BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047367
(579 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 144/287 (50%), Gaps = 50/287 (17%)
Query: 295 FSYKQLQKATHNFSKENLLGKG-----------------------------EREYLAEIC 325
FS ++LQ A+ NFS +N+LG+G E ++ E+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----GKGFLDWKTRYKILTG 380
I H+NL++LRG+C LLVY YMANGS+ + + LDW R +I G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 381 LASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ-NDACVTTMMAGTP 429
A L YLH+ CD I+H E+ A +GD GLA+L+ D V + GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 430 GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLF-----EENSLVDYVWSLYGKN 484
G++APE +GK++ + DV+ +G++ LE+ G+R+ L ++ L+D+V L +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 485 ALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQIF 531
L VD L+G + +E+V++ + V M RPK+ +VV++
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 142/287 (49%), Gaps = 50/287 (17%)
Query: 295 FSYKQLQKATHNFSKENLLGKG-----------------------------EREYLAEIC 325
FS ++LQ A+ NF +N+LG+G E ++ E+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----GKGFLDWKTRYKILTG 380
I H+NL++LRG+C LLVY YMANGS+ + + LDW R +I G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 381 LASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ-NDACVTTMMAGTP 429
A L YLH+ CD I+H E+ A +GD GLA+L+ D V + G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 430 GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLF-----EENSLVDYVWSLYGKN 484
G++APE +GK++ + DV+ +G++ LE+ G+R+ L ++ L+D+V L +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 485 ALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQIF 531
L VD L+G + +E+V++ + V M RPK+ +VV++
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 17/230 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS----LDLFIGKGFLDWK 372
++++ EI + + +H+NLV+L G+ + + L LVY YM NGS L G L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 373 TRYKILTGLASALLYLHEEC-------DKPIVHHSEYNARLGDLGLARLIQNDA--CVTT 423
R KI G A+ + +LHE I+ + A++ D GLAR + A + +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV--DYVWSLY 481
+ GT Y+APE + G+ TP+ D+YSFG+V LE+ G + E L+
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 482 GKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQIF 531
+ + + +DK++ + D V+ +V LH RP I+KV Q+
Sbjct: 253 EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS----LDLFIGKGFLDWK 372
++++ EI + + +H+NLV+L G+ + + L LVY YM NGS L G L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 373 TRYKILTGLASALLYLHEEC-------DKPIVHHSEYNARLGDLGLARLIQNDA--CVTT 423
R KI G A+ + +LHE I+ + A++ D GLAR + A +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV--DYVWSLY 481
+ GT Y+APE + G+ TP+ D+YSFG+V LE+ G + E L+
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 482 GKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQIF 531
+ + + +DK++ + D V+ +V LH RP I+KV Q+
Sbjct: 253 EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS----LDLFIGKGFLDWK 372
++++ EI + + +H+NLV+L G+ + + L LVY YM NGS L G L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 373 TRYKILTGLASALLYLHEEC-------DKPIVHHSEYNARLGDLGLARLIQNDA--CVTT 423
R KI G A+ + +LHE I+ + A++ D GLAR + A +
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV--DYVWSLY 481
+ GT Y+APE + G+ TP+ D+YSFG+V LE+ G + E L+
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 246
Query: 482 GKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQIF 531
+ + + +DK++ + D V+ +V LH RP I+KV Q+
Sbjct: 247 EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS----LDLFIGKGFLDWK 372
++++ EI + +H+NLV+L G+ + + L LVY Y NGS L G L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 373 TRYKILTGLASALLYLHEEC-------DKPIVHHSEYNARLGDLGLARLIQNDA--CVTT 423
R KI G A+ + +LHE I+ + A++ D GLAR + A +
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV--DYVWSLY 481
+ GT Y APE + G+ TP+ D+YSFG+V LE+ G + E L+
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 243
Query: 482 GKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQIF 531
+ + + +DK+ + D V+ +V LH RP I+KV Q+
Sbjct: 244 EEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 103/241 (42%), Gaps = 51/241 (21%)
Query: 28 TFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
+F NFN S I G T +G L LT + +P P + +GR + P+ +
Sbjct: 7 SFKNFNSPS------FILQGDATVSSGKLQLTKVKENGIPTP-SSLGRAFYSSPIQIYDK 59
Query: 87 -----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGV 141
A + T+FTV+IS P DG+AF + P NG YLG+ D +
Sbjct: 60 STGAVASWATSFTVKISA-PSKASFADGIAFALVPVGSEPRRNG--GYLGVFDSDVYNNS 116
Query: 142 VRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDG 201
+ +AVE DT N P HIG+D S+ KS+ + DL +G N + I Y+
Sbjct: 117 AQTVAVEFDTLSNSGWDPSMKHIGIDVNSI------KSIATVSWDLANGENAEILITYNA 170
Query: 202 AKT--------------------------VPNAVYVGFTASTGLLQ---ESHQLLDRVFV 232
A + +P V VGF+A+TGL + E+H +L F
Sbjct: 171 ATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFA 230
Query: 233 S 233
S
Sbjct: 231 S 231
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG----FLDWKTR 374
E+L E+ + RLRH N+V G + +L +V EY++ GSL + K LD + R
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ +A + YLH + PIVH +Y ++ D GL+RL + +
Sbjct: 140 LSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 425 MAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLYGKN 484
AGTP ++APEV + + DVYSFG++ E+A ++ G +V V +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258
Query: 485 ALLECVDKQ----LEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVV 528
+ ++ Q +EG + E KR FA++ +LRP I+ V
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKRP---SFATIMD--LLRPLIKSAV 301
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 24/228 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG----FLDWKTR 374
E+L E+ + RLRH N+V G + +L +V EY++ GSL + K LD + R
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 375 YKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTM 424
+ +A + YLH + PIVH + +Y ++ D GL+RL + +
Sbjct: 140 LSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 425 MAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLYGKN 484
AGTP ++APEV + + DVYSFG++ E+A ++ G +V V +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258
Query: 485 ALLECVDKQ----LEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVV 528
+ ++ Q +EG + E KR FA++ +LRP I+ V
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKRP---SFATIMD--LLRPLIKSAV 301
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 51/241 (21%)
Query: 28 TFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
+F NFN S I G T + L LT + LP L+ +GR + P+ +
Sbjct: 7 SFKNFNSSS------FILQGDATVSSSKLRLTKVKGNGLPT-LSSLGRAFYSSPIQIYDK 59
Query: 87 -----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGV 141
A + T+FT I P+ + S DG+AF + P N +LG+ D D
Sbjct: 60 STGAVASWATSFTANIFA-PNKSSSADGIAFALVPVGSEPKSNS--GFLGVFDSDVYDNS 116
Query: 142 VRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDG 201
+ +AVE DT+ N P HIG+D S+ KS+ + L +G+N + I Y+
Sbjct: 117 AQTVAVEFDTFSNTDWDPTSRHIGIDVNSI------KSIRTASWGLANGQNAEILITYNA 170
Query: 202 AKT--------------------------VPNAVYVGFTASTGLLQ---ESHQLLDRVFV 232
A + +P V +GF+A+TGL + E+H +L F
Sbjct: 171 ATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFA 230
Query: 233 S 233
S
Sbjct: 231 S 231
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-GKGF----LDWKTRYKILTGLASAL 385
RH +LV L G+C ER ++L+Y+YM NG+L + G + W+ R +I G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 386 LYLHEECDKPIVHH----------SEYNARLGDLGLAR--LIQNDACVTTMMAGTPGYLA 433
YLH + I+H + ++ D G+++ + + ++ GT GY+
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 434 PEVSFSGKATPEFDVYSFGMVALEVACGR 462
PE G+ T + DVYSFG+V EV C R
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-GKGF----LDWKTRYKILTGLASAL 385
RH +LV L G+C ER ++L+Y+YM NG+L + G + W+ R +I G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 386 LYLHEECDKPIVHH----------SEYNARLGDLGLAR--LIQNDACVTTMMAGTPGYLA 433
YLH + I+H + ++ D G+++ + ++ GT GY+
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 434 PEVSFSGKATPEFDVYSFGMVALEVACGR 462
PE G+ T + DVYSFG+V EV C R
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 22/196 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICM--GSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQP 81
++ +F+ F P GND + + S+ +G L LT + +P + GR L+ +P
Sbjct: 3 TISFSFSEFEP-----GNDNLTLQGASLITQSGVLQLTKINQNGMPA-WDSTGRTLYAKP 56
Query: 82 VLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDK 135
V W A F T F+ I + DG+ F M K P GYG YLGI +
Sbjct: 57 VHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMG-PTKSKPAQGYG-YLGIFNN 114
Query: 136 STQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
S QD + L VE DT+ N++ P HIG+D S+ +S+ + L +G+ V
Sbjct: 115 SKQDNSYQTLGVEFDTFSNQWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANV 168
Query: 196 KIDYDGAKTVPNAVYV 211
I YD + + +AV V
Sbjct: 169 VIKYDASSKLLHAVLV 184
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 51/244 (20%)
Query: 25 VPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLA 84
+ TF FN +LI T +G L +T + +P +GR + P+
Sbjct: 27 ISFTFKKFNE------TNLILQRDATVSSGKLRITKAAENGVPTA-GSLGRAFYSTPIQI 79
Query: 85 WP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQ 138
W A + T+FT + + P+A DG+AF + P G +LG+ D
Sbjct: 80 WDNTTGTVASWATSFTFNL-QAPNAASPADGLAFALVPVGSQPKDKG--GFLGLFDSKNY 136
Query: 139 DGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKID 198
+ +AVE DT+ N P HIG+D S+ KS+ +T D +G N V I
Sbjct: 137 ASSNQTVAVEFDTFYNGGWDPTERHIGIDVNSI------KSIKTTSWDFANGENAEVLIT 190
Query: 199 YDGA--------------------------KTVPNAVYVGFTASTGLLQ---ESHQLLDR 229
YD + +P V VGF+A+TGL + E++++L
Sbjct: 191 YDSSTNLLVASLVHPSQKTSFIVSERVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLSW 250
Query: 230 VFVS 233
F S
Sbjct: 251 SFAS 254
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGS-VTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
++ +F+ F P NDL G+ + +G L LT + +P + GR L+ +PV
Sbjct: 3 TISFSFSEFEP----GNNDLTLQGAAIITQSGVLQLTKINQNGMPA-WDSTGRTLYTKPV 57
Query: 83 LAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKS 136
W A F T F+ I + DG+ F M K P GYG YLG+ + S
Sbjct: 58 HIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGP-TKSKPAQGYG-YLGVFNNS 115
Query: 137 TQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVK 196
QD + LAVE DT+ N + P HIG+D S+ +S+ + L +G+ V
Sbjct: 116 KQDNSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANVV 169
Query: 197 IDYDGAKTVPNAVYVGFTASTGLLQESHQLLD 228
I YD + + AV V S+G + +++D
Sbjct: 170 IKYDASSKILLAVLV--YPSSGAIYTIAEIVD 199
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 22/196 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICM--GSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQP 81
++ +F+ F P GND + + S+ +G L LT + +P + GR L+ +P
Sbjct: 3 TISFSFSEFEP-----GNDNLTLQGASLITQSGVLQLTKINQNGMPA-WDSTGRTLYAKP 56
Query: 82 VLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDK 135
V W A F T F+ I + DG+ F M K P GYG YLGI ++
Sbjct: 57 VHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMG-PTKSKPAQGYG-YLGIFNQ 114
Query: 136 STQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
S QD + L VE DT+ N + P HIG+D S+ +S+ + L +G+ V
Sbjct: 115 SKQDNSYQTLGVEFDTFSNPWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANV 168
Query: 196 KIDYDGAKTVPNAVYV 211
I YD + + +AV V
Sbjct: 169 VIKYDASSKLLHAVLV 184
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICM--GSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQP 81
++ +F+ F P GND + + ++ +G L LT + +P + GR L+ +P
Sbjct: 3 TISFSFSEFEP-----GNDNLTLQGAALITQSGVLQLTKINQNGMPA-WDSTGRTLYAKP 56
Query: 82 VLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDK 135
V W A F T F+ I + DG+ F M K P GYG YLGI +
Sbjct: 57 VHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMG-PTKSKPAQGYG-YLGIFNN 114
Query: 136 STQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
S QD + L VE DT+ N + P HIG+D S+ +S+ + L +G+ V
Sbjct: 115 SKQDNSYQTLGVEFDTFSNPWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANV 168
Query: 196 KIDYDGAKTVPNAVYVGFTASTGLLQESHQLLD 228
I YD + + +AV V S+G + +++D
Sbjct: 169 VIKYDASSKILHAVLV--YPSSGAIYTIAEIVD 199
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICM--GSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQP 81
++ +F+ F P GND + + ++ +G L LT + +P + GR L+ +P
Sbjct: 3 TISFSFSEFEP-----GNDNLTLQGAALITQSGVLQLTKINQNGMPA-WDSTGRTLYAKP 56
Query: 82 VLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDK 135
V W A F T F+ I + DG+ F M K P GYG YLGI +
Sbjct: 57 VHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGP-TKSKPAQGYG-YLGIFNN 114
Query: 136 STQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
S QD + L VE DT+ N + P HIG+D S+ +S+ + L +G+ V
Sbjct: 115 SKQDNSYQTLGVEFDTFSNPWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANV 168
Query: 196 KIDYDGAKTVPNAVYVGFTASTGLLQESHQLLD 228
I YD + + +AV V S+G + +++D
Sbjct: 169 VIKYDASSKILHAVLV--YPSSGAIYTIAEIVD 199
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICM--GSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQP 81
++ +F+ F P GND + + S+ +G L LT + +P + GR L+ +P
Sbjct: 3 TISFSFSEFEP-----GNDNLTLQGASLITQSGVLQLTKINQNGMPA-WDSTGRTLYAKP 56
Query: 82 VLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDK 135
V W A F T F+ I + DG+ F M K P G G YLGI +
Sbjct: 57 VHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGP-TKSKPAQG-GGYLGIFNN 114
Query: 136 STQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
S QD + L VE DT+ N++ P HIG+D S+ +S+ + L +G+ V
Sbjct: 115 SKQDNSYQTLGVEFDTFSNQWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANV 168
Query: 196 KIDYDGAKTVPNAVYV 211
I YD + + +AV V
Sbjct: 169 VIKYDASSKILHAVLV 184
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 99/242 (40%), Gaps = 61/242 (25%)
Query: 32 FNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP----- 86
F+PD N LI G +GY T E + N VGR L+ P+ W
Sbjct: 11 FSPDQQN----LIFQG-----DGYT--TKEKLTLTKAVKNTVGRALYSSPIHIWDRETGN 59
Query: 87 -AMFTTTFTVRISKFPDATGSGDGMAFVMA-QDNKPPPPNGYGSYLGIMDKSTQDGVVRQ 144
A F T+FT I+ P++ DG F +A D KP G YLG+ + + D +
Sbjct: 60 VANFVTSFTFVINA-PNSYNVADGFTFFIAPVDTKPQTG---GGYLGVFNSAEYDKTTQT 115
Query: 145 LAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGA 202
+AVE DT+ N P HIG+D S+ KS+N+ L++G V I ++ A
Sbjct: 116 VAVEFDTFYNAAWDPSNRDRHIGIDVNSI------KSVNTKSWKLQNGEEANVVIAFNAA 169
Query: 203 K-------------------------------TVPNAVYVGFTASTGLLQESHQLLDRVF 231
VP V +GF+A+TG +H++L F
Sbjct: 170 TNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSF 229
Query: 232 VS 233
S
Sbjct: 230 HS 231
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICM--GSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQP 81
++ +F+ F P GND + + ++ +G L LT + +P + GR L+ +P
Sbjct: 3 TISFSFSEFEP-----GNDNLTLQGAALITQSGVLQLTKINQNGMPA-WDSTGRTLYTKP 56
Query: 82 VLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDK 135
V W A F T F+ I + DG+ F M K P GYG YLG+ +
Sbjct: 57 VHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGP-TKSKPAQGYG-YLGVFNN 114
Query: 136 STQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
S QD + LAVE DT+ N + P HIG+D S+ +S+ + L +G+ V
Sbjct: 115 SKQDNSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSI------RSIKTQPFQLDNGQVANV 168
Query: 196 KIDYDGAKTVPNAVYVGFTASTGLLQESHQLLD 228
I YD + + V V S+G + +++D
Sbjct: 169 VIKYDAPSKILHVVLV--YPSSGAIYTIAEIVD 199
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 103/244 (42%), Gaps = 51/244 (20%)
Query: 27 ITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAW 85
TF+ F P+ N L G T +G L LT + +P P +GR L+ P+ W
Sbjct: 7 FTFSKFKPNQPN----LKKQGDATVTSSGTLQLTKVDKNGVPDP-KSLGRALYASPINIW 61
Query: 86 P------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQD 139
A F T+F I P+ DG+AF +A + PP G G +LG+ D + +
Sbjct: 62 DSKTGVVASFATSFRFTIYA-PNIATIADGLAFFLAPVSSPPKA-GAG-FLGLFDSAVFN 118
Query: 140 GVVRQLAVELDTYMNE-YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKID 198
+ +AVE DTY N ++ P HIG+D S+ KS+ + DL +G V I
Sbjct: 119 SSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSI------KSIKTVKWDLANGEAAKVLIT 172
Query: 199 YDGA--------------------------KTVPNAVYVGFTASTGLLQ---ESHQLLDR 229
YD + +P V +GF+A+TG E+H +
Sbjct: 173 YDSSAKLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSW 232
Query: 230 VFVS 233
F S
Sbjct: 233 SFAS 236
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 103/244 (42%), Gaps = 51/244 (20%)
Query: 27 ITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAW 85
TF+ F P+ N L G T +G L LT + +P P +GR L+ P+ W
Sbjct: 7 FTFSKFKPNQPN----LKKQGDATVTSSGTLQLTKVDKNGVPDP-KSLGRALYASPINIW 61
Query: 86 P------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQD 139
A F T+F I P+ DG+AF +A + PP G G +LG+ D + +
Sbjct: 62 DSKTGVVASFATSFRFTIYA-PNIATIADGLAFFLAPVSSPPKA-GAG-FLGLFDSAVFN 118
Query: 140 GVVRQLAVELDTYMNE-YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKID 198
+ +AVE DTY N ++ P HIG+D S+ KS+ + DL +G V I
Sbjct: 119 SSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSI------KSIKTVKWDLANGEAAKVLIT 172
Query: 199 YDGA--------------------------KTVPNAVYVGFTASTGLLQ---ESHQLLDR 229
YD + +P V +GF+A+TG E+H +
Sbjct: 173 YDSSAKLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSW 232
Query: 230 VFVS 233
F S
Sbjct: 233 SFAS 236
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GLAR++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 44/246 (17%)
Query: 32 FNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP----- 86
FN N N ++ + + +G L LT P + +GR + P+ W
Sbjct: 6 FNFQRFNETNLILQRDASVSSSGQLRLT-NLNGNGEPRVGSLGRAFYSAPIQIWDNTTGT 64
Query: 87 -AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQL 145
A F T+FT I + P+ G DG+AF + P G +LG+ D S + +
Sbjct: 65 VASFATSFTFNI-QVPNNAGPADGLAFALVPVGSQPKDKG--GFLGLFDGSNSN--FHTV 119
Query: 146 AVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGA--- 202
AVE DT N+ P HIG+D S+ +S+ +T D +G N V I YD +
Sbjct: 120 AVEFDTLYNKDWDPTERHIGIDVNSI------RSIKTTRWDFVNGENAEVLITYDSSTNL 173
Query: 203 -----------------------KTVPNAVYVGFTASTGLLQESHQLLDRVFVSFPIEFD 239
+P V VGF+A+TG+ + + + D + SF +
Sbjct: 174 LVASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASKLS 233
Query: 240 EKGQSK 245
++ S+
Sbjct: 234 DETTSE 239
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 32 FNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP----- 86
FN N N ++ + + +G L LT P + +GR + P+ W
Sbjct: 6 FNFQRFNETNLILQRDASVSSSGQLRLT-NLNGNGEPRVGSLGRAFYSAPIQIWDNTTGT 64
Query: 87 -AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQL 145
A F T+FT I + P+ G DG+AF + P G +LG+ D S + +
Sbjct: 65 VASFATSFTFNI-QVPNNAGPADGLAFALVPVGSQPKDKG--GFLGLFDGSNSN--FHTV 119
Query: 146 AVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGA--- 202
AVE DT N+ P HIG+D S+ +S+ +T D +G N V I YD +
Sbjct: 120 AVEFDTLYNKDWDPTERHIGIDVNSI------RSIKTTRWDFVNGENAEVLITYDSSTNL 173
Query: 203 -----------------------KTVPNAVYVGFTASTGLLQ---ESHQLLDRVFVS 233
+P V VGF+A+TG+ + E++ +L F S
Sbjct: 174 LVASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFAS 230
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L E +G+ H N++ L G + + +++V EYM NGSLD F+ K G
Sbjct: 65 KQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI 124
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+++ + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
P + APE K T DV+S+G+V EV
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 86 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 145
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 69.3 bits (168), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
+ + F PD N + G+GY T E + N VGR L+ P+
Sbjct: 3 TTSFSITKFGPDQPN---------LIFQGDGYT--TKERLTLTKAVRNTVGRALYSSPIH 51
Query: 84 AWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKST 137
W A F T+FT I P++ DG F +A + P G YLG+ +
Sbjct: 52 IWDSKTGNVANFVTSFTFVIDA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSKD 108
Query: 138 QDGVVRQLAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
D + +AVE DT+ N P HIG+D S+ KS+N+ L++G+ V
Sbjct: 109 YDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSI------KSINTKSWKLQNGKEANV 162
Query: 196 KIDYDGAKTV 205
I ++GA V
Sbjct: 163 VIAFNGATNV 172
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L+E +G+ H N++ L G + + ++++ EYM NGSLD F+ K G
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 131
Query: 373 TRYKILTGLASALLYL-------HEECDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+ S + YL + + I+ +S ++ D G++R++++D A TT
Sbjct: 132 QLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K T DV+S+G+V EV
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|2LAL|C Chain C, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|1LEM|A Chain A, The Monosaccharide Binding Site Of Lentil Lectin: An X-Ray
And Molecular Modelling Study
pdb|1LEN|A Chain A, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LEN|C Chain C, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LES|A Chain A, Lentil Lectin Complexed With Sucrose
pdb|1LES|C Chain C, Lentil Lectin Complexed With Sucrose
Length = 181
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
+ + F+PD N LI G G L+LT ST VGR L+ P+
Sbjct: 3 TTSFSITKFSPDQQN----LIFQGDGYTTKGKLTLTKAVKST-------VGRALYSTPIH 51
Query: 84 AWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKST 137
W A F T+FT I P + DG F +A + P G YLG+ +
Sbjct: 52 IWDRDTGNVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSKE 108
Query: 138 QDGVVRQLAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
D + +AVE DT+ N P HIG+D S+ KS+N+ +L++G V
Sbjct: 109 YDKTSQTVAVEFDTFYNAAWDPSNKERHIGIDVNSI------KSVNTKSWNLQNGERANV 162
Query: 196 KIDYDGAKTV 205
I ++ A V
Sbjct: 163 VIAFNAATNV 172
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V EYM NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
+ + F PD N + G+GY T E + N VGR L+ P+
Sbjct: 3 TTSFSITKFGPDQPN---------LIFQGDGYT--TKERLTLTKAVRNTVGRALYSSPIH 51
Query: 84 AWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKST 137
W A F T+FT I P++ DG F +A + P G YLG+ +
Sbjct: 52 IWDSKTGNVANFVTSFTFVIDA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSKD 108
Query: 138 QDGVVRQLAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
D + +AVE DT+ N P HIG+D S+ KS+N+ L++G+ V
Sbjct: 109 YDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSI------KSINTKSWALQNGKEANV 162
Query: 196 KIDYDGAKTV 205
I ++GA V
Sbjct: 163 VIAFNGATNV 172
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex
pdb|1OFS|C Chain C, Pea Lectin-sucrose Complex
Length = 187
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 32 FNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP----- 86
F+PD N + G+GY T E + N VGR L+ P+ W
Sbjct: 11 FSPDQQN---------LIFQGDGYT--TKEKLTLTKAVKNTVGRALYSSPIHIWDRETGN 59
Query: 87 -AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQL 145
A F T+FT I+ P++ DG F +A + P G YLG+ + + D + +
Sbjct: 60 VANFVTSFTFVINA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSAEYDKTTQTV 116
Query: 146 AVELDTYMNEYMIPDG--NHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGAK 203
AVE DT+ N P HIG+D S+ KS+N+ L++G V I ++ A
Sbjct: 117 AVEFDTFYNAAWDPSNRDRHIGIDVNSI------KSVNTKSWKLQNGEEANVVIAFNAAT 170
Query: 204 TVPNAVYVGFTASTGLLQES 223
N + V T L +E+
Sbjct: 171 ---NVLTVSLTYPNSLEEEN 187
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L+E +G+ H N++ L G + + ++++ EYM NGSLD F+ K G
Sbjct: 57 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 116
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+ S + YL H + + I+ +S ++ D G++R++++D A TT
Sbjct: 117 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K T DV+S+G+V EV
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L+E +G+ H N++ L G + + ++++ EYM NGSLD F+ K G
Sbjct: 51 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 110
Query: 373 TRYKILTGLASALLYL-------HEECDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+ S + YL + + I+ +S ++ D G++R++++D A TT
Sbjct: 111 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K T DV+S+G+V EV
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|C Chain C, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1BQP|A Chain A, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|C Chain C, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1HKD|A Chain A, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|C Chain C, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 181
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 32 FNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP----- 86
F+PD N + G+GY T E + N VGR L+ P+ W
Sbjct: 11 FSPDQQN---------LIFQGDGYT--TKEKLTLTKAVKNTVGRALYSSPIHIWDRETGN 59
Query: 87 -AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQL 145
A F T+FT I+ P++ DG F +A + P G YLG+ + + D + +
Sbjct: 60 VANFVTSFTFVINA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSAEYDKTTQTV 116
Query: 146 AVELDTYMNEYMIPDG--NHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGAK 203
AVE DT+ N P HIG+D S+ KS+N+ L++G V I ++ A
Sbjct: 117 AVEFDTFYNAAWDPSNRDRHIGIDVNSI------KSVNTKSWKLQNGEEANVVIAFNAAT 170
Query: 204 TV 205
V
Sbjct: 171 NV 172
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 40/243 (16%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L E +G+ H N+V L G + +++V E+M NG+LD F+ K G
Sbjct: 86 KQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI 145
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+A+ + YL H + + I+ +S ++ D GL+R+I++D A TT
Sbjct: 146 QLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV-ACGRRSKGLFEENSLVDYVWSLY 481
P + APE K T DV+S+G+V EV + G R ++ + Y
Sbjct: 206 TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 265
Query: 482 GKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCML-----RPKIRKVVQIF----L 532
A ++C G L DC RPK ++V I
Sbjct: 266 RLPAPMDC------------------PAGLHQLMLDCWQKERAERPKFEQIVGILDKMIR 307
Query: 533 NPN 535
NPN
Sbjct: 308 NPN 310
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 106/246 (43%), Gaps = 52/246 (21%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
SV TF +F DLI G + G N L LT + S P VGR L+ P+
Sbjct: 3 SVCFTFTDFESGQ----QDLIFQGDASVGSNKALQLT-KVDSKGNPQGGSVGRALYTAPI 57
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKS- 136
W A F TTFT IS+ ++ D + F +A + P G LG+ S
Sbjct: 58 RLWQSSSLVASFETTFTFSISQ--GSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSN 115
Query: 137 ---TQDGVVRQLAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRN 192
+ +GVV +VE DTY N + P+ HIG+D S+ + A+K D ++G+
Sbjct: 116 NAGSDNGVV---SVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASK------WDWQNGKT 166
Query: 193 ITVKIDYDGAK-------TVPNA------------------VYVGFTASTGLLQESHQLL 227
T I Y+ A + PN+ V VGF+A+TG +++ +L
Sbjct: 167 ATAHISYNSASKRLSVVSSYPNSSPVVVSFDVELNNVXPXWVRVGFSATTGQYTQTNNIL 226
Query: 228 DRVFVS 233
F S
Sbjct: 227 AWSFRS 232
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|C Chain C, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 180
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 32 FNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP----- 86
F+PD N + G+GY T E + N VGR L+ P+ W
Sbjct: 11 FSPDQQN---------LIFQGDGYT--TKEKLTLTKAVKNTVGRALYSSPIHIWDRETGN 59
Query: 87 -AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQL 145
A F T+FT I+ P++ DG F +A + P G YLG+ + + D +
Sbjct: 60 VANFVTSFTFVINA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSAEYDKTTETV 116
Query: 146 AVELDTYMNEYMIPDG--NHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGAK 203
AVE DT+ N P HIG+D S+ KS+N+ L++G V I ++ A
Sbjct: 117 AVEFDTFYNAAWDPSNRDRHIGIDVNSI------KSVNTKSWKLQNGEEANVVIAFNAAT 170
Query: 204 TV 205
V
Sbjct: 171 NV 172
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 181
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
+ + F PD N + G+GY T E + N VGR L+ P+
Sbjct: 3 TTSFSITKFGPDQQN---------LIFQGDGYT--TKERLTLTKAVRNTVGRALYSSPIH 51
Query: 84 AWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKST 137
W A F T+FT I P++ DG F +A + P G YLG+ +
Sbjct: 52 IWDSKTGNVANFVTSFTFVIDA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSKD 108
Query: 138 QDGVVRQLAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
D + +AVE DT+ N P HIG+D S+ KS+N+ L++G+ V
Sbjct: 109 YDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSI------KSINTKSWKLQNGKEANV 162
Query: 196 KIDYDGAKTV 205
I ++ A V
Sbjct: 163 VIAFNAATNV 172
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|A Chain A, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|C Chain C, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|A Chain A, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|A Chain A, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|C Chain C, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 181
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
+ + F PD N + G+GY T E + N VGR L+ P+
Sbjct: 3 TTSFSITKFGPDQQN---------LIFQGDGYT--TKERLTLTKAVRNTVGRALYSSPIH 51
Query: 84 AWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKST 137
W A F T+FT I P++ DG F +A + P G YLG+ +
Sbjct: 52 IWDSKTGNVANFVTSFTFVIDA-PNSYNVADGFTFFIAPVDTKPQTGG--GYLGVFNSKD 108
Query: 138 QDGVVRQLAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGRNITV 195
D + +AVE DT+ N P HIG+D S+ KS+N+ L++G+ V
Sbjct: 109 YDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSI------KSINTKSWALQNGKEANV 162
Query: 196 KIDYDGAKTV 205
I ++ A V
Sbjct: 163 VIAFNAATNV 172
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 103/237 (43%), Gaps = 55/237 (23%)
Query: 21 QPVSVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSL-TPEPYSTLPPPLNKVGRVLFH 79
Q SV TF NF D ++ +I G G L L Y T P GR L+
Sbjct: 1 QSDSVSFTFPNFWSDVEDS---IIFQGDANTTAGTLQLCKTNQYGT--PLQWSAGRALYS 55
Query: 80 QPVLAWP------AMFTTTFTVRISKFPDATGSG--DGMAFVMAQDNKPPPPN--GYGSY 129
PV W A F T FT F TG+G DG+AF +A PP + G Y
Sbjct: 56 DPVQLWDNKTESVASFYTEFTF----FLKITGNGPADGLAFFLA----PPDSDVKDAGEY 107
Query: 130 LGIMDKST--QDGVVRQLAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTGID 186
LG+ +KST Q + +AVE DT+ N + P HIG++ S+ + VA K + D
Sbjct: 108 LGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVS-VATKRWEDS--D 164
Query: 187 LKSGRNITVKIDYDGA-------------------------KTVPNAVYVGFTASTG 218
+ SG+ T +I YDG+ + +P +V VG +ASTG
Sbjct: 165 IFSGKIATARISYDGSAEILTVVLSYPDGSDYILSHSVDMRQNLPESVRVGISASTG 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V E M NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V E M NGSLD F+ K +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K ++L E +G+ H N+++L G + + ++++ EYM NG+LD F+ + G
Sbjct: 88 KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL 147
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+A+ + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K T DV+SFG+V EV
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L+E +G+ H N++ L G + ++++ E+M NGSLD F+ + G
Sbjct: 76 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 135
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+L G+A+ + YL H + + I+ +S ++ D GL+R +++D T
Sbjct: 136 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 426 AGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ G + APE K T DV+S+G+V EV
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT- 373
K R++L E +G+ H N+++L G + + +++V E M NGSLD F+ K +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 374 -RYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQND--ACVTT 423
+L G+AS + YL H + + I+ +S ++ D GL+R++++D A TT
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PE K T DV+S+G+V EV
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 102/234 (43%), Gaps = 55/234 (23%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSL-TPEPYSTLPPPLNKVGRVLFHQPV 82
SV TF NF D ++ +I G G L L Y T P GR L+ PV
Sbjct: 4 SVSFTFPNFWSDVEDS---IIFQGDANTTAGTLQLCKTNQYGT--PLQWSAGRALYSDPV 58
Query: 83 LAWP------AMFTTTFTVRISKFPDATGSG--DGMAFVMAQDNKPPPPN--GYGSYLGI 132
W A F T FT F TG+G DG+AF +A PP + G YLG+
Sbjct: 59 QLWDNKTESVASFYTEFTF----FLKITGNGPADGLAFFLA----PPDSDVKDAGEYLGL 110
Query: 133 MDKST--QDGVVRQLAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKS 189
+KST Q + +AVE DT+ N + P HIG++ S+ + VA K + D+ S
Sbjct: 111 FNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVS-VATKRWEDS--DIFS 167
Query: 190 GRNITVKIDYDGA-------------------------KTVPNAVYVGFTASTG 218
G+ T +I YDG+ + +P +V VG +ASTG
Sbjct: 168 GKIATARISYDGSAEILTVVLSYPDGSDYILSHSVDMRQNLPESVRVGISASTG 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 293 ILFSYKQLQK--ATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLL 350
IL K+ QK A +KE L GK E EI + +++H N+V L HL L
Sbjct: 35 ILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYL 93
Query: 351 VYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH---------- 399
+ + ++ G L D + KGF + +++ + A+ YLH D IVH
Sbjct: 94 IMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYY 150
Query: 400 ---SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVAL 456
+ + D GL+++ ++ V + GTPGY+APEV + D +S G++A
Sbjct: 151 SLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 457 EVACG 461
+ CG
Sbjct: 210 ILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 293 ILFSYKQLQK--ATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLL 350
IL K+ QK A +KE L GK E EI + +++H N+V L HL L
Sbjct: 35 ILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYL 93
Query: 351 VYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH---------- 399
+ + ++ G L D + KGF + +++ + A+ YLH D IVH
Sbjct: 94 IMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYY 150
Query: 400 ---SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVAL 456
+ + D GL+++ ++ V + GTPGY+APEV + D +S G++A
Sbjct: 151 SLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 457 EVACG 461
+ CG
Sbjct: 210 ILLCG 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWK 372
K R++L+E +G+ H N++ L G + ++++ E+M NGSLD F+ + G
Sbjct: 50 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 109
Query: 373 TRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+L G+A+ + YL + + I+ +S ++ D GL+R +++D T
Sbjct: 110 QLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 426 AGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ G + APE K T DV+S+G+V EV
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 207
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 56/247 (22%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMG-SVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
