184 LAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILCRGREAMARRIYNAMI 243
Query: 75 RDGVSP-----NKFTWSLVAQILCRSGKFEV-VLGLLDS-GIYSSV-MYNLVIDFYSKKG 126
DGV+P N W LC+ + V V G + G+ V YN +++ + + G
Sbjct: 244 ADGVAPDVSTYNTLIWGFG---LCKKMETAVRVFGEMKGHGVTPDVTTYNALLNAWVRTG 300
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D +A +EM G+ + +Y+ ++ G + E + + M EK L
Sbjct: 301 DLESARKVFDEM-TGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGL------- 352
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+LS+ KT+AA + CD+ +GR EA + +
Sbjct: 353 -------RLSE--KTFAA--LMPGLCDD------------------QGRAAEARKAVDDM 383
Query: 247 SERGITVRD-SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPC-AMELSRFVASQCGKG 304
+ER +T +D S + V LCK + + R + ++ + + C G
Sbjct: 384 AERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHRKSGQFKHVLVDPRQYGVLMEGLCAGG 443
Query: 305 KWKEVEELLSAVLDKGLL-------LDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
K + E+L +++KG L L++ + ++E+ CSN KA ++ K KG
Sbjct: 444 KSEMAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEHLCSNGSTTKAETFFRQLMK-KGV 502
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS-SSSFVIVVSRLCHLKELRKAMKN 416
D A ++ L+ G K+G E A I M +V + S V++V E A
Sbjct: 503 DDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHVLLVDSFLKKNEPADAKTA 562
Query: 417 HDEMLKMGHKPDEATYKQVISGF 439
D M++ GH P A +K V+
Sbjct: 563 LDSMMQHGHLPSPALFKSVMEAL 585
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 173/412 (41%), Gaps = 71/412 (17%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
+ V+ M+ +G P V+ NALL+A R ++ A ++ M G+ N +++++ +
Sbjct: 270 AVRVFGEMKGHGVTPDVTTYNALLNAWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIK 329
Query: 91 ILCRSGKFEVVLGL----------LDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCN 140
+ E + L L ++++M L D +G A +++M
Sbjct: 330 GYVEGNRVEEAVALFAEMGEKGLRLSEKTFAALMPGLCDD----QGRAAEARKAVDDMAE 385
Query: 141 GRNLTPGFSTY----------SSILDGA-----------------RRYE----------K 163
R LTP + + LDGA R+Y K
Sbjct: 386 -RRLTPKDKSVFLRLVTTLCKAGDLDGALEVHRKSGQFKHVLVDPRQYGVLMEGLCAGGK 444
Query: 164 TEVSDRIVGLMVEKKLL--PKHFL---SGNDYVIQKLSDMGKTYAAEMIF----KRACDE 214
+E++ ++ ++EK L PK + S + VI+ L G T AE F K+ D+
Sbjct: 445 SEMAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEHLCSNGSTTKAETFFRQLMKKGVDD 504
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
K +++ +KEG + A +I +++ R + + V+ K+++P +
Sbjct: 505 KAAFN-----SLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHVLLVDSFLKKNEPADA 559
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
L +++ G++P + + G+ + ++ ++++KG+ + ++E
Sbjct: 560 KTALDSMMQHGHLPSPALFKSVMEALFNDGRIQTASRVMKSMIEKGVTENMDMAHKILEA 619
Query: 335 YCSNRQIDKAIA-LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDY 385
+ +++AI +++ +E G + D LL GL + R+ EA ++ D+
Sbjct: 620 LFTRGHVEEAIGRVNLMVE--NGCM--PDLDKLLVGLCDNDRVMEAQKLADF 667
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 35/384 (9%)
Query: 34 VYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC 93
+Y M G P VS N L+ ++ A ++G M GV+P+ T++ +
Sbjct: 238 IYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVTTYNALLNAWV 297
Query: 94 RSGKFEVVLGLLDS----GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGF 148
R+G E + D GI +SV YN++I Y + A EM + L
Sbjct: 298 RTGDLESARKVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGE-KGLRLSE 356
Query: 149 STYSSILDG-----ARRYEKTEVSDRIVGLMVEKKLLPKH---FLSGNDYVIQKLSDMGK 200
T+++++ G R E + D M E++L PK FL ++ L G
Sbjct: 357 KTFAALMPGLCDDQGRAAEARKAVDD----MAERRLTPKDKSVFLR----LVTTLCKAGD 408
Query: 201 TYAAEMIFKRACDEKIELQDD-TCGCMLKALSKEGRVKEAIQIYH-------LISERGIT 252
A + +++ K L D G +++ L G+ + AI++ L+S +
Sbjct: 409 LDGALEVHRKSGQFKHVLVDPRQYGVLMEGLCAGGKSEMAIEVLDELMEKGTLLSPKSPV 468
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ S Y + LC + R ++++G A + + +G + +E+
Sbjct: 469 LEASAYNPVIEHLCSNGSTTKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEI 527
Query: 313 LSAVLDKGLLLDSFCCSSLMEYYCS-NRQIDKAIALHIKIEKLKGSLD-VATYDVLLDGL 370
L+ + + + D L++ + N D AL ++ G L A + +++ L
Sbjct: 528 LAIMTRREVPTDPESHVLLVDSFLKKNEPADAKTALDSMMQH--GHLPSPALFKSVMEAL 585
Query: 371 FKDGRMEEAVRIFDYMKELKVVSS 394
F DGR++ A R+ M E V +
Sbjct: 586 FNDGRIQTASRVMKSMIEKGVTEN 609
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 159/382 (41%), Gaps = 50/382 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
L+L++ + K L + + + G P + ++++ L ++ ++ A L M
Sbjct: 868 TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 927
Query: 74 VRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGD 127
V++G PN +T + + LC+ G F + L L+ S Y + Y +I Y K+
Sbjct: 928 VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987
Query: 128 FGAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
A F+R+ E + L P +TY++++DG H
Sbjct: 988 LSRAEMLFERMKE----QGLVPNTNTYTTLIDG-------------------------HC 1018
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+GN K ++ + + E F C T ++ L K GR +EA ++ +
Sbjct: 1019 KAGN---FSKAYELMELMSNEGFFPNTC---------TYNSIVDGLCKRGRAEEAFKLLN 1066
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ I Y ++ CK + L + + G+ P + +A+ C +
Sbjct: 1067 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 1126
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
K+ E+L V+ GL +S++ YC +++ A+ K+ + D +Y
Sbjct: 1127 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 1186
Query: 365 VLLDGLFKDGRMEEAVRIFDYM 386
L+ GL K+ R++EA +++D M
Sbjct: 1187 ALISGLCKESRLDEARQLYDTM 1208
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/436 (19%), Positives = 180/436 (41%), Gaps = 20/436 (4%)
Query: 18 VLDC----YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
V++C ++ G + +++ MR G V N ++ + A ++ M
Sbjct: 763 VVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM 822
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDF 128
GV P+ T+ + CR+G + +++ G + + L+I + +K
Sbjct: 823 SARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLV 882
Query: 129 GAA---FDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
A F ++ +M L+P YSS++ G + + + ++ MV+ P +
Sbjct: 883 NRAVWFFHKVTKM----GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 938
Query: 186 SGNDYVIQKLSDMGKTYAAEMIF-KRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I L G T A +F K + + T M+ KE ++ A ++
Sbjct: 939 HTS--LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFE 996
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ E+G+ + Y ++ CK + L+ + G+ P + V C +G
Sbjct: 997 RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG 1056
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E +LL+ + D + L+ C +++A+ K+ K+ D+ Y
Sbjct: 1057 RAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYT 1116
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
L+ + M+++ ++FD + +L + + ++ ++ C K++ A+K +M
Sbjct: 1117 TLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDH 1176
Query: 424 GHKPDEATYKQVISGF 439
G PD +Y +ISG
Sbjct: 1177 GCAPDSISYGALISGL 1192
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/227 (18%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+E + CM+ ++ G++KEA+ + + +G+ + + V + E
Sbjct: 756 NLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYA 815
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEY 334
+ ++ RG P + + C G E + + ++++G ++D+ + ++
Sbjct: 816 GNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITA 875
Query: 335 YCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVS 393
+C +++A+ K+ K+ S ++ Y ++ GL K G +++A + + M K +
Sbjct: 876 FCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPN 935
Query: 394 SSSFVIVVSRLCHLKELRKAMKNHDEMLKM-GHKPDEATYKQVISGF 439
+ ++ LC +A + ++++ +KP+ TY +ISG+
Sbjct: 936 VYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGY 982
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 183/431 (42%), Gaps = 84/431 (19%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS-----LVAQIL 92
++ + F VSA NAL+ + + + ++ M +G+ P +T++ LV+ +
Sbjct: 160 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 219
Query: 93 CRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
S E V +++SG V YN +I Y K G A ++L +M
Sbjct: 220 VDSA--ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM------------ 265
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
R +E +D+I + + + SD G A +++
Sbjct: 266 ------ETRGHE----ADKITYMTMIQACYAD-------------SDFGSCVA---LYQE 299
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++ I++ ++ L KEG++ E ++ + +G + Y ++ K
Sbjct: 300 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 359
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK----------------------- 307
E+ LL +++ G+ P + S V C G+ +
Sbjct: 360 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 419
Query: 308 ------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
E E L + +KG DS+C ++L++ + +R++D+AIAL ++E+ +
Sbjct: 420 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 479
Query: 356 G-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKA 413
G V TY +LL G+FK+ R EEA++++D M + + +++ F + + LC ++ +A
Sbjct: 480 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 539
Query: 414 MKNHDEMLKMG 424
K DE+ MG
Sbjct: 540 CKILDELAPMG 550
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 152/369 (41%), Gaps = 14/369 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G +E R M G ++ A Y ++ LY M G+
Sbjct: 249 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 308
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
+SLV LC+ GK + V ++ G +V +Y ++ID Y+K G A L+
Sbjct: 309 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 368
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVS-DRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
M + P TYS +++G + + E + D + + F S +I L
Sbjct: 369 RMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS---LIDGL 424
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIY-HLISERGITV 253
G+ AE +F+ EK +D C ++ A +K +V EAI ++ + E G
Sbjct: 425 GKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ 483
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ + KEH+ EE L ++++G P A C GK ++L
Sbjct: 484 TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 543
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ G++LD+ C ++ C +I +A L I + + V+++ L K
Sbjct: 544 DELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV 602
Query: 374 GRMEEAVRI 382
G+ + A+++
Sbjct: 603 GKADLAMKL 611
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 43/312 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A SLV+ +G +G V+ M G P V+ L+D + + A L M
Sbjct: 311 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 370
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+ +G P+ T+S+V LC++G+ E L + + + N +
Sbjct: 371 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF-------------- 416
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
YSS++DG + + + ++R+ M EK + + +I
Sbjct: 417 -----------------YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY--NALID 457
Query: 194 KLSDMGKTYAAEMIFKR-----ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ K A +FKR CD+ + T +L + KE R +EA++++ ++ +
Sbjct: 458 AFTKHRKVDEAIALFKRMEEEEGCDQTVY----TYTILLSGMFKEHRNEEALKLWDMMID 513
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GIT + + A LC + C +L ++ G I A + + C G+ KE
