Your job contains 1 sequence.
>047371
ESFHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGE
LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT
FTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVG
ISGILSEQLPRIINRYSEFLEDILVSEKDDWRCVSGTKFSPI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047371
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154739 - symbol:AT5G53920 species:3702 "Arabi... 612 1.0e-59 1
TIGR_CMR|VC_0293 - symbol:VC_0293 "ribosomal protein L11 ... 280 1.6e-24 1
UNIPROTKB|P0A8T1 - symbol:prmA "methyltransferase for 50S... 273 8.7e-24 1
TIGR_CMR|CPS_0540 - symbol:CPS_0540 "ribosomal protein L1... 260 2.1e-22 1
TIGR_CMR|SO_0395 - symbol:SO_0395 "ribosomal protein L11 ... 255 7.0e-22 1
TIGR_CMR|BA_4537 - symbol:BA_4537 "ribosomal protein L11 ... 216 9.5e-18 1
TIGR_CMR|GSU_0447 - symbol:GSU_0447 "ribosomal protein L1... 197 9.8e-16 1
TIGR_CMR|CHY_0417 - symbol:CHY_0417 "ribosomal protein L1... 194 2.6e-15 1
TIGR_CMR|GSU_3320 - symbol:GSU_3320 "ribosomal protein L1... 157 1.7e-11 1
TIGR_CMR|CJE_1260 - symbol:CJE_1260 "ribosomal protein L1... 133 2.1e-11 2
TIGR_CMR|SPO_3120 - symbol:SPO_3120 "ribosomal protein L1... 106 2.2e-09 2
UNIPROTKB|Q889R2 - symbol:PSPTO_0687 "Conserved domain pr... 112 0.00012 1
>TAIR|locus:2154739 [details] [associations]
symbol:AT5G53920 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006479 "protein
methylation" evidence=IEA] [GO:0008276 "protein methyltransferase
activity" evidence=IEA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008276 EMBL:AB007644 HSSP:Q84BQ9
eggNOG:COG2264 PANTHER:PTHR18895:SF3 TIGRFAMs:TIGR00406
HOGENOM:HOG000007390 UniGene:At.29528 UniGene:At.60677
IPI:IPI00544688 RefSeq:NP_200203.1 ProteinModelPortal:Q9FN34
SMR:Q9FN34 STRING:Q9FN34 PaxDb:Q9FN34 PRIDE:Q9FN34
EnsemblPlants:AT5G53920.1 GeneID:835475 KEGG:ath:AT5G53920
TAIR:At5g53920 InParanoid:Q9FN34 OMA:PEKDAVN PhylomeDB:Q9FN34
ProtClustDB:CLSN2686572 Genevestigator:Q9FN34 Uniprot:Q9FN34
Length = 371
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 129/216 (59%), Positives = 149/216 (68%)
Query: 3 FHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGGELF 62
F PVE+ + LWIVPEW++PP +A NIILNPG AFGTGEH TTK IKGGE F
Sbjct: 165 FQPVEIAERLWIVPEWTSPPVAEAVNIILNPGFAFGTGEHPTTKLCLLLLQSLIKGGEAF 224
Query: 63 LDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122
LDYGTGSGIL IAA+KFGAA VGVDIDP I SA NAALNNI +K++LHL P
Sbjct: 225 LDYGTGSGILAIAALKFGAASSVGVDIDPLAINSAIHNAALNNIPLEKLELHLAP----- 279
Query: 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182
+ S EI + E++DVVIANILLNP+ LADHI+S+ KPGA +GIS
Sbjct: 280 ---------IENSSSGREIP--LQKEQFDVVIANILLNPVMNLADHILSFVKPGATIGIS 328
Query: 183 GILSEQLPRIINRYSEFLEDILVSEKDDWRCVSGTK 218
GILSEQLP + RYS FLEDI V+ DW C+SGTK
Sbjct: 329 GILSEQLPNVRERYSPFLEDISVATIGDWVCMSGTK 364
>TIGR_CMR|VC_0293 [details] [associations]
symbol:VC_0293 "ribosomal protein L11 methyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008168
"methyltransferase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008276
eggNOG:COG2264 KO:K02687 ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 OMA:ASRYNAE PIR:D82341 RefSeq:NP_229948.1
ProteinModelPortal:Q9KV64 DNASU:2614963 GeneID:2614963
KEGG:vch:VC0293 PATRIC:20079633 Uniprot:Q9KV64
Length = 295
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 1 ESFHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGGE 60
++FHP++ + LWI P W PD QA N++L+PGLAFGTG H TT G+
Sbjct: 102 DNFHPMQFGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGK 161
