Query 047371
Match_columns 222
No_of_seqs 138 out of 1510
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 18:23:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047371.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047371hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3grz_A L11 mtase, ribosomal pr 100.0 8.7E-27 3E-31 185.9 19.1 194 1-220 1-197 (205)
2 2nxc_A L11 mtase, ribosomal pr 100.0 3E-27 1E-31 195.6 16.9 188 2-218 66-254 (254)
3 4gek_A TRNA (CMO5U34)-methyltr 99.8 6.4E-18 2.2E-22 140.2 15.9 118 43-185 55-180 (261)
4 3dmg_A Probable ribosomal RNA 99.7 1.2E-16 4.3E-21 139.2 18.2 163 28-219 199-373 (381)
5 1dus_A MJ0882; hypothetical pr 99.7 1.4E-16 4.7E-21 124.4 16.6 138 57-218 51-193 (194)
6 3p9n_A Possible methyltransfer 99.7 9.9E-17 3.4E-21 126.0 14.9 131 27-184 13-154 (189)
7 3e05_A Precorrin-6Y C5,15-meth 99.7 5.1E-16 1.8E-20 123.3 16.7 120 56-199 38-158 (204)
8 3evz_A Methyltransferase; NYSG 99.7 3.5E-16 1.2E-20 126.3 15.3 124 52-199 49-196 (230)
9 3njr_A Precorrin-6Y methylase; 99.7 8.2E-16 2.8E-20 122.7 17.0 118 56-199 53-170 (204)
10 3dlc_A Putative S-adenosyl-L-m 99.7 4.3E-16 1.5E-20 124.0 15.0 101 60-183 45-148 (219)
11 3mti_A RRNA methylase; SAM-dep 99.7 3.2E-16 1.1E-20 122.4 13.9 118 44-185 8-137 (185)
12 2b3t_A Protein methyltransfera 99.7 2.3E-15 8E-20 125.2 19.3 150 27-205 80-260 (276)
13 1nv8_A HEMK protein; class I a 99.7 1.1E-15 3.8E-20 128.1 17.2 144 27-199 93-264 (284)
14 2frn_A Hypothetical protein PH 99.7 8E-16 2.7E-20 128.5 15.8 146 26-199 96-247 (278)
15 2igt_A SAM dependent methyltra 99.7 8.9E-16 3.1E-20 131.5 16.3 156 24-198 116-289 (332)
16 3lpm_A Putative methyltransfer 99.7 1E-15 3.5E-20 126.3 15.0 120 58-199 49-191 (259)
17 3dh0_A SAM dependent methyltra 99.7 1.7E-15 5.8E-20 121.1 15.7 140 56-219 35-193 (219)
18 3eey_A Putative rRNA methylase 99.7 1.4E-15 4.6E-20 120.0 14.2 117 46-184 10-140 (197)
19 4dmg_A Putative uncharacterize 99.7 1.8E-15 6.2E-20 132.3 15.9 151 24-199 180-343 (393)
20 3ocj_A Putative exported prote 99.7 1.3E-15 4.5E-20 128.4 14.3 146 50-219 110-304 (305)
21 3kkz_A Uncharacterized protein 99.7 7.7E-16 2.6E-20 127.1 12.4 106 56-184 44-151 (267)
22 2ift_A Putative methylase HI07 99.7 1.4E-15 4.8E-20 121.0 13.3 110 58-187 53-167 (201)
23 2esr_A Methyltransferase; stru 99.7 4E-16 1.4E-20 121.0 9.9 110 57-188 30-143 (177)
24 3k6r_A Putative transferase PH 99.7 1E-15 3.5E-20 127.8 12.6 134 23-184 93-226 (278)
25 4hg2_A Methyltransferase type 99.7 7.1E-16 2.4E-20 127.6 11.4 109 45-184 26-136 (257)
26 3hem_A Cyclopropane-fatty-acyl 99.6 3.5E-15 1.2E-19 125.5 15.8 104 56-186 70-186 (302)
27 3a27_A TYW2, uncharacterized p 99.6 2.2E-15 7.5E-20 125.5 14.4 145 25-198 89-239 (272)
28 3f4k_A Putative methyltransfer 99.6 2.3E-15 7.9E-20 123.2 14.3 105 56-183 44-150 (257)
29 1l3i_A Precorrin-6Y methyltran 99.6 3.2E-15 1.1E-19 116.3 14.4 133 43-199 16-150 (192)
30 3c0k_A UPF0064 protein YCCW; P 99.6 2.7E-15 9.2E-20 131.2 15.4 142 25-186 188-342 (396)
31 4dzr_A Protein-(glutamine-N5) 99.6 2.4E-16 8.3E-21 125.1 8.0 156 43-219 12-205 (215)
32 4dcm_A Ribosomal RNA large sub 99.6 5.3E-15 1.8E-19 128.6 16.9 163 27-217 193-366 (375)
33 2as0_A Hypothetical protein PH 99.6 2.7E-15 9.1E-20 131.2 15.0 152 25-196 185-349 (396)
34 3hm2_A Precorrin-6Y C5,15-meth 99.6 3.4E-15 1.2E-19 115.4 14.0 120 56-199 23-143 (178)
35 2b78_A Hypothetical protein SM 99.6 4E-15 1.4E-19 129.8 16.0 156 25-198 179-347 (385)
36 1yzh_A TRNA (guanine-N(7)-)-me 99.6 6.7E-15 2.3E-19 117.8 15.7 121 57-199 40-172 (214)
37 1ws6_A Methyltransferase; stru 99.6 1.6E-15 5.4E-20 116.4 11.4 110 58-189 41-153 (171)
38 2yxd_A Probable cobalt-precorr 99.6 6.8E-15 2.3E-19 113.8 15.0 129 42-199 17-147 (183)
39 1vl5_A Unknown conserved prote 99.6 3.3E-15 1.1E-19 122.7 13.9 103 56-183 35-140 (260)
40 2fhp_A Methylase, putative; al 99.6 1.8E-15 6.3E-20 117.8 11.7 127 41-186 24-157 (187)
41 2fpo_A Methylase YHHF; structu 99.6 2.2E-15 7.6E-20 119.9 12.3 132 27-185 24-162 (202)
42 1pjz_A Thiopurine S-methyltran 99.6 1.5E-15 5.2E-20 121.0 11.2 111 48-181 11-138 (203)
43 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2.5E-15 8.5E-20 121.3 12.6 122 57-199 33-166 (218)
44 3kr9_A SAM-dependent methyltra 99.6 5.5E-15 1.9E-19 119.7 13.8 144 49-217 6-155 (225)
45 3lec_A NADB-rossmann superfami 99.6 5.2E-15 1.8E-19 120.1 13.7 144 48-216 11-160 (230)
46 1nkv_A Hypothetical protein YJ 99.6 6.4E-15 2.2E-19 120.4 14.3 104 56-183 34-140 (256)
47 2ozv_A Hypothetical protein AT 99.6 4.4E-15 1.5E-19 122.8 13.3 129 56-201 34-187 (260)
48 1xxl_A YCGJ protein; structura 99.6 1.1E-14 3.9E-19 118.4 15.3 104 56-184 19-125 (239)
49 2pjd_A Ribosomal RNA small sub 99.6 4.6E-15 1.6E-19 127.4 13.4 132 58-219 196-337 (343)
50 1xdz_A Methyltransferase GIDB; 99.6 4.7E-15 1.6E-19 120.9 12.8 141 57-219 69-219 (240)
51 3bus_A REBM, methyltransferase 99.6 9.3E-15 3.2E-19 120.7 14.5 106 56-184 59-167 (273)
52 1wxx_A TT1595, hypothetical pr 99.6 4.4E-15 1.5E-19 129.3 13.1 138 25-185 178-327 (382)
53 4htf_A S-adenosylmethionine-de 99.6 1.8E-14 6.1E-19 120.0 16.1 111 50-183 60-173 (285)
54 3v97_A Ribosomal RNA large sub 99.6 8.8E-15 3E-19 136.5 15.7 140 24-185 506-659 (703)
55 2pxx_A Uncharacterized protein 99.6 6E-15 2E-19 117.1 12.6 115 46-186 30-162 (215)
56 2ex4_A Adrenal gland protein A 99.6 5.9E-15 2E-19 120.0 12.6 128 58-209 79-226 (241)
57 3e23_A Uncharacterized protein 99.6 1.1E-14 3.6E-19 116.0 13.8 135 54-220 39-203 (211)
58 3fpf_A Mtnas, putative unchara 99.6 6.7E-15 2.3E-19 123.6 13.1 102 56-183 120-222 (298)
59 1uwv_A 23S rRNA (uracil-5-)-me 99.6 1.5E-14 5.2E-19 127.9 16.0 157 26-204 253-410 (433)
60 3g5l_A Putative S-adenosylmeth 99.6 1.6E-14 5.5E-19 118.1 14.5 98 58-182 44-144 (253)
61 3sm3_A SAM-dependent methyltra 99.6 1.2E-14 4E-19 116.9 13.4 111 51-184 23-142 (235)
62 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.3E-14 4.3E-19 116.5 13.4 121 57-199 37-169 (213)
63 1ve3_A Hypothetical protein PH 99.6 1.7E-14 5.8E-19 115.6 14.2 113 45-183 25-142 (227)
64 4fsd_A Arsenic methyltransfera 99.6 1E-14 3.5E-19 127.0 13.8 113 56-184 81-204 (383)
65 2gb4_A Thiopurine S-methyltran 99.6 1.7E-14 5.9E-19 118.9 14.3 134 48-203 56-222 (252)
66 3ntv_A MW1564 protein; rossman 99.6 4.1E-14 1.4E-18 114.8 16.4 107 57-184 70-177 (232)
67 3cgg_A SAM-dependent methyltra 99.6 4.3E-14 1.5E-18 110.2 15.9 125 50-204 38-171 (195)
68 3hnr_A Probable methyltransfer 99.6 2.6E-14 9E-19 114.2 15.0 98 57-184 44-146 (220)
69 3jwh_A HEN1; methyltransferase 99.6 2.4E-14 8.3E-19 114.5 14.6 104 57-182 28-140 (217)
70 2xvm_A Tellurite resistance pr 99.6 2.4E-14 8.1E-19 112.4 14.3 121 57-204 31-169 (199)
71 3tfw_A Putative O-methyltransf 99.6 4.8E-14 1.7E-18 115.6 16.6 110 56-185 61-172 (248)
72 3gnl_A Uncharacterized protein 99.6 1.6E-14 5.3E-19 118.3 13.5 143 48-215 11-159 (244)
73 2yx1_A Hypothetical protein MJ 99.6 1.4E-14 4.7E-19 124.2 13.8 142 25-199 165-306 (336)
74 2o57_A Putative sarcosine dime 99.6 1.6E-14 5.4E-19 120.9 13.8 105 57-184 81-188 (297)
75 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.5E-14 5E-19 118.1 13.2 129 57-211 92-241 (254)
76 3q87_B N6 adenine specific DNA 99.6 1.7E-14 6E-19 111.7 12.8 126 43-205 8-146 (170)
77 3tr6_A O-methyltransferase; ce 99.6 2.7E-14 9.4E-19 114.7 14.3 112 57-185 63-176 (225)
78 3ujc_A Phosphoethanolamine N-m 99.6 1.3E-14 4.3E-19 119.0 12.5 103 56-184 53-160 (266)
79 3l8d_A Methyltransferase; stru 99.6 3.2E-14 1.1E-18 115.2 14.7 110 46-183 41-153 (242)
80 3jwg_A HEN1, methyltransferase 99.6 2.8E-14 9.7E-19 114.2 14.2 104 57-182 28-140 (219)
81 3vc1_A Geranyl diphosphate 2-C 99.6 1.3E-14 4.5E-19 122.7 12.8 104 57-183 116-221 (312)
82 3lcc_A Putative methyl chlorid 99.6 2.2E-14 7.6E-19 116.1 13.4 134 47-205 55-204 (235)
83 2a14_A Indolethylamine N-methy 99.6 8.9E-15 3E-19 120.9 11.2 131 57-205 54-235 (263)
84 3g5t_A Trans-aconitate 3-methy 99.6 2.9E-14 1E-18 119.6 14.3 119 46-181 23-147 (299)
85 1kpg_A CFA synthase;, cyclopro 99.6 2.9E-14 9.8E-19 118.8 14.1 103 56-185 62-170 (287)
86 3duw_A OMT, O-methyltransferas 99.6 5.1E-14 1.8E-18 113.0 14.9 111 57-185 57-169 (223)
87 3i9f_A Putative type 11 methyl 99.6 1.8E-14 6.2E-19 110.8 11.3 121 56-210 15-150 (170)
88 1jsx_A Glucose-inhibited divis 99.6 2.8E-14 9.7E-19 113.1 12.6 117 58-202 65-182 (207)
89 3h2b_A SAM-dependent methyltra 99.6 6E-14 2.1E-18 110.8 14.4 119 58-206 41-180 (203)
90 1zx0_A Guanidinoacetate N-meth 99.6 1.4E-14 4.8E-19 117.6 10.8 105 56-183 58-170 (236)
91 3mb5_A SAM-dependent methyltra 99.6 4.9E-14 1.7E-18 115.4 14.1 118 56-199 91-210 (255)
92 3dtn_A Putative methyltransfer 99.6 7.8E-14 2.7E-18 112.6 15.1 105 57-188 43-153 (234)
93 3u81_A Catechol O-methyltransf 99.6 6.1E-14 2.1E-18 112.8 14.3 125 57-199 57-186 (221)
94 3lbf_A Protein-L-isoaspartate 99.6 3.1E-14 1.1E-18 113.2 12.4 100 56-183 75-174 (210)
95 3pfg_A N-methyltransferase; N, 99.6 9.6E-14 3.3E-18 114.1 15.7 107 45-182 37-150 (263)
96 3ofk_A Nodulation protein S; N 99.6 2.6E-14 9E-19 114.0 11.7 109 47-183 38-154 (216)
97 3tma_A Methyltransferase; thum 99.6 3.7E-14 1.3E-18 122.2 13.4 105 56-184 201-318 (354)
98 1y8c_A S-adenosylmethionine-de 99.6 6.4E-14 2.2E-18 113.3 14.1 109 47-182 26-141 (246)
99 3adn_A Spermidine synthase; am 99.6 8.2E-14 2.8E-18 117.3 15.2 171 27-218 51-244 (294)
100 3mgg_A Methyltransferase; NYSG 99.6 4.6E-14 1.6E-18 116.8 13.5 113 47-183 24-142 (276)
101 3r3h_A O-methyltransferase, SA 99.6 2.2E-14 7.4E-19 117.5 11.2 111 57-184 59-171 (242)
102 1iy9_A Spermidine synthase; ro 99.6 6.6E-14 2.2E-18 116.8 14.3 141 57-218 74-235 (275)
103 1ixk_A Methyltransferase; open 99.6 3.9E-14 1.3E-18 120.4 13.0 124 36-183 94-246 (315)
104 2jjq_A Uncharacterized RNA met 99.6 6.7E-14 2.3E-18 123.5 15.0 138 26-194 260-398 (425)
105 1nt2_A Fibrillarin-like PRE-rR 99.6 1.7E-13 5.9E-18 109.8 15.8 104 56-182 55-160 (210)
106 1inl_A Spermidine synthase; be 99.5 5.7E-14 1.9E-18 118.4 13.5 141 57-218 89-251 (296)
107 3g89_A Ribosomal RNA small sub 99.5 4E-14 1.4E-18 116.5 12.3 104 57-182 79-183 (249)
108 2fk8_A Methoxy mycolic acid sy 99.5 7.3E-14 2.5E-18 118.1 14.2 104 56-186 88-197 (318)
109 3m70_A Tellurite resistance pr 99.5 9.2E-14 3.1E-18 115.7 14.6 98 58-182 120-222 (286)
110 1ri5_A MRNA capping enzyme; me 99.5 8.2E-14 2.8E-18 116.1 14.3 108 54-183 60-174 (298)
111 3ajd_A Putative methyltransfer 99.5 2.3E-14 7.7E-19 119.4 10.8 124 56-199 81-230 (274)
112 3fzg_A 16S rRNA methylase; met 99.5 7.9E-14 2.7E-18 109.7 13.1 138 56-219 47-198 (200)
113 3dr5_A Putative O-methyltransf 99.5 3.7E-14 1.3E-18 114.6 11.4 122 43-184 39-164 (221)
114 3orh_A Guanidinoacetate N-meth 99.5 2.6E-14 9E-19 116.5 10.6 104 56-182 58-169 (236)
115 2vdw_A Vaccinia virus capping 99.5 6.8E-14 2.3E-18 118.2 13.3 113 58-184 48-170 (302)
116 2b25_A Hypothetical protein; s 99.5 9.6E-14 3.3E-18 118.6 14.3 143 56-220 103-261 (336)
117 3ou2_A SAM-dependent methyltra 99.5 2.4E-13 8.1E-18 108.1 15.6 99 56-184 44-147 (218)
118 3q7e_A Protein arginine N-meth 99.5 9.3E-14 3.2E-18 119.6 13.9 102 56-181 64-171 (349)
119 1fbn_A MJ fibrillarin homologu 99.5 2.1E-13 7.2E-18 110.3 15.2 140 56-219 72-228 (230)
120 4df3_A Fibrillarin-like rRNA/T 99.5 2E-13 6.7E-18 111.1 15.0 104 56-182 75-181 (233)
121 2yqz_A Hypothetical protein TT 99.5 6.4E-14 2.2E-18 114.7 12.2 101 56-182 37-140 (263)
122 3ckk_A TRNA (guanine-N(7)-)-me 99.5 7.7E-14 2.6E-18 113.8 12.4 122 56-199 44-184 (235)
123 2p8j_A S-adenosylmethionine-de 99.5 7.3E-14 2.5E-18 110.6 12.0 104 56-184 21-129 (209)
124 1yb2_A Hypothetical protein TA 99.5 6E-14 2E-18 116.7 11.9 122 56-204 108-233 (275)
125 2gs9_A Hypothetical protein TT 99.5 8.1E-14 2.8E-18 110.7 12.2 109 47-187 25-136 (211)
126 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.3E-13 4.4E-18 112.8 13.7 123 56-204 94-220 (258)
127 3uwp_A Histone-lysine N-methyl 99.5 1.1E-13 3.9E-18 120.6 13.3 117 48-184 162-289 (438)
128 2p7i_A Hypothetical protein; p 99.5 1.1E-13 3.9E-18 111.9 12.6 107 47-184 32-142 (250)
129 2gpy_A O-methyltransferase; st 99.5 1.6E-13 5.4E-18 111.1 13.3 109 56-184 52-161 (233)
130 3ccf_A Cyclopropane-fatty-acyl 99.5 2.2E-13 7.5E-18 113.1 14.2 100 56-186 55-157 (279)
131 2yvl_A TRMI protein, hypotheti 99.5 2.4E-13 8.3E-18 110.5 14.2 118 56-199 89-206 (248)
132 2kw5_A SLR1183 protein; struct 99.5 2.2E-13 7.6E-18 107.5 13.5 101 56-183 28-131 (202)
133 3g07_A 7SK snRNA methylphospha 99.5 7.7E-14 2.6E-18 117.1 11.4 108 58-182 46-219 (292)
134 1mjf_A Spermidine synthase; sp 99.5 1.3E-13 4.5E-18 115.2 12.6 141 56-219 73-239 (281)
135 1i9g_A Hypothetical protein RV 99.5 1.8E-13 6.2E-18 113.5 13.3 118 56-198 97-218 (280)
136 3bgv_A MRNA CAP guanine-N7 met 99.5 1.7E-13 5.7E-18 115.8 13.2 113 57-186 33-158 (313)
137 2fyt_A Protein arginine N-meth 99.5 2.5E-13 8.5E-18 116.6 14.4 101 56-180 62-168 (340)
138 2p35_A Trans-aconitate 2-methy 99.5 3E-13 1E-17 110.6 14.2 109 46-184 20-133 (259)
139 1o54_A SAM-dependent O-methylt 99.5 2.1E-13 7E-18 113.4 13.4 123 56-204 110-235 (277)
140 3dli_A Methyltransferase; PSI- 99.5 1.6E-13 5.5E-18 111.4 12.4 99 56-185 39-142 (240)
141 3iv6_A Putative Zn-dependent a 99.5 1.6E-13 5.5E-18 113.6 12.6 113 47-187 33-152 (261)
142 1uir_A Polyamine aminopropyltr 99.5 2.4E-13 8.3E-18 115.4 13.7 143 56-219 75-242 (314)
143 3thr_A Glycine N-methyltransfe 99.5 9.2E-14 3.2E-18 115.9 11.0 107 57-183 56-175 (293)
144 3c3p_A Methyltransferase; NP_9 99.5 3.6E-13 1.2E-17 107.3 13.9 105 57-184 55-161 (210)
145 3bkw_A MLL3908 protein, S-aden 99.5 1.5E-13 5E-18 111.3 11.6 99 58-183 43-144 (243)
146 3bwc_A Spermidine synthase; SA 99.5 3.3E-13 1.1E-17 114.1 14.3 144 56-219 93-258 (304)
147 3gu3_A Methyltransferase; alph 99.5 3.3E-13 1.1E-17 112.6 14.1 103 56-184 20-127 (284)
148 3d2l_A SAM-dependent methyltra 99.5 2.2E-13 7.5E-18 110.2 12.7 107 48-182 23-136 (243)
149 3m33_A Uncharacterized protein 99.5 1.3E-13 4.3E-18 111.3 11.0 121 44-198 34-156 (226)
150 2i62_A Nicotinamide N-methyltr 99.5 1.5E-13 5.2E-18 112.6 11.6 132 57-206 55-237 (265)
151 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3.2E-13 1.1E-17 110.4 13.4 109 56-185 47-175 (246)
152 2pt6_A Spermidine synthase; tr 99.5 3.6E-13 1.2E-17 114.7 14.1 142 56-218 114-276 (321)
153 3r0q_C Probable protein argini 99.5 2.5E-13 8.5E-18 118.1 13.3 101 56-181 61-167 (376)
154 1ej0_A FTSJ; methyltransferase 99.5 2E-13 6.7E-18 104.5 11.1 123 56-205 20-158 (180)
155 3ggd_A SAM-dependent methyltra 99.5 2.1E-13 7.1E-18 110.9 11.9 109 56-187 54-167 (245)
156 1g6q_1 HnRNP arginine N-methyl 99.5 4.2E-13 1.4E-17 114.5 14.2 102 56-181 36-143 (328)
157 3gjy_A Spermidine synthase; AP 99.5 8.7E-13 3E-17 111.9 15.8 159 26-206 45-226 (317)
158 1o9g_A RRNA methyltransferase; 99.5 7.3E-14 2.5E-18 114.4 8.9 109 58-184 51-215 (250)
159 3id6_C Fibrillarin-like rRNA/T 99.5 8.7E-13 3E-17 107.4 15.1 130 56-208 74-216 (232)
160 4hc4_A Protein arginine N-meth 99.5 3.2E-13 1.1E-17 117.2 13.2 99 58-181 83-187 (376)
161 3dou_A Ribosomal RNA large sub 99.5 4.1E-13 1.4E-17 106.1 12.8 133 48-205 13-161 (191)
162 2yxe_A Protein-L-isoaspartate 99.5 2.7E-13 9.2E-18 108.1 11.7 102 56-184 75-178 (215)
163 1vbf_A 231AA long hypothetical 99.5 3E-13 1E-17 109.0 12.0 99 56-184 68-166 (231)
164 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.5E-13 1.2E-17 109.1 12.4 106 56-184 75-183 (233)
165 1wzn_A SAM-dependent methyltra 99.5 7E-13 2.4E-17 108.1 14.2 99 57-182 40-144 (252)
166 3htx_A HEN1; HEN1, small RNA m 99.5 1.7E-13 5.8E-18 127.8 11.7 124 35-183 696-834 (950)
167 3bzb_A Uncharacterized protein 99.5 9.5E-13 3.2E-17 109.9 15.2 155 43-213 62-242 (281)
168 1g8a_A Fibrillarin-like PRE-rR 99.5 9.1E-13 3.1E-17 106.0 14.5 104 56-182 71-177 (227)
169 1sui_A Caffeoyl-COA O-methyltr 99.5 3.8E-13 1.3E-17 110.4 12.5 111 57-183 78-190 (247)
170 3ege_A Putative methyltransfer 99.5 2.1E-13 7.3E-18 112.3 10.8 95 57-183 33-130 (261)
171 3bkx_A SAM-dependent methyltra 99.5 7.3E-13 2.5E-17 109.3 14.0 113 49-184 33-160 (275)
172 1wy7_A Hypothetical protein PH 99.5 1.9E-12 6.6E-17 102.5 15.9 111 57-198 48-164 (207)
173 3p2e_A 16S rRNA methylase; met 99.5 1.3E-13 4.4E-18 111.7 9.2 108 51-181 17-137 (225)
174 2yxl_A PH0851 protein, 450AA l 99.5 6.2E-13 2.1E-17 118.2 14.3 142 36-199 235-408 (450)
175 1dl5_A Protein-L-isoaspartate 99.5 3.6E-13 1.2E-17 114.3 12.2 102 56-184 73-176 (317)
176 3tm4_A TRNA (guanine N2-)-meth 99.5 7.8E-13 2.7E-17 114.8 14.5 115 56-198 215-341 (373)
177 3gdh_A Trimethylguanosine synt 99.5 4.5E-14 1.5E-18 114.7 6.3 100 58-182 78-180 (241)
178 1jg1_A PIMT;, protein-L-isoasp 99.5 5.1E-13 1.7E-17 108.3 12.5 102 56-184 89-190 (235)
179 3m4x_A NOL1/NOP2/SUN family pr 99.5 1.6E-13 5.5E-18 121.9 10.2 121 56-199 103-253 (456)
180 3g2m_A PCZA361.24; SAM-depende 99.5 3.4E-13 1.1E-17 113.1 11.7 114 47-184 71-191 (299)
181 2plw_A Ribosomal RNA methyltra 99.5 8.8E-13 3E-17 103.9 13.2 143 48-204 10-175 (201)
182 2pbf_A Protein-L-isoaspartate 99.5 3.4E-13 1.2E-17 108.5 11.0 116 47-183 69-193 (227)
183 2y1w_A Histone-arginine methyl 99.5 8.5E-13 2.9E-17 113.5 14.1 100 57-181 49-153 (348)
184 3c3y_A Pfomt, O-methyltransfer 99.5 7.5E-13 2.6E-17 107.8 12.9 111 57-183 69-181 (237)
185 2hnk_A SAM-dependent O-methylt 99.5 6.2E-13 2.1E-17 108.1 12.3 121 56-184 58-182 (239)
186 1xj5_A Spermidine synthase 1; 99.5 9.3E-13 3.2E-17 112.8 13.9 143 56-218 118-282 (334)
187 3bt7_A TRNA (uracil-5-)-methyl 99.5 4.5E-13 1.5E-17 116.1 12.0 156 27-196 182-340 (369)
188 3bxo_A N,N-dimethyltransferase 99.5 8.3E-13 2.8E-17 106.5 12.6 108 46-184 28-142 (239)
189 2frx_A Hypothetical protein YE 99.5 1.2E-12 4.1E-17 117.1 14.7 104 58-184 117-247 (479)
190 2avd_A Catechol-O-methyltransf 99.4 5.9E-13 2E-17 107.1 11.6 112 56-184 67-180 (229)
191 2avn_A Ubiquinone/menaquinone 99.4 7.6E-13 2.6E-17 108.8 12.2 107 47-184 43-153 (260)
192 1u2z_A Histone-lysine N-methyl 99.4 1.5E-12 5E-17 114.9 14.4 121 45-183 228-359 (433)
193 3cbg_A O-methyltransferase; cy 99.4 1.1E-12 3.9E-17 106.3 12.6 109 57-184 71-183 (232)
194 2qm3_A Predicted methyltransfe 99.4 4.1E-12 1.4E-16 110.2 16.9 116 58-197 172-296 (373)
195 2b2c_A Spermidine synthase; be 99.4 1.3E-12 4.4E-17 111.0 13.3 143 56-219 106-269 (314)
196 2o07_A Spermidine synthase; st 99.4 1.1E-12 3.7E-17 111.0 12.7 141 57-218 94-255 (304)
197 3b3j_A Histone-arginine methyl 99.4 8.9E-13 3E-17 118.0 12.8 100 57-181 157-261 (480)
198 1i1n_A Protein-L-isoaspartate 99.4 5E-13 1.7E-17 107.4 10.1 112 48-184 67-183 (226)
199 1sqg_A SUN protein, FMU protei 99.4 1.2E-12 4E-17 115.6 13.3 141 36-199 222-393 (429)
200 2h00_A Methyltransferase 10 do 99.4 3.5E-13 1.2E-17 110.4 9.2 85 58-161 65-152 (254)
201 2g72_A Phenylethanolamine N-me 99.4 4.8E-13 1.7E-17 111.6 10.1 130 58-204 71-252 (289)
202 1zq9_A Probable dimethyladenos 99.4 8.4E-13 2.9E-17 110.6 11.5 108 47-180 16-144 (285)
203 3m6w_A RRNA methylase; rRNA me 99.4 6.1E-13 2.1E-17 118.3 10.8 119 56-198 99-247 (464)
204 2f8l_A Hypothetical protein LM 99.4 9.8E-13 3.4E-17 112.8 11.8 116 58-199 130-276 (344)
205 3mcz_A O-methyltransferase; ad 99.4 6E-12 2E-16 107.8 16.7 140 57-220 177-350 (352)
206 1ne2_A Hypothetical protein TA 99.4 3.5E-12 1.2E-16 100.6 13.9 106 57-198 50-160 (200)
207 3gwz_A MMCR; methyltransferase 99.4 1.2E-11 4E-16 107.0 18.1 102 57-184 201-308 (369)
208 2r3s_A Uncharacterized protein 99.4 6.5E-12 2.2E-16 106.7 16.2 103 57-184 164-272 (335)
209 1x19_A CRTF-related protein; m 99.4 9.3E-12 3.2E-16 107.1 17.2 102 56-183 188-295 (359)
210 1qzz_A RDMB, aclacinomycin-10- 99.4 7.7E-12 2.6E-16 107.9 16.6 103 56-184 180-288 (374)
211 2aot_A HMT, histamine N-methyl 99.4 8.8E-13 3E-17 110.4 10.3 108 58-183 52-172 (292)
212 3hp7_A Hemolysin, putative; st 99.4 1.8E-13 6E-18 114.9 6.0 109 48-182 73-184 (291)
213 3mq2_A 16S rRNA methyltransfer 99.4 1.1E-12 3.9E-17 104.8 10.3 102 56-182 25-139 (218)
214 1r18_A Protein-L-isoaspartate( 99.4 5.7E-13 2E-17 107.4 8.5 110 48-184 74-195 (227)
215 2okc_A Type I restriction enzy 99.4 2.1E-12 7.3E-17 114.5 12.6 137 39-198 150-327 (445)
216 3e8s_A Putative SAM dependent 99.4 2.4E-12 8.1E-17 102.7 11.7 101 57-184 51-153 (227)
217 3i53_A O-methyltransferase; CO 99.4 9.8E-12 3.3E-16 105.8 16.1 101 58-184 169-275 (332)
218 1p91_A Ribosomal RNA large sub 99.4 3.6E-12 1.2E-16 105.0 13.0 116 45-193 71-188 (269)
219 2nyu_A Putative ribosomal RNA 99.4 4E-12 1.4E-16 99.6 12.2 123 56-205 20-167 (196)
220 2i7c_A Spermidine synthase; tr 99.4 5.4E-12 1.8E-16 105.6 13.4 127 56-203 76-216 (283)
221 1vlm_A SAM-dependent methyltra 99.4 5.9E-12 2E-16 100.8 13.1 98 50-184 40-140 (219)
222 1tw3_A COMT, carminomycin 4-O- 99.4 1.4E-11 4.7E-16 105.9 16.1 103 57-185 182-290 (360)
223 2bm8_A Cephalosporin hydroxyla 99.4 1.8E-12 6.3E-17 105.6 9.8 102 58-184 81-188 (236)
224 3opn_A Putative hemolysin; str 99.4 4.3E-13 1.5E-17 109.2 6.0 110 48-182 25-136 (232)
225 2dul_A N(2),N(2)-dimethylguano 99.4 4.6E-12 1.6E-16 110.2 12.8 102 58-183 47-164 (378)
226 2zfu_A Nucleomethylin, cerebra 99.4 4E-12 1.4E-16 101.2 11.5 120 57-219 66-191 (215)
227 2cmg_A Spermidine synthase; tr 99.4 4.2E-12 1.4E-16 105.2 11.3 134 57-218 71-215 (262)
228 3cc8_A Putative methyltransfer 99.4 6.2E-12 2.1E-16 100.4 11.9 98 57-184 31-131 (230)
229 2h1r_A Dimethyladenosine trans 99.4 5.6E-12 1.9E-16 106.3 11.8 84 56-166 40-123 (299)
230 3axs_A Probable N(2),N(2)-dime 99.3 5.9E-12 2E-16 109.8 11.5 104 57-183 51-158 (392)
231 3dp7_A SAM-dependent methyltra 99.3 1.4E-11 4.7E-16 106.4 13.6 105 57-184 178-288 (363)
232 2qe6_A Uncharacterized protein 99.3 4.3E-11 1.5E-15 99.6 15.8 111 59-186 78-199 (274)
233 3lcv_B Sisomicin-gentamicin re 99.3 5.4E-12 1.8E-16 103.6 10.0 135 40-200 107-255 (281)
234 1af7_A Chemotaxis receptor met 99.3 1.3E-11 4.5E-16 102.8 11.8 104 58-182 105-251 (274)
235 2b9e_A NOL1/NOP2/SUN domain fa 99.3 3.9E-11 1.3E-15 101.6 14.5 122 56-199 100-253 (309)
236 3gru_A Dimethyladenosine trans 99.3 3E-11 1E-15 101.6 13.6 115 30-171 21-136 (295)
237 2wa2_A Non-structural protein 99.3 3E-12 1E-16 106.9 7.0 120 56-203 80-215 (276)
238 4e2x_A TCAB9; kijanose, tetron 99.3 2.5E-12 8.4E-17 112.8 6.6 99 57-182 106-207 (416)
239 3ldu_A Putative methylase; str 99.3 4.3E-11 1.5E-15 104.3 13.8 103 56-182 193-343 (385)
240 2oxt_A Nucleoside-2'-O-methylt 99.3 2.6E-12 8.8E-17 106.6 5.8 119 56-204 72-208 (265)
241 3k0b_A Predicted N6-adenine-sp 99.3 4.4E-11 1.5E-15 104.5 13.7 104 56-183 199-350 (393)
242 3frh_A 16S rRNA methylase; met 99.3 5E-11 1.7E-15 96.9 12.9 115 41-183 82-206 (253)
243 2ip2_A Probable phenazine-spec 99.3 3.9E-11 1.3E-15 102.0 12.6 99 60-184 169-273 (334)
244 2ih2_A Modification methylase 99.3 1.1E-11 3.9E-16 108.4 9.5 127 39-199 18-184 (421)
245 3ldg_A Putative uncharacterize 99.3 1E-10 3.6E-15 101.8 14.6 104 56-183 192-343 (384)
246 4azs_A Methyltransferase WBDD; 99.3 2.1E-11 7.1E-16 111.3 10.7 104 56-182 64-172 (569)
247 2p41_A Type II methyltransfera 99.2 2.4E-11 8.3E-16 102.7 10.0 117 56-202 80-212 (305)
248 1qam_A ERMC' methyltransferase 99.2 1.7E-10 5.9E-15 94.3 13.9 120 33-180 4-125 (244)
249 3sso_A Methyltransferase; macr 99.2 3.6E-11 1.2E-15 104.6 10.0 115 43-184 201-325 (419)
250 3tqs_A Ribosomal RNA small sub 99.2 1E-10 3.5E-15 96.4 11.9 113 35-171 5-118 (255)
251 2ar0_A M.ecoki, type I restric 99.2 3.7E-11 1.3E-15 109.0 10.0 140 39-199 148-333 (541)
252 3lst_A CALO1 methyltransferase 99.2 1.5E-10 5E-15 99.3 12.8 100 56-184 182-287 (348)
253 3lkd_A Type I restriction-modi 99.2 1.1E-10 3.7E-15 105.8 11.1 142 39-199 196-379 (542)
254 4a6d_A Hydroxyindole O-methylt 99.2 1.2E-09 4.2E-14 93.9 16.9 101 57-184 178-284 (353)
255 3fut_A Dimethyladenosine trans 99.2 1.9E-10 6.3E-15 95.7 11.2 114 31-172 19-133 (271)
256 1yub_A Ermam, rRNA methyltrans 99.2 1.8E-12 6.1E-17 106.0 -1.0 98 56-181 27-143 (245)
257 3giw_A Protein of unknown func 99.2 2.4E-10 8.2E-15 94.9 11.2 113 60-186 80-203 (277)
258 2qfm_A Spermine synthase; sper 99.2 2.5E-10 8.5E-15 98.1 11.6 108 57-182 187-313 (364)
259 2xyq_A Putative 2'-O-methyl tr 99.1 2.5E-10 8.4E-15 95.8 9.3 110 56-205 61-194 (290)
260 3ftd_A Dimethyladenosine trans 99.1 6.4E-10 2.2E-14 91.3 11.2 115 32-173 4-119 (249)
261 3khk_A Type I restriction-modi 99.1 3.3E-10 1.1E-14 102.8 9.8 139 39-199 224-417 (544)
262 4fzv_A Putative methyltransfer 99.1 2.2E-09 7.4E-14 92.5 13.4 122 56-198 146-302 (359)
263 3o4f_A Spermidine synthase; am 99.0 9.4E-09 3.2E-13 86.0 15.8 172 27-219 51-245 (294)
264 3cvo_A Methyltransferase-like 99.0 5.2E-09 1.8E-13 83.1 13.4 130 49-183 21-154 (202)
265 3uzu_A Ribosomal RNA small sub 99.0 1.8E-09 6.1E-14 90.1 10.9 120 31-172 14-137 (279)
266 3reo_A (ISO)eugenol O-methyltr 99.0 1.3E-09 4.3E-14 94.3 10.2 94 57-184 202-301 (368)
267 3s1s_A Restriction endonucleas 99.0 2.8E-09 9.5E-14 99.5 12.9 141 39-200 294-488 (878)
268 1fp1_D Isoliquiritigenin 2'-O- 99.0 1.2E-09 4.3E-14 94.3 10.1 93 57-183 208-306 (372)
269 3p9c_A Caffeic acid O-methyltr 99.0 2.6E-09 8.7E-14 92.2 11.7 94 57-184 200-299 (364)
270 3v97_A Ribosomal RNA large sub 99.0 3.8E-09 1.3E-13 98.6 13.5 105 56-181 188-345 (703)
271 3ll7_A Putative methyltransfer 99.0 1E-09 3.5E-14 96.0 7.3 85 54-161 89-175 (410)
272 1fp2_A Isoflavone O-methyltran 99.0 2.3E-09 7.7E-14 91.9 9.4 95 56-184 186-289 (352)
273 2r6z_A UPF0341 protein in RSP 98.9 5.7E-10 1.9E-14 92.1 4.5 83 57-161 82-173 (258)
274 3ufb_A Type I restriction-modi 98.9 8.7E-09 3E-13 93.2 12.6 141 39-199 196-383 (530)
275 1zg3_A Isoflavanone 4'-O-methy 98.9 6.3E-09 2.2E-13 89.3 11.2 94 57-184 192-294 (358)
276 1m6y_A S-adenosyl-methyltransf 98.9 5.2E-09 1.8E-13 88.2 9.4 95 47-161 14-110 (301)
277 1qyr_A KSGA, high level kasuga 98.9 7E-09 2.4E-13 85.2 9.4 92 56-171 19-112 (252)
278 2ld4_A Anamorsin; methyltransf 98.8 1.8E-09 6.1E-14 83.2 3.8 105 56-200 10-128 (176)
279 4gqb_A Protein arginine N-meth 98.8 3E-08 1E-12 91.0 10.9 112 44-180 337-464 (637)
280 2wk1_A NOVP; transferase, O-me 98.7 1.6E-07 5.6E-12 78.2 13.4 141 58-218 106-280 (282)
281 3c6k_A Spermine synthase; sper 98.7 4.8E-08 1.7E-12 84.3 9.9 145 57-219 204-378 (381)
282 3evf_A RNA-directed RNA polyme 98.7 1.6E-07 5.3E-12 77.5 12.5 134 48-207 63-210 (277)
283 3gcz_A Polyprotein; flavivirus 98.7 1.7E-08 5.6E-13 83.4 6.1 134 48-207 79-227 (282)
284 3ua3_A Protein arginine N-meth 98.7 7.5E-08 2.6E-12 88.7 9.9 117 45-180 393-531 (745)
285 2oyr_A UPF0341 protein YHIQ; a 98.6 6.3E-08 2.2E-12 79.8 5.9 97 57-176 85-193 (258)
286 3eld_A Methyltransferase; flav 98.4 6.8E-07 2.3E-11 74.3 8.5 127 55-207 78-217 (300)
287 2k4m_A TR8_protein, UPF0146 pr 98.3 4.1E-06 1.4E-10 62.6 9.7 103 45-188 22-126 (153)
288 2px2_A Genome polyprotein [con 98.3 1.8E-06 6.2E-11 70.3 7.8 119 55-205 70-207 (269)
289 1wg8_A Predicted S-adenosylmet 98.3 3E-06 1E-10 70.2 9.1 91 47-161 10-101 (285)
290 2qy6_A UPF0209 protein YFCK; s 98.3 2.3E-06 8E-11 70.3 8.2 123 58-203 60-230 (257)
291 4auk_A Ribosomal RNA large sub 98.2 1.9E-05 6.6E-10 67.9 13.6 97 56-184 209-307 (375)
292 3tka_A Ribosomal RNA small sub 98.2 9.3E-06 3.2E-10 68.9 11.1 71 45-121 43-116 (347)
293 3p8z_A Mtase, non-structural p 98.2 4.6E-05 1.6E-09 61.4 13.3 126 48-201 67-206 (267)
294 2zig_A TTHA0409, putative modi 98.1 6.7E-06 2.3E-10 68.8 8.1 58 46-104 223-280 (297)
295 3lkz_A Non-structural protein 98.1 3.5E-05 1.2E-09 63.9 11.1 128 48-202 83-225 (321)
296 2efj_A 3,7-dimethylxanthine me 98.1 2.1E-05 7.2E-10 68.1 10.2 105 59-186 53-228 (384)
297 1g60_A Adenine-specific methyl 98.1 1.2E-05 4.1E-10 66.0 8.1 61 45-106 199-259 (260)
298 2oo3_A Protein involved in cat 98.0 7.1E-06 2.4E-10 68.0 6.0 110 48-182 83-197 (283)
299 3b5i_A S-adenosyl-L-methionine 97.9 3.2E-05 1.1E-09 66.9 8.9 40 146-185 147-227 (374)
300 1i4w_A Mitochondrial replicati 97.8 0.00042 1.4E-08 59.3 13.1 86 31-121 24-117 (353)
301 3r24_A NSP16, 2'-O-methyl tran 97.6 0.0005 1.7E-08 57.1 10.4 110 56-205 107-238 (344)
302 1m6e_X S-adenosyl-L-methionnin 97.5 5.8E-05 2E-09 64.8 3.9 105 60-184 53-210 (359)
303 1boo_A Protein (N-4 cytosine-s 97.4 0.00039 1.3E-08 58.7 7.5 60 46-106 240-299 (323)
304 1eg2_A Modification methylase 97.2 0.00068 2.3E-08 57.2 7.3 60 45-105 229-291 (319)
305 2c7p_A Modification methylase 97.1 0.0032 1.1E-07 53.3 10.5 44 59-102 11-54 (327)
306 3g7u_A Cytosine-specific methy 97.1 0.0045 1.6E-07 53.3 10.8 81 60-161 3-83 (376)
307 1g55_A DNA cytosine methyltran 97.0 0.0008 2.7E-08 57.3 5.7 77 59-161 2-80 (343)
308 3tos_A CALS11; methyltransfera 96.8 0.0057 2E-07 49.9 9.0 127 57-199 68-233 (257)
309 3ubt_Y Modification methylase 96.8 0.0093 3.2E-07 50.0 10.2 73 60-161 1-73 (331)
310 1f8f_A Benzyl alcohol dehydrog 96.5 0.011 3.7E-07 50.4 9.0 102 56-185 188-291 (371)
311 2dph_A Formaldehyde dismutase; 96.4 0.01 3.4E-07 51.2 8.3 106 56-185 183-301 (398)
312 4a2c_A Galactitol-1-phosphate 96.2 0.015 5.1E-07 48.9 8.2 103 56-185 158-262 (346)
313 3ip1_A Alcohol dehydrogenase, 96.2 0.0085 2.9E-07 51.8 6.7 105 56-184 211-319 (404)
314 2qrv_A DNA (cytosine-5)-methyl 96.2 0.013 4.6E-07 48.7 7.5 79 58-161 15-95 (295)
315 3fpc_A NADP-dependent alcohol 96.1 0.0044 1.5E-07 52.5 4.4 101 56-183 164-266 (352)
316 4ej6_A Putative zinc-binding d 96.1 0.025 8.4E-07 48.3 8.9 104 56-184 180-285 (370)
317 2py6_A Methyltransferase FKBM; 96.0 0.021 7.2E-07 49.6 8.0 47 57-103 225-274 (409)
318 1kol_A Formaldehyde dehydrogen 95.9 0.047 1.6E-06 46.9 10.0 105 56-184 183-301 (398)
319 3uko_A Alcohol dehydrogenase c 95.9 0.031 1.1E-06 47.7 8.8 102 56-184 191-296 (378)
320 3qv2_A 5-cytosine DNA methyltr 95.9 0.006 2.1E-07 51.6 4.2 78 58-162 9-89 (327)
321 4b7c_A Probable oxidoreductase 95.9 0.054 1.8E-06 45.3 10.1 101 56-184 147-249 (336)
322 3two_A Mannitol dehydrogenase; 95.9 0.017 6E-07 48.7 6.8 94 56-186 174-268 (348)
323 1pl8_A Human sorbitol dehydrog 95.8 0.03 1E-06 47.4 8.2 102 56-184 169-274 (356)
324 3m6i_A L-arabinitol 4-dehydrog 95.8 0.026 8.8E-07 47.8 7.7 106 56-184 177-284 (363)
325 3s2e_A Zinc-containing alcohol 95.8 0.034 1.2E-06 46.6 8.4 101 56-185 164-265 (340)
326 1p0f_A NADP-dependent alcohol 95.8 0.05 1.7E-06 46.3 9.4 102 56-184 189-294 (373)
327 2vz8_A Fatty acid synthase; tr 95.8 0.0027 9.3E-08 66.7 1.7 100 58-183 1240-1348(2512)
328 3uog_A Alcohol dehydrogenase; 95.7 0.0054 1.8E-07 52.3 3.2 101 56-184 187-288 (363)
329 4h0n_A DNMT2; SAH binding, tra 95.7 0.0067 2.3E-07 51.4 3.7 76 60-161 4-81 (333)
330 3jyn_A Quinone oxidoreductase; 95.6 0.007 2.4E-07 50.6 3.2 101 56-184 138-240 (325)
331 4dvj_A Putative zinc-dependent 95.5 0.073 2.5E-06 45.2 9.6 96 58-182 171-269 (363)
332 2fzw_A Alcohol dehydrogenase c 95.5 0.072 2.5E-06 45.2 9.5 102 56-184 188-293 (373)
333 3qwb_A Probable quinone oxidor 95.5 0.0089 3.1E-07 50.1 3.7 100 56-183 146-247 (334)
334 3jv7_A ADH-A; dehydrogenase, n 95.5 0.009 3.1E-07 50.4 3.7 102 55-184 168-271 (345)
335 4eez_A Alcohol dehydrogenase 1 95.4 0.024 8.4E-07 47.6 6.2 102 56-184 161-264 (348)
336 3me5_A Cytosine-specific methy 95.4 0.024 8.1E-07 50.5 6.2 42 60-101 89-130 (482)
337 1pqw_A Polyketide synthase; ro 95.4 0.0057 1.9E-07 47.2 1.9 100 56-184 36-138 (198)
338 1cdo_A Alcohol dehydrogenase; 95.3 0.073 2.5E-06 45.3 8.8 102 56-184 190-295 (374)
339 1e3j_A NADP(H)-dependent ketos 95.2 0.018 6.2E-07 48.7 4.7 103 56-184 166-272 (352)
340 1v3u_A Leukotriene B4 12- hydr 95.2 0.098 3.4E-06 43.6 9.2 101 56-184 143-245 (333)
341 1vj0_A Alcohol dehydrogenase, 95.2 0.012 4.3E-07 50.3 3.6 104 56-185 193-300 (380)
342 2jhf_A Alcohol dehydrogenase E 95.1 0.1 3.4E-06 44.4 9.1 102 56-184 189-294 (374)
343 1uuf_A YAHK, zinc-type alcohol 95.1 0.016 5.5E-07 49.5 4.0 98 56-185 192-290 (369)
344 3gms_A Putative NADPH:quinone 95.1 0.0085 2.9E-07 50.5 2.2 101 56-184 142-244 (340)
345 1e3i_A Alcohol dehydrogenase, 95.0 0.087 3E-06 44.8 8.5 102 56-184 193-298 (376)
346 4dcm_A Ribosomal RNA large sub 94.8 0.74 2.5E-05 39.3 13.8 116 58-202 38-155 (375)
347 2d8a_A PH0655, probable L-thre 94.8 0.032 1.1E-06 47.0 5.0 100 58-184 167-268 (348)
348 3nx4_A Putative oxidoreductase 94.7 0.067 2.3E-06 44.4 6.8 92 61-184 149-242 (324)
349 2j3h_A NADP-dependent oxidored 94.7 0.073 2.5E-06 44.6 7.0 102 56-184 153-256 (345)
350 3fwz_A Inner membrane protein 94.7 0.27 9.2E-06 35.5 9.3 96 59-182 7-104 (140)
351 2zb4_A Prostaglandin reductase 94.7 0.21 7.1E-06 42.0 9.8 101 56-184 156-261 (357)
352 1rjw_A ADH-HT, alcohol dehydro 94.6 0.15 5E-06 42.8 8.7 100 56-184 162-262 (339)
353 2hcy_A Alcohol dehydrogenase 1 94.5 0.11 3.6E-06 43.8 7.5 102 56-184 167-270 (347)
354 2eih_A Alcohol dehydrogenase; 94.4 0.022 7.4E-07 48.0 3.1 101 56-184 164-266 (343)
355 2c0c_A Zinc binding alcohol de 94.4 0.21 7.2E-06 42.2 9.3 100 56-184 161-262 (362)
356 3fbg_A Putative arginate lyase 94.3 0.2 6.9E-06 42.0 8.9 96 58-182 150-247 (346)
357 1qor_A Quinone oxidoreductase; 94.3 0.02 7E-07 47.7 2.7 100 56-184 138-240 (327)
358 1jvb_A NAD(H)-dependent alcoho 94.3 0.092 3.2E-06 44.1 6.7 102 56-185 168-273 (347)
359 3vyw_A MNMC2; tRNA wobble urid 94.3 0.2 7E-06 41.8 8.6 68 147-218 184-259 (308)
360 2h6e_A ADH-4, D-arabinose 1-de 94.2 0.028 9.4E-07 47.3 3.2 98 58-184 170-270 (344)
361 1wly_A CAAR, 2-haloacrylate re 94.0 0.043 1.5E-06 45.9 4.0 101 56-184 143-245 (333)
362 1yb5_A Quinone oxidoreductase; 94.0 0.035 1.2E-06 47.0 3.5 100 56-183 168-269 (351)
363 2uyo_A Hypothetical protein ML 94.0 1.5 5.2E-05 36.4 13.5 126 46-186 89-221 (310)
364 4dup_A Quinone oxidoreductase; 93.9 0.16 5.6E-06 42.7 7.5 100 56-184 165-266 (353)
365 4eye_A Probable oxidoreductase 93.7 0.022 7.7E-07 47.9 1.8 100 56-184 157-258 (342)
366 2cf5_A Atccad5, CAD, cinnamyl 93.7 0.047 1.6E-06 46.2 3.7 97 56-184 177-276 (357)
367 1piw_A Hypothetical zinc-type 93.7 0.058 2E-06 45.7 4.3 100 56-184 177-277 (360)
368 2hwk_A Helicase NSP2; rossman 93.6 0.8 2.7E-05 37.7 10.6 59 148-206 205-279 (320)
369 1rjd_A PPM1P, carboxy methyl t 93.5 1.4 4.7E-05 37.1 12.5 123 44-181 81-230 (334)
370 3llv_A Exopolyphosphatase-rela 93.5 1.1 3.6E-05 32.1 10.4 92 59-181 6-101 (141)
371 2zig_A TTHA0409, putative modi 93.4 0.066 2.3E-06 44.2 4.1 37 146-182 37-96 (297)
372 2j8z_A Quinone oxidoreductase; 93.4 0.05 1.7E-06 46.0 3.4 101 56-184 160-262 (354)
373 3gaz_A Alcohol dehydrogenase s 93.4 0.059 2E-06 45.3 3.8 96 56-182 148-245 (343)
374 1yqd_A Sinapyl alcohol dehydro 93.1 0.17 5.9E-06 42.9 6.4 98 56-184 184-283 (366)
375 3krt_A Crotonyl COA reductase; 92.9 0.089 3E-06 46.1 4.3 117 56-184 226-345 (456)
376 3goh_A Alcohol dehydrogenase, 92.8 0.17 5.7E-06 41.9 5.8 88 56-182 140-228 (315)
377 1xa0_A Putative NADPH dependen 92.8 0.09 3.1E-06 43.8 4.1 99 56-184 146-247 (328)
378 2b5w_A Glucose dehydrogenase; 92.8 0.33 1.1E-05 40.8 7.8 99 56-185 164-275 (357)
379 2dq4_A L-threonine 3-dehydroge 92.8 0.15 5.2E-06 42.7 5.6 98 58-184 164-263 (343)
380 1tt7_A YHFP; alcohol dehydroge 92.7 0.083 2.8E-06 44.0 3.7 98 56-184 147-248 (330)
381 1boo_A Protein (N-4 cytosine-s 92.6 0.084 2.9E-06 44.3 3.6 37 146-182 30-83 (323)
382 3c85_A Putative glutathione-re 92.2 1.6 5.6E-05 32.6 10.3 97 59-182 39-138 (183)
383 3pvc_A TRNA 5-methylaminomethy 92.2 0.31 1E-05 45.0 7.2 53 147-203 169-228 (689)
384 1iz0_A Quinone oxidoreductase; 92.1 0.18 6.2E-06 41.4 5.0 94 56-183 123-218 (302)
385 4fs3_A Enoyl-[acyl-carrier-pro 91.9 1.5 5.2E-05 34.9 10.3 60 58-120 5-69 (256)
386 3tqh_A Quinone oxidoreductase; 91.9 1.1 3.9E-05 36.8 9.8 94 56-183 150-245 (321)
387 3o38_A Short chain dehydrogena 91.8 1.5 5E-05 34.9 10.2 61 58-121 21-85 (266)
388 3l9w_A Glutathione-regulated p 91.8 0.94 3.2E-05 39.2 9.5 95 59-181 4-100 (413)
389 1g60_A Adenine-specific methyl 91.8 0.15 5E-06 41.3 4.0 37 146-182 20-73 (260)
390 3dmg_A Probable ribosomal RNA 91.7 1.8 6.2E-05 37.0 11.1 134 48-216 34-173 (381)
391 4g81_D Putative hexonate dehyd 91.7 1.3 4.6E-05 35.7 9.7 86 58-159 8-96 (255)
392 2g1u_A Hypothetical protein TM 91.4 0.71 2.4E-05 33.8 7.3 100 57-183 17-118 (155)
393 3ggo_A Prephenate dehydrogenas 91.4 3 0.0001 34.5 11.9 90 60-181 34-126 (314)
394 4fgs_A Probable dehydrogenase 91.2 1.1 3.7E-05 36.6 8.7 105 58-181 28-157 (273)
395 3pxx_A Carveol dehydrogenase; 90.8 2.3 7.7E-05 34.1 10.4 108 58-181 9-151 (287)
396 1lss_A TRK system potassium up 90.8 3 0.0001 29.1 11.1 93 59-181 4-100 (140)
397 2cdc_A Glucose dehydrogenase g 90.8 0.14 4.8E-06 43.4 3.1 94 59-185 181-280 (366)
398 3swr_A DNA (cytosine-5)-methyl 90.7 0.44 1.5E-05 46.0 6.6 42 60-101 541-583 (1002)