Sbjct: 514 KGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA-CEDMINTLCKAGRIKE 572
Query: 309 VEELLSAVLDKG 320
+L + ++G
Sbjct: 573 ACKLADGITERG 584
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL-LDSFCCSS 330
EE+ + R + E G P + F+ + + + E + V++ G + D ++
Sbjct: 186 EELLWVWRKMKENGIEP-TLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNT 244
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+++ YC Q KA+ +E D TY ++ + D V ++ M E
Sbjct: 245 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 304
Query: 391 V-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V +F +V+ LC +L + + M++ G KP+ A Y +I G+
Sbjct: 305 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 354
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/444 (19%), Positives = 185/444 (41%), Gaps = 47/444 (10%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
++++C G + + S + D Y G + V M V +P+ A N L+ AL +
Sbjct: 110 VVEAC-GSAATAVTYSALADGYCRVGRLDEARRVVDGMPV---LPSAYAYNPLMHALCVR 165
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD-----SGIYSSVMY 115
++R A L M+ G +P+ T++++ + C+ + + L+D ++V Y
Sbjct: 166 GQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTY 225
Query: 116 NLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMV 175
N+++D ++GD A + LN + TP Y+++L G R + E + ++ M
Sbjct: 226 NVIMDGMCREGDVDYARELLNSL-PSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMF 284
Query: 176 EKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGR 235
+ P + T ++ +L +EG
Sbjct: 285 SENCPPS-------------------------------------EATLSVVISSLCQEGL 307
Query: 236 VKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSR 295
+ AI++ +S+ T Y A V+ LC++ + LL ++ G P +
Sbjct: 308 FQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNI 367
Query: 296 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
V C +W++ E+L++ + L D ++++ + C +A+ + ++ +
Sbjct: 368 LVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKG 427
Query: 356 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 415
+ TY +++GL K G+ME+++ + + M ++ ++ L +L +A++
Sbjct: 428 CCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQ 487
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
++ G P Y ++ G
Sbjct: 488 MVHKLQDTGISPQAVLYNTILLGL 511
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 167/372 (44%), Gaps = 13/372 (3%)
Query: 28 FMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSL 87
+ +E+ +MRV G P N ++D + R+ ++ A L ++ G +PN ++
Sbjct: 203 YRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNT 262
Query: 88 VAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
V + L +G++E V L+ ++ S ++VI ++G F A RL E +
Sbjct: 263 VLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAI-RLLEKMSKH 321
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTY 202
+ T TY++++ G + + ++ M P F + +++ L + +
Sbjct: 322 DCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTY--NILVKGLCNAERWE 379
Query: 203 AAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFV 262
AE + + T ++ L ++G +A++++ + E+G Y + +
Sbjct: 380 DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVI 439
Query: 263 NVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE--ELLSAVLDKG 320
L K + E+ LL ++ +G+ P E++ + ++C + K VE +++ + D G
Sbjct: 440 EGLAKTGKMEQSLELLNEMGSKGFNP---EINYHLLAECLNEEDKLVEAIQMVHKLQDTG 496
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ + ++++ C N + D+AI + + D +TY +L+ GL +G M+EA
Sbjct: 497 ISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEAR 556
Query: 381 RIFDYMKELKVV 392
+ + V+
Sbjct: 557 ELLSTLSSRDVI 568
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 46/319 (14%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
LS+V+ +GLF + + M + + NA++ L Q + A L M
Sbjct: 294 TLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNM 353
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDF 128
DG PN FT++++ + LC + ++E L+ + + +N +I F +KG
Sbjct: 354 QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLT 413
Query: 129 GAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGN 188
A + +M + P TYSS+++G + K E S
Sbjct: 414 MQAVEVFKQMPE-KGCCPNSVTYSSVIEGLAKTGKMEQS--------------------- 451
Query: 189 DYVIQKLSDMG-KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLIS 247
++ L++MG K + E+ + + + L++E ++ EAIQ+ H +
Sbjct: 452 ---LELLNEMGSKGFNPEINYH---------------LLAECLNEEDKLVEAIQMVHKLQ 493
Query: 248 ERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK 307
+ GI+ + Y + LC+ + ++ +L ++V G +P S + +G K
Sbjct: 494 DTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMK 553
Query: 308 EVEELLSAVLDKGLLLDSF 326
E ELLS + + +++D+
Sbjct: 554 EARELLSTLSSRDVIVDNL 572
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 179/412 (43%), Gaps = 12/412 (2%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
R MR G V L+ L E+ A L G M G+ PN +S + Q C+S
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 96 GKFE----VVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
G++E V + + + GI V MY +ID K G A ++ M R L P T
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVT 257
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
Y+ +++ + + + ++ M EK + P + + +I+ LSD+ + A + +
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD--VVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 211 ACDEKIELQDD--TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE 268
K ++ + T +++ L GR+++A Q+ ++ E G V Y + L +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 269 HQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCC 328
H+ + L+ ++ G P + S + C + E+LLS + D+G+ + F
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435
Query: 329 SSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
L+ C +++A L +++ LDV Y ++ G K G ++ A + + +
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494
Query: 389 LKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ + ++ IV++ ++ A +M G PD A + +I G+
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 165/344 (47%), Gaps = 11/344 (3%)
Query: 104 LLDS--GIYSSVMYNLVIDFYSKKG--DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LLD+ + +V YN V+ ++G D A R + P +Y+ ++ R
Sbjct: 67 LLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM---R 123
Query: 160 RYEKTEVSDRIVGLMVEKKLLP-KHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIEL 218
++D+ VGL+ + + + +I+ L D + A + C+ IE
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 183
Query: 219 QDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLL 278
+L+ K GR ++ +++ +SE+GI Y ++ LCK + ++ G++
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 279 RDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSN 338
+V RG P + + + C +G KE +L + +KG+ D ++L++
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303
Query: 339 RQIDKAIALHIKIEKLKGSL--DVATYDVLLDGLFKDGRMEEAVRIFDYMKELK-VVSSS 395
++D+A+ L ++ + K + +V T++ ++ GL GRM +A ++ M+E +V+
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ L + ++RKAM+ DEM +G +PD TY +I GF
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGF 407
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 177/415 (42%), Gaps = 16/415 (3%)
Query: 1 MIQSCE-GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR 59
M + CE G + S +L Y G + D +V+ M G P V L+D+L +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 60 QNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYSSVM- 114
+ + A + MVR G+ PN T++++ +C+ G + +G+L + G+ V+
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLT-PGFSTYSSILDGARRYEKTEVSDRIVGL 173
YN +I S + A L EM G+N+ P T++S++ G + + ++ +
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M E + L + +I L + K A + +E T ++K K
Sbjct: 353 MEETGCMVN--LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
+V A + + +RGI Y + +C++ E L + ++ + +
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAY 469
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
S + C G K +ELL +++D+GL D+ S ++ + + ++ A + ++
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM------KELKVVSSSSFVIVVS 402
DVA +D L+ G G + + + + M + K++S+ S +V S
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 191/441 (43%), Gaps = 66/441 (14%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRD-GVSP 80
++ GLF + ++V+ +M+ +G P+V N+LL L ++ +A +Y M+ GV+P
Sbjct: 159 FNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTP 218
Query: 81 NKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRL 135
+ FT++++ + C +G F + L G V+ YN ++D + G A++ +
Sbjct: 219 DTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVV 278
Query: 136 NEMCNGR-NLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQK 194
M +L P TY++++ G + E + + MV + L + + +I+
Sbjct: 279 KGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY--NTLIKG 336
Query: 195 LSDMGKTYAAEMIFKRACDEKIELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGIT 252
L + K + I + + DTC ++ G + +A++++ +SE I
Sbjct: 337 LCEARKFEKIKDILEGTAGDGT-FSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQ 395
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
+ Y A V LC+ G +++ E+L
Sbjct: 396 PDSATYSALVRSLCQ-----------------------------------GGHYEKAEDL 420
Query: 313 LSAVLDKGLLLDSFCCSSLM-------EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
L +L++ +LL C L+ +Y C + KA ++ + +G+ D +Y
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMR-RGTQDPPSYKT 479
Query: 366 LLDGLFKDGRMEEAVRIF------DYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDE 419
L+ G K+G E + D+ + + S +++ L H+ + A+++ ++
Sbjct: 480 LIMGHCKEGTFESGYELLVLMLRKDFXPDFETYES-----LINGLLHMDKPLLALQSLEK 534
Query: 420 MLKMGHKPDEATYKQVISGFM 440
ML+ H+P+ +T+ +++ +
Sbjct: 535 MLRSSHRPNSSTFHSILAKLL 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/369 (18%), Positives = 147/369 (39%), Gaps = 56/369 (15%)
Query: 4 SCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYR---- 59
S G + ++++ + G+ DG ++ + +G P V N L+D L R
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 60 ---------------------------------QNEIRLASCLYGAMVRDGVSPNKFTWS 86
+ EI A ++ MV G+ N T++
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 87 LVAQILCRSGKFEVVLGLLDS----GIYS--SVMYNLVIDFYSKKGDFGAA---FDRLNE 137
+ + LC + KFE + +L+ G +S + +N ++ + G+ A F+R++E
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSGNDYVI 192
+ + P +TYS+++ + E ++ ++ ++E+K+L K ++ + +
Sbjct: 392 L----KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIF 447
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ L + GKT AE F++ + + ++ KEG + ++ L+ +
Sbjct: 448 KYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFX 506
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEEL 312
Y + +N L +P L ++ + P + +A +G+ E L
Sbjct: 507 PDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASL 566
Query: 313 LSAVLDKGL 321
+ +LDK +
Sbjct: 567 IQLMLDKNI 575
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 169/410 (41%), Gaps = 53/410 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P V L+ + EI A ++ MV G+ N T++ + + LC + KFE + +
Sbjct: 290 PNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDI 349
Query: 105 LDS----GIYS--SVMYNLVIDFYSKKGDFGAA---FDRLNEMCNGRNLTPGFSTYSSIL 155
L+ G +S + +N ++ + G+ A F+R++E+ + P +TYS+++
Sbjct: 350 LEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL----KIQPDSATYSALV 405