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR 119
+D+G GSGIL IAAIK GAA +G+DIDPQ + ++ NAA N + +I+++L D+
Sbjct: 162 TVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALLASKDNAARNGV-EDQIEVYLPKDQ 219
Score = 134 (52.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 37/118 (31%), Positives = 57/118 (48%)
Query: 101 AALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN 160
AA+ K I + + P + N +GV + + + + E DVV+ANIL
Sbjct: 176 AAIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKDQPEGLVADVVVANILAG 235
Query: 161 PLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLEDILVSEKDDWRCVSGTK 218
PL +L+ I KPG + +SGIL Q + Y + LE ++EK +W +SG K
Sbjct: 236 PLRELSPIIKGLLKPGGQLAMSGILDTQAESVAEFYRDDLELDPIAEKSEWCRISGRK 293
>UNIPROTKB|P0A8T1 [details] [associations]
symbol:prmA "methyltransferase for 50S ribosomal subunit
protein L11" species:83333 "Escherichia coli K-12" [GO:0016279
"protein-lysine N-methyltransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018023
"peptidyl-lysine trimethylation" evidence=IDA;IMP] [GO:0018012
"N-terminal peptidyl-alanine trimethylation" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR004498
InterPro:IPR010456 Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016279 EMBL:M95784
EMBL:S67010 GO:GO:0018023 GO:GO:0018012 EMBL:M30953 eggNOG:COG2264
KO:K02687 ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 HOGENOM:HOG000007390 PIR:E65118
RefSeq:NP_417725.1 RefSeq:YP_491441.1 ProteinModelPortal:P0A8T1
SMR:P0A8T1 DIP:DIP-47862N IntAct:P0A8T1 MINT:MINT-1232840
PaxDb:P0A8T1 PRIDE:P0A8T1 EnsemblBacteria:EBESCT00000004290
EnsemblBacteria:EBESCT00000014672 GeneID:12932872 GeneID:947708
KEGG:ecj:Y75_p3177 KEGG:eco:b3259 PATRIC:32121948 EchoBASE:EB1460
EcoGene:EG11497 OMA:DNFHPIK BioCyc:EcoCyc:EG11497-MONOMER
BioCyc:ECOL316407:JW3227-MONOMER BioCyc:MetaCyc:EG11497-MONOMER
Genevestigator:P0A8T1 Uniprot:P0A8T1
Length = 293
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 52/119 (43%), Positives = 74/119 (62%)
Query: 1 ESFHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGGE 60
++FHP+ + LWI P W PD A N++L+PGLAFGTG H TT G+
Sbjct: 101 DNFHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK 160
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR 119
+D+G GSGIL IAA+K GAA +G+DIDPQ I+++ NA N + + ++L+L D+
Sbjct: 161 TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDR-LELYLPKDQ 218
Score = 133 (51.9 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 101 AALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN 160
AAL K I + + P + N +GV + L + + E + DVV+ANIL
Sbjct: 175 AALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAG 234
Query: 161 PLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSE-FLEDILVSEKDDWRCVSGTK 218
PL +LA I G ++G+SGIL+ Q + Y++ F D +V EK++W ++G K
Sbjct: 235 PLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVV-EKEEWCRITGRK 292
>TIGR_CMR|CPS_0540 [details] [associations]
symbol:CPS_0540 "ribosomal protein L11 methyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008276 eggNOG:COG2264 KO:K02687
ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3 TIGRFAMs:TIGR00406
RefSeq:YP_267298.1 ProteinModelPortal:Q489G6 STRING:Q489G6
GeneID:3523049 KEGG:cps:CPS_0540 PATRIC:21464421
HOGENOM:HOG000007390 OMA:ASRYNAE BioCyc:CPSY167879:GI48-635-MONOMER
Uniprot:Q489G6
Length = 293
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 48/119 (40%), Positives = 75/119 (63%)
