BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047362
(109 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356529850|ref|XP_003533500.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Glycine max]
Length = 172
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 78/105 (74%)
Query: 5 LSRKFPAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTY 64
LS +F ++K N NP SSS + + I+ ++ K S S SWSVYLI+STN PIKTY
Sbjct: 4 LSTQFRSIKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESESWSVYLILSTNHPIKTY 63
Query: 65 VGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
VG T NFPRRLKQHNGEL+GGAKAS+AGRPWI ACII GF D+S+
Sbjct: 64 VGITNNFPRRLKQHNGELKGGAKASRAGRPWICACIICGFTDRSE 108
>gi|297795115|ref|XP_002865442.1| hypothetical protein ARALYDRAFT_494683 [Arabidopsis lyrata subsp.
lyrata]
gi|297311277|gb|EFH41701.1| hypothetical protein ARALYDRAFT_494683 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 1 MFNNLSRKFPAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSN---SRSWSVYLIIST 57
M LSR FP+VK R+ K +S + PI S S + NS S+SWSVYLI+ST
Sbjct: 1 MTRLLSRTFPSVKLRDFKTLK---NSQTQVPISSSSSQQSQENSKIPKSKSWSVYLILST 57
Query: 58 NPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
PIKTYVG TT+F RRLKQHNGE+RGGAKAS AGRPW+ ACII GF
Sbjct: 58 TEPIKTYVGITTDFARRLKQHNGEIRGGAKASSAGRPWLCACIITGF 104
>gi|15239808|ref|NP_199135.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis thaliana]
gi|10177383|dbj|BAB10584.1| unnamed protein product [Arabidopsis thaliana]
gi|332007541|gb|AED94924.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis thaliana]
Length = 170
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 13/113 (11%)
Query: 1 MFNNLSRKFPAVKNRNPNPS----KLSSSSSSPTPIRSQSQSKRTPNSNSR-----SWSV 51
M LSR FP+VK R+ NP K +S + PI S S +P NS+ SWSV
Sbjct: 1 MTRLLSRTFPSVKLRDSNPKAPEFKNLKNSQTQVPIPSSS----SPQENSKIPKSKSWSV 56
Query: 52 YLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YLI+ST PIKTYVG TT+F RRLKQHNGE+RGGAKAS AGRPW+ ACII GF
Sbjct: 57 YLILSTTEPIKTYVGITTDFSRRLKQHNGEIRGGAKASSAGRPWLCACIITGF 109
>gi|225449967|ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
vinifera]
gi|296085104|emb|CBI28599.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 10/105 (9%)
Query: 5 LSRKFPAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTY 64
+S+ F ++K NPNP+ P S+S + + +S SW VYLI+STN PIKTY
Sbjct: 4 ISKIFRSIKCSNPNPN----------PDPSKSSPSSSRSRSSFSWLVYLILSTNTPIKTY 53
Query: 65 VGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
VG TTNF RRLKQHNGEL+GGAKAS+ GRPW+ ACIIQGF D+S+
Sbjct: 54 VGVTTNFSRRLKQHNGELKGGAKASRTGRPWVCACIIQGFKDKSE 98
>gi|224055063|ref|XP_002298410.1| predicted protein [Populus trichocarpa]
gi|222845668|gb|EEE83215.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 55/59 (93%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
VYLI+STN PIKTYVG TTNF RRLKQHNGEL+GGAKAS+AGRPWI ACII+GF+D+S+
Sbjct: 55 VYLILSTNRPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSE 113
>gi|224054920|ref|XP_002298387.1| predicted protein [Populus trichocarpa]
gi|222845645|gb|EEE83192.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 55/59 (93%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
VYLI+STN PIKTYVG TTNF RRLKQHNGEL+GGAKAS+AGRPWI ACII+GF+D+S+
Sbjct: 56 VYLILSTNHPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSE 114
>gi|147844250|emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
Length = 1697
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/61 (78%), Positives = 54/61 (88%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI+STN PIKTYVG TTNF RRLKQHNGEL+GGAKAS+ GRPW+ ACIIQGF D+S
Sbjct: 1176 WLVYLILSTNTPIKTYVGVTTNFSRRLKQHNGELKGGAKASRTGRPWVCACIIQGFXDKS 1235
Query: 109 D 109
+
Sbjct: 1236 E 1236
>gi|224054938|ref|XP_002298390.1| predicted protein [Populus trichocarpa]
gi|222845648|gb|EEE83195.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 55/59 (93%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
VYLI+STN PIKTYVG TTNF RRLKQHNG+L+GGAKAS+AGRPWI ACII+GF+D+S+
Sbjct: 56 VYLILSTNHPIKTYVGVTTNFSRRLKQHNGKLKGGAKASRAGRPWICACIIRGFNDRSE 114
>gi|449467603|ref|XP_004151512.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Cucumis sativus]
Length = 170
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 39 KRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISA 98
K P + W VYLIIS+N PIKTYVG T +F RRLKQHNGE++GGAKA++AGRPWI A
Sbjct: 36 KSEPKPKLKQWCVYLIISSNSPIKTYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICA 95
Query: 99 CIIQGFHDQS 108
C I GF DQS
Sbjct: 96 CTIHGFKDQS 105
>gi|449527458|ref|XP_004170728.1| PREDICTED: structure-specific endonuclease subunit slx1-like,
partial [Cucumis sativus]
Length = 106
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 39 KRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISA 98
K P + W VYLIIS+N PIKTYVG T +F RRLKQHNGE++GGAKA++AGRPWI A
Sbjct: 36 KSEPKPKLKQWCVYLIISSNSPIKTYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICA 95
Query: 99 CIIQGFHDQS 108
C I GF DQS
Sbjct: 96 CTIHGFKDQS 105
>gi|357157710|ref|XP_003577888.1| PREDICTED: uncharacterized protein LOC100842997 [Brachypodium
distachyon]
Length = 180
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ P +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+++GF ++S
Sbjct: 67 WCVYLIASSRIP-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLVEGFTNRS 125
Query: 109 D 109
+
Sbjct: 126 E 126
>gi|218185239|gb|EEC67666.1| hypothetical protein OsI_35089 [Oryza sativa Indica Group]
Length = 204
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ P +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+I+GF ++S
Sbjct: 91 WCVYLIASSRIP-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRS 149
Query: 109 D 109
+
Sbjct: 150 E 150
>gi|116778984|gb|ABK21086.1| unknown [Picea sitchensis]
Length = 160
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 47 RSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHD 106
R W VYLIIS + KTYVG TT+F RRLKQHNGEL GGAKAS+AGRPW C++ GF
Sbjct: 30 RGWYVYLIISADMR-KTYVGVTTDFERRLKQHNGELNGGAKASRAGRPWQCVCLVHGFEG 88
Query: 107 QSD 109
+S+
Sbjct: 89 RSE 91
>gi|326498227|dbj|BAJ98541.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 185
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ P +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+++GF ++S
Sbjct: 72 WCVYLIASSRVP-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLVEGFTNRS 130
Query: 109 D 109
+
Sbjct: 131 E 131
>gi|346703394|emb|CBX25491.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ P +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+I+GF ++S
Sbjct: 88 WCVYLIASSWIP-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRS 146
Query: 109 D 109
+
Sbjct: 147 E 147
>gi|297727971|ref|NP_001176349.1| Os11g0146550 [Oryza sativa Japonica Group]
gi|255679784|dbj|BAH95077.1| Os11g0146550 [Oryza sativa Japonica Group]
Length = 125
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ P +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+I+GF ++S
Sbjct: 52 WCVYLIASSRIP-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRS 110
Query: 109 D 109
+
Sbjct: 111 E 111
>gi|242082568|ref|XP_002441709.1| hypothetical protein SORBIDRAFT_08g001060 [Sorghum bicolor]
gi|241942402|gb|EES15547.1| hypothetical protein SORBIDRAFT_08g001060 [Sorghum bicolor]
Length = 163
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ P +TYVG TT+FPRRL+QHNGEL+GGAKA+ AGRPW AC+++GF ++S
Sbjct: 50 WCVYLIASSRIP-RTYVGVTTDFPRRLRQHNGELKGGAKAASAGRPWNLACLVEGFANRS 108
Query: 109 D 109
+
Sbjct: 109 E 109
>gi|218186423|gb|EEC68850.1| hypothetical protein OsI_37440 [Oryza sativa Indica Group]
Length = 164
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+I+GF ++S
Sbjct: 51 WCVYLIASSRIS-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRS 109
Query: 109 D 109
+
Sbjct: 110 E 110
>gi|222616624|gb|EEE52756.1| hypothetical protein OsJ_35194 [Oryza sativa Japonica Group]
Length = 164
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+I+GF ++S
Sbjct: 51 WCVYLIASSRIS-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRS 109
Query: 109 D 109
+
Sbjct: 110 E 110
>gi|413915885|gb|AFW55817.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
Length = 162
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+++GF ++S
Sbjct: 49 WCVYLIASSRIR-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLVEGFANRS 107
Query: 109 D 109
+
Sbjct: 108 E 108
>gi|297612659|ref|NP_001066136.2| Os12g0143300 [Oryza sativa Japonica Group]
gi|255670044|dbj|BAF29155.2| Os12g0143300 [Oryza sativa Japonica Group]
Length = 112
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+I+GF ++S
Sbjct: 51 WCVYLIASSRIS-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRS 109
Query: 109 D 109
+
Sbjct: 110 E 110
>gi|226505460|ref|NP_001150522.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
gi|195639860|gb|ACG39398.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
Length = 162
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VYLI S+ +TYVG TT+FPRRL+QHNGEL+GGAKAS AGRPW AC+++GF ++S
Sbjct: 49 WCVYLIASSRIR-RTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLVEGFANRS 107
Query: 109 D 109
+
Sbjct: 108 E 108
>gi|397625532|gb|EJK67830.1| hypothetical protein THAOC_11076 [Thalassiosira oceanica]
Length = 545
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 37 QSKRTPNSNSRSWSVYLIISTNP--PIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ-AG 92
++K + + S+ + YL+ S +P P+KTY+G TTN RRL+QHNG+L+ GGA+ ++ AG
Sbjct: 174 KNKVSSDQESKHYHCYLLRSLDPGHPLKTYIGFTTNPERRLRQHNGDLKNGGARRTKRAG 233
Query: 93 RPWISACIIQGFHDQ 107
RPW C++ GF D+
Sbjct: 234 RPWTFVCVVHGFQDK 248
>gi|168051114|ref|XP_001778001.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670649|gb|EDQ57214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 36 SQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW 95
S++ + + W VYLI+S N +TY+G T N RRL+QHNGEL GGAK+++ GRPW
Sbjct: 190 SENDESAEAEGNEWCVYLILS-NDKRRTYMGATANITRRLRQHNGELAGGAKSTRGGRPW 248
Query: 96 ISACIIQGFHDQSD 109
C ++G +S+
Sbjct: 249 SLVCTMRGLSSRSE 262
>gi|223995939|ref|XP_002287643.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976759|gb|EED95086.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 774
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 6/91 (6%)
Query: 23 SSSSSSPTPIRSQSQSKRTPN--SNSRSWSVYLIISTNP--PIKTYVGTTTNFPRRLKQH 78
S S++ PT + + +K T N N++ + YL+ S +P P+KTY+G TT+ RR++QH
Sbjct: 350 SVSTALPTSLSNNGNAKTTSNNNDNTKHYHTYLLRSLSPDHPLKTYIGFTTHPSRRIRQH 409
Query: 79 NGELR-GGAKASQ-AGRPWISACIIQGFHDQ 107
NG L+ GGA+ ++ +GRPW C+I GF D+
Sbjct: 410 NGILKNGGARRTKRSGRPWTFTCVIAGFQDK 440
>gi|255574060|ref|XP_002527946.1| nuclease, putative [Ricinus communis]
gi|223532650|gb|EEF34435.1| nuclease, putative [Ricinus communis]
Length = 150
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 75 LKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
LKQHNGEL+GGAKAS AGRPWI ACI+ GF+DQS+
Sbjct: 52 LKQHNGELKGGAKASCAGRPWICACIVHGFNDQSE 86
>gi|397571868|gb|EJK48000.1| hypothetical protein THAOC_33238 [Thalassiosira oceanica]
Length = 733
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 44 SNSRSWSVYLIISTNP--PIKTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACI 100
+ R YL+ S NP P+KTY+G TT+ RR++QHNGE+ GGA + ++AGRPW +
Sbjct: 64 EDERRHHCYLMRSINPSYPLKTYIGYTTDPLRRVRQHNGEIVGGARRTAKAGRPWECVAV 123
Query: 101 IQGFHDQ 107
+ GF D+
Sbjct: 124 VSGFADK 130
>gi|167377973|ref|XP_001734615.1| structure-specific endonuclease SLX1 [Entamoeba dispar SAW760]
gi|165903820|gb|EDR29249.1| structure-specific endonuclease SLX1, putative [Entamoeba dispar
SAW760]
Length = 308
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 NSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACI 100
N +S + VYL+ S NP K TY+G TT PRR+KQHNG + GGA ++A RPW +
Sbjct: 4 NISSMKFCVYLLTSINPGFKYHTYIGKTTCPPRRIKQHNGIISGGAFKTEAKRPWEMVIV 63
Query: 101 IQGF 104
+ F
Sbjct: 64 VHSF 67
>gi|407035054|gb|EKE37506.1| GIY-YIG catalytic domain containing protein [Entamoeba nuttalli
P19]
Length = 308
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 NSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACI 100
N +S + VYL+ S NP K TY+G TT PRR+KQHNG + GGA ++A RPW +
Sbjct: 4 NISSMKFCVYLLTSINPGFKYHTYIGKTTCPPRRIKQHNGIISGGAFKTEAKRPWEMVIV 63
Query: 101 IQGF 104
+ F
Sbjct: 64 VHSF 67
>gi|67474328|ref|XP_652913.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469817|gb|EAL47526.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449704769|gb|EMD44948.1| structure-specific endonuclease SLX1, putative [Entamoeba
histolytica KU27]
Length = 308
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 NSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACI 100
N +S + VYL+ S NP K TY+G TT PRR+KQHNG + GGA ++A RPW +
Sbjct: 4 NISSMKFCVYLLTSINPGFKYHTYIGKTTCPPRRIKQHNGIISGGAFKTEAKRPWEMVIV 63
Query: 101 IQGF 104
+ F
Sbjct: 64 VHSF 67
>gi|440290317|gb|ELP83743.1| hypothetical protein EIN_469570 [Entamoeba invadens IP1]
Length = 319
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 43 NSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACI 100
N+++ + VYL+ S NP K TY+G TT+ PRR+KQHNG + GGA +++ RPW +
Sbjct: 4 NTSTLKFCVYLLTSINPGFKYHTYIGKTTSPPRRIKQHNGIIAGGAFKTESKRPWEMVVV 63
Query: 101 IQGFHDQS 108
+ F Q+
Sbjct: 64 VHSFPTQA 71
>gi|170098458|ref|XP_001880448.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644886|gb|EDR09135.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 611
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S P+ TY+G+T + PRR++QHNGEL GA+ ++ RPW+ I+ GF
Sbjct: 13 YACYLLKSIQSPLSKATYIGSTPSPPRRIRQHNGELTQGARKTRHKRPWVMQMIVHGF 70
>gi|209882697|ref|XP_002142784.1| GIY-YIG catalytic domain-containing protein [Cryptosporidium muris
RN66]
gi|209558390|gb|EEA08435.1| GIY-YIG catalytic domain-containing protein [Cryptosporidium muris
RN66]
Length = 386
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 52 YLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YL++S + +Y+G T N RRL+QHNGE++ GAK +++G PW A I GF
Sbjct: 17 YLLLSESKKKASYIGYTVNPVRRLRQHNGEIKKGAKKTKSGIPWYMAICIDGF 69
>gi|213403910|ref|XP_002172727.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces japonicus yFS275]
gi|259511448|sp|B6JY16.1|SLX1_SCHJY RecName: Full=Structure-specific endonuclease subunit slx1
gi|212000774|gb|EEB06434.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces japonicus yFS275]
Length = 273
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 49 WSVYLIISTNPPIK-TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL++S + Y+G+T + RRL+QHNGE++GGA ++ RPW AC + GF
Sbjct: 3 YCCYLLVSEKAASRSVYIGSTPDPARRLRQHNGEIKGGAYKTKRSRPWKVACFVHGF 59
>gi|19114332|ref|NP_593420.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces pombe 972h-]
gi|74625411|sp|Q9P7M3.1|SLX1_SCHPO RecName: Full=Structure-specific endonuclease subunit slx1
gi|7106110|emb|CAB76036.1| structure-specific endonuclease catalytic subunit
[Schizosaccharomyces pombe]
Length = 271
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 49 WSVYLIIS--TNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S T Y+G+T + PRRL+QHNGE+ GGA ++ GRPW +C++ GF
Sbjct: 7 YCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHNGEIVGGASKTKHGRPWSISCLVYGF 64
>gi|9294275|dbj|BAB02177.1| unnamed protein product [Arabidopsis thaliana]
Length = 34
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 69 TNFPRRLKQHNGELRGGAKASQAGRPWISACII 101
++F RRLKQH GE+RGGAKAS GRPW+ ACI+
Sbjct: 2 SDFARRLKQHYGEIRGGAKASSTGRPWLCACIL 34
>gi|343470006|emb|CCD17159.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 520
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNP--PIKTYVGTTTNFPRRLKQHNGELRGGAKAS-QAGRPWISACII 101
++R SVYL+ S +P P Y+G + N RRL+QHNGEL GA+ + + GRPWI +
Sbjct: 2 DTRFHSVYLLTSLDPQLPGAYYIGYSLNPVRRLRQHNGELVNGARRTRKCGRPWILLLCV 61
Query: 102 QGFHD 106
GF +
Sbjct: 62 SGFGE 66
>gi|403170047|ref|XP_003329451.2| hypothetical protein PGTG_11201 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168542|gb|EFP85032.2| hypothetical protein PGTG_11201 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 492
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T N PRR++QHNGEL+GGA ++ RPW I GF
Sbjct: 47 RTYVGSTPNPPRRIRQHNGELKGGAVRTKYYRPWEMELICYGF 89
>gi|149924936|ref|ZP_01913266.1| Excinuclease ABC, C subunit-like protein [Plesiocystis pacifica
SIR-1]
gi|149814204|gb|EDM73817.1| Excinuclease ABC, C subunit-like protein [Plesiocystis pacifica
SIR-1]
Length = 95
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISA 98
W +YL+ S + ++YVG T + RRL QHNGEL GGAK+++ GRPW A
Sbjct: 20 WWLYLLRSASG--RSYVGITVDLERRLAQHNGELPGGAKSTRGGRPWAFA 67
>gi|409047655|gb|EKM57134.1| hypothetical protein PHACADRAFT_172822 [Phanerochaete carnosa
HHB-10118-sp]
Length = 517
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 49 WSVYLI--ISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ + T+ + TY+G+T + PRR++QHNGE+ GA+ ++ RPW+ I+ GF
Sbjct: 19 YACYLLRSVKTSKSMATYIGSTPSPPRRIRQHNGEITQGARKTERNRPWVMQMIVCGF 76
>gi|78485447|ref|YP_391372.1| excinuclease ABC subunit C [Thiomicrospira crunogena XCL-2]
gi|78363733|gb|ABB41698.1| hypothetical protein with a GIY-YIG catalytic domain
[Thiomicrospira crunogena XCL-2]
Length = 87
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 46 SRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+SW VYL+ + + Y G T + RRL+QHNGE++GGAK +QA RP
Sbjct: 3 EQSWVVYLLKCGDNTL--YCGVTNDLDRRLRQHNGEIKGGAKYTQARRP 49
>gi|71006676|ref|XP_758004.1| hypothetical protein UM01857.1 [Ustilago maydis 521]
gi|74703277|sp|Q4PDF6.1|SLX1_USTMA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|46097505|gb|EAK82738.1| hypothetical protein UM01857.1 [Ustilago maydis 521]
Length = 658
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y + S + P TY+G+T PRR +QHNG L GA + RPW CI+ GF
Sbjct: 14 YACYFLRSLSTPGTTYIGSTPAPPRRKRQHNGHLTQGAYKTSRARPWEMECIVYGF 69
>gi|452982250|gb|EME82009.1| hypothetical protein MYCFIDRAFT_99264, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 322
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++ YL+ S TY+G+T N PRRL+QHNGE +GGA + + RPW C++ GF
Sbjct: 6 YACYLLRSIARHSSTYIGSTPNPPRRLRQHNGESKGGAVRTSRDSLRPWEMTCLVTGF 63
>gi|342319183|gb|EGU11133.1| Structure-specific endonuclease subunit SLX1 [Rhodotorula glutinis
ATCC 204091]
Length = 686
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNP--PIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S N P TY+G+T + PRR KQH G+ GGA ++ GRPW I+ GF
Sbjct: 36 YACYLLKSYNVKRPNMTYIGSTPDPPRRFKQHMGDRIGGALQTRFGRPWEMEAIVHGF 93
>gi|343428549|emb|CBQ72079.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 652
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y + S + P TY+G+T PRR +QHNG+L GA + RPW CI+ GF
Sbjct: 14 YACYFLRSLSSPGITYIGSTPAPPRRKRQHNGDLTQGAYKTARARPWEMECIVYGF 69
>gi|255553347|ref|XP_002517715.1| nuclease, putative [Ricinus communis]
gi|223543113|gb|EEF44647.1| nuclease, putative [Ricinus communis]
Length = 413
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 35 QSQSKRTPNSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAG 92
QS ++ ++ YL+ S P K TY+G T N RR++QHNGE+R GA ++
Sbjct: 14 QSSAQEDEEEGKGFYACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRSGAFRTKKR 73
Query: 93 RPWISACIIQGF 104
RPW I GF
Sbjct: 74 RPWEMVFCIYGF 85
>gi|302912033|ref|XP_003050623.1| hypothetical protein NECHADRAFT_49413 [Nectria haematococca mpVI
77-13-4]
gi|256731560|gb|EEU44910.1| hypothetical protein NECHADRAFT_49413 [Nectria haematococca mpVI
77-13-4]
Length = 311
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