399 4a0s_A Octenoyl-COA reductase/ 90.6 0.77 2.6E-05 39.8 7.8 112 56-184 218-337 (447)
400 1eg2_A Modification methylase 90.5 0.21 7.1E-06 41.9 3.8 37 146-182 55-105 (319)
401 4fn4_A Short chain dehydrogena 90.3 0.87 3E-05 36.8 7.3 85 58-158 6-93 (254)
402 3l4b_C TRKA K+ channel protien 90.3 3.5 0.00012 31.7 10.7 92 61-181 2-97 (218)
403 3ps9_A TRNA 5-methylaminomethy 89.9 1.4 4.8E-05 40.3 9.3 49 147-199 177-231 (676)
404 3hwr_A 2-dehydropantoate 2-red 89.8 2.2 7.4E-05 35.3 9.6 113 58-195 18-132 (318)
405 4eso_A Putative oxidoreductase 89.7 1.8 6.3E-05 34.3 8.8 105 58-181 7-136 (255)
406 2y0c_A BCEC, UDP-glucose dehyd 89.7 1.2 4E-05 39.4 8.2 112 58-198 7-144 (478)
407 3oig_A Enoyl-[acyl-carrier-pro 89.6 3.9 0.00013 32.3 10.7 109 58-181 6-145 (266)
408 2vn8_A Reticulon-4-interacting 89.5 0.28 9.5E-06 41.6 3.9 99 56-184 181-281 (375)
409 3tjr_A Short chain dehydrogena 89.4 2 6.9E-05 35.0 9.1 60 58-121 30-92 (301)
410 3trk_A Nonstructural polyprote 89.3 0.49 1.7E-05 38.6 4.9 59 147-205 209-283 (324)
411 3pi7_A NADH oxidoreductase; gr 89.2 0.23 7.8E-06 41.7 3.1 98 57-184 162-264 (349)
412 3ioy_A Short-chain dehydrogena 89.0 3.6 0.00012 33.8 10.4 62 58-121 7-71 (319)
413 3grk_A Enoyl-(acyl-carrier-pro 88.9 5.5 0.00019 32.2 11.4 107 58-181 30-167 (293)
414 3h7a_A Short chain dehydrogena 88.9 3.1 0.00011 32.9 9.6 60 58-121 6-68 (252)
415 3ojo_A CAP5O; rossmann fold, c 88.6 4.4 0.00015 35.3 11.0 108 58-198 10-145 (431)
416 3t4x_A Oxidoreductase, short c 88.4 4.1 0.00014 32.4 10.1 83 58-158 9-94 (267)
417 1zkd_A DUF185; NESG, RPR58, st 88.2 3.8 0.00013 35.2 10.1 42 60-101 82-131 (387)
418 3u5t_A 3-oxoacyl-[acyl-carrier 88.1 2.5 8.7E-05 33.8 8.6 108 58-181 26-159 (267)
419 3ijr_A Oxidoreductase, short c 88.0 4.2 0.00014 32.9 10.0 108 58-181 46-180 (291)
420 1id1_A Putative potassium chan 87.9 5.9 0.0002 28.5 10.1 97 59-182 3-104 (153)
421 3gqv_A Enoyl reductase; medium 87.9 2 6.7E-05 36.3 8.2 98 57-183 163-263 (371)
422 3gg2_A Sugar dehydrogenase, UD 87.7 4.4 0.00015 35.4 10.5 111 60-199 3-139 (450)
423 3lf2_A Short chain oxidoreduct 87.4 5.5 0.00019 31.6 10.3 61 58-121 7-71 (265)
424 3tfo_A Putative 3-oxoacyl-(acy 87.4 3.7 0.00013 32.9 9.2 60 58-121 3-65 (264)
425 3r3s_A Oxidoreductase; structu 87.4 3.7 0.00013 33.3 9.3 108 58-181 48-183 (294)
426 3k31_A Enoyl-(acyl-carrier-pro 87.3 4.8 0.00016 32.6 10.0 107 58-181 29-166 (296)
427 3ksu_A 3-oxoacyl-acyl carrier 87.3 1.9 6.5E-05 34.4 7.4 107 58-181 10-145 (262)
428 3o26_A Salutaridine reductase; 86.9 1.6 5.6E-05 35.1 6.9 88 58-159 11-101 (311)
429 3is3_A 17BETA-hydroxysteroid d 86.8 4.1 0.00014 32.5 9.2 108 58-181 17-150 (270)
430 3v2g_A 3-oxoacyl-[acyl-carrier 86.6 5.6 0.00019 31.8 9.9 108 58-181 30-163 (271)
431 4f3n_A Uncharacterized ACR, CO 86.2 5.4 0.00018 34.8 10.0 44 59-102 138-187 (432)
432 3pgx_A Carveol dehydrogenase; 86.0 4.5 0.00015 32.4 9.1 60 58-121 14-89 (280)
433 4imr_A 3-oxoacyl-(acyl-carrier 85.8 3.2 0.00011 33.3 8.1 60 58-121 32-94 (275)
434 3f9i_A 3-oxoacyl-[acyl-carrier 85.7 8.5 0.00029 29.9 10.4 79 58-159 13-94 (249)
435 3f1l_A Uncharacterized oxidore 85.7 6.7 0.00023 30.8 9.8 58 58-118 11-71 (252)
436 3sx2_A Putative 3-ketoacyl-(ac 85.7 4.6 0.00016 32.2 8.9 60 58-121 12-86 (278)
437 3ftp_A 3-oxoacyl-[acyl-carrier 85.6 4.4 0.00015 32.4 8.8 59 58-120 27-88 (270)
438 3t7c_A Carveol dehydrogenase; 85.5 7 0.00024 31.7 10.1 60 58-121 27-101 (299)
439 3edm_A Short chain dehydrogena 85.4 4.3 0.00015 32.1 8.6 108 58-181 7-141 (259)
440 1wma_A Carbonyl reductase [NAD 85.4 4.9 0.00017 31.5 8.9 59 58-121 3-66 (276)
441 3sju_A Keto reductase; short-c 85.3 2.3 8E-05 34.2 7.0 60 58-121 23-85 (279)
442 3gvc_A Oxidoreductase, probabl 85.3 6.6 0.00023 31.5 9.8 57 58-121 28-87 (277)
443 3ucx_A Short chain dehydrogena 85.3 4 0.00014 32.4 8.4 60 58-121 10-72 (264)
444 3tsc_A Putative oxidoreductase 85.0 5.4 0.00019 31.8 9.1 60 58-121 10-85 (277)
445 4a27_A Synaptic vesicle membra 85.0 1.3 4.5E-05 36.9 5.5 97 56-184 140-239 (349)
446 3r1i_A Short-chain type dehydr 84.9 3.4 0.00012 33.2 7.8 60 58-121 31-93 (276)
447 3oec_A Carveol dehydrogenase ( 84.9 6.4 0.00022 32.2 9.7 60 58-121 45-119 (317)
448 2ew2_A 2-dehydropantoate 2-red 84.8 7.5 0.00026 31.3 10.0 101 60-182 4-107 (316)
449 3uve_A Carveol dehydrogenase ( 84.7 5.5 0.00019 31.9 9.0 60 58-121 10-88 (286)
450 4egf_A L-xylulose reductase; s 84.5 3.8 0.00013 32.6 7.9 60 58-121 19-82 (266)
451 4e12_A Diketoreductase; oxidor 84.4 5.5 0.00019 32.1 8.9 109 60-196 5-133 (283)
452 2f1k_A Prephenate dehydrogenas 84.1 5.8 0.0002 31.6 8.9 86 61-181 2-89 (279)
453 4dry_A 3-oxoacyl-[acyl-carrier 84.0 6 0.0002 31.8 8.9 61 58-121 32-95 (281)
454 3nyw_A Putative oxidoreductase 83.8 4 0.00014 32.2 7.7 63 58-121 6-71 (250)
455 2hmt_A YUAA protein; RCK, KTN, 83.7 6.2 0.00021 27.5 8.0 36 58-96 5-44 (144)
456 3hn2_A 2-dehydropantoate 2-red 83.7 3.1 0.00011 34.1 7.2 112 60-196 3-116 (312)
457 2g5c_A Prephenate dehydrogenas 83.7 11 0.00037 30.1 10.3 89 61-182 3-95 (281)
458 3ek2_A Enoyl-(acyl-carrier-pro 83.6 7.7 0.00026 30.5 9.4 59 58-121 13-76 (271)
459 4ft4_B DNA (cytosine-5)-methyl 83.5 1.2 4E-05 41.8 4.9 43 59-101 212-260 (784)
460 4dkj_A Cytosine-specific methy 83.5 1.2 4.2E-05 38.5 4.7 43 60-102 11-59 (403)
461 1gu7_A Enoyl-[acyl-carrier-pro 83.1 3 0.0001 34.8 7.0 106 56-184 164-276 (364)
462 3ce6_A Adenosylhomocysteinase; 83.1 1.7 5.9E-05 38.6 5.6 91 56-186 271-364 (494)
463 4gua_A Non-structural polyprot 82.9 2.5 8.5E-05 38.1 6.4 60 146-205 218-293 (670)
464 2eez_A Alanine dehydrogenase; 82.8 0.98 3.4E-05 38.3 3.8 95 58-183 165-266 (369)
465 4e6p_A Probable sorbitol dehyd 82.7 9.6 0.00033 30.0 9.6 57 58-121 7-66 (259)
466 3lyl_A 3-oxoacyl-(acyl-carrier 82.5 6 0.0002 30.8 8.2 86 58-159 4-92 (247)
467 3d1l_A Putative NADP oxidoredu 82.4 7.9 0.00027 30.6 9.0 89 59-181 10-100 (266)
468 3qiv_A Short-chain dehydrogena 82.4 4.1 0.00014 31.9 7.2 60 58-121 8-70 (253)
469 3i83_A 2-dehydropantoate 2-red 82.1 4.4 0.00015 33.3 7.5 49 148-196 70-118 (320)
470 3imf_A Short chain dehydrogena 81.3 9.4 0.00032 30.0 9.0 60 58-121 5-67 (257)
471 4fc7_A Peroxisomal 2,4-dienoyl 81.3 7.3 0.00025 31.1 8.4 60 58-121 26-89 (277)
472 1zsy_A Mitochondrial 2-enoyl t 81.3 6.7 0.00023 32.6 8.5 99 56-183 165-270 (357)
473 1geg_A Acetoin reductase; SDR 81.2 13 0.00043 29.1 9.7 58 59-120 2-62 (256)
474 3gaf_A 7-alpha-hydroxysteroid 81.2 4.3 0.00015 32.1 6.9 60 58-121 11-73 (256)
475 3rkr_A Short chain oxidoreduct 80.9 3.9 0.00013 32.4 6.6 60 58-121 28-90 (262)
476 2aef_A Calcium-gated potassium 80.9 13 0.00043 28.8 9.5 94 58-182 8-104 (234)
477 3oid_A Enoyl-[acyl-carrier-pro 80.8 9.8 0.00033 30.0 8.9 60 58-121 3-66 (258)
478 1g0o_A Trihydroxynaphthalene r 80.8 11 0.00037 30.1 9.3 59 58-120 28-90 (283)
479 1ja9_A 4HNR, 1,3,6,8-tetrahydr 80.5 8.5 0.00029 30.2 8.5 58 58-120 20-82 (274)
480 3v8b_A Putative dehydrogenase, 80.4 4.6 0.00016 32.5 6.9 60 58-121 27-89 (283)
481 3pk0_A Short-chain dehydrogena 80.3 4.3 0.00015 32.2 6.7 61 58-121 9-72 (262)
482 3s55_A Putative short-chain de 80.1 14 0.00049 29.3 9.8 60 58-121 9-83 (281)
483 2a4k_A 3-oxoacyl-[acyl carrier 80.1 10 0.00035 30.0 8.9 56 58-120 5-63 (263)
484 1lnq_A MTHK channels, potassiu 79.9 16 0.00056 29.9 10.4 92 59-181 115-209 (336)
485 1pjc_A Protein (L-alanine dehy 79.9 1.8 6E-05 36.6 4.4 42 59-101 167-210 (361)
486 3rku_A Oxidoreductase YMR226C; 79.9 8.6 0.00029 31.0 8.4 88 58-158 32-124 (287)
487 3k96_A Glycerol-3-phosphate de 79.9 7.6 0.00026 32.7 8.3 101 59-181 29-131 (356)
488 3l6e_A Oxidoreductase, short-c 79.9 12 0.00042 29.0 9.1 55 59-120 3-60 (235)
489 1h2b_A Alcohol dehydrogenase; 79.6 2.1 7.3E-05 35.8 4.8 99 56-184 184-286 (359)
490 1xg5_A ARPG836; short chain de 79.3 21 0.00073 28.1 11.7 61 58-121 31-95 (279)
491 4a7p_A UDP-glucose dehydrogena 79.1 7.9 0.00027 33.8 8.4 112 59-199 8-146 (446)
492 3gt0_A Pyrroline-5-carboxylate 78.9 6.6 0.00023 30.9 7.3 102 60-196 3-109 (247)
493 3sc4_A Short chain dehydrogena 78.9 8.5 0.00029 30.9 8.1 60 58-121 8-77 (285)
494 4dmm_A 3-oxoacyl-[acyl-carrier 78.8 13 0.00045 29.5 9.2 60 58-121 27-90 (269)
495 3i1j_A Oxidoreductase, short c 78.7 5.7 0.0002 30.8 6.9 58 58-118 13-73 (247)
496 2cvz_A Dehydrogenase, 3-hydrox 78.5 21 0.00071 28.3 10.3 100 61-198 3-106 (289)
497 4ezb_A Uncharacterized conserv 78.4 16 0.00055 30.0 9.8 50 149-198 87-137 (317)
498 3rd5_A Mypaa.01249.C; ssgcid, 78.4 9.7 0.00033 30.5 8.3 79 58-159 15-96 (291)
499 3b1f_A Putative prephenate deh 78.2 14 0.00047 29.6 9.2 88 60-180 7-98 (290)
500 4dqx_A Probable oxidoreductase 78.2 18 0.0006 28.9 9.8 57 58-121 26-85 (277)
No 1
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.95 E-value=8.7e-27 Score=185.94 Aligned_cols=194 Identities=34% Similarity=0.443 Sum_probs=168.0
Q ss_pred CCccceEeccceeeeecCCCCC--CCcceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHH
Q 047371 1 ESFHPVEVTKGLWIVPEWSTPP--DVQATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIK 78 (222)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~ 78 (222)
++|+|+.+....+++|.|.+.. ..+...+.++|+..|+++.++....+.+.+....+++.+|||+|||+|.++..+++
T Consensus 1 ~~~~~~~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~ 80 (205)
T 3grz_A 1 KYYHVINLSRHLAIVPEWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHK 80 (205)
T ss_dssp CCCCCEEEETTEEEEETTCCCCCSSTTCEEEEESCC-----CCHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHH
T ss_pred CCCCcEEECCcEEEeccccccccCCCCceeEEecCCcccCCCCCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHH
Confidence 5899999999999999999864 36678899999999999999999999999988888899999999999999999998
Q ss_pred hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccc
Q 047371 79 FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANIL 158 (222)
Q Consensus 79 ~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~ 158 (222)
.+..+++|+|+++.+++.|++++..+++. ++.+...|.... ..++||+|+++.+
T Consensus 81 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~------------------------~~~~fD~i~~~~~ 134 (205)
T 3grz_A 81 LGAKSVLATDISDESMTAAEENAALNGIY--DIALQKTSLLAD------------------------VDGKFDLIVANIL 134 (205)
T ss_dssp TTCSEEEEEESCHHHHHHHHHHHHHTTCC--CCEEEESSTTTT------------------------CCSCEEEEEEESC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEecccccc------------------------CCCCceEEEECCc
Confidence 87779999999999999999999888875 488888876543 4578999999999
Q ss_pred cccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcceecccCCceEeecccCC
Q 047371 159 LNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDILVSEKDDWRCVSGTKFS 220 (222)
Q Consensus 159 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~~k~~ 220 (222)
++++..+++++.++|||||.++++++...+..++.+.+.+. |........+.|.++..++..
T Consensus 135 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~~ 197 (205)
T 3grz_A 135 AEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISRKH 197 (205)
T ss_dssp HHHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEETTEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeeccCCEEEEEEeccc
Confidence 99889999999999999999999888888888898888875 888888899999999888754
No 2
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.95 E-value=3e-27 Score=195.58 Aligned_cols=188 Identities=28% Similarity=0.476 Sum_probs=161.3
Q ss_pred CccceEeccceeeeecCCCCCCCcceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCC
Q 047371 2 SFHPVEVTKGLWIVPEWSTPPDVQATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGA 81 (222)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~ 81 (222)
+|+|+.++. .++.|+|..+ ......+.++|+..|++|.|++++++.+.+...++++.+|||+|||+|.+++.+++.+.
T Consensus 66 ~~~p~~~~~-~~i~~~w~~~-~~~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~ 143 (254)
T 2nxc_A 66 DLKPALAPP-FVVLAPWHTW-EGAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG 143 (254)
T ss_dssp HCCCEEETT-EEEECTTCCC-CSSSEEEECCCC-----CCSHHHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC
T ss_pred hCCCEEEec-EEEeCCCCCC-CCCceEEEECCCccccCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC
Confidence 689999999 9999999984 66788999999999999999999999999988888899999999999999999988875
Q ss_pred CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc
Q 047371 82 AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 82 ~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
+++|+|+++.+++.|++++..+++. +.+...+.... + +.++||+|++|.+.+.
T Consensus 144 -~v~gvDi~~~~v~~a~~n~~~~~~~---v~~~~~d~~~~----------~-------------~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 144 -KALGVDIDPMVLPQAEANAKRNGVR---PRFLEGSLEAA----------L-------------PFGPFDLLVANLYAEL 196 (254)
T ss_dssp -EEEEEESCGGGHHHHHHHHHHTTCC---CEEEESCHHHH----------G-------------GGCCEEEEEEECCHHH
T ss_pred -eEEEEECCHHHHHHHHHHHHHcCCc---EEEEECChhhc----------C-------------cCCCCCEEEECCcHHH
Confidence 9999999999999999999887753 66666554321 0 3567999999998888
Q ss_pred HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcceecccCCceEeeccc
Q 047371 162 LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDILVSEKDDWRCVSGTK 218 (222)
Q Consensus 162 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~~k 218 (222)
+..+++.+.++|||||+++++++...+..++.+.+... |...+....++|.++..+|
T Consensus 197 ~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 197 HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEeccCCeEEEEEEC
Confidence 88999999999999999999988888999999999876 8888899999999998875
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.78 E-value=6.4e-18 Score=140.19 Aligned_cols=118 Identities=17% Similarity=0.249 Sum_probs=97.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh---CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCc
Q 047371 43 ATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKF---GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR 119 (222)
Q Consensus 43 ~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~ 119 (222)
....++..++..+++++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|++++...+.. .++++...|..
T Consensus 55 ~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~-~~v~~~~~D~~ 133 (261)
T 4gek_A 55 NIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP-TPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS-SCEEEEESCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC-ceEEEeecccc
Confidence 3445556666677899999999999999999999875 3458999999999999999998877765 47899988876
Q ss_pred ccccccccccccchhccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCC
Q 047371 120 TFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
.+ +.++||+|+++..++++ ..+++++++.|||||.+++++..
T Consensus 134 ~~------------------------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 134 DI------------------------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp TC------------------------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cc------------------------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 65 55679999999888763 34799999999999999997543
No 4
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.74 E-value=1.2e-16 Score=139.16 Aligned_cols=163 Identities=18% Similarity=0.212 Sum_probs=125.6
Q ss_pred eEEeCCCcccccCCcchhHHHHHHHHhhhc----CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh
Q 047371 28 NIILNPGLAFGTGEHATTKLCLLLLQSLIK----GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL 103 (222)
Q Consensus 28 ~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~----~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~ 103 (222)
.+...|+..+..+..+.+..+.+.+..... ++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++++..
T Consensus 199 ~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g-~~V~gvDis~~al~~A~~n~~~ 277 (381)
T 3dmg_A 199 TFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG-AEVVGVEDDLASVLSLQKGLEA 277 (381)
T ss_dssp EEEECTTCTTTTSCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT-CEEEEEESBHHHHHHHHHHHHH
T ss_pred EEEeCCCceeCCCCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHH
Confidence 566677777666677788888888876543 68899999999999999999885 5999999999999999999988
Q ss_pred cCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc--------HHHHHHHHHHcccC
Q 047371 104 NNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------LPQLADHIVSYAKP 175 (222)
Q Consensus 104 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------~~~~l~~~~~~Lkp 175 (222)
+++ ++++...|...... +.++||+|++|+++++ ...+++++.++|||
T Consensus 278 ~~~---~v~~~~~D~~~~~~----------------------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lkp 332 (381)
T 3dmg_A 278 NAL---KAQALHSDVDEALT----------------------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRP 332 (381)
T ss_dssp TTC---CCEEEECSTTTTSC----------------------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEE
T ss_pred cCC---CeEEEEcchhhccc----------------------cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCc
Confidence 875 36777777755421 3478999999999876 34689999999999
Q ss_pred CeEEEEecCCCCcHHHHHHHHHhhhhcceecccCCceEeecccC
Q 047371 176 GAVVGISGILSEQLPRIINRYSEFLEDILVSEKDDWRCVSGTKF 219 (222)
Q Consensus 176 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~k~ 219 (222)
||.+++++...... ...+...|...+.....++..+...+.
T Consensus 333 GG~l~iv~n~~l~~---~~~l~~~f~~v~~l~~~gF~Vl~a~~~ 373 (381)
T 3dmg_A 333 GGVFFLVSNPFLKY---EPLLEEKFGAFQTLKVAEYKVLFAEKR 373 (381)
T ss_dssp EEEEEEEECTTSCH---HHHHHHHHSCCEEEEESSSEEEEEECC
T ss_pred CcEEEEEEcCCCCh---HHHHHHhhccEEEEeCCCEEEEEEEEe
Confidence 99999975544433 333344444454446778887777664
No 5
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.73 E-value=1.4e-16 Score=124.43 Aligned_cols=138 Identities=19% Similarity=0.250 Sum_probs=111.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+++.+|||+|||+|.++..+++. ..+++|+|+++.+++.|++++...++...++.+...+.....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-------------- 115 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-------------- 115 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--------------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc--------------
Confidence 47889999999999999998888 579999999999999999999887765213888887764431
Q ss_pred ccccccCCCCCCCeeEEEecccccc----HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhhhhccee-cccCCc
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP----LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLEDILV-SEKDDW 211 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w 211 (222)
+.++||+|++++++++ ...+++.+.++|+|||.+++.........++.+.+.+.|..++. .....|
T Consensus 116 ---------~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 186 (194)
T 1dus_A 116 ---------KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGY 186 (194)
T ss_dssp ---------TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEETTE
T ss_pred ---------ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCCcE
Confidence 4568999999998775 45689999999999999999877777777788888887655554 456778
Q ss_pred eEeeccc
Q 047371 212 RCVSGTK 218 (222)
Q Consensus 212 ~~~~~~k 218 (222)
..+..+|
T Consensus 187 ~~~~~~k 193 (194)
T 1dus_A 187 RVLKSKK 193 (194)
T ss_dssp EEEEEEC
T ss_pred EEEEEee
Confidence 8877665
No 6
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.73 E-value=9.9e-17 Score=126.05 Aligned_cols=131 Identities=22% Similarity=0.242 Sum_probs=98.3
Q ss_pred eeEEeCCCcccccCCcchhHHHHHHHHhhh-----cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHH
Q 047371 27 TNIILNPGLAFGTGEHATTKLCLLLLQSLI-----KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~-----~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~ 101 (222)
..+.+++ .. .++++..+.+.+...+ .++.+|||+|||+|.++..++..+..+|+|+|+++.+++.|++++
T Consensus 13 ~~l~~~~-~~----~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~ 87 (189)
T 3p9n_A 13 RRIAVPP-RG----TRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNI 87 (189)
T ss_dssp CEEECCS-CC----C---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHH
T ss_pred cEecCCC-CC----CccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHH
Confidence 4455555 22 3444444444433332 478899999999999999888877789999999999999999999
Q ss_pred HhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc----HHHHHHHHHH--cccC
Q 047371 102 ALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP----LPQLADHIVS--YAKP 175 (222)
Q Consensus 102 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~----~~~~l~~~~~--~Lkp 175 (222)
..+++. ++++...|...+.. .. +.++||+|++++++++ ...+++.+.+ +|||
T Consensus 88 ~~~~~~--~v~~~~~d~~~~~~-------~~-------------~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~p 145 (189)
T 3p9n_A 88 EALGLS--GATLRRGAVAAVVA-------AG-------------TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTRE 145 (189)
T ss_dssp HHHTCS--CEEEEESCHHHHHH-------HC-------------CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCT
T ss_pred HHcCCC--ceEEEEccHHHHHh-------hc-------------cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCC
Confidence 888873 78898888755421 00 3678999999999886 4568899998 9999
Q ss_pred CeEEEEecC
Q 047371 176 GAVVGISGI 184 (222)
Q Consensus 176 gG~l~~~~~ 184 (222)
||.+++...
T Consensus 146 gG~l~~~~~ 154 (189)
T 3p9n_A 146 GTVAVVERA 154 (189)
T ss_dssp TCEEEEEEE
T ss_pred CeEEEEEec
Confidence 999999643
No 7
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.71 E-value=5.1e-16 Score=123.26 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=101.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++..+++. ++++...+......
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~----------- 104 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVAR--NVTLVEAFAPEGLD----------- 104 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCT--TEEEEECCTTTTCT-----------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEeCChhhhhh-----------
Confidence 567899999999999999999887 3579999999999999999999888874 78888887643311
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
..++||+|+++.+.+....+++++.+.|||||.+++.+.......++.+.+.+.
T Consensus 105 -----------~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 105 -----------DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp -----------TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHT
T ss_pred -----------cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHC
Confidence 346799999999888888999999999999999999877767777777777664
No 8
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=3.5e-16 Score=126.26 Aligned_cols=124 Identities=23% Similarity=0.344 Sum_probs=97.5
Q ss_pred HHhhhcCCCcEEEEccC-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccc
Q 047371 52 LQSLIKGGELFLDYGTG-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 52 l~~~~~~~~~vLD~G~G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
+...++++.+|||+||| +|.++..+++....+|+|+|+++.+++.|++++..+++ ++++...|...+.
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~-------- 117 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS---NVRLVKSNGGIIK-------- 117 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEEECSSCSST--------
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC---CcEEEeCCchhhh--------
Confidence 34556789999999999 99999999887347999999999999999999988876 6778887753321
Q ss_pred cchhccccccccCCCCCCCeeEEEecccccc----------------------HHHHHHHHHHcccCCeEEEEecC-CCC
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILLNP----------------------LPQLADHIVSYAKPGAVVGISGI-LSE 187 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~-~~~ 187 (222)
++ +.++||+|++|+|+.+ +..+++.+.++|||||.+++... ...
T Consensus 118 ~~-------------~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 184 (230)
T 3evz_A 118 GV-------------VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEK 184 (230)
T ss_dssp TT-------------CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHH
T ss_pred hc-------------ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHh
Confidence 11 4578999999998754 36689999999999999998533 234
Q ss_pred cHHHHHHHHHhh
Q 047371 188 QLPRIINRYSEF 199 (222)
Q Consensus 188 ~~~~~~~~~~~~ 199 (222)
...++.+.+.+.
T Consensus 185 ~~~~~~~~l~~~ 196 (230)
T 3evz_A 185 LLNVIKERGIKL 196 (230)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 566777777664
No 9
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=8.2e-16 Score=122.73 Aligned_cols=118 Identities=14% Similarity=0.154 Sum_probs=99.0
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++..+++. +++.+...|......
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~~------------ 118 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLS-PRMRAVQGTAPAALA------------ 118 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCTTGGGT------------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEeCchhhhcc------------
Confidence 467889999999999999999988 579999999999999999999888875 378888888755211
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
...+||+|+++.... .. +++.+.+.|||||.+++.....++..++.+.+.+.
T Consensus 119 ----------~~~~~D~v~~~~~~~-~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 119 ----------DLPLPEAVFIGGGGS-QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp ----------TSCCCSEEEECSCCC-HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred ----------cCCCCCEEEECCccc-HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 345799999988664 45 99999999999999999887777788887777765
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.70 E-value=4.3e-16 Score=124.00 Aligned_cols=101 Identities=21% Similarity=0.214 Sum_probs=87.3
Q ss_pred CcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccc
Q 047371 60 ELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSH 139 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (222)
.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++...++. .++.+...+...+..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~---------------- 107 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN-DRIQIVQGDVHNIPI---------------- 107 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECBTTBCSS----------------
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc-CceEEEEcCHHHCCC----------------
Confidence 399999999999999998875579999999999999999999888775 478898888766532
Q ss_pred cccCCCCCCCeeEEEeccccccH---HHHHHHHHHcccCCeEEEEec
Q 047371 140 EIRGISETEEYDVVIANILLNPL---PQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 140 ~~~~~~~~~~~D~v~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.++++. ..+++++.++|||||.+++.+
T Consensus 108 ------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 108 ------EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp ------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 56789999999888764 678999999999999999864
No 11
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=3.2e-16 Score=122.37 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=92.2
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccc
Q 047371 44 TTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTA 123 (222)
Q Consensus 44 ~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~ 123 (222)
.......++...++++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++..+++. ++++...+...+.
T Consensus 8 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~~~~~l~- 83 (185)
T 3mti_A 8 PIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIE--NTELILDGHENLD- 83 (185)
T ss_dssp HHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCC--CEEEEESCGGGGG-
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEeCcHHHHH-
Confidence 455666777777888999999999999999999988 579999999999999999999888874 7888775544321
Q ss_pred ccccccccchhccccccccCCCCCCCeeEEEecccccc------------HHHHHHHHHHcccCCeEEEEecCC
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP------------LPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~------------~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
. + ..++||+|++++++.+ ....++++.+.|||||.+++..+.
T Consensus 84 -------~------------~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 84 -------H------------Y-VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp -------G------------T-CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred -------h------------h-ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 0 1 4668999999854321 235689999999999999986543
No 12
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.69 E-value=2.3e-15 Score=125.24 Aligned_cols=150 Identities=14% Similarity=0.146 Sum_probs=110.8
Q ss_pred eeEEeCCCcccccCCcchhHHHHHHHHhhh-cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 27 TNIILNPGLAFGTGEHATTKLCLLLLQSLI-KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~-~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
..+.++|+... ..+.+..+.+.+...+ .++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.|++++..+
T Consensus 80 ~~~~~~~~~~i---pr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~ 156 (276)
T 2b3t_A 80 LPLFVSPATLI---PRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL 156 (276)
T ss_dssp EEEECCTTSCC---CCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCcc---cCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 34556665433 2333444444444443 56789999999999999998864 5679999999999999999999888
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-----------------------
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP----------------------- 161 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------------- 161 (222)
++. ++.+...|..... +.++||+|++|+|+..
T Consensus 157 ~~~--~v~~~~~d~~~~~-----------------------~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~ 211 (276)
T 2b3t_A 157 AIK--NIHILQSDWFSAL-----------------------AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAAD 211 (276)
T ss_dssp TCC--SEEEECCSTTGGG-----------------------TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHH
T ss_pred CCC--ceEEEEcchhhhc-----------------------ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCC
Confidence 875 6888887764321 3568999999988742
Q ss_pred -----HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhccee
Q 047371 162 -----LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDILV 205 (222)
Q Consensus 162 -----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 205 (222)
+..+++.+.++|||||.+++. ....+..++.+.+... |..++.
T Consensus 212 ~g~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 212 SGMADIVHIIEQSRNALVSGGFLLLE-HGWQQGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEE-CCSSCHHHHHHHHHHTTCTTCCE
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEEE-ECchHHHHHHHHHHHCCCcEEEE
Confidence 356789999999999999986 4556677777777664 655543
No 13
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.69 E-value=1.1e-15 Score=128.14 Aligned_cols=144 Identities=19% Similarity=0.299 Sum_probs=106.6
Q ss_pred eeEEeCCCcccccCCcchhHHHHHHHHhhh--cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 27 TNIILNPGLAFGTGEHATTKLCLLLLQSLI--KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~--~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
..+.++|+... ..+.+..+.+.+...+ .++.+|||+|||+|.+++.+++.+..+++|+|+|+.+++.|++++..+
T Consensus 93 ~~~~v~~~~li---pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~ 169 (284)
T 1nv8_A 93 LSFLVEEGVFV---PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH 169 (284)
T ss_dssp EEEECCTTSCC---CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT
T ss_pred eEEEeCCCcee---cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 55667776543 2333333433333332 367899999999999999988775679999999999999999999988
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCe---eEEEeccccccHH------------------
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEY---DVVIANILLNPLP------------------ 163 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---D~v~~~~~~~~~~------------------ 163 (222)
++. .++.+...|.... ..++| |+|++|+|+....
T Consensus 170 ~l~-~~v~~~~~D~~~~------------------------~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~ 224 (284)
T 1nv8_A 170 GVS-DRFFVRKGEFLEP------------------------FKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGG 224 (284)
T ss_dssp TCT-TSEEEEESSTTGG------------------------GGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCT
T ss_pred CCC-CceEEEECcchhh------------------------cccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCC
Confidence 876 3588988877542 11357 9999999875321
Q ss_pred ----HHHHHHH-HcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 164 ----QLADHIV-SYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 164 ----~~l~~~~-~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
.+++.+. +.++|||.+++. +...+..++.+.+...
T Consensus 225 ~dgl~~~~~i~~~~l~pgG~l~~e-~~~~q~~~v~~~~~~~ 264 (284)
T 1nv8_A 225 EDGLDFYREFFGRYDTSGKIVLME-IGEDQVEELKKIVSDT 264 (284)
T ss_dssp TTSCHHHHHHHHHCCCTTCEEEEE-CCTTCHHHHTTTSTTC
T ss_pred CcHHHHHHHHHHhcCCCCCEEEEE-ECchHHHHHHHHHHhC
Confidence 5789999 999999999985 5666666766665544
No 14
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.68 E-value=8e-16 Score=128.51 Aligned_cols=146 Identities=18% Similarity=0.246 Sum_probs=109.3
Q ss_pred ceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcC
Q 047371 26 ATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNN 105 (222)
Q Consensus 26 ~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~ 105 (222)
...+.+++... +.++........+...++++.+|||+|||+|.+++.+++.+..+|+|+|+++.+++.|++++..++
T Consensus 96 g~~f~~d~~~~---~f~~~~~~~~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~ 172 (278)
T 2frn_A 96 GIKYKLDVAKI---MFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNK 172 (278)
T ss_dssp TEEEEEETTTS---CCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEEccce---eEcCCcHHHHHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 44555554432 123333334445555677899999999999999999998865589999999999999999999988
Q ss_pred CCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 106 IGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 106 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
+. .++++...|...+. ..++||+|+++++.. ...+++.+.++|||||.+++.+..
T Consensus 173 ~~-~~v~~~~~D~~~~~-----------------------~~~~fD~Vi~~~p~~-~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 173 VE-DRMSAYNMDNRDFP-----------------------GENIADRILMGYVVR-THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CT-TTEEEECSCTTTCC-----------------------CCSCEEEEEECCCSS-GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CC-ceEEEEECCHHHhc-----------------------ccCCccEEEECCchh-HHHHHHHHHHHCCCCeEEEEEEee
Confidence 86 35888888876552 356899999998865 467889999999999999985443
Q ss_pred ------CCcHHHHHHHHHhh
Q 047371 186 ------SEQLPRIINRYSEF 199 (222)
Q Consensus 186 ------~~~~~~~~~~~~~~ 199 (222)
.....++.+.+...
T Consensus 228 ~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 228 PEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp EGGGTTTTTHHHHHHHHHHT
T ss_pred ccccccccHHHHHHHHHHHc
Confidence 34455666655553
No 15
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.68 E-value=8.9e-16 Score=131.46 Aligned_cols=156 Identities=15% Similarity=0.104 Sum_probs=115.7
Q ss_pred CcceeEEeCCCcccccCCcchhHHHHHHHHhhhc---CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHH
Q 047371 24 VQATNIILNPGLAFGTGEHATTKLCLLLLQSLIK---GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQN 100 (222)
Q Consensus 24 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~---~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~ 100 (222)
+....+.+++...+.+|.++.++....++...+. ++.+|||+|||+|.+++.+++.+. +|+++|+|+.+++.|+++
T Consensus 116 e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n 194 (332)
T 2igt_A 116 LLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKEN 194 (332)
T ss_dssp ETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHH
T ss_pred ECCEEEEEecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHH
Confidence 3456788888887778888877766666666553 578999999999999999998865 999999999999999999
Q ss_pred HHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------------HHHHHH
Q 047371 101 AALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------------LPQLAD 167 (222)
Q Consensus 101 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------------~~~~l~ 167 (222)
+..+++...++.+...|...+.. .. ....++||+|++|+|... +..++.