Query: 1 ESFHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGGE 60
++FHP++ + LW+ P W PD +A N++L+PGLAFGTG H TT +
Sbjct: 102 DNFHPMKFGERLWVCPSWRDVPDPEAVNVMLDPGLAFGTGTHPTTALCLTWLDGLDLQDK 161
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR 119
+D+G GSGIL +AA+K GA +G+DIDPQ ++++ NA NN+ + ++L+L D+
Sbjct: 162 TVVDFGCGSGILSLAALKLGAKKVIGIDIDPQALQASLANAERNNVSDR-LELYLPKDQ 219
Score = 116 (45.9 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 101 AALNNIGPKK-IKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILL 159
AAL +G KK I + + P + N + V + L + + E + DVV+ANIL
Sbjct: 176 AALK-LGAKKVIGIDIDPQALQASLANAERNNVSDRLELYLPKDQPEFKA-DVVVANILA 233
Query: 160 NPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLEDILVSEKDDWRCVSGTK 218
PL +LA I+ Y ++ +SG+L EQ + Y ++ + VS +++W ++G +
Sbjct: 234 GPLRELAPVIIEYVGDKGLLALSGVLEEQAQTLQTIYGQWCDMEPVSVQEEWVRLNGQR 292
>TIGR_CMR|SO_0395 [details] [associations]
symbol:SO_0395 "ribosomal protein L11 methyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006412
"translation" evidence=ISS] [GO:0006464 "cellular protein
modification process" evidence=ISS] [GO:0008168 "methyltransferase
activity" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008276
eggNOG:COG2264 KO:K02687 ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 HOGENOM:HOG000007390 OMA:DNFHPIK
RefSeq:NP_716033.1 ProteinModelPortal:Q8EJR7 GeneID:1168272
KEGG:son:SO_0395 PATRIC:23520493 Uniprot:Q8EJR7
Length = 293
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 50/119 (42%), Positives = 71/119 (59%)
Query: 1 ESFHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGGE 60
+++HP++ K LWI P W PD A N+IL+PGLAFGTG H TT E
Sbjct: 101 DNYHPIQFGKRLWICPSWREVPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSNE 160
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR 119
+D+G GSGIL +AA+K GA G+DID Q I ++ NA N++ + ++L+L D+
Sbjct: 161 EVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAIDASKANAERNDVADQ-LELYLPEDQ 218
Score = 128 (50.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 101 AALNNIGPKKIKLHLVPDRTFTASM-NERVDGVVEYLSSHEIRGISETEEYDVVIANILL 159
AAL +G KK+ + + AS N + V + L + + DV++ANIL
Sbjct: 175 AALK-LGAKKVTGIDIDYQAIDASKANAERNDVADQLELYLPEDQPADLKADVLVANILA 233
Query: 160 NPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLEDILVSEKDDWRCVSGTK 218
PL +LA I K G + +SG+L EQ I + YS++ + + K+DW ++GT+
Sbjct: 234 GPLRELAPLIAERVKTGGKLALSGLLKEQAQEISDFYSQWFDMDEAAHKEDWSRLTGTR 292
>TIGR_CMR|BA_4537 [details] [associations]
symbol:BA_4537 "ribosomal protein L11 methyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006464 "cellular
protein modification process" evidence=ISS] [GO:0008168
"methyltransferase activity" evidence=ISS] InterPro:IPR004498
InterPro:IPR010456 Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008276 RefSeq:NP_846760.1
RefSeq:YP_021183.1 RefSeq:YP_030459.1 ProteinModelPortal:Q81LS4
DNASU:1088267 EnsemblBacteria:EBBACT00000012000
EnsemblBacteria:EBBACT00000014175 EnsemblBacteria:EBBACT00000020446
GeneID:1088267 GeneID:2819007 GeneID:2848691 KEGG:ban:BA_4537
KEGG:bar:GBAA_4537 KEGG:bat:BAS4211 eggNOG:COG2264
HOGENOM:HOG000007391 KO:K02687 OMA:EVNEEEW ProtClustDB:PRK00517
BioCyc:BANT260799:GJAJ-4267-MONOMER
BioCyc:BANT261594:GJ7F-4413-MONOMER PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 Uniprot:Q81LS4
Length = 312
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 43/104 (41%), Positives = 59/104 (56%)
Query: 3 FHPVEVTKGLWIVPEWS--TPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGGE 60