+V ++N F P N +I G ++ +G L L + P P + +GR L+ P+
Sbjct: 3 TVSFSWNKFVPKQPN----MILQGDAIVTSSGKLQLNKVDENGTPKP-SSLGRALYSTPI 57
Query: 83 LAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQ-DNKPPPPNGYGSYLGIMDK 135
W A F +F PD DG+AF +A D KP + YLG+ ++
Sbjct: 58 HIWDKETGSVASFAASFNFTFYA-PDTKRLADGLAFFLAPIDTKP---QTHAGYLGLFNE 113
Query: 136 S-TQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNIT 194
+ + D VV AVE DT+ N + P+ HIG++ S+ +S+ +T DL + +
Sbjct: 114 NESGDQVV---AVEFDTFRNSWDPPNP-HIGINVNSI------RSIKTTSWDLANNKVAK 163
Query: 195 VKIDYDGAKTV--------------------------PNAVYVGFTASTGL--LQESHQL 226
V I YD + ++ P V +GF+A+TGL ESH +
Sbjct: 164 VLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDV 223
Query: 227 LDRVFVS 233
L F S
Sbjct: 224 LSWSFAS 230
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 293 ILFSYKQLQK--ATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLL 350
IL K+ QK A +KE L GK E EI + +++H N+V L HL L
Sbjct: 35 ILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYL 93
Query: 351 VYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH---------- 399
+ + ++ G L D + KGF + +++ + A+ YLH D IVH
Sbjct: 94 IMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYY 150
Query: 400 ---SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVAL 456
+ + D GL+++ ++ V + GTPGY+APEV + D +S G++A
Sbjct: 151 SLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 457 EVACG 461
+ CG
Sbjct: 210 ILLCG 214
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 52/243 (21%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
S +F NFNP N N ++ ++ G L LT + P + +GR L+ P+
Sbjct: 3 STSFSFTNFNP---NQNNLILQEDALVNSAGTLELTA--VAAGAPVPDSLGRALYAAPIH 57
Query: 84 AWP----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPP--PPNGYGSYLGIMDKST 137
A FTT+F+ + P A DG+AF +A PP P G +LG+
Sbjct: 58 IHDNTTLASFTTSFSF-VMAAPAAAAVADGLAFFLA----PPDTQPQARGGFLGLFADRA 112
Query: 138 QDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKI 197
D + +AVE DTY N + P+ HIG+DT + +S +T D+ G + I
Sbjct: 113 HDASYQTVAVEFDTYSNAWD-PNYTHIGIDTNGI------ESKKTTPFDMVYGEKANIVI 165
Query: 198 DYDGAK--------------------------TVPNAVYVGFTASTGL---LQESHQLLD 228
Y + +P V VGF+A+TGL + E+H ++
Sbjct: 166 TYQASTKALAASLVFPVSQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVS 225
Query: 229 RVF 231
F
Sbjct: 226 WSF 228
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 293 ILFSYKQLQK--ATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLL 350
IL K+ QK A +K+ L GK E EI + +++H N+V L HL L
Sbjct: 35 ILAEDKRTQKLVAIKCIAKKALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYL 93
Query: 351 VYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH---------- 399
+ + ++ G L D + KGF + +++ + A+ YLH D IVH
Sbjct: 94 IMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYY 150
Query: 400 ---SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVAL 456
+ + D GL+++ ++ V + GTPGY+APEV + D +S G++A
Sbjct: 151 SLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 457 EVACG 461
+ CG
Sbjct: 210 ILLCG 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKG 367
K+ L GK E EI + +++H+N+V L HL LV + ++ G L D + KG
Sbjct: 57 KKALKGK-ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG 115
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARL 414
F K ++ + A+ YLH IVH E + D GL+++
Sbjct: 116 FYTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
Query: 415 IQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ V + GTPGY+APEV + D +S G++A + CG
Sbjct: 173 -EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 307 FSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
+K ++ G+ ERE I + LRH ++++L ++ +++V EY N D + +
Sbjct: 42 LAKSDMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 97
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ 416
+ + + + SA+ Y H IVH N ++ D GL+ I
Sbjct: 98 DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IM 153
Query: 417 NDACVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACGR 462
D G+P Y APEV SGK A PE DV+S G++ + C R
Sbjct: 154 TDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 307 FSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
+K ++ G+ ERE I + LRH ++++L ++ +++V EY N D + +
Sbjct: 51 LAKSDMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 106
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ 416
+ + + + SA+ Y H IVH N ++ D GL+ I
Sbjct: 107 DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IM 162
Query: 417 NDACVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACGR 462
D G+P Y APEV SGK A PE DV+S G++ + C R
Sbjct: 163 TDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 307 FSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
+K ++ G+ ERE I + LRH ++++L ++ +++V EY N D + +
Sbjct: 52 LAKSDMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 107
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ 416
+ + + + SA+ Y H IVH N ++ D GL+ I
Sbjct: 108 DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IM 163
Query: 417 NDACVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACGR 462
D G+P Y APEV SGK A PE DV+S G++ + C R
Sbjct: 164 TDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 307 FSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
+K ++ G+ ERE I + LRH ++++L ++ +++V EY N D + +
Sbjct: 46 LAKSDMQGRIERE----ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 101
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ 416
+ + + + SA+ Y H IVH N ++ D GL+ I
Sbjct: 102 DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IM 157
Query: 417 NDACVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACGR 462
D G+P Y APEV SGK A PE DV+S G++ + C R
Sbjct: 158 TDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 104/245 (42%), Gaps = 51/245 (20%)
Query: 27 ITFNNFNPDSCNNGNDLICMGSVT-AGNGYLSLT------PEPYSTLPPPLNKVGRVLFH 79
T NNF P N DL+ G + + G L LT P+ YS VGR L+
Sbjct: 6 FTINNFVP----NEADLLFQGEASVSSTGVLQLTKVENGQPQKYS--------VGRALYA 53
Query: 80 QPVLAW------PAMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
PV W A F+T+FT + K P+ + DG+AF +A + P YLG+
Sbjct: 54 APVRIWGNTTGSVASFSTSFTFVV-KAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLF 112
Query: 134 DKSTQDGVVRQLAVELDTYM-NEY--MIPDGNHIGVDTTSMATPVAA------------- 177
+ S D + +AVE DTY + Y P+ HIG+D + +
Sbjct: 113 NNSNSDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFAT 172
Query: 178 -------KSLNSTGIDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQ--ESHQLLD 228
K+L ++ + + +V D + +P V VGF+A+TG E+H +L
Sbjct: 173 ITYLAPNKTLIASLVYPSNQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLS 232
Query: 229 RVFVS 233
F S
Sbjct: 233 WSFTS 237
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF--IGKGFLDWK 372
+ RE+L+E +G+ H N+++L G ++++ E+M NG+LD F + G
Sbjct: 57 RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 116
Query: 373 TRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+L G+AS + YL E + I+ +S ++ D GL+R ++ ++ T
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 426 AGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ G + APE K T D +S+G+V EV
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF--IGKGFLDWK 372
+ RE+L+E +G+ H N+++L G ++++ E+M NG+LD F + G
Sbjct: 59 RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 118
Query: 373 TRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+L G+AS + YL E + I+ +S ++ D GL+R ++ ++ T
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 426 AGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ G + APE K T D +S+G+V EV
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 216
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 55/244 (22%)
Query: 29 FNNFNPDSCN---NGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAW 85
F+ F P N G+ L+ + G L LT + +P P + +GR + P+ W
Sbjct: 8 FSKFKPLEPNLILQGDALVTVA------GVLQLTNVDSNGVPEP-SSLGRATYSAPINIW 60
Query: 86 P------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQD 139
A F T+F I P+ DG+AF +A P+ G +LG+ D + D
Sbjct: 61 DSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAP--VASAPDSGGGFLGLFDSAVGD 117
Query: 140 GVVRQLAVELDTYMNE-YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKID 198
+ +AVE DTY N + P HIG D S++ S+ + L +G V I
Sbjct: 118 TTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSIS------SIKTVKWSLANGEAAKVLIT 171
Query: 199 YDGA--------------------------KTVPNAVYVGFTASTGLLQ---ESHQLLDR 229
Y+ A +P V VGF+A+TG + E+H +
Sbjct: 172 YNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSW 231
Query: 230 VFVS 233
F S
Sbjct: 232 SFAS 235
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 297 YKQLQKATHNFSKENLLGK--GEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEY 354
Y+ QK T +L K ++ EI + RL H N+++L+ + LV E
Sbjct: 70 YRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129
Query: 355 MANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS------------- 400
+ G L D + KG+ + + + A+ YLHE IVH
Sbjct: 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAP 186
Query: 401 EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
+ ++ D GL++++++ + T+ GTPGY APE+ PE D++S G++ + C
Sbjct: 187 DAPLKIADFGLSKIVEHQVLMKTV-CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC 245
Query: 461 G 461
G
Sbjct: 246 G 246
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|C Chain C, Fava Bean Lectin-Glucose Complex
Length = 182
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 32/194 (16%)
Query: 20 IQPVSVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFH 79
I S+P F PD N + G GY T E + N VGR L+
Sbjct: 4 ITSFSIP----KFRPDQPN---------LIFQGGGYT--TKEKLTLTKAVKNTVGRALYS 48
Query: 80 QPVLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
P+ W A FTTTF I P+ DG F +A + P G YLG+
Sbjct: 49 LPIHIWDSETGNVADFTTTFIFVIDA-PNGYNVADGFTFFIAPVDTKPQTGG--GYLGVF 105
Query: 134 DKSTQDGVVRQLAVELDTYMNEYMIPDGN--HIGVDTTSMATPVAAKSLNSTGIDLKSGR 191
+ D + +AVE DT+ N P HIG+D ++ KS+++ +L++G
Sbjct: 106 NGKDYDKTAQTVAVEFDTFYNAAWDPSNGKRHIGIDVNTI------KSISTKSWNLQNGE 159
Query: 192 NITVKIDYDGAKTV 205
V I ++ V
Sbjct: 160 EAHVAISFNATTNV 173
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +++H+N+V L H LV + ++ G L D + +G K ++ +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 382 ASALLYLHEECDKPIVHHS-----------EYNARL--GDLGLARLIQNDACVTTMMAGT 428
SA+ YLHE IVH E N+++ D GL+++ QN + + GT
Sbjct: 116 LSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGT 170
Query: 429 PGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
PGY+APEV + D +S G++ + CG
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWK 372
+ R++L+E +G+ H N+++L G ++V EYM NGSLD F+ G
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQN--DACVTT 423
+L G+ + + YL H + + ++ S ++ D GL+R++++ DA TT
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV-ACGRR 463
P + APE + DV+SFG+V EV A G R
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWK 372
+ R++L+E +G+ H N+++L G ++V EYM NGSLD F+ G
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 373 TRYKILTGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQN--DACVTT 423
+L G+ + + YL H + + ++ S ++ D GL+R++++ DA TT
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV-ACGRR 463
P + APE + DV+SFG+V EV A G R
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 101/259 (38%), Gaps = 55/259 (21%)
Query: 29 FNNFNPDSCN---NGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAW 85
F+ F P N G+ L+ + G L LT + +P P + +GR + P+ W
Sbjct: 8 FSKFKPLEPNLILQGDALVTVA------GVLQLTNVDKNGVPEP-SSLGRATYSAPINIW 60
Query: 86 P------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQD 139
A F T+F I P+ DG+AF +A P+ G +LG+ D +
Sbjct: 61 DSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAP--VASAPDSGGGFLGLFDSAVSG 117
Query: 140 GVVRQLAVELDTYMNE-YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKID 198
+ +AVE DTY N + P HIG D S++ S+ + L +G V I
Sbjct: 118 STYQTVAVEFDTYENTVFTDPPYTHIGFDVNSIS------SIKTVKWSLANGEAAKVLIT 171
Query: 199 YDGA--------------------------KTVPNAVYVGFTASTGLLQ---ESHQLLDR 229
Y+ A +P V VGF+A+TG E+H +
Sbjct: 172 YNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSW 231
Query: 230 VFVSFPIEFDEKGQSKVDG 248
F S K S +DG
Sbjct: 232 SFASKLAGXXTKDSSFLDG 250
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 311 NLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFL 369
+++GK RE I + RH ++++L + +V EY++ G L +I K G L
Sbjct: 58 DVVGKIRRE----IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRL 113
Query: 370 DWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDA 419
D K ++ + S + Y H +VH + NA++ D GL+ ++ +D
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDG 169
Query: 420 CVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACG 461
G+P Y APEV SG+ A PE D++S G++ + CG
Sbjct: 170 EFLRXSCGSPNYAAPEV-ISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR 374
E +++ E + +L H LVQL G C E+ + LV+E+M +G L ++ +G +T
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 375 YKILTGLASALLYLHEECDKPIVHHSEYNAR-----------LGDLGLARLIQNDACVTT 423
+ + + YL E C V H + AR + D G+ R + +D ++
Sbjct: 106 LGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PEV + + + DV+SFG++ EV
Sbjct: 162 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR 374
E +++ E + +L H LVQL G C E+ + LV+E+M +G L ++ +G +T
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103
Query: 375 YKILTGLASALLYLHEECDKPIVHHSEYNAR-----------LGDLGLARLIQNDACVTT 423
+ + + YL E C V H + AR + D G+ R + +D ++
Sbjct: 104 LGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PEV + + + DV+SFG++ EV
Sbjct: 160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR 374
E +++ E + +L H LVQL G C E+ + LV+E+M +G L ++ +G +T
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 108
Query: 375 YKILTGLASALLYLHEECDKPIVHHSEYNAR-----------LGDLGLARLIQNDACVTT 423
+ + + YL E C V H + AR + D G+ R + +D ++
Sbjct: 109 LGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PEV + + + DV+SFG++ EV
Sbjct: 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
+V T+ +F S NG ++ +G T G L LT + P + G+ + +PV
Sbjct: 3 TVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTD-ANGNPVRSSAGQASYSEPVF 61
Query: 84 AW-----PAMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQ 138
W A F T+FT + + T DG+AF +A + YG +LG+ T
Sbjct: 62 LWDSTGKAASFYTSFTFLLKNYGAPTA--DGLAFFLAPVDSSV--KDYGGFLGLFRHETA 117
Query: 139 DGVVRQ--LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTG----------- 184
+ +AVE DT++N ++ P HIG+D S+ + + N
Sbjct: 118 ADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYGSSIATAHIT 177
Query: 185 -----------IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVF 231
+ + GR+ + D AK +P V +GF+A G + ++ L F
Sbjct: 178 YDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFF 235
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREH--LLLVYEYMANGSLDLFIGKG-----FLDWKT 373
++E+ + L+H N+V+ +R + L +V EY G L I KG +LD +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 374 RYKILTGLASALLYLHEECD--KPIVHHS----------EYNARLGDLGLARLIQNDACV 421
+++T L AL H D ++H + N +LGD GLAR++ +D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 422 TTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
GTP Y++PE + D++S G + E+
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR 374
E +++ E + +L H LVQL G C E+ + LV+E+M +G L ++ +G +T
Sbjct: 66 EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 125
Query: 375 YKILTGLASALLYLHEECDKPIVHHSEYNAR-----------LGDLGLARLIQNDACVTT 423
+ + + YL E C V H + AR + D G+ R + +D ++
Sbjct: 126 LGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 181
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PEV + + + DV+SFG++ EV
Sbjct: 182 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREH--LLLVYEYMANGSLDLFIGKG-----FLDWKT 373
++E+ + L+H N+V+ +R + L +V EY G L I KG +LD +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 374 RYKILTGLASALLYLHEECD--KPIVHHS----------EYNARLGDLGLARLIQNDACV 421
+++T L AL H D ++H + N +LGD GLAR++ +D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 422 TTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
GTP Y++PE + D++S G + E+
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLV 108
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 109 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 168
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLV 106
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 107 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 166
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 167 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG R L
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLV 366
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 367 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 31/185 (16%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL---------DLFIG 365
K E E+ + ++H N+VQ R E L +V +Y G L LF
Sbjct: 65 KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE 124
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLI 415
LDW + AL ++H D+ I+H + +LGD G+AR++
Sbjct: 125 DQILDW------FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVD 475
+ + GTP YL+PE+ + + D+++ G V E+ + + FE S+ +
Sbjct: 176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA---FEAGSMKN 232
Query: 476 YVWSL 480
V +
Sbjct: 233 LVLKI 237
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG R L
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLV 283
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + ++RH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG R L
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLV 107
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 108 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 167
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 168 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG R L
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLV 283
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG + R L
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLV 284
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GL RLI+++ A
Sbjct: 285 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF 344
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 345 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR 374
E +++ E + +L H LVQL G C E+ + LV E+M +G L ++ +G +T
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL 106
Query: 375 YKILTGLASALLYLHEECDKPIVHHSEYNAR-----------LGDLGLARLIQNDACVTT 423
+ + + YL E C V H + AR + D G+ R + +D ++
Sbjct: 107 LGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PEV + + + DV+SFG++ EV
Sbjct: 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 19/190 (10%)
Query: 287 SAANVPILFSYKQLQKATHNFSKENLLGKGEREYLAE--ICTIGRLRHKNLVQLRGWCHE 344
S V + YK QK F LL K + E I + LRH ++++L
Sbjct: 21 SFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT 80
Query: 345 REHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH----- 399
+++V EY D + K + + + A+ Y H IVH
Sbjct: 81 PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPE 137
Query: 400 -----SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFG 452
N ++ D GL+ I D G+P Y APEV +GK A PE DV+S G
Sbjct: 138 NLLLDDNLNVKIADFGLSN-IMTDGNFLKTSCGSPNYAAPEV-INGKLYAGPEVDVWSCG 195
Query: 453 MVALEVACGR 462
+V + GR
Sbjct: 196 IVLYVMLVGR 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREH--LLLVYEYMANGSLDLFIGKG-----FLDWKT 373
++E+ + L+H N+V+ +R + L +V EY G L I KG +LD +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 374 RYKILTGLASALLYLHEECD--KPIVHHS----------EYNARLGDLGLARLIQNDACV 421
+++T L AL H D ++H + N +LGD GLAR++ +D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 422 TTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
GTP Y++PE + D++S G + E+
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG R L
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLV 110
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 111 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 170
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 171 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 31 NFNPDSCNNGNDLICM-GSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP-- 86
+FN +S + GN I G VT NG + LT +N VGRVL+ PV W
Sbjct: 5 SFNFNSFSEGNPAINFQGDVTVLSNGNIQLTN------LNKVNSVGRVLYAMPVRIWSSA 58
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMA-QDNKPPPPNGYGSYLGIMDKSTQDGV 141
A F T+F+ + D DG+ F +A +D + P + G LG+ D G
Sbjct: 59 TGNVASFLTSFSFEMKDIKDYD-PADGIIFFIAPEDTQIPAGSIGGGTLGVSDTK---GA 114
Query: 142 VRQLAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYD 200
+ VE DTY N EY P +H+G+D S+ S+ + + SG + V + YD
Sbjct: 115 GHFVGVEFDTYSNSEYNDPPTDHVGIDVNSV------DSVKTVPWNSVSGAVVKVTVIYD 168
Query: 201 GA-KTVPNAVYVGFTASTGLLQESHQLLD 228
+ KT+ AV T G + Q++D
Sbjct: 169 SSTKTLSVAV----TNDNGDITTIAQVVD 193
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ GSL F+ KG R L
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLV 283
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 31 NFNPDSCNNGNDLICM-GSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP-- 86
+FN +S + GN I G VT NG + LT +N VGRVL+ PV W
Sbjct: 5 SFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLN------KVNSVGRVLYAMPVRIWSSA 58
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMA-QDNKPPPPNGYGSYLGIMDKSTQDGV 141
A F T+F+ + D DG+ F +A +D + P + G LG+ D G
Sbjct: 59 TGNVASFLTSFSFEMKDIKDYD-PADGIIFFIAPEDTQIPAGSIGGGTLGVSDTK---GA 114
Query: 142 VRQLAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYD 200
+ VE DTY N EY P +H+G+D S+ S+ + + SG + V + YD
Sbjct: 115 GHFVGVEFDTYSNSEYNDPPTDHVGIDVNSV------DSVKTVPWNSVSGAVVKVTVIYD 168
Query: 201 GA-KTVPNAVYVGFTASTGLLQESHQLLD 228
+ KT+ AV T G + Q++D
Sbjct: 169 SSTKTLSVAV----TNDNGDITTIAQVVD 193
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 98/241 (40%), Gaps = 38/241 (15%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSV-TAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F NF+ D N LI G T+ N L LT S P + VGR+L V
Sbjct: 11 SLSFSFINFDRDERN----LIFQGDAHTSRNNILQLT-RTDSNGAPVRSTVGRILHSAQV 65
Query: 83 LAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKS 136
W A T F+ +S + DG+AF +A + P G LG+ +
Sbjct: 66 RLWEKSTNRVANLQTQFSFFLSS--PLSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPR 123
Query: 137 T--QDGVVRQLAVELDTYMNE---YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLK--- 188
T + + LAVE DT+ + P+ HIG+D S+ + + G L
Sbjct: 124 TALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVRWERREGKTLNVLV 183
Query: 189 ----SGRNITVKIDY-DGAK-----------TVPNAVYVGFTASTGLLQESHQLLDRVFV 232
S R I V Y DG + +P V VGF+A++G ++H L F
Sbjct: 184 TYNPSTRTIDVVATYPDGQRYQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFT 243
Query: 233 S 233
S
Sbjct: 244 S 244
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ G L F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILT 379
+L E + +LRH+ LVQL E E + +V EYM+ G L F+ KG + R L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLV 117
Query: 380 GLASALL----------YLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+A+ + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 45/203 (22%)
Query: 68 PPLNKVGRVLFHQPVLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPP 121
P +GR L+ P+ W A F T+F+ + D + DG+AF +A N
Sbjct: 42 PTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKA--DKSDGVDGLAFFLAPANSQI 99
Query: 122 PPNGYGSYLGIMDKSTQDGVVRQLAVELDTYMNEY---MIPDGNHIGVDTTSMATPVAAK 178
P G+ S + +AVE DTY + PD HIG+D S+ K
Sbjct: 100 PSGSSAGMFGLFSSSDSKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSI------K 153
Query: 179 SLNSTGIDLKSG-------------RNITVKIDY--DGAKTV-----------PNAVYVG 212
S+ + D ++G +++TV + Y DG + P V VG
Sbjct: 154 SIKTVKWDWRNGEVADVVITYRAPTKSLTVCLSYPSDGTSNIITASVDLKAILPEWVSVG 213
Query: 213 FTASTGLLQ--ESHQLLDRVFVS 233
F+ G E+H +L F S
Sbjct: 214 FSGGVGNAAEFETHDVLSWYFTS 236
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHL-LLVYEYMANGSLDLF-IGKGFLDWKTRY 375
++ + E+ + +LRH N +Q RG C+ REH LV EY + DL + K L
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA 157
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARLIQNDACVTTMMA------G 427
+ G L YLH ++H N L + GL +L D ++MA G
Sbjct: 158 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKL--GDFGSASIMAPANXFVG 212
Query: 428 TPGYLAPEVSFS---GKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYV------- 477
TP ++APEV + G+ + DV+S G+ +E+A R LF N++
Sbjct: 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQNES 270
Query: 478 -------WSLYGKNALLECVDK 492
WS Y +N + C+ K
Sbjct: 271 PALQSGHWSEYFRNFVDSCLQK 292
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRY---- 375
+L E + +LRH+ LVQL E E + +V EYM GSL F+ KG R
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLV 114
Query: 376 ----KILTGLA--SALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+I +G+A + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF 174
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG---------FLD 370
+L E + +L+H LVQL E E + +V EYM GSL F+ G +D
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD 109
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ + Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE + G+ T + DV+SFG++ E+ R
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR 374
E +++ E + +L H LVQL G C E+ + LV+E+M +G L ++ +G +T
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 375 YKILTGLASALLYLHEECDKPIVHHSEYNAR-----------LGDLGLARLIQNDACVTT 423
+ + + YL E V H + AR + D G+ R + +D ++
Sbjct: 106 LGMCLDVCEGMAYLEEAS----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + +PEV + + + DV+SFG++ EV
Sbjct: 162 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHL-LLVYEYMANGSLDLF-IGKGFLDWKTRY 375
++ + E+ + +LRH N +Q RG C+ REH LV EY + DL + K L
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA 118
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARLIQNDACVTTMMA------G 427
+ G L YLH ++H N L + GL +L D ++MA G
Sbjct: 119 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKL--GDFGSASIMAPANXFVG 173
Query: 428 TPGYLAPEVSFS---GKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYV------- 477
TP ++APEV + G+ + DV+S G+ +E+A R LF N++
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQNES 231
Query: 478 -------WSLYGKNALLECVDK 492
WS Y +N + C+ K
Sbjct: 232 PALQSGHWSEYFRNFVDSCLQK 253
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRY---- 375
+L E + +LRH+ LVQL E E + +V EYM GSL F+ KG R
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLV 114
Query: 376 ----KILTGLA--SALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGT 428
+I +G+A + Y+H + I+ ++ D GLARLI+++ A
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 174
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
P + APE + G+ T + DV+SFG++ E+ R
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 311 NLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFL 369
+++GK +RE I + RH ++++L +V EY++ G L +I K G +
Sbjct: 53 DVVGKIKRE----IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV 108
Query: 370 DWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDA 419
+ ++ + SA+ Y H +VH + NA++ D GL+ ++ +
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 420 CVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACG 461
+ T G+P Y APEV SG+ A PE D++S G++ + CG
Sbjct: 166 FLRTS-CGSPNYAAPEV-ISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 330 LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLH 389
L+H N++ LRG C + +L LV E+ G L+ + + +A + YLH
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 390 EECDKPIVHH------------------SEYNARLGDLGLARLIQNDACVTTMM--AGTP 429
+E PI+H S ++ D GLAR TT M AG
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR----TTKMSAAGAY 178
Query: 430 GYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++APEV + + DV+S+G++ E+ G
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM----------ANGSLDLFIGKGFLD 370
L EIC + L+HKN+V+L H + L LV+E+ NG LD I K FL
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL- 107
Query: 371 WKTRYKILTGL--ASALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMA 426
+++L GL + LH + KP ++ + +L D GLAR +
Sbjct: 108 ----FQLLKGLGFCHSRNVLHRDL-KPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV 162
Query: 427 GTPGYLAPEVSFSGKA-TPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y P+V F K + D++S G + E+A R LF N + D + ++
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP--LFPGNDVDDQLKRIF 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 311 NLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFL 369
+++GK +RE I + RH ++++L +V EY++ G L +I K G +
Sbjct: 53 DVVGKIKRE----IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV 108
Query: 370 DWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQN-- 417
+ ++ + SA+ Y H +VH + NA++ D GL+ ++ +
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 418 ---DACVTTMMAGTPGYLAPEVSFSGK--ATPEFDVYSFGMVALEVACG 461
D+C G+P Y APEV SG+ A PE D++S G++ + CG
Sbjct: 166 FLRDSC------GSPNYAAPEV-ISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 320 YLAEICTIGRLRHKNLVQLRG-WCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY 375
+LAE + +LRH NLVQL G E+ L +V EYMA GSL ++ G+ L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 376 KILTGLASALLYL------HEECDKPIVHHSEYN-ARLGDLGLARLIQNDACVTTMMAGT 428
K + A+ YL H + V SE N A++ D GL + +A T
Sbjct: 293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKL 348
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K + + DV+SFG++ E+
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 320 YLAEICTIGRLRHKNLVQLRG-WCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY 375
+LAE + +LRH NLVQL G E+ L +V EYMA GSL ++ G+ L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 376 KILTGLASALLYL------HEECDKPIVHHSEYN-ARLGDLGLARLIQNDACVTTMMAGT 428
K + A+ YL H + V SE N A++ D GL + +A T
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKL 161
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K + + DV+SFG++ E+
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 320 YLAEICTIGRLRHKNLVQLRG-WCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY 375
+LAE + +LRH NLVQL G E+ L +V EYMA GSL ++ G+ L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 376 KILTGLASALLYL------HEECDKPIVHHSEYN-ARLGDLGLARLIQNDACVTTMMAGT 428
K + A+ YL H + V SE N A++ D GL + +A T
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKL 176
Query: 429 P-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE K + + DV+SFG++ E+
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 297 YKQLQKATHNFSKENLLGK--------GEREYLAEICTIGRLRHKNLVQLRGWCHEREHL 348
+ Q K TH + E ++ K +R +L E+ + L H N+++ G ++ + L
Sbjct: 23 FGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 349 LLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLASALLYLHEECDKPIVHH------- 399
+ EY+ G+L I W R +AS + YLH I+H
Sbjct: 83 NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNC 139
Query: 400 ---SEYNARLGDLGLARLIQN--------------DACVTTMMAGTPGYLAPEVSFSGKA 442
N + D GLARL+ + D + G P ++APE+
Sbjct: 140 LVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199
Query: 443 TPEFDVYSFGMVALEV 458
+ DV+SFG+V E+
Sbjct: 200 DEKVDVFSFGIVLCEI 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 316 GEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 101
Query: 375 -YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTT 423
++ + A+ YL K +H + + ++ D GL+R + +D ++
Sbjct: 102 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ + P + PEV K + + D+++FG++ E+
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR-- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 375 YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTM 424
++ + A+ YL K +H + + ++ D GL+R + +D +++
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ P + PEV K + + D+++FG++ E+
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 316 GEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 46 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 105
Query: 375 -YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTT 423
++ + A+ YL K +H + + ++ D GL+R + +D ++
Sbjct: 106 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 162
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ + P + PEV K + + D+++FG++ E+
Sbjct: 163 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 53 NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP------AMFTTTFTVRISK---FPDA 103
NG L LT + +P GR L+ +P+ W A F T F+ I++ +P+
Sbjct: 28 NGVLELTKLTKNGVPV-WKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEP 86
Query: 104 TGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQLAVELDTYMNEYMIPDGNH 163
DG+ F M N P + G LG+ D AVE DT+ N + P H
Sbjct: 87 ---ADGLTFFMVPPNSPQGED--GGNLGVFKPPEGDNA---FAVEFDTFQNTWD-PQVPH 137
Query: 164 IGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGAKTVPNAV 209
IG+D S+ V++K+L+ L++G V I YD + N V
Sbjct: 138 IGIDVNSI---VSSKTLH---FQLENGGVANVVIKYDSPTKILNVV 177
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 316 GEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 47 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 106
Query: 375 -YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTT 423
++ + A+ YL K +H + + ++ D GL+R + +D ++
Sbjct: 107 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ + P + PEV K + + D+++FG++ E+
Sbjct: 164 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR-- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 375 YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTM 424
++ + A+ YL K +H + + ++ D GL+R + +D +++
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV 179
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ P + PEV K + + D+++FG++ E+
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 61 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 63 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRG-WCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKT 373
+ +LAE + +LRH NLVQL G E+ L +V EYMA GSL ++ G+ L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYN-ARLGDLGLARLIQNDACVTTMMA 426
K + A+ YL H + V SE N A++ D GL + +A T
Sbjct: 110 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTG 165
Query: 427 GTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P + APE + + DV+SFG++ E+
Sbjct: 166 KLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 64 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 183 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR-- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 113