T Consensus 195 ~~~~gl~~~~v~~i~~D~~~~l~-------~~-----------~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~ 256 (332)
T 2igt_A 195 QVLAGLEQAPIRWICEDAMKFIQ-------RE-----------ERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLD 256 (332)
T ss_dssp HHHHTCTTSCEEEECSCHHHHHH-------HH-----------HHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHH
T ss_pred HHHcCCCccceEEEECcHHHHHH-------HH-----------HhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHH
Confidence 99888763348888877654311 00 001467999999998422 457899
Q ss_pred HHHHcccCCeEEEEecCC--CCcHHHHHHHHHh
Q 047371 168 HIVSYAKPGAVVGISGIL--SEQLPRIINRYSE 198 (222)
Q Consensus 168 ~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~ 198 (222)
.+.++|||||.+++.+.. ......+.+.+.+
T Consensus 257 ~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~ 289 (332)
T 2igt_A 257 ICREILSPKALGLVLTAYSIRASFYSMHELMRE 289 (332)
T ss_dssp HHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHH
Confidence 999999999997774332 3344555555553
No 16
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=1e-15 Score=126.30 Aligned_cols=120 Identities=21% Similarity=0.231 Sum_probs=97.9
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|++++..+++. .++.+...|...+.. .
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~~v~~~~~D~~~~~~-------~------ 114 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLE-DQIEIIEYDLKKITD-------L------ 114 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCT-TTEEEECSCGGGGGG-------T------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCc-ccEEEEECcHHHhhh-------h------
Confidence 68899999999999999999876569999999999999999999988886 478898888765421 0
Q ss_pred cccccCCCCCCCeeEEEeccccccH-----------------------HHHHHHHHHcccCCeEEEEecCCCCcHHHHHH
Q 047371 138 SHEIRGISETEEYDVVIANILLNPL-----------------------PQLADHIVSYAKPGAVVGISGILSEQLPRIIN 194 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~~-----------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 194 (222)
.+.++||+|++|+|+... ..+++.+.++|||||.+++. .......++..
T Consensus 115 -------~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~ 186 (259)
T 3lpm_A 115 -------IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV-HRPERLLDIID 186 (259)
T ss_dssp -------SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE-ECTTTHHHHHH
T ss_pred -------hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE-EcHHHHHHHHH
Confidence 146789999999997432 45899999999999999995 45667777777
Q ss_pred HHHhh
Q 047371 195 RYSEF 199 (222)
Q Consensus 195 ~~~~~ 199 (222)
.+...
T Consensus 187 ~l~~~ 191 (259)
T 3lpm_A 187 IMRKY 191 (259)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 77764
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=1.7e-15 Score=121.12 Aligned_cols=140 Identities=15% Similarity=0.124 Sum_probs=110.0
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++. ++.+...+...+..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~~---------- 102 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK--NVEVLKSEENKIPL---------- 102 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT--TEEEEECBTTBCSS----------
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEecccccCCC----------
Confidence 457889999999999999988875 3569999999999999999999888775 78888888765432
Q ss_pred hccccccccCCCCCCCeeEEEeccccccH---HHHHHHHHHcccCCeEEEEecCC------------CCcHHHHHHHHHh
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPL---PQLADHIVSYAKPGAVVGISGIL------------SEQLPRIINRYSE 198 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~------------~~~~~~~~~~~~~ 198 (222)
+.++||+|+++..+++. ..+++++.++|||||.+++.++. .....++.+.+++
T Consensus 103 ------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 103 ------------PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp ------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHH
T ss_pred ------------CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHH
Confidence 56789999998888764 67899999999999999996432 2245777777776
Q ss_pred h-hhcceecc-cCCceEeecccC
Q 047371 199 F-LEDILVSE-KDDWRCVSGTKF 219 (222)
Q Consensus 199 ~-~~~~~~~~-~~~w~~~~~~k~ 219 (222)
. |..+.... .+.|..+..+|.
T Consensus 171 ~Gf~~~~~~~~~~~~~~~~~~k~ 193 (219)
T 3dh0_A 171 AGIRVGRVVEVGKYCFGVYAMIV 193 (219)
T ss_dssp TTCEEEEEEEETTTEEEEEEECC
T ss_pred CCCEEEEEEeeCCceEEEEEEec
Confidence 5 76665443 456666666664
No 18
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=1.4e-15 Score=119.97 Aligned_cols=117 Identities=14% Similarity=0.131 Sum_probs=93.0
Q ss_pred HHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccc
Q 047371 46 KLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTA 123 (222)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~ 123 (222)
.....++...++++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++..+++. .++.+...|...+..
T Consensus 10 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~ 88 (197)
T 3eey_A 10 GQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI-DRVTLIKDGHQNMDK 88 (197)
T ss_dssp HHHHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG-GGEEEECSCGGGGGG
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEEECCHHHHhh
Confidence 3344445555778999999999999999998876 4569999999999999999999888764 478888888655421
Q ss_pred ccccccccchhccccccccCCCCCCCeeEEEecccccc------------HHHHHHHHHHcccCCeEEEEecC
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP------------LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~------------~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ..++||+|++++++.+ ...+++.+.++|||||.+++..+
T Consensus 89 --------~-------------~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 89 --------Y-------------IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp --------T-------------CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --------h-------------ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 0 3578999999987621 34689999999999999998754
No 19
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.66 E-value=1.8e-15 Score=132.27 Aligned_cols=151 Identities=16% Similarity=0.102 Sum_probs=116.4
Q ss_pred CcceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh
Q 047371 24 VQATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~ 103 (222)
++...+.+++...+.+|.+...+....++..+.++|++|||+|||+|.+++.++..+.. |+++|+|+.+++.|++|+..
T Consensus 180 E~g~~f~vd~~~~~~tG~f~dqr~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ 258 (393)
T 4dmg_A 180 EDGLRFPIPLALAQKTGYYLDQRENRRLFEAMVRPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALR 258 (393)
T ss_dssp ETTEEEEEETTTCCTTSSCGGGHHHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHH
T ss_pred ECCEEEEEechhccccCcCCCHHHHHHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHH
Confidence 34677888888888889998888888888888778999999999999999999988754 99999999999999999999
Q ss_pred cCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc------------cHHHHHHHHHH
Q 047371 104 NNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN------------PLPQLADHIVS 171 (222)
Q Consensus 104 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~------------~~~~~l~~~~~ 171 (222)
+++. . .+...|...+.. . ..+.||+|++++|.. .+..++..+.+
T Consensus 259 ng~~-~--~~~~~D~~~~l~-------------------~--~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~ 314 (393)
T 4dmg_A 259 LGLR-V--DIRHGEALPTLR-------------------G--LEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALR 314 (393)
T ss_dssp HTCC-C--EEEESCHHHHHH-------------------T--CCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHH
T ss_pred hCCC-C--cEEEccHHHHHH-------------------H--hcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8875 2 344555433210 0 123499999999862 24578999999
Q ss_pred cccCCeEEEE-ecCCCCcHHHHHHHHHhh
Q 047371 172 YAKPGAVVGI-SGILSEQLPRIINRYSEF 199 (222)
Q Consensus 172 ~LkpgG~l~~-~~~~~~~~~~~~~~~~~~ 199 (222)
+|||||.+++ ++........+.+.+...
T Consensus 315 ~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a 343 (393)
T 4dmg_A 315 LLAEEGFLWLSSCSYHLRLEDLLEVARRA 343 (393)
T ss_dssp TEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred hcCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999985 555555555555555443
No 20
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.66 E-value=1.3e-15 Score=128.42 Aligned_cols=146 Identities=21% Similarity=0.183 Sum_probs=112.2
Q ss_pred HHHHhhhcCCCcEEEEccCCCHHHHHHH--HhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc
Q 047371 50 LLLQSLIKGGELFLDYGTGSGILGIAAI--KFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 50 ~~l~~~~~~~~~vLD~G~G~G~~~~~la--~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 127 (222)
..+...++++.+|||+|||+|.++..++ ..+..+++|+|+++.+++.|++++...++. .++++...|...+..
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~---- 184 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA-GQITLHRQDAWKLDT---- 184 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEEECCGGGCCC----
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECchhcCCc----
Confidence 3444446789999999999999999884 445679999999999999999999887765 468899888765532
Q ss_pred ccccchhccccccccCCCCCCCeeEEEeccccccH------HHHHHHHHHcccCCeEEEEecCCC---------------
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL------PQLADHIVSYAKPGAVVGISGILS--------------- 186 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~------~~~l~~~~~~LkpgG~l~~~~~~~--------------- 186 (222)
+ ++||+|+++.++++. ..+++++.+.|||||++++.++..
T Consensus 185 ------------------~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~ 245 (305)
T 3ocj_A 185 ------------------R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAI 245 (305)
T ss_dssp ------------------C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGS
T ss_pred ------------------c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeecc
Confidence 3 789999998887652 237999999999999999865321
Q ss_pred -----------------------CcHHHHHHHHHhh-hhcceec--ccCCceEeecccC
Q 047371 187 -----------------------EQLPRIINRYSEF-LEDILVS--EKDDWRCVSGTKF 219 (222)
Q Consensus 187 -----------------------~~~~~~~~~~~~~-~~~~~~~--~~~~w~~~~~~k~ 219 (222)
....++.+.++.. |..+... ..+.|.++.++|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 246 DPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp CHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred ccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 2456677777665 6665554 5667777777764
No 21
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.66 E-value=7.7e-16 Score=127.13 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=91.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++...++. .++.+...|...+..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~------------ 110 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ-NRVTGIVGSMDDLPF------------ 110 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCC------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC-cCcEEEEcChhhCCC------------
Confidence 3578999999999999999999887679999999999999999999888875 479999988866532
Q ss_pred cccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++.++++ ...+++++.++|||||.+++.+.
T Consensus 111 ----------~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 111 ----------RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp ----------CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ----------CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 5678999999988776 46689999999999999998643
No 22
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.66 E-value=1.4e-15 Score=120.99 Aligned_cols=110 Identities=18% Similarity=0.201 Sum_probs=86.3
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++..+++...++++...|...+.. .
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~-------~------ 119 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK-------Q------ 119 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT-------S------
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH-------h------
Confidence 688999999999999998777766799999999999999999998888731378888877644311 0
Q ss_pred cccccCCCCCCC-eeEEEeccccc--cHHHHHHHH--HHcccCCeEEEEecCCCC
Q 047371 138 SHEIRGISETEE-YDVVIANILLN--PLPQLADHI--VSYAKPGAVVGISGILSE 187 (222)
Q Consensus 138 ~~~~~~~~~~~~-~D~v~~~~~~~--~~~~~l~~~--~~~LkpgG~l~~~~~~~~ 187 (222)
...++ ||+|+++++++ ....+++.+ .++|||||.+++++....
T Consensus 120 -------~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 120 -------PQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp -------CCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred -------hccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 02467 99999999854 255677878 668999999999754433
No 23
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.66 E-value=4e-16 Score=121.03 Aligned_cols=110 Identities=16% Similarity=0.141 Sum_probs=86.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++...++. .++.+...|...+.. .
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~--------~---- 96 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE-NRFTLLKMEAERAID--------C---- 96 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG-GGEEEECSCHHHHHH--------H----
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEEECcHHHhHH--------h----
Confidence 367899999999999999998887679999999999999999999887764 368888777644210 0
Q ss_pred ccccccCCCCCCCeeEEEeccccc--cHHHHHHHHH--HcccCCeEEEEecCCCCc
Q 047371 137 SSHEIRGISETEEYDVVIANILLN--PLPQLADHIV--SYAKPGAVVGISGILSEQ 188 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~--~~LkpgG~l~~~~~~~~~ 188 (222)
..++||+|+++++++ ...+.++.+. ++|||||.+++.+.....
T Consensus 97 ---------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 97 ---------LTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp ---------BCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred ---------hcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 235699999999874 3455677776 999999999997554443
No 24
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.65 E-value=1e-15 Score=127.82 Aligned_cols=134 Identities=18% Similarity=0.263 Sum_probs=106.1
Q ss_pred CCcceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHH
Q 047371 23 DVQATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 23 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~ 102 (222)
..+...+.+++...+......+. ...+...+++|++|||+|||+|.+++.+++.+.++|+++|+|+.+++.+++|+.
T Consensus 93 ~E~G~~~~~D~~k~~f~~~~~~e---r~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~ 169 (278)
T 3k6r_A 93 VENGIKYKLDVAKIMFSPANVKE---RVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp EETTEEEEEETTTSCCCGGGHHH---HHHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHH
T ss_pred EECCEEEEEeccceEEcCCcHHH---HHHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHH
Confidence 34567788888754422222222 234455678999999999999999999999887899999999999999999999
Q ss_pred hcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 103 LNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 103 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
.+++. +++++...|...+. +.+.||.|++|+|... .+++..+.++||+||.+.+.
T Consensus 170 ~N~v~-~~v~~~~~D~~~~~-----------------------~~~~~D~Vi~~~p~~~-~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 170 LNKVE-DRMSAYNMDNRDFP-----------------------GENIADRILMGYVVRT-HEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp HTTCT-TTEEEECSCTTTCC-----------------------CCSCEEEEEECCCSSG-GGGHHHHHHHEEEEEEEEEE
T ss_pred HcCCC-CcEEEEeCcHHHhc-----------------------cccCCCEEEECCCCcH-HHHHHHHHHHcCCCCEEEEE
Confidence 99997 57899888876552 4678999999988653 46788899999999998775
Q ss_pred cC
Q 047371 183 GI 184 (222)
Q Consensus 183 ~~ 184 (222)
++
T Consensus 225 ~~ 226 (278)
T 3k6r_A 225 NT 226 (278)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 25
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.65 E-value=7.1e-16 Score=127.58 Aligned_cols=109 Identities=21% Similarity=0.247 Sum_probs=90.3
Q ss_pred hHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccc
Q 047371 45 TKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (222)
+..+.++|......+.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.|++. .++.+...+++.+..
T Consensus 26 p~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a~~~--------~~v~~~~~~~e~~~~- 95 (257)
T 4hg2_A 26 PRALFRWLGEVAPARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQALRH--------PRVTYAVAPAEDTGL- 95 (257)
T ss_dssp CHHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTCCCC--------TTEEEEECCTTCCCC-
T ss_pred HHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhhhhc--------CCceeehhhhhhhcc-
Confidence 355667777777777899999999999999999875 6899999999999877532 378898888876643
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEecC
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++++||+|++...+|+ ...+++++.|+|||||.+++.+.
T Consensus 96 ---------------------~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 96 ---------------------PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp ---------------------CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------------------cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 6889999999988876 46689999999999999988544
No 26
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.65 E-value=3.5e-15 Score=125.49 Aligned_cols=104 Identities=12% Similarity=0.120 Sum_probs=89.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.|++++...++. .++.+...|...+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------------- 134 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSP-RRKEVRIQGWEEF------------- 134 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCS-SCEEEEECCGGGC-------------
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECCHHHc-------------
Confidence 467889999999999999999886 6 79999999999999999999888875 4788888776432
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH------------HHHHHHHHHcccCCeEEEEecCCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL------------PQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~------------~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
.++||+|+++.++++. ..+++++.++|||||.+++.++..
T Consensus 135 ------------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 135 ------------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp ------------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred ------------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 5679999999888777 688999999999999999975543
No 27
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.65 E-value=2.2e-15 Score=125.51 Aligned_cols=145 Identities=15% Similarity=0.205 Sum_probs=107.6
Q ss_pred cceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh
Q 047371 25 QATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL 103 (222)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~ 103 (222)
....+.++|...|.........+. +...++++.+|||+|||+|.+++.+++. +..+|+|+|+++.+++.|++++..
T Consensus 89 ~g~~f~~~~~~~f~~~~~~~e~~~---~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~ 165 (272)
T 3a27_A 89 YGCLFKLDVAKIMWSQGNIEERKR---MAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL 165 (272)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHH---HHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH
T ss_pred CCEEEEEechhEEECCCchHHHHH---HHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 345677777765433222222221 2233678899999999999999999987 456999999999999999999999
Q ss_pred cCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 104 NNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 104 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+++. ++.+...|...+ . ..++||+|+++++. ....++..+.+.|||||.+++++
T Consensus 166 n~l~--~~~~~~~d~~~~-~----------------------~~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 166 NKLN--NVIPILADNRDV-E----------------------LKDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp TTCS--SEEEEESCGGGC-C----------------------CTTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCCC--CEEEEECChHHc-C----------------------ccCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEE
Confidence 8875 677888776543 1 24579999999987 46678999999999999999987
Q ss_pred CCC-----CcHHHHHHHHHh
Q 047371 184 ILS-----EQLPRIINRYSE 198 (222)
Q Consensus 184 ~~~-----~~~~~~~~~~~~ 198 (222)
... +...+..+.+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~ 239 (272)
T 3a27_A 220 TVAEKIMYERPIERLKFYAE 239 (272)
T ss_dssp EEEGGGTTTHHHHHHHHHHH
T ss_pred cCccccccccHHHHHHHHHH
Confidence 755 334444445444
No 28
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.65 E-value=2.3e-15 Score=123.19 Aligned_cols=105 Identities=18% Similarity=0.267 Sum_probs=91.0
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++++.+|||+|||+|..+..+++....+++|+|+++.+++.|++++...++. .++.+...|...+..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~------------ 110 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA-DRVKGITGSMDNLPF------------ 110 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCSS------------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC-CceEEEECChhhCCC------------
Confidence 4578899999999999999999875569999999999999999999888876 468999988865532
Q ss_pred cccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.++++ ...+++++.++|||||++++.+
T Consensus 111 ----------~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 111 ----------QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp ----------CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----------CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5678999999988876 5678999999999999999965
No 29
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.65 E-value=3.2e-15 Score=116.34 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=104.8
Q ss_pred chhHHHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 43 ATTKLCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 43 ~~~~~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
++...+...+... ..++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++..+++. .++.+...+...
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~ 93 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLG-DNVTLMEGDAPE 93 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCC-TTEEEEESCHHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCC-cceEEEecCHHH
Confidence 3334444444333 4578899999999999999998876 89999999999999999999887763 377787776543
Q ss_pred cccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 121 FTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
.. ...++||+|+++.++++...+++.+.++|+|||.+++.........++.+.+.+.
T Consensus 94 ~~----------------------~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 94 AL----------------------CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDL 150 (192)
T ss_dssp HH----------------------TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHT
T ss_pred hc----------------------ccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHC
Confidence 10 0225799999999888889999999999999999999877667777777777765
No 30
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.65 E-value=2.7e-15 Score=131.25 Aligned_cols=142 Identities=14% Similarity=0.134 Sum_probs=112.3
Q ss_pred cceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 25 QATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
....+.+++...+.+|.+...+....++..+ .++.+|||+|||+|.+++.+++.+..+|+|+|+++.+++.|++++..+
T Consensus 188 ~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n 266 (396)
T 3c0k_A 188 HGMKLLVDIQHGHKTGYYLDQRDSRLATRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN 266 (396)
T ss_dssp TTEEEEECTTTSSTTSSCGGGHHHHHHHHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEeccccccCCcCcCHHHHHHHHHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 4567788888767777777666666666665 578999999999999999999887779999999999999999999988
Q ss_pred CC-CCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccc------------ccHHHHHHHHHH
Q 047371 105 NI-GPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILL------------NPLPQLADHIVS 171 (222)
Q Consensus 105 ~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~------------~~~~~~l~~~~~ 171 (222)
++ . .++++...|...+.. .. .....+||+|++++|. ..+..++..+.+
T Consensus 267 gl~~-~~v~~~~~D~~~~~~-------~~-----------~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~ 327 (396)
T 3c0k_A 267 KLDL-SKAEFVRDDVFKLLR-------TY-----------RDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQ 327 (396)
T ss_dssp TCCG-GGEEEEESCHHHHHH-------HH-----------HHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHH
T ss_pred CCCc-cceEEEECCHHHHHH-------HH-----------HhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHH
Confidence 87 4 378888887654311 00 0024679999999987 446788999999
Q ss_pred cccCCeEEEEecCCC
Q 047371 172 YAKPGAVVGISGILS 186 (222)
Q Consensus 172 ~LkpgG~l~~~~~~~ 186 (222)
.|+|||.+++++...
T Consensus 328 ~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 328 LLNEGGILLTFSCSG 342 (396)
T ss_dssp TEEEEEEEEEEECCT
T ss_pred hcCCCcEEEEEeCCC
Confidence 999999999975543
No 31
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=2.4e-16 Score=125.08 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=89.5
Q ss_pred chhHHHHHHHHhhh---cCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC
Q 047371 43 ATTKLCLLLLQSLI---KGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD 118 (222)
Q Consensus 43 ~~~~~~~~~l~~~~---~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~ 118 (222)
+.+..+.+.+...+ .++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.|++++..++. ++++...|.
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~ 88 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA---VVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------CCHHHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC---ceEEEEcch
Confidence 33444444444443 578899999999999999998863 46999999999999999998876654 455555554
Q ss_pred cccccccccccccchhccccccccCCCCCCCeeEEEeccccccH-----------------------------HHHHHHH
Q 047371 119 RTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-----------------------------PQLADHI 169 (222)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----------------------------~~~l~~~ 169 (222)
..... .. ....++||+|++|+|+... ..+++.+
T Consensus 89 ~~~~~-------~~-----------~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (215)
T 4dzr_A 89 IEWLI-------ER-----------AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALP 150 (215)
T ss_dssp HHHHH-------HH-----------HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCC
T ss_pred Hhhhh-------hh-----------hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHH
Confidence 32100 00 0023789999999987531 5678889
Q ss_pred HHcccCCeEEEEecCCCCcHHHHHHHHH--hh-hhcceec--ccCCceEeecccC
Q 047371 170 VSYAKPGAVVGISGILSEQLPRIINRYS--EF-LEDILVS--EKDDWRCVSGTKF 219 (222)
Q Consensus 170 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~--~~~~w~~~~~~k~ 219 (222)
.++|||||++++......+...+.+.+. .. |..++.. ..+..+.+..+|+
T Consensus 151 ~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 151 PYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp GGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEEC
T ss_pred HHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEc
Confidence 9999999995554456677778877777 43 4443332 2333345554443
No 32
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.65 E-value=5.3e-15 Score=128.64 Aligned_cols=163 Identities=14% Similarity=0.153 Sum_probs=111.2
Q ss_pred eeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcC
Q 047371 27 TNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNN 105 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~ 105 (222)
..+...|+.....+....++++.+.+. ..++.+|||+|||+|.+++.+++. +..+|+|+|+++.+++.|++++..++
T Consensus 193 ~~~~~~pg~Fs~~~~d~~~~~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ng 270 (375)
T 4dcm_A 193 WTIHNHANVFSRTGLDIGARFFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 270 (375)
T ss_dssp EEEEECTTCTTCSSCCHHHHHHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC
T ss_pred eEEEeCCCcccCCcccHHHHHHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcC
Confidence 445555555444444445555544432 234689999999999999999886 36799999999999999999998887
Q ss_pred CCC-CceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc--------HHHHHHHHHHcccCC
Q 047371 106 IGP-KKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------LPQLADHIVSYAKPG 176 (222)
Q Consensus 106 ~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------~~~~l~~~~~~Lkpg 176 (222)
+.. .++.+...|..... +.++||+|++|++++. ...+++.+.+.||||
T Consensus 271 l~~~~~v~~~~~D~~~~~-----------------------~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 271 PEALDRCEFMINNALSGV-----------------------EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp GGGGGGEEEEECSTTTTC-----------------------CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE
T ss_pred CCcCceEEEEechhhccC-----------------------CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC
Confidence 641 24667777664321 5678999999999874 235799999999999
Q ss_pred eEEEEecCCCCcHHHHHHHHHhhhhcce-ecccCCceEeecc
Q 047371 177 AVVGISGILSEQLPRIINRYSEFLEDIL-VSEKDDWRCVSGT 217 (222)
Q Consensus 177 G~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~~ 217 (222)
|.+++.+....... ..+.+.|...+ ....+++..+...
T Consensus 328 G~l~iv~n~~~~~~---~~l~~~fg~~~~~a~~~~F~V~~~~ 366 (375)
T 4dcm_A 328 GELYIVANRHLDYF---HKLKKIFGNCTTIATNNKFVVLKAV 366 (375)
T ss_dssp EEEEEEEETTSCHH---HHHHHHHSCCEEEEECSSEEEEEEE
T ss_pred cEEEEEEECCcCHH---HHHHHhcCCEEEEeeCCCEEEEEEc
Confidence 99999754433332 33344444443 3345556555443
No 33
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.64 E-value=2.7e-15 Score=131.24 Aligned_cols=152 Identities=20% Similarity=0.224 Sum_probs=112.7
Q ss_pred cceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 25 QATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
....+.+++ ..+.+|.+...+....++....+++++|||+|||+|.+++.++..+..+|+|+|+++.+++.|++++..+
T Consensus 185 ~g~~~~~~~-~~~~tg~f~~~~~~~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n 263 (396)
T 2as0_A 185 GRAKFIVDM-RGQKTGFFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLN 263 (396)
T ss_dssp TTEEEEEES-SSSSSCCCSTTHHHHHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEec-cccccCccCCHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 346677777 5555566666666666776666578999999999999999999887779999999999999999999988
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc------------cHHHHHHHHHHc
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN------------PLPQLADHIVSY 172 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~------------~~~~~l~~~~~~ 172 (222)
++. .++.+...|...+... + ....++||+|++++|.. .+..++..+.++
T Consensus 264 ~~~-~~v~~~~~d~~~~~~~-------~-----------~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (396)
T 2as0_A 264 GVE-DRMKFIVGSAFEEMEK-------L-----------QKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNL 324 (396)
T ss_dssp TCG-GGEEEEESCHHHHHHH-------H-----------HHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTT
T ss_pred CCC-ccceEEECCHHHHHHH-------H-----------HhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 875 3788888876443110 0 00256899999999873 356688999999
Q ss_pred ccCCeEEEEecC-CCCcHHHHHHHH
Q 047371 173 AKPGAVVGISGI-LSEQLPRIINRY 196 (222)
Q Consensus 173 LkpgG~l~~~~~-~~~~~~~~~~~~ 196 (222)
|+|||.+++++. .......+.+.+
T Consensus 325 LkpgG~lv~~~~~~~~~~~~~~~~v 349 (396)
T 2as0_A 325 VKDGGILVTCSCSQHVDLQMFKDMI 349 (396)
T ss_dssp EEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred cCCCcEEEEEECCCCCCHHHHHHHH
Confidence 999998887543 333333344433
No 34
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.64 E-value=3.4e-15 Score=115.37 Aligned_cols=120 Identities=17% Similarity=0.103 Sum_probs=95.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++. .++ +...+...... .
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~-~~~~d~~~~~~--------~-- 90 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS-DRI-AVQQGAPRAFD--------D-- 90 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT-TSE-EEECCTTGGGG--------G--
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC-CCE-EEecchHhhhh--------c--
Confidence 457889999999999999998876 5689999999999999999999887765 366 65555422100 0
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
..++||+|+++.++++ ..+++.+.+.|||||.+++..........+.+.+...
T Consensus 91 -----------~~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 91 -----------VPDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQF 143 (178)
T ss_dssp -----------CCSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred -----------cCCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHc
Confidence 2278999999998877 7799999999999999999877777777777776665
No 35
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.64 E-value=4e-15 Score=129.83 Aligned_cols=156 Identities=12% Similarity=0.042 Sum_probs=113.4
Q ss_pred cceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 25 QATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
....+.+++.....++....++....++...+.++++|||+|||+|.+++.+++.+..+|+|+|+++.+++.|++|+..+
T Consensus 179 ~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n 258 (385)
T 2b78_A 179 NGISYNVFLNDGLMTGIFLDQRQVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEAN 258 (385)
T ss_dssp TTEEEEECSSSSSCCSSCGGGHHHHHHHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHT
T ss_pred CCEEEEEeccccccCCcCCcHHHHHHHHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 45778888875555555555555555555554678999999999999999999877679999999999999999999999
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc------------HHHHHHHHHHc
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP------------LPQLADHIVSY 172 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~------------~~~~l~~~~~~ 172 (222)
++...++.+...|+..+.. .. .....+||+|+++||... +.+++..+.+.
T Consensus 259 ~~~~~~v~~~~~D~~~~l~-------~~-----------~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~ 320 (385)
T 2b78_A 259 HLDMANHQLVVMDVFDYFK-------YA-----------RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEI 320 (385)
T ss_dssp TCCCTTEEEEESCHHHHHH-------HH-----------HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHT
T ss_pred CCCccceEEEECCHHHHHH-------HH-----------HHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHh
Confidence 8852278888887654310 00 002457999999998731 34577888999
Q ss_pred ccCCeEEEEecCCCC-cHHHHHHHHHh
Q 047371 173 AKPGAVVGISGILSE-QLPRIINRYSE 198 (222)
Q Consensus 173 LkpgG~l~~~~~~~~-~~~~~~~~~~~ 198 (222)
|+|||.+++++.... ..+.+.+.+..
T Consensus 321 L~pgG~l~~~~~~~~~~~~~~~~~i~~ 347 (385)
T 2b78_A 321 LSENGLIIASTNAANMTVSQFKKQIEK 347 (385)
T ss_dssp EEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred cCCCcEEEEEeCCCcCCHHHHHHHHHH
Confidence 999999999765443 23444444443
No 36
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=6.7e-15 Score=117.78 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=95.1
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++..+++. ++.+...+...+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~~------------ 105 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVP--NIKLLWVDGSDLTD------------ 105 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCS--SEEEEECCSSCGGG------------
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCC--CEEEEeCCHHHHHh------------
Confidence 45789999999999999998876 4579999999999999999999888874 88898888765420
Q ss_pred cccccccCCCCCCCeeEEEecccccc-----------HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP-----------LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
..+.++||+|+++.+..+ ...+++.+.++|||||.+++.+........+.+.+.+.
T Consensus 106 --------~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 172 (214)
T 1yzh_A 106 --------YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQY 172 (214)
T ss_dssp --------TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred --------hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHC
Confidence 014668999999877532 25799999999999999999754444455555555543
No 37
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.64 E-value=1.6e-15 Score=116.41 Aligned_cols=110 Identities=20% Similarity=0.266 Sum_probs=84.4
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.|++++..+++ ++++...|...... ..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~-------~~----- 104 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL---GARVVALPVEVFLP-------EA----- 104 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC---CCEEECSCHHHHHH-------HH-----
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC---ceEEEeccHHHHHH-------hh-----
Confidence 788999999999999999998864 499999999999999999987765 56777776544210 00
Q ss_pred cccccCCCCCCCeeEEEecccc-ccHHHHHHHHH--HcccCCeEEEEecCCCCcH
Q 047371 138 SHEIRGISETEEYDVVIANILL-NPLPQLADHIV--SYAKPGAVVGISGILSEQL 189 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~-~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~~ 189 (222)
. ...++||+|++++++ ....+.++.+. ++|||||.+++.+......
T Consensus 105 ----~--~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 105 ----K--AQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp ----H--HTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred ----h--ccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 0 023479999999887 34556777777 9999999999976554443
No 38
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.64 E-value=6.8e-15 Score=113.77 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=102.8
Q ss_pred cchhHHHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCc
Q 047371 42 HATTKLCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR 119 (222)
Q Consensus 42 ~~~~~~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~ 119 (222)
.+....+...+... ..++.+|||+|||+|.++..+++ +..+++|+|+++.+++.|++++..+++. ++.+...+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~d~~ 93 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIK--NCQIIKGRAE 93 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCC--SEEEEESCHH
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEECCcc
Confidence 34444444444443 34678999999999999999988 6689999999999999999999888874 7888877654
Q ss_pred ccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 120 TFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
.. . +.++||+|+++.+ .....+++.+.+. |||.+++.........++.+.+++.
T Consensus 94 ~~-~----------------------~~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 94 DV-L----------------------DKLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESR 147 (183)
T ss_dssp HH-G----------------------GGCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHT
T ss_pred cc-c----------------------cCCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHc
Confidence 31 1 3468999999988 7788899999988 9999999877777777888888775
No 39
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.64 E-value=3.3e-15 Score=122.74 Aligned_cols=103 Identities=19% Similarity=0.233 Sum_probs=87.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|++++...++. ++.+...|...+..
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~l~~------------ 99 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQ--QVEYVQGDAEQMPF------------ 99 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCC-CCCS------------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEecHHhCCC------------
Confidence 3578899999999999999998875 59999999999999999998877764 78888888766532
Q ss_pred cccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
++++||+|+++..+++ ...++.++.++|||||.+++.+
T Consensus 100 ----------~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 100 ----------TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp ----------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 5678999999988776 4578999999999999999864
No 40
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.64 E-value=1.8e-15 Score=117.79 Aligned_cols=127 Identities=17% Similarity=0.161 Sum_probs=94.7
Q ss_pred CcchhHHHHHHHHhhh---cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecC
Q 047371 41 EHATTKLCLLLLQSLI---KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVP 117 (222)
Q Consensus 41 ~~~~~~~~~~~l~~~~---~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~ 117 (222)
..+++..+.+.+...+ .++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++..+++. .++++...|
T Consensus 24 ~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d 102 (187)
T 2fhp_A 24 TRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP-EKFEVRKMD 102 (187)
T ss_dssp SCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESC
T ss_pred cCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC-cceEEEECc
Confidence 4455555555554443 368899999999999999888877679999999999999999999887764 478888887
Q ss_pred CcccccccccccccchhccccccccCCCCCCCeeEEEeccccc--cHHHHHHHH--HHcccCCeEEEEecCCC
Q 047371 118 DRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN--PLPQLADHI--VSYAKPGAVVGISGILS 186 (222)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~--~~~LkpgG~l~~~~~~~ 186 (222)
....... ... ..++||+|+++++++ .....++.+ .++|+|||.+++.....
T Consensus 103 ~~~~~~~-----~~~-------------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 103 ANRALEQ-----FYE-------------EKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHH-----HHH-------------TTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHH-----HHh-------------cCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 6543100 000 256899999999864 245667777 88999999999864443
No 41
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.63 E-value=2.2e-15 Score=119.92 Aligned_cols=132 Identities=17% Similarity=0.149 Sum_probs=93.8
Q ss_pred eeEEeCCCcccccCCcchhHHHHHHHHhhh---cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh
Q 047371 27 TNIILNPGLAFGTGEHATTKLCLLLLQSLI---KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL 103 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~---~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~ 103 (222)
..+...++.. .++++..+.+.+...+ .++.+|||+|||+|.+++.++..+..+|+|+|+++.+++.|++++..
T Consensus 24 ~~l~~~~~~~----~rp~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~ 99 (202)
T 2fpo_A 24 RKLPVPDSPG----LRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLAT 99 (202)
T ss_dssp CEEECCCC----------CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred cEecCCCCCC----CCCCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHH
Confidence 4455544332 3444444444443332 26889999999999999987777667999999999999999999988
Q ss_pred cCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc--cHHHHHHHHHH--cccCCeEE
Q 047371 104 NNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN--PLPQLADHIVS--YAKPGAVV 179 (222)
Q Consensus 104 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~--~LkpgG~l 179 (222)
+++. ++++...|...+.. ...++||+|+++++++ ....+++.+.+ +|+|||.+
T Consensus 100 ~~~~--~v~~~~~D~~~~~~---------------------~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l 156 (202)
T 2fpo_A 100 LKAG--NARVVNSNAMSFLA---------------------QKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALI 156 (202)
T ss_dssp TTCC--SEEEECSCHHHHHS---------------------SCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCC--cEEEEECCHHHHHh---------------------hcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEE
Confidence 8873 78888887644210 0356899999999855 35567777765 59999999
Q ss_pred EEecCC
Q 047371 180 GISGIL 185 (222)
Q Consensus 180 ~~~~~~ 185 (222)
++++..
T Consensus 157 ~i~~~~ 162 (202)
T 2fpo_A 157 YVESEV 162 (202)
T ss_dssp EEEEEG
T ss_pred EEEECC
Confidence 987544
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.63 E-value=1.5e-15 Score=120.99 Aligned_cols=111 Identities=12% Similarity=0.023 Sum_probs=83.4
Q ss_pred HHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcC----------CCCCceeEEec
Q 047371 48 CLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNN----------IGPKKIKLHLV 116 (222)
Q Consensus 48 ~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~----------~~~~~v~~~~~ 116 (222)
+.+++..+ ++++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.|+++..... ....++++...
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQG-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHC-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCC-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 44445444 4578999999999999999999886 489999999999999988754210 00136788888
Q ss_pred CCcccccccccccccchhccccccccCCCCC-CCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEE
Q 047371 117 PDRTFTASMNERVDGVVEYLSSHEIRGISET-EEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~ 181 (222)
|...+.. .+ ++||+|+++..++++ ..++++++++|||||++++
T Consensus 90 d~~~l~~----------------------~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 90 DFFALTA----------------------RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp CCSSSTH----------------------HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred ccccCCc----------------------ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 8765532 22 689999997777653 3478999999999998443
No 43
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.63 E-value=2.5e-15 Score=121.30 Aligned_cols=122 Identities=12% Similarity=0.142 Sum_probs=94.8
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++...++. ++.+...|+..+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~--nv~~~~~Da~~~l------------- 97 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS--NLRVMCHDAVEVL------------- 97 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS--SEEEECSCHHHHH-------------
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC--cEEEEECCHHHHH-------------
Confidence 36789999999999999998875 5578999999999999999999888875 7888888765431
Q ss_pred cccccccCCCCCCCeeEEEeccc--ccc---------HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 136 LSSHEIRGISETEEYDVVIANIL--LNP---------LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~--~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
....+.++||.|+++.+ ... ...+++.+.+.|||||.+++.+......+.+.+.+...
T Consensus 98 ------~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 98 ------HKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSI 166 (218)
T ss_dssp ------HHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred ------HHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 00015788999999833 221 12589999999999999999876655566666666654
No 44
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.63 E-value=5.5e-15 Score=119.74 Aligned_cols=144 Identities=14% Similarity=0.162 Sum_probs=110.8
Q ss_pred HHHHHhhhcCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc
Q 047371 49 LLLLQSLIKGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 49 ~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 127 (222)
++.+..+++++.+|||+|||+|.+++.+++.+ ..+|+|+|+++.+++.|++|+..+++. +++++...|....
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-~~i~~~~~d~l~~------ 78 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK-EKIQVRLANGLAA------ 78 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEEECSGGGG------
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEECchhhh------
Confidence 45667788899999999999999999999874 568999999999999999999999986 4788888876321
Q ss_pred ccccchhccccccccCCCCCCCeeEEEeccc-cccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhccee
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANIL-LNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDILV 205 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 205 (222)
+.+..+||+|++... -..+..+++.....|+++|+++++.. .....+.+.+.+. |.....
T Consensus 79 ----------------l~~~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 79 ----------------FEETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp ----------------CCGGGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHHHTTEEEEEE
T ss_pred ----------------cccCcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHHHCCCEEEEE
Confidence 102226998886433 23367899999999999999999754 5788888888775 655543
Q ss_pred ---cccCCceEeecc
Q 047371 206 ---SEKDDWRCVSGT 217 (222)
Q Consensus 206 ---~~~~~w~~~~~~ 217 (222)
...+.|..+...
T Consensus 141 ~lv~e~~~~Yeii~~ 155 (225)
T 3kr9_A 141 SILEEAGKFYEILVV 155 (225)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred EEEEECCEEEEEEEE
Confidence 345666555443
No 45
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.63 E-value=5.2e-15 Score=120.13 Aligned_cols=144 Identities=13% Similarity=0.144 Sum_probs=110.3
Q ss_pred HHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 48 CLLLLQSLIKGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 48 ~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
-++.+..+++++.+|+|+|||+|.+++.+++.+ ..+|+|+|+++.+++.|++|+..+++. +++++..+|.....
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~-~~I~~~~gD~l~~~---- 85 (230)
T 3lec_A 11 RLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT-SKIDVRLANGLSAF---- 85 (230)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEEECSGGGGC----
T ss_pred HHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECchhhcc----
Confidence 345667888999999999999999999999875 568999999999999999999999986 47999888764431
Q ss_pred cccccchhccccccccCCCCCCCeeEEEe-ccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcce
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIA-NILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDIL 204 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~-~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (222)
.+..+||+|++ +..-+-+.++++.....|+++|+++++.. .....+.+.+.+. |....
T Consensus 86 ------------------~~~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~--~~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 86 ------------------EEADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN--NREDDLRKWLAANDFEIVA 145 (230)
T ss_dssp ------------------CGGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES--SCHHHHHHHHHHTTEEEEE
T ss_pred ------------------ccccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC--CChHHHHHHHHHCCCEEEE
Confidence 12336998764 44444577899999999999999999864 4577888887775 65554
Q ss_pred ec---ccCCceEeec
Q 047371 205 VS---EKDDWRCVSG 216 (222)
Q Consensus 205 ~~---~~~~w~~~~~ 216 (222)
.. ..+.|..+..
T Consensus 146 E~lv~e~~~~Yeii~ 160 (230)
T 3lec_A 146 EDILTENDKRYEILV 160 (230)
T ss_dssp EEEEEC--CEEEEEE
T ss_pred EEEEEECCEEEEEEE
Confidence 33 4555655544
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.62 E-value=6.4e-15 Score=120.44 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=87.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++++.+|||+|||+|.++..+++....+++|+|+++.+++.|++++...++. .++.+...+...+.
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~v~~~~~d~~~~~------------- 99 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS-ERVHFIHNDAAGYV------------- 99 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCCTTCC-------------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEECChHhCC-------------
Confidence 4678999999999999999988764468999999999999999999888775 47889888876542
Q ss_pred cccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
..++||+|++...+++ ...+++++.++|||||.+++.+
T Consensus 100 ----------~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 ----------ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp ----------CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ----------cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 3568999999877765 4678999999999999999853
No 47
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=4.4e-15 Score=122.79 Aligned_cols=129 Identities=15% Similarity=0.142 Sum_probs=97.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh---cCCCCCceeEEecCCccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL---NNIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
..++.+|||+|||+|.+++.+++. +..+++|+|+++.+++.|++++.. +++. +++.+...|...+.... ....
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~-~~v~~~~~D~~~~~~~~--~~~~ 110 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS-ARIEVLEADVTLRAKAR--VEAG 110 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-GGEEEEECCTTCCHHHH--HHTT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-ceEEEEeCCHHHHhhhh--hhhc
Confidence 346789999999999999998876 457999999999999999999887 7765 46888888876541000 0000
Q ss_pred chhccccccccCCCCCCCeeEEEecccccc---------------------HHHHHHHHHHcccCCeEEEEecCCCCcHH
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNP---------------------LPQLADHIVSYAKPGAVVGISGILSEQLP 190 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 190 (222)
+ +.++||+|++|+|+.. +..+++.+.++|||||.+++. .......
T Consensus 111 ~-------------~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~ 176 (260)
T 2ozv_A 111 L-------------PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI-SRPQSVA 176 (260)
T ss_dssp C-------------CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE-ECGGGHH
T ss_pred c-------------CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE-EcHHHHH
Confidence 1 4678999999998754 456799999999999999986 3455677
Q ss_pred HHHHHHHhhhh
Q 047371 191 RIINRYSEFLE 201 (222)
Q Consensus 191 ~~~~~~~~~~~ 201 (222)
++.+.+...|.
T Consensus 177 ~~~~~l~~~~~ 187 (260)
T 2ozv_A 177 EIIAACGSRFG 187 (260)
T ss_dssp HHHHHHTTTEE
T ss_pred HHHHHHHhcCC
Confidence 77777766543
No 48
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.62 E-value=1.1e-14 Score=118.37 Aligned_cols=104 Identities=13% Similarity=0.232 Sum_probs=88.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++...++. ++.+...+...+..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~------------ 83 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVE--NVRFQQGTAESLPF------------ 83 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCC--SEEEEECBTTBCCS------------
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCC--CeEEEecccccCCC------------
Confidence 5678999999999999999998875 59999999999999999998877765 78888887765432
Q ss_pred cccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++++||+|+++..+++ ...++.++.++|||||.+++.+.
T Consensus 84 ----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 84 ----------PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp ----------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 5678999999877765 46789999999999999998644
No 49
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.62 E-value=4.6e-15 Score=127.36 Aligned_cols=132 Identities=14% Similarity=0.171 Sum_probs=96.6
Q ss_pred CCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.|++++..+++. ..+...|....
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~---~~~~~~d~~~~--------------- 257 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE---GEVFASNVFSE--------------- 257 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC---CEEEECSTTTT---------------
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC---CEEEEcccccc---------------
Confidence 56799999999999999998874 358999999999999999999887763 44555554332
Q ss_pred ccccccCCCCCCCeeEEEecccccc--------HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhhhhcce-ecc
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP--------LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLEDIL-VSE 207 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 207 (222)
..++||+|++|+++++ ...+++++.++|||||.+++......... ..+...|...+ ...
T Consensus 258 ---------~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~l~~~f~~~~~~~~ 325 (343)
T 2pjd_A 258 ---------VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP---DVLDETFGFHEVIAQ 325 (343)
T ss_dssp ---------CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHH---HHHHHHHSCCEEEEE
T ss_pred ---------ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcH---HHHHHhcCceEEEee
Confidence 3568999999999874 35689999999999999998644333322 23333333333 345
Q ss_pred cCCceEeecccC
Q 047371 208 KDDWRCVSGTKF 219 (222)
Q Consensus 208 ~~~w~~~~~~k~ 219 (222)
..++..+..+|.
T Consensus 326 ~~gf~v~~~~k~ 337 (343)
T 2pjd_A 326 TGRFKVYRAIMT 337 (343)
T ss_dssp CSSEEEEEEEC-
T ss_pred CCCEEEEEEEeC
Confidence 677777666654
No 50
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.62 E-value=4.7e-15 Score=120.86 Aligned_cols=141 Identities=16% Similarity=0.102 Sum_probs=100.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.|++++..+++. ++++...+...+...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~----------- 135 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE--NTTFCHDRAETFGQR----------- 135 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEEESCHHHHTTC-----------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CEEEEeccHHHhccc-----------
Confidence 46789999999999999998864 5579999999999999999999888875 688888876554210
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC--CCcHHHHHHHHHhh-hhcceec------
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL--SEQLPRIINRYSEF-LEDILVS------ 206 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~~-~~~~~~~------ 206 (222)
....++||+|++.. +..+..+++.+.++|||||.+++..-. .....++.+.+... +......
T Consensus 136 --------~~~~~~fD~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 206 (240)
T 1xdz_A 136 --------KDVRESYDIVTARA-VARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPI 206 (240)
T ss_dssp --------TTTTTCEEEEEEEC-CSCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTT
T ss_pred --------ccccCCccEEEEec-cCCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCC
Confidence 00146899999987 455788999999999999999885321 22233444444443 3332221
Q ss_pred ccCCceEeecccC
Q 047371 207 EKDDWRCVSGTKF 219 (222)
Q Consensus 207 ~~~~w~~~~~~k~ 219 (222)
..+.|..+..+|.
T Consensus 207 ~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 207 EESDRNIMVIRKI 219 (240)
T ss_dssp TCCEEEEEEEEEC
T ss_pred CCCceEEEEEEec
Confidence 1245665655554
No 51
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=9.3e-15 Score=120.69 Aligned_cols=106 Identities=18% Similarity=0.309 Sum_probs=89.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++....+++|+|+++.+++.|++++...++. .++.+...+...+..
