BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047362
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B6JY16|SLX1_SCHJY Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=slx1 PE=3 SV=1
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 49 WSVYLIISTNPPIK-TYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL++S + Y+G+T + RRL+QHNGE++GGA ++ RPW AC + GF
Sbjct: 3 YCCYLLVSEKAASRSVYIGSTPDPARRLRQHNGEIKGGAYKTKRSRPWKVACFVHGF 59
>sp|Q9P7M3|SLX1_SCHPO Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=slx1 PE=1 SV=1
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 49 WSVYLIIS--TNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+ YL+ S T Y+G+T + PRRL+QHNGE+ GGA ++ GRPW +C++ GF
Sbjct: 7 YCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHNGEIVGGASKTKHGRPWSISCLVYGF 64
>sp|Q4PDF6|SLX1_USTMA Structure-specific endonuclease subunit SLX1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=SLX1 PE=3 SV=1
Length = 658
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
++ Y + S + P TY+G+T PRR +QHNG L GA + RPW CI+ GF
Sbjct: 14 YACYFLRSLSTPGTTYIGSTPAPPRRKRQHNGHLTQGAYKTSRARPWEMECIVYGF 69
>sp|A6RYJ8|SLX1_BOTFB Structure-specific endonuclease subunit slx1 OS=Botryotinia
fuckeliana (strain B05.10) GN=slx1 PE=3 SV=2
Length = 425
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
+ YL+ ST YVG+T N RRL+QHNG ++GGA + G RPW ACI+ GF
Sbjct: 16 YGCYLLRSTIRHSALYVGSTPNPVRRLRQHNGLVKGGAVRTSRGNLRPWEMACIVTGF 73
>sp|A4I1H7|SLX1_LEIIN Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania
infantum GN=LinJ25.1380 PE=3 SV=1
Length = 705
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA + S+ GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCV 61
Query: 102 QGFHD 106
GF D
Sbjct: 62 SGFPD 66
>sp|Q6C0W7|SLX1_YARLI Structure-specific endonuclease subunit SLX1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SLX1 PE=3 SV=1
Length = 288
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQAG--RPWISACIIQGF 104
+ VYL+ ST P+ YVG+T N RR++QHNG+L+ GGA ++ RPW I+ GF
Sbjct: 9 YGVYLLQSTKKPLSCYVGSTPNPFRRIRQHNGDLKAGGAWRTKRAHLRPWSMVLIVNGF 67
>sp|A1C4Z4|SLX1_ASPCL Structure-specific endonuclease subunit slx1 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=slx1 PE=3 SV=1
Length = 434
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW I++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLTQHNGVVKGGARRTAAEKLRPWEMVMIVEGF 73
>sp|Q5CT62|SLX1_CRYPI Structure-specific endonuclease subunit SLX1 homolog
OS=Cryptosporidium parvum (strain Iowa II) GN=cgd2_4280
PE=3 SV=1
Length = 410
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 44 SNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQG 103
SN + Y ++S +Y+G + N RRL+QHNGE++ GAK +++G PW + G
Sbjct: 3 SNIQLHYCYFLLSEAKKKASYIGYSVNPCRRLRQHNGEIKKGAKKTKSGVPWNLGICVGG 62
Query: 104 FHDQ 107
F D+
Sbjct: 63 FPDR 66
>sp|A8PV03|SLX1_BRUMA Structure-specific endonuclease subunit SLX1 homolog OS=Brugia
malayi GN=Bm1_35165 PE=3 SV=1
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 20 SKLSSSSSSPTPIRSQSQSKR-----TPNSNSRSWSVYLIISTNP----PIKTYVGTTTN 70
SK+ SSS I+ + KR P+ + VY ++S +P + Y+G T N
Sbjct: 36 SKILCRSSSQEVIQENERKKRGKNYAVPSILDDFFGVYCLLSRSPNRYFKNRCYIGYTVN 95
Query: 71 FPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
RR++QHN G+ GGAK + PW CII GF
Sbjct: 96 PNRRIRQHNAGKEFGGAKKTDHRGPWDMVCIIHGF 130
>sp|A8PWH1|SLX1_MALGO Structure-specific endonuclease subunit SLX1 OS=Malassezia globosa
(strain ATCC MYA-4612 / CBS 7966) GN=SLX1 PE=3 SV=1
Length = 443
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 40 RTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISAC 99