Query: 375 YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTM 424
++ + A+ YL K +H + + ++ D GL+R + +D +++
Sbjct: 114 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 170
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ P + PEV K + + D+++FG++ E+
Sbjct: 171 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 65 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 184 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 57 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 56 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 61 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 60 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 179 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 314 GKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----KGF 368
K + + EI + +L H N+++ E L +V E G L I K
Sbjct: 73 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL 132
Query: 369 LDWKTRYKILTGLASALLYLHEECDKPIVHHSEYNA----------RLGDLGLARLIQND 418
+ +T +K L SAL ++H + ++H A +LGDLGL R +
Sbjct: 133 IPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
+ GTP Y++PE + D++S G + E+A
Sbjct: 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 316 GEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTR- 374
E E++ E + L H+ LVQL G C ++ + ++ EYMANG L ++ + ++T+
Sbjct: 47 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 106
Query: 375 -YKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTT 423
++ + A+ YL K +H + + ++ D GL+R + +D ++
Sbjct: 107 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 424 MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ P + PEV K + + D+++FG++ E+
Sbjct: 164 RGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 311 NLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFL 369
+L + RE L E+ + +H N+V++ E L ++ E++ G+L + + L
Sbjct: 79 DLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRL 138
Query: 370 DWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDA 419
+ + + + AL YLH + ++H + +L D G I D
Sbjct: 139 NEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195
Query: 420 CVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APEV E D++S G++ +E+ G
Sbjct: 196 PKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 40 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 90
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 91 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 148
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
Query: 452 GMVALEV 458
G+V E+
Sbjct: 207 GVVLYEL 213
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY 375
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 376 KILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMM 425
+ T ++SA+ YL + K +H + + ++ D GL+RL+ D
Sbjct: 361 YMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 452
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 50 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI+++ A P
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM----------ANGSLDLFIGKGFLD 370
L EIC + L+HKN+V+L H + L LV+E+ NG LD I K FL
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL- 107
Query: 371 WKTRYKILTGL--ASALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMA 426
+++L GL + LH + KP ++ + +L + GLAR +
Sbjct: 108 ----FQLLKGLGFCHSRNVLHRDL-KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162
Query: 427 GTPGYLAPEVSFSGKA-TPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y P+V F K + D++S G + E+A R LF N + D + ++
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP--LFPGNDVDDQLKRIF 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 44 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 94
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 95 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 152
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 153 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 210
Query: 452 GMVALEV 458
G+V E+
Sbjct: 211 GVVLYEL 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 119
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 120 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EXX 175
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 55 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 114
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 115 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EXX 170
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 146
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 147 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EXX 202
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 42 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 92
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 93 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 150
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 151 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 208
Query: 452 GMVALEV 458
G+V E+
Sbjct: 209 GVVLYEL 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L LV EY + G + D + G++ K +
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SA+ Y H+ K IVH ++ N ++ D G + + T G+P Y
Sbjct: 116 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPY 171
Query: 432 LAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
APE+ F GK PE DV+S G++ + G
Sbjct: 172 AAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 37 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 145
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
Query: 452 GMVALEV 458
G+V E+
Sbjct: 204 GVVLYEL 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 116 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EXX 171
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 54 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 113
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 114 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EXX 169
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY 375
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 376 KILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMM 425
+ T ++SA+ YL + K +H + + ++ D GL+RL+ D
Sbjct: 319 YMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 410
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + L E + RH L L+ + L V EY G L
Sbjct: 39 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 98
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH E K +V+ + + ++ D G
Sbjct: 99 FHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFG 156
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + D GTP YLAPEV D + G+V E+ CGR
Sbjct: 157 LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 43 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 93
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 94 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 151
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 152 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 209
Query: 452 GMVALEV 458
G+V E+
Sbjct: 210 GVVLYEL 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 324 ICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG--FLDWKTRYKILTGL 381
I ++ R H L QL + L V E++ G L I K F + + R+ +
Sbjct: 76 ILSLAR-NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEI 133
Query: 382 ASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SAL++LH DK I++ E + +L D G+ + + T GTP Y
Sbjct: 134 ISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+APE+ P D ++ G++ E+ CG
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 55 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 105
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 106 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 163
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
Query: 452 GMVALEV 458
G+V E+
Sbjct: 222 GVVLYEL 228
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 115 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 171
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 116 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EFF 171
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 346 EHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS----- 400
+ L +V EY+A GSL + + +D + AL +LH ++H +
Sbjct: 91 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDN 147
Query: 401 -----EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
+ + +L D G I + + M GTP ++APEV P+ D++S G++A
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 207
Query: 456 LEVACGR 462
+E+ G
Sbjct: 208 IEMIEGE 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL 378
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +L
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 379 ---TGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMM 425
T ++SA+ YL + K +H + + ++ D GL+RL+ D
Sbjct: 322 YMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 55 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 105
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ K L + + +I G+ Y+H + + I
Sbjct: 106 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 163
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
Query: 452 GMVALEV 458
G+V E+
Sbjct: 222 GVVLYEL 228
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLAEICTIGR-LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL +RE ++ +I R L H+++V G+ + + + +V E SL
Sbjct: 74 KSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR 133
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY L + YLH ++H + + ++GD GLA +
Sbjct: 134 KALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D ++ GTP Y+APEV + E DV+S G + + G+
Sbjct: 190 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 346 EHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS----- 400
+ L +V EY+A GSL + + +D + AL +LH ++H
Sbjct: 90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDN 146
Query: 401 -----EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
+ + +L D G I + + M GTP ++APEV P+ D++S G++A
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 456 LEVACGR 462
+E+ G
Sbjct: 207 IEMIEGE 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L L+ EY + G + D + G + K +
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SA+ Y H+ K IVH ++ N ++ D G + + T G+P Y
Sbjct: 121 VSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPPY 176
Query: 432 LAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
APE+ F GK PE DV+S G++ + G
Sbjct: 177 AAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLAEICTIGR-LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL +RE ++ +I R L H+++V G+ + + + +V E SL
Sbjct: 76 KSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR 135
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY L + YLH ++H + + ++GD GLA +
Sbjct: 136 KALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D ++ GTP Y+APEV + E DV+S G + + G+
Sbjct: 192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 346 EHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS----- 400
+ L +V EY+A GSL + + +D + AL +LH ++H
Sbjct: 90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDN 146
Query: 401 -----EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
+ + +L D G I + + M GTP ++APEV P+ D++S G++A
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 456 LEVACGR 462
+E+ G
Sbjct: 207 IEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 346 EHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS----- 400
+ L +V EY+A GSL + + +D + AL +LH ++H
Sbjct: 91 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDN 147
Query: 401 -----EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
+ + +L D G I + + M GTP ++APEV P+ D++S G++A
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 207
Query: 456 LEVACGR 462
+E+ G
Sbjct: 208 IEMIEGE 214
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + L E + RH L L+ + L V EY G L
Sbjct: 38 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 97
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH E K +V+ + + ++ D G
Sbjct: 98 FHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFG 155
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + D GTP YLAPEV D + G+V E+ CGR
Sbjct: 156 LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 115 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + L E + RH L L+ + L V EY G L
Sbjct: 37 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 96
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH E K +V+ + + ++ D G
Sbjct: 97 FHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFG 154
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + D GTP YLAPEV D + G+V E+ CGR
Sbjct: 155 LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHL------LLVYEYMANGSLDL 362
++ L K + EI + +L H N+V R + L LL EY G L
Sbjct: 49 RQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK 108
Query: 363 FIGK-----GFLDWKTRYKILTGLASALLYLHEECDKPIVHH-------------SEYNA 404
++ + G + R +L+ ++SAL YLHE I+H
Sbjct: 109 YLNQFENCCGLKEGPIR-TLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIH 164
Query: 405 RLGDLGLAR-LIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
++ DLG A+ L Q + C T GT YLAPE+ K T D +SFG +A E G R
Sbjct: 165 KIIDLGYAKELDQGELC--TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHL------LLVYEYMANGSLDL 362
++ L K + EI + +L H N+V R + L LL EY G L
Sbjct: 48 RQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK 107
Query: 363 FIGK-----GFLDWKTRYKILTGLASALLYLHEECDKPIVHH-------------SEYNA 404
++ + G + R +L+ ++SAL YLHE I+H
Sbjct: 108 YLNQFENCCGLKEGPIR-TLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIH 163
Query: 405 RLGDLGLAR-LIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
++ DLG A+ L Q + C T GT YLAPE+ K T D +SFG +A E G R
Sbjct: 164 KIIDLGYAKELDQGELC--TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H + I+ + ++ D GLARLI++ A P
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 118 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 31/194 (15%)
Query: 68 PPLNKVGRVLFHQPVLAWP------AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPP 121
P +GR L+ P W A F T+FT I P+ + DG+AF +A + P
Sbjct: 42 PSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQA-PNPATTADGLAFFLAPVDTQP 100
Query: 122 PPNGYGSYLGIMDKSTQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLN 181
G LGI + + +AVE DT+ N P G H+G++ S+ + + N
Sbjct: 101 L--DLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDWDPKGRHLGINVNSIES-IKTVPWN 157
Query: 182 STGIDL--------KSGRNITVKIDYDGAKT-------------VPNAVYVGFTASTGLL 220
T ++ S +++T + Y +T +P V GF+A+TG+
Sbjct: 158 WTNGEVANVFISYEASTKSLTASLVYPSLETSFIIDAIVDVKIVLPEWVRFGFSATTGID 217
Query: 221 QESHQLLDRVFVSF 234
+ Q D + SF
Sbjct: 218 KGYVQTNDVLSWSF 231
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 116 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 116 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---------KGFLD 370
+LAE + +L+H+ LV+L +E + ++ EYM NGSL F+ LD
Sbjct: 51 FLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ Y+H I+ + ++ D GLARLI+++ A P
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+ APE G T + DV+SFG++ E+ R
Sbjct: 170 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L LV EY + G + D + G + K +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 382 ASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SA+ Y H+ K IVH + N ++ D G + + T G+P Y
Sbjct: 124 VSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGSPPY 179
Query: 432 LAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
APE+ F GK PE DV+S G++ + G
Sbjct: 180 AAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 378 L---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
L T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 112 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 307 FSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG 365
KE ++ K E + L E + RH L L+ + L V EY G L +
Sbjct: 181 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 240
Query: 366 KGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLGLARL 414
+ + + R + + SAL YLH E K +V+ + + ++ D GL +
Sbjct: 241 RERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298
Query: 415 IQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
D GTP YLAPEV D + G+V E+ CGR
Sbjct: 299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLD--- 370
E E+ E T+ +L H LV+ G C + + +V EY++NG L ++ GKG
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL 106
Query: 371 WKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAG 427
+ Y + G+A + ++H + + + + ++ D G+ R + +D V+++
Sbjct: 107 LEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166
Query: 428 TP-GYLAPEVSFSGKATPEFDVYSFGMVALEV-ACGRRSKGLFEENSLV 474
P + APEV K + + DV++FG++ EV + G+ L+ + +V
Sbjct: 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV 215
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 378 L---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
L T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 307 FSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG 365
KE ++ K E + L E + RH L L+ + L V EY G L +
Sbjct: 184 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 243
Query: 366 KGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLGLARL 414
+ + + R + + SAL YLH E K +V+ + + ++ D GL +
Sbjct: 244 RERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKE 301
Query: 415 IQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
D GTP YLAPEV D + G+V E+ CGR
Sbjct: 302 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 116 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTR 374
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 375 YKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 127 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 183
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 184 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL 378
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 379 ---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 113 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 346 EHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS----- 400
+ L +V EY+A GSL + + +D + AL +LH ++H
Sbjct: 90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDN 146
Query: 401 -----EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
+ + +L D G I + + M GTP ++APEV P+ D++S G++A
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 456 LEVACGR 462
+E+ G
Sbjct: 207 IEMIEGE 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY 375
E+L E + ++H NLVQL G C ++ E+M G+L ++ + ++
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+ T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL 378
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 379 ---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 18/172 (10%)
Query: 303 ATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-D 361
A K L ++ E+ + L H N+V+L + L LV EY + G + D
Sbjct: 43 AVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 362 LFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGL 411
+ G + K + SA+ Y H+ K IVH ++ N ++ D G
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 412 ARLIQNDACVTTMMAGTPGYLAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
+ + T G+P Y APE+ F GK PE DV+S G++ + G
Sbjct: 160 SNEFTFGNKLDT-FCGSPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 378 L---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
L T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 84/207 (40%), Gaps = 59/207 (28%)
Query: 68 PPLNKVGRVLFHQPVLAWP------AMFTTTFTVRISK-FPDATGSGDGMAFVMAQDNKP 120
P N GR L+ +PV W A F T F+ I + FP DG+ F +A
Sbjct: 41 PTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFPRP-HPADGLVFFIA----- 94
Query: 121 PPPNGY----GSYLGIMDKSTQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTS-MATPV 175
PPN G Y GI + + V AVE DT+ N + P HIG+D S ++T
Sbjct: 95 -PPNTQTGEGGGYFGIYNPLSPYPFV---AVEFDTFRNTWD-PQIPHIGIDVNSVISTKT 149
Query: 176 AAKSLNSTGIDLKSGRNITVKID------------------------YDGAKTVPNAVYV 211
+L++ GI N+ +K D D + +P +V V
Sbjct: 150 VPFTLDNGGI-----ANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNV 204
Query: 212 GFTASTG-------LLQESHQLLDRVF 231
GF+A+TG E+H +L F
Sbjct: 205 GFSAATGDPSGKQRNATETHDILSWSF 231
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL 378
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 379 ---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 113 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L LV EY + G + D + G + K +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SA+ Y H+ K IVH ++ N ++ D G + + T G+P Y
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPY 178
Query: 432 LAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
APE+ F GK PE DV+S G++ + G
Sbjct: 179 AAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
E+L E + ++H NLVQL G C +V EYM G+L ++ + + T +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 378 L---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
L T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 133 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE + + DV++FG++ E+A
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 225
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 84/207 (40%), Gaps = 59/207 (28%)
Query: 68 PPLNKVGRVLFHQPVLAWP------AMFTTTFTVRISK-FPDATGSGDGMAFVMAQDNKP 120
P N GR L+ +PV W A F T F+ I + FP DG+ F +A
Sbjct: 42 PTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFPRP-HPADGLVFFIA----- 95
Query: 121 PPPNGY----GSYLGIMDKSTQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTS-MATPV 175
PPN G Y GI + + V AVE DT+ N + P HIG+D S ++T
Sbjct: 96 -PPNTQTGEGGGYFGIYNPLSPYPFV---AVEFDTFRNTWD-PQIPHIGIDVNSVISTKT 150
Query: 176 AAKSLNSTGIDLKSGRNITVKID------------------------YDGAKTVPNAVYV 211
+L++ GI N+ +K D D + +P +V V
Sbjct: 151 VPFTLDNGGI-----ANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNV 205
Query: 212 GFTASTG-------LLQESHQLLDRVF 231
GF+A+TG E+H +L F
Sbjct: 206 GFSAATGDPSGKQRNATETHDILSWSF 232
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLAEICTIGR-LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL +RE ++ +I R L H+++V G+ + + + +V E SL
Sbjct: 50 KSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR 109
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY L + YLH ++H + + ++GD GLA +
Sbjct: 110 KALTEPEARY-YLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D ++ GTP Y+APEV + E DV+S G + + G+
Sbjct: 166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ E++ GSL ++ K
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIK 118
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + + I+ +E ++GD GL +++ D
Sbjct: 119 LLQYTS--QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK--EXX 174
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL 378
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 379 ---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
E+L E + ++H NLVQL G C ++ E+M G+L ++ + + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 378 L---TGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTM 424
L T ++SA+ YL + K +H + ++ D GL+RL+ D
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 425 MAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
A P + APE K + + DV++FG++ E+A
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLAEICTIGR-LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL +RE ++ +I R L H+++V G+ + + + +V E SL
Sbjct: 56 KSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR 115
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY L + YLH ++H + + ++GD GLA +
Sbjct: 116 KALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E DV+S G + + G+
Sbjct: 172 EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 345 REHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD-----KPIVHH 399
R LLV EY NGSL ++ DW + ++ + L YLH E KP + H
Sbjct: 84 RMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH 143
Query: 400 SEYNAR-----------LGDLGLA------RLI----QNDACVTTMMAGTPGYLAPEVSF 438
+ N+R + D GL+ RL+ +++A ++ + GT Y+APEV
Sbjct: 144 RDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV--GTIRYMAPEVLE 201
Query: 439 SG-------KATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDY 476
A + D+Y+ G++ E+ R LF S+ +Y
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIFM--RCTDLFPGESVPEY 244
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L LV EY + G + D + G + K +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SA+ Y H+ K IVH ++ N ++ D G + + T G+P Y
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPY 178
Query: 432 LAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
APE+ F GK PE DV+S G++ + G
Sbjct: 179 AAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLAEICTIGR-LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL +RE ++ +I R L H+++V G+ + + + +V E SL
Sbjct: 52 KSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR 111
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY L + YLH ++H + + ++GD GLA +
Sbjct: 112 KALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E DV+S G + + G+
Sbjct: 168 EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 84/207 (40%), Gaps = 59/207 (28%)
Query: 68 PPLNKVGRVLFHQPVLAWP------AMFTTTFTVRISK-FPDATGSGDGMAFVMAQDNKP 120
P N GR L+ +PV W A F T F+ I + FP DG+ F +A
Sbjct: 41 PTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFPRP-HPADGLVFFIA----- 94
Query: 121 PPPNGY----GSYLGIMDKSTQDGVVRQLAVELDTYMNEYMIPDGNHIGVDTTS-MATPV 175
PPN G Y GI + + V AVE DT+ N + P HIG+D S ++T
Sbjct: 95 -PPNTQTGEGGGYFGIYNPLSPYPFV---AVEFDTFRNTWD-PQIPHIGIDVNSVISTKT 149
Query: 176 AAKSLNSTGIDLKSGRNITVKID------------------------YDGAKTVPNAVYV 211
+L++ GI N+ +K D D + +P +V V
Sbjct: 150 VPFTLDNGGI-----ANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNV 204
Query: 212 GFTASTG-------LLQESHQLLDRVF 231
GF+A+TG E+H +L F
Sbjct: 205 GFSAATGDPSGKQRNATETHDILSWSF 231
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLAEICTIGR-LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL +RE ++ +I R L H+++V G+ + + + +V E SL
Sbjct: 52 KSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR 111
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY L + YLH ++H + + ++GD GLA +
Sbjct: 112 KALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E DV+S G + + G+
Sbjct: 168 EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---------GFLD 370
+LAE + L+H LV+L +E + ++ E+MA GSL F+ +D
Sbjct: 57 FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ + Y+H + I+ + ++ D GLAR+I+++ A P
Sbjct: 116 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 175
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE G T + DV+SFG++ +E+
Sbjct: 176 IKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 309 KENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG 367
K +L + RE L E+ + +H+N+V++ + L +V E++ G+L +
Sbjct: 183 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 242
Query: 368 FLDWKTRYKILTGLASALLYLHEE--------CDKPIVHHSEYNARLGDLGLARLIQNDA 419
++ + + + AL LH + D ++ H + +L D G + +
Sbjct: 243 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEV 301
Query: 420 CVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ PE D++S G++ +E+ G
Sbjct: 302 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGSLDLFIGK--------G 367
R++ EI + L+H N+V+ +G C+ R +L L+ EY+ GSL ++ K
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 116
Query: 368 FLDWKTRYKILTGLA--SALLYLHEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTM 424
L + + +I G+ Y+H + I+ +E ++GD GL +++ D
Sbjct: 117 LLQYTS--QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDK--EYY 172
Query: 425 MAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
PG + APE K + DV+SFG+V E+
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 38/207 (18%)
Query: 68 PPLNKV-GRVLFHQPVLAWP------AMFTTTFTVRIS---KFPDATGSGDGMAFVMAQD 117
P +N+ L+ PV W A F T+F+ +S ++P DG+ F +A
Sbjct: 34 PLVNRTTSHALYATPVPIWDSATGNVASFITSFSFIVSNVQRYPPT----DGVVFFLAPW 89
Query: 118 NKPPPPNGYGSYLGIMDKSTQDGVVRQLAVELDTYMNEYMIPD--GNHIGVDTTSMATPV 175
PPN G YLGI D S + +AVE D++ N + +HIG+D S+ +
Sbjct: 90 GTEIPPNSQGGYLGITDSSNSQN--QFVAVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLK 147
Query: 176 AAK------SLNSTGI----DLK---------SGRNITVKIDYDGAKTVPNAVYVGFTAS 216
A SL I D K +G+ T+ + D +P V VGF+A+
Sbjct: 148 AVNWNRVSGSLEKATIIYDSDTKILTVVMTHQNGQITTISQEIDLKTVLPEKVSVGFSAT 207
Query: 217 T-GLLQESHQLLDRVFVSFPIEFDEKG 242
T +E H + F S E +E+
Sbjct: 208 TWNPERERHDIYSWSFTSTLKEPEEQA 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 308 SKENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
K +L + RE L E+ + +H+N+V++ + L +V E++ G+L +
Sbjct: 60 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 119
Query: 367 GFLDWKTRYKILTGLASALLYLHEE--------CDKPIVHHSEYNARLGDLGLARLIQND 418
++ + + + AL LH + D ++ H + +L D G + +
Sbjct: 120 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKE 178
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ PE D++S G++ +E+ G
Sbjct: 179 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEE---------CDKPIVH 398
L ++ EY+ GS + G LD IL + L YLH E + +
Sbjct: 95 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 154
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
H E +L D G+A + + GTP ++APEV + D++S G+ A+E+
Sbjct: 155 HGE--VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
Query: 459 ACGR 462
A G
Sbjct: 213 ARGE 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----GKGFLDWKTR 374
+L E + L+H LV+L E + ++ EYMA GSL F+ GK L
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID 114
Query: 375 Y--KILTGLA--SALLYLHEECDKPIVHHSE-YNARLGDLGLARLIQNDACVTTMMAGTP 429
+ +I G+A Y+H + V SE ++ D GLAR+I+++ A P
Sbjct: 115 FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 174
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE G T + DV+SFG++ E+
Sbjct: 175 IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 323 EICTIGRLRHKNLVQLRGWCHERE-----HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
E+ ++ ++H+N++Q G +R L L+ + GSL F+ + W I
Sbjct: 68 EVYSLPGMKHENILQFIG-AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHI 126
Query: 378 LTGLASALLYLHEEC------DKPIVHHSEYNAR-----------LGDLGLARLIQ--ND 418
+A L YLHE+ KP + H + ++ + D GLA +
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 419 ACVTTMMAGTPGYLAPEV-----SFSGKATPEFDVYSFGMVALEVA 459
A T GT Y+APEV +F A D+Y+ G+V E+A
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---------GFLD 370
+LAE + L+H LV+L +E + ++ E+MA GSL F+ +D
Sbjct: 230 FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ + Y+H + I+ + ++ D GLAR+I+++ A P
Sbjct: 289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE G T + DV+SFG++ +E+
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 309 KENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG 367
K +L + RE L E+ + +H+N+V++ + L +V E++ G+L +
Sbjct: 63 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 122
Query: 368 FLDWKTRYKILTGLASALLYLHEE--------CDKPIVHHSEYNARLGDLGLARLIQNDA 419
++ + + + AL LH + D ++ H + +L D G + +
Sbjct: 123 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEV 181
Query: 420 CVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ PE D++S G++ +E+ G
Sbjct: 182 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 323 EICTIGRLRHKNLVQLRGWCHER--EHLLLVYEYMANGSLDLFI--GKGFLDWKTRYKIL 378
EI + L H+N+V+ +G C E + L+ E++ +GSL ++ K ++ K + K
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 379 TGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG- 430
+ + YL H + + ++ SE+ ++GD GL + I+ D T+
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 431 --YLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE K DV+SFG+ E+
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF-IGKGFLDWKTRYKILT 379
+ EI + L+H N+V+L H ++ L+LV+E++ L + +G L+ T L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 380 GLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
L + + Y H D+ ++H + E ++ D GLAR T T
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 430 GYLAPEVSF-SGKATPEFDVYSFGMVALEVACG 461
Y AP+V S K + D++S G + E+ G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF-IGKGFLDWKTRYKILT 379
+ EI + L+H N+V+L H ++ L+LV+E++ L + +G L+ T L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 380 GLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
L + + Y H D+ ++H + E ++ D GLAR T T
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 430 GYLAPEVSF-SGKATPEFDVYSFGMVALEVACG 461
Y AP+V S K + D++S G + E+ G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEE---------CDKPIVH 398
L ++ EY+ GS + G LD IL + L YLH E + +
Sbjct: 80 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
H E +L D G+A + + GTP ++APEV + D++S G+ A+E+
Sbjct: 140 HGE--VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
Query: 459 ACGR 462
A G
Sbjct: 198 ARGE 201
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 308 SKENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
K +L + RE L E+ + +H+N+V++ + L +V E++ G+L +
Sbjct: 105 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 164
Query: 367 GFLDWKTRYKILTGLASALLYLHEE--------CDKPIVHHSEYNARLGDLGLARLIQND 418
++ + + + AL LH + D ++ H + +L D G + +
Sbjct: 165 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKE 223
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ PE D++S G++ +E+ G
Sbjct: 224 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEE---------CDKPIVH 398
L ++ EY+ GS + G LD IL + L YLH E + +
Sbjct: 100 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 159
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
H E +L D G+A + + GTP ++APEV + D++S G+ A+E+
Sbjct: 160 HGE--VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 217
Query: 459 ACGR 462
A G
Sbjct: 218 ARGE 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEE---------CDKPIVH 398
L ++ EY+ GS + G LD IL + L YLH E + +
Sbjct: 80 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
H E +L D G+A + + GTP ++APEV + D++S G+ A+E+
Sbjct: 140 HGE--VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
Query: 459 ACGR 462
A G
Sbjct: 198 ARGE 201
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 31/182 (17%)
Query: 322 AEICTIGRLRHKNLV-----QLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYK 376
EI +RH+N++ ++G L L+ +Y NGSL ++ LD K+ K
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKG-TGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK 138