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLP-----KHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
+ E ++ ++ ++E+K+L K ++ + + + L + GKT AE F++
Sbjct: 406 RSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQ 465
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ + ++ KEG + ++ L+ + Y + +N L +
Sbjct: 466 LMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDK 524
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
P L ++ + P + +A +G+ E L+ +LDK + + +
Sbjct: 525 PLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTG 584
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+ DKA L + L G Y V +MEE +R + + K
Sbjct: 585 CVRLLFGAGMNDKAFQL---VHLLYGK----GYSV---------KMEELIRYLCHCR--K 626
Query: 391 VVSSSSFVI----------------VVSRLCHLKELRKAMKNHDEMLKMG 424
V+ S ++ V+ +LC + +L +A + ++++MG
Sbjct: 627 VIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMG 676
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 183/431 (42%), Gaps = 84/431 (19%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS-----LVAQIL 92
++ + F VSA NAL+ + + + ++ M +G+ P +T++ LV+ +
Sbjct: 178 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237
Query: 93 CRSGKFEVVLGLLDSGIYSS--VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFST 150
S E V +++SG V YN +I Y K G A ++L +M
Sbjct: 238 VDSA--ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM------------ 283
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
R +E +D+I + + + SD G A +++
Sbjct: 284 ------ETRGHE----ADKITYMTMIQACYAD-------------SDFGSCVA---LYQE 317
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
++ I++ ++ L KEG++ E ++ + +G + Y ++ K
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWK----------------------- 307
E+ LL +++ G+ P + S V C G+ +
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 308 ------------EVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 355
E E L + +KG DS+C ++L++ + +R++D+AIAL ++E+ +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 356 G-SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSS-FVIVVSRLCHLKELRKA 413
G V TY +LL G+FK+ R EEA++++D M + + +++ F + + LC ++ +A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 414 MKNHDEMLKMG 424
K DE+ MG
Sbjct: 558 CKILDELAPMG 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 152/369 (41%), Gaps = 14/369 (3%)
Query: 22 YSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPN 81
Y G +E R M G ++ A Y ++ LY M G+
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 82 KFTWSLVAQILCRSGK----FEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGAAFDRLN 136
+SLV LC+ GK + V ++ G +V +Y ++ID Y+K G A L+
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 137 EMCNGRNLTPGFSTYSSILDGARRYEKTEVS-DRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
M + P TYS +++G + + E + D + + F S +I L
Sbjct: 387 RMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS---LIDGL 442
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTC-GCMLKALSKEGRVKEAIQIY-HLISERGITV 253
G+ AE +F+ EK +D C ++ A +K +V EAI ++ + E G
Sbjct: 443 GKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ 501
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ + KEH+ EE L ++++G P A C GK ++L
Sbjct: 502 TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKD 373
+ G++LD+ C ++ C +I +A L I + + V+++ L K
Sbjct: 562 DELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV 620
Query: 374 GRMEEAVRI 382
G+ + A+++
Sbjct: 621 GKADLAMKL 629
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 43/312 (13%)
Query: 14 ALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM 73
A SLV+ +G +G V+ M G P V+ L+D + + A L M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 74 VRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFD 133
+ +G P+ T+S+V LC++G+ E L + + + N +
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF-------------- 434
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
YSS++DG + + + ++R+ M EK + + +I
Sbjct: 435 -----------------YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY--NALID 475
Query: 194 KLSDMGKTYAAEMIFKR-----ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ K A +FKR CD+ + T +L + KE R +EA++++ ++ +
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVY----TYTILLSGMFKEHRNEEALKLWDMMID 531
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
+GIT + + A LC + C +L ++ G I A + + C G+ KE
Sbjct: 532 KGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKE 590
Query: 309 VEELLSAVLDKG 320
+L + ++G
Sbjct: 591 ACKLADGITERG 602
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 272 EEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLL-LDSFCCSS 330
EE+ + R + E G P + F+ + + + E + V++ G + D ++
Sbjct: 204 EELLWVWRKMKENGIEP-TLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNT 262
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
+++ YC Q KA+ +E D TY ++ + D V ++ M E
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 391 V-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ V +F +V+ LC +L + + M++ G KP+ A Y +I G+
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 166/400 (41%), Gaps = 44/400 (11%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQN-EIR 64
EG + A S ++ Y G + ++++ M+ YG P + NA++DA + E +
Sbjct: 106 EGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFK 165
Query: 65 LASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL----LDSGIYSSVM-YNLVI 119
++ M+R+G+ P++ T++ + + + G +E L ++ GI + YN ++
Sbjct: 166 RVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLL 225
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
D K G AF+ ++EM +N+ P TYS+++DG Y K D L E K
Sbjct: 226 DAVCKGGQLDMAFEIMSEM-PAKNILPNVVTYSTMIDG---YAKAGRLDDARNLFNEMKF 281
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
L I L + +L +K GR +EA
Sbjct: 282 LG----------------------------------ISLDRVSYNTLLSIYAKLGRFEEA 307
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ + + GI Y A + K+++ + V + ++ R P + S +
Sbjct: 308 MDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDV 367
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD 359
G ++E ++ GL D S+L++ C N ++ A++L ++ K +
Sbjct: 368 YSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 427
Query: 360 VATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVI 399
V TY+ ++D + E V EL++ S SS +
Sbjct: 428 VVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAV 467
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 115/251 (45%), Gaps = 2/251 (0%)
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I L +GK A+ +FK A E ++ A + G EAI+I++ + + G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 251 ITVRDSDYYAFVNVLCKEH-QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
+ Y A ++ K + + V + +++ G P + + +A G W+
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L ++++G+ D F ++L++ C Q+D A + ++ +V TY ++DG
Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDG 262
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
K GR+++A +F+ MK L + + S+ ++S L +AM EM G + D
Sbjct: 263 YAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKD 322
Query: 429 EATYKQVISGF 439
TY ++ G+
Sbjct: 323 VVTYNALLGGY 333
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 158/397 (39%), Gaps = 45/397 (11%)
Query: 50 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLL 105
+A++ L R ++ +A ++ A + +G + +S + RSG ++ +
Sbjct: 80 ASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMK 139
Query: 106 DSGIYSS-VMYNLVIDFYSKKG-DFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYE 162
D G+ + V YN VID K G +F + +EM NG + P T++S+L +
Sbjct: 140 DYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNG--MQPDRITFNSLLAVCSKGG 197
Query: 163 KTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDT 222
E + + MV + + F + ++ + G+ A I + I T
Sbjct: 198 LWEAARSLSCEMVNRGIDQDIFTY--NTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVT 255
Query: 223 CGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVV 282
M+ +K GR+ +A +++ + GI++ Y +++ K + EE + R++
Sbjct: 256 YSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREME 315
Query: 283 ERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
G + + + + K+ V ++ + + + + S+L++ Y
Sbjct: 316 NSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYR 375
Query: 343 KAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVS 402
+A+ + + +K DV Y L+D L K+G +E AV + D
Sbjct: 376 EAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLD------------------ 417
Query: 403 RLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
EM K G +P+ TY +I F
Sbjct: 418 ----------------EMTKEGIRPNVVTYNSIIDAF 438
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 159/408 (38%), Gaps = 69/408 (16%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L V+ MR VP A +ALL AL + A ++ M R GV+ N ++ +
Sbjct: 220 DALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAML 279
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFS 149
+ ++G D+ + S+M ++ G DR + F+
Sbjct: 280 HVCLKAG---------DAALAESLM--------TRMDAAGVPLDRFS-----------FN 311
Query: 150 TYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFK 209
T ++ L K G Y A + +
Sbjct: 312 T-------------------VIALYCRK---------------------GMQYEAMCVRE 331
Query: 210 RACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEH 269
R ++ ++ T ++ L KE RVKEA Q+ ++ G+ Y V+ C+
Sbjct: 332 RMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAG 391
Query: 270 QPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCS 329
EE L ++ G +P + + C GK KEV LL+ + ++ + D C+
Sbjct: 392 DLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCN 451
Query: 330 SLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR-IFDYMKE 388
+L+ YC + A+ + ++ + LD TY L+ G K ++EA +F+ M
Sbjct: 452 TLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGA 511
Query: 389 LKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVI 436
+ S +V LC+ + DE++K G PD+A Y+ +I
Sbjct: 512 GFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLI 559
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Query: 169 RIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLK 228
R+ M ++++P S ++ L+ T A +F + + + ML
Sbjct: 223 RVFDHMRAREVVPDAHASSA--LLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLH 280
Query: 229 ALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKE-HQPEEVCGLLRDVVE-RGY 286
K G A + + G+ + + + + C++ Q E +C +R+ +E +G
Sbjct: 281 VCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMC--VRERMENQGV 338
Query: 287 IPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIA 346
+ + + C + + KE +LL + G+ D ++L++ YC +++A+
Sbjct: 339 KADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVK 398
Query: 347 LHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLC 405
L ++E + VATY+ +L L +DG+M+E + + M E KV + + +++ C
Sbjct: 399 LRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYC 458
Query: 406 HLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ A+K M++ G + D+ TYK ++ GF
Sbjct: 459 KRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 492
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 159/358 (44%), Gaps = 11/358 (3%)
Query: 84 TWSLVAQILCRSGKFEVVLGLLDS-GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGR 142