+ VY++ ST Y+G+T N PRRLKQHNGE RGGA A + RPW ++ GF
Sbjct: 12 YGVYVLRSTVRHASIYIGSTPNPPRRLKQHNGEARGGAVRTAREKLRPWEVMILVTGF 69
>gi|358382336|gb|EHK20008.1| hypothetical protein TRIVIDRAFT_77206 [Trichoderma virens Gv29-8]
Length = 305
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
VY++ ST P Y+G+T N PRRLKQHNGE +GGA + + RPW ++ GF
Sbjct: 14 VYVLRSTVRPASIYIGSTPNPPRRLKQHNGEAKGGAVRTSRDSLRPWEMIMLVSGF 69
>gi|340519368|gb|EGR49607.1| predicted protein [Trichoderma reesei QM6a]
Length = 305
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++VY++ ST YVG+T N PRRL+QHNGE +GGA + + RPW A ++ GF
Sbjct: 12 YAVYVLRSTVRHASIYVGSTPNPPRRLRQHNGEAKGGAVRTSRDSLRPWEMAIVVSGF 69
>gi|452841483|gb|EME43420.1| hypothetical protein DOTSEDRAFT_174260 [Dothistroma septosporum
NZE10]
Length = 405
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
++ YL+ S Y+G+T N PRRLKQHNG+ GGAK + + RPW +C++ GF
Sbjct: 12 YACYLLRSIARHSSLYIGSTPNPPRRLKQHNGDAGGGAKRTSKDSLRPWEISCLVTGF 69
>gi|259511470|sp|A6RYJ8.2|SLX1_BOTFB RecName: Full=Structure-specific endonuclease subunit slx1
Length = 425
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
+ YL+ ST YVG+T N RRL+QHNG ++GGA + G RPW ACI+ GF
Sbjct: 16 YGCYLLRSTIRHSALYVGSTPNPVRRLRQHNGLVKGGAVRTSRGNLRPWEMACIVTGF 73
>gi|358054364|dbj|GAA99290.1| hypothetical protein E5Q_05985 [Mixia osmundae IAM 14324]
Length = 595
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TY+G+T + PRR++QHNG+L GA ++ GRPW I+ GF
Sbjct: 85 RTYIGSTPDPPRRIRQHNGDLTAGAWKTRFGRPWEMEMIVHGF 127
>gi|440796842|gb|ELR17943.1| GIYYIG catalytic domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 297
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
R + YL+ S N + TY+G T N RR++QHNGEL GAK ++ RPW ++ GF
Sbjct: 26 RFFGCYLLTSRNEAYRRHTYIGFTVNPSRRIRQHNGELVQGAKRTRTKRPWEMVMVVYGF 85
>gi|347832591|emb|CCD48288.1| hypothetical protein [Botryotinia fuckeliana]
Length = 419
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
+ YL+ ST YVG+T N RRL+QHNG ++GGA + G RPW ACI+ GF
Sbjct: 11 YGCYLLRSTIRHSALYVGSTPNPVRRLRQHNGLVKGGAVRTSRGNLRPWEMACIVTGF 68
>gi|353239486|emb|CCA71396.1| related to SLX1-Subunit of a complex, with Slx4p, that hydrolyzes
5` branches from duplex DNA [Piriformospora indica DSM
11827]
Length = 428
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S P T Y+G+T + RRL+QHNGEL GA+ + RPW A ++ GF
Sbjct: 19 YACYLLKSVKSPTATATYIGSTLHPVRRLRQHNGELVSGARRTARHRPWDMAMLVHGF 76
>gi|449454983|ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
gi|449471301|ref|XP_004153269.1| PREDICTED: uncharacterized protein LOC101204996 [Cucumis sativus]
gi|449506301|ref|XP_004162709.1| PREDICTED: uncharacterized protein LOC101229010 [Cucumis sativus]
Length = 395
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+S YL+ S P K TY+G T N RR++QHNGE+R GA ++ RPW I GF
Sbjct: 34 FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGF 91
>gi|393244438|gb|EJD51950.1| hypothetical protein AURDEDRAFT_181521 [Auricularia delicata
TFB-10046 SS5]
Length = 704
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 24 SSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPIKTYVGTTTNFPRRLKQHNGE 81
+S + +P ++ S+S ++ ++ YL+ S T TY+G+T + PRR++QHNGE
Sbjct: 2 ASVAGSSPAKATSRSSLVHHAFPSFYACYLLKSRKTTSSTATYIGSTPHPPRRIRQHNGE 61
Query: 82 LRGGAKASQAGRPWISACIIQGF 104
++GGA ++ RPW +I GF
Sbjct: 62 IQGGAWKTRKSRPWEMNMLIYGF 84
>gi|389601512|ref|XP_003723181.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505073|emb|CBZ14723.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 701
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA + S+ GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCV 61
Query: 102 QGFHD 106
GF D
Sbjct: 62 SGFTD 66
>gi|303283126|ref|XP_003060854.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457205|gb|EEH54504.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 147
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YL+ S NP +K +YVG T N PRR++QHNG L GAK ++ RP ++ GF
Sbjct: 4 CYLLASLNPAMKGRSYVGFTVNPPRRIRQHNGALSAGAKKTRKLRPCEMLVVVHGF 59
>gi|146088867|ref|XP_001466168.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|259511402|sp|A4I1H7.1|SLX1_LEIIN RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|134070270|emb|CAM68607.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 705
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA + S+ GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCV 61
Query: 102 QGFHD 106
GF D
Sbjct: 62 SGFPD 66
>gi|392558768|gb|EIW51954.1| hypothetical protein TRAVEDRAFT_136355 [Trametes versicolor
FP-101664 SS1]
Length = 504
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPP--IKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S P TY+G+T + PRR++QHNGE+ GA ++ RPW+ I+ GF
Sbjct: 18 YACYLLKSVRTPKATATYIGSTPSPPRRIRQHNGEISQGAWKTKNSRPWVMQMIVHGF 75
>gi|398016558|ref|XP_003861467.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499693|emb|CBZ34767.1| hypothetical protein, conserved [Leishmania donovani]
Length = 705
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA + S+ GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCV 61
Query: 102 QGFHD 106
GF D
Sbjct: 62 SGFPD 66
>gi|400596856|gb|EJP64612.1| GIY-YIG catalytic domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 309
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNGE +GGA A RPW ++ GF
Sbjct: 12 YTVYVLRSTVRHASLYIGSTPNPPRRLKQHNGETKGGAARTARDKLRPWEMVALVSGF 69
>gi|346320106|gb|EGX89707.1| GIY-YIG catalytic domain containing protein [Cordyceps militaris
CM01]
Length = 364
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNGE +GGA A RPW ++ GF
Sbjct: 12 YTVYVLRSTIRHASLYIGSTPNPPRRLKQHNGETKGGAARTARDKLRPWEMVALVSGF 69
>gi|302757311|ref|XP_002962079.1| hypothetical protein SELMODRAFT_66109 [Selaginella moellendorffii]
gi|300170738|gb|EFJ37339.1| hypothetical protein SELMODRAFT_66109 [Selaginella moellendorffii]
Length = 182
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHD 106
+ YL+ S NP K TY+G T N RR++QHNGE+ GA ++ RPW + GF
Sbjct: 2 YGCYLLRSINPRFKGQTYIGFTVNPRRRIRQHNGEITCGAFRTKKKRPWEMVLCVYGFSS 61
Query: 107 QSD 109
++D
Sbjct: 62 KTD 64
>gi|358392649|gb|EHK42053.1| hypothetical protein TRIATDRAFT_16910, partial [Trichoderma
atroviride IMI 206040]
Length = 301
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++VY++ ST YVG+T N PRRLKQHNGE +GGA + ++ RPW ++ GF
Sbjct: 12 YAVYVLRSTVRSKSIYVGSTPNPPRRLKQHNGEAKGGAVRTSRESLRPWEMIVLVTGF 69
>gi|224145473|ref|XP_002325655.1| predicted protein [Populus trichocarpa]
gi|222862530|gb|EEF00037.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S P K TY+G T N RR++QHNGELR GA ++ RPW + GF
Sbjct: 28 FACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGELRSGACRTKKRRPWEMVICVYGF 85
>gi|224124772|ref|XP_002319418.1| predicted protein [Populus trichocarpa]
gi|222857794|gb|EEE95341.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S P K TY+G T N RR++QHNGELR GA ++ RPW I GF
Sbjct: 13 FACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGELRSGACRTKKRRPWEMVFCIYGF 70
>gi|452824922|gb|EME31922.1| endo/excinuclease amino terminal domain-containing protein
[Galdieria sulphuraria]
Length = 384
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 9 FPAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLI--ISTNPPIK--TY 64
FP ++ R N K ++++ P + + YL+ +S +P K TY
Sbjct: 33 FPELRVRLEN--KFNTTTQCPASSLEGDLHCHEETHSDGFYCCYLLRSLSEHPYGKNRTY 90
Query: 65 VGTTTNFPRRLKQHNGELR-GGAKASQAGRPWISACIIQGFHDQSD 109
+G TTN RRL+QHNG+L+ GGA ++ RPW I GF +++
Sbjct: 91 IGFTTNPARRLRQHNGDLKAGGALRTKCFRPWQMVLFIHGFETKTE 136
>gi|398392844|ref|XP_003849881.1| hypothetical protein MYCGRDRAFT_87006 [Zymoseptoria tritici IPO323]
gi|339469759|gb|EGP84857.1| hypothetical protein MYCGRDRAFT_87006 [Zymoseptoria tritici IPO323]
Length = 406
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++ YL+ S TY+G+T N PRRLKQHNGE +GGA + RPW C++ GF
Sbjct: 12 YACYLLRSIARHSSTYIGSTPNPPRRLKQHNGEAKGGAVRTSRDTLRPWEMTCLVTGF 69
>gi|328771142|gb|EGF81182.1| hypothetical protein BATDEDRAFT_87437 [Batrachochytrium
dendrobatidis JAM81]
Length = 447
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPP--IKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+S YL+ S P I Y+G+T + RRL+QHNG ++GGA+ + RPW I+ GF
Sbjct: 8 YSCYLLRSCQPGRRIPAYIGSTLDPSRRLRQHNGLIKGGAQQTIKWRPWEMVAIVYGF 65
>gi|389746267|gb|EIM87447.1| hypothetical protein STEHIDRAFT_139121 [Stereum hirsutum FP-91666
SS1]
Length = 754
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPP--IKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+S YL+ S P TY+G+T N PRR++QHNGE+ GA ++ RPW+ ++ GF
Sbjct: 21 YSCYLLKSHWIPRSTVTYIGSTPNPPRRIRQHNGEITQGAWKTKNKRPWVMQMVVYGF 78
>gi|380496493|emb|CCF31730.1| GIY-YIG catalytic domain-containing protein [Colletotrichum
higginsianum]
Length = 307
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNGE RGGA + + RPW ++ GF
Sbjct: 12 YTVYVLRSTVRHASLYIGSTPNPPRRLKQHNGEARGGAARTSRMSLRPWEMVGLVSGF 69
>gi|115471265|ref|NP_001059231.1| Os07g0230500 [Oryza sativa Japonica Group]
gi|23617258|dbj|BAC20925.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50510284|dbj|BAD31692.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113610767|dbj|BAF21145.1| Os07g0230500 [Oryza sativa Japonica Group]
gi|125599613|gb|EAZ39189.1| hypothetical protein OsJ_23615 [Oryza sativa Japonica Group]
Length = 441
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S P K TY+G T N RR++QHNGE+R GA ++ GRPW I GF
Sbjct: 64 FCCYLLRSLCPRRKGSTYIGFTVNPRRRIRQHNGEIRCGAWQTKRGRPWEMVLCIYGF 121
>gi|310800690|gb|EFQ35583.1| GIY-YIG catalytic domain-containing protein [Glomerella graminicola
M1.001]
Length = 306
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNGE RGGA + + RPW ++ GF
Sbjct: 12 YTVYILRSTVRHASLYIGSTPNPPRRLKQHNGEARGGAARTSRLSLRPWEMVGLVSGF 69
>gi|326480673|gb|EGE04683.1| GIY-YIG catalytic domain-containing protein [Trichophyton equinum
CBS 127.97]
Length = 389
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 SSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR 83
SS SSP P S+ +K P + VYL+ S Y+G+T N RRL QHNG ++
Sbjct: 4 SSRSSPAPGNSRESAKGIPPF----YCVYLLRSAVRHASLYIGSTPNPARRLAQHNGHIK 59
Query: 84 GGAKAS--QAGRPWISACIIQGF 104
GGA + + RPW I+ GF
Sbjct: 60 GGAHRTHREKLRPWEMVMIVSGF 82
>gi|123449980|ref|XP_001313690.1| GIY-YIG catalytic domain containing protein [Trichomonas vaginalis
G3]
gi|121895582|gb|EAY00761.1| GIY-YIG catalytic domain containing protein [Trichomonas vaginalis
G3]
Length = 249
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 51 VYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
Y++ S NP KT Y+G T N PRR+KQHNG GGA + RPW ++ GF
Sbjct: 7 CYILRSQNPQYKTHCYIGFTVNPPRRIKQHNGARVGGAFKTHTMRPWEMTLVVWGF 62
>gi|256090806|ref|XP_002581372.1| hypothetical protein [Schistosoma mansoni]
gi|360042988|emb|CCD78399.1| hypothetical protein Smp_106040 [Schistosoma mansoni]
Length = 225
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ Y+++S NP KTY+G T N RR++QHN G L+GGAK++ PW I+ GF
Sbjct: 22 YGCYILLSLNPKFRGKTYIGFTVNPKRRIRQHNAGCLKGGAKSTAGKGPWEMVLIVYGF 80
>gi|50556574|ref|XP_505695.1| YALI0F21131p [Yarrowia lipolytica]
gi|74632389|sp|Q6C0W7.1|SLX1_YARLI RecName: Full=Structure-specific endonuclease subunit SLX1
gi|49651565|emb|CAG78504.1| YALI0F21131p [Yarrowia lipolytica CLIB122]
Length = 288
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQAG--RPWISACIIQGF 104
+ VYL+ ST P+ YVG+T N RR++QHNG+L+ GGA ++ RPW I+ GF
Sbjct: 9 YGVYLLQSTKKPLSCYVGSTPNPFRRIRQHNGDLKAGGAWRTKRAHLRPWSMVLIVNGF 67
>gi|340381878|ref|XP_003389448.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
[Amphimedon queenslandica]
Length = 274
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGF 104
VY ++S NP K TY+G T N RRLKQHNG + +GGA+ + PW I+ GF
Sbjct: 28 VYFLLSKNPKYKGRTYIGYTVNPIRRLKQHNGGIKKGGARKTSGRGPWDMILIVHGF 84
>gi|67594835|ref|XP_665907.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656778|gb|EAL35679.1| hypothetical protein Chro.20460, partial [Cryptosporidium hominis]
Length = 233
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQG 103
SN + Y ++S +Y+G + N RRL+QHNGE++ GAK +++G PW + G
Sbjct: 3 SNIQLHYCYFLLSEAKKKASYIGYSVNPCRRLRQHNGEIKKGAKKTKSGVPWNLGICVGG 62
Query: 104 FHDQ 107
F D+
Sbjct: 63 FPDR 66
>gi|449015588|dbj|BAM78990.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 331
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 44 SNSRSWSVYLIISTNPPIK----TYVGTTTNFPRRLKQHNGELRG-GAKASQAGRPWISA 98
S++ + YL++S + + TY+G TT+ RRL+QHNGEL+G GA ++A RPW
Sbjct: 42 SSTERYCCYLLVSESTDKRARNRTYIGFTTDPSRRLRQHNGELKGAGAHRTRAFRPWRLL 101
Query: 99 CIIQGFHDQ 107
++GF Q
Sbjct: 102 IFVEGFRSQ 110
>gi|299472046|emb|CBN80129.1| endo/excinuclease amino terminal domain-containing protein
[Ectocarpus siliculosus]
Length = 350
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 42 PNSNSRS--WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWIS 97
P +N R + YL+ S +P K TY+G T + RR++QHNG++ GGA ++ RPW
Sbjct: 2 PKANPRKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGDIIGGAFRTKRKRPWDM 61
Query: 98 ACIIQGF 104
I+ GF
Sbjct: 62 VAIVHGF 68
>gi|76154303|gb|AAX25793.2| SJCHGC08377 protein [Schistosoma japonicum]
Length = 134
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ Y+++S NP + TY+G T N RR++QHN G L+GGAK++ PW I+ GF
Sbjct: 22 YGCYILLSLNPNFRGRTYIGFTVNPKRRIRQHNAGFLKGGAKSTAGKGPWEMVLIVHGF 80
>gi|121718366|ref|XP_001276188.1| GIY-YIG catalytic domain protein [Aspergillus clavatus NRRL 1]
gi|259511391|sp|A1C4Z4.1|SLX1_ASPCL RecName: Full=Structure-specific endonuclease subunit slx1
gi|119404386|gb|EAW14762.1| GIY-YIG catalytic domain protein [Aspergillus clavatus NRRL 1]
Length = 434
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW I++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLTQHNGVVKGGARRTAAEKLRPWEMVMIVEGF 73
>gi|226468358|emb|CAX69856.1| Structure-specific endonuclease SLX1 [Schistosoma japonicum]
Length = 279
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ Y+++S NP + TY+G T N RR++QHN G L+GGAK++ PW I+ GF
Sbjct: 22 YGCYILLSLNPNFRGRTYIGFTVNPKRRIRQHNAGFLKGGAKSTAGKGPWEMVLIVHGF 80
>gi|66358858|ref|XP_626607.1| holiday junction resolvase, S1x1p, URI domain nuclease
[Cryptosporidium parvum Iowa II]
gi|74777550|sp|Q5CT62.1|SLX1_CRYPI RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|46227695|gb|EAK88615.1| holiday junction resolvase, S1x1p, URI domain nuclease
[Cryptosporidium parvum Iowa II]
Length = 410
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQG 103
SN + Y ++S +Y+G + N RRL+QHNGE++ GAK +++G PW + G
Sbjct: 3 SNIQLHYCYFLLSEAKKKASYIGYSVNPCRRLRQHNGEIKKGAKKTKSGVPWNLGICVGG 62
Query: 104 FHDQ 107
F D+
Sbjct: 63 FPDR 66
>gi|296422032|ref|XP_002840567.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636785|emb|CAZ84758.1| unnamed protein product [Tuber melanosporum]
Length = 431
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 31 PIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--A 88
P+ + + P + VYL+ ST P Y+G+T + RRL QHNG+ +GGA+ +
Sbjct: 32 PLTRAERVRMEPLEMPVFYCVYLLRSTVRPKSFYIGSTPDPRRRLAQHNGQTKGGAERTS 91
Query: 89 SQAGRPWISACIIQGF 104
+ RPW CI+ GF
Sbjct: 92 RENLRPWEMTCIVSGF 107
>gi|327301611|ref|XP_003235498.1| hypothetical protein TERG_04552 [Trichophyton rubrum CBS 118892]
gi|326462850|gb|EGD88303.1| hypothetical protein TERG_04552 [Trichophyton rubrum CBS 118892]
Length = 389
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 SSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR 83
+S SSP P + +K P + VYL+ ST Y+G+T N RRL QHNG ++
Sbjct: 4 TSRSSPAPGNVKESAKGIPPF----YCVYLLRSTVRHASLYIGSTPNPARRLAQHNGRIK 59
Query: 84 GGAKAS--QAGRPWISACIIQGF 104
GGA + + RPW I+ GF
Sbjct: 60 GGAHRTHREKLRPWEMVMIVSGF 82
>gi|402223379|gb|EJU03443.1| hypothetical protein DACRYDRAFT_49905, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 101
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S + P TY+G+T N RR++QHNGEL GA ++ RPW+ I+ GF
Sbjct: 19 YACYLLKSLSSPRSRTTYIGSTPNPLRRIRQHNGELTQGAWKTRQHRPWVMVMIVYGF 76
>gi|343957956|emb|CBY93775.1| putative slx1 protein [Glomus diaphanum]
Length = 197
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 33 RSQSQSKRTPNSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQ 90
+ Q + T + YL+ S +P K +Y+G+T + RRL+QHNGE+ GAK +
Sbjct: 4 KENHQLETTDLKYEEFYCCYLLRSLSPKYKQTSYIGSTNDPKRRLRQHNGEIASGAKKTS 63
Query: 91 AGRPWISACIIQGF 104
RPW + GF
Sbjct: 64 NKRPWEMILFVYGF 77
>gi|290562980|gb|ADD38884.1| Structure-specific endonuclease subunit slx1 [Lepeophtheirus
salmonis]
Length = 251
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGFH 105
+ YL++S NP K YVG T + RRLKQHN G GGA+ + A PW ++QGF
Sbjct: 11 FGCYLLMSENPKYKGRMYVGFTVDPVRRLKQHNAGSAFGGARRTSAKGPWTMVLLVQGFP 70
Query: 106 DQ 107
+Q
Sbjct: 71 NQ 72
>gi|302408587|ref|XP_003002128.1| GIY-YIG catalytic domain containing protein [Verticillium
albo-atrum VaMs.102]
gi|261359049|gb|EEY21477.1| GIY-YIG catalytic domain containing protein [Verticillium
albo-atrum VaMs.102]
Length = 454
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNG RGGA + + RPW I+ GF
Sbjct: 199 YTVYILRSTVRHASLYIGSTPNPPRRLKQHNGLARGGAARTSRSSLRPWEMIAIVSGF 256
>gi|226468360|emb|CAX69857.1| Structure-specific endonuclease SLX1 [Schistosoma japonicum]
Length = 278
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ Y+++S NP + TY+G T N RR++QHN G L+GGAK++ PW I+ GF
Sbjct: 21 YGCYILLSLNPNFRGRTYIGFTVNPKRRIRQHNAGFLKGGAKSTAGKGPWEMVLIVHGF 79
>gi|326469001|gb|EGD93010.1| GIY-YIG catalytic domain containing protein [Trichophyton tonsurans
CBS 112818]
Length = 208
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 SSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR 83
SS SSP P S+ +K P + VYL+ S Y+G+T N RRL QHNG ++
Sbjct: 4 SSRSSPAPGNSRESAKGIPPF----YCVYLLRSAVRHASLYIGSTPNPARRLAQHNGRIK 59
Query: 84 GGAKAS--QAGRPWISACIIQGF 104
GGA + + RPW I+ GF
Sbjct: 60 GGAHRTHREKLRPWEMVMIVSGF 82
>gi|322712788|gb|EFZ04361.1| hypothetical protein MAA_01435 [Metarhizium anisopliae ARSEF 23]
Length = 228
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNGE +GGA + RPW ++ GF
Sbjct: 12 YTVYVLRSTVRHASLYIGSTPNPPRRLKQHNGESKGGAARTSRDNLRPWEMIVLVSGF 69
>gi|451853886|gb|EMD67179.1| hypothetical protein COCSADRAFT_285650 [Cochliobolus sativus
ND90Pr]
Length = 368
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-AFYIGSTPNPARRLGQHNGSTKGGAKRTSMQGKRPWEMTCIVTGF 72
>gi|346975522|gb|EGY18974.1| GIY-YIG catalytic domain containing protein [Verticillium dahliae
VdLs.17]
Length = 324
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNG RGGA + + RPW I+ GF
Sbjct: 12 YTVYILRSTVRHASLYIGSTPNPPRRLKQHNGLARGGAARTSRSSLRPWEMIAIVSGF 69
>gi|168052727|ref|XP_001778791.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669797|gb|EDQ56377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 543
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 WSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHD 106
++ YL+ S NP K Y+G T N RR++QHNGEL GA + RPW + GF
Sbjct: 68 FACYLLTSLNPRYKGCHYIGFTVNPRRRIRQHNGELTSGAWRTHRKRPWDMILCVYGFAC 127
Query: 107 QSD 109
Q +
Sbjct: 128 QVE 130
>gi|170587436|ref|XP_001898482.1| GIY-YIG catalytic domain containing protein [Brugia malayi]
gi|259511396|sp|A8PV03.1|SLX1_BRUMA RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|158594106|gb|EDP32696.1| GIY-YIG catalytic domain containing protein [Brugia malayi]
Length = 333
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 20 SKLSSSSSSPTPIRSQSQSKR-----TPNSNSRSWSVYLIISTNP----PIKTYVGTTTN 70
SK+ SSS I+ + KR P+ + VY ++S +P + Y+G T N
Sbjct: 36 SKILCRSSSQEVIQENERKKRGKNYAVPSILDDFFGVYCLLSRSPNRYFKNRCYIGYTVN 95