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~------------ 125 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA-NRVTFSYADAMDLPF------------ 125 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCS------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEECccccCCC------------
Confidence 3578899999999999999998764579999999999999999999887775 478888888765532
Q ss_pred cccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++++||+|+++.++++ ...+++++.++|||||.+++.++
T Consensus 126 ----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 126 ----------EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp ----------CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ----------CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 5678999999888776 45689999999999999998654
No 52
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.61 E-value=4.4e-15 Score=129.32 Aligned_cols=138 Identities=17% Similarity=0.199 Sum_probs=108.6
Q ss_pred cceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 25 QATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
....+.+++...+.+|.+...+.....+..+ ++.+|||+|||+|.+++.++.. ..+|+|+|+++.+++.|++++..+
T Consensus 178 ~g~~f~i~~~~~~~~g~f~~~~~~~~~~~~~--~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n 254 (382)
T 1wxx_A 178 GRVRYLVDLRAGQKTGAYLDQRENRLYMERF--RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLN 254 (382)
T ss_dssp TTEEEEEECSTTSCCCCCGGGHHHHHHGGGC--CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEEchhcccCccccchHHHHHHHHhc--CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHc
Confidence 3466777887767777777666666666665 7889999999999999999988 679999999999999999999999
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc------------cHHHHHHHHHHc
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN------------PLPQLADHIVSY 172 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~------------~~~~~l~~~~~~ 172 (222)
++. ++.+...|+..+... + ....++||+|++++|.. .+..++..+.++
T Consensus 255 ~~~--~~~~~~~d~~~~~~~-------~-----------~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (382)
T 1wxx_A 255 GLG--NVRVLEANAFDLLRR-------L-----------EKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKL 314 (382)
T ss_dssp TCT--TEEEEESCHHHHHHH-------H-----------HHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHT
T ss_pred CCC--CceEEECCHHHHHHH-------H-----------HhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 886 588888876543210 0 00256899999999872 246689999999
Q ss_pred ccCCeEEEEecCC
Q 047371 173 AKPGAVVGISGIL 185 (222)
Q Consensus 173 LkpgG~l~~~~~~ 185 (222)
|+|||.+++++..
T Consensus 315 LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 315 LKEGGILATASCS 327 (382)
T ss_dssp EEEEEEEEEEECC
T ss_pred cCCCCEEEEEECC
Confidence 9999999987553
No 53
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.61 E-value=1.8e-14 Score=120.00 Aligned_cols=111 Identities=18% Similarity=0.237 Sum_probs=90.3
Q ss_pred HHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccc
Q 047371 50 LLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERV 129 (222)
Q Consensus 50 ~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (222)
.++..+..++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++...++. .++.+...+...+..
T Consensus 60 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~------ 131 (285)
T 4htf_A 60 RVLAEMGPQKLRVLDAGGGEGQTAIKMAERG-HQVILCDLSAQMIDRAKQAAEAKGVS-DNMQFIHCAAQDVAS------ 131 (285)
T ss_dssp HHHHHTCSSCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-CCG-GGEEEEESCGGGTGG------
T ss_pred HHHHhcCCCCCEEEEeCCcchHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCC-cceEEEEcCHHHhhh------
Confidence 3444444457899999999999999999885 68999999999999999999887764 478898888765420
Q ss_pred ccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 130 DGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
. ..++||+|+++.++++ ...+++++.++|||||.+++..
T Consensus 132 --~-------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 132 --H-------------LETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp --G-------------CSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --h-------------cCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 0 5678999999988876 4678999999999999999864
No 54
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.61 E-value=8.8e-15 Score=136.48 Aligned_cols=140 Identities=16% Similarity=0.149 Sum_probs=115.5
Q ss_pred CcceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh
Q 047371 24 VQATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL 103 (222)
Q Consensus 24 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~ 103 (222)
+....+.+++...+.+|.+...+....++.... +|++|||+|||+|.+++.++..+..+|+++|+|+.+++.|++|+..
T Consensus 506 E~g~~~~v~~~~~~~tG~f~d~r~~r~~l~~~~-~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ 584 (703)
T 3v97_A 506 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS-KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL 584 (703)
T ss_dssp ETTEEEEECSSSSSSCSCCGGGHHHHHHHHHHC-TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred ECCEEEEEeccccccCCCcccHHHHHHHHHHhc-CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 346778888888888888888888888877654 6899999999999999999988777899999999999999999999
Q ss_pred cCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc--------------cHHHHHHHH
Q 047371 104 NNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN--------------PLPQLADHI 169 (222)
Q Consensus 104 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~--------------~~~~~l~~~ 169 (222)
+++..+++++...|...+.. . ..++||+|++++|.. .+.+++..+
T Consensus 585 ngl~~~~v~~i~~D~~~~l~--------~-------------~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a 643 (703)
T 3v97_A 585 NGLTGRAHRLIQADCLAWLR--------E-------------ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 643 (703)
T ss_dssp TTCCSTTEEEEESCHHHHHH--------H-------------CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHH
T ss_pred cCCCccceEEEecCHHHHHH--------h-------------cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHH
Confidence 99864578898887654310 0 356899999999852 145679999
Q ss_pred HHcccCCeEEEEecCC
Q 047371 170 VSYAKPGAVVGISGIL 185 (222)
Q Consensus 170 ~~~LkpgG~l~~~~~~ 185 (222)
.++|+|||.+++++..
T Consensus 644 ~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 644 KRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHHEEEEEEEEEEECC
T ss_pred HHhcCCCcEEEEEECC
Confidence 9999999999997654
No 55
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.61 E-value=6e-15 Score=117.11 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=92.6
Q ss_pred HHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 46 KLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
..+..++...++++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|+++... . .++.+...|...+..
T Consensus 30 ~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~--~~i~~~~~d~~~~~~-- 103 (215)
T 2pxx_A 30 SSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--V--PQLRWETMDVRKLDF-- 103 (215)
T ss_dssp HHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--C--TTCEEEECCTTSCCS--
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--C--CCcEEEEcchhcCCC--
Confidence 3466777777788999999999999999999988656899999999999999988753 1 367788877655422
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEeccccccH------------------HHHHHHHHHcccCCeEEEEecCCC
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL------------------PQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~------------------~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
+.++||+|+++.+++++ ..+++++.++|||||.+++.....
T Consensus 104 --------------------~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 104 --------------------PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp --------------------CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred --------------------CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 56789999998876432 468999999999999999976544
No 56
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=5.9e-15 Score=120.05 Aligned_cols=128 Identities=16% Similarity=0.184 Sum_probs=98.4
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++....+++|+|+++.+++.|+++....+. .++.+...+...+..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~d~~~~~~-------------- 142 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK--RVRNYFCCGLQDFTP-------------- 142 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG--GEEEEEECCGGGCCC--------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC--ceEEEEEcChhhcCC--------------
Confidence 4789999999999999998877667999999999999999998876542 367787777654422
Q ss_pred cccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecCCC--------------CcHHHHHHHHHh
Q 047371 138 SHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGILS--------------EQLPRIINRYSE 198 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~--------------~~~~~~~~~~~~ 198 (222)
+.++||+|+++..+++ +..+++++.++|||||++++.+... ....++.+.+++
T Consensus 143 --------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (241)
T 2ex4_A 143 --------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICS 214 (241)
T ss_dssp --------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHH
T ss_pred --------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHH
Confidence 4568999999887765 3368999999999999999954321 146777777776
Q ss_pred h-hhcceecccC
Q 047371 199 F-LEDILVSEKD 209 (222)
Q Consensus 199 ~-~~~~~~~~~~ 209 (222)
. |..+......
T Consensus 215 aGf~~~~~~~~~ 226 (241)
T 2ex4_A 215 AGLSLLAEERQE 226 (241)
T ss_dssp TTCCEEEEEECC
T ss_pred cCCeEEEeeecC
Confidence 5 7666654433
No 57
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.61 E-value=1.1e-14 Score=115.99 Aligned_cols=135 Identities=20% Similarity=0.201 Sum_probs=100.7
Q ss_pred hhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 54 SLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 54 ~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++. + +.+...+...+.
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~d~~~~~----------- 98 (211)
T 3e23_A 39 GELPAGAKILELGCGAGYQAEAMLAAG-FDVDATDGSPELAAEASRRL---G-----RPVRTMLFHQLD----------- 98 (211)
T ss_dssp TTSCTTCEEEESSCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH---T-----SCCEECCGGGCC-----------
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHcC-CeEEEECCCHHHHHHHHHhc---C-----CceEEeeeccCC-----------
Confidence 335678999999999999999999885 58999999999999999876 2 234555543331
Q ss_pred hccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCCC--------------CcHHHHHH
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGILS--------------EQLPRIIN 194 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~~--------------~~~~~~~~ 194 (222)
..++||+|+++.++++. ..+++++.+.|||||++++..... ....++.+
T Consensus 99 ------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (211)
T 3e23_A 99 ------------AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRA 166 (211)
T ss_dssp ------------CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHH
T ss_pred ------------CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHH
Confidence 46789999999888764 368999999999999999863322 25677877
Q ss_pred HHHh-h-hhcceeccc---------CCceEeecccCC
Q 047371 195 RYSE-F-LEDILVSEK---------DDWRCVSGTKFS 220 (222)
Q Consensus 195 ~~~~-~-~~~~~~~~~---------~~w~~~~~~k~~ 220 (222)
.+++ + |..+..... ..|..+..++.+
T Consensus 167 ~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~ 203 (211)
T 3e23_A 167 RYAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPE 203 (211)
T ss_dssp HHHHHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred HHHhCCCcEEEEEEeccCCCCCCCCceEEEEEEecCc
Confidence 7776 4 665554321 348777776654
No 58
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=6.7e-15 Score=123.58 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=87.3
Q ss_pred hcCCCcEEEEccCCCHHH-HHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILG-IAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~-~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++++|||+|||+|.++ +.+++...++|+|+|+++.+++.|++++...++ .++++..+|+..+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl--~~v~~v~gDa~~l------------- 184 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV--DGVNVITGDETVI------------- 184 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC--CSEEEEESCGGGG-------------
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC--CCeEEEECchhhC-------------
Confidence 678999999999998765 556665568999999999999999999988887 3899998887554
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
++++||+|++.........+++++.+.|||||.+++..
T Consensus 185 -----------~d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 185 -----------DGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp -----------GGCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -----------CCCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 46789999987766667889999999999999999853
No 59
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.61 E-value=1.5e-14 Score=127.94 Aligned_cols=157 Identities=16% Similarity=0.125 Sum_probs=115.0
Q ss_pred ceeEEeCCCcccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 26 ATNIILNPGLAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 26 ~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
...+.++|+..|..+...+..++..++... ..++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++..+
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~ 331 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLN 331 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHc
Confidence 567888887655433333444444443333 346789999999999999999987 579999999999999999999988
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++. ++.+...|....... .+. ..++||+|++|+|+....++++.+.+ ++|++.++++|.
T Consensus 332 ~~~--~v~f~~~d~~~~l~~-----~~~-------------~~~~fD~Vv~dPPr~g~~~~~~~l~~-~~p~~ivyvsc~ 390 (433)
T 1uwv_A 332 GLQ--NVTFYHENLEEDVTK-----QPW-------------AKNGFDKVLLDPARAGAAGVMQQIIK-LEPIRIVYVSCN 390 (433)
T ss_dssp TCC--SEEEEECCTTSCCSS-----SGG-------------GTTCCSEEEECCCTTCCHHHHHHHHH-HCCSEEEEEESC
T ss_pred CCC--ceEEEECCHHHHhhh-----hhh-------------hcCCCCEEEECCCCccHHHHHHHHHh-cCCCeEEEEECC
Confidence 875 899998887553100 000 34579999999999877777776654 799999999988
Q ss_pred CCCcHHHHHHHHHhhhhcce
Q 047371 185 LSEQLPRIINRYSEFLEDIL 204 (222)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~ 204 (222)
+....+++....+.++....
T Consensus 391 p~tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 391 PATLARDSEALLKAGYTIAR 410 (433)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHhhHHHHHHCCcEEEE
Confidence 77777777666555554433
No 60
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.60 E-value=1.6e-14 Score=118.08 Aligned_cols=98 Identities=19% Similarity=0.321 Sum_probs=83.7
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|+++.. ..++.+...+...+..
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~-------------- 104 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-----SPVVCYEQKAIEDIAI-------------- 104 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-----CTTEEEEECCGGGCCC--------------
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-----cCCeEEEEcchhhCCC--------------
Confidence 688999999999999999998876699999999999999998765 1378888887765432
Q ss_pred cccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEe
Q 047371 138 SHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+.++||+|+++.++++ ...+++++.++|||||.++++
T Consensus 105 --------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 105 --------EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp --------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 5688999999888776 467899999999999999985
No 61
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.60 E-value=1.2e-14 Score=116.95 Aligned_cols=111 Identities=18% Similarity=0.382 Sum_probs=90.5
Q ss_pred HHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC---CceeEEecCCccccccccc
Q 047371 51 LLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP---KKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 51 ~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~ 127 (222)
.+...++++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++...++.. .++.+...+...+..
T Consensus 23 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---- 97 (235)
T 3sm3_A 23 IIHNYLQEDDEILDIGCGSGKISLELASKG-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF---- 97 (235)
T ss_dssp THHHHCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS----
T ss_pred HHHHhCCCCCeEEEECCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC----
Confidence 444556789999999999999999999885 589999999999999999887766531 257788777765432
Q ss_pred ccccchhccccccccCCCCCCCeeEEEeccccccH---H---HHHHHHHHcccCCeEEEEecC
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL---P---QLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~---~---~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++..+++. . .+++++.++|||||.+++.++
T Consensus 98 ------------------~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 98 ------------------HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp ------------------CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------------CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 56789999998887763 2 689999999999999998654
No 62
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.60 E-value=1.3e-14 Score=116.53 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=93.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++. ++.+...|+..+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~--nv~~~~~d~~~l~~------------ 102 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ--NVKLLNIDADTLTD------------ 102 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS--SEEEECCCGGGHHH------------
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC--CEEEEeCCHHHHHh------------
Confidence 35789999999999999998875 5679999999999999999999888774 78888887754310
Q ss_pred cccccccCCCCCCCeeEEEecccccc-----------HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP-----------LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
..+.+.||.|+++.+..+ ...+++.+.++|||||.+++.+........+.+.+...
T Consensus 103 --------~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 103 --------VFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEY 169 (213)
T ss_dssp --------HCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHH
T ss_pred --------hcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 014677999998754321 35789999999999999999764444455555555543
No 63
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.60 E-value=1.7e-14 Score=115.63 Aligned_cols=113 Identities=22% Similarity=0.231 Sum_probs=90.4
Q ss_pred hHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccc
Q 047371 45 TKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (222)
...+...+...++++.+|||+|||+|.++..+++.+. +++|+|+++.+++.|+++....+ .++.+...|...+..
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~- 99 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSF- 99 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCS-
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC---CCceEEECchhcCCC-
Confidence 3444555555566789999999999999999988764 99999999999999999987665 378888887755422
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEeccc--ccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANIL--LNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~--~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.+ +++ ...+++++.++|||||.+++..
T Consensus 100 ---------------------~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 100 ---------------------EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp ---------------------CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------------------CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4678999999988 444 3468999999999999998853
No 64
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=1e-14 Score=126.97 Aligned_cols=113 Identities=20% Similarity=0.239 Sum_probs=88.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhc-----C-CCCCceeEEecCCccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALN-----N-IGPKKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~-----~-~~~~~v~~~~~~~~~~~~~~~~ 127 (222)
..++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++... + ....++.+...+...+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~--- 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA--- 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC---
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc---
Confidence 457889999999999999988875 4569999999999999999988654 3 3334788998887654100
Q ss_pred ccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
...++ +.++||+|+++.++++ ...+++++.++|||||.+++.+.
T Consensus 158 ~~~~~-------------~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 158 EPEGV-------------PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp BSCCC-------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCC-------------CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 00011 5678999999998876 46789999999999999999643
No 65
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=1.7e-14 Score=118.90 Aligned_cols=134 Identities=14% Similarity=0.048 Sum_probs=94.9
Q ss_pred HHHHHHhhh--cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh----------cCC-----CCCc
Q 047371 48 CLLLLQSLI--KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL----------NNI-----GPKK 110 (222)
Q Consensus 48 ~~~~l~~~~--~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~----------~~~-----~~~~ 110 (222)
+.+++.... +++.+|||+|||+|..+..|++.+. +|+|+|+|+.+++.|++.... .+. ...+
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 344444332 4788999999999999999999874 899999999999999775431 000 1137
Q ss_pred eeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecCC
Q 047371 111 IKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
+++...|...+.. ...++||+|+++..+++ ...+++++.++|||||.+++.++.
T Consensus 135 i~~~~~D~~~l~~---------------------~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 135 ISLYCCSIFDLPR---------------------ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp EEEEESCTTTGGG---------------------GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred eEEEECccccCCc---------------------ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 8888888766532 01378999998776654 345899999999999998643211
Q ss_pred -----------CCcHHHHHHHHHhhhhcc
Q 047371 186 -----------SEQLPRIINRYSEFLEDI 203 (222)
Q Consensus 186 -----------~~~~~~~~~~~~~~~~~~ 203 (222)
.....++.+.+...|+..
T Consensus 194 ~~~~~~~g~~~~~~~~el~~~l~~~f~v~ 222 (252)
T 2gb4_A 194 YDPTKHAGPPFYVPSAELKRLFGTKCSMQ 222 (252)
T ss_dssp CCTTSCCCSSCCCCHHHHHHHHTTTEEEE
T ss_pred cCCccCCCCCCCCCHHHHHHHhhCCeEEE
Confidence 134567777777655443
No 66
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.60 E-value=4.1e-14 Score=114.81 Aligned_cols=107 Identities=13% Similarity=0.153 Sum_probs=90.0
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...++. +++.+...|...... ..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-------~~--- 138 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE-NQVRIIEGNALEQFE-------NV--- 138 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEEESCGGGCHH-------HH---
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECCHHHHHH-------hh---
Confidence 47899999999999999999874 4679999999999999999999888875 479999888754310 00
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|+++.....+..+++.+.+.|||||++++...
T Consensus 139 ----------~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 139 ----------NDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp ----------TTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred ----------ccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 257899999998888889999999999999999999543
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=4.3e-14 Score=110.16 Aligned_cols=125 Identities=18% Similarity=0.163 Sum_probs=94.9
Q ss_pred HHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccc
Q 047371 50 LLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERV 129 (222)
Q Consensus 50 ~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (222)
.++..+++++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++.. ++.+...+......
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~-------~~~~~~~d~~~~~~------ 103 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILIDYAKQDFP-------EARWVVGDLSVDQI------ 103 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTTSCC------
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCC-CcEEEEcCCHHHHHHHHHhCC-------CCcEEEcccccCCC------
Confidence 3555557789999999999999999998885 689999999999999988752 46677777654321
Q ss_pred ccchhccccccccCCCCCCCeeEEEec-ccccc-----HHHHHHHHHHcccCCeEEEEecCC--CCcHHHHHHHHHhh-h
Q 047371 130 DGVVEYLSSHEIRGISETEEYDVVIAN-ILLNP-----LPQLADHIVSYAKPGAVVGISGIL--SEQLPRIINRYSEF-L 200 (222)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~D~v~~~-~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~~-~ 200 (222)
+.++||+|+++ ..+++ ...+++.+.++|+|||.+++.... .....++.+.+... |
T Consensus 104 ----------------~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf 167 (195)
T 3cgg_A 104 ----------------SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGL 167 (195)
T ss_dssp ----------------CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTE
T ss_pred ----------------CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCC
Confidence 46789999998 45544 256899999999999999986432 24567777777664 5
Q ss_pred hcce
Q 047371 201 EDIL 204 (222)
Q Consensus 201 ~~~~ 204 (222)
....
T Consensus 168 ~~~~ 171 (195)
T 3cgg_A 168 ELEN 171 (195)
T ss_dssp EEEE
T ss_pred EEee
Confidence 4443
No 68
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.60 E-value=2.6e-14 Score=114.22 Aligned_cols=98 Identities=14% Similarity=0.198 Sum_probs=81.8
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++.. .++.+...+...+..
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~------------- 103 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEV------------- 103 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCC-------------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCC-------------
Confidence 478899999999999999998885 689999999999999998764 266788877765532
Q ss_pred ccccccCCCCCCCeeEEEeccccccHH-----HHHHHHHHcccCCeEEEEecC
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLP-----QLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~-----~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+ ++||+|+++.+++++. .+++++.+.|||||.+++...
T Consensus 104 ---------~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 104 ---------P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp ---------C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ---------C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 3 7899999998887743 289999999999999999743
No 69
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.59 E-value=2.4e-14 Score=114.49 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=84.6
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCC---CceeEEecCCcccccccccccccc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGP---KKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++.. .++.+...+......
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--------- 98 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK--------- 98 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG---------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc---------
Confidence 46889999999999999999886 44799999999999999999987666541 268888887644321
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEe
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++.+++++ ..+++++.++|||||.+++.
T Consensus 99 -------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 99 -------------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp -------------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred -------------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 35689999999888753 46799999999999987774
No 70
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=2.4e-14 Score=112.39 Aligned_cols=121 Identities=18% Similarity=0.247 Sum_probs=94.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++...++. ++.+...|...+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~-------------- 93 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG-YDVDAWDKNAMSIANVERIKSIENLD--NLHTRVVDLNNLT-------------- 93 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCT--TEEEEECCGGGCC--------------
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhCCCC--CcEEEEcchhhCC--------------
Confidence 367899999999999999999885 59999999999999999998877764 6888877765431
Q ss_pred ccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecCC-------------CCcHHHHHHHHHh
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGIL-------------SEQLPRIINRYSE 198 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~-------------~~~~~~~~~~~~~ 198 (222)
..++||+|+++.++++ ...+++.+.++|||||.+++.... .....++.+.+..
T Consensus 94 ---------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 164 (199)
T 2xvm_A 94 ---------FDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG 164 (199)
T ss_dssp ---------CCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT
T ss_pred ---------CCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC
Confidence 2567999999887765 456899999999999998764321 1245677777666
Q ss_pred hhhcce
Q 047371 199 FLEDIL 204 (222)
Q Consensus 199 ~~~~~~ 204 (222)
|+.++
T Consensus 165 -f~~~~ 169 (199)
T 2xvm_A 165 -WERVK 169 (199)
T ss_dssp -SEEEE
T ss_pred -CeEEE
Confidence 54444
No 71
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.59 E-value=4.8e-14 Score=115.64 Aligned_cols=110 Identities=15% Similarity=0.275 Sum_probs=90.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...++. .++++...|......
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~l~---------- 129 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD-QRVTLREGPALQSLE---------- 129 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH----------
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH----------
Confidence 347899999999999999999875 3 579999999999999999999988876 478998887654211
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
.....++||+|+++.....+..+++.+.++|||||++++....
T Consensus 130 ---------~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 130 ---------SLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ---------TCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ---------hcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 0112458999999988878889999999999999999986554
No 72
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.59 E-value=1.6e-14 Score=118.27 Aligned_cols=143 Identities=10% Similarity=0.023 Sum_probs=109.1
Q ss_pred HHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 48 CLLLLQSLIKGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 48 ~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
-++.+..+++++.+|||+|||+|.+++.+++.+ ..+|+|+|+++.+++.|++|+..+++. +++++...|.....
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-~~I~v~~gD~l~~~---- 85 (244)
T 3gnl_A 11 RLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT-EQIDVRKGNGLAVI---- 85 (244)
T ss_dssp HHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEEECSGGGGC----
T ss_pred HHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEecchhhcc----
Confidence 355677888999999999999999999999875 568999999999999999999999986 47899888764331
Q ss_pred cccccchhccccccccCCCCCCCeeEEEe-ccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcce
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIA-NILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDIL 204 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~-~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (222)
.+..+||+|++ +..-.-+.++++.....|++++.++++.. .....+.+.+.+. |....
T Consensus 86 ------------------~~~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~--~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 86 ------------------EKKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN--IAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp ------------------CGGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES--SCHHHHHHHHHHHTEEEEE
T ss_pred ------------------CccccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC--CChHHHHHHHHHCCCEEEE
Confidence 12235998875 44334477899999999999999999853 4677888888776 65533
Q ss_pred e---cccCCceEee
Q 047371 205 V---SEKDDWRCVS 215 (222)
Q Consensus 205 ~---~~~~~w~~~~ 215 (222)
. ...+.+..+.
T Consensus 146 E~lv~e~~k~Yeii 159 (244)
T 3gnl_A 146 EAILREDNKVYEIM 159 (244)
T ss_dssp EEEEEETTEEEEEE
T ss_pred EEEEEECCEEEEEE
Confidence 2 3344444333
No 73
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.59 E-value=1.4e-14 Score=124.19 Aligned_cols=142 Identities=18% Similarity=0.243 Sum_probs=107.3
Q ss_pred cceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 25 QATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
....+.+++...|....+.+.++ .+...+.++.+|||+|||+|.+++. ++ +..+|+|+|+|+.+++.|++++..+
T Consensus 165 ~g~~f~~d~~~~~~~~~~~~er~---~i~~~~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n 239 (336)
T 2yx1_A 165 NGYRLWVDIAKVYFSPRLGGERA---RIMKKVSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLN 239 (336)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHH---HHHHHCCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEEehHHhccCCccHHHHH---HHHHhcCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHc
Confidence 45677777875553333333332 3334556899999999999999999 87 5789999999999999999999999
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++. .++.+...|...+ . ++||+|++++|... ..+++.+.++|+|||.+++.++
T Consensus 240 ~l~-~~v~~~~~D~~~~------------------------~-~~fD~Vi~dpP~~~-~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 240 KLE-HKIIPILSDVREV------------------------D-VKGNRVIMNLPKFA-HKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp TCT-TTEEEEESCGGGC------------------------C-CCEEEEEECCTTTG-GGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCC-CcEEEEECChHHh------------------------c-CCCcEEEECCcHhH-HHHHHHHHHHcCCCCEEEEEEe
Confidence 885 3788888876543 2 67999999987653 4789999999999999888655
Q ss_pred CCCcHHHHHHHHHhh
Q 047371 185 LSEQLPRIINRYSEF 199 (222)
Q Consensus 185 ~~~~~~~~~~~~~~~ 199 (222)
... .....+.+.+.
T Consensus 293 ~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 293 GKD-FDKAIKLFEKK 306 (336)
T ss_dssp ESS-SHHHHHHHHHH
T ss_pred ecC-chHHHHHHHHh
Confidence 444 45555555543
No 74
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=1.6e-14 Score=120.92 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=88.7
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+++.+|||+|||+|.++..+++....+++|+|+++.+++.|+++....++. .++.+...+...++.
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~------------- 146 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA-DNITVKYGSFLEIPC------------- 146 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT-TTEEEEECCTTSCSS-------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEEcCcccCCC-------------
Confidence 578899999999999999988762359999999999999999998877775 478898888765532
Q ss_pred ccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++++||+|++..++++ ...+++++.++|||||.+++.+.
T Consensus 147 ---------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 147 ---------EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp ---------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 5678999999887766 46789999999999999998643
No 75
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.59 E-value=1.5e-14 Score=118.08 Aligned_cols=129 Identities=16% Similarity=0.120 Sum_probs=99.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|+++.... .++.+...+...+..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~------------- 154 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMETATL------------- 154 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGGCCC-------------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHHCCC-------------
Confidence 467899999999999999888765678999999999999999887543 367888877655422
Q ss_pred ccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCC---------------CCcHHHHHHHH
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGIL---------------SEQLPRIINRY 196 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~---------------~~~~~~~~~~~ 196 (222)
+.++||+|++...++++ ..+++++.++|||||++++.+.. .....++.+.+
T Consensus 155 ---------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 155 ---------PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp ---------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHH
T ss_pred ---------CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHH
Confidence 56789999998887764 45799999999999999996531 12346777777
Q ss_pred Hhh-hhcceecccCCc
Q 047371 197 SEF-LEDILVSEKDDW 211 (222)
Q Consensus 197 ~~~-~~~~~~~~~~~w 211 (222)
+.. |..+.......|
T Consensus 226 ~~aGf~~~~~~~~~~~ 241 (254)
T 1xtp_A 226 NESGVRVVKEAFQEEW 241 (254)
T ss_dssp HHHTCCEEEEEECTTC
T ss_pred HHCCCEEEEeeecCCC
Confidence 664 766666555444
No 76
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.59 E-value=1.7e-14 Score=111.67 Aligned_cols=126 Identities=18% Similarity=0.146 Sum_probs=97.1
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccc
Q 047371 43 ATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122 (222)
Q Consensus 43 ~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~ 122 (222)
+.+..+.+.+.....++.+|||+|||+|.++..+++.+ +++|+|+|+.+++. ..++++...|.....
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~-----------~~~~~~~~~d~~~~~ 74 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES-----------HRGGNLVRADLLCSI 74 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT-----------CSSSCEEECSTTTTB
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc-----------ccCCeEEECChhhhc
Confidence 44555666665433567899999999999999999876 99999999999887 125678888765421
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEecccccc------------HHHHHHHHHHcccCCeEEEEecCCCCcHH
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP------------LPQLADHIVSYAKPGAVVGISGILSEQLP 190 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 190 (222)
+.++||+|++|+++++ ...++..+.+.+ |||.+++......+..
T Consensus 75 -----------------------~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~ 130 (170)
T 3q87_B 75 -----------------------NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPK 130 (170)
T ss_dssp -----------------------CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHH
T ss_pred -----------------------ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHH
Confidence 4578999999999874 345778888888 9999999877778888
Q ss_pred HHHHHHHhh-hhccee
Q 047371 191 RIINRYSEF-LEDILV 205 (222)
Q Consensus 191 ~~~~~~~~~-~~~~~~ 205 (222)
++.+.+++. |.....
T Consensus 131 ~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 131 EVLARLEERGYGTRIL 146 (170)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCcEEEE
Confidence 888888774 554443
No 77
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=2.7e-14 Score=114.70 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=89.6
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...++. .++++...+...... .+
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-------~~-- 132 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS-DKIGLRLSPAKDTLA-------EL-- 132 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-------HH--
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC-CceEEEeCCHHHHHH-------Hh--
Confidence 46889999999999999999875 3 589999999999999999999888876 468888887643310 00
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
..-...++||+|+++.+...+..+++.+.++|||||++++....
T Consensus 133 -------~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 133 -------IHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp -------HTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred -------hhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 00001278999999988877889999999999999999996543
No 78
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.59 E-value=1.3e-14 Score=118.98 Aligned_cols=103 Identities=19% Similarity=0.201 Sum_probs=85.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++....+|+|+|+++.+++.|+++.... .++.+...|...+..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~------------ 116 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILTKEF------------ 116 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTTCCC------------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECccccCCC------------
Confidence 4578899999999999999988753469999999999999999876543 378888888765532
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++.+++++ ..+++++.++|||||.+++.+.
T Consensus 117 ----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 117 ----------PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp ----------CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 57889999999888775 3479999999999999999654
No 79
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.59 E-value=3.2e-14 Score=115.22 Aligned_cols=110 Identities=18% Similarity=0.195 Sum_probs=90.9
Q ss_pred HHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 46 KLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
..+...+...++++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++.. ..++.+...+...+..
T Consensus 41 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~-- 112 (242)
T 3l8d_A 41 STIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTG-YKAVGVDISEVMIQKGKERGE-----GPDLSFIKGDLSSLPF-- 112 (242)
T ss_dssp TTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHTTTC-----BTTEEEEECBTTBCSS--
T ss_pred HHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhcc-----cCCceEEEcchhcCCC--
Confidence 34566677777889999999999999999999885 589999999999999988741 1377888888765532
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++..+++ ...+++++.++|||||++++..
T Consensus 113 --------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 113 --------------------ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp --------------------CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 5788999999888776 4578999999999999999864
No 80
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=2.8e-14 Score=114.16 Aligned_cols=104 Identities=18% Similarity=0.264 Sum_probs=84.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCC---CceeEEecCCcccccccccccccc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGP---KKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.|++++...++.. .++++...+......
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--------- 98 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK--------- 98 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG---------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc---------
Confidence 468899999999999999998763 4799999999999999999987666541 168888887644321
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEe
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++.+++++ ..+++++.+.|||||.++..
T Consensus 99 -------------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 99 -------------RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp -------------GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred -------------ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 45789999998888763 36799999999999977764
No 81
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=1.3e-14 Score=122.66 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=89.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++. .++.+...|...+..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~------------- 181 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID-DHVRSRVCNMLDTPF------------- 181 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCC-------------
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CceEEEECChhcCCC-------------
Confidence 468899999999999999998863368999999999999999999988876 479999988866532
Q ss_pred ccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEec
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++..+++ ...+++++.++|||||.+++.+
T Consensus 182 ---------~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 182 ---------DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ---------CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5678999999887766 4678999999999999999854
No 82
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=2.2e-14 Score=116.08 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=100.4
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
.+..++.....++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++....+.. .++.+...|...+.
T Consensus 55 ~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~---- 128 (235)
T 3lcc_A 55 LIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKANETYGSSPKA-EYFSFVKEDVFTWR---- 128 (235)
T ss_dssp HHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTT-EEEEEECSCHHHHHHHHHHHTTSGGG-GGEEEECCCTTTCC----
T ss_pred HHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHhhccCCC-cceEEEECchhcCC----
Confidence 3444554443345699999999999999887754 68999999999999999988754432 47888888876542
Q ss_pred cccccchhccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecCCC----------CcHHH
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGILS----------EQLPR 191 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~ 191 (222)
+.++||+|+++.++++ ...+++.+.++|||||.+++..+.. ....+
T Consensus 129 -------------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (235)
T 3lcc_A 129 -------------------PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVST 189 (235)
T ss_dssp -------------------CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHH
T ss_pred -------------------CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHH
Confidence 4568999999887764 4568999999999999999854422 34567
Q ss_pred HHHHHHhh-hhccee
Q 047371 192 IINRYSEF-LEDILV 205 (222)
Q Consensus 192 ~~~~~~~~-~~~~~~ 205 (222)
+.+.+... |..++.
T Consensus 190 ~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 190 FEEVLVPIGFKAVSV 204 (235)
T ss_dssp HHHHHGGGTEEEEEE
T ss_pred HHHHHHHcCCeEEEE
Confidence 77777764 655543
No 83
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=8.9e-15 Score=120.95 Aligned_cols=131 Identities=11% Similarity=0.019 Sum_probs=90.5
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC---------------------------C
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP---------------------------K 109 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---------------------------~ 109 (222)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++....... .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4678999999999988887777766789999999999999998875432110 0
Q ss_pred cee-EEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccH-------HHHHHHHHHcccCCeEEEE
Q 047371 110 KIK-LHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-------PQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 110 ~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-------~~~l~~~~~~LkpgG~l~~ 181 (222)
++. +...|..... ++ .+ ...++||+|+++..+++. ..++++++++|||||++++
T Consensus 134 ~i~~~~~~D~~~~~--------~~---------~~-~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 134 AVKRVLKCDVHLGN--------PL---------AP-AVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp HEEEEEECCTTSSS--------TT---------TT-CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhheEEeccccCCC--------CC---------Cc-cccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 121 4444443210 00 00 025689999999887653 4579999999999999999
Q ss_pred ecCCC---------------CcHHHHHHHHHhh-hhccee
Q 047371 182 SGILS---------------EQLPRIINRYSEF-LEDILV 205 (222)
Q Consensus 182 ~~~~~---------------~~~~~~~~~~~~~-~~~~~~ 205 (222)
++... -...++.+.+... |..++.
T Consensus 196 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 196 TVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred EEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 75332 2566788888764 655554
No 84
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.9e-14 Score=119.64 Aligned_cols=119 Identities=14% Similarity=0.215 Sum_probs=91.7
Q ss_pred HHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHH--hCCCEEEEEeCChHHHHHHHHHHHhc-CCCCCceeEEecCCccc
Q 047371 46 KLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIK--FGAAMFVGVDIDPQVIKSAHQNAALN-NIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 46 ~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~--~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~~~~~~ 121 (222)
..+.+.+..+ .+++.+|||+|||+|..+..+++ .+..+|+|+|+++.+++.|++++... +.. .++.+...+...+
T Consensus 23 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 23 SDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY-KNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC-TTEEEEECCTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC-CceEEEEcCHHhC
Confidence 4455555555 45789999999999999999986 35789999999999999999998776 222 4889999988765
Q ss_pred ccccccccccchhccccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEE
Q 047371 122 TASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~ 181 (222)
... ..... ..++||+|+++.++++ ...+++++.++|||||.+++
T Consensus 102 ~~~---~~~~~-------------~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 102 KFL---GADSV-------------DKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGG---CTTTT-------------TSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred Ccc---ccccc-------------cCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 320 00000 1378999999888776 45689999999999999988
No 85
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=2.9e-14 Score=118.77 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=86.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++.+|||+|||+|.++..+++ .+ .+++|+|+++.+++.|++++...++. .++.+...|...+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~------------- 126 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENL-RSKRVLLAGWEQF------------- 126 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCC-SCEEEEESCGGGC-------------
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCC-CCeEEEECChhhC-------------
Confidence 45788999999999999999884 55 59999999999999999998877765 4788887776433
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
+ ++||+|++..+++++ ..+++++.++|||||.+++..+.
T Consensus 127 -----------~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 127 -----------D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp -----------C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -----------C-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 4 789999998887664 56899999999999999996543
No 86
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=5.1e-14 Score=113.04 Aligned_cols=111 Identities=14% Similarity=0.198 Sum_probs=89.5
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++. .++++...+...... .+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-------~~~- 127 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN-DRVEVRTGLALDSLQ-------QIE- 127 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-------HHH-
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-------HHH-
Confidence 47899999999999999999876 3 579999999999999999999888875 468898887643210 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
. ...++||+|+++.+...+..+++.+.++|||||++++....
T Consensus 128 --------~-~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 128 --------N-EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp --------H-TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred --------h-cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 0 01267999999998888889999999999999999986543
No 87
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.57 E-value=1.8e-14 Score=110.76 Aligned_cols=121 Identities=12% Similarity=0.140 Sum_probs=95.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++... +++|+|+++.+++.++++ . .++.+...+ ..+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~--~~v~~~~~d-~~~-------------- 71 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----F--DSVITLSDP-KEI-------------- 71 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----C--TTSEEESSG-GGS--------------
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----C--CCcEEEeCC-CCC--------------
Confidence 45788999999999999999988764 999999999999999887 1 267777666 221
Q ss_pred cccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecCCC------------CcHHHHHHHHHhhh
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGILS------------EQLPRIINRYSEFL 200 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~~~~~~ 200 (222)
+.++||+|+++.++++ ...+++++.+.|||||.+++..+.. ....++.+.++ +|
T Consensus 72 ----------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf 140 (170)
T 3i9f_A 72 ----------PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NF 140 (170)
T ss_dssp ----------CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TE
T ss_pred ----------CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-Cc
Confidence 5778999999988876 4678999999999999999964422 24567777777 87
Q ss_pred hcceecccCC
Q 047371 201 EDILVSEKDD 210 (222)
Q Consensus 201 ~~~~~~~~~~ 210 (222)
..++......
T Consensus 141 ~~~~~~~~~~ 150 (170)
T 3i9f_A 141 VVEKRFNPTP 150 (170)
T ss_dssp EEEEEECSST
T ss_pred EEEEccCCCC
Confidence 7776665553
No 88
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.57 E-value=2.8e-14 Score=113.08 Aligned_cols=117 Identities=18% Similarity=0.115 Sum_probs=92.7
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
++.+|||+|||+|.++..++.. +..+++|+|+++.+++.|++++...++. ++.+...+...+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~-------------- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE--NIEPVQSRVEEFP-------------- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS--SEEEEECCTTTSC--------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CeEEEecchhhCC--------------
Confidence 4789999999999999998875 5679999999999999999999888775 5888888775441
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhhhhc
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLED 202 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 202 (222)
+.++||+|+++. ++.+..+++.+.+.|+|||.+++.. ......++.+.+. .|..
T Consensus 129 ---------~~~~~D~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~-g~~~ 182 (207)
T 1jsx_A 129 ---------SEPPFDGVISRA-FASLNDMVSWCHHLPGEQGRFYALK-GQMPEDEIALLPE-EYQV 182 (207)
T ss_dssp ---------CCSCEEEEECSC-SSSHHHHHHHHTTSEEEEEEEEEEE-SSCCHHHHHTSCT-TEEE
T ss_pred ---------ccCCcCEEEEec-cCCHHHHHHHHHHhcCCCcEEEEEe-CCCchHHHHHHhc-CCce
Confidence 356899999876 4567889999999999999999863 3344455554443 4433
No 89
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=6e-14 Score=110.84 Aligned_cols=119 Identities=14% Similarity=0.165 Sum_probs=94.1
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
.+.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++. .++.+...+...+..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-------------- 98 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLG-HQIEGLEPATRLVELARQTH-------PSVTFHHGTITDLSD-------------- 98 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTT-CCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGGGGG--------------
T ss_pred CCCeEEEecCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-------CCCeEEeCccccccc--------------
Confidence 48899999999999999999885 58999999999999998862 267788777655432
Q ss_pred cccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCCC---------------CcHHHHHHHHH
Q 047371 138 SHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGILS---------------EQLPRIINRYS 197 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~~---------------~~~~~~~~~~~ 197 (222)
+.++||+|+++..++++ ..+++++.++|||||.+++..... ....++.+.++
T Consensus 99 --------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (203)
T 3h2b_A 99 --------SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALE 170 (203)
T ss_dssp --------SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHH
T ss_pred --------CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHH
Confidence 56889999998877664 568999999999999999865432 23677777777
Q ss_pred hh-hhcceec
Q 047371 198 EF-LEDILVS 206 (222)
Q Consensus 198 ~~-~~~~~~~ 206 (222)
+. |..+...
T Consensus 171 ~~Gf~~~~~~ 180 (203)
T 3h2b_A 171 TAGFQVTSSH 180 (203)
T ss_dssp HTTEEEEEEE
T ss_pred HCCCcEEEEE
Confidence 65 6555544
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=1.4e-14 Score=117.59 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=81.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.|+++....+ .++.+...+...+. .++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~-------~~~--- 124 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVA-------PTL--- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHG-------GGS---
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCHHHhh-------ccc---
Confidence 46788999999999999999987666699999999999999999887655 36888887765431 011
Q ss_pred cccccccCCCCCCCeeEEEe-cccc--c--c---HHHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIA-NILL--N--P---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~-~~~~--~--~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
++++||+|++ .... . + ...+++++.++|||||++++..
T Consensus 125 ----------~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 125 ----------PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ----------CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ----------CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 5678999999 2221 1 1 2356899999999999999853
No 91
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.56 E-value=4.9e-14 Score=115.39 Aligned_cols=118 Identities=24% Similarity=0.331 Sum_probs=97.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|.++..+++. + ..+++++|+++.+++.|++++...++. .++++...|.....
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~----------- 158 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD-DRVTIKLKDIYEGI----------- 158 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT-TTEEEECSCGGGCC-----------
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC-CceEEEECchhhcc-----------
Confidence 567899999999999999998876 3 689999999999999999999888875 35888887764321
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
+.++||+|+++++. ...+++++.+.|+|||.+++......+..++.+.+.+.
T Consensus 159 ------------~~~~~D~v~~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 159 ------------EEENVDHVILDLPQ--PERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREF 210 (255)
T ss_dssp ------------CCCSEEEEEECSSC--GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred ------------CCCCcCEEEECCCC--HHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 56779999998764 35689999999999999999876667777777777654
No 92
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=7.8e-14 Score=112.59 Aligned_cols=105 Identities=21% Similarity=0.286 Sum_probs=86.1
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|+++....+ ++.+...|...+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~------------- 105 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYIEADYSKYD------------- 105 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEEESCTTTCC-------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEEeCchhccC-------------
Confidence 46789999999999999998876 35799999999999999998875443 6888888876653
Q ss_pred cccccccCCCCCCCeeEEEeccccccHH-----HHHHHHHHcccCCeEEEEecCCCCc
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLP-----QLADHIVSYAKPGAVVGISGILSEQ 188 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~-----~~l~~~~~~LkpgG~l~~~~~~~~~ 188 (222)
..++||+|+++.++++.. .+++++.++|||||.+++.+.....
T Consensus 106 ----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 106 ----------FEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp ----------CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred ----------CCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 237899999998887742 4899999999999999997654433
No 93
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.56 E-value=6.1e-14 Score=112.80 Aligned_cols=125 Identities=12% Similarity=0.213 Sum_probs=95.5
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...++. +++++...|...... .+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~l~-------~~-- 126 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ-DKVTILNGASQDLIP-------QL-- 126 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHGG-------GT--
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CceEEEECCHHHHHH-------HH--
Confidence 46889999999999999999974 3579999999999999999999988875 478898887643211 00
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHH---HHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQ---LADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~---~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
..-...++||+|+++...+++.. ++..+ ++|||||++++.........++.+.+...
T Consensus 127 -------~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 186 (221)
T 3u81_A 127 -------KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGS 186 (221)
T ss_dssp -------TTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHC
T ss_pred -------HHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhC
Confidence 00001268999999987776654 45555 99999999999877666667777776654
No 94
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.56 E-value=3.1e-14 Score=113.20 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=83.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++. ..+++++|+++.+++.|++++...++. ++++...|......
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~------------ 139 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH--NVSTRHGDGWQGWQ------------ 139 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCGGGCCG------------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC--ceEEEECCcccCCc------------
Confidence 467899999999999999999988 479999999999999999999888875 78888887654321
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
..++||+|+++..++++. +.+.++|||||++++..
T Consensus 140 ----------~~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 140 ----------ARAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLPV 174 (210)
T ss_dssp ----------GGCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEEE
T ss_pred ----------cCCCccEEEEccchhhhh---HHHHHhcccCcEEEEEE
Confidence 356899999988777654 36889999999999964
No 95
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.56 E-value=9.6e-14 Score=114.15 Aligned_cols=107 Identities=15% Similarity=0.173 Sum_probs=86.3
Q ss_pred hHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccc
Q 047371 45 TKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (222)
...+..++....+++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++.. ++.+...|...+.
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~d~~~~~-- 106 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRNP-------DAVLHHGDMRDFS-- 106 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTTCC--
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCC-------CCEEEECChHHCC--
Confidence 344555565556678999999999999999998875 589999999999999998742 5678888776542
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecc-ccccH------HHHHHHHHHcccCCeEEEEe
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANI-LLNPL------PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~-~~~~~------~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++. +++++ ..+++++.++|||||.+++.
T Consensus 107 ---------------------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 ---------------------LGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ---------------------CSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---------------------ccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 357899999987 77664 34799999999999999995
No 96
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.56 E-value=2.6e-14 Score=114.00 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=87.1
Q ss_pred HHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccc
Q 047371 47 LCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 47 ~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (222)
....++... ..++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++....+ ++.+...|...+.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~-- 110 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWS----HISWAATDILQFS-- 110 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCS----SEEEEECCTTTCC--
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCC----CeEEEEcchhhCC--
Confidence 344444433 3456799999999999999998875 689999999999999999876432 7888888876542
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEeccccccH------HHHHHHHHHcccCCeEEEEec
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL------PQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~------~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.+++++ ..+++++.++|||||.++++.