RTP R + Y + S + P +TY+G+T + RRL+QHNG ++ GA ++ RPW
Sbjct: 10 RTP----RVYVCYCLRSLSRPNQTYIGSTPDPIRRLRQHNGLVKQGAFYTRMARPWTMDV 65
Query: 100 IIQGF 104
++ GF
Sbjct: 66 VVYGF 70
>sp|Q6BWW4|SLX1_DEBHA Structure-specific endonuclease subunit SLX1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SLX1 PE=3 SV=2
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGA-KASQAG-RPWISACIIQGF 104
+ VYL+ S P Y+G+T N RRL+QHNGEL+ GGA + ++G RPW C++ F
Sbjct: 24 YGVYLLRSVPKPKSFYIGSTPNPQRRLRQHNGELKNGGAYRTKKSGFRPWEMICLVYNF 82
>sp|Q2GWJ7|SLX1_CHAGB Structure-specific endonuclease subunit SLX1 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=SLX1 PE=3 SV=1
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
++VY++ ST YVG+T N PRRL QHNG +RGGA + G RPW ++ GF
Sbjct: 12 YTVYILRSTVRHASFYVGSTPNPPRRLSQHNGLVRGGAVRTSRGNLRPWEMIILVSGF 69
>sp|P0CN80|SLX1_CRYNJ Structure-specific endonuclease subunit SLX1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SLX1 PE=3 SV=1
Length = 487
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T + PRR++QHNGEL+ GA ++ RPW I+ GF
Sbjct: 44 RTYVGSTPDPPRRIRQHNGELKQGAWSTSRHRPWEMQMIVYGF 86
>sp|P0CN81|SLX1_CRYNB Structure-specific endonuclease subunit SLX1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SLX1 PE=3 SV=1
Length = 487
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 62 KTYVGTTTNFPRRLKQHNGELRGGAKASQAGRPWISACIIQGF 104
+TYVG+T + PRR++QHNGEL+ GA ++ RPW I+ GF
Sbjct: 44 RTYVGSTPDPPRRIRQHNGELKQGAWSTSRHRPWEMQMIVYGF 86
>sp|Q0UAL6|SLX1_PHANO Structure-specific endonuclease subunit SLX1 OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=SLX1 PE=3 SV=3
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-SYYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPWEMTCIVTGF 72
>sp|A7STV9|SLX1_NEMVE Structure-specific endonuclease subunit SLX1 homolog
OS=Nematostella vectensis GN=v1g174298 PE=3 SV=1
Length = 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 50 SVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGEL-RGGAKASQAGRPWISACIIQGF 104
VYL+ NP K TY+G T N RR+KQHNG + +GGA + +PW I+ GF
Sbjct: 12 GVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHGF 69
>sp|B9WGW9|SLX1_CANDC Structure-specific endonuclease subunit SLX1 OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=SLX1 PE=3 SV=1
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ VY++ S P +TY+G+T + RRL+QHNG+L+ GGA ++ RPW ++ GF
Sbjct: 17 YGVYILKSIPKPRRTYIGSTPDPKRRLRQHNGDLKVGGAYRTKKDGSRPWTMVVLVHGF 75
>sp|Q0CE14|SLX1_ASPTN Structure-specific endonuclease subunit slx1 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=slx1 PE=3 SV=1
Length = 390
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIIST-NPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQA-GRPWISACIIQGF 104
+ YL+ ST N YVG+T N PRRL QHNG +GGAK + RPW +++GF
Sbjct: 16 YCCYLLRSTVNKRAGLYVGSTPNPPRRLPQHNGLSKGGAKKTATKNRPWEMVLLVEGF 73
>sp|Q57XV5|SLX1_TRYB2 Structure-specific endonuclease subunit SLX1 homolog OS=Trypanosoma
brucei brucei (strain 927/4 GUTat10.1) GN=Tb927.3.1220
PE=3 SV=1
Length = 511
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPIKT--YVGTTTNFPRRLKQHNGELRGGAKASQA-GRPWISACII 101
++R VYL+ S +P + Y+G T N RRL+QHNGEL GA+ ++ GRPW+ +
Sbjct: 2 DTRFHCVYLLTSLDPQCEGAHYIGYTVNPIRRLRQHNGELVNGARRTKRNGRPWLLLMCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>sp|Q4D7L5|SLX11_TRYCC Structure-specific endonuclease subunit SLX1 homolog 1
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053509453.60 PE=3 SV=1
Length = 529