Query: 71 FPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
RR++QHN G+ GGAK + PW CII GF
Sbjct: 96 PNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIHGF 130
>gi|336266648|ref|XP_003348091.1| SLX1 protein [Sordaria macrospora k-hell]
gi|380091026|emb|CCC11232.1| putative SLX1 protein [Sordaria macrospora k-hell]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA 86
S T S + ++ P ++VY++ S Y+G+T + PRRL QHNG +GGA
Sbjct: 5 SKETAKMSTNTTQLQPKPIPALYTVYILRSQPRHASLYIGSTPHPPRRLSQHNGLAKGGA 64
Query: 87 --KASQAGRPWISACIIQGF 104
+ ++ RPW C++ GF
Sbjct: 65 YRTSKKSLRPWDMVCLVSGF 84
>gi|225718864|gb|ACO15278.1| Structure-specific endonuclease SLX1 [Caligus clemensi]
Length = 259
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGFH 105
+ YL+I NP K YVG T + RRLKQHN G GGA+ + A PW ++QGF
Sbjct: 11 FGCYLLICENPKYKGRMYVGFTVDPVRRLKQHNAGAAFGGARRTSAKGPWSMVLLVQGFP 70
Query: 106 DQ 107
+Q
Sbjct: 71 NQ 72
>gi|328849268|gb|EGF98452.1| hypothetical protein MELLADRAFT_40851 [Melampsora larici-populina
98AG31]
Length = 245
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T + PRR++QHNG+++GGA ++ RPW I GF
Sbjct: 49 RTYVGSTPDPPRRIRQHNGQIKGGAFRTKYYRPWEMELICYGF 91
>gi|145354855|ref|XP_001421690.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581928|gb|ABO99983.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 370
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHD 106
++ YL++S +P K +YVG TTN PRRL QHNG + GAK + RP ++ GF D
Sbjct: 20 YACYLVVSLDPSKKGKSYVGFTTNPPRRLAQHNGAIANGAKYTMRLRPCDMVLVVSGFSD 79
Query: 107 Q 107
+
Sbjct: 80 K 80
>gi|388853125|emb|CCF53299.1| uncharacterized protein [Ustilago hordei]
Length = 641
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y + S + P TY+G+T PRR +QHNG+L GA + RPW CI+ GF
Sbjct: 14 YACYFLRSLSSPGITYIGSTPAPPRRKRQHNGDLTQGAYKTARARPWEMECIVYGF 69
>gi|164661415|ref|XP_001731830.1| hypothetical protein MGL_1098 [Malassezia globosa CBS 7966]
gi|259511403|sp|A8PWH1.1|SLX1_MALGO RecName: Full=Structure-specific endonuclease subunit SLX1
gi|159105731|gb|EDP44616.1| hypothetical protein MGL_1098 [Malassezia globosa CBS 7966]
Length = 443
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 40 RTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISAC 99
RTP R + Y + S + P +TY+G+T + RRL+QHNG ++ GA ++ RPW
Sbjct: 10 RTP----RVYVCYCLRSLSRPNQTYIGSTPDPIRRLRQHNGLVKQGAFYTRMARPWTMDV 65
Query: 100 IIQGF 104
++ GF
Sbjct: 66 VVYGF 70
>gi|356537639|ref|XP_003537333.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Glycine max]
Length = 380
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S +P K TY+G T N RR++QHNGE+ GA ++ RPW I GF
Sbjct: 36 FACYLLTSLSPRFKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGF 93
>gi|406605113|emb|CCH43500.1| hypothetical protein BN7_3050 [Wickerhamomyces ciferrii]
Length = 335
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 31 PIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA-KAS 89
P SQ K+ +S + + YL+ S Y+G+T + RRL+QHNGEL+ GA K
Sbjct: 3 PSGSQGPRKKLAHSVPKFYGCYLLRSIPKQNSFYIGSTPDPVRRLRQHNGELKAGAYKTK 62
Query: 90 QAG-RPWISACIIQGFHDQ 107
+ G RPW I+ GF ++
Sbjct: 63 RKGFRPWEMIMIVHGFPNK 81
>gi|389629414|ref|XP_003712360.1| hypothetical protein MGG_04879 [Magnaporthe oryzae 70-15]
gi|351644692|gb|EHA52553.1| hypothetical protein MGG_04879 [Magnaporthe oryzae 70-15]
gi|440465449|gb|ELQ34769.1| GIY-YIG catalytic domain containing protein [Magnaporthe oryzae
Y34]
gi|440487668|gb|ELQ67443.1| GIY-YIG catalytic domain containing protein [Magnaporthe oryzae
P131]
Length = 365
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNGE +GGA + + RPW ++ GF
Sbjct: 12 YTVYILRSTVRHASLYIGSTPNPPRRLKQHNGEAKGGAARTCRPSLRPWEMVGLVSGF 69
>gi|300121504|emb|CBK22023.2| unnamed protein product [Blastocystis hominis]
Length = 122
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 52 YLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
YL+ S N + TY+G T N RR++QHN E++ GA + PW C++ GF D+ +
Sbjct: 6 YLLRSLNEKYRNSTYIGYTVNPKRRIRQHNREIKNGAFKTHRAMPWEMICVVCGFPDKRE 65
>gi|294655202|ref|XP_457305.2| DEHA2B08030p [Debaryomyces hansenii CBS767]
gi|259511468|sp|Q6BWW4.2|SLX1_DEBHA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|199429766|emb|CAG85309.2| DEHA2B08030p [Debaryomyces hansenii CBS767]
Length = 346
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGA-KASQAG-RPWISACIIQGF 104
+ VYL+ S P Y+G+T N RRL+QHNGEL+ GGA + ++G RPW C++ F
Sbjct: 24 YGVYLLRSVPKPKSFYIGSTPNPQRRLRQHNGELKNGGAYRTKKSGFRPWEMICLVYNF 82
>gi|326492143|dbj|BAJ98296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 52 YLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YL+ S P K TY+G T N RR++QHNGELR GA ++ GRPW I GF
Sbjct: 51 YLLRSLCPRSKSRTYIGFTVNPRRRIRQHNGELRCGAWRTKRGRPWEMMLCIYGF 105
>gi|406860390|gb|EKD13449.1| GIY-YIG catalytic domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 428
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
+ YL+ ST YVG+T N RRL+QHNG +GGA + Q+ RPW CI+ GF
Sbjct: 11 YCCYLLRSTVRGSSVYVGSTPNPVRRLRQHNGVAKGGAVRTSRQSLRPWAMTCIVTGF 68
>gi|221090562|ref|XP_002170246.1| PREDICTED: structure-specific endonuclease subunit slx1-like [Hydra
magnipapillata]
Length = 302
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQGF 104
+ VY++ + NP K Y+G T N RR++QHN E++GGA + R PW II GF
Sbjct: 16 YGVYILYNINPKYKGSVYIGFTVNPERRIRQHNREIKGGALKTGNNRGPWDMVLIIHGF 74
>gi|254515490|ref|ZP_05127550.1| putative GIY-YIG catalytic domain protein [gamma proteobacterium
NOR5-3]
gi|219675212|gb|EED31578.1| putative GIY-YIG catalytic domain protein [gamma proteobacterium
NOR5-3]
Length = 94
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP----WISAC 99
S S WSVY++ + + Y G T + RRL+QHNGEL GGA+ ++ RP W C
Sbjct: 2 SESLPWSVYILRCADGSL--YTGVTRDLARRLRQHNGELVGGAQYTRGRRPVEAIWAEEC 59
>gi|169616053|ref|XP_001801442.1| hypothetical protein SNOG_11198 [Phaeosphaeria nodorum SN15]
gi|160703102|gb|EAT81697.2| hypothetical protein SNOG_11198 [Phaeosphaeria nodorum SN15]
Length = 313
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-SYYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPWEMTCIVTGF 72
>gi|116199003|ref|XP_001225313.1| hypothetical protein CHGG_07657 [Chaetomium globosum CBS 148.51]
gi|121780905|sp|Q2GWJ7.1|SLX1_CHAGB RecName: Full=Structure-specific endonuclease subunit SLX1
gi|88178936|gb|EAQ86404.1| hypothetical protein CHGG_07657 [Chaetomium globosum CBS 148.51]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
++VY++ ST YVG+T N PRRL QHNG +RGGA + G RPW ++ GF
Sbjct: 12 YTVYILRSTVRHASFYVGSTPNPPRRLSQHNGLVRGGAVRTSRGNLRPWEMIILVSGF 69
>gi|367016849|ref|XP_003682923.1| hypothetical protein TDEL_0G03450 [Torulaspora delbrueckii]
gi|359750586|emb|CCE93712.1| hypothetical protein TDEL_0G03450 [Torulaspora delbrueckii]
Length = 310
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 26 SSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RG 84
SSSP Q + R P+ + YL+ S Y+G+T N RRL+QHNG L RG
Sbjct: 2 SSSPVNETDQCEQHRVPDF----YCCYLLQSICKRQSFYIGSTPNPVRRLRQHNGILARG 57
Query: 85 GAKASQAG--RPWISACIIQGF 104
GA ++ G RPW ++ GF
Sbjct: 58 GAYRTKRGNTRPWEMILLVHGF 79
>gi|58259493|ref|XP_567159.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106707|ref|XP_777895.1| hypothetical protein CNBA3640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819472|sp|P0CN81.1|SLX1_CRYNB RecName: Full=Structure-specific endonuclease subunit SLX1
gi|338819473|sp|P0CN80.1|SLX1_CRYNJ RecName: Full=Structure-specific endonuclease subunit SLX1
gi|50260595|gb|EAL23248.1| hypothetical protein CNBA3640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223296|gb|AAW41340.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 487
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T + PRR++QHNGEL+ GA ++ RPW I+ GF
Sbjct: 44 RTYVGSTPDPPRRIRQHNGELKQGAWSTSRHRPWEMQMIVYGF 86
>gi|259511489|sp|Q0UAL6.3|SLX1_PHANO RecName: Full=Structure-specific endonuclease subunit SLX1
Length = 366
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-SYYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPWEMTCIVTGF 72
>gi|2347198|gb|AAC16937.1| hypothetical protein [Arabidopsis thaliana]
Length = 324
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S +P K TY+G T N RR++QHNGE+ GA ++ RPW I GF
Sbjct: 28 FACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHNGEITSGAWRTKKKRPWEMVLCIYGF 85
>gi|451927323|gb|AGF85201.1| nuclease superfamily protein [Moumouvirus goulette]
Length = 172
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGE----LRGGAKASQAGRPWISACIIQG 103
+W YLI+S + TY+G+T N P+RL HN +R GAK ++A + W+ II G
Sbjct: 3 NWVCYLIMSLDSN-DTYIGSTNNQPKRLNAHNNNNPDIVRKGAKRTRA-QTWVPVIIISG 60
Query: 104 FHDQ 107
FHD+
Sbjct: 61 FHDK 64
>gi|42569467|ref|NP_180594.2| GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana]
gi|51968920|dbj|BAD43152.1| hypothetical protein [Arabidopsis thaliana]
gi|51968928|dbj|BAD43156.1| hypothetical protein [Arabidopsis thaliana]
gi|51971411|dbj|BAD44370.1| hypothetical protein [Arabidopsis thaliana]
gi|66792676|gb|AAY56440.1| At2g30350 [Arabidopsis thaliana]
gi|330253280|gb|AEC08374.1| GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana]
Length = 368
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S +P K TY+G T N RR++QHNGE+ GA ++ RPW I GF
Sbjct: 28 FACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHNGEITSGAWRTKKKRPWEMVLCIYGF 85
>gi|307104846|gb|EFN53098.1| hypothetical protein CHLNCDRAFT_26241 [Chlorella variabilis]
Length = 208
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQ 107
YL+ S NP K +YVG T N RR++QHNGEL GA ++ RPW ++ GF Q
Sbjct: 7 CYLLESKNPRAKGRSYVGFTVNPRRRIRQHNGELVNGAAKTKRHRPWEMVLVVFGFPSQ 65
>gi|357119099|ref|XP_003561283.1| PREDICTED: uncharacterized protein LOC100832723 [Brachypodium
distachyon]
Length = 393
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 52 YLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YL+ S P K TY+G T N RR++QHNGELR GA ++ GRPW I GF
Sbjct: 54 YLLRSLCPRRKGHTYIGFTVNPRRRIRQHNGELRCGAWRTKRGRPWEMVFCIHGF 108
>gi|396497704|ref|XP_003845040.1| similar to GIY-YIG catalytic domain containing protein
[Leptosphaeria maculans JN3]
gi|312221621|emb|CBY01561.1| similar to GIY-YIG catalytic domain containing protein
[Leptosphaeria maculans JN3]
Length = 354
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-AFYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPWEMTCIVTGF 72
>gi|443899495|dbj|GAC76826.1| GIY-YIG type nuclease [Pseudozyma antarctica T-34]
Length = 636
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQ 107
++ Y + S + P TY+G+T PRR +QHNG+L GA + RPW CI+ GF +
Sbjct: 14 YACYFLRSLSSPGITYIGSTPAPPRRKRQHNGDLTQGAWKTARSRPWEMECIVYGFSSK 72
>gi|156359771|ref|XP_001624938.1| predicted protein [Nematostella vectensis]
gi|259511405|sp|A7STV9.1|SLX1_NEMVE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|156211746|gb|EDO32838.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGF 104
VYL+ NP K TY+G T N RR+KQHNG + +GGA + +PW I+ GF
Sbjct: 12 GVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHGF 69
>gi|321249142|ref|XP_003191354.1| GIY-YIG type nuclease catalytic domain containing protein
[Cryptococcus gattii WM276]
gi|317457821|gb|ADV19567.1| GIY-YIG type nuclease catalytic domain containing protein
[Cryptococcus gattii WM276]
Length = 466
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T + PRRL+QHNGEL GA ++ RPW I+ GF
Sbjct: 43 RTYVGSTPDPPRRLRQHNGELTQGAWSTSRHRPWEMQMIVYGF 85
>gi|441432459|ref|YP_007354501.1| GIY-YIG nuclease superfamily protein [Acanthamoeba polyphaga
moumouvirus]
gi|440383539|gb|AGC02065.1| GIY-YIG nuclease superfamily protein [Acanthamoeba polyphaga
moumouvirus]
Length = 172
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGE----LRGGAKASQAGRPWISACIIQG 103
+W YLI+S + TY+G+T N P+RL HN +R GAK ++A + W+ II G
Sbjct: 3 NWVCYLIMSLDSN-DTYIGSTNNQPKRLNAHNNNNPDIVRKGAKRTRA-QTWVPVIIISG 60
Query: 104 FHDQ 107
FHD+
Sbjct: 61 FHDK 64
>gi|242047924|ref|XP_002461708.1| hypothetical protein SORBIDRAFT_02g006850 [Sorghum bicolor]
gi|241925085|gb|EER98229.1| hypothetical protein SORBIDRAFT_02g006850 [Sorghum bicolor]
Length = 386
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S P K TY+G T N RR++QHNGE+ GA ++ GRPW I GF
Sbjct: 57 FCCYLLRSLCPRSKSRTYIGFTVNPRRRIRQHNGEIVSGAWRTRRGRPWEMVLCIYGF 114
>gi|241955223|ref|XP_002420332.1| DNA replication structure-specific endonuclease subunit, putative
[Candida dubliniensis CD36]
gi|259511395|sp|B9WGW9.1|SLX1_CANDC RecName: Full=Structure-specific endonuclease subunit SLX1
gi|223643674|emb|CAX41407.1| DNA replication structure-specific endonuclease subunit, putative
[Candida dubliniensis CD36]
Length = 286
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ VY++ S P +TY+G+T + RRL+QHNG+L+ GGA ++ RPW ++ GF
Sbjct: 17 YGVYILKSIPKPRRTYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWTMVVLVHGF 75
>gi|348675415|gb|EGZ15233.1| hypothetical protein PHYSODRAFT_509109 [Phytophthora sojae]
Length = 176
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK---TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ P + TYVG T + RR++QHNGEL GAK ++ RPW ++ GF
Sbjct: 5 ACYLLTPVQAPQRLRCTYVGFTVDPTRRIRQHNGELANGAKRTRKFRPWEMIAVVHGF 62
>gi|410906777|ref|XP_003966868.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Takifugu rubripes]
Length = 272
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
VY++ TNP K Y+G T N RR+KQHN G +GGAK + PW II GF
Sbjct: 11 VYMLYCTNPKYKGRIYIGFTVNPERRIKQHNAGRHKGGAKRTSGRGPWEMLLIIHGF 67
>gi|125822492|ref|XP_001337124.1| PREDICTED: structure-specific endonuclease subunit slx1-like [Danio
rerio]
Length = 260
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VY++ TNP K Y+G T N RR+ QHN G RGGAK + PW II GF
Sbjct: 9 YGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEMVLIIHGF 67
>gi|366996066|ref|XP_003677796.1| hypothetical protein NCAS_0H01370 [Naumovozyma castellii CBS 4309]
gi|342303666|emb|CCC71447.1| hypothetical protein NCAS_0H01370 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 42 PNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISA 98
P + ++ + YL+ S + Y+G+T + P+RL+QHNG L +GGA + + RPW
Sbjct: 9 PKTRTQFYCCYLLQSISKRQSFYIGSTPDPPKRLRQHNGILSKGGAYRTRREGSRPWEMI 68
Query: 99 CIIQGF 104
CI+ GF
Sbjct: 69 CIVYGF 74
>gi|115433108|ref|XP_001216691.1| predicted protein [Aspergillus terreus NIH2624]
gi|121735324|sp|Q0CE14.1|SLX1_ASPTN RecName: Full=Structure-specific endonuclease subunit slx1
gi|114189543|gb|EAU31243.1| predicted protein [Aspergillus terreus NIH2624]
Length = 390
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIIST-NPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQA-GRPWISACIIQGF 104
+ YL+ ST N YVG+T N PRRL QHNG +GGAK + RPW +++GF
Sbjct: 16 YCCYLLRSTVNKRAGLYVGSTPNPPRRLPQHNGLSKGGAKKTATKNRPWEMVLLVEGF 73
>gi|429861440|gb|ELA36129.1| giy-yig catalytic domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 310
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
++VY++ ST Y+G+T PRRLKQHNGE RGGA + + RPW ++ GF
Sbjct: 12 YTVYILRSTVRHASLYIGSTPYPPRRLKQHNGEARGGAARTSRLSLRPWEMVGLVSGF 69
>gi|297745781|emb|CBI15837.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 38 SKRTPNSNSRS---WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAG 92
S+ T NS + ++ YL+ S +P K +Y+G T N RR++QHNGE+ GA ++
Sbjct: 11 SEETLNSEEKGDDFFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHNGEITCGAWKTKRK 70
Query: 93 RPWISACIIQGF 104
RPW I GF
Sbjct: 71 RPWEMVLCIYGF 82
>gi|301091067|ref|XP_002895726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097044|gb|EEY55096.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 178
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK---TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ PP + +Y+G T + RR++QHNGEL GAK ++ RPW ++ GF
Sbjct: 5 ACYLLTPEQPPQRLRCSYIGFTVSPTRRIRQHNGELVNGAKRTRKFRPWEMIAVVHGF 62
>gi|359479058|ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
2-like [Vitis vinifera]
Length = 364
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 38 SKRTPNSNSRS---WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAG 92
S+ T NS + ++ YL+ S +P K +Y+G T N RR++QHNGE+ GA ++
Sbjct: 11 SEETLNSEEKGDDFFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHNGEITCGAWKTKRK 70
Query: 93 RPWISACIIQGF 104
RPW I GF
Sbjct: 71 RPWEMVLCIYGF 82
>gi|261326785|emb|CBH09758.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 511
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQA-GRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA+ ++ GRPW+ +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHNGELVNGARRTKRNGRPWLLLMCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|340052585|emb|CCC46866.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 536
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQA-GRPWISACII 101
++R VYL+ S NP YVG T N RRL+QHNGEL GA +++ GRPW+ +
Sbjct: 2 DTRFHCVYLLTSLNPQCSGAYYVGYTVNPIRRLRQHNGELVNGAHRTRSRGRPWLLLLCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|254283637|ref|ZP_04958605.1| GIY-YIG catalytic domain protein [gamma proteobacterium NOR51-B]
gi|219679840|gb|EED36189.1| GIY-YIG catalytic domain protein [gamma proteobacterium NOR51-B]
Length = 94
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 36 SQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+Q R+P+++ W VYL+ T+ + Y G T + RRL+QHNG+L GGA+ + A RP
Sbjct: 4 TQKARSPSTHP--WWVYLLRCTDGSL--YCGVTNDLQRRLRQHNGDLAGGARFTGARRP 58
>gi|212723530|ref|NP_001132010.1| uncharacterized protein LOC100193415 [Zea mays]
gi|194693186|gb|ACF80677.1| unknown [Zea mays]
gi|195627240|gb|ACG35450.1| hypothetical protein [Zea mays]
gi|414884064|tpg|DAA60078.1| TPA: hypothetical protein ZEAMMB73_892976 [Zea mays]
Length = 377
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S P K TY+G T N RR++QHNGE+ GA ++ GRPW I GF
Sbjct: 54 FCCYLLRSLCPRSKGRTYIGFTVNPRRRIRQHNGEIVSGAWRTRRGRPWEMVLCIYGF 111
>gi|358340281|dbj|GAA28933.2| structure-specific endonuclease subunit SLX1 [Clonorchis sinensis]
Length = 279
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ Y+++S NP + TY+G T N RR++QHN G ++GGAK++ PW I+ GF
Sbjct: 22 FGCYILVSLNPTARGRTYIGFTVNPNRRIRQHNGGRIKGGAKSTAGRGPWDMVLIVHGF 80
>gi|72386583|ref|XP_843716.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74831338|sp|Q57XV5.1|SLX1_TRYB2 RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|62175421|gb|AAX69563.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800248|gb|AAZ10157.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 511
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQA-GRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA+ ++ GRPW+ +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHNGELVNGARRTKRNGRPWLLLMCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|451993660|gb|EMD86132.1| hypothetical protein COCHEDRAFT_1185965 [Cochliobolus
heterostrophus C5]
gi|451999806|gb|EMD92268.1| hypothetical protein COCHEDRAFT_1193777 [Cochliobolus
heterostrophus C5]
Length = 368
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGFHD 106
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-AFYIGSTPNPARRLGQHNGSTKGGAKRTSMQGKRPWEMTCIVTGFPS 74
Query: 107 QS 108
+S
Sbjct: 75 KS 76
>gi|407925804|gb|EKG18784.1| Excinuclease ABC C subunit [Macrophomina phaseolina MS6]
Length = 433
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
+ YL+ ST YVG+T N RRLKQHNG+ +GGA + + +PW ACI+ GF
Sbjct: 9 YCCYLLRSTVRHRYLYVGSTPNPVRRLKQHNGQAKGGAARTSRVSLQPWEMACIVTGF 66
>gi|405117753|gb|AFR92528.1| hypothetical protein CNAG_00395 [Cryptococcus neoformans var.