T Consensus 111 ---------------------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 ---------------------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ---------------------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------------------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 46789999999888763 356999999999999999954
No 97
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=3.7e-14 Score=122.15 Aligned_cols=105 Identities=20% Similarity=0.199 Sum_probs=89.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|.+++.++.. +..+++|+|+++.+++.|++++...++. ++++...|...+..
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~--~i~~~~~D~~~~~~---------- 268 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS--WIRFLRADARHLPR---------- 268 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT--TCEEEECCGGGGGG----------
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC--ceEEEeCChhhCcc----------
Confidence 457889999999999999998875 3578999999999999999999998885 78899988866532
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-----------HHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-----------LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.+.||+|++|+|+.. +..+++.+.+.|||||.+++.+.
T Consensus 269 ------------~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 269 ------------FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ------------TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ------------ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4566899999999853 35688999999999999998644
No 98
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.56 E-value=6.4e-14 Score=113.34 Aligned_cols=109 Identities=14% Similarity=0.099 Sum_probs=85.5
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
.+.+++.....++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++....+. ++.+...+...+.
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~---- 97 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLSEAENKFRSQGL---KPRLACQDISNLN---- 97 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTTC---CCEEECCCGGGCC----
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcCC---CeEEEecccccCC----
Confidence 3344443333467899999999999999998875 6899999999999999998876653 5677777665442
Q ss_pred cccccchhccccccccCCCCCCCeeEEEecc-ccccH------HHHHHHHHHcccCCeEEEEe
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANI-LLNPL------PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~-~~~~~------~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++. +++++ ..+++++.++|||||.+++.
T Consensus 98 -------------------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 -------------------INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -------------------CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -------------------ccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 237899999987 77664 45799999999999999984
No 99
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.56 E-value=8.2e-14 Score=117.32 Aligned_cols=171 Identities=13% Similarity=0.127 Sum_probs=112.4
Q ss_pred eeEEeCCCcccccCC-cchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 27 TNIILNPGLAFGTGE-HATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~-~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
+.+.++....+.... ..+..++........+++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++...
T Consensus 51 ~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~ 130 (294)
T 3adn_A 51 RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNH 130 (294)
T ss_dssp CEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHH
T ss_pred eEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhc
Confidence 345555554443221 22333333322222356789999999999999999886 4678999999999999999988654
Q ss_pred C---CCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHHHHHHHHccc
Q 047371 105 N---IGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHIVSYAK 174 (222)
Q Consensus 105 ~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~~~~Lk 174 (222)
+ +...++++...|+..+.. ...++||+|+++.+... ..++++.+.+.||
T Consensus 131 ~~~~~~~~rv~~~~~D~~~~l~---------------------~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lk 189 (294)
T 3adn_A 131 NAGSYDDPRFKLVIDDGVNFVN---------------------QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN 189 (294)
T ss_dssp HSSCTTCTTCCEECSCSCC------------------------CCCCCEEEEEECC----------CCHHHHHHHHHTEE
T ss_pred ccccccCCceEEEEChHHHHHh---------------------hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcC
Confidence 2 233578888888755421 03578999999765321 2668999999999
Q ss_pred CCeEEEEec----CCCCcHHHHHHHHHhhhhccee-------cccCCceEeeccc
Q 047371 175 PGAVVGISG----ILSEQLPRIINRYSEFLEDILV-------SEKDDWRCVSGTK 218 (222)
Q Consensus 175 pgG~l~~~~----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~w~~~~~~k 218 (222)
|||.+++.. ........+.+.+...|..+.. ...+.|.-+.+.|
T Consensus 190 pgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 190 PGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp EEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEES
T ss_pred CCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEeC
Confidence 999999853 2234456667777776655442 2246677666555
No 100
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.56 E-value=4.6e-14 Score=116.76 Aligned_cols=113 Identities=20% Similarity=0.275 Sum_probs=92.3
Q ss_pred HHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccc
Q 047371 47 LCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTA 123 (222)
Q Consensus 47 ~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~ 123 (222)
.+..++... ++++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++. ++.+...|...+..
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~~ 101 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK--NVKFLQANIFSLPF 101 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCGGGCCS
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEcccccCCC
Confidence 344444433 467899999999999999998876 3579999999999999999999887775 78888887765432
Q ss_pred ccccccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++..+++ ...+++++.++|||||.+++..
T Consensus 102 ----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 102 ----------------------EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ----------------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------------------CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5678999999888766 4578999999999999999853
No 101
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=2.2e-14 Score=117.50 Aligned_cols=111 Identities=19% Similarity=0.196 Sum_probs=89.6
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..++.+++. + ..+|+++|+++.+++.|++++...++. +++++..+|+......... .-
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~~~~~---~~-- 132 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE-HKIKLRLGPALDTLHSLLN---EG-- 132 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT-TTEEEEESCHHHHHHHHHH---HH--
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHHHHhh---cc--
Confidence 46789999999999999999874 2 579999999999999999999988876 5899998887543110000 00
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|+++.....+..+++.+.++|||||++++...
T Consensus 133 -----------~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 133 -----------GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp -----------CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred -----------CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 147899999998877788899999999999999999644
No 102
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.56 E-value=6.6e-14 Score=116.80 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=105.1
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh--cCCCCCceeEEecCCcccccccccccccch
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL--NNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+.+.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++.. .++...++++...|+..+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~---------- 143 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA---------- 143 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH----------
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh----------
Confidence 45789999999999999999887 568999999999999999998754 23433588999888754311
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-------HHHHHHHHHHcccCCeEEEEecCC----CCcHHHHHHHHHhhhhc
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHIVSYAKPGAVVGISGIL----SEQLPRIINRYSEFLED 202 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~~~~~~~~ 202 (222)
. ..++||+|+++++... ..++++.+.+.|||||.+++.... ......+.+.+.+.|..
T Consensus 144 ---------~--~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 144 ---------K--SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPI 212 (275)
T ss_dssp ---------T--CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSE
T ss_pred ---------h--CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCC
Confidence 0 3568999999876532 257999999999999999996322 23345666667766655
Q ss_pred ceec-------ccCCceEeeccc
Q 047371 203 ILVS-------EKDDWRCVSGTK 218 (222)
Q Consensus 203 ~~~~-------~~~~w~~~~~~k 218 (222)
.... ..+.|..+..+|
T Consensus 213 v~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 213 TKLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp EEEEEECCTTSGGGCEEEEEEES
T ss_pred eEEEEEecCcccCcceEEEEeeC
Confidence 4432 257898877766
No 103
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.55 E-value=3.9e-14 Score=120.35 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=92.9
Q ss_pred ccccCCcchhHHHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCce
Q 047371 36 AFGTGEHATTKLCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKI 111 (222)
Q Consensus 36 ~f~~~~~~~~~~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v 111 (222)
.|..|..........++... .+++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.+++++..+++. ++
T Consensus 94 ~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~--~v 171 (315)
T 1ixk_A 94 EFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL--NV 171 (315)
T ss_dssp HHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC--SE
T ss_pred hHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--eE
Confidence 34444443333333333222 467899999999999999999875 3479999999999999999999988875 68
Q ss_pred eEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------------------------HHHHH
Q 047371 112 KLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------------------------LPQLA 166 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------------------------~~~~l 166 (222)
.+...|...+.. ..++||+|++++|+.. ...++
T Consensus 172 ~~~~~D~~~~~~----------------------~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L 229 (315)
T 1ixk_A 172 ILFHSSSLHIGE----------------------LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLL 229 (315)
T ss_dssp EEESSCGGGGGG----------------------GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHH
T ss_pred EEEECChhhccc----------------------ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHH
Confidence 888877655421 2457999999887532 14689
Q ss_pred HHHHHcccCCeEEEEec
Q 047371 167 DHIVSYAKPGAVVGISG 183 (222)
Q Consensus 167 ~~~~~~LkpgG~l~~~~ 183 (222)
+++.++|||||.+++++
T Consensus 230 ~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 230 EKGLEVLKPGGILVYST 246 (315)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHhCCCCCEEEEEe
Confidence 99999999999999864
No 104
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.55 E-value=6.7e-14 Score=123.53 Aligned_cols=138 Identities=22% Similarity=0.307 Sum_probs=102.9
Q ss_pred ceeEEeCCCcccccCCcchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcC
Q 047371 26 ATNIILNPGLAFGTGEHATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNN 105 (222)
Q Consensus 26 ~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~ 105 (222)
...+.++|+..| +.+......+...+.. ..++.+|||+|||+|.+++.+++.. .+|+|+|+++.+++.|++++..++
T Consensus 260 g~~f~~~~~~F~-q~n~~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ng 336 (425)
T 2jjq_A 260 DVDYLIHPNSFF-QTNSYQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINN 336 (425)
T ss_dssp TEEEEECTTSCC-CSBHHHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CEEEEEcccccc-ccCHHHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcC
Confidence 467778887544 3333344444444434 6778999999999999999999874 699999999999999999998887
Q ss_pred CCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHH-HHHHHHHcccCCeEEEEecC
Q 047371 106 IGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQ-LADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 106 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~-~l~~~~~~LkpgG~l~~~~~ 184 (222)
+. +.+...|...+. ..+||+|++++|...... +++.+. .|+|+|.+++++.
T Consensus 337 l~---v~~~~~d~~~~~------------------------~~~fD~Vv~dPPr~g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 337 VD---AEFEVASDREVS------------------------VKGFDTVIVDPPRAGLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp CC---EEEEECCTTTCC------------------------CTTCSEEEECCCTTCSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred Cc---EEEEECChHHcC------------------------ccCCCEEEEcCCccchHHHHHHHHH-hcCCCcEEEEECC
Confidence 63 788888775541 227999999999765444 566554 5999999999986
Q ss_pred CCCcHHHHHH
Q 047371 185 LSEQLPRIIN 194 (222)
Q Consensus 185 ~~~~~~~~~~ 194 (222)
+....+++..
T Consensus 389 p~tlarDl~~ 398 (425)
T 2jjq_A 389 PETFARDVKM 398 (425)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHhHHhh
Confidence 6555555543
No 105
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.55 E-value=1.7e-13 Score=109.81 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=75.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+.+.+... .++.+...|...... ..+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~~d~~~~~~-----~~~--- 122 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWK-----YSG--- 122 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGG-----TTT---
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEEcCCCCchh-----hcc---
Confidence 467899999999999999988875 4468999999999887766655432 256666665543200 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHH-HHHHHHHHcccCCeEEEEe
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLP-QLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~-~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++...+... .+++++.+.|||||.+++.
T Consensus 123 -----------~~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 123 -----------IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp -----------TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------cccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 236899999986443323 3589999999999999986
No 106
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.55 E-value=5.7e-14 Score=118.37 Aligned_cols=141 Identities=14% Similarity=0.100 Sum_probs=101.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh--cCCCCCceeEEecCCcccccccccccccch
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL--NNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++.. .++...++++...|+..+..
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~---------- 158 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR---------- 158 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG----------
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh----------
Confidence 45789999999999999999886 568999999999999999998754 33323478888887644310
Q ss_pred hccccccccCCCCCCCeeEEEeccccc--------cHHHHHHHHHHcccCCeEEEEecCC----CCcHHHHHHHHHhhhh
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLN--------PLPQLADHIVSYAKPGAVVGISGIL----SEQLPRIINRYSEFLE 201 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~~~~~~~ 201 (222)
...++||+|+++++.. ...++++.+.+.|||||.+++.... ......+.+.+.+.|.
T Consensus 159 -----------~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 227 (296)
T 1inl_A 159 -----------KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFP 227 (296)
T ss_dssp -----------GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCS
T ss_pred -----------hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCC
Confidence 0356799999987543 1367899999999999999996322 2334556666666665
Q ss_pred cceecc-------cCCceEeeccc
Q 047371 202 DILVSE-------KDDWRCVSGTK 218 (222)
Q Consensus 202 ~~~~~~-------~~~w~~~~~~k 218 (222)
.+.... .+.|..+.++|
T Consensus 228 ~v~~~~~~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 228 ITRVYLGFMTTYPSGMWSYTFASK 251 (296)
T ss_dssp EEEEEEEECTTSTTSEEEEEEEES
T ss_pred ceEEEEeecCccCCCceEEEEecC
Confidence 544322 56787776665
No 107
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.55 E-value=4e-14 Score=116.46 Aligned_cols=104 Identities=17% Similarity=0.241 Sum_probs=85.8
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++.+|||+|||+|..++.++.. +..+|+++|+++.+++.|++++..+++. ++++...+...+...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~--~v~~~~~d~~~~~~~----------- 145 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK--GARALWGRAEVLARE----------- 145 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEEECCHHHHTTS-----------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--ceEEEECcHHHhhcc-----------
Confidence 35789999999999999998875 6689999999999999999999988886 688988887654210
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
-...++||+|+++.. ..+..+++.+.++|||||++++.
T Consensus 146 --------~~~~~~fD~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 146 --------AGHREAYARAVARAV-APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp --------TTTTTCEEEEEEESS-CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred --------cccCCCceEEEECCc-CCHHHHHHHHHHHcCCCeEEEEE
Confidence 002478999999764 34788999999999999998874
No 108
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.55 E-value=7.3e-14 Score=118.13 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=86.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|+++....++. .++.+...|...+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------------- 152 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASIDTN-RSRQVLLQGWEDF------------- 152 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTSCCS-SCEEEEESCGGGC-------------
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECChHHC-------------
Confidence 457889999999999999998876 5 59999999999999999998877765 4688887765433
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
+ ++||+|+++.+++++ ..+++++.++|||||.+++.++..
T Consensus 153 -----------~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 153 -----------A-EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp -----------C-CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred -----------C-CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3 679999998877664 568999999999999999965543
No 109
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.55 E-value=9.2e-14 Score=115.73 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=83.8
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++..+++ ++.+...|...+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g-~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~--------------- 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG-YDVTSWDHNENSIAFLNETKEKENL---NISTALYDINAAN--------------- 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCGGGCC---------------
T ss_pred CCCcEEEECCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHHcCC---ceEEEEecccccc---------------
Confidence 78899999999999999999886 4999999999999999999988775 6778877765442
Q ss_pred cccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEe
Q 047371 138 SHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++.++++ ...+++.+.++|||||.+++.
T Consensus 181 --------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 181 --------IQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp --------CCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred --------ccCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3678999999988875 346899999999999997774
No 110
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.55 E-value=8.2e-14 Score=116.07 Aligned_cols=108 Identities=21% Similarity=0.211 Sum_probs=88.3
Q ss_pred hhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 54 SLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 54 ~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|+++....++. .++.+...|......
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~---------- 128 (298)
T 1ri5_A 60 LYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR-FKVFFRAQDSYGRHM---------- 128 (298)
T ss_dssp HHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS-SEEEEEESCTTTSCC----------
T ss_pred HhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC-ccEEEEECCcccccc----------
Confidence 335788999999999999999888887679999999999999999998877654 478888887754421
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-------HHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
.+.++||+|+++..+++ ...+++++.++|||||.+++..
T Consensus 129 -----------~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 129 -----------DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp -----------CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----------CCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 13568999999877754 3468999999999999999864
No 111
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.55 E-value=2.3e-14 Score=119.39 Aligned_cols=124 Identities=13% Similarity=0.064 Sum_probs=92.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.+++++...++. ++.+...|...+.... .
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~--~v~~~~~D~~~~~~~~-----~-- 151 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL--NTIIINADMRKYKDYL-----L-- 151 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCHHHHHHHH-----H--
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC--cEEEEeCChHhcchhh-----h--
Confidence 457899999999999999998874 3479999999999999999999988875 7888888765442100 0
Q ss_pred hccccccccCCCCCCCeeEEEecccccc---------------------HHHHHHHHHHcccCCeEEEEecC--C-CCcH
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP---------------------LPQLADHIVSYAKPGAVVGISGI--L-SEQL 189 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~--~-~~~~ 189 (222)
...++||+|++++|+.. ...+++.+.++|||||.+++++. . .++.
T Consensus 152 -----------~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene 220 (274)
T 3ajd_A 152 -----------KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE 220 (274)
T ss_dssp -----------HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSH
T ss_pred -----------hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhH
Confidence 01567999999987643 25689999999999999988633 2 2444
Q ss_pred HHHHHHHHhh
Q 047371 190 PRIINRYSEF 199 (222)
Q Consensus 190 ~~~~~~~~~~ 199 (222)
..+...++.+
T Consensus 221 ~~v~~~l~~~ 230 (274)
T 3ajd_A 221 EVIKYILQKR 230 (274)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 4444444443
No 112
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.55 E-value=7.9e-14 Score=109.65 Aligned_cols=138 Identities=15% Similarity=0.043 Sum_probs=97.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++..+|||+|||+|.++..++.. +..+|+|+|+|+.+++.++.++..++.. .++.+ .+.....
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~-~~v~~--~d~~~~~------------ 111 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT-IKYRF--LNKESDV------------ 111 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS-SEEEE--ECCHHHH------------
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ccEEE--ecccccC------------
Confidence 567889999999999999998765 5569999999999999999999988875 24555 4332211
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHH---HHHHHHHcccCCeEEEEec--C--------CCCcHHHHHHHHHhhhh
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQ---LADHIVSYAKPGAVVGISG--I--------LSEQLPRIINRYSEFLE 201 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~---~l~~~~~~LkpgG~l~~~~--~--------~~~~~~~~~~~~~~~~~ 201 (222)
+.++||+|++...+|.+.+ .+..+.+.|+|||+++... . .......+.+.+.+...
T Consensus 112 -----------~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~ 180 (200)
T 3fzg_A 112 -----------YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIK 180 (200)
T ss_dssp -----------TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSC
T ss_pred -----------CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcce
Confidence 6788999999999998854 4668999999999998743 1 12333444444444444
Q ss_pred cceecccCCceEeecccC
Q 047371 202 DILVSEKDDWRCVSGTKF 219 (222)
Q Consensus 202 ~~~~~~~~~w~~~~~~k~ 219 (222)
.++....+.=.....+|+
T Consensus 181 ~~~~~~~~nEl~y~~~~~ 198 (200)
T 3fzg_A 181 ILDSKVIGNELVYITSGF 198 (200)
T ss_dssp EEEEEEETTEEEEEECCC
T ss_pred eeeeeeeCceEEEEEecc
Confidence 444444443333344443
No 113
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.54 E-value=3.7e-14 Score=114.64 Aligned_cols=122 Identities=13% Similarity=0.204 Sum_probs=94.3
Q ss_pred chhHHHHHHHHhhhc--CCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC
Q 047371 43 ATTKLCLLLLQSLIK--GGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD 118 (222)
Q Consensus 43 ~~~~~~~~~l~~~~~--~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~ 118 (222)
+.....+..+....+ ++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...++..+++++..+++
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda 118 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP 118 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH
Confidence 333444444444322 2349999999999999999874 357999999999999999999998887534788988876
Q ss_pred cccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 119 RTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+.. .+ +.++||+|+++.....+..+++.+.++|||||++++...
T Consensus 119 ~~~l~-------~~-------------~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 119 LDVMS-------RL-------------ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HHHGG-------GS-------------CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHH-------Hh-------------cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 54311 00 357899999998888888999999999999999999544
No 114
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=2.6e-14 Score=116.45 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=81.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..+|.+|||+|||+|..+..+++....+++++|+++.+++.|+++....+. ++.+...+..... ..+
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~---~~~~~~~~a~~~~-------~~~--- 124 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH---KVIPLKGLWEDVA-------PTL--- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS---EEEEEESCHHHHG-------GGS---
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC---ceEEEeehHHhhc-------ccc---
Confidence 467899999999999999999887657899999999999999998876653 5677776654331 111
Q ss_pred cccccccCCCCCCCeeEEEeccccc-----c---HHHHHHHHHHcccCCeEEEEe
Q 047371 136 LSSHEIRGISETEEYDVVIANILLN-----P---LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~-----~---~~~~l~~~~~~LkpgG~l~~~ 182 (222)
++++||.|+.+.... + ...+++++.|+|||||++.+.
T Consensus 125 ----------~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 125 ----------PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp ----------CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ----------cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 677899998765432 1 456899999999999999874
No 115
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.54 E-value=6.8e-14 Score=118.21 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=78.2
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC----CceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP----KKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++....+... -++++...+...-.. ...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~-----~~~-- 120 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTF-----VSS-- 120 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSH-----HHH--
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchh-----hhh--
Confidence 478999999999986666666656799999999999999999876554320 024455554411000 000
Q ss_pred hccccccccCCCCCCCeeEEEecccccc------HHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP------LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+....+.++||+|+|...+++ ...++++++++|||||+++++..
T Consensus 121 -------l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 121 -------VREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp -------HHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------hhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 000014678999999776643 46789999999999999998654
No 116
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.54 E-value=9.6e-14 Score=118.59 Aligned_cols=143 Identities=17% Similarity=0.221 Sum_probs=99.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CC-CEEEEEeCChHHHHHHHHHHHhcC-------CC--CCceeEEecCCcccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GA-AMFVGVDIDPQVIKSAHQNAALNN-------IG--PKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~-------~~--~~~v~~~~~~~~~~~~~ 124 (222)
+.++.+|||+|||+|.++..+++. +. .+++++|+++.+++.|++++...+ +. ..++++...|......
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~- 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE- 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc-
Confidence 568899999999999999999875 43 799999999999999999987532 21 1378888887754310
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh---h-
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF---L- 200 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~---~- 200 (222)
++ +.++||+|+++.+.. ..+++++.++|||||.+++......+..++.+.+... +
T Consensus 182 ------~~-------------~~~~fD~V~~~~~~~--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~ 240 (336)
T 2b25_A 182 ------DI-------------KSLTFDAVALDMLNP--HVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALS 240 (336)
T ss_dssp -------------------------EEEEEECSSST--TTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEE
T ss_pred ------cc-------------CCCCeeEEEECCCCH--HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcc
Confidence 01 355799999987543 3478999999999999998766666666666666542 2
Q ss_pred -hcceecccCCceEeecccCC
Q 047371 201 -EDILVSEKDDWRCVSGTKFS 220 (222)
Q Consensus 201 -~~~~~~~~~~w~~~~~~k~~ 220 (222)
........+.|..+.++|+.
T Consensus 241 ~~~~~~~~~~~w~~~~~~~~~ 261 (336)
T 2b25_A 241 CEKISEVIVRDWLVCLAKQKN 261 (336)
T ss_dssp EEEEECCCCCCEEECC-----
T ss_pred cceEEEecccceEEEeecccc
Confidence 12234456889888766543
No 117
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.54 E-value=2.4e-13 Score=108.12 Aligned_cols=99 Identities=14% Similarity=0.196 Sum_probs=82.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++ .+. .++.+...|...+ .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~----~~~--~~~~~~~~d~~~~-~------------ 103 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAEMIAEAGR----HGL--DNVEFRQQDLFDW-T------------ 103 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHGG----GCC--TTEEEEECCTTSC-C------------
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHh----cCC--CCeEEEecccccC-C------------
Confidence 4567899999999999999998885 699999999999999987 333 3788888877544 1
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++..+++. ..+++++.++|||||.+++.+.
T Consensus 104 ----------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 104 ----------PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp ----------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 67889999999888763 5679999999999999998644
No 118
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=9.3e-14 Score=119.59 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=86.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++. .++++...+...+..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~-~~v~~~~~d~~~~~~------------ 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLD-HVVTIIKGKVEEVEL------------ 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT-TTEEEEESCTTTCCC------------
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCC-CcEEEEECcHHHccC------------
Confidence 457899999999999999999998878999999995 999999999988886 469999998876532
Q ss_pred cccccccCCCCCCCeeEEEeccccc------cHHHHHHHHHHcccCCeEEEE
Q 047371 136 LSSHEIRGISETEEYDVVIANILLN------PLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 181 (222)
+.++||+|+++.+.+ ....++..+.++|||||.++.
T Consensus 130 ----------~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 130 ----------PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ----------SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ----------CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 567899999976432 256788999999999999874
No 119
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.53 E-value=2.1e-13 Score=110.34 Aligned_cols=140 Identities=13% Similarity=0.069 Sum_probs=95.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++..+ .++.+...|...... ...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~~~~~~-----~~~--- 139 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDANKPQE-----YAN--- 139 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCTTCGGG-----GTT---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCCCCccc-----ccc---
Confidence 457889999999999999999876 5579999999999999999887544 378888887754200 000
Q ss_pred ccccccccCCCCCCCeeEEEecccccc-HHHHHHHHHHcccCCeEEEEe----cCCCC------cHHHHHHHHHh-hhhc
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNP-LPQLADHIVSYAKPGAVVGIS----GILSE------QLPRIINRYSE-FLED 202 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~----~~~~~------~~~~~~~~~~~-~~~~ 202 (222)
..++||+|+.+.+-.. ...+++++.+.|||||.+++. +.... ..+++. .+.+ +|..
T Consensus 140 -----------~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~ 207 (230)
T 1fbn_A 140 -----------IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKI 207 (230)
T ss_dssp -----------TSCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEE
T ss_pred -----------cCccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEE
Confidence 1267999997643322 356799999999999999985 11111 114444 4444 3655
Q ss_pred ceecccCC----ceEeecccC
Q 047371 203 ILVSEKDD----WRCVSGTKF 219 (222)
Q Consensus 203 ~~~~~~~~----w~~~~~~k~ 219 (222)
++...... +..+.++|+
T Consensus 208 ~~~~~~~~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 208 VDEVDIEPFEKDHVMFVGIWE 228 (230)
T ss_dssp EEEEECTTTSTTEEEEEEEEC
T ss_pred EEEEccCCCccceEEEEEEeC
Confidence 55443333 455666654
No 120
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.53 E-value=2e-13 Score=111.15 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=81.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++||++|||+|||+|.++..+++. +.++|+|+|+++.+++.+++++...+ ++..+..+...... .+.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V~~d~~~p~~------~~~- 143 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPILGDARFPEK------YRH- 143 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEEESCTTCGGG------GTT-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEEEEeccCccc------ccc-
Confidence 689999999999999999999985 56899999999999999988765432 67777666544311 000
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-HHHHHHHHHHcccCCeEEEEe
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~ 182 (222)
..+.+|+|+++.+... ...++.++.+.|||||.++++
T Consensus 144 ------------~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 144 ------------LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp ------------TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 4567999998776654 345789999999999999985
No 121
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=6.4e-14 Score=114.69 Aligned_cols=101 Identities=20% Similarity=0.323 Sum_probs=84.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++ .... .++.+...+...+..
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~-~~~~--~~~~~~~~d~~~~~~------------ 100 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKI-AGVD--RKVQVVQADARAIPL------------ 100 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHT-TTSC--TTEEEEESCTTSCCS------------
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh-hccC--CceEEEEcccccCCC------------
Confidence 4678899999999999999998874 68999999999999999887 2222 378888888765432
Q ss_pred cccccccCCCCCCCeeEEEeccccccH---HHHHHHHHHcccCCeEEEEe
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL---PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~ 182 (222)
++++||+|+++..+++. ..+++++.++|||||.+++.
T Consensus 101 ----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 101 ----------PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ----------CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 56789999999888764 67899999999999999986
No 122
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.53 E-value=7.7e-14 Score=113.77 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=88.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh------cCCCCCceeEEecCCcc-ccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL------NNIGPKKIKLHLVPDRT-FTASMNE 127 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~------~~~~~~~v~~~~~~~~~-~~~~~~~ 127 (222)
..++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++.. .++ .++.+...|+.. +.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~--~nv~~~~~d~~~~l~----- 116 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF--QNIACLRSNAMKHLP----- 116 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC--TTEEEEECCTTTCHH-----
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC--CeEEEEECcHHHhhh-----
Confidence 346778999999999999998875 567999999999999999987653 233 378898888754 21
Q ss_pred ccccchhccccccccCCCCCCCeeEEEeccccccH-----------HHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHH
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-----------PQLADHIVSYAKPGAVVGISGILSEQLPRIINRY 196 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 196 (222)
.+.+.++||.|+++.+-.+. ..+++.+.++|||||.+++..........+.+.+
T Consensus 117 ---------------~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l 181 (235)
T 3ckk_A 117 ---------------NFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHF 181 (235)
T ss_dssp ---------------HHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHH
T ss_pred ---------------hhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHH
Confidence 00156789999987654321 4689999999999999998654444444445555
Q ss_pred Hhh
Q 047371 197 SEF 199 (222)
Q Consensus 197 ~~~ 199 (222)
...
T Consensus 182 ~~~ 184 (235)
T 3ckk_A 182 EEH 184 (235)
T ss_dssp HTS
T ss_pred HHC
Confidence 443
No 123
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.53 E-value=7.3e-14 Score=110.65 Aligned_cols=104 Identities=19% Similarity=0.213 Sum_probs=81.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|..+..++.....+++|+|+++.+++.|++++...+. ++.+...+...+..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~------------ 85 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF---KLNISKGDIRKLPF------------ 85 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC---CCCEEECCTTSCCS------------
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC---ceEEEECchhhCCC------------
Confidence 456889999999999875443333346999999999999999998876552 57777777755432
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++.++++. ..+++++.++|||||.+++..+
T Consensus 86 ----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 86 ----------KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp ----------CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 56789999998776654 4579999999999999998643
No 124
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.53 E-value=6e-14 Score=116.67 Aligned_cols=122 Identities=24% Similarity=0.264 Sum_probs=96.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhc-CCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALN-NIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++..+ +.. ++.+...|.... .
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~--~v~~~~~d~~~~-~--------- 175 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIG--NVRTSRSDIADF-I--------- 175 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCT--TEEEECSCTTTC-C---------
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCC--cEEEEECchhcc-C---------
Confidence 457889999999999999998875 4579999999999999999999877 643 788888776442 1
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcce
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDIL 204 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (222)
+.++||+|+++.+- ...+++.+.+.|||||.+++.+....+..++.+.+.+. |..++
T Consensus 176 -------------~~~~fD~Vi~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 176 -------------SDQMYDAVIADIPD--PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp -------------CSCCEEEEEECCSC--GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEE
T ss_pred -------------cCCCccEEEEcCcC--HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 45689999997652 45789999999999999999876665666777766653 44333
No 125
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.53 E-value=8.1e-14 Score=110.74 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=86.6
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
....++.....++.+|||+|||+|.++..+ +..+++|+|+++.+++.|+++. .++.+...+...+..
T Consensus 25 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~--- 91 (211)
T 2gs9_A 25 EEERALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWGEALPF--- 91 (211)
T ss_dssp HHHHHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCTTSCCS---
T ss_pred HHHHHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcccccCCC---
Confidence 344566666668899999999999998877 4448999999999999998875 256677777655432
Q ss_pred cccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecCCCC
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGILSE 187 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~ 187 (222)
+.++||+|+++..+++ ...+++++.++|||||.+++......
T Consensus 92 -------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 92 -------------------PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp -------------------CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -------------------CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 5678999999888776 46789999999999999999765443
No 126
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=1.3e-13 Score=112.79 Aligned_cols=123 Identities=17% Similarity=0.187 Sum_probs=97.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhc-CCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALN-NIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.|++++..+ +. .++.+...|......
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~~~~--------- 162 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV--ENVRFHLGKLEEAEL--------- 162 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC--CCEEEEESCGGGCCC---------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCEEEEECchhhcCC---------
Confidence 567899999999999999998876 4 579999999999999999998876 63 478888877654311
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcce
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDIL 204 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (222)
+.++||+|+++++- ...+++++.++|+|||.+++......+..++.+.+.+. |..++
T Consensus 163 -------------~~~~~D~v~~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 163 -------------EEAAYDGVALDLME--PWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp -------------CTTCEEEEEEESSC--GGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEE
T ss_pred -------------CCCCcCEEEECCcC--HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEE
Confidence 45689999997653 35789999999999999999866666667777777654 44333
No 127
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.52 E-value=1.1e-13 Score=120.61 Aligned_cols=117 Identities=14% Similarity=0.109 Sum_probs=87.7
Q ss_pred HHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHH-------HhcCCCCCceeEEecCC
Q 047371 48 CLLLLQSL-IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNA-------ALNNIGPKKIKLHLVPD 118 (222)
Q Consensus 48 ~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~-------~~~~~~~~~v~~~~~~~ 118 (222)
+..++... ++++.+|||+|||+|.+++.++.. +..+++|+|+++.+++.|+++. ...++...++.+..+|+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~ 241 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence 34444433 578999999999999999988864 5557999999999999998754 34565334899999998
Q ss_pred cccccccccccccchhccccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEecC
Q 047371 119 RTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
....+. . ....||+|++|.++.. ....+.++.+.|||||.+++...
T Consensus 242 ~~lp~~-----d---------------~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 242 LSEEWR-----E---------------RIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp TSHHHH-----H---------------HHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred cCCccc-----c---------------ccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 665320 0 0136999999887643 44567889999999999999644
No 128
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.52 E-value=1.1e-13 Score=111.87 Aligned_cols=107 Identities=12% Similarity=0.048 Sum_probs=84.6
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
.+.+.+... .++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++... ++.+...+...+.
T Consensus 32 ~~~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~d~~~~~---- 99 (250)
T 2p7i_A 32 FMVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHF-NDITCVEASEEAISHAQGRLKD------GITYIHSRFEDAQ---- 99 (250)
T ss_dssp HHHHHHGGG-CCSSCEEEESCTTSHHHHHHTTTC-SCEEEEESCHHHHHHHHHHSCS------CEEEEESCGGGCC----
T ss_pred HHHHHHHhh-cCCCcEEEECCCCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhhhC------CeEEEEccHHHcC----
Confidence 344444332 367899999999999999998875 4899999999999999987532 5677777664431
Q ss_pred cccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHH-HcccCCeEEEEecC
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIV-SYAKPGAVVGISGI 184 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~-~~LkpgG~l~~~~~ 184 (222)
++++||+|++...+++ ...+++++. ++|||||.+++...
T Consensus 100 -------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 100 -------------------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp -------------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -------------------cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 5678999999888876 456899999 99999999999654
No 129
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.52 E-value=1.6e-13 Score=111.06 Aligned_cols=109 Identities=16% Similarity=0.236 Sum_probs=89.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
..++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++...++. .++.+...+...... .
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~--------~-- 120 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE-SRIELLFGDALQLGE--------K-- 120 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT-TTEEEECSCGGGSHH--------H--
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECCHHHHHH--------h--
Confidence 347889999999999999998876 4579999999999999999999888875 368888777644210 0
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
....++||+|+++.+...+..+++.+.++|+|||.+++..+
T Consensus 121 ---------~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 121 ---------LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp ---------HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred ---------cccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 00146899999999888888999999999999999999754
No 130
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=2.2e-13 Score=113.10 Aligned_cols=100 Identities=24% Similarity=0.263 Sum_probs=82.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++. ..+++|+|+++.+++.|+++. .++.+...+...+.
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~------------- 113 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY-------PHLHFDVADARNFR------------- 113 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC-------TTSCEEECCTTTCC-------------
T ss_pred CCCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC-------CCCEEEECChhhCC-------------
Confidence 357889999999999999999884 579999999999999998764 25667777775542
Q ss_pred cccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecCCC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
..++||+|+++.++++ ...+++++.++|||||.+++.....
T Consensus 114 ----------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 114 ----------VDKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp ----------CSSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ----------cCCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 3468999999988876 4578999999999999999865443
No 131
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.52 E-value=2.4e-13 Score=110.48 Aligned_cols=118 Identities=18% Similarity=0.233 Sum_probs=93.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+.++.+|||+|||+|.++..+++. ..+++++|+++.+++.|+++....++. .++.+...+......
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~------------ 154 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLG-KNVKFFNVDFKDAEV------------ 154 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCC-TTEEEECSCTTTSCC------------
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-CcEEEEEcChhhccc------------
Confidence 357889999999999999999888 679999999999999999999887764 377787776644310
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
+.++||+|+++++ ....+++++.++|+|||.+++......+..++.+.+...
T Consensus 155 ----------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 155 ----------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp ----------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred ----------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 3457999999875 245788999999999999999766555666666665543
No 132
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.51 E-value=2.2e-13 Score=107.46 Aligned_cols=101 Identities=21% Similarity=0.193 Sum_probs=81.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++++ +|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++....+. ++.+...+...+..
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~------------ 90 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG-YEVTAVDQSSVGLAKAKQLAQEKGV---KITTVQSNLADFDI------------ 90 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT-CEEEEECSSHHHHHHHHHHHHHHTC---CEEEECCBTTTBSC------------
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCC---ceEEEEcChhhcCC------------
Confidence 4567 99999999999999998875 5999999999999999999876654 57777777654422
Q ss_pred cccccccCCCCCCCeeEEEeccccc---cHHHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIANILLN---PLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.... ....+++.+.++|||||.+++..
T Consensus 91 ----------~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 91 ----------VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp ----------CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred ----------CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 467899999964332 24568999999999999999964
No 133
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.51 E-value=7.7e-14 Score=117.07 Aligned_cols=108 Identities=27% Similarity=0.329 Sum_probs=78.7
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCC-----------------------------
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIG----------------------------- 107 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------------------------- 107 (222)
++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5889999999999999998875 5679999999999999999987654321
Q ss_pred ---------------------------CCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc
Q 047371 108 ---------------------------PKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN 160 (222)
Q Consensus 108 ---------------------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~ 160 (222)
..++.+...|...... ...+ ...++||+|+|..+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~----~~~~-------------~~~~~fD~I~~~~vl~ 188 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD----DLVE-------------AQTPEYDVVLCLSLTK 188 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSH----HHHT-------------TCCCCEEEEEEESCHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCcc----cccc-------------ccCCCcCEEEEChHHH
Confidence 0256666665532210 0000 1467899999988774
Q ss_pred c---------HHHHHHHHHHcccCCeEEEEe
Q 047371 161 P---------LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 161 ~---------~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+ ...+++++.++|||||++++.
T Consensus 189 ~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 189 WVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 3 345899999999999999995
No 134
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.51 E-value=1.3e-13 Score=115.24 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=101.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc--CC-------CCCceeEEecCCcccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN--NI-------GPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~-------~~~~v~~~~~~~~~~~~~~~ 126 (222)
.+++.+|||+|||+|.++..+++.+..+++++|+++.+++.|++++ .. ++ ...++++...|+..+..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--- 148 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK--- 148 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH---
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc---
Confidence 3567899999999999999998776679999999999999999987 33 32 23578888877643310
Q ss_pred cccccchhccccccccCCCCCCCeeEEEecccccc-------HHHHHHHHHHcccCCeEEEEec-CC---CCcHHHHHHH
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHIVSYAKPGAVVGISG-IL---SEQLPRIINR 195 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~-~~---~~~~~~~~~~ 195 (222)
..++||+|+++++... ..++++.+.+.|+|||.+++.. .. ......+.+.
T Consensus 149 -------------------~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~ 209 (281)
T 1mjf_A 149 -------------------NNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKE 209 (281)
T ss_dssp -------------------HCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHH
T ss_pred -------------------ccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHH
Confidence 1457999999876421 3678999999999999999852 12 2233455555
Q ss_pred HHhhhhcceecc------cCCceEeecccC
Q 047371 196 YSEFLEDILVSE------KDDWRCVSGTKF 219 (222)
Q Consensus 196 ~~~~~~~~~~~~------~~~w~~~~~~k~ 219 (222)
+...|....... .+.|..+.++|.
T Consensus 210 l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 210 MKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 555554443321 478887777664
No 135
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.51 E-value=1.8e-13 Score=113.50 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=94.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhc-C-CCCCceeEEecCCccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALN-N-IGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~-~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
+.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... + +. .++.+...|......
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~-~~v~~~~~d~~~~~~-------- 167 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP-DNWRLVVSDLADSEL-------- 167 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC-TTEEEECSCGGGCCC--------
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC-CcEEEEECchHhcCC--------
Confidence 567899999999999999998874 3579999999999999999998776 4 22 378888777654321
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHh
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSE 198 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 198 (222)
+.++||+|+++.+ ....+++++.++|+|||.+++......+..++.+.+..
T Consensus 168 --------------~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 168 --------------PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRA 218 (280)
T ss_dssp --------------CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred --------------CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4568999999765 24578999999999999999987666677777777765
No 136
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.51 E-value=1.7e-13 Score=115.80 Aligned_cols=113 Identities=15% Similarity=0.024 Sum_probs=85.1
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCC-----CCCceeEEecCCccccccccccccc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNI-----GPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
+++.+|||+|||+|..+..+++.+..+++|+|+++.+++.|+++....+. ...++.+...|...... ..+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~ 107 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELL-----IDK 107 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCS-----TTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccch-----hhh
Confidence 36889999999999999988877667999999999999999998765421 11367888887765420 000
Q ss_pred chhccccccccCCC-CCCCeeEEEeccccccH-------HHHHHHHHHcccCCeEEEEecCCC
Q 047371 132 VVEYLSSHEIRGIS-ETEEYDVVIANILLNPL-------PQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 132 ~~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
+. +.++||+|+++..+++. ..++.++.++|||||.++++....
T Consensus 108 ------------~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 108 ------------FRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp ------------CSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ------------cccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 00 24589999999888654 468999999999999999975543
No 137
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.51 E-value=2.5e-13 Score=116.55 Aligned_cols=101 Identities=29% Similarity=0.330 Sum_probs=84.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++. .++++...+...+..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~------------ 127 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLE-DTITLIKGKIEEVHL------------ 127 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCT-TTEEEEESCTTTSCC------------
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCC-CcEEEEEeeHHHhcC------------
Confidence 457889999999999999999988767999999997 999999999888875 488999888765532
Q ss_pred cccccccCCCCCCCeeEEEeccc---cc---cHHHHHHHHHHcccCCeEEE
Q 047371 136 LSSHEIRGISETEEYDVVIANIL---LN---PLPQLADHIVSYAKPGAVVG 180 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~---~~---~~~~~l~~~~~~LkpgG~l~ 180 (222)
+.++||+|+++.. +. .+..++..+.+.|||||.++
T Consensus 128 ----------~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 ----------PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ----------SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ----------CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 4578999999873 21 14568899999999999987
No 138
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=3e-13 Score=110.56 Aligned_cols=109 Identities=16% Similarity=0.202 Sum_probs=86.3
Q ss_pred HHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccc
Q 047371 46 KLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTA 123 (222)
Q Consensus 46 ~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~ 123 (222)
.....++... ..++.+|||+|||+|.++..+++. +..+++|+|+++.+++.++++. .++.+...|...+.
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~- 91 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-------PNTNFGKADLATWK- 91 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-------TTSEEEECCTTTCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------CCcEEEECChhhcC-
Confidence 3344455444 456789999999999999988875 4578999999999999998871 26778887765441
Q ss_pred ccccccccchhccccccccCCCCCCCeeEEEeccccccH---HHHHHHHHHcccCCeEEEEecC
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL---PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++.++++. ..+++++.++|||||.+++...
T Consensus 92 ----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 92 ----------------------PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp ----------------------CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ----------------------ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 45689999999888764 5689999999999999999753
No 139
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.51 E-value=2.1e-13 Score=113.39 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=96.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.|++++...++. .++.+...|.... .
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~---------- 177 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI-ERVTIKVRDISEG-F---------- 177 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG-GGEEEECCCGGGC-C----------
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-CCEEEEECCHHHc-c----------
Confidence 457889999999999999998876 3 579999999999999999999887763 3677877765432 1
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcce
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDIL 204 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (222)
+.++||+|+++++. ...+++.+.++|+|||.+++......+..++.+.+.+. |..++
T Consensus 178 ------------~~~~~D~V~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 178 ------------DEKDVDALFLDVPD--PWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp ------------SCCSEEEEEECCSC--GGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEE
T ss_pred ------------cCCccCEEEECCcC--HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeE
Confidence 45689999998754 35788999999999999999866556667777776653 44333
No 140
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.51 E-value=1.6e-13 Score=111.43 Aligned_cols=99 Identities=21% Similarity=0.208 Sum_probs=78.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|+++ +.+...+...+. .++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~----------~~~~~~d~~~~~-------~~~--- 97 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEG-IESIGVDINEDMIKFCEGK----------FNVVKSDAIEYL-------KSL--- 97 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHT-CCEEEECSCHHHHHHHHTT----------SEEECSCHHHHH-------HTS---
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCC-CcEEEEECCHHHHHHHHhh----------cceeeccHHHHh-------hhc---
Confidence 4578999999999999999998875 5799999999999999875 335555443320 011
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
++++||+|+++..++++ ..+++++.++|||||.+++....
T Consensus 98 ----------~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 98 ----------PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp ----------CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred ----------CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 56889999998888763 57899999999999999996543
No 141
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.51 E-value=1.6e-13 Score=113.58 Aligned_cols=113 Identities=16% Similarity=0.080 Sum_probs=81.9
Q ss_pred HHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc-cccc
Q 047371 47 LCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT-FTAS 124 (222)
Q Consensus 47 ~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~-~~~~ 124 (222)
....++... ++++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++.... +.....+... ..
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g-~~V~gvD~S~~ml~~Ar~~~~~~~-----v~~~~~~~~~~~~-- 104 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERG-ASVTVFDFSQRMCDDLAEALADRC-----VTIDLLDITAEIP-- 104 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTSSSC-----CEEEECCTTSCCC--
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHhcc-----ceeeeeecccccc--
Confidence 334444433 5678999999999999999999886 689999999999999999875431 2222222211 00
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecCCCC
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGILSE 187 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~ 187 (222)
....++||+|+++.++++ ....+..+.++| |||.+++++....
T Consensus 105 -------------------~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 105 -------------------KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp -------------------GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred -------------------cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 002568999999988765 345789999999 9999999865443
No 142
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.50 E-value=2.4e-13 Score=115.42 Aligned_cols=143 Identities=17% Similarity=0.171 Sum_probs=103.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh--cC-CCCCceeEEecCCccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL--NN-IGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~-~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++.. .+ +...++++...|+..+..
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~-------- 146 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE-------- 146 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH--------
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH--------
Confidence 356789999999999999999876 467999999999999999998754 22 223478888887654310
Q ss_pred chhccccccccCCCCCCCeeEEEecccccc----------HHHHHHHHHHcccCCeEEEEecC-----CCCcHHHHHHHH
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNP----------LPQLADHIVSYAKPGAVVGISGI-----LSEQLPRIINRY 196 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~----------~~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~~~ 196 (222)
. ..++||+|+++.+.+. ...+++.+.+.|||||.+++... .......+.+.+
T Consensus 147 ~-------------~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l 213 (314)
T 1uir_A 147 R-------------TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTV 213 (314)
T ss_dssp H-------------CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHH
T ss_pred h-------------cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHH
Confidence 0 3568999999876543 46889999999999999998521 124456666777
Q ss_pred Hhhhhcceec------ccCCceEeecccC
Q 047371 197 SEFLEDILVS------EKDDWRCVSGTKF 219 (222)
Q Consensus 197 ~~~~~~~~~~------~~~~w~~~~~~k~ 219 (222)
...|...... ..+.|..+.++|.