Query: 377 ILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDLGLARLIQNDACV 421
+ S L +LH E KP + H + ++ + DLGLA +D
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198
Query: 422 TTM----MAGTPGYLAPEVSFSGKATPEF------DVYSFGMVALEVACGRRSKGLFEEN 471
+ GT Y+ PEV F D+YSFG++ EVA S G+ EE
Sbjct: 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258
Query: 472 SL 473
L
Sbjct: 259 QL 260
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 309 KENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG 367
K +L + RE L E+ + +H+N+V++ + L +V E++ G+L +
Sbjct: 56 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 115
Query: 368 FLDWKTRYKILTGLASALLYLHEE--------CDKPIVHHSEYNARLGDLGLARLIQNDA 419
++ + + + AL LH + D ++ H + +L D G + +
Sbjct: 116 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEV 174
Query: 420 CVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ PE D++S G++ +E+ G
Sbjct: 175 PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L L+ EY + G + D + G + K +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM---AGT 428
SA+ Y H+ K IVH ++ N ++ D G + N+ V + G
Sbjct: 124 VSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDAFCGA 176
Query: 429 PGYLAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
P Y APE+ F GK PE DV+S G++ + G
Sbjct: 177 PPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 308 SKENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK 366
K +L + RE L E+ + +H+N+V++ + L +V E++ G+L +
Sbjct: 51 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 110
Query: 367 GFLDWKTRYKILTGLASALLYLHEE--------CDKPIVHHSEYNARLGDLGLARLIQND 418
++ + + + AL LH + D ++ H + +L D G + +
Sbjct: 111 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKE 169
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ PE D++S G++ +E+ G
Sbjct: 170 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 323 EICTIGRLRHKNLVQLRGWCHER--EHLLLVYEYMANGSLDLFI--GKGFLDWKTRYKIL 378
EI + L H+N+V+ +G C E + L+ E++ +GSL ++ K ++ K + K
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 379 TGLASALLYL------HEE-CDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG- 430
+ + YL H + + ++ SE+ ++GD GL + I+ D T+
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 431 --YLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE K DV+SFG+ E+
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF-IGKGFLDWKTRYKILT 379
+ EI + L+H N+V+L H ++ L+LV+E++ L + +G L+ T L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 380 GLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
L + + Y H D+ ++H + E ++ D GLAR T T
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 430 GYLAPEVSF-SGKATPEFDVYSFGMVALEVACG 461
Y AP+V S K + D++S G + E+ G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N + + K+LQ +T +E+L R++ EI + L+H N+V+ +G C+ R +
Sbjct: 40 NTGEVVAVKKLQHST----EEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 90
Query: 348 LLLVYEYMANGSLDLFIGK--------GFLDWKTRYKILTGLA--SALLYLHEE-CDKPI 396
L L+ EY+ GSL ++ L + + +I G+ Y+H + + I
Sbjct: 91 LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDLATRNI 148
Query: 397 VHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSF 451
+ +E ++GD GL +++ D PG + APE K + DV+SF
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDK--EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
Query: 452 GMVALEV 458
G+V E+
Sbjct: 207 GVVLYEL 213
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 39 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 98
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 99 FHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG 155
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 156 LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 94 FHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 94 FHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 151 LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 37 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 96
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 97 FHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG 153
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 154 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 284 RARSAANVPILFSYKQLQKA--THNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGW 341
R + AN +F+ K L+KA N +K+ K ER L E+ +H +V L
Sbjct: 37 RKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEV------KHPFIVDLIYA 89
Query: 342 CHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD-----KP 395
L L+ EY++ G L + + + G T L ++ AL +LH++ KP
Sbjct: 90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKP 149
Query: 396 --IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGM 453
I+ + + + +L D GL + +D VT GT Y+APE+ D +S G
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 454 VALEVACG 461
+ ++ G
Sbjct: 210 LMYDMLTG 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 94 FHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 151 LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 94 FHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 284 RARSAANVPILFSYKQLQKA--THNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGW 341
R + AN +F+ K L+KA N +K+ K ER L E+ +H +V L
Sbjct: 37 RKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEV------KHPFIVDLIYA 89
Query: 342 CHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD-----KP 395
L L+ EY++ G L + + + G T L ++ AL +LH++ KP
Sbjct: 90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKP 149
Query: 396 --IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGM 453
I+ + + + +L D GL + +D VT GT Y+APE+ D +S G
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 454 VALEVACG 461
+ ++ G
Sbjct: 210 LMYDMLTG 217
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 93/222 (41%), Gaps = 33/222 (14%)
Query: 42 DLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP------AMFTTTFTV 95
+LI G N + LT S P + VGR+LF V W A F + F+
Sbjct: 17 NLIFQGDAQIKNNAVQLTKTD-SNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSF 75
Query: 96 RISKFPDATGSGDGMAFVMAQ-DNKPPPPNGYGSYLGIMDKSTQDGVVRQ-LAVELDTYM 153
+ K P + G+ DG+AF +A D P +G G + Q+ Q +AVE DT+
Sbjct: 76 SL-KSPLSNGA-DGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFY 133
Query: 154 NE---YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLK-------SGRNITVKIDY-DGA 202
+ P+ HIG+D S+ + K G L S RN+ V Y DG
Sbjct: 134 AQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRNLDVVATYSDGT 193
Query: 203 K-----------TVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ +P V VGF+A++G ++H L F S
Sbjct: 194 RYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTS 235
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 42 DLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP------AMFTTTFTV 95
+LI G N + LT + S P + VGR+LF V W A F + F+
Sbjct: 17 NLIFQGDAQIKNNAVQLT-KTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSF 75
Query: 96 RISKFPDATGSGDGMAFVMAQ-DNKPPPPNGYGSYLGIMDKSTQDGVVRQ-LAVELDTYM 153
+ K P + G+ DG+AF +A D P +G G + Q+ Q +AVE DT+
Sbjct: 76 SL-KSPLSNGA-DGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFY 133
Query: 154 NE---YMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLK-------SGRNITVKIDY-DGA 202
+ P+ HIG+D S+ + K G L S RN+ V Y DG
Sbjct: 134 AQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRNLDVVATYSDGT 193
Query: 203 K-----------TVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ +P V VGF+A++G ++H L F S
Sbjct: 194 RYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTS 235
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 303 ATHNFSKENLLGKGEREY-LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A KE ++ K E + + E + RH L L+ + L V EY G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93
Query: 362 LFIGKGFLDWKTRYKILTG-LASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + + + R + + SAL YLH + +V+ + + ++ D G
Sbjct: 94 FHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
L + +D GTP YLAPEV D + G+V E+ CGR
Sbjct: 151 LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 329 RLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG---KGFLDWKTRY---KILTGLA 382
+L+H ++++L + + ++ LV E NG ++ ++ K F + + R+ +I+TG+
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM- 125
Query: 383 SALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMMAGTPGYL 432
LYLH I+H N ++ D GLA ++ + GTP Y+
Sbjct: 126 ---LYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYI 179
Query: 433 APEVSFSGKATPEFDVYSFGMVALEVACGR 462
+PE++ E DV+S G + + GR
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARL------IQNDACVTTMMAG 427
+T LA+AL Y H K ++H N LG G ++ + + T + G
Sbjct: 138 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 194
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
T YL PE+ + D++S G++ E G K FE N+
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 303 ATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-D 361
A K L ++ E+ + L H N+V+L + L LV EY + G + D
Sbjct: 43 AVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 362 LFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGL 411
+ G + K + SA+ Y H+ K IVH ++ N ++ D G
Sbjct: 103 YLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 412 ARLIQNDACVTTMM---AGTPGYLAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
+ N+ + G+P Y APE+ F GK PE DV+S G++ + G
Sbjct: 160 S----NEFTFGNKLDEFCGSPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS-LDLFIGKGFLDWKTRYKILTGL 381
EI + + + + G + L ++ EY+ GS LDL F +++ +L +
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-TMLKEI 129
Query: 382 ASALLYLHEECD-------KPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAP 434
L YLH E ++ + + +L D G+A + + GTP ++AP
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 435 EVSFSGKATPEFDVYSFGMVALEVACGR 462
EV + D++S G+ A+E+A G
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 45/239 (18%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
F NF+ NG DL G+ + G L L + + LP + R + P+ W
Sbjct: 8 FKNFS----QNGKDLSFQGNASVIETGVLQLN-KVGNNLPDETGGIARYI--APIHIWNC 60
Query: 87 -----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPP--PPNGYGSYLGIMDKSTQD 139
A F T+F+ + + + DG+ F +A PP P G Y G+ + + D
Sbjct: 61 NTGELASFITSFSFFMETSANPKAATDGLTFFLA----PPDSPLRRAGGYFGLFNDTKCD 116
Query: 140 GVVRQLAVELDTYMN--EYMIPDGNHIGVDTTSMATPVAAK-----SLNSTG----IDLK 188
+ +AVE DT + + P HIG+D + + A + LN+ I
Sbjct: 117 SSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEA 176
Query: 189 SGRNITVKIDYDGAKT-------------VPNAVYVGFTASTGL-LQESHQLLDRVFVS 233
S + +T + Y +T +P V VGF+ ST + Q +H++L+ F S
Sbjct: 177 SSKTLTASLTYPSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTS 235
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms
Length = 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPQGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K PD+ DG+AF ++ + P G LG+
Sbjct: 185 SAVVASFEATFTFLI-KSPDS-HPADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTG------------------- 184
+AVELDTY N + P HIG+D S+ + AK G
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native
Concanavalin A Using Rapid Laue Data Collection Methods
And The Introduction Of A Monochromatic Large-Angle
Oscillation Technique (Lot)
pdb|1CON|A Chain A, The Refined Structure Of Cadmium Substituted Concanavalin
A At 2.0 Angstroms Resolution
pdb|5CNA|A Chain A, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|B Chain B, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|C Chain C, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|D Chain D, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|1APN|A Chain A, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1APN|B Chain B, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1CVN|A Chain A, Concanavalin A Complexed To Trimannoside
pdb|1CVN|B Chain B, Concanavalin A Complexed To Trimannoside
pdb|1CVN|C Chain C, Concanavalin A Complexed To Trimannoside
pdb|1CVN|D Chain D, Concanavalin A Complexed To Trimannoside
pdb|1ENS|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENS|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENQ|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|B Chain B, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|C Chain C, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|D Chain D, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1CES|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1CES|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1VAL|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAM|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VLN|A Chain A, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|B Chain B, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|C Chain C, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|D Chain D, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|E Chain E, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|F Chain F, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|G Chain G, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|H Chain H, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1GIC|A Chain A, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1GIC|B Chain B, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1TEI|A Chain A, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|B Chain B, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|C Chain C, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|D Chain D, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|E Chain E, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|F Chain F, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|G Chain G, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|H Chain H, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1ONA|A Chain A, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|B Chain B, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|C Chain C, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|D Chain D, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1CJP|A Chain A, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|B Chain B, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|C Chain C, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|D Chain D, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1BXH|A Chain A, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|B Chain B, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|C Chain C, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|D Chain D, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1QGL|A Chain A, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QGL|B Chain B, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QDC|A Chain A, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|B Chain B, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|C Chain C, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|D Chain D, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|A Chain A, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|B Chain B, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|C Chain C, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|D Chain D, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1DQ0|A Chain A, Locked, Metal-Free Concanavalin A, A Minor Species In
Solution
pdb|1DQ1|A Chain A, Calcium;calcium Concanavalin A
pdb|1DQ2|A Chain A, Unlocked Metal-Free Concanavalin A
pdb|1DQ2|B Chain B, Unlocked Metal-Free Concanavalin A
pdb|1DQ4|A Chain A, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ4|B Chain B, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ5|A Chain A, Manganese;manganese Concanavalin A At Ph 5.0
pdb|1DQ6|A Chain A, Manganese;manganese Concanavalin A At Ph 7.0
pdb|1QNY|A Chain A, X-Ray Refinement Of D2o Soaked Crystal Of Concanavalin A
pdb|1C57|A Chain A, Direct Determination Of The Positions Of Deuterium Atoms
Of Bound Water In Concanavalin A By Neutron Laue
Crystallography
pdb|3ENR|A Chain A, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|3ENR|B Chain B, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|1I3H|A Chain A, Concanavalin A-Dimannose Structure
pdb|1GKB|A Chain A, Concanavalin A, New Crystal Form
pdb|1GKB|B Chain B, Concanavalin A, New Crystal Form
pdb|1JW6|A Chain A, Crystal Structure Of The Complex Of Concanavalin A And
Hexapeptide
pdb|1JOJ|A Chain A, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|B Chain B, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|C Chain C, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|D Chain D, Concanavalin A-Hexapeptide Complex
pdb|1JUI|A Chain A, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|B Chain B, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|C Chain C, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|D Chain D, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JYC|A Chain A, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|B Chain B, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|C Chain C, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|D Chain D, Concanavalin A15-Mer Peptide Complex
pdb|1JYI|A Chain A, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|B Chain B, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|C Chain C, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|D Chain D, Concanavalin A/12-mer Peptide Complex
pdb|1JN2|P Chain P, Crystal Structure Of Meso-Tetrasulphonatophenyl Porphyrin
Complexed With Concanavalin A
pdb|1HQW|A Chain A, Crystal Structure Of The Complex Of Concanavalin A With A
Tripeptide Ypy
pdb|1NXD|1 Chain 1, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|2 Chain 2, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|3 Chain 3, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|4 Chain 4, Crystal Structure Of Mnmn Concanavalin A
pdb|1XQN|A Chain A, The 15k Neutron Structure Of Saccharide-Free Concanavalin
A
pdb|2A7A|A Chain A, On The Routine Use Of Soft X-Rays In Macromolecular
Crystallography, Part Iii- The Optimal Data Collection
Wavelength
pdb|2G4I|A Chain A, Anomalous Substructure Of Concanavalin A
pdb|1ENR|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc And
Calcium Having A Zinc Ion Bound In The S1 Site And A
Calcium Ion Bound In The S2 Site
pdb|1JBC|A Chain A, Concanavalin A
pdb|1NLS|A Chain A, Concanavalin A And Its Bound Solvent At 0.94a Resolution
pdb|1SCR|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|1SCS|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|2ENR|A Chain A, Co-crystals Of Demetallized Concanavalin A With Cadmium
Having A Cadmium Ion Bound In Both The S1 Site And The
S2 Site
pdb|2UU8|A Chain A, X-Ray Structure Of Ni, Ca Concanavalin A At Ultra-High
Resolution (0.94a)
pdb|3D4K|A Chain A, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|B Chain B, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|C Chain C, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|D Chain D, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3NWK|A Chain A, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|B Chain B, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|C Chain C, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|D Chain D, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3QLQ|A Chain A, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|B Chain B, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|C Chain C, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|D Chain D, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
Length = 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPQGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K PD+ DG+AF ++ + P G LG+
Sbjct: 185 SAVVASFEATFTFLI-KSPDS-HPADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKSLNSTG------------------- 184
+AVELDTY N + P HIG+D S+ + AK G
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ + L H N+V+L + L LV EY + G + D + G + K +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
SA+ Y H+ K IVH ++ N ++ D G + + G P Y
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA-FCGAPPY 178
Query: 432 LAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
APE+ F GK PE DV+S G++ + G
Sbjct: 179 AAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G + + K D +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 171
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl)
In Complex With Man1-2man-Ome
Length = 237
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPQGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K PD+ DG+AF ++ + P G LG+
Sbjct: 185 SAVVASFDATFTFLI-KSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKS-------------LNSTGIDLKS- 189
+AVELDTY N + PD HIG+D S+ + AK NS G L +
Sbjct: 5 VAVELDTYPNTDIGDPDYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin
Length = 237
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ TFN F N DLI G T +G L LT + S+ P N VGR LF+ PV
Sbjct: 125 SLHFTFNQF----SQNPKDLILQGDATTDSDGNLELT-KVSSSGDPQGNSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDR-DPADGITFFIANPDTSIPSGSGGRLLGLF 233
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELD+Y N + P+ HIG+D S+ + A+ S NS L +
Sbjct: 5 VAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTVHISYNSVAKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARL------IQNDACVTTMMAG 427
+T LA+AL Y H K ++H N LG G ++ + + T + G
Sbjct: 129 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 185
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
T YL PE+ + D++S G++ E G+
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|D Chain D, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|G Chain G, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|J Chain J, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|2D7F|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|F Chain F, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|L Chain L, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|S Chain S, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2EF6|A Chain A, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|B Chain B, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|C Chain C, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|D Chain D, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2P2K|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|B Chain B, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|C Chain C, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|D Chain D, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
Length = 237
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPQGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K PD+ DG+AF ++ + P G LG+
Sbjct: 185 SAVVASFDATFTFLI-KSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKS-------------LNSTGIDLKS- 189
+AVELDTY N + P+ HIG+D S+ + AK NS G L +
Sbjct: 5 VAVELDTYPNTDIGDPNYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---G 365
KE L + ERE + +L H+N+V + E + LV EY+ +L +I G
Sbjct: 51 KEETLKRFERE----VHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG 106
Query: 366 KGFLDWKTRY--KILTGLASA--LLYLHEECDKP--IVHHSEYNARLGDLGLAR-LIQND 418
+D + +IL G+ A + +H + KP I+ S ++ D G+A+ L +
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHDMRIVHRDI-KPQNILIDSNKTLKIFDFGIAKALSETS 165
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPE-FDVYSFGMVALEVACGR 462
T + GT Y +PE + G+AT E D+YS G+V E+ G
Sbjct: 166 LTQTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 316 GEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI----------- 364
+++ E + L+H+++V+ G C + + L++V+EYM +G L+ F+
Sbjct: 60 ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 365 ------GKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGD 408
KG L I + +AS ++YL + VH + ++GD
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGD 176
Query: 409 LGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
G++R + D P ++ PE K T E DV+SFG++ E+
Sbjct: 177 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 169
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 313 LGKGERE-YLAEICTIGRLRHKNLVQL-RGW---CHEREHLLLVYEYMANGSLDLFIGKG 367
L K ER+ + E + L+H N+V+ W ++ ++LV E +G+L ++ +
Sbjct: 64 LTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF 123
Query: 368 FLDWKTRYKILTGLASALL----YLHE----------ECDKPIVHHSEYNARLGDLGLAR 413
+ + K+L +L +LH +CD + + ++GDLGLA
Sbjct: 124 KV---XKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
Query: 414 LIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
L A + GTP + APE + K DVY+FG LE A
Sbjct: 181 L--KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXA 223
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARL------IQNDACVTTMMAG 427
+T LA+AL Y H K ++H N LG G ++ + + T + G
Sbjct: 114 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCG 170
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
T YL PE+ + D++S G++ E G+
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 171
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + EI LRH N++++ + H+R+ + L+ E+ G L + K G D +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 376 KILTGLASALLYLHEECDKPIVHHSEYNARL-----GDLGLARL---IQNDACVTTMMAG 427
+ LA AL Y HE + ++H L G+L +A + + M G
Sbjct: 119 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG 175
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
T YL PE+ + D++ G++ E G
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|B Chain B, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|C Chain C, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|D Chain D, Concanavalin From Canavalia Brasiliensis
pdb|3JU9|A Chain A, Crystal Structure Of A Lectin From Canavalia Brasiliensis
Seed (conbr) Complexed With Alpha-aminobutyric Acid
pdb|4H55|A Chain A, Crystal Structure Of Canavalia Brasiliensis Seed Lectin
(Conbr) In Complex With Beta-D-Ribofuranose
Length = 237
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAGN-GYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTEGNLRLT-RVSSNGSPQGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K PD+ DG+AF ++ + P G LG+
Sbjct: 185 SAVVASFEATFTFLI-KSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKS-------------LNSTGIDLKS- 189
+AVELDTY N + P HIG+D S+ + AK NS G L +
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum
Seeds In Complex With
5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose
Length = 236
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSV-TAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ TFN F + DLI G T +G L LT S P N VGR L++ PV
Sbjct: 125 SLHFTFNQF----SQSPKDLILQGDASTDSDGNLQLTR--VSNGSPQSNSVGRALYYAPV 178
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD + DG+AF +A + P G LG+
Sbjct: 179 HVWDKSAVVASFDATFTFLI-KSPD-SDPADGIAFFIANTDSSIPHGSGGRLLGLF 232
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELDTY N + P+ HIG++ S+ + + S NS L +
Sbjct: 5 VAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTRWNVQDGKVGTAHISYNSVAKRLSAI 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTG+ +E++ +L F S
Sbjct: 65 VSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGVYKETNTILSWSFTS 113
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + EI LRH N++++ + H+R+ + L+ E+ G L + K G D +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 376 KILTGLASALLYLHEECDKPIVHHSEYNARL-----GDLGLARL---IQNDACVTTMMAG 427
+ LA AL Y HE + ++H L G+L +A + + M G
Sbjct: 118 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG 174
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
T YL PE+ + D++ G++ E G
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + EI LRH N++++ + H+R+ + L+ E+ G L + K G D +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 376 KILTGLASALLYLHEECDKPIVHHSEYNARL-----GDLGLARL---IQNDACVTTMMAG 427
+ LA AL Y HE + ++H L G+L +A + + M G
Sbjct: 118 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG 174
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
T YL PE+ + D++ G++ E G
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 112 TYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAAL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVD 475
GT YL PE+ + D++S G++ E G K FE N+ D
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANTYQD 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARL------IQNDACVTTMMAG 427
+T LA+AL Y H K ++H N LG G ++ + + T + G
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCG 171
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
T YL PE+ + D++S G++ E G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
Length = 239
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMG-SVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +FN F N DLI G + T +G L LT + S+ P N VGR LF+ PV
Sbjct: 127 SLHFSFNQF----SQNPKDLILQGDAFTDSDGNLQLT-KVSSSGDPQGNSVGRALFYAPV 181
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 182 HIWEKSAVVASFDATFTFLI-KSPDRE-PADGITFFIANTDTSIPSGSGGRLLGLF 235
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P+ HIG+D S+ + A+ S NS
Sbjct: 7 VAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTVHISYNSVAKRLSAV 66
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 67 VSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 309 KENLLGKGEREYL-AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG 367
K +L + RE L E+ + H N+V + + L +V E++ G+L +
Sbjct: 77 KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHT 136
Query: 368 FLDWKTRYKILTGLASALLYLHEEC-------DKPIVHHSEYNARLGDLGLARLIQNDAC 420
++ + + + AL YLH + I+ S+ +L D G + +
Sbjct: 137 RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 196
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APEV E D++S G++ +E+ G
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTEL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 111 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 165
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 171
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE + D++S G++ E G+
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC +L+H N+V+L E LV++ + G L + + + F
Sbjct: 74 KLERE--ARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 129
Query: 374 RYKILTGLASALLYLHEECDKPIVHHS-------------EYNARLGDLGLARLIQNDAC 420
+ + ++ Y H IVH + +L D GLA + ND+
Sbjct: 130 ASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-NDSE 185
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV + D+++ G++
Sbjct: 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 53/240 (22%)
Query: 32 FNPDSCNNGNDLICMGSVT-AGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV------LA 84
FN ++ N N LI G T + G+L LT + + +GR + P+ +
Sbjct: 6 FNVETFNKTN-LILQGDATVSSEGHLLLT----NVKGNEEDSMGRAFYSAPIQINDRTID 60
Query: 85 WPAMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVRQ 144
A F+T FT RI+ + S G+AF + P G YLG+ + + D
Sbjct: 61 NLASFSTNFTFRINA-KNIENSAYGLAFALVPVGSRPKLKG--RYLGLFNTTNYDRDAHT 117
Query: 145 LAVELDTYMNEYMIPDGNHIGVDTTSMATPVAAKSLNSTGIDLKSGRNITVKIDYDGAK- 203
+AV DT N I +D S+ P+A +S N +G V+I YD K
Sbjct: 118 VAVVFDTV--------SNRIEIDVNSIR-PIATESCN---FGHNNGEKAEVRITYDSPKN 165
Query: 204 -------------------TVP------NAVYVGFTASTGLLQESHQLLDRVFVSFPIEF 238
TVP + V VGF+A++G +E+ + + + SF F
Sbjct: 166 DLRVSLLYPSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSNF 225
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 115
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 170
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD-------KPIVHHS 400
L ++ EY+ GS + G L+ IL + L YLH E ++
Sbjct: 92 LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE 151
Query: 401 EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
+ + +L D G+A + + GTP ++APEV + D++S G+ A+E+A
Sbjct: 152 QGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK 211
Query: 461 G 461
G
Sbjct: 212 G 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 43/199 (21%)
Query: 315 KGEREYL--AEICTIGRLRHKNLVQLRG--------WCHEREHLLLVYEYMANGSLDLFI 364
+ ER + AEI LRH+N++ W L LV +Y +GSL ++
Sbjct: 76 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ----LWLVSDYHEHGSLFDYL 131
Query: 365 GKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDL 409
+ + + K+ AS L +LH E KP + H + ++ + DL
Sbjct: 132 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191
Query: 410 GLARLIQNDACVTTM------MAGTPGYLAPEV---SFSGKATPEF---DVYSFGMVALE 457
GLA +++D+ T+ GT Y+APEV S + K F D+Y+ G+V E
Sbjct: 192 GLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
Query: 458 VACGRRSKGLFEENSLVDY 476
+A G+ E+ L Y
Sbjct: 250 IARRCSIGGIHEDYQLPYY 268
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----GKGFLDWKTR 374
+L E + L+H LV+L + E + ++ E+MA GSL F+ GK L
Sbjct: 54 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID 113
Query: 375 Y--KILTGLASALL--YLHEECDKPIVHHSE-YNARLGDLGLARLIQNDACVTTMMAGTP 429
+ +I G+A Y+H + V SE ++ D GLAR+I+++ A P
Sbjct: 114 FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 173
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE G T + +V+SFG++ E+
Sbjct: 174 IKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 169
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 109 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL 163
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 207
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|B Chain B, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|C Chain C, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|D Chain D, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3R|A Chain A, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|B Chain B, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|C Chain C, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|D Chain D, Cratylia Folibunda Seed Lectin At Acidic Ph
Length = 236
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSV-TAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ TFN F N DLI G T +G L LT S P N VGR L++ PV
Sbjct: 125 SLHFTFNQF----SQNPKDLILQGDASTDSDGNLQLTR--VSNGSPQSNSVGRALYYAPV 178
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K D+ DG+AF +A + P G LG+
Sbjct: 179 HVWDKSAVVASFDATFTFLI-KSTDS-DIADGIAFFIANTDSSIPHGSGGRLLGLF 232
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELDTY N + P+ HIG++ S+ + + S NS L +
Sbjct: 5 VAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTRWNVQDGKVGTAHISYNSVAKRLSAI 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + T +