grubii H99]
Length = 459
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T + PRR++QHNGE++ GA ++ RPW I+ GF
Sbjct: 44 RTYVGSTPDPPRRIRQHNGEIKQGAWSTSRHRPWEMQMIVYGF 86
>gi|269467854|gb|EEZ79597.1| endonuclease [uncultured SUP05 cluster bacterium]
Length = 87
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W+VYL+ + + Y G T + RR++QHNGEL+GGAK ++A P
Sbjct: 7 WTVYLLRCRDNNL--YCGITNHLDRRIRQHNGELKGGAKYTRANGP 50
>gi|407406431|gb|EKF30795.1| hypothetical protein MOQ_005381 [Trypanosoma cruzi marinkellei]
Length = 530
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T + RRL+QHNGE+ GA + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCVGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|315049349|ref|XP_003174049.1| hypothetical protein MGYG_04223 [Arthroderma gypseum CBS 118893]
gi|311342016|gb|EFR01219.1| hypothetical protein MGYG_04223 [Arthroderma gypseum CBS 118893]
Length = 392
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 28 SPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK 87
SP P S+ +K P + YL+ ST Y+G+T N RRL QHNG ++GGA
Sbjct: 8 SPAPGSSRESAKGIPPF----YCAYLLRSTVRHASLYIGSTPNPARRLAQHNGRIKGGAH 63
Query: 88 AS--QAGRPWISACIIQGF 104
+ + RPW I+ GF
Sbjct: 64 RTHREKLRPWEMVMIVSGF 82
>gi|374620709|ref|ZP_09693243.1| putative endonuclease containing a URI domain [gamma
proteobacterium HIMB55]
gi|374303936|gb|EHQ58120.1| putative endonuclease containing a URI domain [gamma
proteobacterium HIMB55]
Length = 98
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 43 NSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP----WISA 98
S W VYL+ + Y G TT+ RR++QHNGE+ GGA ++ RP W A
Sbjct: 3 GEGSHQWFVYLMQCADGSF--YTGVTTDLARRVRQHNGEIVGGAGYTRGRRPVDLVWSEA 60
Query: 99 C 99
C
Sbjct: 61 C 61
>gi|85712602|ref|ZP_01043649.1| Predicted endonuclease containing a URI domain [Idiomarina
baltica OS145]
gi|85693593|gb|EAQ31544.1| Predicted endonuclease containing a URI domain [Idiomarina
baltica OS145]
Length = 101
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWI 96
W VY++ + + Y G TT RR++QHNGEL GGA+ +Q+ RP +
Sbjct: 22 WYVYMVECGDRSL--YTGVTTCLERRIRQHNGELSGGARYTQSRRPVV 67
>gi|71416769|ref|XP_810370.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|122019980|sp|Q4D7L5.1|SLX11_TRYCC RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
1
gi|70874889|gb|EAN88519.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 529
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T + RRL+QHNGE+ GA + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|150866688|ref|XP_001386362.2| hypothetical protein PICST_90954 [Scheffersomyces stipitis CBS
6054]
gi|259511463|sp|A3LZG5.2|SLX1_PICST RecName: Full=Structure-specific endonuclease subunit SLX1
gi|149387944|gb|ABN68333.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 336
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAG-RPWISACIIQGF 104
+ VYL+ S P Y+G+T + PRRL+QHNG+L+ G + +AG RPW ++ F
Sbjct: 23 YGVYLLQSEPKPSSFYIGSTPDPPRRLRQHNGDLKAGGAYRTKRAGFRPWRMLLVVYDF 81
>gi|392865563|gb|EAS31361.2| GIY-YIG catalytic domain-containing protein [Coccidioides immitis
RS]
Length = 383
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGAK + RPW ++ GF
Sbjct: 29 YCAYLLRSTVRHASLYIGSTPNPARRLAQHNGLIKGGAKRTHKDSLRPWEMVMLVSGF 86
>gi|342884725|gb|EGU84915.1| hypothetical protein FOXB_04496 [Fusarium oxysporum Fo5176]
Length = 302
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++VY++ ST Y+G+T + PRRL QHNG RGGA A RPW ++ GF
Sbjct: 12 YAVYVLRSTKRHASIYIGSTPHPPRRLNQHNGIARGGAVRTAKDTLRPWEVMILVTGF 69
>gi|212535130|ref|XP_002147721.1| GIY-YIG catalytic domain containing protein [Talaromyces marneffei
ATCC 18224]
gi|259511444|sp|B6QFH5.1|SLX1_PENMQ RecName: Full=Structure-specific endonuclease subunit slx1
gi|210070120|gb|EEA24210.1| GIY-YIG catalytic domain containing protein [Talaromyces marneffei
ATCC 18224]
Length = 389
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGFHD 106
+ YL+ S P Y+G+T + RRL+QHNG +GGAK ++ RPW II+GF
Sbjct: 19 YCCYLLRSVKKPSSLYIGSTPDPARRLEQHNGFTKGGAKRTERDTLRPWEMITIIEGFTS 78
Query: 107 QS 108
++
Sbjct: 79 RT 80
>gi|407847206|gb|EKG03035.1| hypothetical protein TCSYLVIO_005929 [Trypanosoma cruzi]
Length = 530
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T + RRL+QHNGE+ GA + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|255955701|ref|XP_002568603.1| Pc21g15940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|259511443|sp|B6HK90.1|SLX1_PENCW RecName: Full=Structure-specific endonuclease subunit slx1
gi|211590314|emb|CAP96491.1| Pc21g15940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 403
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG +GGAK A RPW +++GF
Sbjct: 14 YCCYLLRSTVRHASLYIGSTPNPIRRLPQHNGVAKGGAKRTARDKLRPWEMTLVVEGF 71
>gi|71406037|ref|XP_805589.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|122016031|sp|Q4CTY5.1|SLX12_TRYCC RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
2
gi|70869055|gb|EAN83738.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 530
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T + RRL+QHNGE+ GA + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>gi|350640180|gb|EHA28533.1| hypothetical protein ASPNIDRAFT_189208 [Aspergillus niger ATCC
1015]
Length = 424
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNGE +GGA+ A RPW +++GF
Sbjct: 16 YCCYLLRSTKQRTSLYIGSTPHPARRLAQHNGESKGGARKTAKDDKRPWEMVLLVEGF 73
>gi|125557750|gb|EAZ03286.1| hypothetical protein OsI_25432 [Oryza sativa Indica Group]
Length = 444
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 52 YLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YL+ S P K TY+G T N RR++QHNGE+R GA ++ GRPW I GF
Sbjct: 73 YLLRSLCPRRKGSTYIGFTVNPRRRIRQHNGEIRCGAWQTKRGRPWEMVLCIYGF 127
>gi|348544587|ref|XP_003459762.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Oreochromis niloticus]
Length = 280
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VY++ NP K Y+G T N RR+ QHN G RGGAK + PW II GF
Sbjct: 9 FGVYMLYCINPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEMVLIIHGF 67
>gi|320589966|gb|EFX02422.1| giy-yig catalytic domain containing protein [Grosmannia clavigera
kw1407]
Length = 400
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
++VY++ ST Y+G+T + PRRLKQHNGE+RGGA + RPW ++ GF
Sbjct: 12 YTVYILRSTMRHASLYIGSTPDPPRRLKQHNGEIRGGAARTSRVRLRPWEMVGLVSGF 69
>gi|329894566|ref|ZP_08270373.1| endo/excinuclease amino terminal domain protein [gamma
proteobacterium IMCC3088]
gi|328922974|gb|EGG30301.1| endo/excinuclease amino terminal domain protein [gamma
proteobacterium IMCC3088]
Length = 93
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP----WISAC 99
SW VY++ + + Y G TT+ RRL+QHNGE+ GGA+ ++ RP W C
Sbjct: 5 SWIVYILNCADGTL--YTGVTTDAERRLRQHNGEIVGGARYTRVRRPVAIVWQQGC 58
>gi|85103789|ref|XP_961602.1| hypothetical protein NCU01236 [Neurospora crassa OR74A]
gi|74625335|sp|Q9P737.1|SLX1_NEUCR RecName: Full=Structure-specific endonuclease subunit slx1
gi|7635779|emb|CAB88545.1| conserved hypothetical protein [Neurospora crassa]
gi|28923149|gb|EAA32366.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 402
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 34 SQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--A 91
S + ++ P ++VY++ S Y+G+T + PRRL QHNG +GGA + +
Sbjct: 2 STTTTQIQPKPIPALYTVYILRSQPRHASLYIGSTPHPPRRLSQHNGLAKGGAYRTSKIS 61
Query: 92 GRPWISACIIQGF 104
RPW C++ GF
Sbjct: 62 LRPWNMVCLVSGF 74
>gi|328350010|emb|CCA36410.1| hypothetical protein PP7435_Chr1-0249 [Komagataella pastoris CBS
7435]
Length = 209
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK---ASQAGRPWISACIIQGFH 105
+ VYL+ S P Y+G+T N RRL QHNG+L G + RPW + GFH
Sbjct: 2 YYVYLLQSQEKPQSFYIGSTNNPQRRLAQHNGDLAAGGAFRTKREGYRPWKMVLLCLGFH 61
>gi|317032048|ref|XP_001393894.2| structure-specific endonuclease subunit slx1 [Aspergillus niger CBS
513.88]
Length = 407
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNGE +GGA+ A RPW +++GF
Sbjct: 16 YCCYLLRSTKQRTSLYIGSTPHPARRLAQHNGESKGGARKTAKDDKRPWEMVLLVEGF 73
>gi|159468650|ref|XP_001692487.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278200|gb|EDP03965.1| predicted protein [Chlamydomonas reinhardtii]
Length = 332
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 52 YLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
YL+ S +P K TY+G T N RR++QHNG ++ GA + GRPW ++ GF
Sbjct: 8 YLLASQSPKHKGRTYIGFTVNPRRRIRQHNGLIKNGAWKTHKGRPWEMTLVLYGF 62
>gi|242792108|ref|XP_002481886.1| GIY-YIG catalytic domain containing protein [Talaromyces stipitatus
ATCC 10500]
gi|259511449|sp|B8MDD1.1|SLX1_TALSN RecName: Full=Structure-specific endonuclease subunit slx1
gi|218718474|gb|EED17894.1| GIY-YIG catalytic domain containing protein [Talaromyces stipitatus
ATCC 10500]
Length = 389
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
+ YL+ S P Y+G+T + RRL+QHNG +GGAK ++ RPW I++GF
Sbjct: 19 YCCYLLRSAKRPSALYIGSTPDPARRLEQHNGFAKGGAKRTERNTLRPWEMVAIVEGF 76
>gi|259511393|sp|A2QUJ2.1|SLX1_ASPNC RecName: Full=Structure-specific endonuclease subunit slx1
gi|134078447|emb|CAK40390.1| unnamed protein product [Aspergillus niger]
Length = 424
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNGE +GGA+ A RPW +++GF
Sbjct: 16 YCCYLLRSTKQRTSLYIGSTPHPARRLAQHNGESKGGARKTAKDDKRPWEMVLLVEGF 73
>gi|340959740|gb|EGS20921.1| hypothetical protein CTHT_0027600 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 359
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGG-AKASQAG-RPWISACIIQGF 104
++VY++ ST Y+G+T N PRRL QHNG +RGG AK S+ RPW ++ GF
Sbjct: 12 YTVYILRSTVRHASLYIGSTPNPPRRLSQHNGLVRGGAAKTSRYNLRPWEMIGLVSGF 69
>gi|313216805|emb|CBY38044.1| unnamed protein product [Oikopleura dioica]
Length = 330
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
YL+ S NP K TY+G T N RR+ QHN G +GGAK + PW+ + GF
Sbjct: 10 CYLLCSLNPSTKGRTYIGYTVNPQRRIMQHNSGVHKGGAKRTNMKGPWVWTVFVYGF 66
>gi|147901424|ref|NP_001090376.1| structure-specific endonuclease subunit slx1 [Xenopus laevis]
gi|123911486|sp|Q0IH86.1|SLX1_XENLA RecName: Full=Structure-specific endonuclease subunit slx1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|114108307|gb|AAI23265.1| Giyd1 protein [Xenopus laevis]
Length = 282
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ TNP K Y+G T N RR++QHN G+ +GGA + PW I+ GF
Sbjct: 9 YGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGF 67
>gi|391870669|gb|EIT79846.1| GIY-YIG type nuclease [Aspergillus oryzae 3.042]
Length = 403
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACIIQGFHDQ 107
+ YL+ ST Y+G+T + RRL QHNG RGGA K + RPW I++GF ++
Sbjct: 16 YCCYLLRSTVRQTSLYIGSTPHPSRRLAQHNGVSRGGARKTANDKRPWEMVLIVEGFMNR 75
Query: 108 S 108
+
Sbjct: 76 T 76
>gi|344231356|gb|EGV63238.1| hypothetical protein CANTEDRAFT_105926 [Candida tenuis ATCC 10573]
Length = 276
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 49 WSVYLIISTNPPIKT-YVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
++VYL+ + P +++ Y+G+T N RRL+QHNGEL+ GA ++ RPW A II GF
Sbjct: 24 YTVYLL-QSGPRLQSFYIGSTPNPCRRLRQHNGELQSGAYRTRKDGFRPWHFAAIITGF 81
>gi|254564951|ref|XP_002489586.1| Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from
duplex DNA [Komagataella pastoris GS115]
gi|238029382|emb|CAY67305.1| Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from
duplex DNA [Komagataella pastoris GS115]
Length = 249
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK---ASQAGRPWISACIIQGFH 105
+ VYL+ S P Y+G+T N RRL QHNG+L G + RPW + GFH
Sbjct: 2 YYVYLLQSQEKPQSFYIGSTNNPQRRLAQHNGDLAAGGAFRTKREGYRPWKMVLLCLGFH 61
>gi|89092692|ref|ZP_01165645.1| Predicted endonuclease containing a URI domain [Neptuniibacter
caesariensis]
gi|89083204|gb|EAR62423.1| Predicted endonuclease containing a URI domain [Oceanospirillum
sp. MED92]
Length = 85
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W VY++ + + Y G TT RR ++HNGEL+GGAK ++ RP
Sbjct: 4 WYVYIVRCADSSL--YTGVTTELKRREREHNGELQGGAKYTRVRRP 47
>gi|344301618|gb|EGW31923.1| hypothetical protein SPAPADRAFT_50535 [Spathaspora passalidarum
NRRL Y-27907]
Length = 292
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK---ASQAGRPWISACIIQGF 104
+ VYL+ S P YVG+T + RRL+QHNG+L+ G + RPW I+ F
Sbjct: 10 YCVYLLQSIPKPRTFYVGSTPDMKRRLRQHNGDLKAGGAFRTKRKGSRPWKVVTIVYNF 68
>gi|336472687|gb|EGO60847.1| hypothetical protein NEUTE1DRAFT_76361 [Neurospora tetrasperma FGSC
2508]
gi|350294077|gb|EGZ75162.1| hypothetical protein NEUTE2DRAFT_155664 [Neurospora tetrasperma
FGSC 2509]
Length = 400
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
++VY++ S Y+G+T + PRRL QHNG +GGA + + RPW C++ GF
Sbjct: 16 YTVYILRSQPRHASLYIGSTPHPPRRLSQHNGLAKGGAYRTSKISLRPWNMVCLVSGF 73
>gi|47209184|emb|CAF93873.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
VY++ TNP K Y+G T N RR+ QHN G +GGAK + PW II GF
Sbjct: 4 VYMLYCTNPKYKGRIYIGFTVNPERRVTQHNAGRHKGGAKRTSGRGPWEMLLIIHGF 60
>gi|320034113|gb|EFW16058.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGAK + + RPW ++ GF
Sbjct: 29 YCAYLLRSTVRHASLYIGSTPNPARRLAQHNGLIQGGAKRTHKVSLRPWEMVMLVSGF 86
>gi|303319669|ref|XP_003069834.1| GIY-YIG catalytic domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109520|gb|EER27689.1| GIY-YIG catalytic domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 383
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGAK + + RPW ++ GF
Sbjct: 29 YCAYLLRSTVRHASLYIGSTPNPARRLAQHNGLIQGGAKRTHKVSLRPWEMVMLVSGF 86
>gi|301628680|ref|XP_002943477.1| PREDICTED: structure-specific endonuclease subunit slx1 [Xenopus
(Silurana) tropicalis]
Length = 277
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ TNP K Y+G T N RR++QHN G+ +GGA + PW I+ GF
Sbjct: 9 YGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGF 67
>gi|383863527|ref|XP_003707232.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Megachile rotundata]
Length = 261
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNG--ELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ NP K TY+G T + RRLKQHN E RG K S G PW II GF
Sbjct: 11 YGVYLLYCMNPKYKGRTYIGYTVDPRRRLKQHNAGKEHRGAWKTSNKG-PWNMVLIIHGF 69
>gi|402081000|gb|EJT76145.1| hypothetical protein GGTG_06067 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 340
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGG-AKASQAG-RPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNG GG AK S+A RPW ++ GF
Sbjct: 21 YTVYILRSTIRRASFYIGSTPNPPRRLKQHNGHAPGGAAKTSRAKLRPWEMIGLVSGF 78
>gi|294939502|ref|XP_002782502.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894108|gb|EER14297.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 313
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGFHDQ 107
+ YL+ S P Y+G T N RR++QHNGEL GGA ++ RPW + GF Q
Sbjct: 13 YGCYLLQSEASPNVGYIGFTVNPRRRIRQHNGELNNGGAHRTKRHRPWKMLLVCYGFSSQ 72
>gi|399154213|ref|ZP_10754280.1| excinuclease ABC subunit C [gamma proteobacterium SCGC
AAA007-O20]
Length = 94
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 47 RSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+ W +Y++ + + Y G T N +RLKQH GE++GGAK +++ P
Sbjct: 7 KKWLIYILECIDDSL--YCGITNNLEKRLKQHKGEIKGGAKYTRSHLP 52
>gi|259511392|sp|B0Y2U0.1|SLX1_ASPFC RecName: Full=Structure-specific endonuclease subunit slx1
gi|159126076|gb|EDP51192.1| GIY-YIG catalytic domain containing protein [Aspergillus fumigatus
A1163]
Length = 423
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW +++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEGF 73
>gi|70984986|ref|XP_747999.1| GIY-YIG catalytic domain containing protein [Aspergillus fumigatus
Af293]
gi|74667976|sp|Q4WEL6.1|SLX1_ASPFU RecName: Full=Structure-specific endonuclease subunit slx1
gi|66845627|gb|EAL85961.1| GIY-YIG catalytic domain containing protein [Aspergillus fumigatus
Af293]
Length = 423
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW +++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEGF 73
>gi|121800891|sp|Q2UA42.1|SLX1_ASPOR RecName: Full=Structure-specific endonuclease subunit slx1
gi|83771441|dbj|BAE61573.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 406
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACIIQGFHDQ 107
+ YL+ ST Y+G+T + RRL QHNG RGGA K + RPW I++GF +
Sbjct: 16 YCCYLLRSTVRQTSLYIGSTPHPSRRLAQHNGVSRGGARKTANDKRPWEMVLIVEGFMSR 75
Query: 108 S 108
+
Sbjct: 76 T 76
>gi|317148346|ref|XP_001822706.2| structure-specific endonuclease subunit slx1 [Aspergillus oryzae
RIB40]
Length = 401
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACIIQGFHDQ 107
+ YL+ ST Y+G+T + RRL QHNG RGGA K + RPW I++GF +
Sbjct: 16 YCCYLLRSTVRQTSLYIGSTPHPSRRLAQHNGVSRGGARKTANDKRPWEMVLIVEGFMSR 75
Query: 108 S 108
+
Sbjct: 76 T 76
>gi|367037821|ref|XP_003649291.1| hypothetical protein THITE_2107775 [Thielavia terrestris NRRL 8126]
gi|346996552|gb|AEO62955.1| hypothetical protein THITE_2107775 [Thielavia terrestris NRRL 8126]
Length = 324
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRLKQHNG + GGA + + RPW ++ GF
Sbjct: 12 YTVYVLRSTVRHASLYIGSTPNPPRRLKQHNGLVPGGAARTSRSSLRPWEMVALVSGF 69
>gi|189210086|ref|XP_001941375.1| GIY-YIG catalytic domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|259511447|sp|B2WM34.1|SLX1_PYRTR RecName: Full=Structure-specific endonuclease subunit slx1
gi|187977468|gb|EDU44094.1| GIY-YIG catalytic domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 364
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-AFYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPWEMTCIVTGF 72
>gi|258571127|ref|XP_002544367.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904637|gb|EEP79038.1| predicted protein [Uncinocarpus reesii 1704]
Length = 476
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ VYL+ ST Y+G+T N +RL QHNG GGAK + + RPW I+ GF
Sbjct: 143 YCVYLLRSTVKSTSLYIGSTPNPAKRLAQHNGIKSGGAKKTHNETLRPWEMVMIVSGF 200
>gi|341894770|gb|EGT50705.1| hypothetical protein CAEBREN_02710 [Caenorhabditis brenneri]
Length = 433
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIIS-TNPPI---KTYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPWISACIIQG 103
+ VY +IS ++ P + Y+G T + RR+ QHNG +GGAK + + PW C++ G
Sbjct: 163 YGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVHG 222
Query: 104 F 104
F
Sbjct: 223 F 223
>gi|341898390|gb|EGT54325.1| hypothetical protein CAEBREN_11013 [Caenorhabditis brenneri]
Length = 431
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIIS-TNPPI---KTYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPWISACIIQG 103
+ VY +IS ++ P + Y+G T + RR+ QHNG +GGAK + + PW C++ G
Sbjct: 161 YGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVHG 220
Query: 104 F 104
F
Sbjct: 221 F 221
>gi|310831143|ref|YP_003969786.1| putative GIY-YIG endonuclease [Cafeteria roenbergensis virus
BV-PW1]
gi|309386327|gb|ADO67187.1| putative GIY-YIG endonuclease [Cafeteria roenbergensis virus
BV-PW1]
Length = 103
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGR---PWISACI 100
S+ +YL+ N +TY+G + N RR +QHNGE++GGAK++ A W CI
Sbjct: 2 SYYLYLLYHQNKN-RTYLGISNNLKRRWRQHNGEIKGGAKSTTALLSYGKWTPVCI 56
>gi|157104667|ref|XP_001648514.1| hypothetical protein AaeL_AAEL004145 [Aedes aegypti]
gi|108880287|gb|EAT44512.1| AAEL004145-PA [Aedes aegypti]
Length = 175
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 49 WSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL++S NP +TY+G T + RR+KQHN G+ GGAK + PW+ I+ G
Sbjct: 15 YGVYLLVSKSINPKFAGRTYIGYTVDPNRRIKQHNGGQDAGGAKRTSNRGPWVMVMIVHG 74
Query: 104 F 104
F
Sbjct: 75 F 75
>gi|68478257|ref|XP_716870.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|68478378|ref|XP_716810.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|46438494|gb|EAK97824.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|46438556|gb|EAK97885.1| potential DNA replication structure-specific endonuclease subunit
[Candida albicans SC5314]
gi|238882436|gb|EEQ46074.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 286
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ VY++ S P TY+G+T + RRL+QHNG+L+ GGA ++ RPW ++ GF
Sbjct: 17 YGVYILKSIPKPRSTYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWNMVVLVYGF 75
>gi|432921373|ref|XP_004080126.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Oryzias latipes]
Length = 264
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
VY++ NP K Y+G T N RR+ QHN G RGGAK + PW II GF
Sbjct: 11 VYMLYCRNPRFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEMVLIIHGF 67
>gi|119498865|ref|XP_001266190.1| GIY-YIG catalytic domain containing protein [Neosartorya fischeri
NRRL 181]
gi|259511406|sp|A1CZX3.1|SLX1_NEOFI RecName: Full=Structure-specific endonuclease subunit slx1
gi|119414354|gb|EAW24293.1| GIY-YIG catalytic domain containing protein [Neosartorya fischeri
NRRL 181]
Length = 406
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW +++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLVQHNGVVKGGARRTAAEKLRPWEMLLVVEGF 73
>gi|405966613|gb|EKC31875.1| Structure-specific endonuclease subunit slx1 [Crassostrea gigas]
Length = 292
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
VYL+ + NP K TY+G T N RR++QHN G+ GGA + PW II GF
Sbjct: 13 VYLLYNVNPQFKGRTYIGFTVNPNRRIQQHNKGKHAGGAWRTHGRGPWEMVLIIHGF 69
>gi|297826441|ref|XP_002881103.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
gi|297326942|gb|EFH57362.1| endo/excinuclease amino terminal domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ S +P K TY+G T N RR++QHNGE+ GA ++ RPW I GF
Sbjct: 28 FACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHNGEITSGAWRTKKKRPWEMVLCIYGF 85
>gi|410081618|ref|XP_003958388.1| hypothetical protein KAFR_0G02190 [Kazachstania africana CBS 2517]
gi|372464976|emb|CCF59253.1| hypothetical protein KAFR_0G02190 [Kazachstania africana CBS 2517]
Length = 300
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQ 102
S + YL+ S N Y+G+T N RRL+QHNG+L GGA ++ RPW I+
Sbjct: 5 SSFYCCYLLQSINKRQSFYIGSTPNPARRLRQHNGDLTNGGAYRTKKLGARPWEMVAIVY 64
Query: 103 GF 104
GF
Sbjct: 65 GF 66
>gi|449297757|gb|EMC93774.1| hypothetical protein BAUCODRAFT_47071, partial [Baudoinia
compniacensis UAMH 10762]
Length = 309
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
++ YL+ ST YVG+T N RRLKQHNG GGA + RPW C++ GF
Sbjct: 5 YACYLLRSTVRHQSLYVGSTPNPVRRLKQHNGIAPGGAVRTSRDTLRPWEMTCLVSGF 62
>gi|255732047|ref|XP_002550947.1| hypothetical protein CTRG_05245 [Candida tropicalis MYA-3404]
gi|240131233|gb|EER30793.1| hypothetical protein CTRG_05245 [Candida tropicalis MYA-3404]
Length = 273
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ VY++ S P TY+G+T + RRL+QHNG+L+ GGA ++ RPW ++ GF
Sbjct: 18 YGVYILQSIPKPRSTYIGSTPDPRRRLRQHNGDLKVGGAYRTKRPGCRPWKMIVLVHGF 76
>gi|358371634|dbj|GAA88241.1| GIY-YIG catalytic domain containing protein [Aspergillus kawachii
IFO 4308]
Length = 424
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNG+ +GGA+ A RPW +++GF
Sbjct: 16 YCCYLLRSTKQRTSLYIGSTPHPARRLAQHNGDSKGGARKTAKDDKRPWEMVLLVEGF 73
>gi|212702208|ref|ZP_03310336.1| hypothetical protein DESPIG_00219 [Desulfovibrio piger ATCC
29098]
gi|212674413|gb|EEB34896.1| GIY-YIG catalytic domain protein [Desulfovibrio piger ATCC 29098]
Length = 97
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
S+ +W VYL+ + + Y G TT+ RRL QHNG L GGA+ ++ RP
Sbjct: 3 SSDATWHVYLLRCADDTL--YCGVTTDLDRRLAQHNGSLPGGARYTRPRRP 51
>gi|430811517|emb|CCJ31003.1| unnamed protein product [Pneumocystis jirovecii]
Length = 342
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 63 TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW 95
TYVG+T N +RL+QHNGE+ GA + +GRPW
Sbjct: 21 TYVGSTNNPLKRLRQHNGEIASGAHKTASGRPW 53
>gi|240277646|gb|EER41154.1| GIY-YIG catalytic protein [Ajellomyces capsulatus H143]
gi|325093733|gb|EGC47043.1| GIY-YIG catalytic domain-containing protein [Ajellomyces capsulatus
H88]
Length = 421
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGFHD 106
+ YL+ ST Y+G+T RRL QHNG+ GGA+ +S+ RPW I+ GF +
Sbjct: 15 YCCYLLRSTVRHASLYIGSTPEPSRRLAQHNGDRTGGARKTSSEKLRPWEMVAIVSGFMN 74
Query: 107 QS 108
++
Sbjct: 75 RA 76
>gi|259511486|sp|Q5TXB2.3|SLX1_ANOGA RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
Length = 273
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPPIK----TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL++S +P K TY+G T + RR+KQHN GE GGA+ + PW I+ G
Sbjct: 11 YGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVHG 70
Query: 104 F 104
F
Sbjct: 71 F 71
>gi|406597587|ref|YP_006748717.1| URI domain endonuclease [Alteromonas macleodii ATCC 27126]
gi|407688530|ref|YP_006803703.1| URI domain endonuclease [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|406374908|gb|AFS38163.1| URI domain endonuclease [Alteromonas macleodii ATCC 27126]
gi|407291910|gb|AFT96222.1| URI domain endonuclease [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 115
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
S +W +YL+ N + Y G TTN RR+ QH GEL+GGAKA + P I +
Sbjct: 16 STKATWYLYLV--ENKLGQLYTGITTNPKRRIAQHRGELKGGAKALKGKAPLTFKAIFE 72
>gi|407684605|ref|YP_006799779.1| URI domain endonuclease [Alteromonas macleodii str. 'English
Channel 673']
gi|407246216|gb|AFT75402.1| URI domain endonuclease [Alteromonas macleodii str. 'English
Channel 673']
Length = 115
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
S +W +YL+ N + Y G TTN RR+ QH GEL+GGAKA + P I +