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T + RRL+QHNGE+ GA + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>sp|A3LZG5|SLX1_PICST Structure-specific endonuclease subunit SLX1 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=SLX1 PE=3 SV=2
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAG-RPWISACIIQGF 104
+ VYL+ S P Y+G+T + PRRL+QHNG+L+ G + +AG RPW ++ F
Sbjct: 23 YGVYLLQSEPKPSSFYIGSTPDPPRRLRQHNGDLKAGGAYRTKRAGFRPWRMLLVVYDF 81
>sp|B6QFH5|SLX1_PENMQ Structure-specific endonuclease subunit slx1 OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=slx1 PE=3 SV=1
Length = 389
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGFHD 106
+ YL+ S P Y+G+T + RRL+QHNG +GGAK ++ RPW II+GF
Sbjct: 19 YCCYLLRSVKKPSSLYIGSTPDPARRLEQHNGFTKGGAKRTERDTLRPWEMITIIEGFTS 78
Query: 107 QS 108
++
Sbjct: 79 RT 80
>sp|B6HK90|SLX1_PENCW Structure-specific endonuclease subunit slx1 OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=slx1 PE=3 SV=1
Length = 403
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG +GGAK A RPW +++GF
Sbjct: 14 YCCYLLRSTVRHASLYIGSTPNPIRRLPQHNGVAKGGAKRTARDKLRPWEMTLVVEGF 71
>sp|Q4CTY5|SLX12_TRYCC Structure-specific endonuclease subunit SLX1 homolog 2
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053511881.30 PE=3 SV=1
Length = 530
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 45 NSRSWSVYLIISTNPPI--KTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACII 101
++R VYL+ S +P + Y+G T + RRL+QHNGE+ GA + + GRPW C +
Sbjct: 2 DTRFHCVYLLTSLDPQCAGEYYIGYTVDPIRRLRQHNGEIVSGAWRTKRRGRPWELLCCV 61
Query: 102 QGF 104
GF
Sbjct: 62 SGF 64
>sp|Q9P737|SLX1_NEUCR Structure-specific endonuclease subunit slx1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=slx1 PE=3 SV=1
Length = 402
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 34 SQSQSKRTPNSNSRSWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQ--A 91
S + ++ P ++VY++ S Y+G+T + PRRL QHNG +GGA + +
Sbjct: 2 STTTTQIQPKPIPALYTVYILRSQPRHASLYIGSTPHPPRRLSQHNGLAKGGAYRTSKIS 61
Query: 92 GRPWISACIIQGF 104
RPW C++ GF
Sbjct: 62 LRPWNMVCLVSGF 74
>sp|B8MDD1|SLX1_TALSN Structure-specific endonuclease subunit slx1 OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=slx1 PE=3 SV=1
Length = 389
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKASQAG--RPWISACIIQGF 104
+ YL+ S P Y+G+T + RRL+QHNG +GGAK ++ RPW I++GF
Sbjct: 19 YCCYLLRSAKRPSALYIGSTPDPARRLEQHNGFAKGGAKRTERNTLRPWEMVAIVEGF 76
>sp|A2QUJ2|SLX1_ASPNC Structure-specific endonuclease subunit slx1 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=slx1 PE=3 SV=1
Length = 424
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T + RRL QHNGE +GGA+ A RPW +++GF
Sbjct: 16 YCCYLLRSTKQRTSLYIGSTPHPARRLAQHNGESKGGARKTAKDDKRPWEMVLLVEGF 73
>sp|Q0IH86|SLX1_XENLA Structure-specific endonuclease subunit slx1 OS=Xenopus laevis
GN=slx1a PE=2 SV=1
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQGF 104
+ VYL+ TNP K Y+G T N RR++QHN G+ +GGA + PW I+ GF
Sbjct: 9 YGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGF 67
>sp|B0Y2U0|SLX1_ASPFC Structure-specific endonuclease subunit slx1 OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=slx1 PE=3 SV=1
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW +++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEGF 73
>sp|Q4WEL6|SLX1_ASPFU Structure-specific endonuclease subunit slx1 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=slx1 PE=3 SV=1
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW +++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLIQHNGVVKGGARRTAAEKLRPWEMVLVVEGF 73
>sp|Q2UA42|SLX1_ASPOR Structure-specific endonuclease subunit slx1 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=slx1 PE=3 SV=1