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTL 167
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+GT YL PE+ + D++S G++ E G+
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 43/199 (21%)
Query: 315 KGEREYL--AEICTIGRLRHKNLVQLRG--------WCHEREHLLLVYEYMANGSLDLFI 364
+ ER + AEI LRH+N++ W L LV +Y +GSL ++
Sbjct: 63 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ----LWLVSDYHEHGSLFDYL 118
Query: 365 GKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDL 409
+ + + K+ AS L +LH E KP + H + ++ + DL
Sbjct: 119 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 178
Query: 410 GLARLIQNDACVTTM------MAGTPGYLAPEV---SFSGKATPEF---DVYSFGMVALE 457
GLA +++D+ T+ GT Y+APEV S + K F D+Y+ G+V E
Sbjct: 179 GLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
Query: 458 VACGRRSKGLFEENSLVDY 476
+A G+ E+ L Y
Sbjct: 237 IARRCSIGGIHEDYQLPYY 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDL 167
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTL 170
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GT YL PE+ + D++S G++ E G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDL 171
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 24/155 (15%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
E+ L H N+V+L + L LV EY + G + D + G K +
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 382 ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM---AGT 428
SA+ Y H+ K IVH ++ N ++ D G + N+ + G
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKIADFGFS----NEFTFGNKLDAFCGA 175
Query: 429 PGYLAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
P Y APE+ F GK PE DV+S G++ + G
Sbjct: 176 PPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + T +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 43/196 (21%)
Query: 315 KGEREYL--AEICTIGRLRHKNLVQLRG--------WCHEREHLLLVYEYMANGSLDLFI 364
+ ER + AEI LRH+N++ W L LV +Y +GSL ++
Sbjct: 37 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ----LWLVSDYHEHGSLFDYL 92
Query: 365 GKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDL 409
+ + + K+ AS L +LH E KP + H + ++ + DL
Sbjct: 93 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152
Query: 410 GLARLIQNDACVTTM------MAGTPGYLAPEV---SFSGKATPEF---DVYSFGMVALE 457
GLA +++D+ T+ GT Y+APEV S + K F D+Y+ G+V E
Sbjct: 153 GLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210
Query: 458 VACGRRSKGLFEENSL 473
+A G+ E+ L
Sbjct: 211 IARRCSIGGIHEDYQL 226
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 17/179 (9%)
Query: 293 ILFSYKQLQKATHNFSKENLLGKGEREYLAEI-CTIGRLRHKNLVQLRGWCHEREHLLLV 351
+ ++ K LQK K L K E+ ++E + ++H LV L + L V
Sbjct: 64 VFYAVKVLQK------KAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117
Query: 352 YEYMANGSLDLFIGKG--FLDWKTRYKILTGLASALLYLHE-----ECDKP--IVHHSEY 402
+Y+ G L + + FL+ + R+ +ASAL YLH KP I+ S+
Sbjct: 118 LDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLHSLNIVYRDLKPENILLDSQG 176
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ L D GL + T+ GTP YLAPEV D + G V E+ G
Sbjct: 177 HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 43/199 (21%)
Query: 315 KGEREYL--AEICTIGRLRHKNLVQLRG--------WCHEREHLLLVYEYMANGSLDLFI 364
+ ER + AEI LRH+N++ W L LV +Y +GSL ++
Sbjct: 38 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ----LWLVSDYHEHGSLFDYL 93
Query: 365 GKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDL 409
+ + + K+ AS L +LH E KP + H + ++ + DL
Sbjct: 94 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 153
Query: 410 GLARLIQNDACVTTM------MAGTPGYLAPEV---SFSGKATPEF---DVYSFGMVALE 457
GLA +++D+ T+ GT Y+APEV S + K F D+Y+ G+V E
Sbjct: 154 GLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 211
Query: 458 VACGRRSKGLFEENSLVDY 476
+A G+ E+ L Y
Sbjct: 212 IARRCSIGGIHEDYQLPYY 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC +L+H N+V+L E LV++ + G L + + + F
Sbjct: 51 KLERE--ARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 106
Query: 374 RYKILTGLASALLYLHEECDKPIVHHS-------------EYNARLGDLGLARLIQNDAC 420
+ + ++ Y H IVH + +L D GLA + ND+
Sbjct: 107 ASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-NDSE 162
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV + D+++ G++
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 196
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC +L+H N+V+L E LV++ + G L + + + F
Sbjct: 50 KLERE--ARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 105
Query: 374 RYKILTGLASALLYLHEECDKPIVHHS-------------EYNARLGDLGLARLIQNDAC 420
+ + ++ Y H IVH + +L D GLA + ND+
Sbjct: 106 ASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-NDSE 161
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV + D+++ G++
Sbjct: 162 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 195
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS-LDLF---IGKG-----FL 369
E L EI + + H N+V ++ L LV + ++ GS LD+ + KG L
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 370 DWKTRYKILTGLASALLYLHEECD-------KPIVHHSEYNARLGDLGLARLIQNDACVT 422
D T IL + L YLH+ I+ + + ++ D G++ + +T
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 423 -----TMMAGTPGYLAPEVSFSGKATP-EFDVYSFGMVALEVACG 461
GTP ++APEV + + D++SFG+ A+E+A G
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 343 HEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVH 398
H L L+ Y GSL ++ LD + +I+ +AS L +LH E KP +
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 164
Query: 399 HSEYNAR-----------LGDLGLARLIQNDACVTTM----MAGTPGYLAPEVSFSGKAT 443
H + ++ + DLGLA + + GT Y+APEV
Sbjct: 165 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 224
Query: 444 PEF------DVYSFGMVALEVACGRRSKGLFEE 470
F D+++FG+V EVA S G+ E+
Sbjct: 225 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 257
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 343 HEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVH 398
H L L+ Y GSL ++ LD + +I+ +AS L +LH E KP +
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 399 HSEYNAR-----------LGDLGLARLIQNDACVTTM----MAGTPGYLAPEVSFSGKAT 443
H + ++ + DLGLA + + GT Y+APEV
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 444 PEF------DVYSFGMVALEVACGRRSKGLFEE 470
F D+++FG+V EVA S G+ E+
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 343 HEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVH 398
H L L+ Y GSL ++ LD + +I+ +AS L +LH E KP +
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 399 HSEYNAR-----------LGDLGLARLIQNDACVTTM----MAGTPGYLAPEVSFSGKAT 443
H + ++ + DLGLA + + GT Y+APEV
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 444 PEF------DVYSFGMVALEVACGRRSKGLFEE 470
F D+++FG+V EVA S G+ E+
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC +L+H N+V+L E LV++ + G L + + + F
Sbjct: 51 KLERE--ARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 106
Query: 374 RYKILTGLASALLYLHEECDKPIVHHS-------------EYNARLGDLGLARLIQNDAC 420
+ + ++ Y H IVH + +L D GLA + ND+
Sbjct: 107 ASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-NDSE 162
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV + D+++ G++
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 196
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMA 356
K L+ H KE L+ +E+ + L +H+N+V L G C +L++ EY
Sbjct: 82 KMLKSTAHADEKEALM--------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 357 NGSLDLFIGKG--FLDWKTRYKILTGLASALLYLHEE----------CDKPIVHH----- 399
G L F+ + L+ + I AS LH K +H
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 400 -----SEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFG 452
+ + A++GD GLAR I ND+ + A P ++APE F T + DV+S+G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 453 MVALEV 458
++ E+
Sbjct: 254 ILLWEI 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G + + K D +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXL 171
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 43/199 (21%)
Query: 315 KGEREYL--AEICTIGRLRHKNLVQLRG--------WCHEREHLLLVYEYMANGSLDLFI 364
+ ER + AEI LRH+N++ W L LV +Y +GSL ++
Sbjct: 40 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ----LWLVSDYHEHGSLFDYL 95
Query: 365 GKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDL 409
+ + + K+ AS L +LH E KP + H + ++ + DL
Sbjct: 96 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 155
Query: 410 GLARLIQNDACVTTM------MAGTPGYLAPEV---SFSGKATPEF---DVYSFGMVALE 457
GLA +++D+ T+ GT Y+APEV S + K F D+Y+ G+V E
Sbjct: 156 GLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 213
Query: 458 VACGRRSKGLFEENSLVDY 476
+A G+ E+ L Y
Sbjct: 214 IARRCSIGGIHEDYQLPYY 232
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 43/199 (21%)
Query: 315 KGEREYL--AEICTIGRLRHKNLVQLRG--------WCHEREHLLLVYEYMANGSLDLFI 364
+ ER + AEI LRH+N++ W L LV +Y +GSL ++
Sbjct: 43 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ----LWLVSDYHEHGSLFDYL 98
Query: 365 GKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEYNAR-----------LGDL 409
+ + + K+ AS L +LH E KP + H + ++ + DL
Sbjct: 99 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 158
Query: 410 GLARLIQNDACVTTM------MAGTPGYLAPEV---SFSGKATPEF---DVYSFGMVALE 457
GLA +++D+ T+ GT Y+APEV S + K F D+Y+ G+V E
Sbjct: 159 GLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 216
Query: 458 VACGRRSKGLFEENSLVDY 476
+A G+ E+ L Y
Sbjct: 217 IARRCSIGGIHEDYQLPYY 235
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC + L+H N+V+L E LV++ + G L + + + +
Sbjct: 49 KLERE--ARICRL--LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 104
Query: 374 RYKILTGLASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDAC 420
+ + A+L+ H+ +VH +L D GLA +Q D
Sbjct: 105 ASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ 161
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV D+++ G++
Sbjct: 162 AWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVI 195
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGS-LDLF---IGKG-----FL 369
E L EI + + H N+V ++ L LV + ++ GS LD+ + KG L
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Query: 370 DWKTRYKILTGLASALLYLHEECD-------KPIVHHSEYNARLGDLGLARLIQNDACVT 422
D T IL + L YLH+ I+ + + ++ D G++ + +T
Sbjct: 114 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
Query: 423 -----TMMAGTPGYLAPEVSFSGKATP-EFDVYSFGMVALEVACG 461
GTP ++APEV + + D++SFG+ A+E+A G
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Conm) In Complex With Man1-2man-Ome
Length = 237
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 28 TFNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP 86
+FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 129 SFNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPQGSSVGRALFYAPVHIWE 183
Query: 87 -----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K D+ DG+AF ++ + P G LG+
Sbjct: 184 SSAVVASFDATFTFLI-KSSDSH-PADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKS-------------LNSTGIDLKS- 189
+AVELDTY N + P HIG+D S+ + AK NS G L +
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 117 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 224
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of
Concanavalin A, Iv.Atomic Coordinates,Hydrogen
Bonding,And Quaternary Structure
Length = 237
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPEGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
+ F TF I K PD + DG+AF ++ + P G LG+
Sbjct: 185 SATVSAFEATFAFLI-KSPD-SHPADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK----------------SLN---STG 184
+AVELDTY N + P HIG+D S+ + AK S++ S
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQDGKVGTAHIIYNSVDKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + +V D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYK 376
+ ++ E+ + R+ H N+V+L G C + LV EY GSL ++ G L + T
Sbjct: 47 KAFIVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH 104
Query: 377 ILTGL---ASALLYLHEECDKPIVHHSEYNA-----------RLGDLGLARLIQNDACVT 422
++ + + YLH K ++H ++ D G A IQ
Sbjct: 105 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---M 161
Query: 423 TMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
T G+ ++APEV + + DV+S+G++ EV R+
Sbjct: 162 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin
pdb|1H9W|B Chain B, Native Dioclea Guianensis Seed Lectin
Length = 237
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +FN F N DLI G T +G L LT + S+ P + VGR LF+ PV
Sbjct: 125 SLHFSFNQF----SQNPKDLILQGDATTDSDGNLELT-KVSSSGDPQGSSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDR-DPADGITFFIANTDTSIPSGSGGRLLGLF 233
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELD+Y N + P HIG+D S+ + A+ S NS L +
Sbjct: 5 VAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT------- 373
+ EI + L+H+N+V+L H L LV+E+M N DL K ++D +T
Sbjct: 51 IREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN---DL---KKYMDSRTVGNTPRG 104
Query: 374 ---------RYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDAC 420
++++L GLA LH + KP ++ + +LGD GLAR
Sbjct: 105 LELNLVKYFQWQLLQGLAFCHENKILHRDL-KPQNLLINKRGQLKLGDFGLARAFGIPVN 163
Query: 421 VTTMMAGTPGYLAPEVSFSGKA-TPEFDVYSFGMVALEVACGR 462
+ T Y AP+V + + D++S G + E+ G+
Sbjct: 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 114 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 167
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 221
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|1CN1|B Chain B, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|3CNA|A Chain A, Structure Of Concanavalin A At 2.4 Angstroms Resolution
Length = 237
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWPA 87
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W +
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPEGSSVGRALFYAPVHIWES 184
Query: 88 -----MFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
F TF I K PD + DG+AF ++ + P G LG+
Sbjct: 185 SAATVSFEATFAFLI-KSPD-SHPADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK----------------SLN---STG 184
+AVELDTY N + P HIG+D S+ + AK S++ S
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQDGKVGTAHIIYNSVDKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + +V D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 376 KILTGLASALLYLHEECDKPIVHH--SEYNARLGDLGLARL------IQNDACVTTMMAG 427
+T LA+AL Y H K ++H N LG G ++ + + + G
Sbjct: 138 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG 194
Query: 428 TPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
T YL PE+ + D++S G++ E G K FE N+
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 236
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT------- 373
+ EI + L H N+V+L H L LV+E++ S+DL K F+D
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDL---KKFMDASALTGIPLP 106
Query: 374 -----RYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTM 424
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDL-KPENLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 425 MAGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT------- 373
+ EI + L H N+V+L H L LV+E++ S+DL K F+D
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDL---KDFMDASALTGIPLP 106
Query: 374 -----RYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTM 424
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 425 MAGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 220
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CWM|D Chain D, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CY6|A Chain A, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CY6|D Chain D, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CYF|A Chain A, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2CYF|C Chain C, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2P37|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P34|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|3SNM|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds Complexed With Indole-3-Acetic Acid
pdb|4I30|A Chain A, Crystal Structure Of Canavalia Maritima Seeds Lectin
(Conm) Co- Crystalized With Gamma-Aminobutyric Acid
(Gaba) And Soaked With Adenine
Length = 237
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 29 FNNFNPDSCNNGNDLICMGSVTAG-NGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
FN F+ D DLI G T G +G L LT S P + VGR LF+ PV W
Sbjct: 130 FNQFSKDQ----KDLILQGDATTGTDGNLELT-RVSSNGSPQGSSVGRALFYAPVHIWES 184
Query: 87 ----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K D+ DG+AF ++ + P G LG+
Sbjct: 185 SAVVASFDATFTFLI-KSSDSH-PADGIAFFISNIDSSIPSGSTGRLLGLF 233
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAKS-------------LNSTGIDLKS- 189
+AVELDTY N + P HIG+D S+ + AK NS G L +
Sbjct: 5 VAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVGKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 114 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXL 168
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT------- 373
+ EI + L H N+V+L H L LV+E++ S+DL K F+D
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDL---KDFMDASALTGIPLP 105
Query: 374 -----RYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTM 424
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 425 MAGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 219
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYK 376
+ ++ E+ + R+ H N+V+L G C + LV EY GSL ++ G L + T
Sbjct: 46 KAFIVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH 103
Query: 377 ILTGL---ASALLYLHEECDKPIVHHSEYNA-----------RLGDLGLARLIQNDACVT 422
++ + + YLH K ++H ++ D G A IQ
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---M 160
Query: 423 TMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
T G+ ++APEV + + DV+S+G++ EV R+
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKT------- 373
+ EI + L H N+V+L H L LV+E++ S+DL K F+D
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDL---KKFMDASALTGIPLP 104
Query: 374 -----RYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTM 424
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDL-KPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 425 MAGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 218
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 323 EICTIGRLRHKNLVQL-----RGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
EI + ++H+NL+Q RG E E L L+ + GSL ++ + W +
Sbjct: 59 EIFSTPGMKHENLLQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYLKGNIITWNELCHV 117
Query: 378 LTGLASALLYLHE-------ECDKPIVHHSEYNAR-----------LGDLGLARLIQ--N 417
++ L YLHE E KP + H ++ ++ L D GLA +
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
Query: 418 DACVTTMMAGTPGYLAPEV-----SFSGKATPEFDVYSFGMVALEV 458
T GT Y+APEV +F A D+Y+ G+V E+
Sbjct: 178 PPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|B Chain B, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|C Chain C, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|D Chain D, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|3AX4|A Chain A, Three-Dimensional Structure Of Lectin From Dioclea
Violacea And Comparative Vasorelaxant Effects With
Dioclea Rostrata
Length = 237
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMG-SVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F+ F N DLI G + T +G L LT + S+ P N VGR LF+ PV
Sbjct: 125 SLHFSFHKF----SQNPKDLILQGDAFTDSDGNLELT-KVSSSGDPQGNSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDRE-PADGITFFIANTDTSIPSGSGGRLLGLF 233
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P+ HIG+D S+ + A+ S NS
Sbjct: 5 VAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTVHISYNSVAKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 117 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 224
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAAL 169
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMG-SVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F+ F N DLI G + T +G L LT + S+ P N VGR LF+ PV
Sbjct: 127 SLHFSFHKF----SQNPKDLILQGDAFTDSDGNLQLT-KVSSSGDPQGNSVGRALFYAPV 181
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 182 HIWEKSAVVASFDATFTFLI-KSPDRE-PADGITFFIANTDTSIPSGSGGRLLGLF 235
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P+ HIG+D S+ + A+ S NS
Sbjct: 7 VAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTVHISYNSVAKRLSAV 66
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 67 VSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 15/182 (8%)
Query: 296 SYKQLQKATHNFS------KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLL 349
SY + KA H + K+ + +E + EI + + ++V+ G + L
Sbjct: 41 SYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100
Query: 350 LVYEYMANGSLD--LFIGKGFLDWKTRYKILTGLASALLYLH-------EECDKPIVHHS 400
+V EY GS+ + + L IL L YLH + I+ ++
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT 160
Query: 401 EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
E +A+L D G+A + + + GTP ++APEV D++S G+ A+E+A
Sbjct: 161 EGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE 220
Query: 461 GR 462
G+
Sbjct: 221 GK 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 109 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTL 167
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 109 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 111 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 164
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 109 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 216
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAAL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 287 SAANVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE 346
S ++ L++ K L+KAT ++ + K ER+ L E+ H +V+L
Sbjct: 47 SGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEV------NHPFIVKLHYAFQTEG 99
Query: 347 HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI-LTGLASALLYLHE-----ECDKP--IVH 398
L L+ +++ G L + K + + K L LA AL +LH KP I+
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
E + +L D GL++ + GT Y+APEV T D +SFG++ E+
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
Query: 459 ACG 461
G
Sbjct: 220 LTG 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC + L+H N+V+L E H L+++ + G L + + + +
Sbjct: 56 KLERE--ARICRL--LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD 111
Query: 374 RYKILTGLASALLYLHEECDKPIVHHS-------------EYNARLGDLGLARLIQNDAC 420
+ + A+L+ H+ +VH + +L D GLA ++ +
Sbjct: 112 ASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV D+++ G++
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVI 202
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 293 ILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
+L + K L++A+ + ++ +RE AE+ T+ L+H+++V+ G C E LL+V+
Sbjct: 72 MLVAVKALKEASESARQDF-----QRE--AELLTM--LQHQHIVRFFGVCTEGRPLLMVF 122
Query: 353 EYMANGSLDLF----------------IGKGFLDWKTRYKILTGLASALLYL------HE 390
EYM +G L+ F + G L + + +A+ ++YL H
Sbjct: 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR 182
Query: 391 E-CDKPIVHHSEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFD 447
+ + + ++GD G++R + D P ++ PE K T E D
Sbjct: 183 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD 242
Query: 448 VYSFGMVALEV 458
V+SFG+V E+
Sbjct: 243 VWSFGVVLWEI 253
>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside
pdb|1DGL|B Chain B, Lectin From Dioclea Grandiflora Complexed To Trimannoside
Length = 237
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMG-SVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F+ F N DLI G + T +G L LT + S+ P N VGR LF+ PV
Sbjct: 125 SLHFSFHQF----SQNPKDLILQGDAFTDSDGNLELT-KVSSSGDPQGNSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDRE-PADGITFFIANTDTSIPSGSGGRLLGLF 233
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVEL++Y N + P+ HIG+D S+ + A+ S NS
Sbjct: 5 VAVELNSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTVHISYNSVAKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXL 166
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGF-LDWKTRY 375
E + EI L H N+++L + ++R + L+ EY G L + K D +
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA 126
Query: 376 KILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMM 425
I+ LA AL+Y H K ++H + ++ D G + + + M
Sbjct: 127 TIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTM 181
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GT YL PE+ + D++ G++ E+ G
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC + L+H N+V+L E H L+++ + G L + + + +
Sbjct: 67 KLERE--ARICRL--LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD 122
Query: 374 RYKILTGLASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDAC 420
+ + A+L+ H+ +VH +L D GLA ++ +
Sbjct: 123 ASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV D+++ G++
Sbjct: 180 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVI 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLA-EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL ++E ++ EI L + ++V G+ + + + +V E SL
Sbjct: 77 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR 136
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY + + YLH + ++H + + + ++GD GLA I
Sbjct: 137 KAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E D++S G + + G+
Sbjct: 193 EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXL 169
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
GT YL PE+ + D++S G++ E G+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLA-EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL ++E ++ EI L + ++V G+ + + + +V E SL
Sbjct: 77 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR 136
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY + + YLH + ++H + + + ++GD GLA I
Sbjct: 137 KAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E D++S G + + G+
Sbjct: 193 EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMA 356
K L+ H KE L+ +E+ + L +H+N+V L G C +L++ EY
Sbjct: 82 KMLKSTAHADEKEALM--------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 357 NGSLDLFIGKGF-----------LDWKTRYKILTGLASALLYLHEE-------CDKPIVH 398
G L F+ + L+ + + +A + +L + + ++
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193
Query: 399 HSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
+ + A++GD GLAR I ND+ + A P ++APE F T + DV+S+G++
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 457 EV 458
E+
Sbjct: 254 EI 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 293 ILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
+L + K L++A+ + ++ +RE AE+ T+ L+H+++V+ G C E LL+V+
Sbjct: 49 MLVAVKALKEASESARQDF-----QRE--AELLTM--LQHQHIVRFFGVCTEGRPLLMVF 99
Query: 353 EYMANGSLDLF----------------IGKGFLDWKTRYKILTGLASALLYL------HE 390
EYM +G L+ F + G L + + +A+ ++YL H
Sbjct: 100 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR 159
Query: 391 E-CDKPIVHHSEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFD 447
+ + + ++GD G++R + D P ++ PE K T E D
Sbjct: 160 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD 219
Query: 448 VYSFGMVALEV 458
V+SFG+V E+
Sbjct: 220 VWSFGVVLWEI 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMA 356
K L+ H KE L+ +E+ + L +H+N+V L G C +L++ EY
Sbjct: 74 KMLKSTAHADEKEALM--------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 357 NGSLDLFIGKGF-----------LDWKTRYKILTGLASALLYLHEE-------CDKPIVH 398
G L F+ + L+ + + +A + +L + + ++
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185
Query: 399 HSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
+ + A++GD GLAR I ND+ + A P ++APE F T + DV+S+G++
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 457 EV 458
E+
Sbjct: 246 EI 247
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 293 ILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
+L + K L++A+ + ++ +RE AE+ T+ L+H+++V+ G C E LL+V+
Sbjct: 43 MLVAVKALKEASESARQDF-----QRE--AELLTM--LQHQHIVRFFGVCTEGRPLLMVF 93
Query: 353 EYMANGSLDLF----------------IGKGFLDWKTRYKILTGLASALLYL------HE 390
EYM +G L+ F + G L + + +A+ ++YL H
Sbjct: 94 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR 153
Query: 391 E-CDKPIVHHSEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFD 447
+ + + ++GD G++R + D P ++ PE K T E D
Sbjct: 154 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD 213
Query: 448 VYSFGMVALEV 458
V+SFG+V E+
Sbjct: 214 VWSFGVVLWEI 224
>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin
pdb|3RS6|A Chain A, Crystal Structure Dioclea Virgata Lectin In Complexed With
X-Mannose
Length = 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +FN F N DLI G T +G L LT S P + VGR LF+ PV
Sbjct: 125 SLHFSFNQF----SQNPKDLILQGDATTDSDGNLQLT-RVSSDGSPQGSSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDR-DPADGITFFIANTDTSIPSGSGGRLLGLF 233
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELD+Y N + P HIG+D S+ + A+ S NS L +
Sbjct: 5 VAVELDSYPNTDIGDPSYPHIGIDIKSVRSKSTARWNMQTGKVGTAHISYNSVAKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With
Methyl-Alpha-D- Mannose
Length = 236
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSV-TAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ TFN F + DLI G T +G L LT S P + VGR L++ PV
Sbjct: 125 SLHFTFNQF----SQSPKDLILQGDASTDSDGNLQLTR--VSNGSPQSDSVGRALYYAPV 178
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+AF +A + P G LG+
Sbjct: 179 HIWDKSAVVASFDATFTFLI-KSPDRE-IADGIAFFIANTDSSIPHGSGGRLLGLF 232
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELDTY N + P HIG++ S+ + + S NS L +
Sbjct: 5 VAVELDTYPNTDIGDPSYQHIGINIKSIRSKATTRWDVQNGKVGTAHISYNSVAKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
G + TV D D +P V VG +ASTGL +E++ +L F S
Sbjct: 65 VSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILT 379
+ EI + +LRH+NLV L C +++ LV+E++ + L DL + LD++ K L
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 380 GLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ + + + H I+H +L D G AR + V T
Sbjct: 132 QIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 430 GYLAPEVSFS----GKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSL 480
Y APE+ GKA DV++ G + E+ G + LF +S +D ++ +
Sbjct: 189 WYRAPELLVGDVKYGKAV---DVWAIGCLVTEMFMG---EPLFPGDSDIDQLYHI 237
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 287 SAANVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE 346
S ++ L++ K L+KAT ++ + K ER+ L E+ H +V+L
Sbjct: 48 SGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEV------NHPFIVKLHYAFQTEG 100
Query: 347 HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI-LTGLASALLYLHE-----ECDKP--IVH 398
L L+ +++ G L + K + + K L LA AL +LH KP I+
Sbjct: 101 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 160
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
E + +L D GL++ + GT Y+APEV T D +SFG++ E+
Sbjct: 161 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 220
Query: 459 ACG 461
G
Sbjct: 221 LTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 287 SAANVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE 346
S ++ L++ K L+KAT ++ + K ER+ L E+ H +V+L
Sbjct: 47 SGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEV------NHPFIVKLHYAFQTEG 99
Query: 347 HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI-LTGLASALLYLHE-----ECDKP--IVH 398
L L+ +++ G L + K + + K L LA AL +LH KP I+
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 399 HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
E + +L D GL++ + GT Y+APEV T D +SFG++ E+
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
Query: 459 ACG 461
G
Sbjct: 220 LTG 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N R+ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 15/172 (8%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGF------LDWKTR 374
+ EI + L H N+V+L H L LV+E++ D L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL 109
Query: 375 YKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG 430
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 110 FQLLQGLAFCHSHRVLHRDL-KPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 431 YLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDL 169
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENS 472
GT YL PE+ + D++S G++ E G K FE N+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---KPPFEANT 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GL+ + LH + KP ++ ++E +L D GLAR T
Sbjct: 110 -----FQLLQGLSFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL 108
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR T
Sbjct: 109 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 317 EREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRY 375
E + E+ LRH N+++L G+ H+ + L+ EY G++ + K D +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 376 KILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMM 425
+T LA+AL Y H K ++H S ++ D G + + + +
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTL 170
Query: 426 AGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GT YL PE+ + D++S G++ E G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The
Seeds Of Dioclea Wilsonii Standl
Length = 237
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMG-SVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F+ F N DLI G + T +G L LT S P N VGR LF+ PV
Sbjct: 125 SLHFSFHKF----SQNPKDLILQGDAFTDSDGNLELTKVSNSG-DPQGNSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDRE-PADGITFFIANTDTSIPSGSGGRLLGLF 233
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P+ HIG+D S+ + A+ S NS
Sbjct: 5 VAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTVHISYNSVAKRLSAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLA-EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL ++E ++ EI L + ++V G+ + + + +V E SL
Sbjct: 77 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR 136
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY + + YLH + ++H + + + ++GD GLA I
Sbjct: 137 KAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E D++S G + + G+
Sbjct: 193 EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMA 356
K L+ H KE L+ +E+ + L +H+N+V L G C +L++ EY
Sbjct: 82 KMLKSTAHADEKEALM--------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 357 NGSLDLFIGKG--FLDWKTRYKILTGLASALLYLHEE----------CDKPIVHH----- 399
G L F+ + L+ + I S LH K +H
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 400 -----SEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFG 452
+ + A++GD GLAR I ND+ + A P ++APE F T + DV+S+G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 453 MVALEV 458
++ E+
Sbjct: 254 ILLWEI 259
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 61/236 (25%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRY 375
+E+ E+ + L H N+V+L G H +V E++ G L L + W +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 376 KILTGLASALLYLHEECDKPIVH---------------HSEYNARLGDLGLARLIQNDAC 420
