BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047360
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17859|AMYA_VIGMU Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1
Length = 421
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
KGGWYN LK IPD+ANAG THVWLPPPSQ +P+
Sbjct: 37 KGGWYNSLKNSIPDLANAGITHVWLPPPSQSVSPE 71
>sp|P27933|AMY3D_ORYSJ Alpha-amylase isozyme 3D OS=Oryza sativa subsp. japonica
GN=AMY1.3 PE=2 SV=2
Length = 436
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GGWYN LK ++ DIA AG THVWLPPPS APQ
Sbjct: 40 QGGWYNMLKGQVDDIAKAGVTHVWLPPPSHSVAPQ 74
>sp|P27932|AMY3A_ORYSJ Alpha-amylase isozyme 3A OS=Oryza sativa subsp. japonica
GN=AMY1.2 PE=2 SV=2
Length = 440
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GGWYN LK ++ DIA+AG THVWLPPP+ +PQ
Sbjct: 43 QGGWYNMLKDQVGDIASAGVTHVWLPPPTHSVSPQ 77
>sp|P27934|AMY3E_ORYSJ Alpha-amylase isozyme 3E OS=Oryza sativa subsp. japonica
GN=AMY1.4 PE=2 SV=1
Length = 437
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GGWYNFL +++ +IA+ G THVWLPPPS +PQ
Sbjct: 40 QGGWYNFLHEKVEEIASTGATHVWLPPPSHSVSPQ 74
>sp|P27939|AMY3C_ORYSJ Alpha-amylase isozyme 3C OS=Oryza sativa subsp. japonica
GN=AMY1.7 PE=2 SV=2
Length = 437
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GGWYNFL + DIA G THVWLPPPS APQ
Sbjct: 41 QGGWYNFLHSHVDDIAATGVTHVWLPPPSHSVAPQ 75
>sp|P27937|AMY3B_ORYSJ Alpha-amylase isozyme 3B OS=Oryza sativa subsp. japonica
GN=AMY1.6 PE=2 SV=1
Length = 438
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GGWYNFL + DIA G THVWLPPPS APQ
Sbjct: 41 QGGWYNFLHGHVDDIAATGVTHVWLPPPSHSVAPQ 75
>sp|P08117|AMY3_WHEAT Alpha-amylase AMY3 OS=Triticum aestivum GN=AMY1.1 PE=2 SV=1
Length = 413
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GGWY F++ ++ +IA+ G THVWLPPPSQ +P+
Sbjct: 40 QGGWYKFMQGKVEEIASTGATHVWLPPPSQSVSPE 74
>sp|P04750|AMY6_HORVU Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.6 PE=2
SV=2
Length = 429
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
GGWYNFL ++ DIA AG THVWLPP SQ A Q
Sbjct: 40 GGWYNFLMGKVDDIAAAGVTHVWLPPASQSVAEQ 73
>sp|P04063|AMY2_HORVU Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.2 PE=1
SV=3
Length = 427
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
GGWYNFL ++ DIA AG THVWLPP SQ A Q
Sbjct: 40 GGWYNFLMGKVDDIAAAGITHVWLPPASQSVAEQ 73
>sp|P04747|AMY3_HORVU Alpha-amylase type B isozyme (Fragment) OS=Hordeum vulgare
GN=AMY1.3 PE=2 SV=1
Length = 368
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
GGWYNFL ++ DIA AG THVWLPP SQ A Q
Sbjct: 40 GGWYNFLMGKVDDIAAAGITHVWLPPASQSVAEQ 73
>sp|P17654|AMY1_ORYSJ Alpha-amylase OS=Oryza sativa subsp. japonica GN=AMY1.1 PE=2 SV=2
Length = 434
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 24/34 (70%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
GGWYNFL ++ DIA AG THVWLPPPS Q
Sbjct: 47 GGWYNFLMGKVDDIAAAGITHVWLPPPSHSVGEQ 80
>sp|Q8VZ56|AMY1_ARATH Alpha-amylase 1 OS=Arabidopsis thaliana GN=AMY1 PE=2 SV=1
Length = 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