Sbjct: 16 STKATWYLYLV--ENKLGQLYTGITTNPKRRIAQHRGELKGGAKALKGKAPLTFKAIFE 72
>gi|365761944|gb|EHN03564.1| Slx1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 304
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL+QHNG+L GGA ++ RPW I+QGF
Sbjct: 14 YCCYLLQSINKRQSFYIGSTPNPIRRLRQHNGKLTVGGAYRTKRDGSRPWEMIMIVQGF 72
>gi|171693099|ref|XP_001911474.1| hypothetical protein [Podospora anserina S mat+]
gi|259511446|sp|B2B674.1|SLX1_PODAN RecName: Full=Structure-specific endonuclease subunit SLX1
gi|170946498|emb|CAP73299.1| unnamed protein product [Podospora anserina S mat+]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
+ VY++ ST Y+G+T N PRRL QHNG ++GGA + + RPW ++ GF
Sbjct: 12 YCVYILRSTVRHSSLYIGSTPNPPRRLSQHNGVVKGGAVRTSRNSLRPWEMVALVSGF 69
>gi|425772478|gb|EKV10879.1| Structure-specific endonuclease subunit slx1 [Penicillium digitatum
PHI26]
gi|425774910|gb|EKV13201.1| Structure-specific endonuclease subunit slx1 [Penicillium digitatum
Pd1]
Length = 81
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG +GGAK A RPW +++GF
Sbjct: 14 YCCYLLRSTVRHASLYIGSTPNPIRRLPQHNGVAKGGAKRTARDRLRPWEMTLVVEGF 71
>gi|401839635|gb|EJT42768.1| SLX1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 304
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL+QHNG+L GGA ++ RPW I+QGF
Sbjct: 14 YCCYLLQSINKRQSFYIGSTPNPIRRLRQHNGKLTVGGAYRTKRDGSRPWEMIMIVQGF 72
>gi|91084301|ref|XP_971859.1| PREDICTED: similar to GIY-YIG domain containing 2 [Tribolium
castaneum]
gi|270008803|gb|EFA05251.1| hypothetical protein TcasGA2_TC015403 [Tribolium castaneum]
Length = 241
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGA-KASQAGRPWISACIIQGF 104
VYL+ TNP + Y+G T + RR+KQHN G+ GGA K SQ G PW II GF
Sbjct: 5 GVYLLYCTNPKYRGRVYIGYTVDPNRRIKQHNRGKQHGGAWKTSQKG-PWSMVLIIHGF 62
>gi|307205095|gb|EFN83566.1| GIY-YIG domain-containing protein 1 [Harpegnathos saltator]
Length = 270
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 39 KRTPNSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPW 95
+ P + VYL+ NP K TY+G T + RR+KQHN G+ GGA + PW
Sbjct: 2 EEEPEVVEHFFGVYLLYCINPKYKGRTYIGYTVDPKRRIKQHNAGKKYGGAWKTSNRGPW 61
Query: 96 ISACIIQGF 104
I+ GF
Sbjct: 62 DMVLIVHGF 70
>gi|149725872|ref|XP_001496640.1| PREDICTED: structure-specific endonuclease subunit SLX1-like,
partial [Equus caballus]
Length = 274
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNP--PIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQGF 104
VYL+ NP P + YVG T N RR++QHNG + G +GR PW I+ GF
Sbjct: 15 GVYLLYCLNPRHPGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
>gi|260803485|ref|XP_002596620.1| hypothetical protein BRAFLDRAFT_219192 [Branchiostoma floridae]
gi|229281879|gb|EEN52632.1| hypothetical protein BRAFLDRAFT_219192 [Branchiostoma floridae]
Length = 155
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ NP K TY+G T + RR+KQHN G GGA+ + PW II GF
Sbjct: 9 YGVYLLYCINPKYKGRTYIGFTNDPNRRIKQHNTGTKAGGARRTSGRGPWEMVLIIHGF 67
>gi|443683296|gb|ELT87595.1| hypothetical protein CAPTEDRAFT_226573 [Capitella teleta]
Length = 283
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VY++ + NP K TY+G T + RR+KQHN G GGAK + PW I+ GF
Sbjct: 9 FGVYILYNVNPRYKGQTYIGFTVDPNRRVKQHNTGRHAGGAKRTDGRGPWEMVIIVHGF 67
>gi|321464388|gb|EFX75396.1| hypothetical protein DAPPUDRAFT_306753 [Daphnia pulex]
Length = 260
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELR-GGAKASQAGRPWISACIIQGF 104
+ VYL+ NP +TY+G T N RR++QHN +R GGA + PW II GF
Sbjct: 10 YGVYLLFCENPKYLGRTYIGYTVNPNRRIQQHNKGVRSGGAYKTSNKGPWEMCLIIHGF 68
>gi|307183277|gb|EFN70146.1| GIY-YIG domain-containing protein 1 [Camponotus floridanus]
Length = 264
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGA-KASQAGRPWISACIIQGF 104
VYL+ TNP + TY+G T + RR+KQHN G+ GGA K SQ G PW I+ GF
Sbjct: 15 VYLLYCTNPKYRGRTYIGYTVDPRRRIKQHNAGKKHGGAWKTSQKG-PWNMILIVYGF 71
>gi|380016624|ref|XP_003692278.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
isoform 2 [Apis florea]
Length = 149
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNG--ELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ S NP K Y+G T + RRLK+HN E +G K S G PW II GF
Sbjct: 11 YGVYLLYSMNPQFKGRIYIGFTVDPCRRLKEHNAGKEHKGARKTSDKG-PWNMVLIIHGF 69
>gi|380016622|ref|XP_003692277.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
isoform 1 [Apis florea]
Length = 260
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNG--ELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ S NP K Y+G T + RRLK+HN E +G K S G PW II GF
Sbjct: 11 YGVYLLYSMNPQFKGRIYIGFTVDPCRRLKEHNAGKEHKGARKTSDKG-PWNMVLIIHGF 69
Query: 105 HDQS 108
+++
Sbjct: 70 LNKT 73
>gi|261202490|ref|XP_002628459.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis SLH14081]
gi|239590556|gb|EEQ73137.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis SLH14081]
Length = 426
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNG+ GGAK + + RPW I+ GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPDPSRRLAQHNGDKTGGAKRTSREKLRPWEMVVIVSGF 73
>gi|327353238|gb|EGE82095.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis ATCC 18188]
Length = 426
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNG+ GGAK + + RPW I+ GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPDPSRRLAQHNGDKTGGAKRTSREKLRPWEMVVIVSGF 73
>gi|259511467|sp|A8WJ66.2|SLX1_CAEBR RecName: Full=Structure-specific endonuclease subunit SLX1 homolog;
AltName: Full=GIY-YIG domain-containing protein 1
Length = 439
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNP----PIKTYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPWISACIIQG 103
+ VY +IS + + Y+G T + RR+ QHNG +GGAK + + PW C++ G
Sbjct: 168 YGVYCLISRSERQCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVHG 227
Query: 104 F 104
F
Sbjct: 228 F 228
>gi|347967485|ref|XP_565552.4| AGAP002259-PA [Anopheles gambiae str. PEST]
gi|333466273|gb|EAL42010.4| AGAP002259-PA [Anopheles gambiae str. PEST]
Length = 375
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPPIK----TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL++S +P K TY+G T + RR+KQHN GE GGA+ + PW I+ G
Sbjct: 11 YGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVHG 70
Query: 104 F 104
F
Sbjct: 71 F 71
>gi|239612283|gb|EEQ89270.1| GIY-YIG catalytic domain-containing protein [Ajellomyces
dermatitidis ER-3]
Length = 426
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNG+ GGAK + + RPW I+ GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPDPSRRLAQHNGDKTGGAKRTSREKLRPWEMVVIVSGF 73
>gi|239906502|ref|YP_002953243.1| hypothetical protein DMR_18660 [Desulfovibrio magneticus RS-1]
gi|239796368|dbj|BAH75357.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 86
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
SW VY++ + + Y G T + RRL +HNG L GGAK + + RP
Sbjct: 2 SWFVYIVECCDETL--YCGITCDIARRLNEHNGTLSGGAKYTASRRP 46
>gi|259511308|sp|C0NTM8.1|SLX1_AJECG RecName: Full=Structure-specific endonuclease subunit SLX1
gi|225557102|gb|EEH05389.1| GIY-YIG catalytic domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 421
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGFHD 106
+ YL+ ST Y+G+T RRL QHNG+ GGA+ +S+ RPW I+ GF +
Sbjct: 15 YCCYLLRSTVRHASLYIGSTPEPSRRLAQHNGDRTGGARKTSSEKLRPWEMVAIVSGFTN 74
Query: 107 QS 108
++
Sbjct: 75 RA 76
>gi|296817149|ref|XP_002848911.1| GIY-YIG catalytic domain-containing protein [Arthroderma otae CBS
113480]
gi|238839364|gb|EEQ29026.1| GIY-YIG catalytic domain-containing protein [Arthroderma otae CBS
113480]
Length = 395
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA + + RPW + GF
Sbjct: 26 YCAYLLRSTVRHASLYIGSTPNPARRLAQHNGRIKGGAHRTHKEKLRPWEMVMTVSGF 83
>gi|334335449|ref|XP_003341776.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Monodelphis domestica]
Length = 270
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 36 SQSKRTPNSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAG 92
+++ R + + VYL+ NP + YVG T N RR++QHN G +GGA +
Sbjct: 4 TEASRAVKKQQQFFGVYLLYCLNPKYRGRVYVGFTVNPSRRIQQHNAGRKKGGAWRTSGR 63
Query: 93 RPWISACIIQGF 104
PW I+ GF
Sbjct: 64 GPWEMVLIVHGF 75
>gi|302679938|ref|XP_003029651.1| hypothetical protein SCHCODRAFT_59146 [Schizophyllum commune H4-8]
gi|300103341|gb|EFI94748.1| hypothetical protein SCHCODRAFT_59146 [Schizophyllum commune H4-8]
Length = 657
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPP--IKTYVGTTTNFPRRLKQ---HNGELRGGAKASQAGRPWISACIIQG 103
++ YL+ S P TY+G+T N PRR+ + + GEL GA ++ GRPWI I+ G
Sbjct: 31 YACYLLKSIKTPNSKATYIGSTPNPPRRISRSAGNAGELTQGAWKTKRGRPWIMQLIVHG 90
Query: 104 F 104
F
Sbjct: 91 F 91
>gi|322802003|gb|EFZ22540.1| hypothetical protein SINV_06653 [Solenopsis invicta]
Length = 266
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 39 KRTPNSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPW 95
+ P + VYL+ NP K TY+G T + RR+KQHN G+ GGA + PW
Sbjct: 2 EEEPEIIEHFFGVYLLYCMNPKYKGRTYIGYTVDPRRRIKQHNAGKNHGGAWQTSKRGPW 61
Query: 96 ISACIIQGF 104
I+ GF
Sbjct: 62 NMVLIVHGF 70
>gi|17507665|ref|NP_491541.1| Protein SLX-1 [Caenorhabditis elegans]
gi|74961592|sp|P91351.1|SLX1_CAEEL RecName: Full=Structure-specific endonuclease subunit SLX1 homolog;
AltName: Full=GIY-YIG domain-containing protein 1
gi|373219195|emb|CCD66429.1| Protein SLX-1 [Caenorhabditis elegans]
Length = 443
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIIS-TNPPI---KTYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPWISACIIQG 103
+ VY +IS ++ P + Y+G T + RR+ QHNG +GGAK + + PW C++ G
Sbjct: 173 YGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDMVCVVHG 232
Query: 104 F 104
F
Sbjct: 233 F 233
>gi|327280622|ref|XP_003225051.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Anolis carolinensis]
Length = 270
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ TNP + Y+G T N RR+ QHN G+ RGGA + PW I+ GF
Sbjct: 9 FGVYLLYCTNPRYHGRIYIGFTVNPERRIIQHNAGKRRGGAWKTSGRGPWDMVLIVHGF 67
>gi|367024945|ref|XP_003661757.1| hypothetical protein MYCTH_2301552 [Myceliophthora thermophila ATCC
42464]
gi|347009025|gb|AEO56512.1| hypothetical protein MYCTH_2301552 [Myceliophthora thermophila ATCC
42464]
Length = 319
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
++VY++ ST Y+G+T N PRRL QHNG + GGA + + RPW ++ GF
Sbjct: 12 YTVYVLRSTVRHASFYIGSTPNPPRRLSQHNGLVPGGAARTSRKDLRPWEMVALVSGF 69
>gi|156836521|ref|XP_001642318.1| hypothetical protein Kpol_223p3 [Vanderwaltozyma polyspora DSM
70294]
gi|259511450|sp|A7TTE6.1|SLX1_VANPO RecName: Full=Structure-specific endonuclease subunit SLX1
gi|156112818|gb|EDO14460.1| hypothetical protein Kpol_223p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 319
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL+QHNG L GGA + + RPW ++ GF
Sbjct: 22 YCCYLLQSINKKQSFYIGSTPNPVRRLRQHNGNLSNGGAYRTKREGTRPWEMVLVVYGF 80
>gi|30089945|ref|NP_835145.1| structure-specific endonuclease subunit SLX1 isoform 2 [Homo
sapiens]
gi|62868210|ref|NP_001015000.1| structure-specific endonuclease subunit SLX1 isoform 2 [Homo
sapiens]
gi|46362525|gb|AAH69007.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|120660084|gb|AAI30546.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|120660418|gb|AAI30548.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|146327230|gb|AAI41498.1| GIY-YIG domain containing 1 [synthetic construct]
gi|151555605|gb|AAI48778.1| GIY-YIG domain containing 1 [synthetic construct]
gi|208966368|dbj|BAG73198.1| GIY-YIG domain containing 2 [synthetic construct]
gi|219518283|gb|AAI44463.1| GIY-YIG domain containing 1 [Homo sapiens]
gi|313882702|gb|ADR82837.1| GIY-YIG domain containing 1 (GIYD1), transcript variant 2
[synthetic construct]
Length = 161
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|398365607|ref|NP_009787.3| Slx1p [Saccharomyces cerevisiae S288c]
gi|586345|sp|P38324.1|SLX1_YEAST RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=Synthetic lethal of unknown function
protein 1
gi|536624|emb|CAA85191.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810558|tpg|DAA07343.1| TPA: Slx1p [Saccharomyces cerevisiae S288c]
Length = 304
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|332140887|ref|YP_004426625.1| URI domain endonuclease [Alteromonas macleodii str. 'Deep ecotype']
gi|327550909|gb|AEA97627.1| hypothetical URI domain endonuclease [Alteromonas macleodii str.
'Deep ecotype']
Length = 118
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
W +YLI N + Y G TT RR+ QH GEL+GGAKA + P + + +
Sbjct: 24 WYLYLI--ENKLGQLYTGITTEPKRRIAQHRGELKGGAKALKGKSPLVFRAVFE 75
>gi|259511451|sp|B3LMT5.1|SLX1_YEAS1 RecName: Full=Structure-specific endonuclease subunit SLX1
gi|259511452|sp|B5VEH8.1|SLX1_YEAS6 RecName: Full=Structure-specific endonuclease subunit SLX1
gi|190408623|gb|EDV11888.1| hypothetical protein SCRG_02743 [Saccharomyces cerevisiae RM11-1a]
gi|207347525|gb|EDZ73665.1| YBR228Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272880|gb|EEU07848.1| Slx1p [Saccharomyces cerevisiae JAY291]
gi|323334655|gb|EGA76029.1| Slx1p [Saccharomyces cerevisiae AWRI796]
gi|365766928|gb|EHN08417.1| Slx1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301075|gb|EIW12164.1| Slx1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 304
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|410862454|ref|YP_006977688.1| URI domain endonuclease [Alteromonas macleodii AltDE1]
gi|410819716|gb|AFV86333.1| URI domain endonuclease [Alteromonas macleodii AltDE1]
Length = 115
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
W +YLI N + Y G TT RR+ QH GEL+GGAKA + P + + +
Sbjct: 21 WYLYLI--ENKLGQLYTGITTEPKRRIAQHRGELKGGAKALKGKSPLVFRAVFE 72
>gi|259511453|sp|A6ZLG6.1|SLX1_YEAS7 RecName: Full=Structure-specific endonuclease subunit SLX1
gi|151946613|gb|EDN64835.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|349576602|dbj|GAA21773.1| K7_Slx1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 304
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|323356156|gb|EGA87961.1| Slx1p [Saccharomyces cerevisiae VL3]
Length = 304
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|344294531|ref|XP_003418970.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Loxodonta africana]
Length = 270
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG R G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRRKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|426381835|ref|XP_004057538.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 2 [Gorilla gorilla gorilla]
Length = 240
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 90 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 149
Query: 103 GF 104
GF
Sbjct: 150 GF 151
>gi|410209508|gb|JAA01973.1| SLX1 structure-specific endonuclease subunit homolog A [Pan
troglodytes]
Length = 240
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 90 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 149
Query: 103 GF 104
GF
Sbjct: 150 GF 151
>gi|397475972|ref|XP_003809386.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Pan
paniscus]
gi|410292034|gb|JAA24617.1| GIY-YIG domain containing 2 [Pan troglodytes]
Length = 275
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|13129004|ref|NP_076949.1| structure-specific endonuclease subunit SLX1 isoform 1 [Homo
sapiens]
gi|62868208|ref|NP_001014999.1| structure-specific endonuclease subunit SLX1 isoform 1 [Homo
sapiens]
gi|74732820|sp|Q9BQ83.1|SLX1_HUMAN RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|12653921|gb|AAH00754.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|12654007|gb|AAH00803.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|16359045|gb|AAH15990.1| GIY-YIG domain containing 2 [Homo sapiens]
gi|17939502|gb|AAH19306.1| GIY-YIG domain containing 2 [Homo sapiens]
Length = 275
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|259511465|sp|B4I3R2.2|SLX1_DROSE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
Length = 298
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 28 SPTPIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GEL 82
S P + SQ + T + VYL+ S +P K YVG T N RR++QHN G
Sbjct: 3 SYDPQDTGSQQEETVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCD 62
Query: 83 RGGAKASQAGRPWISACIIQGF 104
GGA+ + PW+ I+ GF
Sbjct: 63 FGGARKTSRKGPWLMVMIVHGF 84
>gi|410173183|ref|XP_003960690.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 3 [Homo sapiens]
Length = 240
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 90 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 149
Query: 103 GF 104
GF
Sbjct: 150 GF 151
>gi|346472947|gb|AEO36318.1| hypothetical protein [Amblyomma maculatum]
Length = 250
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELR-GGAKASQAGRPWISACIIQGF 104
+ YL+ TNP K TY+G T + RR+KQHN + GGA + PW A I+ GF
Sbjct: 7 YGCYLLYCTNPKYKGHTYIGFTVDPNRRIKQHNKGFKAGGAWRTSRKGPWDMALIVHGF 65
>gi|387129768|ref|YP_006292658.1| excinuclease ABC subunit C [Methylophaga sp. JAM7]
gi|386271057|gb|AFJ01971.1| Excinuclease ABC, C subunit [Methylophaga sp. JAM7]
Length = 89
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK 87
W++Y++ + + + Y G TT+ RRLKQH EL GGAK
Sbjct: 5 DWTLYIVSTEDGAL--YTGITTDLARRLKQHRQELAGGAK 42
>gi|195343465|ref|XP_002038318.1| GM10768 [Drosophila sechellia]
gi|194133339|gb|EDW54855.1| GM10768 [Drosophila sechellia]
Length = 308
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 31 PIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GELRGG 85
P + SQ + T + VYL+ S +P K YVG T N RR++QHN G GG
Sbjct: 16 PQDTGSQQEETVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGG 75
Query: 86 AKASQAGRPWISACIIQGF 104
A+ + PW+ I+ GF
Sbjct: 76 ARKTSRKGPWLMVMIVHGF 94
>gi|401626758|gb|EJS44680.1| slx1p [Saccharomyces arboricola H-6]
Length = 304
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYIGSTPNPVRRLRQHNGKLTVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|50292185|ref|XP_448525.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608975|sp|Q6FML9.1|SLX1_CANGA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|49527837|emb|CAG61486.1| unnamed protein product [Candida glabrata]
Length = 312
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQGF 104
+ YL+ S + Y+G+T N RRL+QHNG L RGGA ++ RPW I+ GF
Sbjct: 11 YGCYLLQSISKRQSFYIGSTPNPVRRLRQHNGSLSRGGAYRTKRDGTRPWEMVAIVYGF 69
>gi|195568245|ref|XP_002102128.1| GD17776 [Drosophila simulans]
gi|194198055|gb|EDX11631.1| GD17776 [Drosophila simulans]
Length = 183
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 31 PIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GELRGG 85
P + SQ + T + VYL+ S +P K YVG T N RR++QHN G GG
Sbjct: 16 PQDTGSQQEETVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCDFGG 75
Query: 86 AKASQAGRPWISACIIQGF 104
A+ + PW+ I+ GF
Sbjct: 76 ARKTSRKGPWLMVMIVHGF 94
>gi|402583674|gb|EJW77618.1| hypothetical protein WUBG_11472, partial [Wuchereria bancrofti]
Length = 287
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 62 KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ Y+G T N RR++QHN G+ GGAK + PW CII GF
Sbjct: 41 RCYIGYTVNPNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIHGF 84
>gi|332026295|gb|EGI66431.1| Structure-specific endonuclease subunit slx1 [Acromyrmex
echinatior]
Length = 269
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 51 VYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
VYL+ NP K TY+G T + RR+KQHN G+ GGA + PW I+ GF
Sbjct: 15 VYLLYCMNPKYKGRTYIGYTVDPRRRIKQHNAGKKHGGAWKTSNRGPWNMILIVHGF 71
>gi|385302586|gb|EIF46711.1| putative dna replication structure-specific endonuclease subunit
[Dekkera bruxellensis AWRI1499]
Length = 310
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQGF 104
+ VYL+ S Y+G+T + RRL+QHNGEL RGGA + RPW + GF
Sbjct: 5 YGVYLLRSLRKKNSFYIGSTPDPYRRLRQHNGELTRGGAYRTXRNGFRPWKMVLFVYGF 63
>gi|195389759|ref|XP_002053541.1| GJ23950 [Drosophila virilis]
gi|194151627|gb|EDW67061.1| GJ23950 [Drosophila virilis]
Length = 303
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPPI----KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL+ S +P K YVG T N RR+KQHN G GGA+ + PW I+ G
Sbjct: 14 YGVYLLCSQSPDARYRGKCYVGFTVNPKRRIKQHNRGCDFGGARKTSKKGPWQMVLIVHG 73
Query: 104 F 104
F
Sbjct: 74 F 74
>gi|410984910|ref|XP_003998768.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 1
[Felis catus]
Length = 274
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW I+
Sbjct: 11 GRFFGVYLLYCLNPRHRGRVYVGFTVNPTRRVQQHNGGRKKGGAWRTSGRGPWAMVLIVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|403218437|emb|CCK72927.1| hypothetical protein KNAG_0M00740 [Kazachstania naganishii CBS
8797]
Length = 291
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N +RL+QHNG L GGA ++ RPW I+ GF
Sbjct: 8 YCCYLLQSVNKRQSFYVGSTPNPYKRLRQHNGSLVHGGAYRTKRLGARPWEMVGIVYGF 66
>gi|397639742|gb|EJK73734.1| hypothetical protein THAOC_04628 [Thalassiosira oceanica]
Length = 836
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 42 PNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISA 98
P S++ VYL++ST + YVGTT N RRL QHN A RPW A
Sbjct: 705 PLPQSKTGYVYLLVSTVDMNRCYVGTTANVARRLNQHNSGHGADETAPIQYRPWFVA 761
>gi|441676204|ref|XP_003282667.2| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 2 [Nomascus leucogenys]
Length = 240
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 90 GRFFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 149
Query: 103 GF 104
GF
Sbjct: 150 GF 151
>gi|371944822|gb|AEX62643.1| uncharacterized endo_excinuclease aminoterminal domain protein
[Moumouvirus Monve]
Length = 163
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 63 TYVGTTTNFPRRLKQHNGE----LRGGAKASQAGRPWISACIIQGFHDQ 107
TY+G+T N P+RL HN +R GAK ++A + W+ II GFHD+
Sbjct: 8 TYIGSTNNQPKRLNAHNNNNPDIVRKGAKRTRA-QTWVPVIIISGFHDK 55
>gi|330916233|ref|XP_003297344.1| hypothetical protein PTT_07708 [Pyrenophora teres f. teres 0-1]
gi|311330038|gb|EFQ94562.1| hypothetical protein PTT_07708 [Pyrenophora teres f. teres 0-1]
Length = 367
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 64 YVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
Y+G+T + RRL QHNG GGAK + Q RPW CI+ GF
Sbjct: 30 YIGSTPSPARRLGQHNGSSTGGAKRTSMQGKRPWEMTCIVTGF 72
>gi|12852787|dbj|BAB29533.1| unnamed protein product [Mus musculus]
gi|148685468|gb|EDL17415.1| GIY-YIG domain containing 2, isoform CRA_e [Mus musculus]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW II
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|444725832|gb|ELW66386.1| Structure-specific endonuclease subunit SLX1 [Tupaia chinensis]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW I+
Sbjct: 11 GRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|380791843|gb|AFE67797.1| structure-specific endonuclease subunit SLX1 isoform 1, partial
[Macaca mulatta]
Length = 142
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|426197342|gb|EKV47269.1| hypothetical protein AGABI2DRAFT_117837 [Agaricus bisporus var.
bisporus H97]
Length = 700
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 49 WSVYLI--ISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ + T K Y+G T RL+QHNG GGA+ + RPW ++ GF
Sbjct: 13 YACYLLKSLRTARSYKNYIGVTYKPMYRLQQHNGNRPGGARGTALHRPWAMQLLVHGF 70
>gi|402908127|ref|XP_003916806.1| PREDICTED: structure-specific endonuclease subunit SLX1-like [Papio
anubis]
Length = 275
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|221483527|gb|EEE21846.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 860
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGFHDQ 107
VYL+ S P TYVG + + RLKQHNGE GGA +Q RPW ++ GF Q
Sbjct: 76 VYLLRSLKNPRYTYVGYSVHPLNRLKQHNGETSHGGAWKTQRHRPWALVLVLHGFPTQ 133
>gi|237845043|ref|XP_002371819.1| hypothetical protein TGME49_012170 [Toxoplasma gondii ME49]
gi|211969483|gb|EEB04679.1| hypothetical protein TGME49_012170 [Toxoplasma gondii ME49]
Length = 860
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGFHDQ 107
VYL+ S P TYVG + + RLKQHNGE GGA +Q RPW ++ GF Q
Sbjct: 76 VYLLRSLKNPRYTYVGYSVHPLNRLKQHNGETSHGGAWKTQRHRPWALVLVLHGFPTQ 133
>gi|410984912|ref|XP_003998769.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 2
[Felis catus]
Length = 161
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW I+
Sbjct: 11 GRFFGVYLLYCLNPRHRGRVYVGFTVNPTRRVQQHNGGRKKGGAWRTSGRGPWAMVLIVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|221508000|gb|EEE33587.1| GIY-YIG catalytic domain-containing protein [Toxoplasma gondii VEG]
Length = 860
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGFHDQ 107
VYL+ S P TYVG + + RLKQHNGE GGA +Q RPW ++ GF Q
Sbjct: 76 VYLLRSLKNPRYTYVGYSVHPLNRLKQHNGETSHGGAWKTQRHRPWALVLVLHGFPTQ 133
>gi|302565140|ref|NP_001181378.1| structure-specific endonuclease subunit SLX1 [Macaca mulatta]
gi|383408567|gb|AFH27497.1| structure-specific endonuclease subunit SLX1 isoform 1 [Macaca
mulatta]
gi|387540494|gb|AFJ70874.1| structure-specific endonuclease subunit SLX1 isoform 1 [Macaca
mulatta]
Length = 275
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|303327254|ref|ZP_07357696.1| GIY-YIG catalytic domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345891112|ref|ZP_08841969.1| hypothetical protein HMPREF1022_00629 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863242|gb|EFL86174.1| GIY-YIG catalytic domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345048537|gb|EGW52364.1| hypothetical protein HMPREF1022_00629 [Desulfovibrio sp.