T++++ + LC +GK L LL ++V YN VI + +G AA + + EM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERG 177
Query: 143 NLTPGFSTYSSILDGARRYEKTEVSDRIVG-LMVEKKLLPKHFLSGNDYVIQKLSDMGKT 201
+ P TY++++ G + + E + ++ ++ + ++ P + + +I D GK
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMY--NALIGGYCDRGKL 235
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A + + + T ++ AL +GR +A + + G++ Y
Sbjct: 236 DVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNIL 295
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N CKE ++ + ++ +G A+ + + + KG+ +E + L + KG+
Sbjct: 296 INGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGI 355
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
D ++L+ +C+ +++A + ++EK + D TY+ L+ G GR++EA
Sbjct: 356 RPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARG 415
Query: 382 IFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ D M + + LC + A EM+ G PD++TY +I G
Sbjct: 416 LIDEMTKRGIQPDLG-------LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 26 GLFMDGLEVYRMMRVYGFV-PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFT 84
G D +V+ M G V P+ NAL+ + ++ +A MV+ GV+ T
Sbjct: 197 GRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVAT 256
Query: 85 WSLVAQILCRSGKFEVVLGLLD----SGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMC 139
++L+ L G+ +L+ +G+ V YN++I+ Y K+G+ A + EM
Sbjct: 257 YNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316
Query: 140 NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMG 199
+ + TY+S++ R + + +DR+ + V+K + P + + +I G
Sbjct: 317 R-KGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMY--NALINSHCAGG 373
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
A I ++I D T +++ GR+ EA + +++RGI
Sbjct: 374 DMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG--- 430
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
LCK Q ++ L++++V +G P
Sbjct: 431 -----LCKNGQGDDAENLMKEMVGKGITP 454
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 181/408 (44%), Gaps = 17/408 (4%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILC---RSGKF 98
G VP + N L+ L + + + A + MV +G P+ T L+ C R G+
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 99 -EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
E+ L +G+ ++ YN ++ GDF F + +++ G P Y ++LD
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGF-KFSDIAVGDGSLPHVLAYKTMLD 123
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMGKTYAAEMIFKRACDE 214
+ KT + +VG M+ KK +P G Y +I L + A +F ++
Sbjct: 124 CLIKTGKTREASEVVGEMI-KKSVP----DGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 215 KIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEV 274
+I D +L A + ++ A +++ + +RG S Y + LC +
Sbjct: 179 EIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLA 238
Query: 275 CGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLD-KGLLLDSFCCSSLME 333
+ + RG++P + + C G+ E + L VL+ + LLD+ + L+E
Sbjct: 239 YDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIE 298
Query: 334 YYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVS 393
C ++++A+ + + + TY+ L+ G FK +++A+++F M+E K S
Sbjct: 299 GLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEE-KGFS 357
Query: 394 SSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + + LC + ++ +A + + ++ G PD TY +I G
Sbjct: 358 PNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGL 405
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 128/322 (39%), Gaps = 41/322 (12%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G +P V A +LD L + + R AS + G M++ V P+ T++ + +LC+ + +
Sbjct: 110 GSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDA 168
Query: 102 LGLLDSGIYSSVMYNL-----VIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL- 155
+ + D + ++ NL ++ + + A+ EM R P STY +L
Sbjct: 169 MKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQ-RGYGPSASTYGLLLR 227
Query: 156 ---DGARRY----------EKTEVSDR-----------IVGLMVEKKLLPKHFLSGN--- 188
+G R Y + V D + G + E K+L K L G
Sbjct: 228 CLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAL 287
Query: 189 ------DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQI 242
+ +I+ L K A + D+ T ++ K V +A+Q+
Sbjct: 288 LDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQL 347
Query: 243 YHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCG 302
+ ++ E+G + Y F++ LCK + E + VERG +P + + + G
Sbjct: 348 FRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFG 407
Query: 303 KGKWKEVEELLSAVLDKGLLLD 324
+ E L + ++G + D
Sbjct: 408 ANRMDEAHRLYREMGERGYIAD 429
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
M+E ++P + +++ L+ + A + E + TCG ++ +
Sbjct: 1 MLEDGVVPDR--DSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEM 58
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
RV E +++ + G+ V Y A + L + V G +P +
Sbjct: 59 KRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAY 118
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI-ALHIKIE 352
+ GK +E E++ ++ K + D ++L+ C + + D A+ I +E
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIKKSVP-DGMTYTALISVLCKHNRADDAMKVFDIMVE 177
Query: 353 K-LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKEL 410
K + +LDV Y LL + +++ A R+F M + S+S++ +++ LC+
Sbjct: 178 KEIVPNLDV--YTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRS 235
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISG 438
A H M GH PDE TY +I G
Sbjct: 236 YLAYDIHSSMRSRGHVPDENTYASLIYG 263
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 182/424 (42%), Gaps = 17/424 (4%)
Query: 31 GLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQ 90
G +++ M G V +ACN+LL L R+ + L MV + PN T+ ++
Sbjct: 289 GWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN 348
Query: 91 ILCRSGKFEVVLGLLD--------SGIYSS-----VMYNLVIDFYSKKGDFGAAFDRLNE 137
+C+ + + L +L+ GI S V+YN +ID K G +
Sbjct: 349 HMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMER 408
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
M + + P TY+ ++DG + + E + M ++ + P + + ++ +
Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN--VVTVNTLVGGMCR 466
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
G+ +A F A ++ T ++ A ++A+++++ + + G +
Sbjct: 467 TGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIV 526
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
YY ++ + + + +L ++ + G P + + + C K+ V E+L +
Sbjct: 527 YYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME 586
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRME 377
+ GL D+ ++L+ Y N + A + K+ K VATY +++ +G
Sbjct: 587 EAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGN 646
Query: 378 EAVRIFDYMKELKVVSSSSFV--IVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
EA+ IF MK V ++ + I+++ LC +++ A+ ++M G P+ TY +
Sbjct: 647 EAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 706
Query: 436 ISGF 439
G
Sbjct: 707 FKGL 710
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 159/377 (42%), Gaps = 28/377 (7%)
Query: 89 AQILCR-SGKFEVV------LGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
A L R SG+ E+V LD + ++ + N+ + + G A ++EM
Sbjct: 160 ASFLLRASGRSELVEESLILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFES 219
Query: 142 R---NLTPGFSTYS---SILDGARRYEKTEVSDRIVGLMV---EKKLLPKHFLSGNDYVI 192
N P +T S L R E+ D IV L++ E +L F G +I
Sbjct: 220 NDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGR--LI 277
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+L KT +F L+ C +L L++EG ++ + E I
Sbjct: 278 TRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQ 337
Query: 253 VRDSDYYAFVNVLCKEHQPEEVCGLLRDVV---ERGYIPCAME-----LSRFVASQCGKG 304
+ +N +CK + ++ +L + E G I ++E + + C G
Sbjct: 338 PNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVG 397
Query: 305 KWKEVEELLSAVL-DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATY 363
+ +E L+ + KG D+ + L++ +C +I+K L ++ K + +V T
Sbjct: 398 RQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTV 457
Query: 364 DVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLK 422
+ L+ G+ + GR+ AV F + + + ++ +++ C++ KAM+ +EMLK
Sbjct: 458 NTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Query: 423 MGHKPDEATYKQVISGF 439
G PD Y +ISGF
Sbjct: 518 SGCSPDAIVYYTLISGF 534
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/356 (17%), Positives = 127/356 (35%), Gaps = 38/356 (10%)
Query: 36 RMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRS 95
RM G P N L+D + EI L+ M ++GV+PN T + + +CR+
Sbjct: 408 RMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRT 467
Query: 96 GKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSIL 155
G+ + S+V + + KGD +N CN N ++ +L
Sbjct: 468 GR-----------VSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516
Query: 156 DGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEK 215
D IV +I S G+ A + +K
Sbjct: 517 KSGCS------PDAIVYYT----------------LISGFSQAGRMADASFVLAEL--KK 552
Query: 216 IELQDDTC--GCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEE 273
+ ++ DT ++ + + ++ + E G+ Y + K +
Sbjct: 553 LGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKF 612
Query: 274 VCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAV-LDKGLLLDSFCCSSLM 332
++R +++ G +P + + C G E E+ + + ++ + L+
Sbjct: 613 AQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILI 672
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKE 388
C N ++ A++L ++ + + TY+ + GL + +E+ D M E
Sbjct: 673 NSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 109/288 (37%), Gaps = 44/288 (15%)
Query: 8 RDSQSDALS--LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
R + DA++ +++ + + F +E++ M G P L+ + +
Sbjct: 483 RGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMAD 542
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVID 120
AS + + + G+ P+ ++ + CR+ KF V +L ++G+ ++ YN +I
Sbjct: 543 ASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIA 602
Query: 121 FYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLL 180
+ SK GD A + +M + P +TY ++++
Sbjct: 603 YASKNGDLKFAQKVMRKMIKA-GVVPTVATYGAVINA----------------------- 638
Query: 181 PKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAI 240
+ L+GN A E+ K+ ++ +L K +VK A+
Sbjct: 639 --YCLNGNG-----------NEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAV 685
Query: 241 QIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIP 288
+ + G+T + Y A L E E+V + ++E P
Sbjct: 686 SLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNP 733
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 172/402 (42%), Gaps = 49/402 (12%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
FM VY M P + L+D LY++ A ++ M G+SPN+ T++
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 87 LVAQILCRSGKFEVVLGLL----DSGIYS-SVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
++ LC+ G E L SG Y SV +N ++D + K G AF+ L +
Sbjct: 238 ILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELL-RLFEK 296
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK- 200
G YSS++DG R + + + M+++ + P L +IQ LS GK
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILY--TILIQGLSKAGKI 354
Query: 201 ------------------TYAAEMIFKRAC-----DEKIELQ---------DDTCG--CM 226
TY + K C +E LQ D C +
Sbjct: 355 EDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 227 LKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV-VERG 285
+ ++ + G V++A +I+ I + G + + + A ++ LCK + +E LL + V R