+GG+YN L I DIANAG TH+WLPPPSQ AP+
Sbjct: 40 EGGFYNSLHNSIDDIANAGITHLWLPPPSQSVAPE 74
>sp|Q0D9J1|AMY2A_ORYSJ Alpha-amylase isozyme 2A OS=Oryza sativa subsp. japonica GN=AMY2A
PE=2 SV=1
Length = 445
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
GGWYN L ++ DI AG THVWLPPPS + Q
Sbjct: 38 GGWYNLLMGKVDDIVAAGVTHVWLPPPSHSVSTQ 71
>sp|A2YGY2|AMY2A_ORYSI Alpha-amylase isozyme 2A OS=Oryza sativa subsp. indica GN=AMYC2
PE=2 SV=1
Length = 446
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
GGWYN L ++ DI AG THVWLPPPS + Q
Sbjct: 38 GGWYNLLMGKVDDIVAAGVTHVWLPPPSHSVSTQ 71
>sp|P00693|AMY1_HORVU Alpha-amylase type A isozyme OS=Hordeum vulgare GN=AMY1.1 PE=1
SV=1
Length = 438
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQE 36
GGWYN + ++ DIA AG THVWLPPPS H+ E
Sbjct: 41 GGWYNMMMGKVDDIAAAGVTHVWLPPPS-HSVSNE 74
>sp|Q8LFG1|AMY2_ARATH Probable alpha-amylase 2 OS=Arabidopsis thaliana GN=AMY2 PE=2
SV=1
Length = 413
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 1 KGGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
K W+ L ++PDIA +G T WLPPPSQ AP+
Sbjct: 38 KYDWWRNLDGKVPDIAKSGFTSAWLPPPSQSLAPE 72
>sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=AMY3 PE=1
SV=1
Length = 887
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 2 GGWYNFLKKRIPDIANAGTTHVWLPPPSQHAAPQ 35
G WY L+++ ++A+ G T +WLPPP++ +P+
Sbjct: 510 GRWYLELQEKADELASLGFTVLWLPPPTESVSPE 543
>sp|O22187|Y2232_ARATH Probable receptor-like protein kinase At2g23200 OS=Arabidopsis
thaliana GN=At2g23200 PE=3 SV=1
Length = 834
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 9 KKRIPDIANAGTTHVWLPPPSQHAAPQEKKEKAKNRNAPISNFELGALRIPKSNLLS 65
KK P++ GT VW P P + + ++ N+P+ N LG L IP +++LS
Sbjct: 432 KKTKPEVE--GT--VWSPLPLHRGGSSDNRPISQYHNSPLRNLHLG-LTIPFTDILS 483
>sp|P22963|AMT4_PSESA Glucan 1,4-alpha-maltotetraohydrolase OS=Pseudomonas
saccharophila GN=mta PE=3 SV=1
Length = 551
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 4 WYNFLKKRIPDIANAGTTHVWLPPP 28
WYN L+++ IA G + +W+P P
Sbjct: 56 WYNILRQQASTIAADGFSAIWMPVP 80
>sp|P13507|AMT4_PSEST Glucan 1,4-alpha-maltotetraohydrolase OS=Pseudomonas stutzeri
GN=amyP PE=1 SV=2
Length = 548
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 4 WYNFLKKRIPDIANAGTTHVWLPPP 28
WYN L+++ IA G + +W+P P
Sbjct: 56 WYNILRQQAATIAADGFSAIWMPVP 80
>sp|B2BND9|VP1_AQRVG Outer capsid protein VP1 OS=Aquareovirus G (isolate American grass
carp/USA/PB01-155/-) GN=S1 PE=3 SV=1
Length = 1298
Score = 28.9 bits (63), Expect = 8.5, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 7 FLKKRIPDIANAGTTHVWLPPPSQHAAP 34
L +P IANAGTT +WL + A P
Sbjct: 914 LLANLLPSIANAGTTRLWLQVNAPLAGP 941
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,397,644
Number of Sequences: 539616
Number of extensions: 1500191
Number of successful extensions: 3639
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3614
Number of HSP's gapped (non-prelim): 39
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)