+++ +A + Y+ + + PIVH ++ A++ D GL+ Q
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVH 181
Query: 421 VTTMMAGTPGYLAPEV------SFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV 474
+ + G ++APE S++ KA D YSF M+ + G +G F+E S
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKA----DTYSFAMILYTILTG---EGPFDEYS-- 232
Query: 475 DYVWSLYGKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQI 530
YGK + + EE ++ T+ DC P++R V+++
Sbjct: 233 ------YGKIKFINMI--------REEGLRPTIP-------EDC--PPRLRNVIEL 265
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR---Y 375
+ EI + L H N+V L H L LV+E+M + G D + + Y
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 376 KILTGLASALLY--LHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
++L G+A + LH + KP ++ +S+ +L D GLAR T T Y
Sbjct: 127 QLLRGVAHCHQHRILHRDL-KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 432 LAPEVSF-SGKATPEFDVYSFGMVALEVACGR 462
AP+V S K + D++S G + E+ G+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 25/149 (16%)
Query: 347 HLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEEC----DKPIVHHSEY 402
L L+ Y +GSL F+ + L+ ++ A L +LH E KP + H ++
Sbjct: 80 QLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDF 139
Query: 403 NAR-----------LGDLGLARLIQNDACVTTM----MAGTPGYLAPEVSFSGKATPEF- 446
+R + DLGLA + + + GT Y+APEV T F
Sbjct: 140 KSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFE 199
Query: 447 -----DVYSFGMVALEVACGRRSKGLFEE 470
D+++FG+V E+A G+ E+
Sbjct: 200 SYKWTDIWAFGLVLWEIARRTIVNGIVED 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF-----------------IGKGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L + + + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--GKGFLDWKTR---Y 375
+ EI + L H N+V L H L LV+E+M + G D + + Y
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 376 KILTGLASALLY--LHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGY 431
++L G+A + LH + KP ++ +S+ +L D GLAR T T Y
Sbjct: 127 QLLRGVAHCHQHRILHRDL-KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 432 LAPEVSF-SGKATPEFDVYSFGMVALEVACGR 462
AP+V S K + D++S G + E+ G+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 309 KENLLGKGEREYLA-EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-- 365
K LL ++E ++ EI L + ++V G+ + + + +V E SL
Sbjct: 61 KSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR 120
Query: 366 KGFLDWKTRYKILTGLASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI 415
K + + RY + + YLH + ++H + + + ++GD GLA I
Sbjct: 121 KAVTEPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
Query: 416 QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
+ D + GTP Y+APEV + E D++S G + + G+
Sbjct: 177 EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 297 YKQLQKATHNFSKENLLG-KGERE---YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
YK K T + ++ K E E Y+ EI + H N+V+L + +L ++
Sbjct: 54 YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 113
Query: 353 EYMANGSLD---LFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS--------- 400
E+ A G++D L + + + + + + AL YLH D I+H
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLH---DNKIIHRDLKAGNILFT 169
Query: 401 -EYNARLGDLGLA----RLIQNDACVTTMMAGTPGYLAPEVSF--SGKATP---EFDVYS 450
+ + +L D G++ R IQ GTP ++APEV + K P + DV+S
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQR----RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 451 FGMVALEVA 459
G+ +E+A
Sbjct: 226 LGITLIEMA 234
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Query: 303 ATHNFSKENLLGKGE-REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLD 361
A +K+ + + E R E+ + L H LV L + E + +V + + G L
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR 103
Query: 362 LFIGKGF-LDWKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLG 410
+ + +T + L AL YL ++ I+H + + D
Sbjct: 104 YHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFN 160
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGKA---TPEFDVYSFGMVALEVACGRR 463
+A ++ + +TTM AGT Y+APE+ S K + D +S G+ A E+ GRR
Sbjct: 161 IAAMLPRETQITTM-AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL---- 378
EI L+HKN+VQ G E + + E + GSL + + K + +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 379 TGLASALLYLHEECDKPIVHH---------SEYNA--RLGDLGLARLIQNDACVTTMMAG 427
+ L YLH D IVH + Y+ ++ D G ++ + T G
Sbjct: 129 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 185
Query: 428 TPGYLAPEV-----SFSGKATPEFDVYSFGMVALEVACGR 462
T Y+APE+ GKA D++S G +E+A G+
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAA---DIWSLGCTIIEMATGK 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 113 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 220
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 112 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 219
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 297 YKQLQKATHNFSKENLLG-KGERE---YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
YK K T + ++ K E E Y+ EI + H N+V+L + +L ++
Sbjct: 54 YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 113
Query: 353 EYMANGSLD---LFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS--------- 400
E+ A G++D L + + + + + + AL YLH D I+H
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLH---DNKIIHRDLKAGNILFT 169
Query: 401 -EYNARLGDLGLA----RLIQNDACVTTMMAGTPGYLAPEVSF--SGKATP---EFDVYS 450
+ + +L D G++ R IQ GTP ++APEV + K P + DV+S
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQR----RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 451 FGMVALEVA 459
G+ +E+A
Sbjct: 226 LGITLIEMA 234
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 112 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 219
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 112 -----FQLLQGLAFCHSHRVLHRDL-KPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 297 YKQLQKATHNFSKENLLG-KGERE---YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
YK K T + ++ K E E Y+ EI + H N+V+L + +L ++
Sbjct: 54 YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 113
Query: 353 EYMANGSLD---LFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS--------- 400
E+ A G++D L + + + + + + AL YLH D I+H
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLH---DNKIIHRDLKAGNILFT 169
Query: 401 -EYNARLGDLGLA----RLIQNDACVTTMMAGTPGYLAPEVSF--SGKATP---EFDVYS 450
+ + +L D G++ R IQ GTP ++APEV + K P + DV+S
Sbjct: 170 LDGDIKLADFGVSAKNTRTIQR----RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 451 FGMVALEVA 459
G+ +E+A
Sbjct: 226 LGITLIEMA 234
>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin
Length = 237
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +FN F N DLI T +G L LT + S+ P + VGR LF+ PV
Sbjct: 125 SLHFSFNQF----SQNPKDLILQSDATTDSDGNLELT-KVSSSGDPQGSSVGRALFYAPV 179
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 180 HIWEKSAVVASFDATFTFLI-KSPDR-DPADGITFFIANTDTSIPSGSGGRLLGLF 233
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTGIDLKS- 189
+AVELD+Y N + P HIG+D S+ + A+ S NS L +
Sbjct: 5 VAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAV 64
Query: 190 -----GRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF-----------------IGKGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L + + + + +K
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 113 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 113 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 220
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 109 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 162
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 109 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 162
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKIL---- 378
EI L+HKN+VQ G E + + E + GSL + + K + +
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 379 TGLASALLYLHEECDKPIVHH---------SEYNA--RLGDLGLARLIQNDACVTTMMAG 427
+ L YLH D IVH + Y+ ++ D G ++ + T G
Sbjct: 115 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 171
Query: 428 TPGYLAPEV-----SFSGKATPEFDVYSFGMVALEVACGR 462
T Y+APE+ GKA D++S G +E+A G+
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAA---DIWSLGCTIIEMATGK 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 111 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 52/227 (22%)
Query: 293 ILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
IL + K L+ A+ N K+ RE AE+ T L+H+++V+ G C E + L++V+
Sbjct: 44 ILVAVKTLKDASDNARKDF-----HRE--AELLT--NLQHEHIVKFYGVCVEGDPLIMVF 94
Query: 353 EYMANGSLDLFI----------GKG----FLDWKTRYKILTGLASALLYLHEECDKPIVH 398
EYM +G L+ F+ +G L I +A+ ++YL + VH
Sbjct: 95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVH 151
Query: 399 H----------SEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEF 446
++GD G++R + D P ++ PE K T E
Sbjct: 152 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 211
Query: 447 DVYSFGMVALEV-ACGRRSKGLFEENSLVDYVWSLYGKNALLECVDK 492
DV+S G+V E+ G++ W N ++EC+ +
Sbjct: 212 DVWSLGVVLWEIFTYGKQP-------------WYQLSNNEVIECITQ 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 114 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 167
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGF-LDWK 372
K + E EI + +L H NL+QL + ++LV EY+ G L D I + + L
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187
Query: 373 TRYKILTGLASALLYLHE----ECD-KP----IVHHSEYNARLGDLGLARLIQNDACVTT 423
+ + + ++H+ D KP V+ ++ D GLAR + +
Sbjct: 188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GTP +LAPEV + D++S G++A + G
Sbjct: 248 NF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 111 -----FQLLQGLAFCHSHRVLHRDL-KPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 218
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 111 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 218
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 110 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L + + K I
Sbjct: 58 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 117 TARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV + P + DVY+FG+V E+ G+
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG--FLDWKTRYKILTGLASALLYLH 389
H ++++ G + + + ++ +Y+ G L + K F + ++ + AL YLH
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH 123
Query: 390 EECD-----KP--IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKA 442
+ KP I+ + ++ D G A+ + + VT + GTP Y+APEV +
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPEVVSTKPY 180
Query: 443 TPEFDVYSFGMVALEVACG 461
D +SFG++ E+ G
Sbjct: 181 NKSIDWWSFGILIYEMLAG 199
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G + + +K
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKT 373
K ERE A IC + L+H N+V+L E LV++ + G L + + + +
Sbjct: 76 KLERE--ARICRL--LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 131
Query: 374 RYKILTGLASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDAC 420
+ + ++ ++H+ IVH +L D GLA +Q +
Sbjct: 132 ASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ 188
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV D+++ G++
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVI 222
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
pdb|1IOA|B Chain B, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
Length = 240
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 29 FNNFNPDSCNNGNDLICMGSVT-AGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP- 86
F NF+ D + LI G+ T + G L LT + LP ++ +GR + P+
Sbjct: 8 FPNFHTD-----DKLILQGNATISSKGQLQLTGVGSNELPR-VDSLGRAFYSDPIQIKDS 61
Query: 87 ---AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIMDKSTQDGVVR 143
A F T FT I + + + S G+AF + N PP +LGI + + + R
Sbjct: 62 NNVASFNTNFTFII-RAKNQSISAYGLAFALVPVNSPPQKKQ--EFLGIFNTNNPEPNAR 118
Query: 144 QLAVELDTYMNEYMIPDGNHI--------------GVDTTSMATPVAAKS-----LNSTG 184
+AV +T+ N D N I G T T ++ + L+ T
Sbjct: 119 TVAVVFNTFKNRIDF-DKNFIKPYVNENCDFHKYNGEKTDVQITYDSSNNDLRVFLHFTV 177
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVSFPIEFDEK 241
+K + TV ++ K V V VGF+ ++GL +++ + D + SF +F K
Sbjct: 178 SQVKCSVSATVHLE----KEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSSKFRNK 230
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L + + K I
Sbjct: 70 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLA--RLIQNDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 129 TARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV + P + DVY+FG+V E+ G+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM-----------ANGSLDLFIGKGFL 369
+ EI + L H N+V+L H L LV+E++ A + L + K +L
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL 112
Query: 370 DWKTRYKILTGLA--SALLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMM 425
+++L GLA + LH + KP ++ ++E +L D GLAR
Sbjct: 113 -----FQLLQGLAFCHSHRVLHRDL-KPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 426 AGTPGYLAPEVSFSGK-ATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
T Y APE+ K + D++S G + E+ R LF +S +D ++ ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQLFRIF 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 345 REHLLLVYEYMANGSLDLFIG---KGFLDWKTRY--KILTGL----ASALLYLHEECDKP 395
+E+L V EY+ G L I K L T Y +I+ GL + ++Y + D
Sbjct: 90 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN- 148
Query: 396 IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
I+ + + ++ D G+ + T GTP Y+APE+ K D +SFG++
Sbjct: 149 ILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 208
Query: 456 LEVACGR 462
E+ G+
Sbjct: 209 YEMLIGQ 215
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYK 376
++L E + + H N+V+L G C +++ + +V E + G F+ L KT +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ 217
Query: 377 ILTGLASALLYLHEECDKPIVHH---------SEYNA-RLGDLGLARLIQNDACVTT--M 424
++ A+ + YL +C +H +E N ++ D G++R + + +
Sbjct: 218 MVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 425 MAGTPGYLAPEVSFSGKATPEFDVYSFGMVALE 457
+ APE G+ + E DV+SFG++ E
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 297 YKQLQKATHNFSKENLLG-KGERE---YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVY 352
YK K T + ++ K E E Y+ EI + H N+V+L + +L ++
Sbjct: 27 YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 86
Query: 353 EYMANGSLD---LFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS--------- 400
E+ A G++D L + + + + + + AL YLH D I+H
Sbjct: 87 EFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLH---DNKIIHRDLKAGNILFT 142
Query: 401 -EYNARLGDLGL-ARLIQNDACVTTMMAGTPGYLAPEVSF--SGKATP---EFDVYSFGM 453
+ + +L D G+ A+ + GTP ++APEV + K P + DV+S G+
Sbjct: 143 LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 202
Query: 454 VALEVA 459
+E+A
Sbjct: 203 TLIEMA 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF----- 363
KEN R+ L+E + ++ H ++++L G C + LLL+ EY GSL F
Sbjct: 62 KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 364 -IGKGFLDWKTR-----------------------YKILTG---LASALLYLHEECDKPI 396
+G G+L ++I G LA L + + I
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181
Query: 397 VHHSEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMV 454
+ ++ D GL+R + + D+ V P ++A E F T + DV+SFG++
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 455 ALEVA 459
E+
Sbjct: 242 LWEIV 246
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF----- 363
KEN R+ L+E + ++ H ++++L G C + LLL+ EY GSL F
Sbjct: 62 KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 364 -IGKGFLDWKTR-----------------------YKILTG---LASALLYLHEECDKPI 396
+G G+L ++I G LA L + + I
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNI 181
Query: 397 VHHSEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMV 454
+ ++ D GL+R + + D+ V P ++A E F T + DV+SFG++
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 455 ALEVA 459
E+
Sbjct: 242 LWEIV 246
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG-FLDWKTRYKILT 379
L +C +G H N++ L G C R +L L EY +G+L F+ K L+ + I
Sbjct: 73 LEVLCKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 130
Query: 380 GLASAL---LYLHEECD----------KPIVHHS----------EYNARLGDLGLARLIQ 416
AS L LH D K +H + Y A++ D GL+R
Sbjct: 131 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--G 188
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA-------CGRRSKGLF 468
+ V M P ++A E T DV+S+G++ E+ CG L+
Sbjct: 189 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 248
Query: 469 EE 470
E+
Sbjct: 249 EK 250
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYK 376
++L E + + H N+V+L G C +++ + +V E + G F+ L KT +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ 217
Query: 377 ILTGLASALLYLHEECDKPIVHH---------SEYNA-RLGDLGLARLIQNDACVTT--M 424
++ A+ + YL +C +H +E N ++ D G++R + + +
Sbjct: 218 MVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 425 MAGTPGYLAPEVSFSGKATPEFDVYSFGMVALE 457
+ APE G+ + E DV+SFG++ E
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 310 ENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGF 368
+N LG EI + LRH+++ QL + +V EY G L D I +
Sbjct: 45 KNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR 104
Query: 369 LDWKTRYKILTGLASALLYLHEECD-----KP--IVHHSEYNARLGDLGL-ARLIQNDAC 420
L + + + SA+ Y+H + KP ++ + +L D GL A+ N
Sbjct: 105 LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164
Query: 421 VTTMMAGTPGYLAPEVSFSGKAT--PEFDVYSFGMVALEVACG 461
G+ Y APE+ GK+ E DV+S G++ + CG
Sbjct: 165 HLQTCCGSLAYAAPEL-IQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 78/214 (36%), Gaps = 54/214 (25%)
Query: 289 ANVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHL 348
A P L Y+ KE + ++ E + + N+V+L G C + +
Sbjct: 66 ARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125
Query: 349 LLVYEYMANGSLDLFIGK---------GFLDWKTRYK----------------ILTGLAS 383
L++EYMA G L+ F+ D TR + I +A+
Sbjct: 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAA 185
Query: 384 ALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ---------NDACVTTM 424
+ YL E + VH ++ D GL+R I NDA
Sbjct: 186 GMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR- 241
Query: 425 MAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
++ PE F + T E DV+++G+V E+
Sbjct: 242 ------WMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 345 REHLLLVYEYMANGSLDLFIG---KGFLDWKTRY--KILTGL----ASALLYLHEECDKP 395
+E+L V EY+ G L I K L T Y +I+ GL + ++Y + D
Sbjct: 91 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN- 149
Query: 396 IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
I+ + + ++ D G+ + T GTP Y+APE+ K D +SFG++
Sbjct: 150 ILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 209
Query: 456 LEVACGR 462
E+ G+
Sbjct: 210 YEMLIGQ 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 309 KENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF----- 363
KEN R+ L+E + ++ H ++++L G C + LLL+ EY GSL F
Sbjct: 62 KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 364 -IGKGFLDWKTR-----------------------YKILTG---LASALLYLHEECDKPI 396
+G G+L ++I G LA L + + I
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181
Query: 397 VHHSEYNARLGDLGLAR-LIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMV 454
+ ++ D GL+R + + D+ V P ++A E F T + DV+SFG++
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 455 ALEVA 459
E+
Sbjct: 242 LWEIV 246
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 36/182 (19%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG-FLDWKTRYKILT 379
L +C +G H N++ L G C R +L L EY +G+L F+ K L+ + I
Sbjct: 66 LEVLCKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 123
Query: 380 GLASAL---LYLHEECD----------KPIVHH----------SEYNARLGDLGLARLIQ 416
AS L LH D K +H Y A++ D GL+R
Sbjct: 124 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--G 181
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA-------CGRRSKGLF 468
+ V M P ++A E T DV+S+G++ E+ CG L+
Sbjct: 182 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 241
Query: 469 EE 470
E+
Sbjct: 242 EK 243
>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|C Chain C, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|E Chain E, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|G Chain G, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
Length = 237
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P HIG+D S+ + A+ S NS
Sbjct: 5 VAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLTAV 64
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 65 VSYSGSSSTTVSYDVDLTNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 28 TFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVLAWP 86
+FN F N DLI G T +G L LT + S+ P + VGR LF+ PV W
Sbjct: 129 SFNQF----TQNPKDLILQGDATTDSDGNLELT-KVSSSGSPQGSSVGRALFYAPVHIWE 183
Query: 87 -----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
A F TFT I K PD+ DG+ F +A + P G LG+
Sbjct: 184 SSAVVASFDATFTFLI-KSPDSE-PADGITFFIANTDTSIPSGSSGRLLGLF 233
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 61/236 (25%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRY 375
+E+ E+ + L H N+V+L G H +V E++ G L L + W +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 376 KILTGLASALLYLHEECDKPIVH---------------HSEYNARLGDLGLARLIQNDAC 420
+++ +A + Y+ + + PIVH ++ A++ D G + Q
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVH 181
Query: 421 VTTMMAGTPGYLAPEV------SFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV 474
+ + G ++APE S++ KA D YSF M+ + G +G F+E S
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKA----DTYSFAMILYTILTG---EGPFDEYS-- 232
Query: 475 DYVWSLYGKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQI 530
YGK + + EE ++ T+ DC P++R V+++
Sbjct: 233 ------YGKIKFINMI--------REEGLRPTIP-------EDC--PPRLRNVIEL 265
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 36/182 (19%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG-FLDWKTRYKILT 379
L +C +G H N++ L G C R +L L EY +G+L F+ K L+ + I
Sbjct: 76 LEVLCKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 133
Query: 380 GLASAL---LYLHEECD----------KPIVHH----------SEYNARLGDLGLARLIQ 416
AS L LH D K +H Y A++ D GL+R
Sbjct: 134 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--G 191
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVA-------CGRRSKGLF 468
+ V M P ++A E T DV+S+G++ E+ CG L+
Sbjct: 192 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 251
Query: 469 EE 470
E+
Sbjct: 252 EK 253
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMA 356
K L+ H KE L+ +E+ + L +H+N+V L G C +L++ EY
Sbjct: 82 KMLKSTAHADEKEALM--------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 357 NGSLDLFI-----------------------GKGFLDWKTRY-KILTGLASALLYLHEEC 392
G L F+ + L + ++ + + LAS +
Sbjct: 134 YGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVA 193
Query: 393 DKPIVHHSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYS 450
+ ++ + + A++GD GLAR I ND+ + A P ++APE F T + DV+S
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 253
Query: 451 FGMVALEV 458
+G++ E+
Sbjct: 254 YGILLWEI 261
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 120
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 121 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 61/236 (25%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRY 375
+E+ E+ + L H N+V+L G H +V E++ G L L + W +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 376 KILTGLASALLYLHEECDKPIVH---------------HSEYNARLGDLGLARLIQNDAC 420
+++ +A + Y+ + + PIVH ++ A++ D L+ Q
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVH 181
Query: 421 VTTMMAGTPGYLAPEV------SFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLV 474
+ + G ++APE S++ KA D YSF M+ + G +G F+E S
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKA----DTYSFAMILYTILTG---EGPFDEYS-- 232
Query: 475 DYVWSLYGKNALLECVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVVQI 530
YGK + + EE ++ T+ DC P++R V+++
Sbjct: 233 ------YGKIKFINMI--------REEGLRPTIP-------EDC--PPRLRNVIEL 265
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 121
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 122 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
N R+ DLGLA ++ T AGTPG++APE+ + D ++ G+ E+ R
Sbjct: 327 NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
Query: 463 ---RSKGLFEENS 472
R++G EN
Sbjct: 387 GPFRARGEKVENK 399
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
N R+ DLGLA ++ T AGTPG++APE+ + D ++ G+ E+ R
Sbjct: 327 NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
Query: 463 ---RSKGLFEENS 472
R++G EN
Sbjct: 387 GPFRARGEKVENK 399
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
N R+ DLGLA ++ T AGTPG++APE+ + D ++ G+ E+ R
Sbjct: 327 NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
Query: 463 ---RSKGLFEENS 472
R++G EN
Sbjct: 387 GPFRARGEKVENK 399
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A+ D+++ G + ++ G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N L + KQLQ + + +R++ EI + L +V+ RG + R
Sbjct: 34 NTGALVAVKQLQHSGPD---------QQRDFQREIQILKALHSDFIVKYRGVSYGPGRPE 84
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD-------------- 393
L LV EY+ +G L F+ R++ + LLY + C
Sbjct: 85 LRLVMEYLPSGCLRDFL--------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 136
Query: 394 ---KPIVHHSEYNARLGDLGLARLI--QNDACVTTMMAGTP-GYLAPEVSFSGKATPEFD 447
+ I+ SE + ++ D GLA+L+ D V +P + APE + + D
Sbjct: 137 LAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSD 196
Query: 448 VYSFGMVALEV 458
V+SFG+V E+
Sbjct: 197 VWSFGVVLYEL 207
>pdb|1QMO|A Chain A, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|B Chain B, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|C Chain C, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|D Chain D, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 113
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTAGNGYLSLTPEPYSTLPPPLNKVGRVLFHQPVL 83
S+ +F F+P N DLI G T+ N L +T + S P + GRVL+ P+
Sbjct: 3 SLSFSFTKFDP----NQEDLIFQGHATSTNNVLQVT-KLDSAGNPVSSSAGRVLYSAPLR 57
Query: 84 AWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLG 131
W F T IS P + DG+AF +A PP+ SY G
Sbjct: 58 LWEDSAVLTSFDTIINFEIST-PYTSRIADGLAFFIA------PPDSVISYHG 103
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 119
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 148
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 149 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
N R+ DLGLA ++ T AGTPG++APE+ + D ++ G+ E+ R
Sbjct: 327 NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
Query: 463 ---RSKGLFEENS 472
R++G EN
Sbjct: 387 GPFRARGEKVENK 399
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 118
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 119 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 39/191 (20%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N L + KQLQ + + +R++ EI + L +V+ RG + R+
Sbjct: 37 NTGALVAVKQLQHSGPD---------QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 87
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD-------------- 393
L LV EY+ +G L F+ R++ + LLY + C
Sbjct: 88 LRLVMEYLPSGCLRDFL--------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 139
Query: 394 ---KPIVHHSEYNARLGDLGLARLI--QNDACVTTMMAGTP-GYLAPEVSFSGKATPEFD 447
+ I+ SE + ++ D GLA+L+ D V +P + APE + + D
Sbjct: 140 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 199
Query: 448 VYSFGMVALEV 458
V+SFG+V E+
Sbjct: 200 VWSFGVVLYEL 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N L + KQLQ + + +R++ EI + L +V+ RG + R+
Sbjct: 38 NTGALVAVKQLQHSGPD---------QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 88
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD-------------- 393
L LV EY+ +G L F+ R++ + LLY + C
Sbjct: 89 LRLVMEYLPSGCLRDFL--------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 140
Query: 394 ---KPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPE 445
+ I+ SE + ++ D GLA+L+ D + PG + APE + +
Sbjct: 141 LAARNILVESEAHVKIADFGLAKLLPLDK--DYYVVREPGQSPIFWYAPESLSDNIFSRQ 198
Query: 446 FDVYSFGMVALEV 458
DV+SFG+V E+
Sbjct: 199 SDVWSFGVVLYEL 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 144
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 145 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
+Q Q K+ G E+ E RL+H N+V L G + + L +++ Y ++
Sbjct: 37 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 358 GSLDLFI-----------------GKGFLDWKTRYKILTGLASALLYL------HEE-CD 393
G L F+ K L+ ++ +A+ + YL H++
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 394 KPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP----GYLAPEVSFSGKATPEFDVY 449
+ ++ + + N ++ DLGL R + A + G ++APE GK + + D++
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVY--AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 214
Query: 450 SFGMVALEV 458
S+G+V EV
Sbjct: 215 SYGVVLWEV 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 125
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 126 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L + + K I
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLA--RLIQNDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 129 TARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV + P + DVY+FG+V E+ G+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
+Q Q K+ G E+ E RL+H N+V L G + + L +++ Y ++
Sbjct: 54 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 358 GSLDLFI-----------------GKGFLDWKTRYKILTGLASALLYL------HEE-CD 393
G L F+ K L+ ++ +A+ + YL H++
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 394 KPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP----GYLAPEVSFSGKATPEFDVY 449
+ ++ + + N ++ DLGL R + A + G ++APE GK + + D++
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVY--AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
Query: 450 SFGMVALEV 458
S+G+V EV
Sbjct: 232 SYGVVLWEV 240
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWK 372
K ERE A IC + L+H N+V+L E LV++ + G L D+ + + +
Sbjct: 49 KLERE--ARICRL--LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 104
Query: 373 TRYKILTGLASALLYLHEECDKPIVHHSEYN--------------ARLGDLGLARLIQND 418
+ I L S C + H + +L D GLA +Q D
Sbjct: 105 ASHCIQQILESV-----NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV D+++ G++
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVI 195
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 144
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 145 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 59 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 118 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 146
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 147 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 59 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 118 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 140
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 56 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 115 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 290 NVPILFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHE--REH 347
N L + KQLQ + + +R++ EI + L +V+ RG + R+
Sbjct: 50 NTGALVAVKQLQHSGPD---------QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100
Query: 348 LLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD-------------- 393
L LV EY+ +G L F+ R++ + LLY + C
Sbjct: 101 LRLVMEYLPSGCLRDFL--------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 152
Query: 394 ---KPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPG-----YLAPEVSFSGKATPE 445
+ I+ SE + ++ D GLA+L+ D + PG + APE + +
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDK--DYYVVREPGQSPIFWYAPESLSDNIFSRQ 210
Query: 446 FDVYSFGMVALEV 458
DV+SFG+V E+
Sbjct: 211 SDVWSFGVVLYEL 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 81 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 140 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 82 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 141 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 54 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 113 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTG-LASALLYLHE 390
H LV L L V EY+ G L + + + + + ++ AL YLHE
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 391 --------ECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKA 442
+ D ++ SE + +L D G+ + T+ GTP Y+APE+
Sbjct: 129 RGIIYRDLKLDN-VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 443 TPEFDVYSFGMVALEVACGR 462
D ++ G++ E+ GR
Sbjct: 188 GFSVDWWALGVLMFEMMAGR 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 22/150 (14%)
Query: 320 YLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---------GFLD 370
+LAE + L+H LV+L +E + ++ E+MA GSL F+ +D
Sbjct: 224 FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 371 WKTRYKILTGLASALLYLHEECDKP-IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ + Y+H + I+ + ++ D GLAR+ A P
Sbjct: 283 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFP 332
Query: 430 -GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ APE G T + DV+SFG++ +E+
Sbjct: 333 IKWTAPEAINFGSFTIKSDVWSFGILLMEI 362
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWK 372
K ERE A IC + L+H N+V+L E LV++ + G L D+ + + +
Sbjct: 49 KLERE--ARICRL--LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 104
Query: 373 TRYKILTGLASALLYLHEECDKPIVHHSEYN--------------ARLGDLGLARLIQND 418
+ I L S C + H + +L D GLA +Q D
Sbjct: 105 ASHCIQQILESV-----NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
AGTPGYL+PEV D+++ G++
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVI 195
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ Y + G+L ++ G + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTG-LASALLYLHE 390
H LV L L V EY+ G L + + + + + ++ AL YLHE
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 391 ECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSG 440
+ I++ SE + +L D G+ + T+ GTP Y+APE+
Sbjct: 172 ---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 441 KATPEFDVYSFGMVALEVACGR 462
D ++ G++ E+ GR
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGR 250
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 350 LVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH--------- 399
+V EY+ +L D+ +G + K +++ AL + H+ I+H
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 400 SEYNA-RLGDLGLARLIQ---NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
S NA ++ D G+AR I N T + GT YL+PE + DVYS G V
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 456 LEVACG 461
EV G
Sbjct: 210 YEVLTG 215
>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin
Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P HIG+D S+ + A+ S NS
Sbjct: 7 VAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAV 66
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 67 VSYSGTSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F+ F N DLI T +G L LT S P + VGR LF+ PV
Sbjct: 127 SLHFSFSQF----SQNPKDLILQSDATTDSDGNLQLT-RVSSDGSPQGSSVGRALFYAPV 181
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 182 HIWEKSAVVASFDATFTFLI-KSPDR-DPADGITFFIANTDTSIPSGSGGRLLGLF 235
>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin
S131h Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 145 LAVELDTYMN-EYMIPDGNHIGVDTTSMATPVAAK-------------SLNSTG------ 184
+AVELD+Y N + P HIG+D S+ + A+ S NS
Sbjct: 7 VAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAV 66
Query: 185 IDLKSGRNITVKIDYDGAKTVPNAVYVGFTASTGLLQESHQLLDRVFVS 233
+ + TV D D +P V VG +A+TGL +E++ +L F S
Sbjct: 67 VSYSGTSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 24 SVPITFNNFNPDSCNNGNDLICMGSVTA-GNGYLSLTPEPYSTLPPPLNKVGRVLFHQPV 82
S+ +F+ F N DLI T +G L LT S P + VGR LF+ PV
Sbjct: 127 SLHFSFHQF----SQNPKDLILQSDATTDSDGNLQLT-RVSSDGSPQGSSVGRALFYAPV 181
Query: 83 LAWP-----AMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLGIM 133
W A F TFT I K PD DG+ F +A + P G LG+
Sbjct: 182 HIWEKSAVVASFDATFTFLI-KSPDR-DPADGITFFIANTDTSIPSGSGGRLLGLF 235
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 350 LVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH--------- 399
+V EY+ +L D+ +G + K +++ AL + H+ I+H
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 400 SEYNA-RLGDLGLARLIQ---NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
S NA ++ D G+AR I N T + GT YL+PE + DVYS G V
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 456 LEVACG 461
EV G
Sbjct: 210 YEVLTG 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 326 TIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRYKILTGLAS 383
+ RL H V+L + E L Y NG L +I K F + TR+ + S
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 140
Query: 384 ALLYLHEECDKPIVH----------HSEYNARLGDLGLARLI--QNDACVTTMMAGTPGY 431
AL YLH K I+H + + + ++ D G A+++ ++ GT Y
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 432 LAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++PE+ A D+++ G + ++ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTG-LASALLYLHE 390
H LV L L V EY+ G L + + + + + ++ AL YLHE
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 391 ECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSG 440
+ I++ SE + +L D G+ + T+ GTP Y+APE+
Sbjct: 140 ---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 441 KATPEFDVYSFGMVALEVACGR 462
D ++ G++ E+ GR
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGR 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 74 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLA--RLIQNDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 133 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTG-LASALLYLHE 390
H LV L L V EY+ G L + + + + + ++ AL YLHE
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 391 ECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSG 440
+ I++ SE + +L D G+ + T+ GTP Y+APE+
Sbjct: 125 ---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 441 KATPEFDVYSFGMVALEVACGR 462
D ++ G++ E+ GR
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGR 203
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 82 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLA--RLIQNDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 141 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 350 LVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH--------- 399
+V EY+ +L D+ +G + K +++ AL + H+ I+H
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 400 SEYNA-RLGDLGLARLIQ---NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
S NA ++ D G+AR I N T + GT YL+PE + DVYS G V
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 456 LEVACG 461
EV G
Sbjct: 210 YEVLTG 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 54 EVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLA--RLIQNDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 113 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 350 LVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH--------- 399
+V EY+ +L D+ +G + K +++ AL + H+ I+H
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 400 SEYNA-RLGDLGLARLIQ---NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
S NA ++ D G+AR I N T + GT YL+PE + DVYS G V
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 456 LEVACG 461
EV G
Sbjct: 210 YEVLTG 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 394 ------KP--IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPE 445
KP I+ +S +L D G++ + ++ + GT Y++PE + +
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE--MANEFVGTRSYMSPERLQGTHYSVQ 186
Query: 446 FDVYSFGMVALEVACGRRSKGLFEENSLVDYV 477
D++S G+ +E+A GR + L+DY+
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHE 390
H N++QL+ LV++ M G L D K L K KI+ L + LH+
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 391 ECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEV 436
IVH + N +L D G + + + ++ GTP YLAPE+
Sbjct: 143 ---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV-CGTPSYLAPEI 194
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ G F L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 42/197 (21%)
Query: 296 SYKQLQKATHNFSKENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEY 354
+ K L+ H KE L+ +E+ + L +H+N+V L G C +L++ EY
Sbjct: 65 AVKMLKSTAHADEKEALM--------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116
Query: 355 MANGSLDLFIGKGF------------------------LDWKTRYKILTGLASALLYLHE 390
G L F+ + L+ + + +A + +L
Sbjct: 117 CCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS 176
Query: 391 E-------CDKPIVHHSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGK 441
+ + ++ + + A++GD GLAR I ND+ + A P ++APE F
Sbjct: 177 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 236
Query: 442 ATPEFDVYSFGMVALEV 458
T + DV+S+G++ E+
Sbjct: 237 YTVQSDVWSYGILLWEI 253
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 316 GEREYLAEICTIGRLRHKNLVQLRG--WCHEREHLLLVYEYMANG---SLDLFIGKGFLD 370
GE EI + RLRHKN++QL + E++ + +V EY G LD K F
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 371 WKTRYKILTGLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQ---- 416
+ + L L YLH + IVH + ++ LG+A +
Sbjct: 109 CQA-HGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164
Query: 417 NDACVTTMMAGTPGYLAPEV-----SFSGKATPEFDVYSFGMVALEVACG 461
+D C T+ G+P + PE+ +FSG + D++S G+ + G
Sbjct: 165 DDTCRTSQ--GSPAFQPPEIANGLDTFSGF---KVDIWSAGVTLYNITTG 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGF-----------LDWKT 373
+HKN++ L G C + L ++ Y + G+L ++ G + + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
LA + YL H + V +E N ++ D GLAR I N D T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 350 LVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH--------- 399
+V EY+ +L D+ +G + K +++ AL + H+ I+H
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILI 149
Query: 400 SEYNA-RLGDLGLARLIQ---NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
S NA ++ D G+AR I N T + GT YL+PE + DVYS G V
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 456 LEVACG 461
EV G
Sbjct: 210 YEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 350 LVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH--------- 399
+V EY+ +L D+ +G + K +++ AL + H+ I+H
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 166
Query: 400 SEYNA-RLGDLGLARLIQ---NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
S NA ++ D G+AR I N T + GT YL+PE + DVYS G V
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 456 LEVACG 461
EV G
Sbjct: 227 YEVLTG 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 294 LFSYKQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYE 353
L++ K L+KAT ++ + K ER+ LA++ H +V+L L L+ +
Sbjct: 58 LYAMKVLKKATLKV-RDRVRTKMERDILADV------NHPFVVKLHYAFQTEGKLYLILD 110
Query: 354 YMANGSLDLFIGKGFLDWKTRYKI-LTGLASALLYLHE-----ECDKP--IVHHSEYNAR 405
++ G L + K + + K L LA L +LH KP I+ E + +
Sbjct: 111 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIK 170
Query: 406 LGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
L D GL++ + GT Y+APEV + D +S+G++ E+ G
Sbjct: 171 LTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 20/142 (14%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYK----------ILTGL--- 381
L QL + L V EY+ G L I + R+K I GL
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFL 137
Query: 382 -ASALLYLHEECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSG 440
+ ++Y + D ++ SE + ++ D G+ + D T GTP Y+APE+
Sbjct: 138 QSKGIIYRDLKLDN-VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 441 KATPEFDVYSFGMVALEVACGR 462
D ++FG++ E+ G+
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 10/137 (7%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK--GFLDWKTRY---KILTGL----ASAL 385
L QL + L V EY+ G L I + F + + +I GL + +
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 386 LYLHEECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPE 445
+Y + D ++ SE + ++ D G+ + D T GTP Y+APE+
Sbjct: 464 IYRDLKLDN-VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 446 FDVYSFGMVALEVACGR 462
D ++FG++ E+ G+
Sbjct: 523 VDWWAFGVLLYEMLAGQ 539
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 14/139 (10%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
L QL + L V EY+ G L I + G ++ L +LH+
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK--- 138
Query: 394 KPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKAT 443
+ I++ SE + ++ D G+ + D T GTP Y+APE+
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 444 PEFDVYSFGMVALEVACGR 462
D +++G++ E+ G+
Sbjct: 199 KSVDWWAYGVLLYEMLAGQ 217
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 348 LLLVYEYMANGSLDLFIGKGF---LDWKTRYKILTGLASALLYLHEECDKPIVHHS---- 400
L + E+ G+L+ +I K LD ++ + + Y+H K ++H
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPS 165
Query: 401 ------EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
++GD GL ++ND T GT Y++PE S E D+Y+ G++
Sbjct: 166 NIFLVDTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 455 ALEV--ACGR--RSKGLFEE--NSLVDYVWSLYGKNALLECVDKQLEGEFDEEQVKRTLT 508
E+ C + F + + ++ ++ K L + + K+ E + ++ RTLT
Sbjct: 225 LAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 284
Query: 509 V 509
V
Sbjct: 285 V 285
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--------GK 366
K E++ E + + H +LV+L G C + LV + M +G L ++ +
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQ 117
Query: 367 GFLDWKTRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQNDA 419
L+W + +A ++YL E + ++ S + ++ D GLARL++ D
Sbjct: 118 LLLNWCVQ------IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 420 CVTTMMAGTP--GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
G ++A E K T + DV+S+G+ E+
Sbjct: 172 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 15/116 (12%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHE 390
H N++QL+ LV++ M G L D K L K KI+ L + LH+
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 391 ECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEV 436
IVH + N +L D G + + + + GTP YLAPE+
Sbjct: 130 ---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV-CGTPSYLAPEI 181
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI--------GK 366
K E++ E + + H +LV+L G C + LV + M +G L ++ +
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 367 GFLDWKTRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQNDA 419
L+W + +A ++YL E + ++ S + ++ D GLARL++ D
Sbjct: 141 LLLNWCVQ------IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
Query: 420 CVTTMMAGTP--GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
G ++A E K T + DV+S+G+ E+
Sbjct: 195 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T +AGTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ + L +V ++ SL L I + + I
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQ--NDACVTTMMAGT 428
A + YLH K I+H H + ++GD GLA + + + ++G+
Sbjct: 113 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACGR 462
++APEV P + DVY+FG+V E+ G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 15/116 (12%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHE 390
H N++QL+ LV++ M G L D K L K KI+ L + LH+
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 391 ECDKPIVHHS----------EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEV 436
IVH + N +L D G + + + + GTP YLAPE+
Sbjct: 143 ---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV-CGTPSYLAPEI 194
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D GLA+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 KVTDFGLAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 323 EICTIGRLRHKNLVQLRGWCHE--REHLLLVYEYMANGS-LDLFIGKGFLDWKTRYKILT 379
EI + +L H N+V+L + +HL +V+E + G +++ K + + R+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF-YFQ 144
Query: 380 GLASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTTMMAGTP 429
L + YLH + I+H + + ++ D G++ + + + GTP
Sbjct: 145 DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 430 GYLAPEV------SFSGKATPEFDVYSFGM 453
++APE FSGKA DV++ G+
Sbjct: 202 AFMAPESLSETRKIFSGKA---LDVWAMGV 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANG---------SLDLFIGKGFLDW 371
+ E+ + L+H+N+++L+ H L L++EY N + + + K FL
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFL-- 138
Query: 372 KTRYKILTGL---------------ASALLYLHEECDKPIVHHSEYNARLGDLGLARLIQ 416
Y+++ G+ + LL + + + P++ ++GD GLAR
Sbjct: 139 ---YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVL-------KIGDFGLARAFG 188
Query: 417 NDACVTTMMAGTPGYLAPEVSFSGKA-TPEFDVYSFGMVALEVACGRRSKGLFEENSLVD 475
T T Y PE+ + + D++S + E+ LF +S +D
Sbjct: 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM---KTPLFPGDSEID 245
Query: 476 YVWSLY 481
++ ++
Sbjct: 246 QLFKIF 251
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLF-----IGKGFLDWKTRYKILTGLASALLYLH 389
LV+L + +L +V EYM G D+F IG+ F + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGR-FSEPHARF-YAAQIVLTFEYLH 158
Query: 390 E--------ECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGK 441
+ + ++ Y ++ D G A+ ++ T + GTP YLAPE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVKGR---TWXLCGTPEYLAPEIILSKG 214
Query: 442 ATPEFDVYSFGMVALEVACG 461
D ++ G++ E+A G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLF-----IGKGFLDWKTRYKILTGLASALLYLH 389
LV+L + +L +V EYM G D+F IG+ F + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGR-FSEPHARF-YAAQIVLTFEYLH 158
Query: 390 E--------ECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGK 441
+ + ++ Y ++ D G A+ ++ T + GTP YLAPE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVKGR---TWXLCGTPEYLAPEIILSKG 214
Query: 442 ATPEFDVYSFGMVALEVACG 461
D ++ G++ E+A G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 350 LVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD------KP--IVHHS 400
+ E+M GSLD + K G + + K+ + L YL E+ KP I+ +S
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 159
Query: 401 EYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVA 459
+L D G++ +LI + A GT Y++PE + + D++S G+ +E+A
Sbjct: 160 RGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 216
Query: 460 CGRR-------SKGLFEENSLVDYV 477
GR S +FE L+DY+
Sbjct: 217 VGRYPIGSGSGSMAIFE---LLDYI 238
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 324 ICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTGL 381
+ IG L H ++V+L G C L LV +Y+ GSL + +G L + +
Sbjct: 84 MLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI 142
Query: 382 ASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQ-NDACVTTMMAGTP-GYL 432
A + YL E + ++ S ++ D G+A L+ +D + A TP ++
Sbjct: 143 AKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 433 APEVSFSGKATPEFDVYSFGMVALEV 458
A E GK T + DV+S+G+ E+
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWEL 228
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 KVADFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + + GT Y++PE +
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV 244
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 245 QSDIWSMGLSLVEMAVGR 262
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D GLA+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGLAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 KVADFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 324 ICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTGL 381
+ IG L H ++V+L G C L LV +Y+ GSL + +G L + +
Sbjct: 66 MLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI 124
Query: 382 ASALLYLHEE-------CDKPIVHHSEYNARLGDLGLARLIQ-NDACVTTMMAGTP-GYL 432
A + YL E + ++ S ++ D G+A L+ +D + A TP ++
Sbjct: 125 AKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 433 APEVSFSGKATPEFDVYSFGMVALEV 458
A E GK T + DV+S+G+ E+
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWEL 210
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 23/178 (12%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
K L KA N+S+ + + +L HK+LV G C + +LV E++
Sbjct: 46 KVLDKAHRNYSES---------FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKF 96
Query: 358 GSLDLFI--GKGFLDWKTRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGD 408
GSLD ++ K ++ + ++ LA+A+ +L E C K I+ E + + G+
Sbjct: 97 GSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
Query: 409 LGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPE-----FDVYSFGMVALEVACG 461
+L +T + P V P+ D +SFG E+ G
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + A GT Y++PE +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSV 182
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 322 AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK----GFL-DWKTRYK 376
A IC + L+H ++V+L L +V+E+M L I K GF+
Sbjct: 77 ASICHM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 377 ILTGLASALLYLHEECDKPIVHH----------SEYNA---RLGDLGLARLIQNDACVTT 423
+ + AL Y H D I+H S+ N+ +LGD G+A + V
Sbjct: 135 YMRQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG 191
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GTP ++APEV DV+ G++ + G
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 331 RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG-----------------KGFLDWKT 373
+HKN++ L G C + L ++ EY + G+L ++ + L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 374 RYKILTGLASALLYL------HEECDKPIVHHSEYNA-RLGDLGLARLIQN-DACVTTMM 425
+A + YL H + V +E N ++ D GLAR I + D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 426 AGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + + GT Y++PE +
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV 209
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 210 QSDIWSMGLSLVEMAVGR 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 KVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 KVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 KVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 KVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 KVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 KVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + A GT Y++PE +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSV 182
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 23/178 (12%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
K L KA N+S+ + + +L HK+LV G C + +LV E++
Sbjct: 46 KVLDKAHRNYSES---------FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKF 96
Query: 358 GSLDLFI--GKGFLDWKTRYKILTGLASALLYLHEE-------CDKPIVHHSEYNARLGD 408
GSLD ++ K ++ + ++ LA A+ +L E C K I+ E + + G+
Sbjct: 97 GSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
Query: 409 LGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPE-----FDVYSFGMVALEVACG 461
+L +T + P V P+ D +SFG E+ G
Sbjct: 157 PPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 202 QVTDFGFAKRVKG---ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + A GT Y++PE +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSV 182
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 314 GKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWK 372
G E E+ + +RH N++ L + ++L+ E ++ G L D K L
Sbjct: 56 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 115
Query: 373 TRYKILTGLASALLYLHEECDKPIVHHS---------EYNA-----RLGDLGLARLIQND 418
+ L + + YLH K I H + N +L D G+A I+
Sbjct: 116 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ E D++S G++ + G
Sbjct: 173 NEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 174 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 174 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 168 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 403 NARLGDLGLARLIQ-NDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
+LGD GL L++ A + G P Y+APE+ G DV+S G+ LEVAC
Sbjct: 195 RCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVAC 250
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + A GT Y++PE +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSV 182
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-GFLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + K G + + K+ + L YL E+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + A GT Y++PE +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSV 182
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 382 ASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 124 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 179
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 176 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 385 LLYLHEECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
L+Y + + I+ Y ++ D G A+ ++ T + GTP YLAPE+ S
Sbjct: 162 LIYRDLKPENLIIDQQGY-IQVTDFGFAKRVKGR---TWXLCGTPEYLAPEIIISKGYNK 217
Query: 445 EFDVYSFGMVALEVACG 461
D ++ G++ E+A G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 314 GKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWK 372
G E E+ + +RH N++ L + ++L+ E ++ G L D K L
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 108
Query: 373 TRYKILTGLASALLYLHEECDKPIVHHS---------EYNA-----RLGDLGLARLIQND 418
+ L + + YLH K I H + N +L D G+A I+
Sbjct: 109 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ E D++S G++ + G
Sbjct: 166 NEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 382 ASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 124 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 179
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 314 GKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWK 372
G E E+ + +RH N++ L + ++L+ E ++ G L D K L
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 129
Query: 373 TRYKILTGLASALLYLHEECDKPIVHHS---------EYNA-----RLGDLGLARLIQND 418
+ L + + YLH K I H + N +L D G+A I+
Sbjct: 130 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 419 ACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ GTP ++APE+ E D++S G++ + G
Sbjct: 187 NEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 382 ASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 123 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 178
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 207
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 29/154 (18%)
Query: 322 AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI------GKGFLDWKTRY 375
AEI + L H N++++ + ++ +V E G L I GK +
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA- 127
Query: 376 KILTGLASALLYLHEECDKPIVH---------------HSEYNARLGDLGLARLIQNDAC 420
+++ + +AL Y H + +VH HS ++ D GLA L ++D
Sbjct: 128 ELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSP--IKIIDFGLAELFKSDEH 182
Query: 421 VTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMV 454
+T AGT Y+APEV F T + D++S G+V
Sbjct: 183 -STNAAGTALYMAPEV-FKRDVTFKCDIWSAGVV 214
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 167 QVTDFGFAKRVKGR---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 382 ASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 124 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 179
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 182 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL--DLFIGKGFLDWKTRYKILTG 380
E+ + + RH N++ G+ +++L +V ++ SL L + + I
Sbjct: 82 EVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140
Query: 381 LASALLYLHEECDKPIVH----------HSEYNARLGDLGLARLIQNDACVTTMM--AGT 428
A + YLH K I+H H ++GD GLA + + + G+
Sbjct: 141 TAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 429 PGYLAPEVSFSGKATP---EFDVYSFGMVALEVACG 461
++APEV P + DVYS+G+V E+ G
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 202 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 382 ASALLYLHEECDKPIVH-------------HSEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 130 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 185
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 214
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ E+A G
Sbjct: 202 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 382 ASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 263 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 318
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI + +L H +++++ + + E +V E M G L D +G L T +
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 382 ASALLYLHEECDKPIVHH-------------SEYNARLGDLGLARLIQNDACVTTMMAGT 428
A+ YLHE I+H + ++ D G ++++ + + T+ GT
Sbjct: 249 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 304
Query: 429 PGYLAPEVSFS-GKA--TPEFDVYSFGMV 454
P YLAPEV S G A D +S G++
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 403 NARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEVSFS-----GKATPEFDVYSFGMVAL 456
+ RL D G + +D V + +A GTP Y++PE+ + GK PE D +S G+
Sbjct: 229 HIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMY 288
Query: 457 EVACGRRSKGLFEENSLVDYVWSLYGK 483
E+ G F SLV+ YGK
Sbjct: 289 EMLYGETP---FYAESLVE----TYGK 308
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 403 NARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEVSFS-----GKATPEFDVYSFGMVAL 456
+ RL D G + +D V + +A GTP Y++PE+ + GK PE D +S G+
Sbjct: 213 HIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMY 272
Query: 457 EVACGRRSKGLFEENSLVDYVWSLYGK 483
E+ G F SLV+ YGK
Sbjct: 273 EMLYGETP---FYAESLVE----TYGK 292
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 309 KENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREH-LLLVYEYMANGSLDLFIGK 366
KE R ++E+ + + H N+V L G C + L+++ E+ G+L ++
Sbjct: 66 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 367 G---FLDWKTRYKILTGLASALLY----------------LHEECDKPIVHHSEYNA-RL 406
F+ +K YK L + Y +H + + SE N ++
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
Query: 407 GDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
D GLAR I D V A P ++APE F T + DV+SFG++ E+
Sbjct: 186 XDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 112
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 34/192 (17%)
Query: 300 LQKAT-HNFSKENLLGKGER---EYLAEICTIGRLRHKNLVQLRGWCH---------ERE 346
+ +AT H F+ + + ER E L E+ R L Q+ G H
Sbjct: 114 VHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173
Query: 347 HLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS----- 400
+ LV++ M G L D K L K I+ L A+ +LH IVH
Sbjct: 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPEN 230
Query: 401 -----EYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEV-SFSGKAT-----PEFDVY 449
RL D G + ++ + + GTPGYLAPE+ S T E D++
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGEKLREL-CGTPGYLAPEILKCSMDETHPGYGKEVDLW 289
Query: 450 SFGMVALEVACG 461
+ G++ + G
Sbjct: 290 ACGVILFTLLAG 301
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 19/146 (13%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG--FLDWKTRYKILTGLASALLYLH 389
H N+V+L H++ H LV E + G L I K F + + Y I+ L SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-IMRKLVSAVSHMH 123
Query: 390 EECDKPIVH-------------HSEYNARLGDLGLARLIQNDACVTTMMAGTPGYLAPEV 436
D +VH + ++ D G ARL D T Y APE+
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 437 SFSGKATPEFDVYSFGMVALEVACGR 462
D++S G++ + G+
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 15/152 (9%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLL--LVYEYMANGSL-DLFIGKGFLDWKTRYKILT 379
EIC L H+N+V+ G H RE + L EY + G L D + +
Sbjct: 54 EICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 111
Query: 380 GLASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPG 430
L + ++YLH KP ++ N ++ D GLA + + N + M GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 431 YLAPEVSFSGKATPE-FDVYSFGMVALEVACG 461
Y+APE+ + E DV+S G+V + G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 309 KENLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHEREH-LLLVYEYMANGSLDLFIGK 366
KE R ++E+ + + H N+V L G C + L+++ E+ G+L ++
Sbjct: 66 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 367 G---FLDWKTRYKILTGLASALLY----------------LHEECDKPIVHHSEYNA-RL 406
F+ +K YK L + Y +H + + SE N ++
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
Query: 407 GDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
D GLAR I D V A P ++APE F T + DV+SFG++ E+
Sbjct: 186 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 317 EREYL-AEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---GFLDW 371
ERE L +E+ + L H N+V L G C L++ EY G L F+ + F+
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 372 KTR--------------------YKILTG---LASALLYLHEECDKPIVHHSEYNARLGD 408
KT Y++ G LAS + + I+ ++ D
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 204
Query: 409 LGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
GLAR I+ND+ V A P ++APE F+ T E DV+S+G+ E+
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVA 455
+ ++ D G++R I AC + GTP YLAPE+ T D+++ G++A
Sbjct: 172 DIKIVDFGMSRKI-GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 15/152 (9%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLL--LVYEYMANGSL-DLFIGKGFLDWKTRYKILT 379
EIC L H+N+V+ G H RE + L EY + G L D + +
Sbjct: 55 EICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 112
Query: 380 GLASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPG 430
L + ++YLH KP ++ N ++ D GLA + + N + M GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 431 YLAPEVSFSGKATPE-FDVYSFGMVALEVACG 461
Y+APE+ + E DV+S G+V + G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 317 EREYL-AEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---GFLDW 371
ERE L +E+ + L H N+V L G C L++ EY G L F+ + F+
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 372 KTR--------------------YKILTG---LASALLYLHEECDKPIVHHSEYNARLGD 408
KT Y++ G LAS + + I+ ++ D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 409 LGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
GLAR I+ND+ V A P ++APE F+ T E DV+S+G+ E+
Sbjct: 212 FGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQN 417
+ ++ +A + YL+ K VH ++ ++GD G+ R I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 418 DACVTTMMAGT--PGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A G ++APE G T D++SFG+V E+
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EIC L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 317 EREYL-AEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---GFLDW 371
ERE L +E+ + L H N+V L G C L++ EY G L F+ + F+
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 372 KTR--------------------YKILTG---LASALLYLHEECDKPIVHHSEYNARLGD 408
KT Y++ G LAS + + I+ ++ D
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188
Query: 409 LGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
GLAR I+ND+ V A P ++APE F+ T E DV+S+G+ E+
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAPE+ S D ++ G++ ++A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRY---KILTGLASA- 384
+ + QL + +L LV EY G L + G+ R+ +I+ + S
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 385 -LLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEV---- 436
L Y+H + KP I+ + RL D G ++ D V +++A GTP YL+PE+
Sbjct: 180 RLGYVHRDI-KPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 437 ---SFSGKATPEFDVYSFGMVALEVACGR 462
+G PE D ++ G+ A E+ G+
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
+++ A K+ L E+ +++E + L H ++V+L G E E ++ E
Sbjct: 35 EKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPY 92
Query: 358 GSLDLFIGKGFLDWKTRYKILT------GLASALLYL------HEECD-KPIVHHSEYNA 404
G L ++ + K K+LT + A+ YL H + + I+ S
Sbjct: 93 GELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECV 148
Query: 405 RLGDLGLARLIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+LGD GL+R I+++ + P +++PE + T DV+ F + E+ +
Sbjct: 149 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
Query: 464 SKGLFEENS 472
+ EN
Sbjct: 209 QPFFWLENK 217
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 317 EREYL-AEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---GFLDW 371
ERE L +E+ + L H N+V L G C L++ EY G L F+ + F+
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 372 KTR--------------------YKILTG---LASALLYLHEECDKPIVHHSEYNARLGD 408
KT Y++ G LAS + + I+ ++ D
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 206
Query: 409 LGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
GLAR I+ND+ V A P ++APE F+ T E DV+S+G+ E+
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 317 EREYL-AEICTIGRL-RHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK---GFLDW 371
ERE L +E+ + L H N+V L G C L++ EY G L F+ + F+
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 372 KTR--------------------YKILTG---LASALLYLHEECDKPIVHHSEYNARLGD 408
KT Y++ G LAS + + I+ ++ D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 409 LGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
GLAR I+ND+ V A P ++APE F+ T E DV+S+G+ E+
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 385 LLYLHEECDKP--IVHHSEYNARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEV----- 436
L Y+H + KP I+ + RL D G + D V + +A GTP Y++PE+
Sbjct: 194 LHYVHRDI-KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 437 SFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLYGK 483
G+ PE D +S G+ E+ G F SLV+ YGK
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETP---FYAESLVE----TYGK 292
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 34/171 (19%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-------- 366
+ E ++L E I +L H+N+V+ G + ++ E MA G L F+ +
Sbjct: 90 QDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 149