Sbjct: 415 ICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 286 ---YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQID 342
++ A +R + G + + L+ D G D + L+ +C ID
Sbjct: 475 ASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDID 534
Query: 343 KAIALHIKIEKLKG-SLDVATYDVLLDGLFKDGRMEEAVRIF 383
A+ L + + +LKG S D TY+ L++GL + GR EEA ++F
Sbjct: 535 GALKL-LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 177/433 (40%), Gaps = 47/433 (10%)
Query: 17 LVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEI-RLASCLYGAMVR 75
+++ Y+ GL +E + M+ + P V N +L + R++ LA +Y M++
Sbjct: 132 VLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLK 191
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRL 135
SPN +T+ G+L G+Y KKG A
Sbjct: 192 CNCSPNLYTF-----------------GILMDGLY-------------KKGRTSDAQKMF 221
Query: 136 NEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKL 195
++M GR ++P TY+ ++ G + E + ++ M P ++ ++
Sbjct: 222 DDM-TGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSV--AHNALLDGF 278
Query: 196 SDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRD 255
+G+ A + + + L ++ L + R +A ++Y + +R I
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDI 338
Query: 256 SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSA 315
Y + L K + E+ LLR + +G P + + + CG+G +E L
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 316 VLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
+ + D+ + L+ C N + KA + ++IEK S VAT++ L+DGL K G
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 376 MEEAVRIFDYMKELKVVS---------SSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHK 426
++EA + M+ + S + SF +V + KA KN G+
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQS----GSILKAYKNLAHFADTGNS 514
Query: 427 PDEATYKQVISGF 439
PD +Y +I+GF
Sbjct: 515 PDIVSYNVLINGF 527
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 181/454 (39%), Gaps = 53/454 (11%)
Query: 7 GRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLA 66
G S A + +LD + G ++ E+ R+ GFV + ++L+D L+R A
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 67 SCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDF 121
LY M++ + P+ ++++ Q L ++GK E L LL S GI YN VI
Sbjct: 323 FELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKA 382
Query: 122 YSKKG----------------DFGAAFDRLNEMC----NG--------------RNLTPG 147
+G F A +C NG +P
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPS 442
Query: 148 FSTYSSILDGARRYEKTEVSDRIVGLM---VEKKLLPKHFLSGN---DYVIQKLSDMGKT 201
+T+++++DG + + + + ++ M L + SGN D ++Q G
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQS----GSI 498
Query: 202 YAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAF 261
A D + ++ +EG + A+++ +++ +G++ Y
Sbjct: 499 LKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 262 VNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGL 321
+N L + + EE L + + P + C + K L L K
Sbjct: 559 INGLHRVGREEEAFKLFYAKDDFRHSPAVYR--SLMTWSCRRRKLLVAFNLWMKYLKKIS 616
Query: 322 LLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVR 381
LD + + + + + ++A+ I+++ K L + Y + L GL + GR EA+
Sbjct: 617 CLDDETANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675
Query: 382 IFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAM 414
+F ++E K+ V+ S V ++ LC ++L A+
Sbjct: 676 VFSVLREKKILVTPPSCVKLIHGLCKREQLDAAI 709
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 145/352 (41%), Gaps = 23/352 (6%)
Query: 24 HKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAM---------V 74
GL E++ + G P+V+ NAL+D L + E++ A L M +
Sbjct: 420 RNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 75 RDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFD 133
R S N+ ++ + Q ++ + D+G ++ YN++I+ + ++GD A
Sbjct: 480 RLAHSGNR-SFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALK 538
Query: 134 RLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQ 193
LN + + L+P TY+++++G R + E + ++ + + P + S + +
Sbjct: 539 LLN-VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCR 597
Query: 194 KLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITV 253
+ K A ++ + +KI DD ++ KEG + A++ + R +
Sbjct: 598 R----RKLLVAFNLWMKYL-KKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDEL 652
Query: 254 RDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELL 313
Y ++ LC+ + E + + E+ + + + C + + ++
Sbjct: 653 TLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVF 712
Query: 314 SAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
LD L C+ L+ +R+ + ++ +L ++ A YDV
Sbjct: 713 LYTLDNNFKLMPRVCNYLLSSLLQSREKMEIVS------QLTNRMERAGYDV 758
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 174 MVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
MVEK +H + + ++ L G+ AE + R + + + T G ++ + K
Sbjct: 1 MVEKGC--QHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKM 58
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G A+ + + E I Y A ++ LCK+ + L ++ ++G P +
Sbjct: 59 GDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
+ + C GKW + E+LL +++ + D ++L+ + +I +A L+ ++
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRL----CHLKE 409
D TY+ L+DG K R+++A IFD M S VI ++ L C K
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVS---KGGSPNVITINTLIGGCCRAKR 235
Query: 410 LRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ +K EML+ G PD +Y +I GF
Sbjct: 236 VDDGIKLLHEMLRRGLVPDSVSYNTLIHGF 265
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 8/278 (2%)
Query: 47 VSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL- 105
V A N L++ L R+ + A L MV +G PN+ T+ + +C+ G + L LL
Sbjct: 10 VVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLR 69
Query: 106 ---DSGIYSS-VMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
+S I + V+Y +ID K G A + EM + + + P TY+ ++DG Y
Sbjct: 70 KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEM-HDKGIFPNVLTYNCMIDGCCSY 128
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
K +++++ M+E + P + + +I GK AE +++ I
Sbjct: 129 GKWTDAEQLLRDMIESNVDPD--VVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTI 186
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T ++ K R+ +A I+ L+ +G + + C+ + ++ LL ++
Sbjct: 187 TYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEM 246
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+ RG +P ++ + + C G ++L ++ +
Sbjct: 247 LRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 151 YSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKR 210
++++++G R + ++ +V MVE P G ++ + MG T +A + ++
Sbjct: 13 FNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGT--IVNGMCKMGDTDSALNLLRK 70
Query: 211 ACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQ 270
+ I+ ++ L K+G +A ++ + ++GI Y ++ C +
Sbjct: 71 MDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGK 130
Query: 271 PEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSS 330
+ LLRD++E P + + + + +GK E EEL +L + + D+ +S
Sbjct: 131 WTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNS 190
Query: 331 LMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK 390
L++ +C + ++D A + + GS +V T + L+ G + R+++ +++ M
Sbjct: 191 LIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRG 250
Query: 391 VVSSS-SFVIVVSRLCHLKELRKAMKNHDEML 421
+V S S+ ++ C +L A EM+
Sbjct: 251 LVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMI 282
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
D + +++ + +G + E+YR M P N+L+D + + + A
Sbjct: 147 DPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKH 206
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSG-----IYSSVMYNLVIDFYS 123
++ MV G SPN T + + CR+ + + + LL + SV YN +I +
Sbjct: 207 IFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFC 266
Query: 124 KKGDFGAAFDRLNEM 138
+ GD AA D EM
Sbjct: 267 QAGDLNAAQDLFQEM 281
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 168/404 (41%), Gaps = 43/404 (10%)
Query: 42 GFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVV 101
G P + AL+ ++ A L AM R+G S + T ++V + CR G+F V
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235
Query: 102 LGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILD 156
GL + + V Y +D K+G AF L EM G+ L P T++S++D
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMV-GKGLKPNVYTHTSLID 294
Query: 157 GARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 216
G + TE + R+ +V+ +Y +
Sbjct: 295 GLCKIGWTERAFRLFLKLVKSS----------------------SYKPNV---------- 322
Query: 217 ELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCG 276
T M+ KEG++ A + + E+G+ + Y ++ C+ +
Sbjct: 323 ----HTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE 378
Query: 277 LLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYC 336
L+ + G++P + + C KGK ++ ++L +GL D + L+ +C
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHC 438
Query: 337 SNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-S 395
I A+ L ++ + D+ TY ++ + +ME++ ++FD + +V +
Sbjct: 439 KQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498
Query: 396 SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ +++ C + + A+K + M++ G PD TY +ISG
Sbjct: 499 TYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGL 542
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 147/348 (42%), Gaps = 9/348 (2%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG S ++V+ + +G F D ++ M G P V A +D L ++ ++
Sbjct: 210 EGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQ 269
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVI 119
A + MV G+ PN +T + + LC+ G F + L L+ S Y + Y ++I
Sbjct: 270 AFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
Y K+G A L M + L P +TY++++DG R + + ++ M +
Sbjct: 330 GGYCKEGKLARAEMLLGRMVE-QGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGF 388
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEA 239
LP + + +I GK A + + A + + T ++ K+G + A
Sbjct: 389 LPNIYTY--NAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYA 446
Query: 240 IQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVAS 299
+ +++ ++E Y + + C++ Q E+ L + G +P + +A
Sbjct: 447 LDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAG 506
Query: 300 QCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIAL 347
C GK ++ ++ G L D +L+ C ++++A AL
Sbjct: 507 YCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARAL 554
>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 487
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 172/384 (44%), Gaps = 18/384 (4%)
Query: 53 LLDALYRQNEIRLASCLYGA------MVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLD 106
L+ ++R+N +AS L+ MVR +S S+ + LC++ + ++
Sbjct: 5 LMLLMWRRNAESVASLLHHTACTCCRMVRR-LSTRLLNISIAS--LCKAKELNKAESVII 61
Query: 107 SGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRY 161
GI V+ YN +ID YS+ F AA+ LN M +++P TY+S++ GA R
Sbjct: 62 DGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREA-SISPDVVTYNSLIAGAARN 120
Query: 162 EKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD 221
S + M+ ++P + + ++ +GK A + ++ +
Sbjct: 121 CLLLESLNLFDEMLNMGIVPD--VWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPT 178
Query: 222 TCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDV 281
T M+ L K G A+ ++ + + G + Y +N LCK+ + +L+++
Sbjct: 179 TFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKEL 238