6_1_46AFAA]
Length = 106
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 32 IRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQA 91
IR ++ RT + + W VYL+ + + Y G TT+ RRL QHNG GGA+ +
Sbjct: 5 IRVSARPARTGGAAT-HWHVYLLECADGTL--YCGVTTDLARRLAQHNGLAPGGARYTSG 61
Query: 92 GRP 94
RP
Sbjct: 62 RRP 64
>gi|301783965|ref|XP_002927409.1| PREDICTED: LOW QUALITY PROTEIN: structure-specific endonuclease
subunit SLX1-like [Ailuropoda melanoleuca]
Length = 270
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW I+ G
Sbjct: 12 RFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHG 71
Query: 104 F 104
F
Sbjct: 72 F 72
>gi|115646308|gb|ABJ17012.1| IP09950p [Drosophila melanogaster]
Length = 304
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 19 PSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRR 74
PS + +S P + SQ + + + VYL+ S +P K YVG T N RR
Sbjct: 3 PSTIQMNSYDPQD--TASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRR 60
Query: 75 LKQHN-GELRGGAKASQAGRPWISACIIQGF 104
++QHN G GGA+ + PW+ I+ GF
Sbjct: 61 IRQHNLGCDFGGARKTSRKGPWLMVMIVHGF 91
>gi|311977682|ref|YP_003986802.1| uncharacterized endo/excinuclease amino terminal domain protein
[Acanthamoeba polyphaga mimivirus]
gi|82000019|sp|Q5UPY6.1|YL300_MIMIV RecName: Full=Uncharacterized protein L300
gi|55416922|gb|AAV50572.1| endo/excinuclease amino terminal domain protein [Acanthamoeba
polyphaga mimivirus]
gi|308204325|gb|ADO18126.1| uncharacterized endo/excinuclease amino terminal domain protein
[Acanthamoeba polyphaga mimivirus]
gi|339061236|gb|AEJ34540.1| endo/excinuclease amino terminal domain protein [Acanthamoeba
polyphaga mimivirus]
gi|351737453|gb|AEQ60488.1| GIY-YIG nuclease superfamily protein [Acanthamoeba castellanii
mamavirus]
gi|398257143|gb|EJN40751.1| endo/excinuclease amino terminal domain protein [Acanthamoeba
polyphaga lentillevirus]
Length = 166
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGE--LRGGAKASQAGRPWISACIIQGFH 105
+W YLI+S + +TY+G+T N RRL HN R GAK ++ GR WI I GF
Sbjct: 3 NWVCYLIMSLDSK-ETYIGSTNNRQRRLNDHNNLNPSRKGAKRTR-GRTWIPILYISGFE 60
Query: 106 DQS 108
+++
Sbjct: 61 NKN 63
>gi|148685465|gb|EDL17412.1| GIY-YIG domain containing 2, isoform CRA_b [Mus musculus]
Length = 233
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW II
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|50310997|ref|XP_455521.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605245|sp|Q6CKL8.1|SLX1_KLULA RecName: Full=Structure-specific endonuclease subunit SLX1
gi|49644657|emb|CAG98229.1| KLLA0F09713p [Kluyveromyces lactis]
Length = 288
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQGF 104
+ YL+ S P Y+G++ + RRL+QHNG + RGGA ++ RPW C I GF
Sbjct: 12 YCSYLLRSIPKPNSFYIGSSPDPVRRLRQHNGAVRRGGAYRTKRNGTRPWKMVCFIYGF 70
>gi|409080442|gb|EKM80802.1| hypothetical protein AGABI1DRAFT_126840 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 722
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 49 WSVYLI--ISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ YL+ + T K Y+G T RL+QHNG GGA+ + RPW ++ GF
Sbjct: 13 YACYLLKSLRTARSYKNYIGVTYKPMYRLQQHNGNRPGGARGTALHRPWAMQLLVHGF 70
>gi|62543493|ref|NP_083696.2| structure-specific endonuclease subunit SLX1 [Mus musculus]
gi|81897891|sp|Q8BX32.1|SLX1_MOUSE RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|26339806|dbj|BAC33566.1| unnamed protein product [Mus musculus]
gi|148685466|gb|EDL17413.1| GIY-YIG domain containing 2, isoform CRA_c [Mus musculus]
gi|148877973|gb|AAI45689.1| GIY-YIG domain containing 2 [Mus musculus]
Length = 270
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW II
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|253742353|gb|EES99189.1| Hypothetical protein GL50581_3572 [Giardia intestinalis ATCC 50581]
Length = 356
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNP--PIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y +++ +P P + Y+G T N RR++QHN ++ GGA+ + PW + GF
Sbjct: 11 FACYCLVTESPELPKRCYIGFTNNPLRRIRQHNRKIAGGARKTSRYGPWKMVLFVGGF 68
>gi|440635916|gb|ELR05835.1| hypothetical protein GMDG_07608 [Geomyces destructans 20631-21]
Length = 329
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
++VYL+ S P Y+G+T RRL+QHNG + GGA A + RPW ++ GF
Sbjct: 10 YTVYLLRSLPLPSSLYIGSTPLPSRRLRQHNGVVVGGASRTARASHRPWEMPVLVVGF 67
>gi|281360057|ref|NP_649484.3| nuclease slx1 [Drosophila melanogaster]
gi|259511488|sp|Q9VN41.3|SLX1_DROME RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|272476806|gb|AAF52110.3| nuclease slx1 [Drosophila melanogaster]
Length = 297
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 28 SPTPIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GEL 82
S P + SQ + + + VYL+ S +P K YVG T N RR++QHN G
Sbjct: 3 SYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCD 62
Query: 83 RGGAKASQAGRPWISACIIQGF 104
GGA+ + PW+ I+ GF
Sbjct: 63 FGGARKTSRKGPWLMVMIVHGF 84
>gi|259511466|sp|B3P230.2|SLX1_DROER RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
Length = 294
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 34 SQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKA 88
+ Q + T + VYL+ S +P K YVG T N RR++QHN G GGA+
Sbjct: 10 ASEQQEETVALKGHFYGVYLLCSQSLDPRFRGKCYVGFTVNPKRRIRQHNLGCDFGGARK 69
Query: 89 SQAGRPWISACIIQGF 104
+ PW+ I+ GF
Sbjct: 70 TSRRGPWLMVMIVHGF 85
>gi|348584264|ref|XP_003477892.1| PREDICTED: structure-specific endonuclease subunit SLX1-like [Cavia
porcellus]
Length = 266
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPP--IKTYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRNRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|351708909|gb|EHB11828.1| Structure-specific endonuclease subunit SLX1, partial
[Heterocephalus glaber]
Length = 221
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLLVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|194898576|ref|XP_001978845.1| GG12527 [Drosophila erecta]
gi|190650548|gb|EDV47803.1| GG12527 [Drosophila erecta]
Length = 304
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 34 SQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKA 88
+ Q + T + VYL+ S +P K YVG T N RR++QHN G GGA+
Sbjct: 20 ASEQQEETVALKGHFYGVYLLCSQSLDPRFRGKCYVGFTVNPKRRIRQHNLGCDFGGARK 79
Query: 89 SQAGRPWISACIIQGF 104
+ PW+ I+ GF
Sbjct: 80 TSRRGPWLMVMIVHGF 95
>gi|195107184|ref|XP_001998196.1| GI23768 [Drosophila mojavensis]
gi|259511398|sp|B4KBJ0.1|SLX1_DROMO RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|193914790|gb|EDW13657.1| GI23768 [Drosophila mojavensis]
Length = 303
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPPI----KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL+ S + + K YVG T N RR++QHN G GGAK + PW I+ G
Sbjct: 22 YGVYLLCSQSVDVRHRGKCYVGFTVNPKRRIRQHNRGSSFGGAKKTSKKGPWQMVMIVHG 81
Query: 104 F 104
F
Sbjct: 82 F 82
>gi|220904873|ref|YP_002480185.1| excinuclease ABC C subunit domain-containing protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219869172|gb|ACL49507.1| Excinuclease ABC C subunit domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 91
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W VYL+ + + Y G T + RRL QHNG + GGA+ ++ RP
Sbjct: 6 WLVYLLECADGTL--YCGITRHMERRLAQHNGTISGGARYTRGRRP 49
>gi|238018514|ref|ZP_04598940.1| hypothetical protein VEIDISOL_00341 [Veillonella dispar ATCC 17748]
gi|237864985|gb|EEP66275.1| hypothetical protein VEIDISOL_00341 [Veillonella dispar ATCC 17748]
Length = 97
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 35 QSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
Q + + S R + VYL+ + + Y G TT+ RR++ HNG + GGAK ++ RP
Sbjct: 3 QKMANKEVKSEERHY-VYLVRCADDSL--YCGWTTDIERRIEAHNGLIPGGAKYTRGRRP 59
Query: 95 WISACIIQGFHDQSD 109
+ + FH++ D
Sbjct: 60 -VELVYSESFHNKQD 73
>gi|354496115|ref|XP_003510173.1| PREDICTED: structure-specific endonuclease subunit SLX1-like,
partial [Cricetulus griseus]
Length = 77
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW I+
Sbjct: 8 ERFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|395515911|ref|XP_003762141.1| PREDICTED: structure-specific endonuclease subunit SLX1
[Sarcophilus harrisii]
Length = 165
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ NP + YVG T N RR++QHN G +GGA + PW I+ GF
Sbjct: 17 FGVYLLYCLNPKYRGRVYVGFTVNPSRRVQQHNAGRKKGGAWRTSGRGPWEMVLIVHGF 75
>gi|254483257|ref|ZP_05096489.1| putative GIY-YIG catalytic domain protein [marine gamma
proteobacterium HTCC2148]
gi|214036480|gb|EEB77155.1| putative GIY-YIG catalytic domain protein [marine gamma
proteobacterium HTCC2148]
Length = 97
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWIS 97
WSVY++ + + Y G + RRL+QHNGE+ GG K + RP +
Sbjct: 17 WSVYILECADGTL--YTGIARDLARRLRQHNGEIAGGPKYTSGRRPVVE 63
>gi|403273971|ref|XP_003928768.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Saimiri boliviensis boliviensis]
gi|403277027|ref|XP_003930180.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Saimiri
boliviensis boliviensis]
Length = 275
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 12 RFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71
Query: 104 F 104
F
Sbjct: 72 F 72
>gi|431906801|gb|ELK10922.1| Structure-specific endonuclease subunit SLX1 [Pteropus alecto]
Length = 270
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPP--IKTYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW I+
Sbjct: 11 GRFFGVYLLYCLNPRNRGRVYVGFTVNPTRRVQQHNGGRKKGGAWRTSGRGPWEMVLIVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|73958514|ref|XP_849594.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 1
[Canis lupus familiaris]
Length = 272
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQGF 104
VYL+ NP + YVG T N RR++QHNG + G +GR PW I+ GF
Sbjct: 15 GVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
>gi|291231787|ref|XP_002735844.1| PREDICTED: GIY-YIG domain-containing protein, putative-like
[Saccoglossus kowalevskii]
Length = 274
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
+ + YL+ TNP K TY+G T + RR+ QHN G GGA + PW II
Sbjct: 6 EKFFGCYLLYCTNPKYKGRTYIGYTVDPRRRITQHNKGSKFGGACRTSGKGPWEMVLIIH 65
Query: 103 GF 104
GF
Sbjct: 66 GF 67
>gi|149067865|gb|EDM17417.1| GIY-YIG domain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 233
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW I+
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|344253754|gb|EGW09858.1| Structure-specific endonuclease subunit SLX1 [Cricetulus griseus]
Length = 93
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW I+
Sbjct: 8 ERFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|407700882|ref|YP_006825669.1| URI domain endonuclease [Alteromonas macleodii str. 'Black Sea
11']
gi|407250029|gb|AFT79214.1| URI domain endonuclease [Alteromonas macleodii str. 'Black Sea
11']
Length = 115
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W +YL+ N Y G TT+ RR+ QH GEL+GGAKA + P
Sbjct: 21 WYLYLV--ENKLGHIYTGITTDPKRRIAQHRGELKGGAKALKGKAP 64
>gi|296219888|ref|XP_002756076.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Callithrix
jacchus]
Length = 274
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 12 RFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71
Query: 104 F 104
F
Sbjct: 72 F 72
>gi|57164135|ref|NP_001009292.1| structure-specific endonuclease subunit SLX1 [Rattus norvegicus]
gi|81883250|sp|Q5PQP5.1|SLX1_RAT RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|56268881|gb|AAH87090.1| GIY-YIG domain containing 2 [Rattus norvegicus]
gi|149067867|gb|EDM17419.1| GIY-YIG domain containing 2, isoform CRA_d [Rattus norvegicus]
Length = 271
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW I+
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|290878245|emb|CBK39304.1| Slx1p [Saccharomyces cerevisiae EC1118]
Length = 304
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S + YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSISKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|82697331|ref|NP_001032533.1| structure-specific endonuclease subunit SLX1 [Bos taurus]
gi|122138885|sp|Q32PI0.1|SLX1_BOVIN RecName: Full=Structure-specific endonuclease subunit SLX1;
AltName: Full=GIY-YIG domain-containing protein 1
gi|79153460|gb|AAI08109.1| GIY-YIG domain containing [Bos taurus]
gi|296473263|tpg|DAA15378.1| TPA: structure-specific endonuclease subunit SLX1 [Bos taurus]
Length = 267
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQGF 104
VYL+ NP + YVG T N RR++QHNG + G +GR PW I+ GF
Sbjct: 8 GVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 65
>gi|154313021|ref|XP_001555837.1| hypothetical protein BC1G_05512 [Botryotinia fuckeliana B05.10]
Length = 391
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 73 RRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
RRL+QHNG ++GGA + G RPW ACI+ GF
Sbjct: 6 RRLRQHNGLVKGGAVRTSRGNLRPWEMACIVTGF 39
>gi|149067866|gb|EDM17418.1| GIY-YIG domain containing 2, isoform CRA_c [Rattus norvegicus]
Length = 280
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW I+
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>gi|45184997|ref|NP_982715.1| AAR172Wp [Ashbya gossypii ATCC 10895]
gi|74695655|sp|Q75EA5.1|SLX1_ASHGO RecName: Full=Structure-specific endonuclease subunit SLX1
gi|44980618|gb|AAS50539.1| AAR172Wp [Ashbya gossypii ATCC 10895]
gi|374105915|gb|AEY94826.1| FAAR172Wp [Ashbya gossypii FDAG1]
Length = 301
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S + Y+G+T N RRL+QHNG L +GGA + Q RPW A + GF
Sbjct: 14 YCCYLLRSIPKRLSYYIGSTPNPVRRLRQHNGLLTKGGAYRTKRQGTRPWELAASVSGF 72
>gi|401410146|ref|XP_003884521.1| hypothetical protein NCLIV_049200 [Neospora caninum Liverpool]
gi|325118939|emb|CBZ54491.1| hypothetical protein NCLIV_049200 [Neospora caninum Liverpool]
Length = 765
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGFHDQ 107
VYL+ S P TYVG + + RLKQHNGE GGA +Q RPW ++ GF Q
Sbjct: 89 VYLLRSLKNPRYTYVGYSVHPLNRLKQHNGETAHGGAWKTQRHRPWSLVLVVHGFPTQ 146
>gi|212709925|ref|ZP_03318053.1| hypothetical protein PROVALCAL_00975 [Providencia alcalifaciens
DSM 30120]
gi|212687437|gb|EEB46965.1| hypothetical protein PROVALCAL_00975 [Providencia alcalifaciens
DSM 30120]
Length = 131
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 46 SRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
SR+WS+YLI N + Y G TT+ PRR KQH + GAKA + P
Sbjct: 32 SRNWSLYLIRQKNNAL--YCGITTDVPRRFKQHESGI--GAKALKGKAP 76
>gi|324504748|gb|ADY42047.1| Structure-specific endonuclease subunit SLX1 [Ascaris suum]
Length = 433
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 49 WSVYLIIS--TNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VY +IS N K Y+G T + RR++QHN G+ GGA + PW CII G
Sbjct: 166 YGVYCLISRSANKYFKNRCYIGYTVDPNRRIRQHNAGKQFGGAGRTDHRGPWDMVCIIHG 225
Query: 104 F 104
F
Sbjct: 226 F 226
>gi|323338738|gb|EGA79954.1| Slx1p [Saccharomyces cerevisiae Vin13]
Length = 304
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSIXKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>gi|317484489|ref|ZP_07943399.1| GIY-YIG catalytic domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316924265|gb|EFV45441.1| GIY-YIG catalytic domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 89
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACII 101
W VYL+ + + Y G TT+ RRL++HN R GAK ++A RP C +
Sbjct: 2 WYVYLLRCADATL--YCGVTTDMERRLREHNAGSR-GAKYTRARRPVELVCCV 51
>gi|308461163|ref|XP_003092877.1| CRE-SLX-1 protein [Caenorhabditis remanei]
gi|308252127|gb|EFO96079.1| CRE-SLX-1 protein [Caenorhabditis remanei]
Length = 416
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 30 TPIRSQSQSKRTPNSNSRSWSVYLIIS-TNPPI---KTYVGTTTNFPRRLKQHNG-ELRG 84
+P + + + K T N + VY +IS ++ P + Y+G T + RR+ QHNG +G
Sbjct: 136 SPEKKKRKEKITEVQN-EFYGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKG 194
Query: 85 GAKASQAGRPWISACIIQGF 104
GAK + + PW C++ GF
Sbjct: 195 GAKKTDSRGPWDMVCVVHGF 214
>gi|345888355|ref|ZP_08839449.1| hypothetical protein HMPREF0178_02223 [Bilophila sp. 4_1_30]
gi|345040807|gb|EGW45032.1| hypothetical protein HMPREF0178_02223 [Bilophila sp. 4_1_30]
Length = 89
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACII 101
W VYL+ + + Y G TT+ RRL++HN R GAK ++A RP C +
Sbjct: 2 WYVYLLRCADATL--YCGVTTDMERRLREHNAG-RRGAKYTRARRPVELVCCV 51
>gi|198453592|ref|XP_002137705.1| GA27368 [Drosophila pseudoobscura pseudoobscura]
gi|259511400|sp|B5DXG8.1|SLX1_DROPS RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|198132426|gb|EDY68263.1| GA27368 [Drosophila pseudoobscura pseudoobscura]
Length = 291
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPP----IKTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL+ S + K YVG T N RR+KQHN G GGAK + PW I+ G
Sbjct: 17 YGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKKGPWQMVMIVHG 76
Query: 104 F 104
F
Sbjct: 77 F 77
>gi|422019174|ref|ZP_16365724.1| hypothetical protein OO9_10751 [Providencia alcalifaciens Dmel2]
gi|414103716|gb|EKT65290.1| hypothetical protein OO9_10751 [Providencia alcalifaciens Dmel2]
Length = 102
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 46 SRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
SR+WS+YLI N + Y G TT+ PRR KQH + GAKA + P
Sbjct: 3 SRNWSLYLIRQKNNAL--YCGITTDVPRRFKQHESGI--GAKALKGKAP 47
>gi|367005416|ref|XP_003687440.1| hypothetical protein TPHA_0J01850 [Tetrapisispora phaffii CBS 4417]
gi|357525744|emb|CCE65006.1| hypothetical protein TPHA_0J01850 [Tetrapisispora phaffii CBS 4417]
Length = 313
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 26 SSSPTP-----IRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNG 80
S SP+P + SQ++ + P + YL+ S Y+G+T + RRL+QHNG
Sbjct: 2 SQSPSPSDDQIVSSQTRKRTYPTL----YCCYLLQSIAKRRSFYIGSTPHPVRRLRQHNG 57
Query: 81 EL-RGGAKASQ--AGRPWISACIIQGF 104
L RGGA ++ RPW ++ GF
Sbjct: 58 ILSRGGAYRTKRDGTRPWEMIVVVYGF 84
>gi|410209510|gb|JAA01974.1| GIY-YIG domain containing 2 [Pan troglodytes]
gi|410255032|gb|JAA15483.1| GIY-YIG domain containing 2 [Pan troglodytes]
gi|410329011|gb|JAA33452.1| GIY-YIG domain containing 2 [Pan troglodytes]
Length = 354
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 91 RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 150
Query: 104 F 104
F
Sbjct: 151 F 151
>gi|195152203|ref|XP_002017026.1| GL22073 [Drosophila persimilis]
gi|259511399|sp|B4GEU1.1|SLX1_DROPE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|194112083|gb|EDW34126.1| GL22073 [Drosophila persimilis]
Length = 291
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPP----IKTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL+ S + K YVG T N RR+KQHN G GGAK + PW I+ G
Sbjct: 17 YGVYLLCSQSLDSRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSKKGPWQMVMIVHG 76
Query: 104 F 104
F
Sbjct: 77 F 77
>gi|410173179|ref|XP_003960688.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 1 [Homo sapiens]
Length = 354
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 91 RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 150
Query: 104 F 104
F
Sbjct: 151 F 151
>gi|253698674|ref|YP_003019863.1| excinuclease ABC subunit C [Geobacter sp. M21]
gi|251773524|gb|ACT16105.1| Excinuclease ABC C subunit domain protein [Geobacter sp. M21]
Length = 93
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VY+I+ ++ + Y G TT+ RRL+QH GGAK + RP ++G HD+S
Sbjct: 3 WQVYIILCSDGTL--YTGITTDIARRLRQHG--TGGGAKYFRGRRPE-EVLFLEGGHDRS 57
>gi|73958512|ref|XP_859133.1| PREDICTED: structure-specific endonuclease subunit SLX1 isoform 2
[Canis lupus familiaris]
Length = 161
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQGF 104
VYL+ NP + YVG T N RR++QHNG + G +GR PW I+ GF
Sbjct: 15 GVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 72
>gi|88797186|ref|ZP_01112776.1| Excinuclease ABC, C subunit-like protein [Reinekea blandensis
MED297]
gi|88780055|gb|EAR11240.1| Excinuclease ABC, C subunit-like protein [Reinekea sp. MED297]
Length = 94
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W VY + + Y G TT+ RRL+QHNGEL GGA+ + + RP
Sbjct: 9 WWVYFVQCADGTF--YTGITTDPHRRLRQHNGELVGGARYTASRRP 52
>gi|444321316|ref|XP_004181314.1| hypothetical protein TBLA_0F02560 [Tetrapisispora blattae CBS 6284]
gi|387514358|emb|CCH61795.1| hypothetical protein TBLA_0F02560 [Tetrapisispora blattae CBS 6284]
Length = 324
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISACIIQGF 104
+ Y++ S + Y+G+T N RRL+QHNG L +GGA + Q RPW I GF
Sbjct: 11 YCCYILQSLHKRQSFYIGSTPNPFRRLRQHNGILNKGGAYRTHRQGTRPWEMIACIHGF 69
>gi|320167053|gb|EFW43952.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 376
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGFH 105