T Consensus 214 ~~~F~~v~~~~~~vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 214 REAFRYVRSYKNHIPGFFLNFGFLLASDA 242 (314)
T ss_dssp HTTCSEEEEEEEEEGGGTEEEEEEEEESS
T ss_pred HHHCCceEEEEEecCCCCCeEEEEEEECC
Confidence 7666544322 2457876666653
No 143
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.50 E-value=9.2e-14 Score=115.91 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=81.1
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC--CceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP--KKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++....+... .++.+...+...+..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~----------- 123 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK----------- 123 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH-----------
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc-----------
Confidence 467899999999999999999886 499999999999999998764433221 245566665544320
Q ss_pred ccccccccCCCCCCCeeEEEec-ccccc----------HHHHHHHHHHcccCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIAN-ILLNP----------LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~-~~~~~----------~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
.+.+.++||+|+++ ..+++ ...+++++.++|||||++++..
T Consensus 124 --------~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 124 --------DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp --------HSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --------ccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 00156789999997 56644 4568999999999999999864
No 144
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.50 E-value=3.6e-13 Score=107.29 Aligned_cols=105 Identities=14% Similarity=0.144 Sum_probs=86.4
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++. .++++...+......
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~----------- 122 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI-DRVELQVGDPLGIAA----------- 122 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG-GGEEEEESCHHHHHT-----------
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-ceEEEEEecHHHHhc-----------
Confidence 36789999999999999999875 3 579999999999999999999887764 468888877643210
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ..+ ||+|+++.....+..+++.+.++|||||++++...
T Consensus 123 --------~--~~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 123 --------G--QRD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp --------T--CCS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred --------c--CCC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 0 235 99999988777788999999999999999998543
No 145
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.50 E-value=1.5e-13 Score=111.27 Aligned_cols=99 Identities=19% Similarity=0.299 Sum_probs=81.7
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|+++... .++.+...+...+..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~-------------- 103 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-----TGITYERADLDKLHL-------------- 103 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCGGGCCC--------------
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcChhhccC--------------
Confidence 6889999999999999999888655999999999999999887542 257777777654421
Q ss_pred cccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 138 SHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.++++ ...+++++.++|||||.+++..
T Consensus 104 --------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 --------PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp --------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 5678999999888766 4678999999999999999853
No 146
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.50 E-value=3.3e-13 Score=114.07 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=102.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh--cCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL--NNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++.. .+....++++...|...+.. .
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~-------~- 164 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR-------Q- 164 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH-------S-
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH-------h-
Confidence 356789999999999999999876 457999999999999999998742 12223478888887654421 0
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccH-------HHHHHHHHHcccCCeEEEEecCC----CCcHHHHHHHHHhh-h
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPL-------PQLADHIVSYAKPGAVVGISGIL----SEQLPRIINRYSEF-L 200 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~~~~~-~ 200 (222)
...++||+|+++.+.... ..+++.+.++|||||.+++.... .....++.+.+.+. |
T Consensus 165 ------------~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF 232 (304)
T 3bwc_A 165 ------------TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGF 232 (304)
T ss_dssp ------------SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTC
T ss_pred ------------ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCC
Confidence 025689999998765331 57899999999999999985322 13445666677666 6
Q ss_pred hcceec-------ccCCceEeecccC
Q 047371 201 EDILVS-------EKDDWRCVSGTKF 219 (222)
Q Consensus 201 ~~~~~~-------~~~~w~~~~~~k~ 219 (222)
..+... ..+.|.-+.++|.
T Consensus 233 ~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 233 ASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp SEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred CcEEEEEeecccccCcceEEEEEeCC
Confidence 554332 3578877776664
No 147
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.50 E-value=3.3e-13 Score=112.58 Aligned_cols=103 Identities=17% Similarity=0.277 Sum_probs=85.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++.+|||+|||+|.++..+++. + ..+++|+|+++.+++.|++++...+. ++.+...|...+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~----------- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY---DSEFLEGDATEIE----------- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS---EEEEEESCTTTCC-----------
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC---ceEEEEcchhhcC-----------
Confidence 356889999999999999998875 3 37999999999999999999876553 7888888876542
Q ss_pred hccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|+++..+++ ...+++++.++|||||.+++...
T Consensus 86 ------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 86 ------------LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp ------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ------------cCCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 2468999999888776 46789999999999999998643
No 148
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.50 E-value=2.2e-13 Score=110.19 Aligned_cols=107 Identities=19% Similarity=0.251 Sum_probs=85.4
Q ss_pred HHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc
Q 047371 48 CLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 48 ~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 127 (222)
....+...++++.+|||+|||+|.++..+++. .+++|+|+++.+++.|+++....+ .++.+...+...+.
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~----- 92 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDMRELE----- 92 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCGGGCC-----
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcChhhcC-----
Confidence 44455566778899999999999999988877 699999999999999999887655 25777777765432
Q ss_pred ccccchhccccccccCCCCCCCeeEEEecc-ccccH------HHHHHHHHHcccCCeEEEEe
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANI-LLNPL------PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~-~~~~~------~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++. +++++ ..+++++.++|||||.+++.
T Consensus 93 ------------------~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 93 ------------------LPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ------------------CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------------CCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 236899999975 55543 45799999999999999984
No 149
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.50 E-value=1.3e-13 Score=111.29 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=91.5
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCc-ccc
Q 047371 44 TTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDR-TFT 122 (222)
Q Consensus 44 ~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~-~~~ 122 (222)
...++..++....+++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++. .++.+...|.. .++
T Consensus 34 ~~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~ 105 (226)
T 3m33_A 34 PELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELLKLARANA-------PHADVYEWNGKGELP 105 (226)
T ss_dssp TTHHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHC-------TTSEEEECCSCSSCC
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhC-------CCceEEEcchhhccC
Confidence 3445555555556789999999999999999999885 69999999999999999871 26778888773 332
Q ss_pred cccccccccchhccccccccCCCC-CCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHh
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISE-TEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSE 198 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 198 (222)
. + .++||+|+++. ....+++++.++|||||.++.. .......++.+.+..
T Consensus 106 ~----------------------~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~l~~ 156 (226)
T 3m33_A 106 A----------------------GLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFLYV-GPRLNVPEVPERLAA 156 (226)
T ss_dssp T----------------------TCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEEEE-ESSSCCTHHHHHHHH
T ss_pred C----------------------cCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEEEe-CCcCCHHHHHHHHHH
Confidence 1 3 67899999983 3557888999999999999843 223344566666655
No 150
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.50 E-value=1.5e-13 Score=112.56 Aligned_cols=132 Identities=15% Similarity=0.135 Sum_probs=93.0
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC---------------------------C
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP---------------------------K 109 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---------------------------~ 109 (222)
.++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|++++...+... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 3567999999999999998887765689999999999999998875432100 0
Q ss_pred ce-eEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc----c---HHHHHHHHHHcccCCeEEEE
Q 047371 110 KI-KLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN----P---LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 110 ~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~----~---~~~~l~~~~~~LkpgG~l~~ 181 (222)
++ .+...+...... ..+. ..++||+|+++..++ + ...+++++.++|||||.+++
T Consensus 135 ~v~~~~~~d~~~~~~-----~~~~-------------~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 196 (265)
T 2i62_A 135 AIKQVLKCDVTQSQP-----LGGV-------------SLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVM 196 (265)
T ss_dssp HEEEEEECCTTSSST-----TTTC-------------CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hheeEEEeeeccCCC-----CCcc-------------ccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Confidence 25 676666644310 0000 227899999988877 3 55689999999999999998
Q ss_pred ecCC---------------CCcHHHHHHHHHhh-hhcceec
Q 047371 182 SGIL---------------SEQLPRIINRYSEF-LEDILVS 206 (222)
Q Consensus 182 ~~~~---------------~~~~~~~~~~~~~~-~~~~~~~ 206 (222)
.... .-...++.+.+... |..+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 197 VDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 6432 12445777777664 6555543
No 151
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.50 E-value=3.2e-13 Score=110.43 Aligned_cols=109 Identities=17% Similarity=0.085 Sum_probs=83.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhc--------CCCCCceeEEecCCcccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALN--------NIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
.+++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.|++++..+ ++. ++.+...|+....
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~--nv~~~~~D~~~~l---- 120 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ--NINVLRGNAMKFL---- 120 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT--TEEEEECCTTSCG----
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC--cEEEEeccHHHHH----
Confidence 3467899999999999999998864 468999999999999999988765 553 7888888875421
Q ss_pred cccccchhccccccccCCCCCCCeeEEEeccccccH-----------HHHHHHHHHcccCCeEEEEecCC
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-----------PQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----------~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
....+.+.+|.|+++.+-.+. ..++..+.++|+|||.+++.+..
T Consensus 121 ---------------~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 121 ---------------PNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp ---------------GGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ---------------HHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 001146789999876443321 47999999999999999985433
No 152
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.49 E-value=3.6e-13 Score=114.71 Aligned_cols=142 Identities=17% Similarity=0.175 Sum_probs=100.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh--cCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL--NNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++.. .++...++++...|...+.. .
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~--------~ 185 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE--------N 185 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH--------H
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh--------h
Confidence 346789999999999999999876 567999999999999999998764 23323478888887644310 0
Q ss_pred hhccccccccCCCCCCCeeEEEeccc--ccc----H-HHHHHHHHHcccCCeEEEEecC-CC---CcHHHHHHHHHhhhh
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANIL--LNP----L-PQLADHIVSYAKPGAVVGISGI-LS---EQLPRIINRYSEFLE 201 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~--~~~----~-~~~l~~~~~~LkpgG~l~~~~~-~~---~~~~~~~~~~~~~~~ 201 (222)
..++||+|+++++ ... + .++++.+.+.|||||.+++... .. ....++.+.+.+.|.
T Consensus 186 -------------~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 252 (321)
T 2pt6_A 186 -------------VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFK 252 (321)
T ss_dssp -------------CCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCS
T ss_pred -------------cCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC
Confidence 3567999999873 211 1 6889999999999999998522 21 234555666666555
Q ss_pred ccee-------cccCCceEeeccc
Q 047371 202 DILV-------SEKDDWRCVSGTK 218 (222)
Q Consensus 202 ~~~~-------~~~~~w~~~~~~k 218 (222)
.... ...|.|.-+.++|
T Consensus 253 ~v~~~~~~vp~~~~g~w~f~~as~ 276 (321)
T 2pt6_A 253 KVEYANISIPTYPCGCIGILCCSK 276 (321)
T ss_dssp EEEEEEEECTTSGGGEEEEEEEES
T ss_pred CeEEEEEEeccccCceEEEEEeeC
Confidence 4433 2346787666554
No 153
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.49 E-value=2.5e-13 Score=118.06 Aligned_cols=101 Identities=24% Similarity=0.261 Sum_probs=85.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.+++.+++.+..+|+|+|++ .+++.|++++..+++. .++++...+...+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~------------- 125 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLD-HIVEVIEGSVEDIS------------- 125 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCT-TTEEEEESCGGGCC-------------
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCC-CeEEEEECchhhcC-------------
Confidence 35688999999999999999999877799999999 9999999999988886 47899988876653
Q ss_pred cccccccCCCCCCCeeEEEecccccc------HHHHHHHHHHcccCCeEEEE
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~------~~~~l~~~~~~LkpgG~l~~ 181 (222)
..++||+|+++.+.+. ...++..+.++|||||.+++
T Consensus 126 ----------~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 126 ----------LPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp ----------CSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred ----------cCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 2378999999774432 45689999999999999987
No 154
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=2e-13 Score=104.54 Aligned_cols=123 Identities=14% Similarity=0.159 Sum_probs=90.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|.++..+++. + ..+++|+|+++ +++. .++.+...+....... .......
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~~~~-~~~~~~~- 84 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDELVM-KALLERV- 84 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSHHHH-HHHHHHH-
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccchhh-hhhhccC-
Confidence 467889999999999999998876 4 47999999999 6421 2677777776543200 0000001
Q ss_pred hccccccccCCCCCCCeeEEEeccccccH--------------HHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPL--------------PQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~--------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
+.++||+|+++.++++. ..+++.+.++|+|||.+++..........+.+.+...
T Consensus 85 ------------~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 152 (180)
T 1ej0_A 85 ------------GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL 152 (180)
T ss_dssp ------------TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH
T ss_pred ------------CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh
Confidence 56789999998876531 5789999999999999999877777888888888777
Q ss_pred hhccee
Q 047371 200 LEDILV 205 (222)
Q Consensus 200 ~~~~~~ 205 (222)
+..+..
T Consensus 153 ~~~~~~ 158 (180)
T 1ej0_A 153 FTKVKV 158 (180)
T ss_dssp EEEEEE
T ss_pred hhhEEe
Confidence 655543
No 155
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=2.1e-13 Score=110.91 Aligned_cols=109 Identities=9% Similarity=0.113 Sum_probs=84.0
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++.. ..++.+...|...+... ...
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~~-----~~~--- 119 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT-----AANISYRLLDGLVPEQA-----AQI--- 119 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC-----CTTEEEEECCTTCHHHH-----HHH---
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc-----ccCceEEECcccccccc-----ccc---
Confidence 56788999999999999999998864 89999999999999998762 13788888887654210 000
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCCCC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGILSE 187 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~~~ 187 (222)
.....||+|+++..++++ ..+++++.++|||||++++.++...
T Consensus 120 ---------~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 120 ---------HSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp ---------HHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred ---------ccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 011348999998877764 4789999999999999888765443
No 156
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.49 E-value=4.2e-13 Score=114.54 Aligned_cols=102 Identities=25% Similarity=0.319 Sum_probs=84.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|++++..+++. .++++...+...+..
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~------------ 101 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFS-DKITLLRGKLEDVHL------------ 101 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCT-TTEEEEESCTTTSCC------------
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCC-CCEEEEECchhhccC------------
Confidence 35789999999999999999998877799999999 5999999999888875 478898888765532
Q ss_pred cccccccCCCCCCCeeEEEecccccc------HHHHHHHHHHcccCCeEEEE
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~------~~~~l~~~~~~LkpgG~l~~ 181 (222)
+.++||+|+++.+.+. +..++..+.++|||||.++.
T Consensus 102 ----------~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 102 ----------PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ----------SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ----------CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 4578999999865432 46788999999999999973
No 157
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=8.7e-13 Score=111.86 Aligned_cols=159 Identities=11% Similarity=0.092 Sum_probs=110.7
Q ss_pred ceeEEeCCCccccc-------CCcchhHHHHHHHHh---hhcCCC--cEEEEccCCCHHHHHHHH-hCCCEEEEEeCChH
Q 047371 26 ATNIILNPGLAFGT-------GEHATTKLCLLLLQS---LIKGGE--LFLDYGTGSGILGIAAIK-FGAAMFVGVDIDPQ 92 (222)
Q Consensus 26 ~~~~~~~~~~~f~~-------~~~~~~~~~~~~l~~---~~~~~~--~vLD~G~G~G~~~~~la~-~~~~~v~gvD~s~~ 92 (222)
.+.+.++-...... ..+.+.+.+...+.. ..+.++ +|||+|||+|.++..+++ ++..+++++|+++.
T Consensus 45 g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~ 124 (317)
T 3gjy_A 45 GWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAE 124 (317)
T ss_dssp EEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHH
T ss_pred eEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHH
Confidence 45666665544432 244566666665544 234444 999999999999999988 56679999999999
Q ss_pred HHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHH
Q 047371 93 VIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQL 165 (222)
Q Consensus 93 ~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~ 165 (222)
+++.|++++.... ..++++...|+..+.. .. +.++||+|+++..... ..++
T Consensus 125 vi~~Ar~~~~~~~--~~rv~v~~~Da~~~l~-------~~-------------~~~~fDvIi~D~~~~~~~~~~L~t~ef 182 (317)
T 3gjy_A 125 LARLSREWFDIPR--APRVKIRVDDARMVAE-------SF-------------TPASRDVIIRDVFAGAITPQNFTTVEF 182 (317)
T ss_dssp HHHHHHHHSCCCC--TTTEEEEESCHHHHHH-------TC-------------CTTCEEEEEECCSTTSCCCGGGSBHHH
T ss_pred HHHHHHHhccccC--CCceEEEECcHHHHHh-------hc-------------cCCCCCEEEECCCCccccchhhhHHHH
Confidence 9999999875432 2478898888754421 00 3578999999753321 2679
Q ss_pred HHHHHHcccCCeEEEEecCCC---CcHHHHHHHHHhhhhcceec
Q 047371 166 ADHIVSYAKPGAVVGISGILS---EQLPRIINRYSEFLEDILVS 206 (222)
Q Consensus 166 l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 206 (222)
++.+.++|+|||++++..... .....+.+.+.+.|......
T Consensus 183 l~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~ 226 (317)
T 3gjy_A 183 FEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVI 226 (317)
T ss_dssp HHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEE
Confidence 999999999999999864322 22356777777777665543
No 158
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.49 E-value=7.3e-14 Score=114.39 Aligned_cols=109 Identities=19% Similarity=0.233 Sum_probs=78.8
Q ss_pred CCCcEEEEccCCCHHHHHHHHh---CCCEEEEEeCChHHHHHHHHHHHhc---CCCCCc---------------------
Q 047371 58 GGELFLDYGTGSGILGIAAIKF---GAAMFVGVDIDPQVIKSAHQNAALN---NIGPKK--------------------- 110 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~---~~~~v~gvD~s~~~l~~a~~~~~~~---~~~~~~--------------------- 110 (222)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++... ++. .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-ARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-HHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-ccchhhhhhhhhcccccchhhhh
Confidence 4679999999999999988875 3468999999999999999988755 432 11
Q ss_pred ----ee-------------EEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc------------
Q 047371 111 ----IK-------------LHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP------------ 161 (222)
Q Consensus 111 ----v~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~------------ 161 (222)
+. +...|...... ... ....++||+|++|+++..
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~-----~~~------------~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~ 192 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRA-----LSA------------VLAGSAPDVVLTDLPYGERTHWEGQVPGQP 192 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGG-----HHH------------HHTTCCCSEEEEECCGGGSSSSSSCCCHHH
T ss_pred hhhhhhhhccccccccccceeecccccccc-----ccc------------ccCCCCceEEEeCCCeeccccccccccccH
Confidence 44 66555433210 000 002347999999988653
Q ss_pred HHHHHHHHHHcccCCeEEEEecC
Q 047371 162 LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 162 ~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+..+++++.++|||||++++.+.
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHHHhcCCCcEEEEeCc
Confidence 23689999999999999998533
No 159
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.49 E-value=8.7e-13 Score=107.37 Aligned_cols=130 Identities=18% Similarity=0.131 Sum_probs=89.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|.+|||+|||+|..+..+++. +.++|+|+|+++.+++...+.+... .++.+...|+..... ...
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~~~~-----~~~-- 142 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADARFPQS-----YKS-- 142 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTTCGGG-----TTT--
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEcccccchh-----hhc--
Confidence 568999999999999999999875 4679999999999876554444332 278888887754310 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHH-HHHHHcccCCeEEEEecC---------CCCcHHHHHHHHHhh-hhc
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLA-DHIVSYAKPGAVVGISGI---------LSEQLPRIINRYSEF-LED 202 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~---------~~~~~~~~~~~~~~~-~~~ 202 (222)
..++||+|+++.+.......+ ..+.+.|||||.++++.- ..+...+..+.+.+. |..
T Consensus 143 ------------~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~ 210 (232)
T 3id6_C 143 ------------VVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFET 210 (232)
T ss_dssp ------------TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEE
T ss_pred ------------cccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEE
Confidence 245799999998775555554 556669999999998521 122334555666553 766
Q ss_pred ceeccc
Q 047371 203 ILVSEK 208 (222)
Q Consensus 203 ~~~~~~ 208 (222)
++....
T Consensus 211 ~~~~~l 216 (232)
T 3id6_C 211 IQIINL 216 (232)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 665544
No 160
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.48 E-value=3.2e-13 Score=117.23 Aligned_cols=99 Identities=21% Similarity=0.330 Sum_probs=83.7
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
+|++|||+|||+|.+++.+++.|+.+|+|+|.++ +++.|++++..+++. +++++...+.+.+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~-~~i~~i~~~~~~~~--------------- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLE-DRVHVLPGPVETVE--------------- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCT-TTEEEEESCTTTCC---------------
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCC-ceEEEEeeeeeeec---------------
Confidence 6999999999999999999999989999999986 889999999999987 58999998876653
Q ss_pred cccccCCCCCCCeeEEEeccccc------cHHHHHHHHHHcccCCeEEEE
Q 047371 138 SHEIRGISETEEYDVVIANILLN------PLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 181 (222)
..++||+|++...-+ .+..++....++|||||.++-
T Consensus 146 --------lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 146 --------LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp --------CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred --------CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 346899999865322 256678888899999999874
No 161
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.48 E-value=4.1e-13 Score=106.11 Aligned_cols=133 Identities=14% Similarity=0.219 Sum_probs=92.8
Q ss_pred HHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 48 CLLLLQSL--IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 48 ~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
+.+++.++ ++++.+|||+|||+|.++..+++. ..+|+|+|+++.. .+ .++.+...|......
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~--~~v~~~~~D~~~~~~-- 76 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI--AGVRFIRCDIFKETI-- 76 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC--TTCEEEECCTTSSSH--
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC--CCeEEEEccccCHHH--
Confidence 44555554 578999999999999999999988 5799999999841 22 367888888754311
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEecccccc--------------HHHHHHHHHHcccCCeEEEEecCCCCcHHH
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------------LPQLADHIVSYAKPGAVVGISGILSEQLPR 191 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 191 (222)
........ .. ...++||+|+++++... ...+++.+.++|||||.+++..+......+
T Consensus 77 ~~~~~~~~--------~~-~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~ 147 (191)
T 3dou_A 77 FDDIDRAL--------RE-EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTND 147 (191)
T ss_dssp HHHHHHHH--------HH-HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHH
T ss_pred HHHHHHHh--------hc-ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHH
Confidence 00000000 00 00148999999875321 234688899999999999998777777788
Q ss_pred HHHHHHhhhhccee
Q 047371 192 IINRYSEFLEDILV 205 (222)
Q Consensus 192 ~~~~~~~~~~~~~~ 205 (222)
+...+...|..+..
T Consensus 148 ~~~~l~~~F~~v~~ 161 (191)
T 3dou_A 148 FIAIWRKNFSSYKI 161 (191)
T ss_dssp HHHHHGGGEEEEEE
T ss_pred HHHHHHHhcCEEEE
Confidence 88888888766654
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=2.7e-13 Score=108.11 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=82.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhC--CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFG--AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.|+++....++. ++.+...+.....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~----------- 141 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD--NVIVIVGDGTLGY----------- 141 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT--TEEEEESCGGGCC-----------
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CeEEEECCcccCC-----------
Confidence 4578899999999999999988763 279999999999999999998877764 6777777653210
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
...++||+|+++.+++++. +.+.++|||||.+++...
T Consensus 142 -----------~~~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 142 -----------EPLAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp -----------GGGCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEES
T ss_pred -----------CCCCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEEEC
Confidence 0256799999998887654 588999999999998743
No 163
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.48 E-value=3e-13 Score=109.02 Aligned_cols=99 Identities=22% Similarity=0.200 Sum_probs=80.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++....+ ++.+...|.....
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~v~~~~~d~~~~~------------- 129 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN----NIKLILGDGTLGY------------- 129 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS----SEEEEESCGGGCC-------------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC----CeEEEECCccccc-------------
Confidence 4578899999999999999999886 799999999999999999886554 5777777654311
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
...++||+|+++.+++++. +.+.+.|||||.+++...
T Consensus 130 ---------~~~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 130 ---------EEEKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ---------GGGCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEEC
T ss_pred ---------ccCCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEEc
Confidence 0356899999998887654 478899999999998743
No 164
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.48 E-value=3.5e-13 Score=109.12 Aligned_cols=106 Identities=17% Similarity=0.093 Sum_probs=81.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+.+++..+ .++.+...|...... .+.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~~~~~~------~~~- 143 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDARHPHK------YRM- 143 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCTTCGGG------GGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEcccCChhh------hcc-
Confidence 467889999999999999999876 4579999999999888888777654 278888887754210 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccH-HHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPL-PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|+++.+.... ..++.++.+.|||||.++++..
T Consensus 144 ------------~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 144 ------------LIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp ------------GCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------cCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 35689999998873322 4468889999999999999643
No 165
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=7e-13 Score=108.10 Aligned_cols=99 Identities=23% Similarity=0.313 Sum_probs=79.5
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|+++....+. ++.+...|...+.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~---~v~~~~~d~~~~~-------------- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRVARRKAKERNL---KIEFLQGDVLEIA-------------- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC---CCEEEESCGGGCC--------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhcCC---ceEEEECChhhcc--------------
Confidence 467899999999999999999875 5899999999999999999876654 5777777765442
Q ss_pred ccccccCCCCCCCeeEEEeccc-cc-----cHHHHHHHHHHcccCCeEEEEe
Q 047371 137 SSHEIRGISETEEYDVVIANIL-LN-----PLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~-~~-----~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|++... .+ ....+++.+.++|||||.+++.
T Consensus 102 ---------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 102 ---------FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp ---------CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 2467999997532 22 2456899999999999999874
No 166
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.48 E-value=1.7e-13 Score=127.84 Aligned_cols=124 Identities=18% Similarity=0.255 Sum_probs=92.8
Q ss_pred cccccCCcchhHHHHHHHHhhh--cCCCcEEEEccCCCHHHHHHHHhC--CCEEEEEeCChHHHHHHHHHHHhc------
Q 047371 35 LAFGTGEHATTKLCLLLLQSLI--KGGELFLDYGTGSGILGIAAIKFG--AAMFVGVDIDPQVIKSAHQNAALN------ 104 (222)
Q Consensus 35 ~~f~~~~~~~~~~~~~~l~~~~--~~~~~vLD~G~G~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~------ 104 (222)
...+....+......+.+...+ .++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++...
T Consensus 696 me~gtFsPPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~ 775 (950)
T 3htx_A 696 MEAAFFKPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEAC 775 (950)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCS
T ss_pred HhhCcCCchHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhc
Confidence 3333334454444444444442 378999999999999999999875 269999999999999999866532
Q ss_pred CCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHH-----HHHHHHHHcccCCeEE
Q 047371 105 NIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLP-----QLADHIVSYAKPGAVV 179 (222)
Q Consensus 105 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~-----~~l~~~~~~LkpgG~l 179 (222)
++ .++.+...|...+.. ..++||+|+++.+++++. .+++.+.++|||| .+
T Consensus 776 gl--~nVefiqGDa~dLp~----------------------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~L 830 (950)
T 3htx_A 776 NV--KSATLYDGSILEFDS----------------------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LL 830 (950)
T ss_dssp SC--SEEEEEESCTTSCCT----------------------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EE
T ss_pred CC--CceEEEECchHhCCc----------------------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EE
Confidence 33 378899988876543 567899999999888743 4789999999999 76
Q ss_pred EEec
Q 047371 180 GISG 183 (222)
Q Consensus 180 ~~~~ 183 (222)
+++.
T Consensus 831 IIST 834 (950)
T 3htx_A 831 IVST 834 (950)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 167
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.48 E-value=9.5e-13 Score=109.92 Aligned_cols=155 Identities=16% Similarity=0.054 Sum_probs=96.9
Q ss_pred chhHHHHHHHHhhh--cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeC-ChHHHHHHHHHHHh-----cCCC---CCce
Q 047371 43 ATTKLCLLLLQSLI--KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDI-DPQVIKSAHQNAAL-----NNIG---PKKI 111 (222)
Q Consensus 43 ~~~~~~~~~l~~~~--~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~-s~~~l~~a~~~~~~-----~~~~---~~~v 111 (222)
+.+..+.+++.... .++.+|||+|||+|.+++.+++.+..+|+|+|+ ++.+++.|++++.. +++. ..++
T Consensus 62 ~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 62 SGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred cHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 44666666666553 468899999999999999999887669999999 89999999999843 3321 0145
Q ss_pred eEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHccc---C--CeEEEEec
Q 047371 112 KLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAK---P--GAVVGISG 183 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~Lk---p--gG~l~~~~ 183 (222)
.+...+...... .....+ ..++||+|++..++++ ...+++.+.++|+ | ||.+++..
T Consensus 142 ~~~~~~~~~~~~---~~~~~~-------------~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 142 KVVPYRWGDSPD---SLQRCT-------------GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp EEEECCTTSCTH---HHHHHH-------------SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EEEEecCCCccH---HHHhhc-------------cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 555333221100 000000 2467999998554443 5678999999999 9 99877642
Q ss_pred CCC-----CcHHHHHHHHHh-h-hhcceecccCCceE
Q 047371 184 ILS-----EQLPRIINRYSE-F-LEDILVSEKDDWRC 213 (222)
Q Consensus 184 ~~~-----~~~~~~~~~~~~-~-~~~~~~~~~~~w~~ 213 (222)
... ....++.+.+.+ + |..........|..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~~~~~ 242 (281)
T 3bzb_A 206 THHRPHLAERDLAFFRLVNADGALIAEPWLSPLQMDP 242 (281)
T ss_dssp CC--------CTHHHHHHHHSTTEEEEEEECCC----
T ss_pred EeeecccchhHHHHHHHHHhcCCEEEEEecccccccc
Confidence 221 223455555554 3 66666656666743
No 168
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.48 E-value=9.1e-13 Score=106.04 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=80.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++.+|||+|||+|.++..+++. + ..+++|+|+++.+++.+++++... .++.+...|...... ...
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~-----~~~-- 139 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDATKPEE-----YRA-- 139 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCTTCGGG-----GTT--
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccCCCcch-----hhc--
Confidence 457889999999999999999875 3 479999999999999999887654 378888887754210 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHH-HHHHHHHHcccCCeEEEEe
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLP-QLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~-~~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+++.+..... .++.++.+.|||||.+++.
T Consensus 140 ------------~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 140 ------------LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ------------TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 235799999988754443 3499999999999999985
No 169
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.48 E-value=3.8e-13 Score=110.36 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=87.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..++.+++. + ..+++++|+++.+++.|++++...++. .++++..++.......... .+.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~~l~~--~~~-- 152 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD-HKIDFREGPALPVLDEMIK--DEK-- 152 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHH--SGG--
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEEECCHHHHHHHHHh--ccC--
Confidence 46789999999999999999875 3 579999999999999999999888874 5788888876433100000 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.....+..+++.+.++|||||++++..
T Consensus 153 -----------~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 153 -----------NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp -----------GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred -----------CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 14689999998877778899999999999999999853
No 170
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=2.1e-13 Score=112.26 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=78.3
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++. ++.+...+...+..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~d~~~~~~------------- 90 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVHP--------QVEWFTGYAENLAL------------- 90 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCCT--------TEEEECCCTTSCCS-------------
T ss_pred CCCCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcc--------CCEEEECchhhCCC-------------
Confidence 57899999999999999999885 479999999999988776543 57788887765532
Q ss_pred ccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+.++||+|+++.++++ ...+++++.++|| ||.+++.+
T Consensus 91 ---------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 91 ---------PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ---------CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred ---------CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 5688999999988766 4678999999999 99777743
No 171
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.47 E-value=7.3e-13 Score=109.34 Aligned_cols=113 Identities=21% Similarity=0.293 Sum_probs=86.1
Q ss_pred HHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChH------HHHHHHHHHHhcCCCCCceeEEecC--
Q 047371 49 LLLLQSL-IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQ------VIKSAHQNAALNNIGPKKIKLHLVP-- 117 (222)
Q Consensus 49 ~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~------~l~~a~~~~~~~~~~~~~v~~~~~~-- 117 (222)
..++... ++++.+|||+|||+|.++..+++. + ..+++|+|+++. +++.|++++...++. .++++...|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~ 111 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG-DRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG-GGEEEECSCCT
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC-CceEEEECChh
Confidence 3344433 567899999999999999998876 3 379999999997 999999998877764 478888876
Q ss_pred -CcccccccccccccchhccccccccCCCCCCCeeEEEeccccccH---HHHHHHHHHcccCCeEEEEecC
Q 047371 118 -DRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL---PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
...... +.++||+|+++.++++. ..+++.+.++++|||++++.++
T Consensus 112 ~~~~~~~----------------------~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 112 SDDLGPI----------------------ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp TTCCGGG----------------------TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred hhccCCC----------------------CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 222111 46789999998888763 4467777777788999999644
No 172
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.47 E-value=1.9e-12 Score=102.52 Aligned_cols=111 Identities=22% Similarity=0.233 Sum_probs=83.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++..+++ ++.+...|...+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~--------------- 109 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG---KFKVFIGDVSEF--------------- 109 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT---SEEEEESCGGGC---------------
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC---CEEEEECchHHc---------------
Confidence 36889999999999999999988767899999999999999999887765 577877776443
Q ss_pred ccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC-CCCcHHHHHHHHHh
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI-LSEQLPRIINRYSE 198 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~~~~~ 198 (222)
+ ++||+|++|+|++.. ..+++.+.+.+ | .+++.+. .......+.+.+.+
T Consensus 110 ---------~-~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~-~~~~~~~~~~~~~~~~~~~l~~ 164 (207)
T 1wy7_A 110 ---------N-SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--D-VVYSIHLAKPEVRRFIEKFSWE 164 (207)
T ss_dssp ---------C-CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--S-EEEEEEECCHHHHHHHHHHHHH
T ss_pred ---------C-CCCCEEEEcCCCccccCCchHHHHHHHHHhc--C-cEEEEEeCCcCCHHHHHHHHHH
Confidence 2 379999999997653 46788888888 4 4555443 23334444455444
No 173
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.47 E-value=1.3e-13 Score=111.74 Aligned_cols=108 Identities=11% Similarity=0.137 Sum_probs=81.3
Q ss_pred HHHhhhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCC-hHHHHHH---HHHHHhcCCCCCceeEEecCCccccccc
Q 047371 51 LLQSLIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDID-PQVIKSA---HQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 51 ~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s-~~~l~~a---~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
++....+++.+|||+|||+|.++..+++. +..+|+|+|+| +.+++.| ++++...++. ++.+...+...++.
T Consensus 17 ~~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~--~v~~~~~d~~~l~~-- 92 (225)
T 3p2e_A 17 LTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS--NVVFVIAAAESLPF-- 92 (225)
T ss_dssp HHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS--SEEEECCBTTBCCG--
T ss_pred HHHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC--CeEEEEcCHHHhhh--
Confidence 33334567889999999999999998863 55789999999 6666665 7777666764 78888887765521
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEecccccc--------HHHHHHHHHHcccCCeEEEE
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~ 181 (222)
. ....+|.+.++.+... ...+++++.++|||||.+++
T Consensus 93 -----~--------------~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 -----E--------------LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -----G--------------GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -----h--------------ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 0 1256888888876543 24578999999999999998
No 174
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.47 E-value=6.2e-13 Score=118.16 Aligned_cols=142 Identities=17% Similarity=0.123 Sum_probs=100.8
Q ss_pred ccccCCcchhHHHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHh-CC-CEEEEEeCChHHHHHHHHHHHhcCCCCCce
Q 047371 36 AFGTGEHATTKLCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKF-GA-AMFVGVDIDPQVIKSAHQNAALNNIGPKKI 111 (222)
Q Consensus 36 ~f~~~~~~~~~~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v 111 (222)
.|..|..........++... .+++.+|||+|||+|..+..+++. +. .+++|+|+++.+++.+++++...++. ++
T Consensus 235 ~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~--~v 312 (450)
T 2yxl_A 235 AFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK--IV 312 (450)
T ss_dssp HHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC--SE
T ss_pred hhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC--cE
Confidence 44455544333333333332 457889999999999999998875 33 79999999999999999999988875 78
Q ss_pred eEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccH-------------------------HHHH
Q 047371 112 KLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-------------------------PQLA 166 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-------------------------~~~l 166 (222)
.+...|...+.. ..+.++||+|++++|+... ..++
T Consensus 313 ~~~~~D~~~~~~--------------------~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL 372 (450)
T 2yxl_A 313 KPLVKDARKAPE--------------------IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELL 372 (450)
T ss_dssp EEECSCTTCCSS--------------------SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHH
T ss_pred EEEEcChhhcch--------------------hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHH
Confidence 888877654420 0033679999998876431 4679
Q ss_pred HHHHHcccCCeEEEEecCC---CCcHHHHHHHHHhh
Q 047371 167 DHIVSYAKPGAVVGISGIL---SEQLPRIINRYSEF 199 (222)
Q Consensus 167 ~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~~~~~ 199 (222)
+.+.++|||||.+++++.. .++...+...+..+
T Consensus 373 ~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 373 ESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp HHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred HHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC
Confidence 9999999999999986432 23334455555553
No 175
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.47 E-value=3.6e-13 Score=114.30 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=84.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.|++++...++. ++.+...|......
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~--~v~~~~~d~~~~~~---------- 140 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE--NVIFVCGDGYYGVP---------- 140 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCGGGCCG----------
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CeEEEECChhhccc----------
Confidence 467899999999999999998876 3 357999999999999999999888875 68888877654311
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|+++.+++++. +.+.+.|||||.+++...
T Consensus 141 ------------~~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 141 ------------EFSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp ------------GGCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEBC
T ss_pred ------------cCCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEEC
Confidence 346799999999888765 578889999999999754
No 176
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=7.8e-13 Score=114.80 Aligned_cols=115 Identities=18% Similarity=0.130 Sum_probs=88.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCC-CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGA-AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.+++.++..+. .+++|+|+++.+++.|++++..+++. +++++...|...+..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~-~~i~~~~~D~~~~~~----------- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL-DKIKFIQGDATQLSQ----------- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG-GGCEEEECCGGGGGG-----------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC-CceEEEECChhhCCc-----------
Confidence 56789999999999999999998753 48999999999999999999988875 478999988866532
Q ss_pred ccccccccCCCCCCCeeEEEecccccc-----------HHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHh
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNP-----------LPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSE 198 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 198 (222)
+.++||+|++|+|+.. +..+++.+.+.| .|+.+++++ +...+.+.+..
T Consensus 283 -----------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~----~~~~~~~~~~~ 341 (373)
T 3tm4_A 283 -----------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITT----EKKAIEEAIAE 341 (373)
T ss_dssp -----------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEES----CHHHHHHHHHH
T ss_pred -----------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEEC----CHHHHHHHHHH
Confidence 4578999999999753 356788888888 444444432 33444445543
No 177
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.47 E-value=4.5e-14 Score=114.71 Aligned_cols=100 Identities=21% Similarity=0.127 Sum_probs=84.3
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++..+++. .++.+...|...+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~--------------- 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIA-DKIEFICGDFLLLA--------------- 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHG---------------
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCC-cCeEEEECChHHhc---------------
Confidence 78999999999999999999886 79999999999999999999888874 37889888875542
Q ss_pred cccccCCCCCCCeeEEEeccccccHHH---HHHHHHHcccCCeEEEEe
Q 047371 138 SHEIRGISETEEYDVVIANILLNPLPQ---LADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~~~~---~l~~~~~~LkpgG~l~~~ 182 (222)
+.++||+|++++++++... .+.++.++|+|||.+++.
T Consensus 141 --------~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 141 --------SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp --------GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred --------ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 3568999999999887433 456788999999986663
No 178
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.47 E-value=5.1e-13 Score=108.34 Aligned_cols=102 Identities=20% Similarity=0.236 Sum_probs=81.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++....+++++|+++.+++.|++++...++. ++.+...+....
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~-------------- 152 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK--NVHVILGDGSKG-------------- 152 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCGGGC--------------
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC--CcEEEECCcccC--------------
Confidence 4578899999999999999988763278999999999999999999888775 577877765111
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+....+||+|+++.+++++. +.+.+.|||||.+++...
T Consensus 153 --------~~~~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 153 --------FPPKAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp --------CGGGCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEEEC
T ss_pred --------CCCCCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEEEe
Confidence 11234699999988876543 478899999999999744
No 179
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.47 E-value=1.6e-13 Score=121.86 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=91.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++...++. ++.+...|...+.. .
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~--nv~v~~~Da~~l~~--------~- 171 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS--NAIVTNHAPAELVP--------H- 171 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS--SEEEECCCHHHHHH--------H-
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEeCCHHHhhh--------h-
Confidence 457899999999999999998875 3479999999999999999999999986 78887777654320 0
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-------------------------HHHHHHHHHHcccCCeEEEEecC--CC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-------------------------LPQLADHIVSYAKPGAVVGISGI--LS 186 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~l~~~~~--~~ 186 (222)
..++||+|++++|+.. ...++..+.++|||||.+++++. ..
T Consensus 172 ------------~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 172 ------------FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp ------------HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred ------------ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 2467999999998532 12679999999999999988533 23
Q ss_pred -CcHHHHHHHHHhh
Q 047371 187 -EQLPRIINRYSEF 199 (222)
Q Consensus 187 -~~~~~~~~~~~~~ 199 (222)
++...+...+..+
T Consensus 240 eEne~vv~~~l~~~ 253 (456)
T 3m4x_A 240 EENEEIISWLVENY 253 (456)
T ss_dssp GGTHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHhC
Confidence 3334444444443
No 180
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.47 E-value=3.4e-13 Score=113.15 Aligned_cols=114 Identities=13% Similarity=0.108 Sum_probs=86.8
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCC-CCceeEEecCCccccccc
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIG-PKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~~~~~~~~~~ 125 (222)
....++..+..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++...++. ..++.+...|...+.
T Consensus 71 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~--- 146 (299)
T 3g2m_A 71 EAREFATRTGPVSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA--- 146 (299)
T ss_dssp HHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC---
T ss_pred HHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC---
Confidence 3344444443445699999999999999999885 68999999999999999998765531 026888888876552
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEec-ccccc-----HHHHHHHHHHcccCCeEEEEecC
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIAN-ILLNP-----LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~-~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|++. ..+++ ...+++++.++|||||.+++...
T Consensus 147 --------------------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 147 --------------------LDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp --------------------CSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------------------cCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 36789998864 43443 35689999999999999999644
No 181
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=8.8e-13 Score=103.93 Aligned_cols=143 Identities=10% Similarity=0.120 Sum_probs=89.0
Q ss_pred HHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHh-C--CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccc
Q 047371 48 CLLLLQSL--IKGGELFLDYGTGSGILGIAAIKF-G--AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122 (222)
Q Consensus 48 ~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~-~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~ 122 (222)
+.+++..+ ++++.+|||+|||+|.++..+++. + ..+|+|+|+++.. .. .++.+...|.....
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~--~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI--PNVYFIQGEIGKDN 76 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC--TTCEEEECCTTTTS
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC--CCceEEEccccchh
Confidence 44455544 567899999999999999999875 4 4799999999831 11 25677777665432
Q ss_pred cccccccccchhcccc----ccccCCCCCCCeeEEEecccccc-----H---------HHHHHHHHHcccCCeEEEEecC
Q 047371 123 ASMNERVDGVVEYLSS----HEIRGISETEEYDVVIANILLNP-----L---------PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~D~v~~~~~~~~-----~---------~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
... -...+.++.... ..+....+.++||+|+++.+.+. . ..+++.+.++|||||.+++..+
T Consensus 77 ~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 77 MNN-IKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp SCC-C-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhh-hccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 000 000000000000 00000014568999999876543 1 1368889999999999999766
Q ss_pred CCCcHHHHHHHHHhhhhcce
Q 047371 185 LSEQLPRIINRYSEFLEDIL 204 (222)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~ 204 (222)
......++...+...|..+.
T Consensus 156 ~~~~~~~l~~~l~~~f~~v~ 175 (201)
T 2plw_A 156 LGSQTNNLKTYLKGMFQLVH 175 (201)
T ss_dssp CSTTHHHHHHHHHTTEEEEE
T ss_pred CCCCHHHHHHHHHHHHheEE
Confidence 66667777777776654443
No 182
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.46 E-value=3.4e-13 Score=108.51 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=86.2
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhC------CCEEEEEeCChHHHHHHHHHHHhcCC---CCCceeEEecC
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFG------AAMFVGVDIDPQVIKSAHQNAALNNI---GPKKIKLHLVP 117 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~v~~~~~~ 117 (222)
.+.+.+...++++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++...++ ...++.+...|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 3444443345678999999999999999988763 25999999999999999999887762 11378888777
Q ss_pred CcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 118 DRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
...... . .. ...++||+|+++.+.++ +++.+.++|||||.+++..
T Consensus 149 ~~~~~~---~--~~-------------~~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 149 IYQVNE---E--EK-------------KELGLFDAIHVGASASE---LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp GGGCCH---H--HH-------------HHHCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEEE
T ss_pred hHhccc---c--cC-------------ccCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 643210 0 00 03467999999988774 4578899999999999863
No 183
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.46 E-value=8.5e-13 Score=113.50 Aligned_cols=100 Identities=23% Similarity=0.245 Sum_probs=83.5
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++. +++++...+...+.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~-~~v~~~~~d~~~~~-------------- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT-DRIVVIPGKVEEVS-------------- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT-TTEEEEESCTTTCC--------------
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCC-CcEEEEEcchhhCC--------------
Confidence 47889999999999999999988777999999996 889999999888875 47889888876542
Q ss_pred ccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~ 181 (222)
..++||+|+++.+.++ +...+..+.++|||||.+++
T Consensus 113 ---------~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 113 ---------LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp ---------CSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred ---------CCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 2357999999876543 45677888999999999985
No 184
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.46 E-value=7.5e-13 Score=107.85 Aligned_cols=111 Identities=11% Similarity=0.115 Sum_probs=88.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++. .++++..++...... .+.+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~-------~l~~ 140 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE-HKINFIESDAMLALD-------NLLQ 140 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHH-------HHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-------HHHh
Confidence 46789999999999999998875 3 579999999999999999999888874 478888887643310 0000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
.-.+.++||+|+++.....+..+++.+.++|+|||++++..
T Consensus 141 --------~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 141 --------GQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp --------STTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred --------ccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 00014689999999877778899999999999999999854
No 185
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=6.2e-13 Score=108.11 Aligned_cols=121 Identities=16% Similarity=0.155 Sum_probs=88.6
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++. .++.+...+.......... .
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~~~~~~---~-- 131 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE-NKIFLKLGSALETLQVLID---S-- 131 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHH---C--
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCEEEEECCHHHHHHHHHh---h--
Confidence 347889999999999999999876 3 579999999999999999999887765 3588888775432100000 0
Q ss_pred hccccccccCCCCC--CCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISET--EEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~--~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..........+. ++||+|+++.....+..+++.+.++|+|||.+++...
T Consensus 132 --~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 132 --KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp --SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred --cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 000000000022 7899999998877788999999999999999999653
No 186
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.46 E-value=9.3e-13 Score=112.76 Aligned_cols=143 Identities=16% Similarity=0.165 Sum_probs=98.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhc--CCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALN--NIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.+++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++... ++...++++...|+..+.. ..
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~-------~~ 190 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK-------NA 190 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH-------TS
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH-------hc
Confidence 356789999999999999999876 4579999999999999999987642 4433478888887644310 00
Q ss_pred hhccccccccCCCCCCCeeEEEecccc--cc-----HHHHHHHHHHcccCCeEEEEe-cCCCCcH---HHHHHHHHhhhh
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILL--NP-----LPQLADHIVSYAKPGAVVGIS-GILSEQL---PRIINRYSEFLE 201 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~--~~-----~~~~l~~~~~~LkpgG~l~~~-~~~~~~~---~~~~~~~~~~~~ 201 (222)
+.++||+|+++++. +. ...+++.+.++|+|||.+++. +...... .++.+.+...|.