+HPV+++ IVP W TP + I L+PG+AFGTG H TT ++ G+
Sbjct: 118 YHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEKTVQPGD 177
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104
+D GTGSG+L IAA K GA+ D+DP ++SA N LN
Sbjct: 178 TIIDVGTGSGVLSIAAAKLGASSVQAYDLDPVAVESAEMNVRLN 221
>TIGR_CMR|GSU_0447 [details] [associations]
symbol:GSU_0447 "ribosomal protein L11 methyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006464 "cellular
protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008276 eggNOG:COG2264
HOGENOM:HOG000007391 KO:K02687 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 RefSeq:NP_951506.1 ProteinModelPortal:Q74G05
GeneID:2686328 KEGG:gsu:GSU0447 PATRIC:22023640 OMA:ITIPIAR
ProtClustDB:CLSK827836 BioCyc:GSUL243231:GH27-438-MONOMER
Uniprot:Q74G05
Length = 299
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 47/122 (38%), Positives = 65/122 (53%)
Query: 1 ESFHPVEVTKGLWIVPEWST-PPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKGG 59
+ F P + + L I P W P+ I L+PG+AFGTG H TT+ +
Sbjct: 107 QHFVPTRIGRHLVIKPTWEPFAPEPGDQVIELDPGMAFGTGTHPTTRLCLEALETLGRPD 166
Query: 60 ELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIK--LHLVP 117
+ LD GTGSGIL IAA++ GA +G DIDP + A +N ALN + + + L L+P
Sbjct: 167 RV-LDVGTGSGILAIAAVRLGARQVIGTDIDPDAVIVAGENCALNGVEVELVTTPLALIP 225
Query: 118 DR 119
R
Sbjct: 226 GR 227
>TIGR_CMR|CHY_0417 [details] [associations]
symbol:CHY_0417 "ribosomal protein L11 methyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006464 "cellular protein modification process" evidence=ISS]
[GO:0008757 "S-adenosylmethionine-dependent methyltransferase
activity" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008276 HSSP:O60678
eggNOG:COG2264 HOGENOM:HOG000007391 KO:K02687 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 RefSeq:YP_359278.1 ProteinModelPortal:Q3AF06
STRING:Q3AF06 GeneID:3727819 KEGG:chy:CHY_0417 PATRIC:21273995
OMA:EMRIRIE BioCyc:CHYD246194:GJCN-418-MONOMER Uniprot:Q3AF06
Length = 305
Score = 194 (73.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 3 FHPVEVTKGLWIVPEWST-PPDVQATNII-LNPGLAFGTGEHATTKXXXXXXXXXIKGGE 60
F PVEV + L I P W P + II ++PG+AFGTG H TT + G+
Sbjct: 112 FKPVEVGEFL-IKPTWEKLPSGKEDKKIIEIDPGMAFGTGTHVTTALVLEALPKYVSPGK 170
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120
+ +D GTGSGIL IA+ GA +DIDP +K A +N ++N + KI V +
Sbjct: 171 VVVDVGTGSGILAIASALLGAEKIYALDIDPVAVKVARENISINRL-EDKIT---VIEND 226
Query: 121 FTASMNERVDGVVEYLSSHEIRGIS 145
N+ VD ++ + + I+ ++
Sbjct: 227 LLHGFNQTVDVIIANIIAAVIKELA 251
>TIGR_CMR|GSU_3320 [details] [associations]
symbol:GSU_3320 "ribosomal protein L11 methyltransferase,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008168
"methyltransferase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 GO:GO:0005737 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008276 PANTHER:PTHR18895:SF3 RefSeq:NP_954360.1
ProteinModelPortal:Q747E7 GeneID:2686457 KEGG:gsu:GSU3320
PATRIC:22029491 HOGENOM:HOG000003422 OMA:ANIYADI
ProtClustDB:CLSK924677 BioCyc:GSUL243231:GH27-3343-MONOMER
Uniprot:Q747E7
Length = 198
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/109 (40%), Positives = 56/109 (51%)
Query: 3 FHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKXXXXXXXXXIKG--GE 60
F P V G IVPE + P + +I+ AFG+GEH TT I G G
Sbjct: 6 FTPFTVG-GFIIVPEDAPLPLGEHIPLIMGKKGAFGSGEHETT-ASCLEELERIPGLTGM 63
Query: 61 LFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPK 109
LD G+G+GIL IAA++ GAA V VDIDP+ S N LN + +
Sbjct: 64 RGLDLGSGTGILAIAAVRLGAASVVAVDIDPKAAASCAANVRLNGVADR 112