Query: 282 VERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQI 341
GY+P A+ + + ++K+ E+L ++DKG D F +++ ++
Sbjct: 239 ETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRL 298
Query: 342 DKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYM-KELKVVSSSSFVIV 400
++A ++ K D+A+Y+ L++ K G +E A ++ D + KE + I+
Sbjct: 299 EEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTIL 358
Query: 401 VSRLCHLKELRKAMKNHDEMLKMG 424
++ +C + A ++ M MG
Sbjct: 359 INWMCKAGNILGARRHMQHMNMMG 382
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 170/424 (40%), Gaps = 40/424 (9%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++D YS F + MR P V N+L+ R + + L+ M+ G
Sbjct: 78 LIDAYSRFVSFNAAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMG 137
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNE 137
+ P+ WS YN ++ + K G A + L +
Sbjct: 138 IVPD--VWS----------------------------YNTLMHCFFKLGKAEEANEVLRQ 167
Query: 138 MCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSD 197
+ G L+P +T++ +++G + T + + + + +P+ L + +I L
Sbjct: 168 IF-GHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQ--LITYNILINGLCK 224
Query: 198 MGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSD 257
+ AA + K T ++K + R K+ ++I + ++G T
Sbjct: 225 DRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFA 284
Query: 258 YYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVL 317
Y V VL K + EE +R +++ G + + C +G + +LL +
Sbjct: 285 YCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIE 344
Query: 318 DKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD--VATYDVLLDGLFKDGR 375
+GL D + + L+ + C I A H++ + G D + + ++DGL K+G+
Sbjct: 345 KEGLQCDEYTHTILINWMCKAGNILGA-RRHMQHMNMMG-FDSCLVALNCMVDGLCKNGQ 402
Query: 376 MEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 435
++ AV++F+ MK + SS +V LC +A K L+ G K + + V
Sbjct: 403 IDHAVKLFESMKMRDSFTYSS---LVHNLCKNGRFHRASKLLLSCLRSGMKILPSAQRVV 459
Query: 436 ISGF 439
ISG
Sbjct: 460 ISGL 463
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 16/363 (4%)
Query: 27 LFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWS 86
L ++ L ++ M G VP V + N L+ ++ + A+ + + G+SP T++
Sbjct: 122 LLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFN 181
Query: 87 LVAQILCRSGKFEVVLGLLDS-----GIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNG 141
++ LC++G L L S + + YN++I+ K AA L E+
Sbjct: 182 IMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKEL-ET 240
Query: 142 RNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY--VIQKLSDMG 199
P TY++++ R + + I+ M++K + G Y V+ L G
Sbjct: 241 SGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDK----GYTFDGFAYCTVVGVLIKTG 296
Query: 200 KTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYY 259
+ A ++ IE + ++ K+G ++ A Q+ I + G+ + +
Sbjct: 297 RLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHT 356
Query: 260 AFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDK 319
+N +CK ++ + G+ C + L+ V C G+ +L ++ +
Sbjct: 357 ILINWMCKAGNILGARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMR 416
Query: 320 GLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEA 379
DSF SSL+ C N + +A L + + + + V++ GL G +EA
Sbjct: 417 ----DSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEA 472
Query: 380 VRI 382
++
Sbjct: 473 RKL 475
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 125/291 (42%), Gaps = 24/291 (8%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
G +++++ G + L ++R ++ +GFVP + N L++ L + +R
Sbjct: 171 HGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRA 230
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSG-IYSSVMYNLVID 120
A + + G PN T++ V + RS +F E++ ++D G + Y V+
Sbjct: 231 ARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVG 290
Query: 121 FYSKKGDFGAAFDRLNEMC-NGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
K G A + + +M NG + ++Y+++++ + E + +++ + ++ L
Sbjct: 291 VLIKTGRLEEATEYMRQMIKNG--IEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEGL 348
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTC----GCMLKALSKEGR 235
+ + +I + G A +R + D+C CM+ L K G+
Sbjct: 349 QCDEY--THTILINWMCKAGNILGA----RRHMQHMNMMGFDSCLVALNCMVDGLCKNGQ 402
Query: 236 VKEAIQIYHLISERGITVRDS-DYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+ A++++ + +RDS Y + V+ LCK + LL + G
Sbjct: 403 IDHAVKLFE-----SMKMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSG 448
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 336 CSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELK----V 391
C ++++KA ++ I +L DV TY+ L+D + A + + M+E V
Sbjct: 48 CKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASISPDV 107
Query: 392 VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
V+ +S + +R C L E ++ DEML MG PD +Y ++ F
Sbjct: 108 VTYNSLIAGAARNCLLLE---SLNLFDEMLNMGIVPDVWSYNTLMHCF 152
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 190/427 (44%), Gaps = 11/427 (2%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
+L+L +H G + L++ M F+P + LL R+ +I A L M+
Sbjct: 469 ALLLGICNH-GSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLE 527
Query: 76 DGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS-----GIYSS-VMYNLVIDFYSKKGDFG 129
G+ P+ T++ + + L + G+ + L G+Y+ + YN +++ Y K G
Sbjct: 528 KGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLH 587
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
+ +M N + P ++Y+ ++ G + S + MV K + P +
Sbjct: 588 KVEMTIYDM-NQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTY--R 644
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
+I LS G A + E I + ++ A S++ R+ +A+Q+++ +
Sbjct: 645 LLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
++ Y A +N L +++ + C +LRD+VE G P + ++C G
Sbjct: 705 YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGA 764
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDG 369
L + G++ SS++ ++++ I + I + +AT+ L+ G
Sbjct: 765 FRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHG 824
Query: 370 LFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPD 428
L K+ ++ +A+ + M+ + + ++ ++++ LC ++ + A++ ++EM G +P+
Sbjct: 825 LCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPN 884
Query: 429 EATYKQV 435
TY +
Sbjct: 885 VTTYTTL 891
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 39/316 (12%)
Query: 45 PAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGL 104
P ++ N L+ ++ + + LY MVR G+ P T+ L+ L + G E+ +
Sbjct: 603 PNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKF 662
Query: 105 LDS----GIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGAR 159
LD GIY + ++++I+ +S+K A N M ++P TYS++++G
Sbjct: 663 LDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCM-KWLYMSPSSKTYSAMINGLI 721
Query: 160 RYEKTEVSDRIVGLMVEKKLLPKHF--------------LSG------------------ 187
R + S ++ MVE L PKH ++G
Sbjct: 722 RKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEV 781
Query: 188 -NDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
+ +++ LS GK ++F + T ++ L KE ++ +A+ + L+
Sbjct: 782 ADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLM 841
Query: 247 SERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKW 306
G+ + Y + LCK + L ++ +G P + + G G+
Sbjct: 842 ESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRT 901
Query: 307 KEVEELLSAVLDKGLL 322
E E+LL+ + D+GL+
Sbjct: 902 LEGEKLLNDIEDRGLV 917
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 167/408 (40%), Gaps = 17/408 (4%)
Query: 9 DSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
DS L+++ Y + +D M GF + ACNA+L+AL E +
Sbjct: 152 DSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWF 211
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKFE----VVLGLLDSGIYSSVMYNLVIDFYSK 124
+ + T ++V +C G + ++ + + + + YN ++ +Y K
Sbjct: 212 FLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVITYNTILHWYVK 271
Query: 125 KGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHF 184
KG F AA L +M + TY+ ++D + +++ + ++ M L P
Sbjct: 272 KGRFKAAMCVLEDM-EKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDE- 329
Query: 185 LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYH 244
+ +I+ D K A IF + ++ T ++ + G + EA+++ +
Sbjct: 330 -CTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLY 388
Query: 245 LISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKG 304
+ G+ + Y A +N E + ++ + G P + C G
Sbjct: 389 EMQVAGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGG 443
Query: 305 KWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYD 364
+ +E +S ++ +D ++L+ C++ +D+A+ L K+ + D+ TY
Sbjct: 444 HLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYT 503
Query: 365 VLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRK 412
+LL G + G++ AV + M E +V +V+ C LK L K
Sbjct: 504 ILLSGFCRKGKIVPAVILLQMMLEKGLVPD-----IVTYTCLLKGLIK 546
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/442 (18%), Positives = 178/442 (40%), Gaps = 17/442 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G + ++D Y G + L V M+V G P+ +A+L+ +
Sbjct: 358 QGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHE 412
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSG------KFEVVLGLLDSGIYSSVMYNLVI 119
A +Y M + G SP+ +T+ + + LC+ G +F + + S I + L++
Sbjct: 413 AFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLL 472
Query: 120 DFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
G A D +M N P TY+ +L G R K + ++ +M+EK L
Sbjct: 473 GI-CNHGSLDEALDLCEKMVT-INFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGL 530
Query: 180 LPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRA-CDEKIELQDDTCGCMLKALSKEGRVKE 238
+P + +++ L G+ AA +F+ C E + M+ K G++ +
Sbjct: 531 VPD--IVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHK 588
Query: 239 AIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVA 298
+ +++ + + Y ++ K+ L +D+V +G P + +
Sbjct: 589 VEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLIL 648
Query: 299 SQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSL 358
G + + L ++ +G+ D L+ + ++ A+ L ++ L S
Sbjct: 649 GLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSP 708
Query: 359 DVATYDVLLDGLFKDGRMEEAVRIFDYMKELKV-VSSSSFVIVVSRLCHLKELRKAMKNH 417
TY +++GL + ++ + + M E + + ++ +++ C ++ A +
Sbjct: 709 SSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLK 768
Query: 418 DEMLKMGHKPDEATYKQVISGF 439
+EM +G P E ++ G
Sbjct: 769 EEMTALGIVPAEVADSSIVRGL 790
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M G VPA A ++++ L + ++ ++ +++R G+ P T++ + LC+ K
Sbjct: 771 MTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAK 830
Query: 98 FEVVL---GLLDS-GI-YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
L L++S G+ V YN++I K A + EM + L P +TY+
Sbjct: 831 ISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEM-KSKGLRPNVTTYT 889
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKH 183
++ + +T ++++ + ++ L+P +
Sbjct: 890 TLTEAIYGTGRTLEGEKLLNDIEDRGLVPSY 920
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 181/416 (43%), Gaps = 9/416 (2%)
Query: 30 DGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVA 89
D L+V+ M G VP N ++D + ++ L M+ DG PN T++++
Sbjct: 34 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 93
Query: 90 QILCRSGKFEVVLGLLDSGIYSSVM-----YNLVIDFYSKKGDFGAAFDRLNEMCNGRNL 144
LCR+G+ + L+D S+ Y+++ D ++ G+ E + +