T Consensus 191 -------------~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 191 -------------AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFK 257 (334)
T ss_dssp -------------CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCS
T ss_pred -------------cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCc
Confidence 35689999997652 11 367899999999999999995 3332222 334444454454
Q ss_pred c--------ceecccCCceEeeccc
Q 047371 202 D--------ILVSEKDDWRCVSGTK 218 (222)
Q Consensus 202 ~--------~~~~~~~~w~~~~~~k 218 (222)
. ++....+.|.-+.+.|
T Consensus 258 ~~~~~~~~~vP~y~~g~~gf~~as~ 282 (334)
T 1xj5_A 258 GSVNYAWTSVPTYPSGVIGFMLCST 282 (334)
T ss_dssp SCEEEEEEECTTSGGGEEEEEEEEC
T ss_pred cccceEEEeCCcccCCceEEEEccc
Confidence 1 2223336676555444
No 187
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.45 E-value=4.5e-13 Score=116.13 Aligned_cols=156 Identities=14% Similarity=0.097 Sum_probs=97.5
Q ss_pred eeEEeCCCcccccCCcchhHHHHHHHHhhh-cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcC
Q 047371 27 TNIILNPGLAFGTGEHATTKLCLLLLQSLI-KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNN 105 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~-~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~ 105 (222)
..+.++|+..|..+ ......+...+.... ..+.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|++|+..++
T Consensus 182 ~~~~~~~~~F~Q~n-~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng 259 (369)
T 3bt7_A 182 MIYRQVENSFTQPN-AAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANH 259 (369)
T ss_dssp CEEEEETTSCCCSB-HHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCeecCC-HHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcC
Confidence 55677787666443 333344444443333 23678999999999999998875 5799999999999999999999988
Q ss_pred CCCCceeEEecCCcccccccccccccchhccccccccCC-CCCCCeeEEEeccccccHHHHHHHHHHcccCCeEE-EEec
Q 047371 106 IGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGI-SETEEYDVVIANILLNPLPQLADHIVSYAKPGAVV-GISG 183 (222)
Q Consensus 106 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l-~~~~ 183 (222)
+. ++++...|+..+........ +++. +... ....+||+|+++||...+ ...+.+.|+++|.+ +++|
T Consensus 260 ~~--~v~~~~~d~~~~~~~~~~~~----~~~~---l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 260 ID--NVQIIRMAAEEFTQAMNGVR----EFNR---LQGIDLKSYQCETIFVDPPRSGL---DSETEKMVQAYPRILYISC 327 (369)
T ss_dssp CC--SEEEECCCSHHHHHHHSSCC----CCTT---GGGSCGGGCCEEEEEECCCTTCC---CHHHHHHHTTSSEEEEEES
T ss_pred CC--ceEEEECCHHHHHHHHhhcc----cccc---ccccccccCCCCEEEECcCcccc---HHHHHHHHhCCCEEEEEEC
Confidence 85 88898888755421000000 0000 0000 011379999999987643 22334444566655 4566
Q ss_pred CCCCcHHHHHHHH
Q 047371 184 ILSEQLPRIINRY 196 (222)
Q Consensus 184 ~~~~~~~~~~~~~ 196 (222)
.+....+++....
T Consensus 328 ~p~t~ard~~~l~ 340 (369)
T 3bt7_A 328 NPETLCKNLETLS 340 (369)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 5555555555443
No 188
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.45 E-value=8.3e-13 Score=106.53 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=83.7
Q ss_pred HHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 46 KLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
..+..++....+++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++. .++.+...+...+.
T Consensus 28 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~--- 96 (239)
T 3bxo_A 28 SDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFR--- 96 (239)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCC---
T ss_pred HHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHcc---
Confidence 34555565555678999999999999999998875 38999999999999998864 25667777765442
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEe-ccccccH------HHHHHHHHHcccCCeEEEEecC
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIA-NILLNPL------PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~-~~~~~~~------~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|++ ...++++ ..+++++.++|||||.+++...
T Consensus 97 --------------------~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 97 --------------------LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp --------------------CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred --------------------cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 3567999995 4355443 4689999999999999999643
No 189
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.45 E-value=1.2e-12 Score=117.09 Aligned_cols=104 Identities=16% Similarity=0.218 Sum_probs=85.3
Q ss_pred CCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.+++++...++. ++.+...|+..+.. .
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~--nv~~~~~D~~~~~~--------~--- 183 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS--NVALTHFDGRVFGA--------A--- 183 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC--SEEEECCCSTTHHH--------H---
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEeCCHHHhhh--------h---
Confidence 7899999999999999999875 3479999999999999999999988875 78888887765421 0
Q ss_pred cccccccCCCCCCCeeEEEecccccc-------------------------HHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP-------------------------LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|++++|+.. ...++..+.++|||||.+++++.
T Consensus 184 ----------~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 184 ----------VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp ----------STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ----------ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 2467999999988631 13578999999999999998643
No 190
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.45 E-value=5.9e-13 Score=107.15 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=88.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++. .++++...+...... .+
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~~-------~~- 137 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE-HKIDLRLKPALETLD-------EL- 137 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-------HH-
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-CeEEEEEcCHHHHHH-------HH-
Confidence 346889999999999999999875 3 579999999999999999999888874 478888877643210 00
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..-...++||+|+++++...+..+++.+.++|+|||.+++...
T Consensus 138 --------~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 138 --------LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp --------HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred --------HhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 0000116799999998877788999999999999999999544
No 191
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.45 E-value=7.6e-13 Score=108.83 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=83.1
Q ss_pred HHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 47 LCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 47 ~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
.+..++...++++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++.. . + +...+...+..
T Consensus 43 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~----~--~--~~~~d~~~~~~--- 110 (260)
T 2avn_A 43 LIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERG-FEVVLVDPSKEMLEVAREKGV----K--N--VVEAKAEDLPF--- 110 (260)
T ss_dssp HHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHHTC----S--C--EEECCTTSCCS---
T ss_pred HHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcC-CeEEEEeCCHHHHHHHHhhcC----C--C--EEECcHHHCCC---
Confidence 3455566666678999999999999999998875 589999999999999988753 1 1 55555544322
Q ss_pred cccccchhccccccccCCCCCCCeeEEEecccccc----HHHHHHHHHHcccCCeEEEEecC
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP----LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|++...+.+ ...+++++.++|||||.+++...
T Consensus 111 -------------------~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 111 -------------------PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp -------------------CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------CCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 5678999999764433 46789999999999999998643
No 192
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.44 E-value=1.5e-12 Score=114.87 Aligned_cols=121 Identities=20% Similarity=0.235 Sum_probs=87.2
Q ss_pred hHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHH-------HHHHHhcCCCCCceeEEe
Q 047371 45 TKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSA-------HQNAALNNIGPKKIKLHL 115 (222)
Q Consensus 45 ~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a-------~~~~~~~~~~~~~v~~~~ 115 (222)
...+..++... ++++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.| ++++...++...++.+..
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 34444444433 567899999999999999999885 667899999999999998 888887775324788877
Q ss_pred cCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc--cHHHHHHHHHHcccCCeEEEEec
Q 047371 116 VPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN--PLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
++.....+. ... ..++||+|+++..+. .....+.++.+.|||||.+++..
T Consensus 308 gD~~~~~~~-----~~~-------------~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 308 KKSFVDNNR-----VAE-------------LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp SSCSTTCHH-----HHH-------------HGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cCccccccc-----ccc-------------ccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 643211000 000 135799999975442 35567899999999999999963
No 193
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.44 E-value=1.1e-12 Score=106.34 Aligned_cols=109 Identities=17% Similarity=0.258 Sum_probs=87.3
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++. .++++...+...... .+
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~l~-------~l-- 140 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA-EKISLRLGPALATLE-------QL-- 140 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHHH-------HH--
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-------HH--
Confidence 46789999999999999999875 3 469999999999999999999887775 468888877533210 00
Q ss_pred ccccccccCCCCC--CCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISET--EEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~--~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ... ++||+|+++.....+..+++.+.++|+|||++++...
T Consensus 141 -------~--~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 141 -------T--QGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp -------H--TSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred -------H--hcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 0 012 6899999988877788999999999999999999644
No 194
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=4.1e-12 Score=110.18 Aligned_cols=116 Identities=14% Similarity=0.085 Sum_probs=89.4
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCC-CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc-cccccccccccchhc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGA-AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT-FTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~ 135 (222)
++.+|||+| |+|.++..++..+. .+++|+|+++.+++.|++++..+++. ++++...|... +..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~--~v~~~~~D~~~~l~~------------ 236 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE--DIEIFTFDLRKPLPD------------ 236 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC--CEEEECCCTTSCCCT------------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CEEEEEChhhhhchh------------
Confidence 578999999 99999999988754 79999999999999999999988875 78888888755 210
Q ss_pred cccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeE-EEEecCC-CCcH---HHHHHHHH
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAV-VGISGIL-SEQL---PRIINRYS 197 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~-l~~~~~~-~~~~---~~~~~~~~ 197 (222)
...++||+|++|+|++. ...+++.+.+.|||||. ++++... ..+. ..+.+.+.
T Consensus 237 ---------~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 237 ---------YALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLL 296 (373)
T ss_dssp ---------TTSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred ---------hccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHH
Confidence 02357999999998864 45688999999999994 3554333 2334 45555554
No 195
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.44 E-value=1.3e-12 Score=111.00 Aligned_cols=143 Identities=14% Similarity=0.125 Sum_probs=96.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhc--CCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALN--NIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... ++...++++...|+..+..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~--------- 176 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK--------- 176 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH---------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH---------
Confidence 356789999999999999999876 4579999999999999999987643 3323478888877644310
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc------H-HHHHHHHHHcccCCeEEEEecC-C---CCcHHHHHHHHHhhhh
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP------L-PQLADHIVSYAKPGAVVGISGI-L---SEQLPRIINRYSEFLE 201 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~------~-~~~l~~~~~~LkpgG~l~~~~~-~---~~~~~~~~~~~~~~~~ 201 (222)
. ..++||+|+++.+... + ..+++.+.++|+|||.+++... . ......+.+.+...|.
T Consensus 177 ----------~--~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~ 244 (314)
T 2b2c_A 177 ----------N--HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFP 244 (314)
T ss_dssp ----------H--CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCS
T ss_pred ----------h--cCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCC
Confidence 0 3568999999874321 1 5789999999999999999631 1 1233455555655554
Q ss_pred ccee-------cccCCceEeecccC
Q 047371 202 DILV-------SEKDDWRCVSGTKF 219 (222)
Q Consensus 202 ~~~~-------~~~~~w~~~~~~k~ 219 (222)
.... ...|.|.-+...|.
T Consensus 245 ~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 245 AVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEEEEEECTTSGGGEEEEEEEESS
T ss_pred cceEEEEEecCcCCCceEEEEEeCC
Confidence 4332 22355555555443
No 196
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.44 E-value=1.1e-12 Score=110.96 Aligned_cols=141 Identities=15% Similarity=0.139 Sum_probs=97.8
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh--cCCCCCceeEEecCCcccccccccccccch
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL--NNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++.. .++...++++...|+..+..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~---------- 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK---------- 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH----------
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh----------
Confidence 46789999999999999999876 457999999999999999998764 34433578888887644310
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-------HHHHHHHHHHcccCCeEEEEec-CCC---CcHHHHHHHHHhhhhc
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHIVSYAKPGAVVGISG-ILS---EQLPRIINRYSEFLED 202 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~-~~~---~~~~~~~~~~~~~~~~ 202 (222)
...++||+|+++.+... ..++++.+.++|+|||.+++.. ... .....+.+.+...|..
T Consensus 164 -----------~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 164 -----------QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPV 232 (304)
T ss_dssp -----------TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSE
T ss_pred -----------hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCC
Confidence 03568999999876431 2468999999999999999853 221 1234555555555543
Q ss_pred cee-------cccCCceEeeccc
Q 047371 203 ILV-------SEKDDWRCVSGTK 218 (222)
Q Consensus 203 ~~~-------~~~~~w~~~~~~k 218 (222)
... ...+.|.-+..+|
T Consensus 233 v~~~~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 233 VAYAYCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp EEEEEEECTTSGGGEEEEEEEES
T ss_pred ceeEEEEeccccCcceEEEEEeC
Confidence 322 2235676555554
No 197
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.43 E-value=8.9e-13 Score=118.01 Aligned_cols=100 Identities=23% Similarity=0.245 Sum_probs=83.3
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.+++.+++.+..+|+|+|+++ +++.|++++..+++. +++++...+...+.
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~-~~v~~~~~d~~~~~-------------- 220 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT-DRIVVIPGKVEEVS-------------- 220 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCT-TTEEEEESCTTTCC--------------
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCC-CcEEEEECchhhCc--------------
Confidence 46789999999999999999988778999999998 999999999988885 48999988875542
Q ss_pred ccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~ 181 (222)
..++||+|+++++.++ +...+..+.++|||||.+++
T Consensus 221 ---------~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 221 ---------LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ---------CSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred ---------cCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 2357999999987543 34466788999999999985
No 198
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.43 E-value=5e-13 Score=107.42 Aligned_cols=112 Identities=22% Similarity=0.326 Sum_probs=84.7
Q ss_pred HHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh-C-CCEEEEEeCChHHHHHHHHHHHhcCC---CCCceeEEecCCcccc
Q 047371 48 CLLLLQSLIKGGELFLDYGTGSGILGIAAIKF-G-AAMFVGVDIDPQVIKSAHQNAALNNI---GPKKIKLHLVPDRTFT 122 (222)
Q Consensus 48 ~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~v~~~~~~~~~~~ 122 (222)
+.+.+....+++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...+. ...++.+...|.....
T Consensus 67 ~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (226)
T 1i1n_A 67 ALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY 146 (226)
T ss_dssp HHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC
T ss_pred HHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc
Confidence 34444333567899999999999999998875 3 35999999999999999999877553 0136778777654321
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ..++||+|+++.+++. +++.+.++|||||.++++..
T Consensus 147 ~----------------------~~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 147 A----------------------EEAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp G----------------------GGCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEES
T ss_pred c----------------------cCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEEe
Confidence 1 3567999999887764 45688999999999999643
No 199
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.43 E-value=1.2e-12 Score=115.64 Aligned_cols=141 Identities=17% Similarity=0.137 Sum_probs=99.6
Q ss_pred ccccCCcchhHHHHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCcee
Q 047371 36 AFGTGEHATTKLCLLLLQSL--IKGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIK 112 (222)
Q Consensus 36 ~f~~~~~~~~~~~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~ 112 (222)
.|..|..........++... .+++.+|||+|||+|..+..+++.. ..+++|+|+++.+++.+++++...++ ++.
T Consensus 222 ~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~---~~~ 298 (429)
T 1sqg_A 222 GFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM---KAT 298 (429)
T ss_dssp TGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC---CCE
T ss_pred HHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC---CeE
Confidence 34455544333333333322 4578999999999999999998863 37999999999999999999988876 356
Q ss_pred EEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------------------------HHHHHH
Q 047371 113 LHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------------------------LPQLAD 167 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------------------------~~~~l~ 167 (222)
+...|...+.. .. +.++||+|++++|+.. ...+++
T Consensus 299 ~~~~D~~~~~~-------~~-------------~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~ 358 (429)
T 1sqg_A 299 VKQGDGRYPSQ-------WC-------------GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 (429)
T ss_dssp EEECCTTCTHH-------HH-------------TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHH
T ss_pred EEeCchhhchh-------hc-------------ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHH
Confidence 77777654320 00 3468999999988643 136799
Q ss_pred HHHHcccCCeEEEEecC---CCCcHHHHHHHHHhh
Q 047371 168 HIVSYAKPGAVVGISGI---LSEQLPRIINRYSEF 199 (222)
Q Consensus 168 ~~~~~LkpgG~l~~~~~---~~~~~~~~~~~~~~~ 199 (222)
.+.++|||||.+++++. ..++...+...+..+
T Consensus 359 ~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp HHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred HHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 99999999999998643 234444555566554
No 200
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.43 E-value=3.5e-13 Score=110.36 Aligned_cols=85 Identities=24% Similarity=0.277 Sum_probs=65.3
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++..+++. .++.+...|...... ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~------~~----- 132 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS-DLIKVVKVPQKTLLM------DA----- 132 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTCSST------TT-----
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC-ccEEEEEcchhhhhh------hh-----
Confidence 5779999999999999888764 4579999999999999999999988875 368898887643100 00
Q ss_pred ccccccCCCC--CCCeeEEEecccccc
Q 047371 137 SSHEIRGISE--TEEYDVVIANILLNP 161 (222)
Q Consensus 137 ~~~~~~~~~~--~~~~D~v~~~~~~~~ 161 (222)
+.. +++||+|++|+|++.
T Consensus 133 -------~~~~~~~~fD~i~~npp~~~ 152 (254)
T 2h00_A 133 -------LKEESEIIYDFCMCNPPFFA 152 (254)
T ss_dssp -------STTCCSCCBSEEEECCCCC-
T ss_pred -------hhcccCCcccEEEECCCCcc
Confidence 001 258999999988764
No 201
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.43 E-value=4.8e-13 Score=111.64 Aligned_cols=130 Identities=11% Similarity=0.081 Sum_probs=85.3
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC----------------------------C
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP----------------------------K 109 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~----------------------------~ 109 (222)
++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|++++....... .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 678999999999996555555445799999999999999988654321000 0
Q ss_pred ceeEEecCCcc-cccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHHHHHHHHcccCCeEEEE
Q 047371 110 KIKLHLVPDRT-FTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 110 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~~~~LkpgG~l~~ 181 (222)
.+.+...|... .+. . ....+.++||+|+++..+++ ...+++++.++|||||++++
T Consensus 151 ~~~~~~~D~~~~~~~------~-----------~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 151 VKRVLPIDVHQPQPL------G-----------AGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp EEEEECCCTTSSSTT------C-----------SSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hceEEecccCCCCCc------c-----------ccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 02233334332 100 0 00013567999999988876 34579999999999999998
Q ss_pred ecC---------------CCCcHHHHHHHHHhh-hhcce
Q 047371 182 SGI---------------LSEQLPRIINRYSEF-LEDIL 204 (222)
Q Consensus 182 ~~~---------------~~~~~~~~~~~~~~~-~~~~~ 204 (222)
... ......++.+.+.+. |..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 214 IGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp EEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred EEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 532 123567777777664 55444
No 202
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.43 E-value=8.4e-13 Score=110.59 Aligned_cols=108 Identities=15% Similarity=0.285 Sum_probs=82.5
Q ss_pred HHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 47 LCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 47 ~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
.+..++... ..++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++....+.. .++++...|...+
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~D~~~~---- 89 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVA-SKLQVLVGDVLKT---- 89 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEEESCTTTS----
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCC-CceEEEEcceecc----
Confidence 333444333 4578899999999999999999885 68999999999999999988665543 3788888887654
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHH--------------------HHcccCCeEEE
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHI--------------------VSYAKPGAVVG 180 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~--------------------~~~LkpgG~l~ 180 (222)
+...||+|++|+|++....++..+ ++.++|||.++
T Consensus 90 --------------------~~~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 --------------------DLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp --------------------CCCCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred --------------------cchhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 233799999999998765544333 25789998764
No 203
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.42 E-value=6.1e-13 Score=118.34 Aligned_cols=119 Identities=15% Similarity=0.159 Sum_probs=89.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++.+|||+|||+|..+..+++. +.++|+|+|+++.+++.+++++...++. +.+...|...+.. .
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~---v~~~~~Da~~l~~--------~- 166 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP---LAVTQAPPRALAE--------A- 166 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC---CEEECSCHHHHHH--------H-
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe---EEEEECCHHHhhh--------h-
Confidence 457899999999999999999875 3468999999999999999999988863 6677766544310 0
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-------------------------HHHHHHHHHHcccCCeEEEEecC--CC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-------------------------LPQLADHIVSYAKPGAVVGISGI--LS 186 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~l~~~~~--~~ 186 (222)
..++||+|++|+|+.. ...+++.+.++|||||.+++++. ..
T Consensus 167 ------------~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 167 ------------FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp ------------HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred ------------ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 2467999999988631 15689999999999999988533 23
Q ss_pred C-cHHHHHHHHHh
Q 047371 187 E-QLPRIINRYSE 198 (222)
Q Consensus 187 ~-~~~~~~~~~~~ 198 (222)
. +...+...+..
T Consensus 235 eEne~vv~~~l~~ 247 (464)
T 3m6w_A 235 EENEGVVAHFLKA 247 (464)
T ss_dssp GGTHHHHHHHHHH
T ss_pred hcCHHHHHHHHHH
Confidence 3 33444444443
No 204
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.42 E-value=9.8e-13 Score=112.82 Aligned_cols=116 Identities=20% Similarity=0.171 Sum_probs=88.3
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-CC-----CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-GA-----AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-~~-----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
++.+|||+|||+|.++..+++. +. .+++|+|+++.+++.|+.++...++ ++.+...|.....
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~---~~~i~~~D~l~~~--------- 197 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ---KMTLLHQDGLANL--------- 197 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC---CCEEEESCTTSCC---------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC---CceEEECCCCCcc---------
Confidence 4679999999999999988764 21 6899999999999999999887775 4566666653220
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccH---------------------HHHHHHHHHcccCCeEEEEec----CCC
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPL---------------------PQLADHIVSYAKPGAVVGISG----ILS 186 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~---------------------~~~l~~~~~~LkpgG~l~~~~----~~~ 186 (222)
..++||+|++|||+... ..+++++.+.|||||++++.. +..
T Consensus 198 --------------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~ 263 (344)
T 2f8l_A 198 --------------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGT 263 (344)
T ss_dssp --------------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGS
T ss_pred --------------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCC
Confidence 35689999999996432 247999999999999988853 234
Q ss_pred CcHHHHHHHHHhh
Q 047371 187 EQLPRIINRYSEF 199 (222)
Q Consensus 187 ~~~~~~~~~~~~~ 199 (222)
.+...+.+.+.+.
T Consensus 264 ~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 264 SDFAKVDKFIKKN 276 (344)
T ss_dssp TTHHHHHHHHHHH
T ss_pred chHHHHHHHHHhC
Confidence 5556777766654
No 205
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.42 E-value=6e-12 Score=107.83 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=102.6
Q ss_pred cC-CCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KG-GELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~-~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+ +.+|||+|||+|.++..+++. +..+++++|+ +.+++.|+++....++. +++++...|...... .
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~--------~-- 244 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG-GRVEFFEKNLLDARN--------F-- 244 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG-GGEEEEECCTTCGGG--------G--
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC-CceEEEeCCcccCcc--------c--
Confidence 45 789999999999999988875 5679999999 88999999998877765 478898888754310 0
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCC------------------------
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGIL------------------------ 185 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~------------------------ 185 (222)
..+.||+|++...+++. ..+++++.+.|||||.+++.+..
T Consensus 245 -----------~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
T 3mcz_A 245 -----------EGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNH 313 (352)
T ss_dssp -----------TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTT
T ss_pred -----------CCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCC
Confidence 24569999998888752 46899999999999999985421
Q ss_pred --CCcHHHHHHHHHhh-hhcceecccCCceEeecccCC
Q 047371 186 --SEQLPRIINRYSEF-LEDILVSEKDDWRCVSGTKFS 220 (222)
Q Consensus 186 --~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~~k~~ 220 (222)
.....++.+.+++. |..++ ...+.|..+.++|.+
T Consensus 314 ~~~~t~~e~~~ll~~aGf~~~~-~~~g~~~l~~a~kp~ 350 (352)
T 3mcz_A 314 GELHPTPWIAGVVRDAGLAVGE-RSIGRYTLLIGQRSS 350 (352)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEE-EEETTEEEEEEECCC
T ss_pred CCcCCHHHHHHHHHHCCCceee-eccCceEEEEEecCC
Confidence 11233444444443 55554 345678777777754
No 206
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.42 E-value=3.5e-12 Score=100.64 Aligned_cols=106 Identities=24% Similarity=0.359 Sum_probs=76.6
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++. ++++...|...+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~~~~--------------- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEI--------------- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGC---------------
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcHHHC---------------
Confidence 3678999999999999999988876689999999999999998864 456777765433
Q ss_pred ccccccCCCCCCCeeEEEeccccccHH-----HHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHh
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLP-----QLADHIVSYAKPGAVVGISGILSEQLPRIINRYSE 198 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~-----~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 198 (222)
+ ++||+|++|+++++.. .+++.+.+.+ |.+++.+.. .....+.+.+..
T Consensus 108 ---------~-~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~-~~~~~~~~~~~~ 160 (200)
T 1ne2_A 108 ---------S-GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGNA-KARDFLRREFSA 160 (200)
T ss_dssp ---------C-CCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEEEEG-GGHHHHHHHHHH
T ss_pred ---------C-CCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEEEcC-chHHHHHHHHHH
Confidence 3 5799999999987643 4788888887 455554322 333444444433
No 207
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.41 E-value=1.2e-11 Score=107.05 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=83.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++...|.... .
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~-~~v~~~~~d~~~~-~------------ 265 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA-DRCEILPGDFFET-I------------ 265 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEEECCTTTC-C------------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC-CceEEeccCCCCC-C------------
Confidence 45789999999999999988875 5678999999 99999999999887775 5899988876421 0
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+. .||+|++...+++. ..+++++.+.|||||++++.+.
T Consensus 266 ----------p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 266 ----------PD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp ----------CS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred ----------CC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 33 79999998887653 2589999999999999998543
No 208
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.41 E-value=6.5e-12 Score=106.66 Aligned_cols=103 Identities=21% Similarity=0.256 Sum_probs=84.1
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+++++|++ .+++.|++++...++. .++++...|.....
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~------------- 228 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA-SRYHTIAGSAFEVD------------- 228 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG-GGEEEEESCTTTSC-------------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC-cceEEEecccccCC-------------
Confidence 56789999999999999988875 55799999999 9999999998877765 47889888765432
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+.||+|++..++++. ..+++++.+.|+|||++++.+.
T Consensus 229 ----------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 229 ----------YGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp ----------CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----------CCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 12349999998777653 4689999999999999888644
No 209
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.41 E-value=9.3e-12 Score=107.10 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=83.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. .++++...|....
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------------- 252 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA-DRMRGIAVDIYKE------------- 252 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT-TTEEEEECCTTTS-------------
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC-CCEEEEeCccccC-------------
Confidence 356789999999999999998875 4569999999 99999999999887765 3688988877543
Q ss_pred ccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+...+|+|++...+++ ...+++++.+.|||||.+++.+
T Consensus 253 -----------~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 253 -----------SYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp -----------CCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred -----------CCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2223499999888865 3557999999999999998754
No 210
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.41 E-value=7.7e-12 Score=107.92 Aligned_cols=103 Identities=16% Similarity=0.046 Sum_probs=83.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++...|.... .
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~----------- 245 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA-DRVTVAEGDFFKP-L----------- 245 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEEECCTTSC-C-----------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC-CceEEEeCCCCCc-C-----------
Confidence 346789999999999999998875 4579999999 99999999999887765 4788888876431 0
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+. .||+|+++..+++. ..+++++.+.|||||++++.+.
T Consensus 246 -----------~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 -----------PV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -----------SC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -----------CC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 32 39999998888652 3689999999999999998655
No 211
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.41 E-value=8.8e-13 Score=110.36 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=75.0
Q ss_pred CCCcEEEEccCCCHHHHHHH----H-hCCCE--EEEEeCChHHHHHHHHHHHhc-CCCCCceeEEecCCc--cccccccc
Q 047371 58 GGELFLDYGTGSGILGIAAI----K-FGAAM--FVGVDIDPQVIKSAHQNAALN-NIGPKKIKLHLVPDR--TFTASMNE 127 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la----~-~~~~~--v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~~~~--~~~~~~~~ 127 (222)
++.+|||+|||+|.++..++ . .+... ++|+|.|+.|++.|++++... ++. ++.+...+.. .+.. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~--~v~~~~~~~~~~~~~~---~ 126 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE--NVKFAWHKETSSEYQS---R 126 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT--TEEEEEECSCHHHHHH---H
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC--cceEEEEecchhhhhh---h
Confidence 46799999999998765332 2 23454 499999999999999987643 443 5555443322 1100 0
Q ss_pred ccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
...+. ++++||+|+++..+++ ....+++++++|||||.+++..
T Consensus 127 ~~~~~-------------~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 127 MLEKK-------------ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HHTTT-------------CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hcccc-------------CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 00001 4678999999998887 4568999999999999999863
No 212
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.41 E-value=1.8e-13 Score=114.86 Aligned_cols=109 Identities=11% Similarity=0.079 Sum_probs=78.6
Q ss_pred HHHHHHhh-h-cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeE-EecCCcccccc
Q 047371 48 CLLLLQSL-I-KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKL-HLVPDRTFTAS 124 (222)
Q Consensus 48 ~~~~l~~~-~-~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~-~~~~~~~~~~~ 124 (222)
+..++..+ + .++.+|||+|||+|.++..+++.+..+|+|+|+++.|++.+.++- .++.. ...+...+..
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~-------~rv~~~~~~ni~~l~~- 144 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD-------DRVRSMEQYNFRYAEP- 144 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC-------TTEEEECSCCGGGCCG-
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------cccceecccCceecch-
Confidence 44455444 2 357899999999999999999888789999999999998854421 12211 1112211110
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
..+ +..+||+++++..++++..++.++.++|||||.+++.
T Consensus 145 -----~~l-------------~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 145 -----VDF-------------TEGLPSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -----GGC-------------TTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred -----hhC-------------CCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 001 3445999999999999999999999999999999885
No 213
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.41 E-value=1.1e-12 Score=104.77 Aligned_cols=102 Identities=15% Similarity=0.232 Sum_probs=75.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHH----HHHhcCCCCCceeEEecCCcccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQ----NAALNNIGPKKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
.+++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.+.+ +....++. ++.+...|...+..
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~--~v~~~~~d~~~l~~------- 95 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP--NLLYLWATAERLPP------- 95 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT--TEEEEECCSTTCCS-------
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC--ceEEEecchhhCCC-------
Confidence 457889999999999999999886 35899999999998886433 33334443 78898888866532
Q ss_pred cchhccccccccCCCCCCCeeEEEeccccccH--------HHHHHHHHHcccCCeEEEEe
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILLNPL--------PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~--------~~~l~~~~~~LkpgG~l~~~ 182 (222)
+.+. |.+++..+.... ..+++++.++|||||.+++.
T Consensus 96 ---------------~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 96 ---------------LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ---------------CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred ---------------CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 3444 666654433221 57899999999999999984
No 214
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.40 E-value=5.7e-13 Score=107.41 Aligned_cols=110 Identities=17% Similarity=0.285 Sum_probs=83.9
Q ss_pred HHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh-CC------CEEEEEeCChHHHHHHHHHHHhcC-----CCCCceeEEe
Q 047371 48 CLLLLQSLIKGGELFLDYGTGSGILGIAAIKF-GA------AMFVGVDIDPQVIKSAHQNAALNN-----IGPKKIKLHL 115 (222)
Q Consensus 48 ~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~~------~~v~gvD~s~~~l~~a~~~~~~~~-----~~~~~v~~~~ 115 (222)
+.+.+...++++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.|++++...+ .. ++.+..
T Consensus 74 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~--~v~~~~ 151 (227)
T 1r18_A 74 ALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG--QLLIVE 151 (227)
T ss_dssp HHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT--SEEEEE
T ss_pred HHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC--ceEEEE
Confidence 34444333567899999999999999988874 32 589999999999999999887654 32 677877
Q ss_pred cCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 116 VPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.|.... +...++||+|+++.+++++ .+.+.++|||||.+++...
T Consensus 152 ~d~~~~----------------------~~~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 152 GDGRKG----------------------YPPNAPYNAIHVGAAAPDT---PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp SCGGGC----------------------CGGGCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEEES
T ss_pred CCcccC----------------------CCcCCCccEEEECCchHHH---HHHHHHHhcCCCEEEEEEe
Confidence 766431 1123689999998887753 4788999999999999743
No 215
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.40 E-value=2.1e-12 Score=114.51 Aligned_cols=137 Identities=20% Similarity=0.215 Sum_probs=100.0
Q ss_pred cCCcchhHHHHHHHHhhhc--CCCcEEEEccCCCHHHHHHHHh--------------CCCEEEEEeCChHHHHHHHHHHH
Q 047371 39 TGEHATTKLCLLLLQSLIK--GGELFLDYGTGSGILGIAAIKF--------------GAAMFVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~--~~~~vLD~G~G~G~~~~~la~~--------------~~~~v~gvD~s~~~l~~a~~~~~ 102 (222)
.|.+.+++.+.+++.+.+. ++.+|+|+|||+|.++..+++. ...+++|+|+++.+++.|+.++.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 4566777777777766643 4679999999999999887753 23579999999999999999998
Q ss_pred hcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccH--------------------
Q 047371 103 LNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL-------------------- 162 (222)
Q Consensus 103 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-------------------- 162 (222)
.+++...+..+..+|..... ...+||+|++|||+...
T Consensus 230 l~g~~~~~~~i~~gD~l~~~-----------------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~ 286 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKE-----------------------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQ 286 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSC-----------------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHH
T ss_pred HhCCCcCCCCEeeCCCCCCc-----------------------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchH
Confidence 88874224566666654321 23489999999998641
Q ss_pred HHHHHHHHHcccCCeEEEEecC-----CCCcHHHHHHHHHh
Q 047371 163 PQLADHIVSYAKPGAVVGISGI-----LSEQLPRIINRYSE 198 (222)
Q Consensus 163 ~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~~~~~ 198 (222)
..+++++.+.|||||++++... .......+++.+.+
T Consensus 287 ~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~ 327 (445)
T 2okc_A 287 LNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQ 327 (445)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHh
Confidence 2579999999999999887421 12234566665544
No 216
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.40 E-value=2.4e-12 Score=102.67 Aligned_cols=101 Identities=26% Similarity=0.354 Sum_probs=77.4
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++ . ++.+...+...+..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~---~-----~~~~~~~~~~~~~~------------- 108 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRG-IEAVGVDGDRTLVDAARAA---G-----AGEVHLASYAQLAE------------- 108 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHT---C-----SSCEEECCHHHHHT-------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCC-CEEEEEcCCHHHHHHHHHh---c-----ccccchhhHHhhcc-------------
Confidence 467999999999999999998885 5899999999999999886 1 34455555433310
Q ss_pred ccccccCCCCCCCeeEEEeccccc--cHHHHHHHHHHcccCCeEEEEecC
Q 047371 137 SSHEIRGISETEEYDVVIANILLN--PLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.......+||+|+++.+++ ....+++++.++|||||++++...
T Consensus 109 -----~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 109 -----AKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp -----TCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -----cccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 0011455699999987766 256789999999999999999643
No 217
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.40 E-value=9.8e-12 Score=105.81 Aligned_cols=101 Identities=15% Similarity=0.044 Sum_probs=83.2
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++...|.... .
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~------------- 232 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS-GRAQVVVGSFFDP-L------------- 232 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEEECCTTSC-C-------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC-cCeEEecCCCCCC-C-------------
Confidence 4579999999999999988864 5678999999 99999999998887775 4899988876421 0
Q ss_pred ccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+. +||+|++...+++. ..+++++++.|||||++++.+.
T Consensus 233 ---------p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 233 ---------PA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp ---------CC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ---------CC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 33 79999998888752 4589999999999999998654
No 218
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.40 E-value=3.6e-12 Score=104.98 Aligned_cols=116 Identities=17% Similarity=0.198 Sum_probs=86.8
Q ss_pred hHHHHHHHHhhh-cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccc
Q 047371 45 TKLCLLLLQSLI-KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122 (222)
Q Consensus 45 ~~~~~~~l~~~~-~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~ 122 (222)
...+..++...+ .++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|+++. .++.+...+...+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~ 143 (269)
T 1p91_A 71 RDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASSHRLP 143 (269)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTSCS
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcchhhCC
Confidence 334444554443 57889999999999999998876 4579999999999999998764 25667777765442
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHH
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRII 193 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 193 (222)
. ++++||+|+++... ..++++.++|||||.+++.........++.
T Consensus 144 ~----------------------~~~~fD~v~~~~~~----~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 188 (269)
T 1p91_A 144 F----------------------SDTSMDAIIRIYAP----CKAEELARVVKPGGWVITATPGPRHLMELK 188 (269)
T ss_dssp B----------------------CTTCEEEEEEESCC----CCHHHHHHHEEEEEEEEEEEECTTTTHHHH
T ss_pred C----------------------CCCceeEEEEeCCh----hhHHHHHHhcCCCcEEEEEEcCHHHHHHHH
Confidence 2 56789999986653 357889999999999999766555544443
No 219
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.39 E-value=4e-12 Score=99.64 Aligned_cols=123 Identities=17% Similarity=0.233 Sum_probs=84.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CC---------CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEE-ecCCcccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GA---------AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLH-LVPDRTFTAS 124 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~---------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~-~~~~~~~~~~ 124 (222)
++++.+|||+|||+|.++..+++. +. .+++|+|+++.. .+ .++.+. ..|......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~--~~~~~~~~~d~~~~~~- 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL--EGATFLCPADVTDPRT- 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC--TTCEEECSCCTTSHHH-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC--CCCeEEEeccCCCHHH-
Confidence 578899999999999999999876 43 789999999831 12 255666 555433210
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecccccc--------------HHHHHHHHHHcccCCeEEEEecCCCCcHH
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------------LPQLADHIVSYAKPGAVVGISGILSEQLP 190 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 190 (222)
...... ..+.++||+|+++.+.+. ...+++.+.++|||||.+++..+......
T Consensus 86 -~~~~~~------------~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~ 152 (196)
T 2nyu_A 86 -SQRILE------------VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSR 152 (196)
T ss_dssp -HHHHHH------------HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGH
T ss_pred -HHHHHH------------hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHH
Confidence 000000 003457999999764432 13678999999999999999877666777
Q ss_pred HHHHHHHhhhhccee
Q 047371 191 RIINRYSEFLEDILV 205 (222)
Q Consensus 191 ~~~~~~~~~~~~~~~ 205 (222)
++...+...|..+..
T Consensus 153 ~~~~~l~~~f~~v~~ 167 (196)
T 2nyu_A 153 RLQRRLTEEFQNVRI 167 (196)
T ss_dssp HHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHhcceEE
Confidence 777777776544443
No 220
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.38 E-value=5.4e-12 Score=105.56 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=91.9
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcC--CCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNN--IGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.+++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++...+ +...++++...|+..+.. .
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------~ 147 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE--------N 147 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH--------H
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH--------h
Confidence 356789999999999999999876 45799999999999999999875432 222478888887654311 0
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc-----H--HHHHHHHHHcccCCeEEEEecCC----CCcHHHHHHHHHhhhh
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP-----L--PQLADHIVSYAKPGAVVGISGIL----SEQLPRIINRYSEFLE 201 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~--~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~~~~~~~ 201 (222)
..++||+|+++.+... + ..+++.+.+.|+|||.+++.... ......+.+.+.+.|.
T Consensus 148 -------------~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 214 (283)
T 2i7c_A 148 -------------VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFK 214 (283)
T ss_dssp -------------CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCS
T ss_pred -------------CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCC
Confidence 2567999999764221 1 68899999999999999986321 1233455566666555
Q ss_pred cc
Q 047371 202 DI 203 (222)
Q Consensus 202 ~~ 203 (222)
..
T Consensus 215 ~v 216 (283)
T 2i7c_A 215 KV 216 (283)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 221
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.38 E-value=5.9e-12 Score=100.81 Aligned_cols=98 Identities=11% Similarity=0.147 Sum_probs=76.5
Q ss_pred HHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccc
Q 047371 50 LLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERV 129 (222)
Q Consensus 50 ~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (222)
..+.... ++.+|||+|||+|.++..++.. +|+|+++.+++.++++ ++.+...+...+..
T Consensus 40 ~~l~~~~-~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~---------~~~~~~~d~~~~~~------ 98 (219)
T 1vlm_A 40 QAVKCLL-PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR---------GVFVLKGTAENLPL------ 98 (219)
T ss_dssp HHHHHHC-CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT---------TCEEEECBTTBCCS------
T ss_pred HHHHHhC-CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc---------CCEEEEcccccCCC------
Confidence 3444444 4889999999999999877543 9999999999999876 34566666544321
Q ss_pred ccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 130 DGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.++||+|+++..+++ ...+++++.++|+|||.+++...
T Consensus 99 ----------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 99 ----------------KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp ----------------CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------------CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 4678999999888765 46789999999999999998643
No 222
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.38 E-value=1.4e-11 Score=105.90 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=83.3
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++...|.....
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~------------- 246 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS-DRVDVVEGDFFEPL------------- 246 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT-TTEEEEECCTTSCC-------------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC-CceEEEeCCCCCCC-------------
Confidence 46789999999999999988875 4578999999 99999999999887765 47888888764310
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
+. .||+|+++..+++. ..+++++.+.|||||.+++.+..
T Consensus 247 ----------~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 ----------PR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ----------SS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----------CC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 22 49999998887652 36899999999999999986543
No 223
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.37 E-value=1.8e-12 Score=105.58 Aligned_cols=102 Identities=12% Similarity=0.009 Sum_probs=77.6
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-----CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-----GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.|+. +. .++++..+|...... .+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~-~~v~~~~gD~~~~~~------l~~ 147 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DM-ENITLHQGDCSDLTT------FEH 147 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GC-TTEEEEECCSSCSGG------GGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cC-CceEEEECcchhHHH------HHh
Confidence 5789999999999999998875 45799999999999888761 11 378888888754310 000
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHH-cccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVS-YAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 184 (222)
....+||+|+++..-..+..++.++.+ +|||||++++...
T Consensus 148 ------------~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 148 ------------LREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp ------------GSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ------------hccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 023479999987654456778999997 9999999999643
No 224
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.37 E-value=4.3e-13 Score=109.22 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=72.9
Q ss_pred HHHHHHhh--hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 48 CLLLLQSL--IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 48 ~~~~l~~~--~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
+..++..+ ..++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|+++....... .+..+.......+
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~-~~~~~~~~~~~~~---- 99 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM-EQFNFRNAVLADF---- 99 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE-CSCCGGGCCGGGC----
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc-ccceEEEeCHhHc----
Confidence 34444444 2346799999999999999999887679999999999999887653221100 0001111110000
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+...+|.+.++..+..+..+++++.++|||||.+++.
T Consensus 100 --------------------~~~~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 100 --------------------EQGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp --------------------CSCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred --------------------CcCCCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 1222455666655656688999999999999999885
No 225
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.37 E-value=4.6e-12 Score=110.16 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=83.9
Q ss_pred CCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhc---------------CCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALN---------------NIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~---------------~~~~~~v~~~~~~~~~~ 121 (222)
++.+|||+|||+|.+++.+++. +..+|+++|+++.+++.+++|+..+ ++. ++++...|+..+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~--~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK--TIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS--EEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC--ceEEEcCcHHHH
Confidence 6899999999999999998886 6678999999999999999999988 664 477877776544
Q ss_pred ccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 122 TASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
.. . ..++||+|+++|+. ...++++.+.+.||+||.+++++
T Consensus 125 ~~-------------------~--~~~~fD~I~lDP~~-~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MA-------------------E--RHRYFHFIDLDPFG-SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HH-------------------H--STTCEEEEEECCSS-CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HH-------------------h--ccCCCCEEEeCCCC-CHHHHHHHHHHhcCCCCEEEEEe
Confidence 21 0 13579999988754 35789999999999999988864
No 226
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.37 E-value=4e-12 Score=101.25 Aligned_cols=120 Identities=13% Similarity=0.187 Sum_probs=89.5
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..++ .+++|+|+++. ++.+...+......
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~-----------------~~~~~~~d~~~~~~------------- 111 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL-----------------DPRVTVCDMAQVPL------------- 111 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS-----------------STTEEESCTTSCSC-------------
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC-----------------CceEEEeccccCCC-------------
Confidence 467899999999999988762 68999999986 23355566544321
Q ss_pred ccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEecCCC--CcHHHHHHHHHhh-hhcceec-ccCC
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISGILS--EQLPRIINRYSEF-LEDILVS-EKDD 210 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~-~~~~~~~-~~~~ 210 (222)
+.++||+|+++..+++ ...+++++.++|+|||.+++.+... ....++.+.++.. |..+... ..+.
T Consensus 112 ---------~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 182 (215)
T 2zfu_A 112 ---------EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSH 182 (215)
T ss_dssp ---------CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCSTT
T ss_pred ---------CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCCe
Confidence 5678999999887764 5678999999999999999975543 4667788888775 6655543 3456
Q ss_pred ceEeecccC
Q 047371 211 WRCVSGTKF 219 (222)
Q Consensus 211 w~~~~~~k~ 219 (222)
|..+..+|.
T Consensus 183 ~~~~~~~k~ 191 (215)
T 2zfu_A 183 FFLFDFQKT 191 (215)
T ss_dssp CEEEEEEEC
T ss_pred EEEEEEEec
Confidence 777777764
No 227
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.36 E-value=4.2e-12 Score=105.17 Aligned_cols=134 Identities=10% Similarity=-0.079 Sum_probs=93.2
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh--cCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL--NNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+.+++|||+|||+|.++..+++.+ .+++++|+++.+++.|++++.. .++...++++...|+..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~------------- 136 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD------------- 136 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC-------------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH-------------
Confidence 456899999999999999888776 8999999999999999887643 122234777877765433
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec-CCCC---cHHHHHHHHHhhhhcceecc---
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG-ILSE---QLPRIINRYSEFLEDILVSE--- 207 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~--- 207 (222)
. ++||+|+++..- + ..+++.+.+.|+|||.+++.. .... ....+.+.+...|.......
T Consensus 137 -----------~-~~fD~Ii~d~~d-p-~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~v 202 (262)
T 2cmg_A 137 -----------I-KKYDLIFCLQEP-D-IHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPL 202 (262)
T ss_dssp -----------C-CCEEEEEESSCC-C-HHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTT
T ss_pred -----------H-hhCCEEEECCCC-h-HHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEcc
Confidence 2 679999998532 2 348999999999999999852 2211 23444555555554433222
Q ss_pred --cCCceEeeccc
Q 047371 208 --KDDWRCVSGTK 218 (222)
Q Consensus 208 --~~~w~~~~~~k 218 (222)
.+.|.-+.++|
T Consensus 203 P~~g~~~~~~as~ 215 (262)
T 2cmg_A 203 RILSNKGYIYASF 215 (262)
T ss_dssp CTTCCEEEEEEES
T ss_pred CCCcccEEEEeeC
Confidence 45666545554
No 228
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.36 E-value=6.2e-12 Score=100.42 Aligned_cols=98 Identities=26% Similarity=0.273 Sum_probs=77.4
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++.. .+...+..... .+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~---------~~~~~d~~~~~-------~~~---- 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLD---------HVVLGDIETMD-------MPY---- 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSS---------EEEESCTTTCC-------CCS----
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCC---------cEEEcchhhcC-------CCC----
Confidence 478899999999999999998885 899999999999999987531 35555553321 001
Q ss_pred ccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEecC
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
++++||+|+++..+++ ...+++++.+.|+|||.+++...