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA-KASQAGRPWISACIIQGFHDQ 107
+ YL+ ST Y+G+T + RRL QHNG RGGA K + RPW I++GF +
Sbjct: 16 YCCYLLRSTVRQTSLYIGSTPHPSRRLAQHNGVSRGGARKTANDKRPWEMVLIVEGFMSR 75
Query: 108 S 108
+
Sbjct: 76 T 76
>sp|B2WM34|SLX1_PYRTR Structure-specific endonuclease subunit slx1 OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=slx1 PE=3 SV=1
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL QHNG +GGAK + Q RPW CI+ GF
Sbjct: 16 YCCYLLRSKNRK-AFYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPWEMTCIVTGF 72
>sp|A1CZX3|SLX1_NEOFI Structure-specific endonuclease subunit slx1 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=slx1 PE=3 SV=1
Length = 406
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGF 104
+ YL+ ST Y+G+T N RRL QHNG ++GGA+ A++ RPW +++GF
Sbjct: 16 YCCYLLRSTVRHASLYIGSTPNPARRLVQHNGVVKGGARRTAAEKLRPWEMLLVVEGF 73
>sp|Q5TXB2|SLX1_ANOGA Structure-specific endonuclease subunit SLX1 homolog OS=Anopheles
gambiae GN=AGAP002259 PE=3 SV=3
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNPPIK----TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQG 103
+ VYL++S +P K TY+G T + RR+KQHN GE GGA+ + PW I+ G
Sbjct: 11 YGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVHG 70
Query: 104 F 104
F
Sbjct: 71 F 71
>sp|B2B674|SLX1_PODAN Structure-specific endonuclease subunit SLX1 OS=Podospora anserina
(strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383)
GN=SLX1 PE=3 SV=1
Length = 346
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGA--KASQAGRPWISACIIQGF 104
+ VY++ ST Y+G+T N PRRL QHNG ++GGA + + RPW ++ GF
Sbjct: 12 YCVYILRSTVRHSSLYIGSTPNPPRRLSQHNGVVKGGAVRTSRNSLRPWEMVALVSGF 69
>sp|A8WJ66|SLX1_CAEBR Structure-specific endonuclease subunit SLX1 homolog
OS=Caenorhabditis briggsae GN=giyd-1 PE=3 SV=2
Length = 439
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 49 WSVYLIISTNP----PIKTYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPWISACIIQG 103
+ VY +IS + + Y+G T + RR+ QHNG +GGAK + + PW C++ G
Sbjct: 168 YGVYCLISRSERQCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVVHG 227
Query: 104 F 104
F
Sbjct: 228 F 228
>sp|C0NTM8|SLX1_AJECG Structure-specific endonuclease subunit SLX1 OS=Ajellomyces
capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC
2432) GN=SLX1 PE=3 SV=1
Length = 421
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELRGGAK--ASQAGRPWISACIIQGFHD 106
+ YL+ ST Y+G+T RRL QHNG+ GGA+ +S+ RPW I+ GF +
Sbjct: 15 YCCYLLRSTVRHASLYIGSTPEPSRRLAQHNGDRTGGARKTSSEKLRPWEMVAIVSGFTN 74
Query: 107 QS 108
++
Sbjct: 75 RA 76
>sp|P91351|SLX1_CAEEL Structure-specific endonuclease subunit SLX1 homolog
OS=Caenorhabditis elegans GN=giyd-1 PE=3 SV=1
Length = 443
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 49 WSVYLIIS-TNPPI---KTYVGTTTNFPRRLKQHNG-ELRGGAKASQAGRPWISACIIQG 103
+ VY +IS ++ P + Y+G T + RR+ QHNG +GGAK + + PW C++ G
Sbjct: 173 YGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRDKGGAKKTDSRGPWDMVCVVHG 232
Query: 104 F 104
F
Sbjct: 233 F 233
>sp|A7TTE6|SLX1_VANPO Structure-specific endonuclease subunit SLX1 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=SLX1 PE=3
SV=1
Length = 319
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKAS--QAGRPWISACIIQGF 104
+ YL+ S N Y+G+T N RRL+QHNG L GGA + + RPW ++ GF
Sbjct: 22 YCCYLLQSINKKQSFYIGSTPNPVRRLRQHNGNLSNGGAYRTKREGTRPWEMVLVVYGF 80
>sp|P38324|SLX1_YEAST Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SLX1 PE=1
SV=1
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>sp|B5VEH8|SLX1_YEAS6 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=SLX1 PE=3 SV=1