Sbjct: 94 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLK-KGV 152
Query: 145 TPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAA 204
G T S +L+G + K +++++ ++V L+P + + +I + A
Sbjct: 153 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY--NTLINGYCQVRDLRGA 210
Query: 205 EMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNV 264
IF++ I T ++ L K V +A + + + G+ + ++
Sbjct: 211 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 270
Query: 265 LCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLD 324
Q E+ +L D+ ++G + V + C GK E +L ++ K + +
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 330
Query: 325 SFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFD 384
+ +S+++ Y + ++A L K++ S + TY++LL GL + +++EA +
Sbjct: 331 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 390
Query: 385 YMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
++ + S+ ++S C+ + KA++ EM K G +P TY ++S
Sbjct: 391 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 70/442 (15%)
Query: 34 VYRMMRVYGFVPAVS-ACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQIL 92
V RM R G P + + N ++ L+R + A ++ MV GV PN T
Sbjct: 2 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWIT-------- 53
Query: 93 CRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
YN +ID + K GD A F RL + P TY+
Sbjct: 54 ----------------------YNTMIDGHVKGGDLEAGF-RLRDQMLHDGPKPNIVTYN 90
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+L G R + + + ++ M + P F + L+ G++ +F +
Sbjct: 91 VLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYS--ILFDGLTRTGESRTMLSLFAESL 148
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT---------------VRD-- 255
+ + L TC +L L K+G+V +A Q+ ++ G+ VRD
Sbjct: 149 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208
Query: 256 ------------------SDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFV 297
Y A +N LCK + L+ ++ + G P + +
Sbjct: 209 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268
Query: 298 ASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGS 357
+ G+ ++ +LS + KG+ D S+++ +C N +I +A+A+ + +
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328
Query: 358 LDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKN 416
+ Y+ ++D + G E+A + + MK V +S ++ +++ LC ++ +A +
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388
Query: 417 HDEMLKMGHKPDEATYKQVISG 438
+ G +PD +Y +IS
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISA 410
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 157/365 (43%), Gaps = 8/365 (2%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M + P + L D L R E R L+ ++ GV +T S++ LC+ GK
Sbjct: 112 MASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGK 171
Query: 98 F----EVVLGLLDSG-IYSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
+V+ L+ +G + ++V+YN +I+ Y + D AF +M R++ P TY+
Sbjct: 172 VAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYN 230
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
++++G + E ++ +V M + + P + + +I G+ +
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPS--VETFNTLIDAYGTAGQLEKCFTVLSDMQ 288
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
+ I+ + G ++KA K G++ EA+ I + + + Y + ++ + E
Sbjct: 289 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 348
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
+ L+ + G + + + C + E EEL+ + ++GL D ++++
Sbjct: 349 QAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 408
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVV 392
C+ DKA+ L ++ K + TY L+ L GR+ + ++ M V
Sbjct: 409 SACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVE 468
Query: 393 SSSSF 397
SSS
Sbjct: 469 PSSSI 473
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 142/330 (43%), Gaps = 10/330 (3%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
S++L+ G +V M+ G VP N L++ + ++R A C++ M
Sbjct: 160 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 219
Query: 76 DGVSPNKFTWSLVAQILCR----SGKFEVVLGLLDSGIYSSV-MYNLVIDFYSKKGDFGA 130
+ P+ T++ + LC+ + ++V+ + SG+ SV +N +ID Y G
Sbjct: 220 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 279
Query: 131 AFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDY 190
F L++M + + ++ S++ + K + I+ M+ K + P + +
Sbjct: 280 CFTVLSDM-QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS-- 336
Query: 191 VIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERG 250
+I + G T A ++ ++ + + T +LK L + ++ EA ++ + + +G
Sbjct: 337 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396
Query: 251 ITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVE 310
+ Y ++ C + ++ LL+++ + G P V++ G+ ++E
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456
Query: 311 ELLSAVLDKGLLLDSFCCSSLMEYY--CSN 338
L +L K + S +++ Y C N
Sbjct: 457 CLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 486
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 11 QSDALSL--VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASC 68
+SD +S V+ + G + + + M P N+++DA + A
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352
Query: 69 LYGAMVRDGVSPNKFTWSLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYS 123
L M GVS + T++L+ + LCRS + E++ L + G+ V+ YN +I
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412
Query: 124 KKGDFGAAFDRLNEMCNGRNLTPGFSTYSSI---LDGARR------------YEKTEVSD 168
KGD A + L EM N + P TY ++ L A R ++ E S
Sbjct: 413 NKGDTDKALELLQEM-NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 471
Query: 169 RIVGLMVE 176
I G+MV+
Sbjct: 472 SIYGIMVD 479
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 7/255 (2%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISE 248
+ VI L GK A +F D + T M+ K G ++ ++ +
Sbjct: 20 NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH 79
Query: 249 RGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKE 308
G Y ++ LC+ + +E L+ ++ P S G+ +
Sbjct: 80 DGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRT 139
Query: 309 VEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVAT---YDV 365
+ L + L KG++L ++ CS L+ C + ++ KA + +E L + V T Y+
Sbjct: 140 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV---LEMLVHTGLVPTTVIYNT 196
Query: 366 LLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMG 424
L++G + + A IF+ MK + ++ +++ LC L+ + KA EM K G
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256
Query: 425 HKPDEATYKQVISGF 439
P T+ +I +
Sbjct: 257 VDPSVETFNTLIDAY 271
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 170/412 (41%), Gaps = 8/412 (1%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
GL V+ MRV G P + + A R I MVR G + T
Sbjct: 210 GLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATC 269
Query: 86 SLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLV-----IDFYSKKGDFGAAFDRLNEMCN 140
+L+ C G V D + + NL+ I+ K+G AF+ L EM
Sbjct: 270 TLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVK 329
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
+ P T+++++DG + TE + R+ +V + + +I K
Sbjct: 330 -KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTS-MIHGYCKEDK 387
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
AEM+ R ++ + T C++ SK G ++A ++ L+ + G + Y A
Sbjct: 388 LNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNA 447
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
F++ LCK+ + E C LL+ G + + ++ C + +E S + G
Sbjct: 448 FIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAG 507
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
+ D ++L+ + R+++++ L + L TY ++ G +D + A+
Sbjct: 508 VQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLAL 567
Query: 381 RIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEAT 431
+ F+ M + S ++ ++S LC +L +A + ++ M+ G P E T
Sbjct: 568 KFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVT 619
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGL-LRDVVER 284
++ L K G +K+A ++ + ++G + A ++ LCK+ E+ L L+ V
Sbjct: 307 LINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 366
Query: 285 GYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKA 344
Y P + + C + K E LLS + ++GL+ ++ + L++ + +KA
Sbjct: 367 DYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKA 426
Query: 345 IALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSR 403
L + K S ++ TY+ +D L K GR EA ++ L + + + ++ I++S
Sbjct: 427 YELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISE 486
Query: 404 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
LC + R+A+ +M K G +PD TY +I+ F
Sbjct: 487 LCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAF 522
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 132/343 (38%), Gaps = 46/343 (13%)
Query: 38 MRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGK 97
M+ G VP L+D + A L M ++G S N FT++ LC+ G+
Sbjct: 398 MKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGR 457
Query: 98 FEVVLGLLDSGI-----YSSVMYNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYS 152
F LL G +V Y ++I ++ D A ++M + P TY+
Sbjct: 458 FLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKA-GVQPDMHTYN 516
Query: 153 SILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRAC 212
+++ R + E S+++ V L+P +TY +
Sbjct: 517 TLIAAFSRQRRMEESEKLFAEAVGLGLVPTK----------------ETYTS-------- 552
Query: 213 DEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPE 272
M+ ++ V A++ ++ +S+ G T Y A ++ LCKE + +
Sbjct: 553 -------------MICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLD 599
Query: 273 EVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLM 332
E C L +V++G PC + C + +L LDK L + + ++L+
Sbjct: 600 EACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILER-LDKKLWIRTV--NTLI 656
Query: 333 EYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGR 375
CS R++ A+ K+ ++D T ++ +
Sbjct: 657 RKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNK 699
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 26/264 (9%)
Query: 189 DYVIQKLSDMGKTYAAEMIFKRACDEKIELQDD-------TCGCMLKALSKEGRVKEAIQ 241
D +++ +++GK F+ A + IE+++ T C+ + G V A
Sbjct: 165 DCMVRVFAEIGK-------FQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAEN 217
Query: 242 IYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQC 301
++ + RG+ Y C+ + + L+D+V RG++ + +++ C
Sbjct: 218 VFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFC 277
Query: 302 GKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVA 361
KG V ++ GL + +SL+ C I +A + ++ K +V
Sbjct: 278 EKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVY 337
Query: 362 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-------SFVIVVSRLCHLKELRKAM 414
T+ L+DGL K G E+A R+F LK+V S ++ ++ C +L +A
Sbjct: 338 THTALIDGLCKKGWTEKAFRLF-----LKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAE 392
Query: 415 KNHDEMLKMGHKPDEATYKQVISG 438
M + G P+ TY +I G
Sbjct: 393 MLLSRMKEQGLVPNTKTYTCLIDG 416
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 188/444 (42%), Gaps = 17/444 (3%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
EG + + S +++ G + ++ R M ++G +P C + AL
Sbjct: 449 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 508
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLL-----DSGIYSSVMYNLVID 120
A L+ M G PN +T++ + LC SG +V +GL D ++V YN +I+
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568