+ YL+ S NP K TY+G T N RR KQHN G+ +GGA + +PW + GF
Sbjct: 87 YGCYLLRSLNPKYKNITYIGFTVNPGRRYKQHNSGKEKGGAVFTDRRKPWQLVLCVYGFM 146
Query: 106 DQ 107
D+
Sbjct: 147 DK 148
>gi|67902450|ref|XP_681481.1| hypothetical protein AN8212.2 [Aspergillus nidulans FGSC A4]
gi|74593034|sp|Q5AU18.1|SLX1_EMENI RecName: Full=Structure-specific endonuclease subunit slx1
gi|40739591|gb|EAA58781.1| hypothetical protein AN8212.2 [Aspergillus nidulans FGSC A4]
gi|259480990|tpe|CBF74120.1| TPA: GIY-YIG catalytic domain containing protein (AFU_orthologue;
AFUA_5G03450) [Aspergillus nidulans FGSC A4]
Length = 409
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 64 YVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
Y+G+T + RRL QHNG +GGA+ A + RPW +++GF
Sbjct: 11 YIGSTPDPARRLAQHNGLCKGGARRTADEKRRPWEMVMVVEGF 53
>gi|156554325|ref|XP_001602968.1| PREDICTED: structure-specific endonuclease subunit slx1-like
[Nasonia vitripennis]
Length = 269
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 42 PNSNSRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISA 98
P + VYL+ N K TY+G T + RR+KQHN G+ GGA + PW
Sbjct: 5 PQDVEHFFGVYLLYCKNVKYKGRTYIGYTVDPKRRIKQHNAGKDFGGAWRTSNRGPWEMV 64
Query: 99 CIIQGF 104
I+ GF
Sbjct: 65 LIVHGF 70
>gi|56461734|ref|YP_157015.1| endonuclease [Idiomarina loihiensis L2TR]
gi|56180744|gb|AAV83466.1| Predicted endonuclease containing a URI domain [Idiomarina
loihiensis L2TR]
Length = 83
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
SW+VYLI + Y G TT+ RR+ +HN + + GAK ++A RP
Sbjct: 2 SWAVYLIKCADNTF--YTGVTTDIERRVNEHNTDDKKGAKYTRARRP 46
>gi|254582587|ref|XP_002499025.1| ZYRO0E01804p [Zygosaccharomyces rouxii]
gi|238942599|emb|CAR30770.1| ZYRO0E01804p [Zygosaccharomyces rouxii]
Length = 299
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S Y+G+T N RRL+QHNG L RGGA + + RPW ++ GF
Sbjct: 13 YCCYLLQSICKRQSFYIGSTPNPVRRLRQHNGILTRGGAYRTRREGTRPWEVIMVVYGF 71
>gi|198434798|ref|XP_002127269.1| PREDICTED: similar to GIY-YIG domain containing 2 [Ciona
intestinalis]
Length = 310
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S N K TY+G T N RR+ QHN G +GGA + PW I+ GF
Sbjct: 9 FGCYLLYSRNSKYKGRTYIGFTVNPERRISQHNAGASKGGAYRTSGRGPWDMTMIVHGF 67
>gi|357289961|gb|AET73274.1| hypothetical protein PGAG_00385 [Phaeocystis globosa virus 12T]
gi|357292325|gb|AET73661.1| hypothetical protein PGBG_00350 [Phaeocystis globosa virus 14T]
Length = 125
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS----QAGRPWISACIIQ 102
VY I +TN +TY+G T + +R++QHN ++GGA + AG W C ++
Sbjct: 5 VYFIEATNG--RTYIGATVDLDKRIRQHNKIIKGGAHQTSMQVDAGHSWNYHCYVE 58
>gi|336314301|ref|ZP_08569220.1| Putative endonuclease containing a URI domain protein
[Rheinheimera sp. A13L]
gi|335881314|gb|EGM79194.1| Putative endonuclease containing a URI domain protein
[Rheinheimera sp. A13L]
Length = 119
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W VY++ + + Y G +T RRL+QH+GEL GGAKA + P
Sbjct: 8 WFVYMVRTATGAL--YTGISTQPERRLRQHSGELTGGAKALKGKGP 51
>gi|426381833|ref|XP_004057537.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 1 [Gorilla gorilla gorilla]
Length = 354
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 91 RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 150
Query: 104 F 104
F
Sbjct: 151 F 151
>gi|159119740|ref|XP_001710088.1| Hypothetical protein GL50803_16475 [Giardia lamblia ATCC 50803]
gi|259511401|sp|A8B2Z8.1|SLX1_GIAIC RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|157438206|gb|EDO82414.1| hypothetical protein GL50803_16475 [Giardia lamblia ATCC 50803]
Length = 359
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLII--STNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y ++ S+ P + Y+G T N RR++QHN ++ GGA+ + PW + GF
Sbjct: 11 FACYCLVAESSESPKRCYIGFTNNPLRRIRQHNRKIAGGARKTSRYGPWRMVLFVGGF 68
>gi|313894268|ref|ZP_07827833.1| GIY-YIG catalytic domain protein [Veillonella sp. oral taxon 158
str. F0412]
gi|313441092|gb|EFR59519.1| GIY-YIG catalytic domain protein [Veillonella sp. oral taxon 158
str. F0412]
Length = 93
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 40 RTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISAC 99
+ S R + VYL+ ++ + Y G TT+ RR+ HNG + GGAK ++ RP ++
Sbjct: 4 KEDKSEERHY-VYLVRCSDDSL--YCGWTTDLERRIDAHNGHIPGGAKYTRGRRP-VTLV 59
Query: 100 IIQGFHDQSD 109
+ FH + +
Sbjct: 60 YAESFHHKYE 69
>gi|241638399|ref|XP_002409113.1| GIY-YIG domain-containing protein, putative [Ixodes scapularis]
gi|215501303|gb|EEC10797.1| GIY-YIG domain-containing protein, putative [Ixodes scapularis]
Length = 246
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELR-GGAKASQAGRPWISACIIQGF 104
+ YL+ TNP K TY+G T + RR+KQHN L+ GGA + W II GF
Sbjct: 9 YGCYLLYCTNPKYKGHTYIGFTVDPNRRVKQHNKGLKAGGAWRTSTKGQWDMPLIIHGF 67
>gi|193690675|ref|XP_001952337.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
[Acyrthosiphon pisum]
Length = 250
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELR-GGAKASQAGRPWISACIIQGF 104
+ VYL+ N K TY+G T + RR+KQHN ++ GGA+ + PW I+ GF
Sbjct: 9 YGVYLLYCLNEKSKGKTYIGYTKDPNRRIKQHNKGVKSGGARKTSLRGPWEMVLIVHGF 67
>gi|308812384|ref|XP_003083499.1| Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS)
[Ostreococcus tauri]
gi|116055380|emb|CAL58048.1| Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS), partial
[Ostreococcus tauri]
Length = 1210
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 33 RSQSQSKRTPNSNSRSW-SVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGAK 87
R S + +T S +R + YL+IS + K+YVG T N PRRL QHNG L GA+
Sbjct: 1149 RPSSTADQTTTSCARPLHACYLVISLDATKRGKSYVGYTINPPRRLAQHNGALANGAR 1206
>gi|194744231|ref|XP_001954598.1| GF16665 [Drosophila ananassae]
gi|259511397|sp|B3M0F3.1|SLX1_DROAN RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|190627635|gb|EDV43159.1| GF16665 [Drosophila ananassae]
Length = 299
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPPI----KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL+ S + K YVG T N RR+KQHN G GGAK + PW I+ G
Sbjct: 25 YGVYLLCSQSLDSRYRGKCYVGFTVNPKRRIKQHNRGCDFGGAKKTSRKGPWQMVMIVHG 84
Query: 104 F 104
F
Sbjct: 85 F 85
>gi|357631609|gb|EHJ79078.1| putative GIY-YIG domain containing 2 [Danaus plexippus]
Length = 329
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ NP K TY+G T + RR+ QHN G GGA + PW I+ GF
Sbjct: 11 YGVYLLYCINPKYKGRTYIGYTRDPNRRIIQHNRGTWAGGAHRTSKRGPWKMVMIVHGF 69
>gi|339241841|ref|XP_003376846.1| GIY-YIG domain-containing protein 1 [Trichinella spiralis]
gi|316974418|gb|EFV57909.1| GIY-YIG domain-containing protein 1 [Trichinella spiralis]
Length = 227
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 29 PTPIRSQSQSKRTPNSNSRSWSVYLIIS-TNPPI---KTYVGTTTNFPRRLKQHN-GELR 83
P+PI + N + YL++S + P+ K YVG T N RR+KQHN G
Sbjct: 28 PSPIPKFEYTVGFLKMNIGFYGCYLLVSESEKPLYRGKCYVGFTVNPERRIKQHNRGSRY 87
Query: 84 GGAKASQAGRPWISACIIQGF 104
GGA + PW ++ GF
Sbjct: 88 GGAWRTSNRGPWEMVLVVHGF 108
>gi|88705510|ref|ZP_01103220.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88700023|gb|EAQ97132.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 84
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 64 YVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
Y G T + RR++QHNGEL GGA ++A RP
Sbjct: 10 YTGVTRDLARRIRQHNGELVGGANYTRARRP 40
>gi|308161733|gb|EFO64169.1| GIY-YIG domain containing protein [Giardia lamblia P15]
Length = 359
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 49 WSVYLII--STNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y ++ S P + Y+G T N RR++QHN ++ GGA+ + PW + GF
Sbjct: 11 FACYCLVTESLESPKRCYIGFTNNPLRRIRQHNRKIAGGARKTSRYGPWRMVLFVGGF 68
>gi|441676201|ref|XP_003282666.2| PREDICTED: structure-specific endonuclease subunit SLX1-like
isoform 1 [Nomascus leucogenys]
Length = 354
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 91 RFFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 150
Query: 104 F 104
F
Sbjct: 151 F 151
>gi|332372746|gb|AEE61515.1| unknown [Dendroctonus ponderosae]
Length = 252
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 51 VYLIISTNPPI--KTYVGTTTNFPRRLKQHN-GELRGGA-KASQAGRPWISACIIQGFHD 106
VYL+ NP + Y+G T + RR+ +HN G+ GGA + SQ G PW I+ GF D
Sbjct: 8 VYLLYCENPKYLGRCYIGYTVDPNRRIVKHNKGKQYGGAYRTSQRG-PWTMVLIVHGFLD 66
Query: 107 Q 107
+
Sbjct: 67 E 67
>gi|342213732|ref|ZP_08706451.1| GIY-YIG catalytic domain protein [Veillonella sp. oral taxon 780
str. F0422]
gi|341597320|gb|EGS39879.1| GIY-YIG catalytic domain protein [Veillonella sp. oral taxon 780
str. F0422]
Length = 90
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 52 YLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
Y++ + + Y G TT+ +R++ HNGE++GGAK +++ RP
Sbjct: 8 YMVRCADGSL--YTGWTTDLEKRIRAHNGEIKGGAKYTRSRRP 48
>gi|259511462|sp|A5DFX7.2|SLX1_PICGU RecName: Full=Structure-specific endonuclease subunit SLX1
gi|190346077|gb|EDK38080.2| hypothetical protein PGUG_02178 [Meyerozyma guilliermondii ATCC
6260]
Length = 295
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
+ VY++ S P Y+G+T + RRL+QHNG+L+ GA ++ + RPW I F
Sbjct: 13 YGVYILQSEPSPRSFYIGSTPDPIRRLRQHNGDLKQGAFRTRRTSRRPWKMIAITHNF 70
>gi|383451237|ref|YP_005357958.1| hypothetical protein KQS_09855 [Flavobacterium indicum GPTSA100-9]
gi|380502859|emb|CCG53901.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 86
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
+ VY+I S + K Y+G T NF R+ +HN G KA+ PW+ C+++
Sbjct: 2 FYVYIIYSLDFD-KFYIGQTQNFEERILRHNS---GYEKATSPYIPWVKKCVLE 51
>gi|383451238|ref|YP_005357959.1| hypothetical protein KQS_09860 [Flavobacterium indicum GPTSA100-9]
gi|383451239|ref|YP_005357960.1| hypothetical protein KQS_09865 [Flavobacterium indicum GPTSA100-9]
gi|380502860|emb|CCG53902.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
gi|380502861|emb|CCG53903.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 86
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
+ VY+I S + K Y+G T NF R+ +HN G KA+ PW+ C+++
Sbjct: 2 FYVYIIYSLDFD-KFYIGQTQNFEERILRHNS---GYEKATSPYIPWVKKCVLE 51
>gi|196228381|ref|ZP_03127248.1| Excinuclease ABC C subunit domain protein [Chthoniobacter flavus
Ellin428]
gi|196227784|gb|EDY22287.1| Excinuclease ABC C subunit domain protein [Chthoniobacter flavus
Ellin428]
Length = 82
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW-ISACIIQGFHDQS 108
VY+++S P + YVG T + RL++HN G + RPW I+ I FHD++
Sbjct: 7 VYILVSEADPTRYYVGRTDDLEDRLRRHNA---GEVSYTSDHRPWKINVAI--AFHDRT 60
>gi|146421112|ref|XP_001486507.1| hypothetical protein PGUG_02178 [Meyerozyma guilliermondii ATCC
6260]
Length = 295
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--AGRPWISACIIQGF 104
+ VY++ S P Y+G+T + RRL+QHNG+L+ GA ++ + RPW I F
Sbjct: 13 YGVYILQSEPSPRSFYIGSTPDPIRRLRQHNGDLKQGAFRTRRTSRRPWKMIAITHNF 70
>gi|259511442|sp|C0S8C7.1|SLX1_PARBP RecName: Full=Structure-specific endonuclease subunit SLX1
gi|225683577|gb|EEH21861.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 423
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S Y+G+T + RRL QHNG+ G AK + + RPW I+ GF
Sbjct: 25 YCCYLLRSCVRHASLYIGSTPDPARRLAQHNGDRNGAAKRTLRENLRPWEMVAIVSGF 82
>gi|401423403|ref|XP_003876188.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492429|emb|CBZ27703.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 704
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACII 101
++R VYL+ S +P Y+G T N RRL+QHNGEL G + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCDGDFYIGYTVNPLRRLRQHNGELVNGARRTGRRGRPWTIVCCV 61
Query: 102 QGFHD 106
GF D
Sbjct: 62 SGFPD 66
>gi|391336279|ref|XP_003742509.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
[Metaseiulus occidentalis]
Length = 252
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 36 SQSKRTPNSNSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKASQAG 92
SQ+K T + + + VYL+ T P TY+G T + RR+KQHN G + GGA +
Sbjct: 3 SQAKST-SDDCNFFGVYLLSCTTPQYMGDTYIGFTVDPVRRIKQHNKGVVAGGAYTTNRK 61
Query: 93 RPWISACIIQGF 104
W ++ GF
Sbjct: 62 GTWDMTLVVHGF 73
>gi|167945479|ref|ZP_02532553.1| Excinuclease ABC, C subunit-like protein [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|345876958|ref|ZP_08828717.1| putative O-methyltransferase [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344225980|gb|EGV52324.1| putative O-methyltransferase [endosymbiont of Riftia pachyptila
(vent Ph05)]
Length = 99
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W VY++ + + Y G TT+ RRL +HN + R GA+ ++ RP
Sbjct: 15 DWVVYILCCADDTL--YTGITTDLARRLTEHNQDNRLGARYTRVRRP 59
>gi|355690189|gb|AER99074.1| GIY-YIG domain containing 2 isoform 1 [Mustela putorius furo]
Length = 71
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLLVH 70
Query: 103 G 103
G
Sbjct: 71 G 71
>gi|395747670|ref|XP_002826341.2| PREDICTED: structure-specific endonuclease subunit SLX1 [Pongo
abelii]
Length = 354
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 47 RSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQG 103
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++ G
Sbjct: 91 RFFGVYLLYCLNPRYRGRVYVGFTVNPGRRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 150
Query: 104 F 104
F
Sbjct: 151 F 151
>gi|294792710|ref|ZP_06757857.1| GIY-YIG domain protein [Veillonella sp. 6_1_27]
gi|294794461|ref|ZP_06759597.1| GIY-YIG domain protein [Veillonella sp. 3_1_44]
gi|417000461|ref|ZP_11940677.1| GIY-YIG catalytic domain protein [Veillonella parvula
ACS-068-V-Sch12]
gi|294454791|gb|EFG23164.1| GIY-YIG domain protein [Veillonella sp. 3_1_44]
gi|294456609|gb|EFG24972.1| GIY-YIG domain protein [Veillonella sp. 6_1_27]
gi|333976163|gb|EGL77035.1| GIY-YIG catalytic domain protein [Veillonella parvula
ACS-068-V-Sch12]
Length = 132
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
+YL+ ++ + Y G TT+ RR+ HNG + GGAK ++ RP ++ + FH + +
Sbjct: 53 IYLVRCSDDSL--YCGWTTDLKRRIDAHNGHIPGGAKYTRGRRP-VTLVYAESFHQKQE 108
>gi|395846431|ref|XP_003795908.1| PREDICTED: structure-specific endonuclease subunit SLX1 [Otolemur
garnettii]
Length = 274
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VY++ NP + YVG T N RR++QHN G +GGA + PW ++
Sbjct: 11 GRFFGVYVLYCLNPQHLGRIYVGFTVNPVRRVQQHNGGRKKGGAWRTSGLGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|157870676|ref|XP_001683888.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|75033571|sp|Q4Q9W0.1|SLX1_LEIMA RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|68126955|emb|CAJ05240.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 704
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACII 101
++R VYL+ S +P + Y+G + N RRL+QHNGEL G + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGDFYIGYSVNPLRRLRQHNGELVNGARRTGRRGRPWTIVCCV 61
Query: 102 QGFHD 106
GF D
Sbjct: 62 SGFPD 66
>gi|363750346|ref|XP_003645390.1| hypothetical protein Ecym_3061 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889024|gb|AET38573.1| Hypothetical protein Ecym_3061 [Eremothecium cymbalariae
DBVPG#7215]
Length = 298
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 52 YLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISACIIQGF 104
YL+ S + Y+G+T N RRL+QHNG L +GGA + + RPW + GF
Sbjct: 17 YLLRSIPKRLSYYIGSTPNPVRRLRQHNGLLTKGGAYRTKREGTRPWELVVFVYGF 72
>gi|269798643|ref|YP_003312543.1| excinuclease ABC subunit C [Veillonella parvula DSM 2008]
gi|269095272|gb|ACZ25263.1| Excinuclease ABC C subunit domain protein [Veillonella parvula DSM
2008]
Length = 83
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
+YL+ ++ + Y G TT+ RR+ HNG + GGAK ++ RP ++ + FH + +
Sbjct: 4 IYLVRCSDDSL--YCGWTTDLKRRIDAHNGHIPGGAKYTRGRRP-VTLVYAESFHQKQE 59
>gi|255078336|ref|XP_002502748.1| predicted protein [Micromonas sp. RCC299]
gi|226518014|gb|ACO64006.1| predicted protein [Micromonas sp. RCC299]
Length = 420
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S +P K +YVG T N RR++QHNG L GA+ ++ RP ++ GF
Sbjct: 18 ACYLVGSLDPARKGRSYVGFTVNPERRIRQHNGVLAAGARYTRRLRPCEMVLLVHGF 74
>gi|375111009|ref|ZP_09757222.1| excinuclease ABC subunit C [Alishewanella jeotgali KCTC 22429]
gi|374568906|gb|EHR40076.1| excinuclease ABC subunit C [Alishewanella jeotgali KCTC 22429]
Length = 91
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKA 88
W +YLI + + Y G +T+ RRL+QH GEL GGAK+
Sbjct: 4 WYLYLIRTAQGQL--YTGISTDPVRRLRQHRGELAGGAKS 41
>gi|383451236|ref|YP_005357957.1| hypothetical protein KQS_09850 [Flavobacterium indicum GPTSA100-9]
gi|380502858|emb|CCG53900.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 86
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQ 102
+ VY+I S + K Y+G T NF R+ +HN G KA+ PW+ C+++
Sbjct: 2 FYVYIIYSLDFD-KFYIGQTQNFHERILRHNS---GYEKATSPYIPWVKKCVLE 51
>gi|282849793|ref|ZP_06259177.1| GIY-YIG catalytic domain protein [Veillonella parvula ATCC 17745]
gi|282580730|gb|EFB86129.1| GIY-YIG catalytic domain protein [Veillonella parvula ATCC 17745]
Length = 128
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQSD 109
+YL+ ++ + Y G TT+ RR+ HNG + GGAK ++ RP ++ + FH + +
Sbjct: 49 IYLVRCSDDSL--YCGWTTDLKRRIDAHNGHIPGGAKYTRGRRP-VTLVYAESFHQKQE 104
>gi|393762754|ref|ZP_10351380.1| excinuclease ABC subunit C [Alishewanella agri BL06]
gi|392606376|gb|EIW89261.1| excinuclease ABC subunit C [Alishewanella agri BL06]
Length = 91
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKA 88
W +YLI + + Y G +T+ RRL+QH GEL GGAK+
Sbjct: 4 WYLYLIRTAQGQL--YTGISTDPVRRLRQHRGELAGGAKS 41
>gi|397169677|ref|ZP_10493109.1| excinuclease ABC subunit C [Alishewanella aestuarii B11]
gi|396088981|gb|EJI86559.1| excinuclease ABC subunit C [Alishewanella aestuarii B11]
Length = 91
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKA 88
W +YLI + + Y G +T+ RRL+QH GEL GGAK+
Sbjct: 4 WYLYLIRTAQGQL--YTGISTDPVRRLRQHRGELAGGAKS 41
>gi|333892184|ref|YP_004466059.1| putative URI domain endonuclease [Alteromonas sp. SN2]
gi|332992202|gb|AEF02257.1| putative URI domain endonuclease [Alteromonas sp. SN2]
Length = 126
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+W +YLI N + Y G TT+ RR+ QH GE+ GGA+A + P
Sbjct: 22 TWYLYLI--ENKLGQLYTGITTSPERRISQHRGEIVGGARALKGKGP 66
>gi|259511464|sp|C1H0K4.2|SLX1_PARBA RecName: Full=Structure-specific endonuclease subunit SLX1
Length = 392
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 52 YLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
YL+ S Y+G+T + RRL QHNG+ G AK + + RPW I+ GF
Sbjct: 28 YLLRSCVRHASLYIGSTPDPARRLAQHNGDRYGAAKRTLRENLRPWEMVAIVSGF 82
>gi|295666952|ref|XP_002794026.1| GIY-YIG catalytic domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277679|gb|EEH33245.1| GIY-YIG catalytic domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 379
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 52 YLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
YL+ S Y+G+T + RRL QHNG+ G AK + + RPW I+ GF
Sbjct: 28 YLLRSCVRHASLYIGSTPDPARRLAQHNGDRYGAAKRTLRENLRPWEMVAIVSGF 82
>gi|255719752|ref|XP_002556156.1| KLTH0H06358p [Lachancea thermotolerans]
gi|238942122|emb|CAR30294.1| KLTH0H06358p [Lachancea thermotolerans CBS 6340]
Length = 314
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 35 QSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAG 92
+S+SK ++ + YL+ S Y+G+T N RRL+QHNG L G+ + + G
Sbjct: 2 KSRSKTKQHAIPDFYCCYLLRSVPKKQSFYIGSTPNPVRRLRQHNGTLANGSAYRTKKTG 61
Query: 93 -RPWISACIIQGF 104
RPW + GF
Sbjct: 62 FRPWRMIACVYGF 74
>gi|383935745|ref|ZP_09989178.1| UPF0213 protein [Rheinheimera nanhaiensis E407-8]
gi|383703064|dbj|GAB59269.1| UPF0213 protein [Rheinheimera nanhaiensis E407-8]
Length = 91
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKA 88
W +Y++ + + Y G +T+ RRL+QH+G+L GGAKA
Sbjct: 4 WYLYMVQTAAGVL--YTGISTDPARRLRQHSGQLAGGAKA 41
>gi|401680440|ref|ZP_10812356.1| GIY-YIG catalytic domain protein [Veillonella sp. ACP1]
gi|400218521|gb|EJO49400.1| GIY-YIG catalytic domain protein [Veillonella sp. ACP1]
Length = 98
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 45 NSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
N + Y++ + + Y G TT+ +RL HNG ++GGAK ++ RP
Sbjct: 2 NHEQFFTYIVRCADESL--YCGWTTDLKKRLDAHNGVIKGGAKYTKCRRP 49
>gi|417956568|ref|ZP_12599532.1| hypothetical protein VIOR3934_15286 [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|342809408|gb|EGU44527.1| hypothetical protein VIOR3934_15286 [Vibrio orientalis CIP 102891
= ATCC 33934]
Length = 153
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 42 PNSNS-RSWSVYLI--ISTNPPIKTYVGTTTNFPRRLKQHNGELRGG 85
PNS S R+ SVY+I N P + YVG T NF RRL +H +L G
Sbjct: 49 PNSYSVRNHSVYIIKVEGENDPDRVYVGVTNNFARRLNEHKEQLERG 95
>gi|386399331|ref|ZP_10084109.1| putative endonuclease containing a URI domain [Bradyrhizobium sp.