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHH--SEYN-----------ARLGDLGLAR 413
L + +A YL E +H + N A++GD G+AR
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 414 LI------QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
I + C + P PE G T + D +SFG++ E+
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMP----PEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 20/188 (10%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
+++ A K+ L E+ +++E + L H ++V+L G E E ++ E
Sbjct: 51 EKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPY 108
Query: 358 GSLDLFIGKGFLDWKTRYKILT------GLASALLYL------HEECD-KPIVHHSEYNA 404
G L ++ + K K+LT + A+ YL H + + I+ S
Sbjct: 109 GELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECV 164
Query: 405 RLGDLGLARLIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+LGD GL+R I+++ + P +++PE + T DV+ F + E+ +
Sbjct: 165 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
Query: 464 SKGLFEEN 471
+ EN
Sbjct: 225 QPFFWLEN 232
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 34/171 (19%)
Query: 315 KGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-------- 366
+ E ++L E I +L H+N+V+ G + ++ E MA G L F+ +
Sbjct: 76 QDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 135
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHH--SEYN-----------ARLGDLGLAR 413
L + +A YL E +H + N A++GD G+AR
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 414 LI------QNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV 458
I + C + P PE G T + D +SFG++ E+
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMP----PEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 116 KKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 174
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + +L K VH ++
Sbjct: 175 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 231
Query: 405 RLGDLGLARLIQN---DACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
++ D GLAR + + D+ A P ++A E + K T + DV+SFG++ E+
Sbjct: 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
Query: 461 GRRSKGLFEENSLVDYVWSLYGKNALLE--CVDKQLEGEFDEEQVKRTLTVGFASLHPDC 518
R + + N+ V+ L G+ L C D E V HP
Sbjct: 292 -RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKA 337
Query: 519 MLRPKIRKVV 528
+RP ++V
Sbjct: 338 EMRPSFSELV 347
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMAN 357
+++ A K+ L E+ +++E + L H ++V+L G E E ++ E
Sbjct: 39 EKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPY 96
Query: 358 GSLDLFIGKGFLDWKTRYKILT------GLASALLYL------HEECD-KPIVHHSEYNA 404
G L ++ + K K+LT + A+ YL H + + I+ S
Sbjct: 97 GELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECV 152
Query: 405 RLGDLGLARLIQNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRR 463
+LGD GL+R I+++ + P +++PE + T DV+ F + E+ +
Sbjct: 153 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
Query: 464 SKGLFEENS 472
+ EN
Sbjct: 213 QPFFWLENK 221
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 57 KKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + +L K VH ++
Sbjct: 116 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 405 RLGDLGLARLIQN---DACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
++ D GLAR + + D+ A P ++A E + K T + DV+SFG++ E+
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 461 GRRSKGLFEENSLVDYVWSLYGKNALLE--CVDKQLEGEFDEEQVKRTLTVGFASLHPDC 518
R + + N+ V+ L G+ L C D E V HP
Sbjct: 233 -RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKA 278
Query: 519 MLRPKIRKVV 528
+RP ++V
Sbjct: 279 EMRPSFSELV 288
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 343 HEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH 399
H + LL++ E M G L I G + +I+ + +A+ +LH I H
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHR 133
Query: 400 -----------SEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEF 446
E +A +L D G A+ +A T TP Y+APEV K
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY--TPYYVAPEVLGPEKYDKSC 191
Query: 447 DVYSFGMVALEVACG 461
D++S G++ + CG
Sbjct: 192 DMWSLGVIMYILLCG 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQN 417
+ ++ +A + YL+ K VH ++ ++GD G+ R I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 418 DACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
G G ++APE G T D++SFG+V E+
Sbjct: 183 ---TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQN 417
+ ++ +A + YL+ K VH ++ ++GD G+ R I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 418 DACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
G G ++APE G T D++SFG+V E+
Sbjct: 183 ---TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 343 HEREHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHEECDKPIVHH 399
H + LL++ E M G L I G + +I+ + +A+ +LH I H
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHR 152
Query: 400 -----------SEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEF 446
E +A +L D G A+ +A T TP Y+APEV K
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY--TPYYVAPEVLGPEKYDKSC 210
Query: 447 DVYSFGMVALEVACG 461
D++S G++ + CG
Sbjct: 211 DMWSLGVIMYILLCG 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLIQN 417
+ ++ +A + YL+ K VH ++ ++GD G+ R I
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 418 DACVTTMMAGTPG-----YLAPEVSFSGKATPEFDVYSFGMVALEV 458
G G ++APE G T D++SFG+V E+
Sbjct: 180 ---TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 19/169 (11%)
Query: 308 SKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGK 366
+K + G + E+ + ++H N++ L + ++L+ E +A G L D K
Sbjct: 49 TKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 367 GFLDWKTRYKILTGLASALLYLHEECDKPIVHHS--------------EYNARLGDLGLA 412
L + + L + + + YLH I H + ++ D GLA
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 413 RLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
I + GTP ++APE+ E D++S G++ + G
Sbjct: 166 HKIDFGNEFKNIF-GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 36/229 (15%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQN---DACVT 422
GL A + +L K VH ++ ++ D GLAR + + D+
Sbjct: 142 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 198
Query: 423 TMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVACGRRSKGLFEENSLVDYVWSLY 481
A P ++A E + K T + DV+SFG++ E+ R + + N+ V+ L
Sbjct: 199 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQ 257
Query: 482 GKNALLE--CVDKQLEGEFDEEQVKRTLTVGFASLHPDCMLRPKIRKVV 528
G+ L C D E V HP +RP ++V
Sbjct: 258 GRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMRPSFSELV 293
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGKG-FLDWKTRYKILTGLASALLYLHEECD 393
+V G + + + E+M GSLD + + + + K+ + L YL E+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 394 ------KP--IVHHSEYNARLGDLGLA-RLIQNDACVTTMMAGTPGYLAPEVSFSGKATP 444
KP I+ +S +L D G++ +LI + A GT Y+APE +
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMAPERLQGTHYSV 192
Query: 445 EFDVYSFGMVALEVACGR 462
+ D++S G+ +E+A GR
Sbjct: 193 QSDIWSMGLSLVELAVGR 210
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 23/158 (14%)
Query: 322 AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK----GFL-DWKTRYK 376
A IC + L+H ++V+L L +V+E+M L I K GF+
Sbjct: 79 ASICHM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 377 ILTGLASALLYLHEECDKPIVHH----------SEYNA---RLGDLGLARLIQNDACVTT 423
+ + AL Y H D I+H S+ N+ +LG G+A + V
Sbjct: 137 YMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 193
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GTP ++APEV DV+ G++ + G
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQN---DACVT 422
GL A + +L K VH ++ ++ D GLAR + + D+
Sbjct: 137 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 423 TMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 55 KKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 113
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + +L K VH ++
Sbjct: 114 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 405 RLGDLGLARLIQN---DACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
++ D GLAR + + D+ A P ++A E + K T + DV+SFG++ E+
Sbjct: 171 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQN---DACVT 422
GL A + +L K VH ++ ++ D GLAR + + D+
Sbjct: 138 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 194
Query: 423 TMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 195 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 23/158 (14%)
Query: 322 AEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK----GFL-DWKTRYK 376
A IC + L+H ++V+L L +V+E+M L I K GF+
Sbjct: 77 ASICHM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 377 ILTGLASALLYLHEECDKPIVHH----------SEYNA---RLGDLGLARLIQNDACVTT 423
+ + AL Y H D I+H S+ N+ +LG G+A + V
Sbjct: 135 YMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 191
Query: 424 MMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
GTP ++APEV DV+ G++ + G
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 353 EYMANGSLDLFIGKGFLDWKTRYKILTGLA----SALLYLHEE--CDKPI-------VHH 399
E NGS+ F + LD+ R K+++ + SAL YLH + C + I +
Sbjct: 147 EEAINGSIHGF--RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Query: 400 SEYNARLGDLGLAR----LIQNDACVTTMMAGTPGYLAPEVSFSGKAT--PEFDVYSFGM 453
+ +L D GL++ L + T AGTP ++APEV + + P+ D +S G+
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 454 V 454
+
Sbjct: 265 L 265
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLH-----EECDKP- 395
R+ LL+V E + G L I G + +I+ + A+ YLH KP
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 190
Query: 396 -IVHHSEY-NA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+++ S+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 250 GVIMYILLCG 259
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 403 NARLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEV--AC 460
++GD GL ++ND GT Y++PE S E D+Y+ G++ E+ C
Sbjct: 160 QVKIGDFGLVTSLKNDG-KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218
Query: 461 GR--RSKGLFEE--NSLVDYVWSLYGKNALLECVDKQLEGEFDEEQVKRTLTV 509
+ F + + ++ ++ K L + + K+ E + ++ RTLTV
Sbjct: 219 DTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP YLAP + S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 35/164 (21%)
Query: 321 LAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYM----------ANGSLDLFIGKGFLD 370
+ E+ + L+H N+V L H + L LV+EY+ +++ K FL
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFL- 106
Query: 371 WKTRYKILTGLASALLYLHEECDKPIVHHSEYN-----------ARLGDLGLARLIQNDA 419
+++L GLA C + V H + +L D GLAR
Sbjct: 107 ----FQLLRGLAY--------CHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154
Query: 420 CVTTMMAGTPGYLAPEVSF-SGKATPEFDVYSFGMVALEVACGR 462
T Y P++ S + + D++ G + E+A GR
Sbjct: 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQN---DACVT 422
GL A + +L K VH ++ ++ D GLAR + + D+
Sbjct: 138 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHN 194
Query: 423 TMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 195 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHE--------ECD 393
R+ LL+V E + G L I G + +I+ + A+ YLH + +
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 151
Query: 394 KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 211 GVIMYILLCG 220
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHE--------ECD 393
R+ LL+V E + G L I G + +I+ + A+ YLH + +
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 152
Query: 394 KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 212 GVIMYILLCG 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHE--------ECD 393
R+ LL+V E + G L I G + +I+ + A+ YLH + +
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 150
Query: 394 KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 210 GVIMYILLCG 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLH-----EECDKP- 395
R+ LL+V E + G L I G + +I+ + A+ YLH KP
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 396 -IVHHSEY-NA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+++ S+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 206 GVIMYILLCG 215
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLH-----EECDKP- 395
R+ LL+V E + G L I G + +I+ + A+ YLH KP
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 396 -IVHHSEY-NA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+++ S+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 206 GVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLH-----EECDKP- 395
R+ LL+V E + G L I G + +I+ + A+ YLH KP
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 196
Query: 396 -IVHHSEY-NA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+++ S+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 256 GVIMYILLCG 265
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTT-- 423
GL A + YL K VH ++ ++ D GLAR + + +
Sbjct: 136 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHN 192
Query: 424 -MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 193 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLI-Q 416
+ ++ +A + YL+ K VH + ++ ++GD G+ R I +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
D P ++APE G T D++SFG+V E+
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHE--------ECD 393
R+ LL+V E + G L I G + +I+ + A+ YLH + +
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 160
Query: 394 KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 220 GVIMYILLCG 229
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLH-----EECDKP- 395
R+ LL+V E + G L I G + +I+ + A+ YLH KP
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 396 -IVHHSEY-NA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+++ S+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 204 GVIMYILLCG 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLI-Q 416
+ ++ +A + YL+ K VH + ++ ++GD G+ R I +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
D P ++APE G T D++SFG+V E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLH-----EECDKP- 395
R+ LL+V E + G L I G + +I+ + A+ YLH KP
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 145
Query: 396 -IVHHSEY-NA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+++ S+ NA +L D G A+ + +TT TP Y+APEV K D++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 205 GVIMYILLCG 214
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 404 ARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
++ D GLAR I +D+ V A P ++APE F G T + DV+S+G++ E+
Sbjct: 211 VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 37/250 (14%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 75 KKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 133
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + YL K VH ++
Sbjct: 134 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 190
Query: 405 RLGDLGLARLIQNDACVTT---MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
++ D GLAR + + + A P ++A E + K T + DV+SFG++ E+
Sbjct: 191 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
Query: 461 GRRSKGLFEENSLVDYVWSLYGKNALLE--CVDKQLEGEFDEEQVKRTLTVGFASLHPDC 518
R + + N+ V+ L G+ L C D E V HP
Sbjct: 251 -RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKA 296
Query: 519 MLRPKIRKVV 528
+RP ++V
Sbjct: 297 EMRPSFSELV 306
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 26/163 (15%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLI-Q 416
+ ++ +A + YL+ K VH ++ ++GD G+ R I +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
D P ++APE G T D++SFG+V E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 37/250 (14%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 76 KKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 134
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + YL K VH ++
Sbjct: 135 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 191
Query: 405 RLGDLGLARLIQNDACVTT---MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEVAC 460
++ D GLAR + + + A P ++A E + K T + DV+SFG++ E+
Sbjct: 192 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
Query: 461 GRRSKGLFEENSLVDYVWSLYGKNALLE--CVDKQLEGEFDEEQVKRTLTVGFASLHPDC 518
R + + N+ V+ L G+ L C D E V HP
Sbjct: 252 -RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKA 297
Query: 519 MLRPKIRKVV 528
+RP ++V
Sbjct: 298 EMRPSFSELV 307
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 26/163 (15%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFI-----------GKG 367
E+L E + ++V+L G + + L+V E MA+G L ++ G+
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 368 FLDWKTRYKILTGLASALLYLHEECDKPIVHHS----------EYNARLGDLGLARLI-Q 416
+ ++ +A + YL+ K VH ++ ++GD G+ R I +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 417 NDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
D P ++APE G T D++SFG+V E+
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG----KGFLDWKTRYKIL 378
EI T+ LRH LV L + ++++YE+M+ G L + K D Y +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--M 155
Query: 379 TGLASALLYLHE----ECD-KP----IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ L ++HE D KP +L D GL + V + GT
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTA 214
Query: 430 GYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ APEV+ D++S G+++ + G
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTT-- 423
GL A + YL K VH ++ ++ D GLAR + + +
Sbjct: 137 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 424 -MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIG----KGFLDWKTRYKIL 378
EI T+ LRH LV L + ++++YE+M+ G L + K D Y +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--M 261
Query: 379 TGLASALLYLHE----ECD-KP----IVHHSEYNARLGDLGLARLIQNDACVTTMMAGTP 429
+ L ++HE D KP +L D GL + V + GT
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTA 320
Query: 430 GYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
+ APEV+ D++S G+++ + G
Sbjct: 321 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 30/183 (16%)
Query: 318 REYLAEICTIGRLRHKNLVQLRGWC-HEREHL----LLVYEYMANGSLDLFIGKGFLDWK 372
R++LAE+ H ++VQ+ + H H +V EY+ SL G+ L
Sbjct: 130 RQFLAEVV------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-LPVA 182
Query: 373 TRYKILTGLASALLYLHE------ECDKPIVHHSEYNARLGDLGLARLIQNDACVTTMMA 426
L + AL YLH + + +E +L DLG I + +
Sbjct: 183 EAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG----YLY 238
Query: 427 GTPGYLAPEVSFSGKATPEFDVYSFG------MVALEVACGRRSKGLFEENSLVDYVWSL 480
GTPG+ APE+ +G T D+Y+ G + L GR GL E++ ++ +
Sbjct: 239 GTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLK-TYDS 296
Query: 481 YGK 483
YG+
Sbjct: 297 YGR 299
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 332 HKNLVQLRGWCHEREH-LLLVYEYMANGSLDLFIGKG---FLDWKT---RYKILTGLASA 384
H N+V L G C + L+++ E+ G+L ++ F+ +KT YK L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 385 LLY----------------LHEECDKPIVHHSEYNA-RLGDLGLARLIQNDA-CVTTMMA 426
+ Y +H + + SE N ++ D GLAR I D V A
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 427 GTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
P ++APE F T + DV+SFG++ E+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 49 KKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 107
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + YL K VH ++
Sbjct: 108 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 164
Query: 405 RLGDLGLARLIQNDACVTT---MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
++ D GLAR + + + A P ++A E + K T + DV+SFG++ E+
Sbjct: 165 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTT-- 423
GL A + YL K VH ++ ++ D GLAR + + +
Sbjct: 137 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 424 -MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 194 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTT-- 423
GL A + YL K VH ++ ++ D GLAR + + +
Sbjct: 136 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 192
Query: 424 -MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 193 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 298 KQLQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMA 356
K++ A + ++ +G+ ++L E + H N++ L G C E L+V YM
Sbjct: 54 KKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112
Query: 357 NGSLDLFIGKGFLDWKTRYKILTGL--ASALLYLHEECDKPIVHH----------SEYNA 404
+G L FI + + I GL A + YL K VH ++
Sbjct: 113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 169
Query: 405 RLGDLGLARLIQNDACVTT---MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
++ D GLAR + + + A P ++A E + K T + DV+SFG++ E+
Sbjct: 170 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
++ D G A+ ++ T + GTP LAPE+ S D ++ G++ E+A G
Sbjct: 181 QVTDFGFAKRVKGR---TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTT-- 423
GL A + YL K VH ++ ++ D GLAR + + +
Sbjct: 135 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 191
Query: 424 -MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 192 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 319 EYLAEICTIGRLRHKNLVQLRGWCHERE-HLLLVYEYMANGSLDLFIGKGFLDWKTRYKI 377
++L E + H N++ L G C E L+V YM +G L FI + + I
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 378 LTGL--ASALLYLHEECDKPIVHH----------SEYNARLGDLGLARLIQNDACVTT-- 423
GL A + YL K VH ++ ++ D GLAR + + +
Sbjct: 132 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 188
Query: 424 -MMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
A P ++A E + K T + DV+SFG++ E+
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 311 NLLGKGEREYLAEICTIGRL-RHKNLVQLRGWCHER------EHLLLVYEYMANGSL-DL 362
++ G E E EI + + H+N+ G ++ + L LV E+ GS+ DL
Sbjct: 58 DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 363 F-------IGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHS-----EYNARLGDLG 410
+ + ++ + R +IL GL+ L+ H+ + I + +L D G
Sbjct: 118 IKNTKGNTLKEEWIAYICR-EILRGLSH--LHQHKVIHRDIKGQNVLLTENAEVKLVDFG 174
Query: 411 LARLIQNDACVTTMMAGTPGYLAPEVSFSGK---ATPEF--DVYSFGMVALEVACG 461
++ + GTP ++APEV + AT +F D++S G+ A+E+A G
Sbjct: 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHE--------ECD 393
R+ LL+V E + G L I G + +I + A+ YLH + +
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPE 190
Query: 394 KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+ NA +L D G A+ + +TT TP Y+APEV K D +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 250 GVIXYILLCG 259
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 349 LLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECDKPIVHHSEYNARLGD 408
L E++ S + G FL +R I LA+ + L E K +V ++ D
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNILLSE---KNVV-------KICD 191
Query: 409 LGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
GLAR I D V A P ++APE F T + DV+SFG++ E+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 285 ARSAANVPILFSYKQLQKATHNFSKENLLGK-----GEREYLAEICTIGRL------RHK 333
A + + ++ K L H+ + NLLG G + E C G L +
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 128
Query: 334 NLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD 393
V + + L E++ S + G FL +R I LA+ + L E
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSE--- 183
Query: 394 KPIVHHSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSF 451
K +V ++ D GLAR I D V A P ++APE F T + DV+SF
Sbjct: 184 KNVV-------KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 452 GMVALEV 458
G++ E+
Sbjct: 237 GVLLWEI 243
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI L H+N+V+ G E L EY + G L D + + L
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 400 SEYNA-RLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
SE N ++ D GLAR I D V A P ++APE F T + DV+SFG++
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 457 EV 458
E+
Sbjct: 233 EI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 400 SEYNA-RLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
SE N ++ D GLAR I D V A P ++APE F T + DV+SFG++
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 457 EV 458
E+
Sbjct: 233 EI 234
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSL-DLFIGKGFLDWKTRYKILTGL 381
EI L H+N+V+ G E L EY + G L D + + L
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 382 ASALLYLH-----EECDKP--IVHHSEYNARLGDLGLARLIQ--NDACVTTMMAGTPGYL 432
+ ++YLH KP ++ N ++ D GLA + + N + M GT Y+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 433 APEVSFSGKATPE-FDVYSFGMVALEVACG 461
APE+ + E DV+S G+V + G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 345 REHLLLVYEYMANGSLDLFI---GKGFLDWKTRYKILTGLASALLYLHE--------ECD 393
R+ LL+V E + G L I G + +I+ + A+ YLH + +
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 394 KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSF 451
+ NA +L D G A+ + +T TP Y+APEV K D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP-CYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 452 GMVALEVACG 461
G++ + CG
Sbjct: 204 GVIMYILLCG 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 285 ARSAANVPILFSYKQLQKATHNFSKENLLGK-----GEREYLAEICTIGRL------RHK 333
A + + ++ K L H+ + NLLG G + E C G L +
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 128
Query: 334 NLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD 393
V + + L E++ S + G FL +R I LA+ + L E
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSE--- 183
Query: 394 KPIVHHSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSF 451
K +V ++ D GLAR I D V A P ++APE F T + DV+SF
Sbjct: 184 KNVV-------KICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 452 GMVALEV 458
G++ E+
Sbjct: 237 GVLLWEI 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 285 ARSAANVPILFSYKQLQKATHNFSKENLLGK-----GEREYLAEICTIGRL------RHK 333
A + + ++ K L H+ + NLLG G + E C G L +
Sbjct: 71 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 130
Query: 334 NLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD 393
V + + L E++ S + G FL +R I LA+ + L E
Sbjct: 131 EFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSE--- 185
Query: 394 KPIVHHSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSF 451
K +V ++ D GLAR I D V A P ++APE F T + DV+SF
Sbjct: 186 KNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 452 GMVALEV 458
G++ E+
Sbjct: 239 GVLLWEI 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 285 ARSAANVPILFSYKQLQKATHNFSKENLLGK-----GEREYLAEICTIGRL------RHK 333
A + + ++ K L H+ + NLLG G + E C G L +
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 128
Query: 334 NLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYKILTGLASALLYLHEECD 393
V + + L E++ S + G FL +R I LA+ + L E
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSE--- 183
Query: 394 KPIVHHSEYNARLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSF 451
K +V ++ D GLAR I D V A P ++APE F T + DV+SF
Sbjct: 184 KNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 452 GMVALEV 458
G++ E+
Sbjct: 237 GVLLWEI 243
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 400 SEYNA-RLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
SE N ++ D GLAR I D V A P ++APE F T + DV+SFG++
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 457 EV 458
E+
Sbjct: 233 EI 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 400 SEYNA-RLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
SE N ++ D GLAR I D V A P ++APE F T + DV+SFG++
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 457 EV 458
E+
Sbjct: 233 EI 234
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
R+ DLGLA + + + GT GY+APEV + + T D ++ G + E+ G+
Sbjct: 326 RISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 400 SEYNA-RLGDLGLARLIQNDA-CVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVAL 456
SE N ++ D GLAR I D V A P ++APE F T + DV+SFG++
Sbjct: 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 278
Query: 457 EV 458
E+
Sbjct: 279 EI 280
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 405 RLGDLGLARLIQNDACVTTMMAGTPGYLAPEVSFSGKATPEFDVYSFGMVALEVACGR 462
R+ DLGLA + + + GT GY+APEV + + T D ++ G + E+ G+
Sbjct: 326 RISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 33/157 (21%)
Query: 332 HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYK---ILTGLASALLYL 388
H N+V R L +V +MA GS I F+D IL G+ AL Y+
Sbjct: 69 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 389 HEECDKPIVHHSEYNARL-----GDLGLARLIQNDACVT-----TMMAGTPGY------- 431
H VH S + + G + L+ L N + ++ ++ P Y
Sbjct: 129 HH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 185
Query: 432 LAPEV------SFSGKATPEFDVYSFGMVALEVACGR 462
L+PEV + K+ D+YS G+ A E+A G
Sbjct: 186 LSPEVLQQNLQGYDAKS----DIYSVGITACELANGH 218
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 426 AGTPGYLAPEV-SFSGKATPEFDVYSFGMVALEVACGR 462
AGTPG+ APEV + T D++S G++ L + GR
Sbjct: 207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 33/159 (20%)
Query: 330 LRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFLDWKTRYK---ILTGLASALL 386
H N+V R L +V +MA GS I F+D IL G+ AL
Sbjct: 83 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 142
Query: 387 YLHEECDKPIVHHSEYNARL-----GDLGLARLIQNDACVT-----TMMAGTPGY----- 431
Y+H VH S + + G + L+ L N + ++ ++ P Y
Sbjct: 143 YIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199
Query: 432 --LAPEV------SFSGKATPEFDVYSFGMVALEVACGR 462
L+PEV + K+ D+YS G+ A E+A G
Sbjct: 200 PWLSPEVLQQNLQGYDAKS----DIYSVGITACELANGH 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFL--DWKTRYKILTGLA----SALLYL 388
+VQL + +L +V EYM G L + + W Y LA ++ ++
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 389 HEEC--DKPIVHHSEYNARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEVSFS----GK 441
H + D ++ S + +L D G + + V A GTP Y++PEV S G
Sbjct: 191 HRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 442 ATPEFDVYSFGMVALEVACG 461
E D +S G+ E+ G
Sbjct: 250 YGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFL--DWKTRYKILTGLA----SALLYL 388
+VQL + +L +V EYM G L + + W Y LA ++ ++
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 389 HEEC--DKPIVHHSEYNARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEVSFS----GK 441
H + D ++ S + +L D G + + V A GTP Y++PEV S G
Sbjct: 196 HRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 442 ATPEFDVYSFGMVALEVACG 461
E D +S G+ E+ G
Sbjct: 255 YGRECDWWSVGVFLYEMLVG 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 30/172 (17%)
Query: 310 ENLLGKGEREYLAEICTIGRLR-HKNLVQLRGWCHEREHLLLVYEYMANGSLDLFIGK-G 367
E G E+ T+ + + +KN+++L + + LV+E + GS+ I K
Sbjct: 47 EKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK 106
Query: 368 FLDWKTRYKILTGLASALLYLHEE-------------CDKPIVHHSEYNARLGDLGLARL 414
+ + +++ +A+AL +LH + C+ P ++ D L
Sbjct: 107 HFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESP---EKVSPVKICDFDLGSG 163
Query: 415 IQ-NDACV------TTMMAGTPGYLAPEV--SFSGKAT---PEFDVYSFGMV 454
++ N++C T G+ Y+APEV F+ +AT D++S G+V
Sbjct: 164 MKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVV 215
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 335 LVQLRGWCHEREHLLLVYEYMANGSLDLFIGKGFL--DWKTRYKILTGLA----SALLYL 388
+VQL + +L +V EYM G L + + W Y LA ++ ++
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 389 HEEC--DKPIVHHSEYNARLGDLGLARLIQNDACVTTMMA-GTPGYLAPEVSFS----GK 441
H + D ++ S + +L D G + + V A GTP Y++PEV S G
Sbjct: 196 HRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 442 ATPEFDVYSFGMVALEVACG 461
E D +S G+ E+ G
Sbjct: 255 YGRECDWWSVGVFLYEMLVG 274
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 323 EICTIGRLRHKNLVQLRGWCHEREHLLLVYEYMANGSLDLF--IGKGFLDWKTRYKI--L 378
EI + RH+N++ L E L++++E+++ LD+F I + R + +
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYV 108
Query: 379 TGLASALLYLHEECD-------KPIVHHSEYNA--RLGDLGLARLIQNDACVTTMMAGTP 429
+ AL +LH + I++ + ++ ++ + G AR ++ + P
Sbjct: 109 HQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA-P 167
Query: 430 GYLAPEVSFSGKATPEFDVYSFGMVALEVACG 461
Y APEV + D++S G + + G
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 21/181 (11%)
Query: 300 LQKATHNFSKENLLGKGEREYLAEICTIGRLRHKNLVQLRGWCHEREHL-----LLVYEY 354
L+ A +N + E+L+E + H N+++L G C E +++ +
Sbjct: 63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 355 MANGSLDLFI-------GKGFLDWKTRYKILTGLASALLYL-------HEECDKPIVHHS 400
M G L ++ G + +T K + +A + YL + + +
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD 182
Query: 401 EYNARLGDLGLARLI-QNDACVTTMMAGTP-GYLAPEVSFSGKATPEFDVYSFGMVALEV 458
+ + D GL++ I D +A P ++A E T + DV++FG+ E+
Sbjct: 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
Query: 459 A 459
A
Sbjct: 243 A 243
>pdb|3ASP|A Chain A, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With A-Antigen
pdb|3ASP|B Chain B, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With A-Antigen
pdb|3ASQ|A Chain A, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With H-Antigen
pdb|3ASQ|B Chain B, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With H-Antigen
pdb|3ASR|A Chain A, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With Lewis-A
pdb|3ASR|B Chain B, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With Lewis-A
pdb|3ASS|A Chain A, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With Lewis-B
pdb|3ASS|B Chain B, Crystal Structure Of P Domain From Norovirus Funabashi258
Stain In The Complex With Lewis-B
Length = 326
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 15/104 (14%)
Query: 83 LAWPAMFTTTFTVRISKFPDATGSGDGMAFVMAQDNKPPPPNGYGSYLG------IMDKS 136
+ +P + +RISK P+ T SGD M V Q N G+ +LG + +
Sbjct: 106 VGFPDFGKCDWHMRISKTPNNTSSGDPMRSVSVQTNV----QGFVPHLGSIQFDEVFNHP 161
Query: 137 TQDGV-----VRQLAVELDTYMNEYMIPDGNHIGVDTTSMATPV 175
T D + + Q + T +N + IPD ++A PV
Sbjct: 162 TGDYIGTIEWISQPSTPPGTDINLWEIPDYGSSLSQAANLAPPV 205
>pdb|1FI4|A Chain A, The X-Ray Crystal Structure Of Mevalonate 5-Diphosphate
Decarboxylase At 2.3 Angstrom Resolution
Length = 416
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 157 MIPDGNHIGVDTTSMATPVAAKSLN-----STGIDLKSGRNITVKIDYDGAKTVPNAV 209
++P G+H V T S+ PV +L T ++L + +I+V + D +T+ +A
Sbjct: 14 LVPRGSHXTVYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAA 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,185,632
Number of Sequences: 62578
Number of extensions: 681634
Number of successful extensions: 2682
Number of sequences better than 100.0: 729
Number of HSP's better than 100.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 370
Number of HSP's that attempted gapping in prelim test: 1865
Number of HSP's gapped (non-prelim): 810
length of query: 579
length of database: 14,973,337
effective HSP length: 104
effective length of query: 475
effective length of database: 8,465,225
effective search space: 4020981875
effective search space used: 4020981875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)