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>sp|B3LMT5|SLX1_YEAS1 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=SLX1 PE=3 SV=1
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>sp|A6ZLG6|SLX1_YEAS7 Structure-specific endonuclease subunit SLX1 OS=Saccharomyces
cerevisiae (strain YJM789) GN=SLX1 PE=3 SV=1
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGELR-GGAKASQ--AGRPWISACIIQGF 104
+ YL+ S N YVG+T N RRL+QHNG+L GGA ++ RPW I++GF
Sbjct: 14 YCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGF 72
>sp|Q9BQ83|SLX1_HUMAN Structure-specific endonuclease subunit SLX1 OS=Homo sapiens
GN=SLX1A PE=1 SV=1
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHNGELRGGAKASQAGR-PWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHNG + G +GR PW ++
Sbjct: 11 GRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVH 70
Query: 103 GF 104
GF
Sbjct: 71 GF 72
>sp|B4I3R2|SLX1_DROSE Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
sechellia GN=slx1 PE=3 SV=2
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 28 SPTPIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GEL 82
S P + SQ + T + VYL+ S +P K YVG T N RR++QHN G
Sbjct: 3 SYDPQDTGSQQEETVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCD 62
Query: 83 RGGAKASQAGRPWISACIIQGF 104
GGA+ + PW+ I+ GF
Sbjct: 63 FGGARKTSRKGPWLMVMIVHGF 84
>sp|Q6FML9|SLX1_CANGA Structure-specific endonuclease subunit SLX1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SLX1 PE=3 SV=1
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQGF 104
+ YL+ S + Y+G+T N RRL+QHNG L RGGA ++ RPW I+ GF
Sbjct: 11 YGCYLLQSISKRQSFYIGSTPNPVRRLRQHNGSLSRGGAYRTKRDGTRPWEMVAIVYGF 69
>sp|Q5UPY6|YL300_MIMIV Uncharacterized protein L300 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L300 PE=4 SV=1
Length = 166
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 48 SWSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGE--LRGGAKASQAGRPWISACIIQGFH 105
+W YLI+S + +TY+G+T N RRL HN R GAK ++ GR WI I GF
Sbjct: 3 NWVCYLIMSLDSK-ETYIGSTNNRQRRLNDHNNLNPSRKGAKRTR-GRTWIPILYISGFE 60
Query: 106 DQS 108
+++
Sbjct: 61 NKN 63
>sp|Q6CKL8|SLX1_KLULA Structure-specific endonuclease subunit SLX1 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SLX1 PE=3 SV=1
Length = 288
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 49 WSVYLIISTNPPIKTYVGTTTNFPRRLKQHNGEL-RGGAKASQ--AGRPWISACIIQGF 104
+ YL+ S P Y+G++ + RRL+QHNG + RGGA ++ RPW C I GF
Sbjct: 12 YCSYLLRSIPKPNSFYIGSSPDPVRRLRQHNGAVRRGGAYRTKRNGTRPWKMVCFIYGF 70
>sp|Q8BX32|SLX1_MOUSE Structure-specific endonuclease subunit SLX1 OS=Mus musculus
GN=Slx1b PE=2 SV=1
Length = 270
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 46 SRSWSVYLIISTNPPIK--TYVGTTTNFPRRLKQHN-GELRGGAKASQAGRPWISACIIQ 102
R + VYL+ NP + YVG T N RR++QHN G +GGA + PW II
Sbjct: 8 GRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIH 67
Query: 103 GF 104
GF
Sbjct: 68 GF 69
>sp|Q9VN41|SLX1_DROME Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila
melanogaster GN=slx1 PE=1 SV=3
Length = 297
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 28 SPTPIRSQSQSKRTPNSNSRSWSVYLIIS--TNPPI--KTYVGTTTNFPRRLKQHN-GEL 82
S P + SQ + + + VYL+ S +P K YVG T N RR++QHN G
Sbjct: 3 SYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHNLGCD 62
Query: 83 RGGAKASQAGRPWISACIIQGF 104
GGA+ + PW+ I+ GF
Sbjct: 63 FGGARKTSRKGPWLMVMIVHGF 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,191,762
Number of Sequences: 539616
Number of extensions: 1552279
Number of successful extensions: 8368
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 7916
Number of HSP's gapped (non-prelim): 413
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)