WSM1253]
gi|385739957|gb|EIG60153.1| putative endonuclease containing a URI domain [Bradyrhizobium sp.
WSM1253]
Length = 80
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW--ISACIIQGFHD 106
WSVY++ S P + YVG T N RR+ +HN G + + +PW I C F D
Sbjct: 2 WSVYILRSIEFPEQEYVGATENLKRRIPEHNA---GKSTHTAKFKPWKLIWYC---AFRD 55
Query: 107 Q 107
+
Sbjct: 56 K 56
>gi|303230483|ref|ZP_07317242.1| GIY-YIG catalytic domain protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302514849|gb|EFL56832.1| GIY-YIG catalytic domain protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 98
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 45 NSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+ + Y++ + + Y G TT+ +RL HNG ++GGAK ++ RP
Sbjct: 2 DQEQFFTYIVRCADESL--YCGWTTDIKKRLDAHNGVIKGGAKYTKCRRP 49
>gi|195038477|ref|XP_001990683.1| GH19497 [Drosophila grimshawi]
gi|259511445|sp|B4JGW7.1|SLX1_DROGR RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|193894879|gb|EDV93745.1| GH19497 [Drosophila grimshawi]
Length = 286
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 45 NSRSWSVYLIISTNPPI----KTYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISAC 99
R + VYL+ S + K YVG T N RR+ QHN G GGA + PW
Sbjct: 14 KGRFYGVYLLCSQSLDARYRGKCYVGFTVNPKRRIGQHNRGCDFGGAHKTSRKGPWQMVM 73
Query: 100 IIQGF 104
I+ GF
Sbjct: 74 IVHGF 78
>gi|116792413|gb|ABK26356.1| unknown [Picea sitchensis]
Length = 262
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 49 WSVYLIISTNPPIK-TYVGTTTNFPRRLKQHNGELRGGA---KASQAGR--------PWI 96
++ YL+ S P K TY+G T N RR++QHNGE++ A K Q R PW
Sbjct: 47 FACYLLRSLRPRCKATYIGFTVNPRRRIRQHNGEVKFRACRTKKKQQFRPCRTKKKQPWE 106
Query: 97 SACIIQGF 104
+ GF
Sbjct: 107 MVLCVYGF 114
>gi|239908280|ref|YP_002955021.1| hypothetical protein DMR_36440 [Desulfovibrio magneticus RS-1]
gi|239798146|dbj|BAH77135.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 92
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
SW VY++ ++ + Y G T + RR+ +HNG GGA+ ++ RP
Sbjct: 2 SWFVYIVECSDDTL--YCGITCDMDRRINEHNGLQPGGARYTRNRRP 46
>gi|197116419|ref|YP_002136846.1| URI domain endonuclease [Geobacter bemidjiensis Bem]
gi|197085779|gb|ACH37050.1| GIY-YIG domain nuclease, putative [Geobacter bemidjiensis Bem]
Length = 93
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VY+I+ ++ Y G TT+ RRL+QH GAK + RP ++G HD+S
Sbjct: 3 WQVYIILCSDGTF--YTGITTDIARRLRQHATG--SGAKYFRGRRPE-EVLFLEGGHDRS 57
>gi|10440128|dbj|BAB15654.1| unnamed protein product [Homo sapiens]
Length = 255
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR P ++
Sbjct: 11 GRFFGVYLLYWLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPREMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>gi|167524092|ref|XP_001746382.1| hypothetical protein [Monosiga brevicollis MX1]
gi|259511404|sp|A9V196.1|SLX1_MONBE RecName: Full=Structure-specific endonuclease subunit SLX1 homolog
gi|163775144|gb|EDQ88769.1| predicted protein [Monosiga brevicollis MX1]
Length = 420
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 65 VGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACIIQGF 104
+G TT+ RRL+QHN E+ GGA + ++A W A I+ GF
Sbjct: 43 IGFTTDPVRRLRQHNSEIGGGAVRTTRAKGSWDMAAIVYGF 83
>gi|429759828|ref|ZP_19292323.1| GIY-YIG catalytic domain protein [Veillonella atypica KON]
gi|429179048|gb|EKY20310.1| GIY-YIG catalytic domain protein [Veillonella atypica KON]
Length = 104
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 45 NSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+ + Y++ + + Y G TT+ +RL HNG ++GGAK ++ RP
Sbjct: 8 DQEQFFTYIVRCADESL--YCGWTTDIKKRLDAHNGVIKGGAKYTKCRRP 55
>gi|299751691|ref|XP_002911673.1| structure-specific endonuclease catalytic subunit [Coprinopsis
cinerea okayama7#130]
gi|298409490|gb|EFI28179.1| structure-specific endonuclease catalytic subunit [Coprinopsis
cinerea okayama7#130]
Length = 121
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 77 QHNGELRGGAKASQAGRPWISACIIQGF 104
QHNGE+ GAK ++ GRPW ++ GF
Sbjct: 51 QHNGEVAMGAKKTKNGRPWAMQMLVHGF 78
>gi|393908020|gb|EFO16704.2| GIY-YIG catalytic domain-containing protein [Loa loa]
Length = 324
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 33 RSQSQSKRTPNSNSRSWSVYLIIS--TNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAK 87
+ + ++ R P+ + VY ++S +N K Y+G T N RR++QHN G+ GGAK
Sbjct: 84 KKRDKAHRVPSILDEFFGVYCLLSRSSNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAK 143
Query: 88 ASQAGRPW 95
+ PW
Sbjct: 144 KTDHRGPW 151
>gi|255089843|ref|XP_002506843.1| predicted protein [Micromonas sp. RCC299]
gi|226522116|gb|ACO68101.1| predicted protein [Micromonas sp. RCC299]
Length = 161
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 47 RSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
+ W VY++ + K Y G T + RR++QH G GGAKA +A P
Sbjct: 35 KGWLVYMVETRGG--KLYTGITVSLSRRMEQHAGLRTGGAKAFRADPP 80
>gi|192362142|ref|YP_001982130.1| GIY-YIG catalytic domain-containing protein [Cellvibrio japonicus
Ueda107]
gi|190688307|gb|ACE85985.1| GIY-YIG catalytic domain protein [Cellvibrio japonicus Ueda107]
Length = 108
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQS 108
W VY+I++T+ + Y G TTN RR +H + GAK + GR ++ C+++ D+S
Sbjct: 3 WFVYMILATDSQL--YSGITTNMARRWHEHRSG-KTGAKYFR-GRAPMALCLLEAAADRS 58
>gi|404496298|ref|YP_006720404.1| GIY-YIG domain nuclease [Geobacter metallireducens GS-15]
gi|78193905|gb|ABB31672.1| GIY-YIG domain nuclease, putative [Geobacter metallireducens
GS-15]
Length = 86
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
SW VY+I+ ++ + Y G TT+ RR +QH G GAK + RP
Sbjct: 2 SWQVYIILCSDNSL--YTGITTDLDRRFRQHAGGT--GAKYFRGRRP 44
>gi|363540251|ref|YP_004894658.1| mg607 gene product [Megavirus chiliensis]
gi|448825590|ref|YP_007418521.1| putative endo/excinuclease amino terminal domain protein [Megavirus
lba]
gi|350611416|gb|AEQ32860.1| putative endo/excinuclease amino terminal domain protein [Megavirus
chiliensis]
gi|371943965|gb|AEX61793.1| uncharacterized endo_excinuclease aminoterminal domain protein
[Megavirus courdo7]
gi|425701525|gb|AFX92687.1| putative endo/excinuclease amino terminal domain protein [Megavirus
courdo11]
gi|444236775|gb|AGD92545.1| putative endo/excinuclease amino terminal domain protein [Megavirus
lba]
Length = 174
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL----RGGAKASQAGRPWISACIIQG 103
W YL++S + TY+G++ N P+RL HN R GAK ++ + WI II G
Sbjct: 3 DWVCYLLMSLDSN-DTYIGSSNNQPKRLNAHNNNNPNIKRTGAKRTR-NQTWIPIIIISG 60
Query: 104 FHDQ 107
FHD+
Sbjct: 61 FHDK 64
>gi|347359735|ref|YP_004849517.1| excinuclease ABC C subunit domain-containing protein [Desulfovibrio
alaskensis G20]
gi|342906267|gb|AEL79408.1| Excinuclease ABC C subunit domain protein [Desulfovibrio alaskensis
G20]
Length = 92
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRG-GAKASQAGRPWISACIIQGFHDQ 107
W VYL+ + Y G TT+ RRL +HN RG GAK +++ RP +S + F D+
Sbjct: 3 WVVYLLACADGT--QYCGVTTDMDRRLDEHN---RGCGAKYTRSRRP-VSLLVSASFPDR 56
Query: 108 S 108
S
Sbjct: 57 S 57
>gi|312092521|ref|XP_003147366.1| GIY-YIG catalytic domain-containing protein [Loa loa]
Length = 331
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 33 RSQSQSKRTPNSNSRSWSVYLIIS--TNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAK 87
+ + ++ R P+ + VY ++S +N K Y+G T N RR++QHN G+ GGAK
Sbjct: 84 KKRDKAHRVPSILDEFFGVYCLLSRSSNRYFKNRCYIGYTVNPNRRIRQHNAGKEFGGAK 143
Query: 88 ASQAGRPW 95
+ PW
Sbjct: 144 KTDHRGPW 151
>gi|398825317|ref|ZP_10583618.1| putative endonuclease containing a URI domain containing protein
[Bradyrhizobium sp. YR681]
gi|398223925|gb|EJN10253.1| putative endonuclease containing a URI domain containing protein
[Bradyrhizobium sp. YR681]
Length = 80
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW 95
W VY+I S P + Y+G T + RRL +HN G + + +PW
Sbjct: 2 WYVYIIRSIEFPDQEYIGATEDLKRRLPEHNA---GKSAHTAKFKPW 45
>gi|407801780|ref|ZP_11148623.1| endonuclease [Alcanivorax sp. W11-5]
gi|407024097|gb|EKE35841.1| endonuclease [Alcanivorax sp. W11-5]
Length = 93
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
W VY++ + + Y G T + RRL HN + R GA+ ++A RP
Sbjct: 10 WFVYILRCADASL--YTGITNDLQRRLLAHNNDDRSGARYTRARRP 53
>gi|326433300|gb|EGD78870.1| GIY-YIG domain-containing protein 1 [Salpingoeca sp. ATCC 50818]
Length = 384
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 52 YLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACIIQGF 104
YL+ T P + TY+G + + RRL+QHNGE++GGA + ++ W + GF
Sbjct: 58 YLLTGTQPRTRKRTYIGFSVDPRRRLRQHNGEVKGGARRTARCKGSWKMVLFVFGF 113
>gi|355756697|gb|EHH60305.1| Structure-specific endonuclease subunit SLX1 [Macaca
fascicularis]
Length = 178
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR 93
R + VYL+ NP + YVG T N RR++QHNG + G +GR
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGR 60
>gi|373951517|ref|ZP_09611478.1| Excinuclease ABC C subunit domain protein [Shewanella baltica
OS183]
gi|386322662|ref|YP_006018779.1| Excinuclease ABC C subunit domain-containing protein [Shewanella
baltica BA175]
gi|333816807|gb|AEG09473.1| Excinuclease ABC C subunit domain protein [Shewanella baltica
BA175]
gi|373888117|gb|EHQ17009.1| Excinuclease ABC C subunit domain protein [Shewanella baltica
OS183]
Length = 166
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 16/82 (19%)
Query: 12 VKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNF 71
V + NP L S+ PTPI+S S W +YL+ N + Y G TTN
Sbjct: 55 VTEASLNPVPLKSAPLKPTPIKSSSL-----------WYLYLVRCANGHL--YTGVTTNV 101
Query: 72 PRRLKQHNGELRGGAKASQAGR 93
RR +H GG K+++ R
Sbjct: 102 ARRFSEHQS---GGIKSAKYLR 120
>gi|406986894|gb|EKE07383.1| hypothetical protein ACD_18C00105G0006 [uncultured bacterium]
Length = 99
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQG 103
S W I+ + K YVGTT N +RL++HN G S GR + +
Sbjct: 2 EESSKWHYVYILYSLKDFKLYVGTTINLKKRLERHN----SGMNTSTKGRRPLILIFAES 57
Query: 104 FHDQSD 109
F ++ D
Sbjct: 58 FLNKKD 63
>gi|335307559|ref|XP_003360882.1| PREDICTED: LOW QUALITY PROTEIN: structure-specific endonuclease
subunit SLX1-like, partial [Sus scrofa]
Length = 141
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR +QHN +GR PW I+
Sbjct: 1 GRFFGVYLLYCLNPRHRGRVYVGFTVNPARREQQHNAXXXXXXAWRTSGRGPWEMVLIVH 60
Query: 103 GF 104
GF
Sbjct: 61 GF 62
>gi|304312074|ref|YP_003811672.1| endonuclease containing URI domain [gamma proteobacterium HdN1]
gi|301797807|emb|CBL46029.1| Predicted endonuclease containing URI domain [gamma proteobacterium
HdN1]
Length = 96
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 42 PNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACII 101
P + W VY++ + + Y G TT+ PRRL +HN R GA+ ++ RP +
Sbjct: 4 PTQCTAPWFVYILRCADGTL--YTGITTDLPRRLIEHNETPR-GARYTRPRRP-VRLVYA 59
Query: 102 QGFHDQSD 109
+G D+++
Sbjct: 60 EGHQDRAE 67
>gi|182413752|ref|YP_001818818.1| excinuclease ABC subunit C [Opitutus terrae PB90-1]
gi|177840966|gb|ACB75218.1| Excinuclease ABC C subunit domain protein [Opitutus terrae PB90-1]
Length = 113
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGFHDQ 107
VY++ ST+ P + YVG+T N R++ HN G + + RPW C F D+
Sbjct: 11 VYILESTHTPSEKYVGSTDNLRGRIEDHNA---GRSPHTAKFRPWNLVC-YHAFADE 63
>gi|156062718|ref|XP_001597281.1| hypothetical protein SS1G_01475 [Sclerotinia sclerotiorum 1980]
gi|154696811|gb|EDN96549.1| hypothetical protein SS1G_01475 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 78
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA 86
+ YL+ ST Y+G+T N RRL+QHNG +GGA
Sbjct: 11 YCCYLLRSTVRHNGLYIGSTPNPVRRLRQHNGLAKGGA 48
>gi|395327548|gb|EJF59947.1| hypothetical protein DICSQDRAFT_64131 [Dichomitus squalens LYAD-421
SS1]
Length = 106
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 64 YVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
Y+ + PR QHNG + GA ++ RPW+ I+ GF
Sbjct: 21 YLLKSVRTPRSTAQHNGIISQGAWKTKQNRPWVMQMIVHGF 61
>gi|148251728|ref|YP_001236313.1| hypothetical protein BBta_0107 [Bradyrhizobium sp. BTAi1]
gi|146403901|gb|ABQ32407.1| hypothetical protein BBta_0107 [Bradyrhizobium sp. BTAi1]
Length = 83
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNG 80
W VY+I S P + YVG T + +RLK HN
Sbjct: 2 WYVYIIRSVTFPDQEYVGATADLRQRLKDHNA 33
>gi|397594174|gb|EJK56165.1| hypothetical protein THAOC_24000, partial [Thalassiosira oceanica]
Length = 2759
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 45 NSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+R+ VYL+ S TYVG T + RR +HN + + RPW I G
Sbjct: 2629 ETRTGYVYLLASVRNLDTTYVGQTIHLKRRFSEHNSGNGSTGTCNASDRPWALVGYICGL 2688
>gi|217971353|ref|YP_002356104.1| excinuclease ABC subunit C domain-containing protein [Shewanella
baltica OS223]
gi|217496488|gb|ACK44681.1| Excinuclease ABC C subunit domain protein [Shewanella baltica
OS223]
Length = 166
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Query: 12 VKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNF 71
VK NP L+S+ PTPI+S S W +YL+ N + Y G TT+
Sbjct: 55 VKEDALNPVPLNSAPLKPTPIKSSS-----------FWYLYLVRCANGHL--YTGVTTDV 101
Query: 72 PRRLKQHN 79
RR +H
Sbjct: 102 ARRFSEHQ 109
>gi|259511441|sp|C1GJU5.1|SLX1_PARBD RecName: Full=Structure-specific endonuclease subunit SLX1
gi|226287198|gb|EEH42711.1| GIY-YIG catalytic domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 417
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPW 95
+ YL+ S Y+G+T + RRL QHNG+ G AK + + RPW
Sbjct: 25 YCCYLLRSCVRHASLYIGSTPDPARRLAQHNGDRNGAAKRTLRENLRPW 73
>gi|424513540|emb|CCO66162.1| predicted protein [Bathycoccus prasinos]
Length = 398
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 62 KTYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGF 104
KTYVG T N RRL QHNG+ GAK ++ RP + GF
Sbjct: 46 KTYVGFTVNPKRRLLQHNGQYANAGAKYTKKLRPCEMVLCVYGF 89
>gi|456351683|dbj|BAM86128.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 83
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNG 80
W VY+I S P + YVG T + +RLK HN
Sbjct: 2 WYVYIIRSVAFPDQEYVGATADIGQRLKDHNA 33
>gi|51246572|ref|YP_066456.1| hypothetical protein DP2720 [Desulfotalea psychrophila LSv54]
gi|54036626|sp|Q6AJN1.1|Y2720_DESPS RecName: Full=UPF0213 protein DP2720
gi|50877609|emb|CAG37449.1| hypothetical protein DP2720 [Desulfotalea psychrophila LSv54]
Length = 110
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 42 PNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRP 94
P ++ +W VY++ + + Y G TTN RR+ +HN + GA+ +++ RP
Sbjct: 7 PETDRPAWFVYIVQCADGTL--YTGITTNIARRITEHNSSAK-GARYTRSRRP 56
>gi|372270363|ref|ZP_09506411.1| excinuclease ABC subunit C [Marinobacterium stanieri S30]
Length = 78
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 64 YVGTTTNFPRRLKQHNGELRG-GAKASQAGRPWISACIIQGFHDQS 108
Y G TT+ RRL +HNG+ G GA+ ++A RP + + HD+S
Sbjct: 10 YTGVTTDLDRRLAEHNGDRAGKGARYTRARRP-VELVWHEAGHDRS 54
>gi|170056419|ref|XP_001864021.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876118|gb|EDS39501.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 66
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 49 WSVYLIISTNPPIK----TYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPW 95
+ VYL++S +P K TY+G T + RR+KQHN + GGAK + PW
Sbjct: 11 YGVYLLVSKSPNPKFGGRTYIGYTVDPNRRIKQHNSGQDGGGAKRTSNRGPW 62
>gi|294894436|ref|XP_002774832.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880503|gb|EER06648.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 468
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 73 RRLKQHNGEL-RGGAKASQAGRPWISACIIQGFHDQ 107
+R++QHNGEL GGA ++ RPW + GF Q
Sbjct: 192 KRIRQHNGELNNGGAHRTKRHRPWKMLLVCYGFSSQ 227
>gi|259490486|ref|NP_001158952.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
gi|195610554|gb|ACG27107.1| holiday junction resolvase, S1x1p, URI domain nuclease [Zea mays]
Length = 74
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 49 WSVYLIISTNPPIK-TYVGTTTNFPRRL 75
W VYLI S+ I+ TYVG TT+FPRRL
Sbjct: 49 WCVYLIASSR--IRRTYVGVTTDFPRRL 74
>gi|294943085|ref|XP_002783755.1| hypothetical protein Pmar_PMAR016236 [Perkinsus marinus ATCC
50983]
gi|239896437|gb|EER15551.1| hypothetical protein Pmar_PMAR016236 [Perkinsus marinus ATCC
50983]
Length = 125
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 51 VYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW 95
VYL++S++ +TY+GT T+ +R++QHN ++ + RPW
Sbjct: 11 VYLLMSSSTS-QTYIGTCTDLDQRVRQHNSGHGARYTSALSRRPW 54
>gi|148685464|gb|EDL17411.1| GIY-YIG domain containing 2, isoform CRA_a [Mus musculus]
Length = 73
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGA 86
R + VYL+ NP + YVG T N RR++QHN G +GGA
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGA 51
>gi|146337273|ref|YP_001202321.1| excinuclease ABC subunit C [Bradyrhizobium sp. ORS 278]
gi|146190079|emb|CAL74071.1| hypothetical protein; putative Excinuclease ABC, C subunit,
N-terminal (fragment) [Bradyrhizobium sp. ORS 278]
Length = 83
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNG 80
W VY+I S P + Y+G T + +RLK HN
Sbjct: 2 WYVYIIRSVAYPEQEYIGATADIRQRLKDHNA 33
>gi|302844666|ref|XP_002953873.1| hypothetical protein VOLCADRAFT_106146 [Volvox carteri f.
nagariensis]
gi|300260981|gb|EFJ45197.1| hypothetical protein VOLCADRAFT_106146 [Volvox carteri f.
nagariensis]
Length = 530
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 5 LSRKFPAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTY 64
R F N NP+PSKL +S + P PI QS T S + NPP T
Sbjct: 175 FQRAFDHAANGNPHPSKLITSPAGPKPIAPQSAPPATAADALPGPSPAGLRCINPP--TR 232
Query: 65 VGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQG 103
G+ PR G KA Q P +A I G
Sbjct: 233 PGSLAGLPR------GSAAVLPKAPQTAPPVAAARITAG 265
>gi|254445046|ref|ZP_05058522.1| hypothetical protein VDG1235_3289 [Verrucomicrobiae bacterium
DG1235]
gi|198259354|gb|EDY83662.1| hypothetical protein VDG1235_3289 [Verrucomicrobiae bacterium
DG1235]
Length = 87
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 42 PNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPW 95
PNS + VY+++S + + YVGTT N +RLK+HN GG + PW
Sbjct: 4 PNSITSFHYVYVLVSGDGKHR-YVGTTQNLEQRLKKHNS---GGVPHTSRHVPW 53
>gi|412988596|emb|CCO17932.1| predicted protein [Bathycoccus prasinos]
Length = 2204
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 6 SRKFPAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNS-----NSRSWSVYLIISTNPP 60
SRK P K++ PSK S+ S+ TP++ Q+ K+ ++ +SR+ + +++ P
Sbjct: 1385 SRKTPIKKSKVATPSKKSAVSARSTPLKKQTTPKKASSAIRSLPSSRAGTPRKVVAATPS 1444
Query: 61 IKTYVGTTTNFPRR 74
+T + N PR+
Sbjct: 1445 KRT---SARNTPRK 1455
>gi|401417926|ref|XP_003873455.1| putative protein kinase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489685|emb|CBZ24945.1| putative protein kinase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 992
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 10 PAVKNRNPNPSKLSSSSSSPTPIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTT 69
P+ + R+ S LS+SS SP P+RS S++ P S S ++S++P I T
Sbjct: 24 PSAQQRHAQQSALSTSSLSPPPLRSDSRTAAAPGSAS-------LVSSSPGIST------ 70
Query: 70 NFPRRLK--------QHNGELRGGAKASQAG 92
PR L +H G GGA Q G
Sbjct: 71 -APRHLDTSASGAGFRHPGSTSGGAAYDQPG 100
>gi|254447787|ref|ZP_05061252.1| excinuclease ABC, C subunit domain protein [gamma proteobacterium
HTCC5015]
gi|198262567|gb|EDY86847.1| excinuclease ABC, C subunit domain protein [gamma proteobacterium
HTCC5015]
Length = 111
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 45 NSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQG 103
+S++W VY ++ + + Y G TT+ +RLK+HN E GA+ +++ RP + C ++
Sbjct: 2 SSKAWWVYSLLCADNTL--YTGITTDPQKRLKEHN-ESPKGARYTRSRRP-VQLCYLEA 56
>gi|168703932|ref|ZP_02736209.1| Excinuclease ABC, C subunit domain protein [Gemmata obscuriglobus
UQM 2246]
Length = 105
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 31 PIRSQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNG 80
P R++SQS P + + W VY++ + + Y G TT+ RRL QHN
Sbjct: 2 PPRARSQS---PKAKNPKWVVYILRCADGTL--YTGITTDLNRRLAQHNA 46
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.125 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,820,028,712
Number of Sequences: 23463169
Number of extensions: 67427891
Number of successful extensions: 328583
Number of sequences better than 100.0: 530
Number of HSP's better than 100.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 327902
Number of HSP's gapped (non-prelim): 655
length of query: 109
length of database: 8,064,228,071
effective HSP length: 77
effective length of query: 32
effective length of database: 6,257,564,058
effective search space: 200242049856
effective search space used: 200242049856
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)