>TIGR_CMR|CJE_1260 [details] [associations]
symbol:CJE_1260 "ribosomal protein L11 methyltransferase,
putative" species:195099 "Campylobacter jejuni RM1221" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0008276 HSSP:Q84BQ9 eggNOG:COG2264
HOGENOM:HOG000007391 KO:K02687 ProtClustDB:PRK00517
PANTHER:PTHR18895:SF3 RefSeq:YP_179248.1 ProteinModelPortal:Q5HTY7
STRING:Q5HTY7 GeneID:3231767 KEGG:cjr:CJE1260 PATRIC:20044316
OMA:FSWALEI BioCyc:CJEJ195099:GJC0-1286-MONOMER Uniprot:Q5HTY7
Length = 281
Score = 133 (51.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/79 (41%), Positives = 41/79 (51%)
Query: 28 NIILNPGLAFGTGEHATTKXXXXXXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMFVGV 87
NI +NP LAFG+G H +T K LD G GSGILGI KFG + +
Sbjct: 116 NIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGILGIIMAKFGCNVEI-C 174
Query: 88 DIDPQVIKSAHQNAALNNI 106
D D I S+ +NA LN +
Sbjct: 175 DTDELAIDSSLENARLNGV 193
Score = 73 (30.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 16/60 (26%), Positives = 37/60 (61%)
Query: 150 YDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYS--EFLEDILVSE 207
Y++++ANI+ + + L I ++ + A++ +SGIL + RI ++ E +++I ++E
Sbjct: 210 YNLIVANIIADVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEIQINE 269
>TIGR_CMR|SPO_3120 [details] [associations]
symbol:SPO_3120 "ribosomal protein L11 methyltransferase,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008276 HOGENOM:HOG000007391
KO:K02687 PANTHER:PTHR18895:SF3 RefSeq:YP_168323.1
ProteinModelPortal:Q5LNT3 GeneID:3195458 KEGG:sil:SPO3120
PATRIC:23379685 OMA:YGSHDAD ProtClustDB:CLSK934068 Uniprot:Q5LNT3
Length = 292
Score = 106 (42.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 123 ASMNERVDGVVEYLSSHEIRGISETE-----EYDVVIANILLNPLPQLADHIVSYAKPGA 177
A N + +G+ ++ E G + YD++ ANIL PL LA + S+ +PG
Sbjct: 187 AEANLKANGMAGAVTCLEAAGFDHPDLAAQAPYDLIFANILKGPLVALAPDVASHLRPGG 246
Query: 178 VVGISGILSEQLPRIINRYSE 198
+SGIL+EQ +I Y++
Sbjct: 247 YAILSGILNEQADDVIAVYAQ 267
Score = 90 (36.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 29 IILNPGLAFGTGEHATTKXXXXXXXXXIKGG---ELFLDYGTGSGILGIAAIKFGAAMFV 85
+++ +AFGTG H TT I+ G D G G+ +L +AA + F+
Sbjct: 116 LLIEASMAFGTGHHGTTLGCLRALDGLIELGFSAAKVADIGCGTAVLAMAAARVWQGDFL 175
Query: 86 GVDIDPQVIKSAHQNAALNNI 106
DID ++ A N N +
Sbjct: 176 ASDIDAVAVEVAEANLKANGM 196
>UNIPROTKB|Q889R2 [details] [associations]
symbol:PSPTO_0687 "Conserved domain protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR010456 Pfam:PF06325
GO:GO:0005737 EMBL:AE016853 GenomeReviews:AE016853_GR GO:GO:0008276
HSSP:Q84BQ9 eggNOG:COG3897 HOGENOM:HOG000226047 RefSeq:NP_790534.1
ProteinModelPortal:Q889R2 GeneID:1182307 KEGG:pst:PSPTO_0687
PATRIC:19992555 OMA:PPYWSFC ProtClustDB:CLSK912612
BioCyc:PSYR223283:GJIX-694-MONOMER Uniprot:Q889R2
Length = 217
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 59 GELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNI 106
G+ LD+G GSG+ GIAA++ GA V D+DP + + NA LN +
Sbjct: 82 GKRVLDFGAGSGVAGIAALRAGALEVVACDLDPLALAACRANAELNQV 129
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.138 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 213 0.00084 112 3 11 22 0.40 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 598 (64 KB)
Total size of DFA: 171 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.84u 0.09s 17.93t Elapsed: 00:00:00
Total cpu time: 17.84u 0.09s 17.93t Elapsed: 00:00:00
Start: Sat May 11 05:53:54 2013 End: Sat May 11 05:53:54 2013