Query: 121 FYSKKGDFGAAFDRLNEMCNGRN-LTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKL 179
+ AF LN M GRN L TY+ ++ G + D ++V +
Sbjct: 569 ILVENRRIKYAFVVLNLM--GRNGLFTNIVTYNEMIKG-----YCILGDPKKAMLVMNNM 621
Query: 180 LPKHF---LSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRV 236
L + L + +I+ D G T +A I D + + + ++ K ++
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681
Query: 237 KEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRF 296
+ A +++ + + G+ + Y A ++ CK+ + + LL + G P +
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741
Query: 297 VASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKG 356
+ + + EEL ++++G+ + +++++ C N A+ + K+ +
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801
Query: 357 SLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRKAMK 415
++ TY L+ L ++G++EEA +F ++ ++ ++V ++ ++ A
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 861
Query: 416 NHDEMLKMGHKPDEATYKQVISGF 439
M+K G +P TY +I G
Sbjct: 862 FLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 183/447 (40%), Gaps = 65/447 (14%)
Query: 1 MIQSCEGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQ 60
+I+SC +++ + +S LD S GL M GL Y + ++ + + A++D +R
Sbjct: 321 LIKSCHSKEAMARTMSF-LDMLSQSGLRM-GLFAYSALLIH--LSRLGMTAAVMDRYHR- 375
Query: 61 NEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVM------ 114
M+ +GV PN ++ V LC+ G ++ ++ S M
Sbjct: 376 ------------MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK-VFESEMSPDTFT 422
Query: 115 YNLVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLM 174
Y +I + +K D +A N+M P TYS++++G + + ++ M
Sbjct: 423 YTSMILGHCRKHDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481
Query: 175 VEKKLLPK-HFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKE 233
+ +LP H +G I L DMG A +F ++ E T ++ L
Sbjct: 482 ILHGILPTAHTCTGP---IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 538
Query: 234 GRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMEL 293
G +K AI ++H +S G+ Y A +N+L VE I A
Sbjct: 539 GLLKVAIGLFHRMSRDGVFPNTVTYNALINIL----------------VENRRIKYA--- 579
Query: 294 SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEK 353
FV +L+ + GL + + +++ YC KA+ + + +
Sbjct: 580 --FV--------------VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623
Query: 354 LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKELRK 412
S ++ TY+ ++ G G A+RI D M++ S+ ++ C + ++
Sbjct: 624 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 683
Query: 413 AMKNHDEMLKMGHKPDEATYKQVISGF 439
A +EM+ G P+E TY +I G+
Sbjct: 684 AFGLFNEMVDDGLCPNEVTYTALIDGY 710
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 173/452 (38%), Gaps = 66/452 (14%)
Query: 18 VLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDG 77
++ Y G L + +MR G P + L+ + +++ A L+ MV DG
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695
Query: 78 VSPNKFTWSLVAQILCRSGKFEVVLGLLD----SGIYSSV-MYNLVIDFYSKKGDFGAAF 132
+ PN+ T++ + C+ K + LL+ SG +V YN++I +K+ +F A
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA- 754
Query: 133 DRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVI 192
+ L ++ + P TY++++DG + T ++ + M+E+ LP L +I
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN--LLTYSSLI 812
Query: 193 QKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGIT 252
+ L GK AE +F + + T M++A G+V+ A + + G
Sbjct: 813 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 872
Query: 253 VRDSDYYAFVNVLCKEHQ-PEEVCGLLRDVVER---GYIPCAMEL--------------- 293
Y + L E+ ++ L DVV GY +
Sbjct: 873 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 932
Query: 294 -----SRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALH 348
+ V++ G+W E ELL +++ +GL D +SL+ R +D A+
Sbjct: 933 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM--- 989
Query: 349 IKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLK 408
G+FK + + KEL + LC L
Sbjct: 990 --------------------GVFKHMSTQGCEVHLNGYKEL-----------ICALCQLH 1018
Query: 409 ELRKAMKNHDEMLKMGHKPDEATYKQVISGFM 440
++A + ML PD+ +I G +
Sbjct: 1019 RRKEARITFENMLMRTWNPDDVVQAVLIDGLL 1050
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 173/420 (41%), Gaps = 43/420 (10%)
Query: 26 GLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTW 85
G F+ +V+ M G P + AL+ R+ ++ L AM R G S + T
Sbjct: 160 GSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC 219
Query: 86 SLVAQILCRSGKF----EVVLGLLDSGIYSSVM-YNLVIDFYSKKGDFGAAFDRLNEMCN 140
++V + LC G+F E +L++G +V+ Y ID K+ AF L EM
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV- 278
Query: 141 GRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGNDYVIQKLSDMGK 200
GR L P T+++++DG + TE + R+ KL+ N +
Sbjct: 279 GRGLKPNVYTHTTLIDGLCKIGWTERAFRLF-----LKLIKSSSYKPNVH---------- 323
Query: 201 TYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISERGITVRDSDYYA 260
TY M+ +EG++ A + + E+G+ + Y
Sbjct: 324 TYTV---------------------MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362
Query: 261 FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKG 320
+ CK + L+ + + G++P + + C KGK +E ++L +G
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422
Query: 321 LLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAV 380
L D + L+ +C I A+ L ++ + D+ Y L+ + +MEE+
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 482
Query: 381 RIFDYMKELKVVSS-SSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ FD + ++ + ++ +++ C + A++ + M++ G D TY +ISG
Sbjct: 483 KFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 542
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 183/434 (42%), Gaps = 23/434 (5%)
Query: 16 SLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLYGAMVR 75
++V+ KG F D E +R M G P V A +D L ++ ++ A + MV
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 279
Query: 76 DGVSPNKFTWSLVAQILCRSG----KFEVVLGLLDSGIYSSVM--YNLVIDFYSKKGDFG 129
G+ PN +T + + LC+ G F + L L+ S Y + Y ++I Y ++G
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 339
Query: 130 AAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLSGND 189
A L M + L P +TY++++ G + + + ++ M ++ LP + +
Sbjct: 340 RAEMLLVRMVE-QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY--N 396
Query: 190 YVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLISER 249
VI GK A + + A + ++ T ++ K+G + A+ ++ + E
Sbjct: 397 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 456
Query: 250 GITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGKWKEV 309
G Y + ++ C++ Q EE + G +P + +A C G+
Sbjct: 457 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 516
Query: 310 EELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLD---VATYDVL 366
+ ++ G DS +L+ C ++++A AL+ +G LD V
Sbjct: 517 LRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY------EGMLDKRLVPCEVTR 570
Query: 367 LDGLFKDGRMEE---AVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKM 423
+ F+ R E+ AV + D + + + V + +VV +L L ++ A ++L
Sbjct: 571 VTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVD--VVVRKLSALGDVDAASLFLKKVLDE 628
Query: 424 GHKPDEATYKQVIS 437
+ D ATY I+
Sbjct: 629 DYAVDHATYTGFIN 642
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 92/238 (38%), Gaps = 33/238 (13%)
Query: 6 EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 65
+G ++ + ++ + G F E+ M+ GF+P + NA++D ++ +I+
Sbjct: 351 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 410
Query: 66 ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 125
A + G+ +K T++++ C+ G L L
Sbjct: 411 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL--------------------- 449
Query: 126 GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 185
FDR+ E NG P Y+S++ + + E S + + LLP
Sbjct: 450 ------FDRMVE--NG--CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK-- 497
Query: 186 SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIY 243
+I +G++ A +F+R T G ++ L KE R++EA +Y
Sbjct: 498 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY 555
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 180/375 (48%), Gaps = 11/375 (2%)
Query: 13 DALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRLASCLY-G 71
+ + V+ Y G + L+ + + +G P+V + NALL++L + RLA ++
Sbjct: 121 EPIVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKN 180
Query: 72 AMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDS----GIYSSVM-YNLVIDFYSKKG 126
R V PN + +++ + LC+ + EV + +LD G+ +V+ Y V+ + +G
Sbjct: 181 CGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRG 240
Query: 127 DFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFLS 186
D A E+ + R +P ++Y+ ++DG R K + R++ +M + + P
Sbjct: 241 DMDGAMKVFREVLD-RGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTY 299
Query: 187 GNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTCGCMLKALSKEGRVKEAIQIYHLI 246
G +IQ K+ A + + + + + + C ++ L +EG V++A +++ ++
Sbjct: 300 G--VMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMV 357
Query: 247 SERGITVRDSDYYA-FVNVLCKEHQPEEVCGLLRDVVERGYIPCAMELSRFVASQCGKGK 305
S + + + + ++ LCK+ + E + D +G + + + +A C G+
Sbjct: 358 SRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVF-DEFGKGSVASLLTYNTLIAGLCEGGE 416
Query: 306 WKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLKGSLDVATYDV 365
E L +++KG+ ++F + L++ +C + I + ++ + + + +TY +
Sbjct: 417 LCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTI 476
Query: 366 LLDGLFKDGRMEEAV 380
L+DG+ G M++ +
Sbjct: 477 LIDGILLLGGMKQEI 491
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 226 MLKALSKEGRVKEAIQIYHLISERGITVRDSDYYAFVNVLCKEHQPEEVCGLLRDVVERG 285
+L G + A++++ + +RG + + Y V+ C+ + + ++ + + G
Sbjct: 232 VLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNG 291
Query: 286 YIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAI 345
P + + + C + K E L+ ++ K L++ S C +++ C ++KA
Sbjct: 292 VEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKAC 351
Query: 346 ALHIKIEK----LKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVV 401
+ + + L G++ V+T L+ L K G++ EA +FD + V S ++ ++
Sbjct: 352 EMWRMVSRKNCGLNGAVVVST---LIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLI 408
Query: 402 SRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQVISGF 439
+ LC EL +A + D+M++ G P+ TY +I GF
Sbjct: 409 AGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGF 446
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 352 EKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSS-SFVIVVSRLCHLKEL 410
E+ + +V + ++LL L K +E AV++ D M + +V + S+ V+ ++
Sbjct: 183 ERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDM 242
Query: 411 RKAMKNHDEMLKMGHKPDEATYKQVISGF 439
AMK E+L G PD +Y ++ GF
Sbjct: 243 DGAMKVFREVLDRGWSPDVTSYTVLVDGF 271
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,509,523,910
Number of Sequences: 23463169
Number of extensions: 262311070
Number of successful extensions: 706366
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3556
Number of HSP's successfully gapped in prelim test: 3470
Number of HSP's that attempted gapping in prelim test: 606821
Number of HSP's gapped (non-prelim): 44788
length of query: 440
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 294
effective length of database: 8,933,572,693
effective search space: 2626470371742
effective search space used: 2626470371742
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 78 (34.7 bits)