T Consensus 90 ---------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 90 ---------EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp ---------CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred ---------CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4578999999888766 46789999999999999999643
No 229
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.35 E-value=5.6e-12 Score=106.28 Aligned_cols=84 Identities=20% Similarity=0.333 Sum_probs=66.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++...++. ++++...|...+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~--~v~~~~~D~~~~-------------- 102 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYN--NLEVYEGDAIKT-------------- 102 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCC--CEEC----CCSS--------------
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEECchhhC--------------
Confidence 4578899999999999999998874 69999999999999999998766653 788888877554
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHH
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLA 166 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l 166 (222)
+..+||+|++|+|++.....+
T Consensus 103 ----------~~~~~D~Vv~n~py~~~~~~~ 123 (299)
T 2h1r_A 103 ----------VFPKFDVCTANIPYKISSPLI 123 (299)
T ss_dssp ----------CCCCCSEEEEECCGGGHHHHH
T ss_pred ----------CcccCCEEEEcCCcccccHHH
Confidence 344799999999998755543
No 230
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.34 E-value=5.9e-12 Score=109.77 Aligned_cols=104 Identities=19% Similarity=0.175 Sum_probs=85.3
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCc-eeEEecCCcccccccccccccch
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKK-IKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++.+|||++||+|.+++.+++. +..+|+++|+++.+++.+++|+..+++. .+ +.+...|+..+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-~~~v~v~~~Da~~~l----------- 118 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-EDRYEIHGMEANFFL----------- 118 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHH-----------
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-CceEEEEeCCHHHHH-----------
Confidence 36889999999999999998875 4478999999999999999999999986 24 888887764431
Q ss_pred hcccccccc-CCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIR-GISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~-~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
. . ..++||+|+++| +....++++.+.+.|++||.+++++
T Consensus 119 --------~~~--~~~~fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 119 --------RKE--WGFGFDYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp --------HSC--CSSCEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------HHh--hCCCCcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 0 0 135799999998 4445679999999999999999875
No 231
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.34 E-value=1.4e-11 Score=106.38 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=83.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...++. +++++...|...... ++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-------~~--- 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS-ERIHGHGANLLDRDV-------PF--- 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG-GGEEEEECCCCSSSC-------CC---
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc-cceEEEEccccccCC-------CC---
Confidence 46789999999999999988874 5679999999 99999999998877764 478898887654210 00
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+ ++||+|++...+++. ..+++++.+.|||||.+++.+.
T Consensus 246 ----------p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 246 ----------P-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ----------C-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ----------C-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 3 679999998888642 3579999999999999988543
No 232
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.33 E-value=4.3e-11 Score=99.62 Aligned_cols=111 Identities=19% Similarity=0.180 Sum_probs=82.3
Q ss_pred CCcEEEEccCC---CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc--cccccc
Q 047371 59 GELFLDYGTGS---GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN--ERVDGV 132 (222)
Q Consensus 59 ~~~vLD~G~G~---G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~ 132 (222)
..+|||+|||+ |.++..+.+. +..+|+++|+|+.+++.|++++... .++.+...|.....+-.. +....+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD----PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC----TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC----CCeEEEEeeCCCchhhhccchhhccC
Confidence 47999999999 9887766654 5579999999999999999987431 378888888754311000 000001
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecCCC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
+..+||+|+++..++++ ..+++++.+.|||||+++++....
T Consensus 154 -------------d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 -------------DFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp -------------CTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred -------------CCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 33579999999888763 568999999999999999976554
No 233
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.33 E-value=5.4e-12 Score=103.65 Aligned_cols=135 Identities=15% Similarity=0.154 Sum_probs=98.6
Q ss_pred CCcchhHHHHHHHHhh-------hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCce
Q 047371 40 GEHATTKLCLLLLQSL-------IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKI 111 (222)
Q Consensus 40 ~~~~~~~~~~~~l~~~-------~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v 111 (222)
+.|.+++..+..++.+ +.+..+|||+|||.|-++..++.. +..+|+++|+++.+++.++.++..+++. .
T Consensus 107 ~~H~STreRLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~---~ 183 (281)
T 3lcv_B 107 SVHISTRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP---H 183 (281)
T ss_dssp TTSHHHHHHGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC---E
T ss_pred hcCCCHHHHhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC---c
Confidence 4567777766666644 345789999999999999988765 7789999999999999999999988864 4
Q ss_pred eEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHH----HHHHHHHcccCCeEEEEecC--C
Q 047371 112 KLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQ----LADHIVSYAKPGAVVGISGI--L 185 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~----~l~~~~~~LkpgG~l~~~~~--~ 185 (222)
.+...|...-. +.+++|+++++-.++++.+ .+-.+...|+++|.++.... .
T Consensus 184 ~~~v~D~~~~~-----------------------p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl 240 (281)
T 3lcv_B 184 RTNVADLLEDR-----------------------LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSL 240 (281)
T ss_dssp EEEECCTTTSC-----------------------CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC--
T ss_pred eEEEeeecccC-----------------------CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhh
Confidence 55555543221 6788999999999988754 23389999999999988544 4
Q ss_pred CCcHHHHHHHHHhhh
Q 047371 186 SEQLPRIINRYSEFL 200 (222)
Q Consensus 186 ~~~~~~~~~~~~~~~ 200 (222)
.....-+.+.|+..|
T Consensus 241 ~Grs~gm~~~Y~~~~ 255 (281)
T 3lcv_B 241 GQRSKGMFQNYSQSF 255 (281)
T ss_dssp -----CHHHHHHHHH
T ss_pred cCCCcchhhHHHHHH
Confidence 444444555555554
No 234
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.32 E-value=1.3e-11 Score=102.78 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=72.4
Q ss_pred CCCcEEEEccCCCH----HHHHHHHh-C----CCEEEEEeCChHHHHHHHHHHHhc----CCC---------------C-
Q 047371 58 GGELFLDYGTGSGI----LGIAAIKF-G----AAMFVGVDIDPQVIKSAHQNAALN----NIG---------------P- 108 (222)
Q Consensus 58 ~~~~vLD~G~G~G~----~~~~la~~-~----~~~v~gvD~s~~~l~~a~~~~~~~----~~~---------------~- 108 (222)
++.+|||+|||+|. +++.+++. + ..+|+|+|+|+.+++.|++++... ++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45789999999997 56666654 3 258999999999999999875210 000 0
Q ss_pred ---------CceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHccc
Q 047371 109 ---------KKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAK 174 (222)
Q Consensus 109 ---------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~Lk 174 (222)
.++.|...+....+ +...++||+|+|...+.+ ...+++.+++.|+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~---------------------~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~ 243 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ---------------------YNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK 243 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS---------------------CCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE
T ss_pred ceeechhhcccCeEEecccCCCC---------------------CCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhC
Confidence 13445544443211 112468999999766544 2568999999999
Q ss_pred CCeEEEEe
Q 047371 175 PGAVVGIS 182 (222)
Q Consensus 175 pgG~l~~~ 182 (222)
|||++++.
T Consensus 244 pgG~L~lg 251 (274)
T 1af7_A 244 PDGLLFAG 251 (274)
T ss_dssp EEEEEEEC
T ss_pred CCcEEEEE
Confidence 99999983
No 235
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.31 E-value=3.9e-11 Score=101.60 Aligned_cols=122 Identities=11% Similarity=0.021 Sum_probs=88.0
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++|.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++..+++. ++.+...|...+...
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~--~v~~~~~D~~~~~~~--------- 168 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS--CCELAEEDFLAVSPS--------- 168 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCGGGSCTT---------
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEEeCChHhcCcc---------
Confidence 467899999999999999998874 4579999999999999999999998875 788888876544210
Q ss_pred hccccccccCCCCCCCeeEEEecccccc---------------------------HHHHHHHHHHcccCCeEEEEecC--
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP---------------------------LPQLADHIVSYAKPGAVVGISGI-- 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------------------------~~~~l~~~~~~LkpgG~l~~~~~-- 184 (222)
.....+||.|++++|+.. ..+++..+.++++ ||.+++++.
T Consensus 169 ----------~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 169 ----------DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp ----------CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred ----------ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 001246999999887621 1135777888887 888887533
Q ss_pred C-CCcHHHHHHHHHhh
Q 047371 185 L-SEQLPRIINRYSEF 199 (222)
Q Consensus 185 ~-~~~~~~~~~~~~~~ 199 (222)
. .++...+...+.++
T Consensus 238 ~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 238 CQEENEDVVRDALQQN 253 (309)
T ss_dssp CGGGTHHHHHHHHTTS
T ss_pred ChHHhHHHHHHHHHhC
Confidence 2 23344444555443
No 236
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.31 E-value=3e-11 Score=101.61 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=80.8
Q ss_pred EeCCCcccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC
Q 047371 30 ILNPGLAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP 108 (222)
Q Consensus 30 ~~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 108 (222)
-+.|...|++........+..++... ..++++|||+|||+|.++..+++.+ .+|+|+|+++.+++.+++++.. .
T Consensus 21 ~~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~--~-- 95 (295)
T 3gru_A 21 MFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKEL--Y-- 95 (295)
T ss_dssp ---------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHH--C--
T ss_pred CCCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhcc--C--
Confidence 45566667664444444444555444 4578899999999999999999884 7999999999999999998762 2
Q ss_pred CceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHH
Q 047371 109 KKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVS 171 (222)
Q Consensus 109 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~ 171 (222)
.++++...|+..+.+ +..+||+|++|+|++....++..+.+
T Consensus 96 ~~v~vi~gD~l~~~~----------------------~~~~fD~Iv~NlPy~is~pil~~lL~ 136 (295)
T 3gru_A 96 NNIEIIWGDALKVDL----------------------NKLDFNKVVANLPYQISSPITFKLIK 136 (295)
T ss_dssp SSEEEEESCTTTSCG----------------------GGSCCSEEEEECCGGGHHHHHHHHHH
T ss_pred CCeEEEECchhhCCc----------------------ccCCccEEEEeCcccccHHHHHHHHh
Confidence 378899998876533 34569999999999876666555544
No 237
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.30 E-value=3e-12 Score=106.85 Aligned_cols=120 Identities=13% Similarity=0.074 Sum_probs=77.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh-cCCCCCceeEE--ecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL-NNIGPKKIKLH--LVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~ 132 (222)
++++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... .... .++.+. ..|...+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l----------- 144 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKM----------- 144 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGC-----------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhC-----------
Confidence 567899999999999999999887 6899999998 53332221100 0000 145666 5554433
Q ss_pred hhccccccccCCCCCCCeeEEEeccccc-------cH--HHHHHHHHHcccCCe--EEEEecCCCCcH--HHHHHHHHhh
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLN-------PL--PQLADHIVSYAKPGA--VVGISGILSEQL--PRIINRYSEF 199 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~-------~~--~~~l~~~~~~LkpgG--~l~~~~~~~~~~--~~~~~~~~~~ 199 (222)
+.++||+|+++.... .. ..+++.+.++||||| .+++..+..... .++.+.+...
T Consensus 145 -------------~~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~~ 211 (276)
T 2wa2_A 145 -------------EPFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQAR 211 (276)
T ss_dssp -------------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHHH
T ss_pred -------------CCCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHHHH
Confidence 567899999987611 01 136888999999999 888865553332 1444445544
Q ss_pred hhcc
Q 047371 200 LEDI 203 (222)
Q Consensus 200 ~~~~ 203 (222)
|...
T Consensus 212 f~~v 215 (276)
T 2wa2_A 212 FGGG 215 (276)
T ss_dssp HCCE
T ss_pred cCCE
Confidence 4433
No 238
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.30 E-value=2.5e-12 Score=112.77 Aligned_cols=99 Identities=13% Similarity=0.163 Sum_probs=73.9
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|+++ ++......+...+...+. .
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g-~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~---------~---- 167 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG-VRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR---------R---- 167 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT-CEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH---------H----
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC-CcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc---------c----
Confidence 467899999999999999999876 4999999999999999875 322000001111111111 1
Q ss_pred ccccccCCCCCCCeeEEEeccccccH---HHHHHHHHHcccCCeEEEEe
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPL---PQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~ 182 (222)
++++||+|+++.+++++ ..+++++.++|||||++++.
T Consensus 168 ---------~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 168 ---------TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp ---------HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 35789999999988774 56899999999999999985
No 239
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.29 E-value=4.3e-11 Score=104.30 Aligned_cols=103 Identities=23% Similarity=0.309 Sum_probs=80.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCC---------------------------------------CEEEEEeCChHHHHH
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGA---------------------------------------AMFVGVDIDPQVIKS 96 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~---------------------------------------~~v~gvD~s~~~l~~ 96 (222)
.+++..|||++||+|.+++.++.... .+|+|+|+++.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 35688999999999999998876421 469999999999999
Q ss_pred HHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHHHHHH
Q 047371 97 AHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHI 169 (222)
Q Consensus 97 a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~ 169 (222)
|+.|+..+++. +++++...|...+. ...+||+|++|||+.. +..+...+
T Consensus 273 Ar~Na~~~gl~-~~i~~~~~D~~~l~-----------------------~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~l 328 (385)
T 3ldu_A 273 ARENAEIAGVD-EYIEFNVGDATQFK-----------------------SEDEFGFIITNPPYGERLEDKDSVKQLYKEL 328 (385)
T ss_dssp HHHHHHHHTCG-GGEEEEECCGGGCC-----------------------CSCBSCEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-CceEEEECChhhcC-----------------------cCCCCcEEEECCCCcCccCCHHHHHHHHHHH
Confidence 99999998886 47888888876542 3458999999999853 33456666
Q ss_pred HHcccC--CeEEEEe
Q 047371 170 VSYAKP--GAVVGIS 182 (222)
Q Consensus 170 ~~~Lkp--gG~l~~~ 182 (222)
.+.||+ |+.+++.
T Consensus 329 g~~lk~~~g~~~~ii 343 (385)
T 3ldu_A 329 GYAFRKLKNWSYYLI 343 (385)
T ss_dssp HHHHHTSBSCEEEEE
T ss_pred HHHHhhCCCCEEEEE
Confidence 666666 7777764
No 240
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.29 E-value=2.6e-12 Score=106.62 Aligned_cols=119 Identities=12% Similarity=0.057 Sum_probs=78.2
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh-cCCCCCceeEE--ecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL-NNIGPKKIKLH--LVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~ 132 (222)
++++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++..... ... ..++.+. ..|...+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~-~~~v~~~~~~~D~~~l----------- 136 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESY-GWNIVKFKSRVDIHTL----------- 136 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBT-TGGGEEEECSCCTTTS-----------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhcc-CCCeEEEecccCHhHC-----------
Confidence 567899999999999999999887 6899999998 43222211000 000 0145666 5555443
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc--------H--HHHHHHHHHcccCCe--EEEEecCCCCcHH---HHHHHHH
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP--------L--PQLADHIVSYAKPGA--VVGISGILSEQLP---RIINRYS 197 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------~--~~~l~~~~~~LkpgG--~l~~~~~~~~~~~---~~~~~~~ 197 (222)
+.++||+|+++.. +. . ..+++.+.++||||| .+++..+. .... ++...+.
T Consensus 137 -------------~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~-~~~~~~~~~l~~l~ 201 (265)
T 2oxt_A 137 -------------PVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC-PYSVEVMERLSVMQ 201 (265)
T ss_dssp -------------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC-TTSHHHHHHHHHHH
T ss_pred -------------CCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC-CCChhHHHHHHHHH
Confidence 5678999999866 21 1 136888999999999 98886555 3333 4445555
Q ss_pred hhhhcce
Q 047371 198 EFLEDIL 204 (222)
Q Consensus 198 ~~~~~~~ 204 (222)
..|....
T Consensus 202 ~~f~~v~ 208 (265)
T 2oxt_A 202 RKWGGGL 208 (265)
T ss_dssp HHHCCEE
T ss_pred HHcCCEE
Confidence 5554433
No 241
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.28 E-value=4.4e-11 Score=104.46 Aligned_cols=104 Identities=29% Similarity=0.320 Sum_probs=80.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCC---------------------------------------CEEEEEeCChHHHHH
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGA---------------------------------------AMFVGVDIDPQVIKS 96 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~---------------------------------------~~v~gvD~s~~~l~~ 96 (222)
.+++..|||++||+|.+++.++.... .+|+|+|+++.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 45688999999999999998876421 359999999999999
Q ss_pred HHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHHHHHH
Q 047371 97 AHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHI 169 (222)
Q Consensus 97 a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~ 169 (222)
|+.|+..+++. .++++...|...+. ...+||+|++|||+.. +..+...+
T Consensus 279 Ar~Na~~~gl~-~~I~~~~~D~~~~~-----------------------~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~l 334 (393)
T 3k0b_A 279 AKQNAVEAGLG-DLITFRQLQVADFQ-----------------------TEDEYGVVVANPPYGERLEDEEAVRQLYREM 334 (393)
T ss_dssp HHHHHHHTTCT-TCSEEEECCGGGCC-----------------------CCCCSCEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-CceEEEECChHhCC-----------------------CCCCCCEEEECCCCccccCCchhHHHHHHHH
Confidence 99999999886 46888888876542 3458999999999853 33455555
Q ss_pred HHcccC--CeEEEEec
Q 047371 170 VSYAKP--GAVVGISG 183 (222)
Q Consensus 170 ~~~Lkp--gG~l~~~~ 183 (222)
.+.||+ ||.+++.+
T Consensus 335 g~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 335 GIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHTCTTCEEEEEE
T ss_pred HHHHhcCCCCEEEEEE
Confidence 556655 88877743
No 242
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.28 E-value=5e-11 Score=96.93 Aligned_cols=115 Identities=21% Similarity=0.111 Sum_probs=90.5
Q ss_pred CcchhHHHHHHHHhhh------cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEE
Q 047371 41 EHATTKLCLLLLQSLI------KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLH 114 (222)
Q Consensus 41 ~~~~~~~~~~~l~~~~------~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~ 114 (222)
.|.+++..+..++.+. .++.+|||+|||.|.++..+. +..+|+|+|+++.+++.++.++..++. +..+.
T Consensus 82 ~H~STrerLp~ld~fY~~i~~~~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~---~~~~~ 156 (253)
T 3frh_A 82 LHASTKERLAELDTLYDFIFSAETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW---DFTFA 156 (253)
T ss_dssp TSHHHHHHGGGHHHHHHHHTSSCCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC---EEEEE
T ss_pred hCCCHHHHhhhHHHHHHHHhcCCCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC---CceEE
Confidence 5667777766665552 467899999999999999877 678999999999999999999887774 56677
Q ss_pred ecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHH----HHHHHHHcccCCeEEEEec
Q 047371 115 LVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQ----LADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~----~l~~~~~~LkpgG~l~~~~ 183 (222)
..|..... +.+++|+++++-.++++.+ .+..+...|+++|.++...
T Consensus 157 v~D~~~~~-----------------------~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 157 LQDVLCAP-----------------------PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ECCTTTSC-----------------------CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred EeecccCC-----------------------CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 77664332 4668999999988887654 3447888999999888743
No 243
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.27 E-value=3.9e-11 Score=102.04 Aligned_cols=99 Identities=18% Similarity=0.086 Sum_probs=81.2
Q ss_pred CcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcccc
Q 047371 60 ELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSS 138 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (222)
.+|||+|||+|..+..+++. +..+++++|+ +.+++.|++++...++. .++++...|....
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~----------------- 229 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG-ERVSLVGGDMLQE----------------- 229 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT-TSEEEEESCTTTC-----------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC-CcEEEecCCCCCC-----------------
Confidence 89999999999999988875 5578999999 99999999988766654 4788888876431
Q ss_pred ccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecC
Q 047371 139 HEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 139 ~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..++||+|++...+++ ...+++++.+.|||||++++.+.
T Consensus 230 -------~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 230 -------VPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp -------CCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -------CCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2357999999888864 23689999999999999998644
No 244
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.27 E-value=1.1e-11 Score=108.40 Aligned_cols=127 Identities=20% Similarity=0.192 Sum_probs=90.7
Q ss_pred cCCcchhHHHHHHHHhhhc--CCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEE
Q 047371 39 TGEHATTKLCLLLLQSLIK--GGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLH 114 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~--~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~ 114 (222)
.|.+.++..+.+.+...+. ++.+|||+|||+|.++..+++. +..+++|+|+++.+++.| .++.+.
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~ 86 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGI 86 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEE
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEE
Confidence 4455666667666666543 4679999999999999998875 457999999999888766 256677
Q ss_pred ecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc--------------------------------H
Q 047371 115 LVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------------------------------L 162 (222)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------------------------~ 162 (222)
..|..... +.++||+|++|||+.. +
T Consensus 87 ~~D~~~~~-----------------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (421)
T 2ih2_A 87 LADFLLWE-----------------------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLY 143 (421)
T ss_dssp ESCGGGCC-----------------------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHH
T ss_pred eCChhhcC-----------------------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHH
Confidence 77654331 3568999999998732 1
Q ss_pred HHHHHHHHHcccCCeEEEEecCC----CCcHHHHHHHHHhh
Q 047371 163 PQLADHIVSYAKPGAVVGISGIL----SEQLPRIINRYSEF 199 (222)
Q Consensus 163 ~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~~~~~ 199 (222)
..+++.+.++|+|||.+++.... ......+.+.+.+.
T Consensus 144 ~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~ 184 (421)
T 2ih2_A 144 GAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLARE 184 (421)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhc
Confidence 14688999999999998885221 23456677666554
No 245
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=1e-10 Score=101.79 Aligned_cols=104 Identities=22% Similarity=0.213 Sum_probs=81.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCC---------------------------------------CEEEEEeCChHHHHH
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGA---------------------------------------AMFVGVDIDPQVIKS 96 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~---------------------------------------~~v~gvD~s~~~l~~ 96 (222)
.+++..++|.+||+|.+++.++.... .+++|+|+++.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 45788999999999999998875421 359999999999999
Q ss_pred HHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHHHHHH
Q 047371 97 AHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQLADHI 169 (222)
Q Consensus 97 a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~l~~~ 169 (222)
|++|+..+++. .++++...|...+. ...+||+|++|||+.. +..+...+
T Consensus 272 Ar~Na~~~gl~-~~I~~~~~D~~~l~-----------------------~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~l 327 (384)
T 3ldg_A 272 ARKNAREVGLE-DVVKLKQMRLQDFK-----------------------TNKINGVLISNPPYGERLLDDKAVDILYNEM 327 (384)
T ss_dssp HHHHHHHTTCT-TTEEEEECCGGGCC-----------------------CCCCSCEEEECCCCTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-CceEEEECChHHCC-----------------------ccCCcCEEEECCchhhccCCHHHHHHHHHHH
Confidence 99999999986 46889888876552 3357999999999852 34556666
Q ss_pred HHcccC--CeEEEEec
Q 047371 170 VSYAKP--GAVVGISG 183 (222)
Q Consensus 170 ~~~Lkp--gG~l~~~~ 183 (222)
.+.||+ ||.+++.+
T Consensus 328 g~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 328 GETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHTTCTTSEEEEEE
T ss_pred HHHHhhCCCcEEEEEE
Confidence 666666 88877753
No 246
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.26 E-value=2.1e-11 Score=111.29 Aligned_cols=104 Identities=18% Similarity=0.199 Sum_probs=82.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
...+.+|||+|||.|.++..+++.| .+|+|+|.++.+++.|+..+...+.. ++++...+++.+.. ..
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~g-a~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~~~~~~~~~-------~~--- 130 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKG-ATIVGIDFQQENINVCRALAEENPDF--AAEFRVGRIEEVIA-------AL--- 130 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEECCHHHHHH-------HC---
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCC-CEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEECCHHHHhh-------hc---
Confidence 4567899999999999999999997 58999999999999999998877643 68888887765421 01
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHH-----HHHHHHHcccCCeEEEEe
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQ-----LADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~-----~l~~~~~~LkpgG~l~~~ 182 (222)
..++||+|+|..+++|..+ .+..+.+.|.++|..++.
T Consensus 131 ----------~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 131 ----------EEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp ----------CTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred ----------cCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 4678999999999998654 245566777888776664
No 247
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.25 E-value=2.4e-11 Score=102.70 Aligned_cols=117 Identities=10% Similarity=0.065 Sum_probs=77.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeC----ChHHHHHHHHHHHhcCCCCCceeEEec-CCcccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDI----DPQVIKSAHQNAALNNIGPKKIKLHLV-PDRTFTASMNERVD 130 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ 130 (222)
++++.+|||+|||+|.++..+++. ++|+|+|+ ++.+++.+ ........++.+... |...+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~D~~~l--------- 144 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI----PMSTYGWNLVRLQSGVDVFFI--------- 144 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC----CCCSTTGGGEEEECSCCTTTS---------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH----HhhhcCCCCeEEEeccccccC---------
Confidence 567899999999999999999887 57999999 55433211 011111125666665 44332
Q ss_pred cchhccccccccCCCCCCCeeEEEeccccc---c----H--HHHHHHHHHcccCCeEEEEecCCCC--cHHHHHHHHHhh
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILLN---P----L--PQLADHIVSYAKPGAVVGISGILSE--QLPRIINRYSEF 199 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~---~----~--~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~ 199 (222)
+.++||+|+|+.+.+ + . ...+..+.++|||||.+++..+... ...++...+...
T Consensus 145 ---------------~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~ 209 (305)
T 2p41_A 145 ---------------PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRK 209 (305)
T ss_dssp ---------------CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHH
T ss_pred ---------------CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHH
Confidence 456899999987642 1 1 1467888999999999988655442 334555555555
Q ss_pred hhc
Q 047371 200 LED 202 (222)
Q Consensus 200 ~~~ 202 (222)
|..
T Consensus 210 f~~ 212 (305)
T 2p41_A 210 HGG 212 (305)
T ss_dssp HCC
T ss_pred cCC
Confidence 543
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.23 E-value=1.7e-10 Score=94.32 Aligned_cols=120 Identities=11% Similarity=0.177 Sum_probs=78.9
Q ss_pred CCcccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCce
Q 047371 33 PGLAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKI 111 (222)
Q Consensus 33 ~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v 111 (222)
+...|++...........++... ..++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++.... .++
T Consensus 4 ~~k~~gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~v 78 (244)
T 1qam_A 4 KNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH----DNF 78 (244)
T ss_dssp ------CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC----CSE
T ss_pred CCccCCccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC----CCe
Confidence 33455553333333333443333 3568899999999999999999886 79999999999999999887532 378
Q ss_pred eEEecCCcccccccccccccchhccccccccCCCC-CCCeeEEEeccccccHHHHHHHHHHcccCCeEEE
Q 047371 112 KLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISE-TEEYDVVIANILLNPLPQLADHIVSYAKPGAVVG 180 (222)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~ 180 (222)
++...|...+.. + ...| .|++|+|++....++..+......++.++
T Consensus 79 ~~~~~D~~~~~~----------------------~~~~~~-~vv~nlPy~~~~~~l~~~l~~~~~~~~~l 125 (244)
T 1qam_A 79 QVLNKDILQFKF----------------------PKNQSY-KIFGNIPYNISTDIIRKIVFDSIADEIYL 125 (244)
T ss_dssp EEECCCGGGCCC----------------------CSSCCC-EEEEECCGGGHHHHHHHHHHSCCCSEEEE
T ss_pred EEEEChHHhCCc----------------------ccCCCe-EEEEeCCcccCHHHHHHHHhcCCCCeEEE
Confidence 888888765532 2 2345 68899999876666666655443443333
No 249
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.23 E-value=3.6e-11 Score=104.60 Aligned_cols=115 Identities=16% Similarity=0.138 Sum_probs=80.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEccC------CCHHHHHHHH-h-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEE
Q 047371 43 ATTKLCLLLLQSLIKGGELFLDYGTG------SGILGIAAIK-F-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLH 114 (222)
Q Consensus 43 ~~~~~~~~~l~~~~~~~~~vLD~G~G------~G~~~~~la~-~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~ 114 (222)
........++..+..++.+|||+||| +|..++.+++ + +..+|+|+|+++.+. . . ..++++.
T Consensus 201 ~y~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-~--~~rI~fv 269 (419)
T 3sso_A 201 WFTPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-D--ELRIRTI 269 (419)
T ss_dssp BCHHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-C--BTTEEEE
T ss_pred hHHHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-c--CCCcEEE
Confidence 34555666666666678999999999 6665665554 3 668999999999862 1 1 2478999
Q ss_pred ecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc--HHHHHHHHHHcccCCeEEEEecC
Q 047371 115 LVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.+|...+.+ ...+. ...++||+|+++...+. ....++++.++|||||++++.++
T Consensus 270 ~GDa~dlpf-----~~~l~-----------~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 270 QGDQNDAEF-----LDRIA-----------RRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp ECCTTCHHH-----HHHHH-----------HHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred Eecccccch-----hhhhh-----------cccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 998876532 00000 01478999999864322 45679999999999999999644
No 250
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=1e-10 Score=96.43 Aligned_cols=113 Identities=17% Similarity=0.185 Sum_probs=78.5
Q ss_pred cccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeE
Q 047371 35 LAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKL 113 (222)
Q Consensus 35 ~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~ 113 (222)
..||+........+..++... ..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.+++++.. . .++++
T Consensus 5 k~~GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~--~--~~v~~ 79 (255)
T 3tqs_A 5 KRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ--Q--KNITI 79 (255)
T ss_dssp ----CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT--C--TTEEE
T ss_pred CcCCcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh--C--CCcEE
Confidence 344443333334444444443 4578899999999999999999876 7999999999999999998754 1 37889
Q ss_pred EecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHH
Q 047371 114 HLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVS 171 (222)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~ 171 (222)
..+|+..+... .+...++|| |++|+|++....++.++..
T Consensus 80 i~~D~~~~~~~------------------~~~~~~~~~-vv~NlPY~is~~il~~ll~ 118 (255)
T 3tqs_A 80 YQNDALQFDFS------------------SVKTDKPLR-VVGNLPYNISTPLLFHLFS 118 (255)
T ss_dssp EESCTTTCCGG------------------GSCCSSCEE-EEEECCHHHHHHHHHHHHH
T ss_pred EEcchHhCCHH------------------HhccCCCeE-EEecCCcccCHHHHHHHHh
Confidence 99988765320 011235688 8999999876666655554
No 251
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.21 E-value=3.7e-11 Score=108.98 Aligned_cols=140 Identities=17% Similarity=0.181 Sum_probs=98.6
Q ss_pred cCCcchhHHHHHHHHhhhc--CCCcEEEEccCCCHHHHHHHHh----C---------------CCEEEEEeCChHHHHHH
Q 047371 39 TGEHATTKLCLLLLQSLIK--GGELFLDYGTGSGILGIAAIKF----G---------------AAMFVGVDIDPQVIKSA 97 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~--~~~~vLD~G~G~G~~~~~la~~----~---------------~~~v~gvD~s~~~l~~a 97 (222)
.|.+.|++.+..++.+.+. ++.+|+|.|||+|.++..+++. . ..+++|+|+++.++..|
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 4667777777777766643 4679999999999998877653 1 13799999999999999
Q ss_pred HHHHHhcCCCCC---ceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccH------------
Q 047371 98 HQNAALNNIGPK---KIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL------------ 162 (222)
Q Consensus 98 ~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~------------ 162 (222)
+.++..+++... +..+...|...... ....+||+|++|||+...
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~---------------------~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~ 286 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDG---------------------ENLPKAHIVATNPPFGSAAGTNITRTFVHP 286 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHH---------------------HTSCCEEEEEECCCCTTCSSCCCCSCCSSC
T ss_pred HHHHHHhCCCccccccCCeEeCCCccccc---------------------ccccCCeEEEECCCcccccchhhHhhcCCC
Confidence 999988776520 15566666532210 035679999999998642
Q ss_pred -----HHHHHHHHHcccCCeEEEEecC-----CCCcHHHHHHHHHhh
Q 047371 163 -----PQLADHIVSYAKPGAVVGISGI-----LSEQLPRIINRYSEF 199 (222)
Q Consensus 163 -----~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~~~~~~ 199 (222)
..+++++.+.|||||++.+... .......+++.+.+.
T Consensus 287 ~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~ 333 (541)
T 2ar0_A 287 TSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDK 333 (541)
T ss_dssp CSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhc
Confidence 2579999999999999887422 122345666666554
No 252
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.21 E-value=1.5e-10 Score=99.31 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=74.4
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+ +.++. +++....+.. .++++...|.... +
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~-~~v~~~~~d~~~~----------~-- 245 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVA-GRWKVVEGDFLRE----------V-- 245 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGT-TSEEEEECCTTTC----------C--
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCC-CCeEEEecCCCCC----------C--
Confidence 346789999999999999988875 5678999999 44544 3333333433 4788888876311 0
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+ +||+|++...+++. ..+++++++.|||||.+++.+.
T Consensus 246 -----------p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 246 -----------P--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp -----------C--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred -----------C--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 4 89999998888753 4689999999999999998543
No 253
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.18 E-value=1.1e-10 Score=105.79 Aligned_cols=142 Identities=20% Similarity=0.164 Sum_probs=103.0
Q ss_pred cCCcchhHHHHHHHHhhhc------CCCcEEEEccCCCHHHHHHHHh----CCCEEEEEeCChHHHHHHHHHHHhcCCCC
Q 047371 39 TGEHATTKLCLLLLQSLIK------GGELFLDYGTGSGILGIAAIKF----GAAMFVGVDIDPQVIKSAHQNAALNNIGP 108 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~------~~~~vLD~G~G~G~~~~~la~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 108 (222)
.|.+.|++.+.+++...+. ++.+|+|.+||+|.+...+++. +..+++|+|+++.++..|+.++..+++..
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 4667777777777766644 5679999999999988877764 35789999999999999999998888854
Q ss_pred CceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc----------------H----------
Q 047371 109 KKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP----------------L---------- 162 (222)
Q Consensus 109 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------~---------- 162 (222)
.++.+..+|.....+ +.....+||+|++|||+.. +
T Consensus 276 ~~~~I~~gDtL~~d~-------------------p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~ 336 (542)
T 3lkd_A 276 ENQFLHNADTLDEDW-------------------PTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD 336 (542)
T ss_dssp GGEEEEESCTTTSCS-------------------CCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH
T ss_pred CccceEecceecccc-------------------cccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh
Confidence 467777776543210 0014578999999999732 0
Q ss_pred HHHHHHHHHccc-CCeEEEEecC---C--CCcHHHHHHHHHhh
Q 047371 163 PQLADHIVSYAK-PGAVVGISGI---L--SEQLPRIINRYSEF 199 (222)
Q Consensus 163 ~~~l~~~~~~Lk-pgG~l~~~~~---~--~~~~~~~~~~~~~~ 199 (222)
-.+++++.+.|| +||++.+... . ......+++.+.+.
T Consensus 337 ~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~ 379 (542)
T 3lkd_A 337 FAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEE 379 (542)
T ss_dssp HHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhC
Confidence 126899999999 9999876422 1 22345677776654
No 254
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.17 E-value=1.2e-09 Score=93.89 Aligned_cols=101 Identities=22% Similarity=0.246 Sum_probs=79.0
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+..+|+|+|||+|.++..+++. +..+++..|. |.+++.|+++....+. +++++...|.-..
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~--~rv~~~~gD~~~~-------------- 240 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEE--EQIDFQEGDFFKD-------------- 240 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--C--CSEEEEESCTTTS--------------
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhccc--CceeeecCccccC--------------
Confidence 45679999999999999988864 6678888887 8899999988765442 5899988876322
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+...+|++++...+|+. ..+++++++.|+|||.+++.+.
T Consensus 241 ----------~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 241 ----------PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp ----------CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ----------CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 34458999998888752 3579999999999999988543
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.17 E-value=1.9e-10 Score=95.67 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=83.3
Q ss_pred eCCCcccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCC
Q 047371 31 LNPGLAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPK 109 (222)
Q Consensus 31 ~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~ 109 (222)
+.+...||+..-.....+..++... ..++ +|||+|||+|.++..+++.+ .+|+|+|+++.+++.+++++.. .
T Consensus 19 ~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~-----~ 91 (271)
T 3fut_A 19 LFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG-----L 91 (271)
T ss_dssp CCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT-----S
T ss_pred CCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC-----C
Confidence 3445566554444444445555444 5567 99999999999999999886 6899999999999999988652 3
Q ss_pred ceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHc
Q 047371 110 KIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSY 172 (222)
Q Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~ 172 (222)
++++..+|...+.. .....+|.|++|+|++....++.++...
T Consensus 92 ~v~vi~~D~l~~~~---------------------~~~~~~~~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 92 PVRLVFQDALLYPW---------------------EEVPQGSLLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp SEEEEESCGGGSCG---------------------GGSCTTEEEEEEECSSCCHHHHHHHHHH
T ss_pred CEEEEECChhhCCh---------------------hhccCccEEEecCcccccHHHHHHHhcC
Confidence 78899988866532 0112589999999999876666655554
No 256
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.17 E-value=1.8e-12 Score=106.05 Aligned_cols=98 Identities=15% Similarity=0.247 Sum_probs=74.7
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++.. . ..++++...|...+..
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~--~--~~~v~~~~~D~~~~~~------------ 89 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK--L--NTRVTLIHQDILQFQF------------ 89 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT--T--CSEEEECCSCCTTTTC------------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc--c--CCceEEEECChhhcCc------------
Confidence 4568899999999999999999886 799999999999999887764 2 1478888888765532
Q ss_pred cccccccCCCC-CCCeeEEEeccccccHHHH----H--------------HHHHHcccCCeEEEE
Q 047371 136 LSSHEIRGISE-TEEYDVVIANILLNPLPQL----A--------------DHIVSYAKPGAVVGI 181 (222)
Q Consensus 136 ~~~~~~~~~~~-~~~~D~v~~~~~~~~~~~~----l--------------~~~~~~LkpgG~l~~ 181 (222)
+ .++| .|++|+|++....+ + +.+.++|+|||.+++
T Consensus 90 ----------~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 90 ----------PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp ----------CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred ----------ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 2 3578 88999998753222 2 557777888877665
No 257
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.15 E-value=2.4e-10 Score=94.88 Aligned_cols=113 Identities=16% Similarity=0.100 Sum_probs=76.5
Q ss_pred CcEEEEccCC---CHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc-ccccchh
Q 047371 60 ELFLDYGTGS---GILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE-RVDGVVE 134 (222)
Q Consensus 60 ~~vLD~G~G~---G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~ 134 (222)
.+|||+|||. |.....+.+ .+..+|+++|.|+.|++.|++++...+. .++.+...|......-+.. .....
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~--~~~~~v~aD~~~~~~~l~~~~~~~~-- 155 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE--GRTAYVEADMLDPASILDAPELRDT-- 155 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS--SEEEEEECCTTCHHHHHTCHHHHTT--
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC--CcEEEEEecccChhhhhcccccccc--
Confidence 6899999997 344433333 3668999999999999999988754332 3788999888654210000 00000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHH------HHHHHHHHcccCCeEEEEecCCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLP------QLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~------~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
+-.++++ .|++|..+|++. .++..+.+.|+|||+++++....
T Consensus 156 ---------~D~~~p~-av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 156 ---------LDLTRPV-ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp ---------CCTTSCC-EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred ---------cCcCCcc-hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 0012333 577888888743 48999999999999999986554
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.15 E-value=2.5e-10 Score=98.12 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=78.7
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcC---CCC---CceeEEecCCcccccccccccc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNN---IGP---KKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~~---~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
+++++||++|||+|.++..+++.+..+|+++|+++.+++.|++++...+ +.. .++++...|+..+...
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~------ 260 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR------ 260 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH------
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHh------
Confidence 3578999999999999999988877899999999999999999875321 221 2688888877554210
Q ss_pred cchhccccccccCCCCCCCeeEEEecccc---c------cHHHHHHHH----HHcccCCeEEEEe
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILL---N------PLPQLADHI----VSYAKPGAVVGIS 182 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~---~------~~~~~l~~~----~~~LkpgG~l~~~ 182 (222)
. ....++||+|+++++- . ...++++.+ .++|+|||.+++.
T Consensus 261 -~-----------~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 261 -Y-----------AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp -H-----------HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -h-----------hccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 0 0024679999998743 1 123455555 9999999999984
No 259
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.11 E-value=2.5e-10 Score=95.76 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=79.5
Q ss_pred hcCCCcEEEEccCC------CHHHHHHHH-hC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeE-EecCCcccccccc
Q 047371 56 IKGGELFLDYGTGS------GILGIAAIK-FG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKL-HLVPDRTFTASMN 126 (222)
Q Consensus 56 ~~~~~~vLD~G~G~------G~~~~~la~-~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~ 126 (222)
++++.+|||+|||+ |. ..+++ .+ ..+|+|+|+++. +. ++++ ...|...+.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~--~v~~~i~gD~~~~~---- 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VS--DADSTLIGDCATVH---- 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BC--SSSEEEESCGGGCC----
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CC--CCEEEEECccccCC----
Confidence 57789999999955 66 33444 34 479999999997 11 5667 777765432
Q ss_pred cccccchhccccccccCCCCCCCeeEEEeccccc--------------cHHHHHHHHHHcccCCeEEEEecCCCCcHHHH
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLN--------------PLPQLADHIVSYAKPGAVVGISGILSEQLPRI 192 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 192 (222)
..++||+|++|+..+ .+..+++.+.+.|||||.+++..+......++
T Consensus 120 -------------------~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l 180 (290)
T 2xyq_A 120 -------------------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADL 180 (290)
T ss_dssp -------------------CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHH
T ss_pred -------------------ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHH
Confidence 236799999986422 13478999999999999999976666666688
Q ss_pred HHHHHhh-hhccee
Q 047371 193 INRYSEF-LEDILV 205 (222)
Q Consensus 193 ~~~~~~~-~~~~~~ 205 (222)
.+.++.. |..+..
T Consensus 181 ~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 181 YKLMGHFSWWTAFV 194 (290)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHHHcCCcEEEE
Confidence 8888776 655444
No 260
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.09 E-value=6.4e-10 Score=91.32 Aligned_cols=115 Identities=14% Similarity=0.220 Sum_probs=80.4
Q ss_pred CCCcccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCc
Q 047371 32 NPGLAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKK 110 (222)
Q Consensus 32 ~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~ 110 (222)
.+...||+........+..++... ..++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++ . ..+
T Consensus 4 ~~~k~~GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~-----~~~ 77 (249)
T 3ftd_A 4 RLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G-----DER 77 (249)
T ss_dssp ----CCCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C-----CTT
T ss_pred CCCCcccccccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c-----CCC
Confidence 445566664444444455555444 456889999999999999999988668999999999999999876 1 137
Q ss_pred eeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcc
Q 047371 111 IKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYA 173 (222)
Q Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~L 173 (222)
+++...|+..+... + ....+ .|++|+|++....++.++.+..
T Consensus 78 v~~i~~D~~~~~~~------------------~--~~~~~-~vv~NlPy~i~~~il~~ll~~~ 119 (249)
T 3ftd_A 78 LEVINEDASKFPFC------------------S--LGKEL-KVVGNLPYNVASLIIENTVYNK 119 (249)
T ss_dssp EEEECSCTTTCCGG------------------G--SCSSE-EEEEECCTTTHHHHHHHHHHTG
T ss_pred eEEEEcchhhCChh------------------H--ccCCc-EEEEECchhccHHHHHHHHhcC
Confidence 88998888765320 0 01134 8999999988777776666543
No 261
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.08 E-value=3.3e-10 Score=102.80 Aligned_cols=139 Identities=18% Similarity=0.104 Sum_probs=99.3
Q ss_pred cCCcchhHHHHHHHHhhhcCC-CcEEEEccCCCHHHHHHHHh--------C--------CCEEEEEeCChHHHHHHHHHH
Q 047371 39 TGEHATTKLCLLLLQSLIKGG-ELFLDYGTGSGILGIAAIKF--------G--------AAMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~~~-~~vLD~G~G~G~~~~~la~~--------~--------~~~v~gvD~s~~~l~~a~~~~ 101 (222)
.|.+.|++.+.+++...+.+. .+|+|.+||+|.+.+.+++. . ..+++|+|+++.++..|+.++
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl 303 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNM 303 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHH
Confidence 467778888888887775442 39999999999988876532 1 358999999999999999999
Q ss_pred HhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccH-------------------
Q 047371 102 ALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL------------------- 162 (222)
Q Consensus 102 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~------------------- 162 (222)
..+++.. ++.+..+|.... +.....+||+|++|||+...
T Consensus 304 ~l~gi~~-~i~i~~gDtL~~---------------------~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~ 361 (544)
T 3khk_A 304 VIRGIDF-NFGKKNADSFLD---------------------DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNG 361 (544)
T ss_dssp HHTTCCC-BCCSSSCCTTTS---------------------CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC-
T ss_pred HHhCCCc-ccceeccchhcC---------------------cccccccccEEEECCCcCCccccchhhhhhhhhhcCccc
Confidence 8888752 343344443211 11145689999999998631
Q ss_pred -------------HHHHHHHHHcccCCeEEEEec---CC-C--CcHHHHHHHHHhh
Q 047371 163 -------------PQLADHIVSYAKPGAVVGISG---IL-S--EQLPRIINRYSEF 199 (222)
Q Consensus 163 -------------~~~l~~~~~~LkpgG~l~~~~---~~-~--~~~~~~~~~~~~~ 199 (222)
-.+++++.+.|||||++.+.. +. . .....+++.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~ 417 (544)
T 3khk_A 362 EKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQ 417 (544)
T ss_dssp -CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHT
T ss_pred ccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhC
Confidence 147899999999999977642 11 1 2456777776654
No 262
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.06 E-value=2.2e-09 Score=92.53 Aligned_cols=122 Identities=17% Similarity=0.200 Sum_probs=89.0
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCC----CceeEEecCCcccccccccccc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGP----KKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
.++|++|||++||.|.-+..++... ...|+++|+++..++..++++.+.+... .++.+...|+..+..
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~------- 218 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE------- 218 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH-------
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch-------
Confidence 5689999999999999999888763 3579999999999999999998776531 256666666544311
Q ss_pred cchhccccccccCCCCCCCeeEEEecccccc---------------------------HHHHHHHHHHcccCCeEEEEec
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILLNP---------------------------LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------------------------~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
. ..+.||.|+++.|+.. ..+++..+.++|||||+++.++
T Consensus 219 -~-------------~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 219 -L-------------EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp -H-------------STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -h-------------ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 1 4568999999888642 1347899999999999988853
Q ss_pred C--C-CCcHHHHHHHHHh
Q 047371 184 I--L-SEQLPRIINRYSE 198 (222)
Q Consensus 184 ~--~-~~~~~~~~~~~~~ 198 (222)
. . .++...+...++.
T Consensus 285 CSl~~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 285 CSLSHLQNEYVVQGAIEL 302 (359)
T ss_dssp SCCCTTTTHHHHHHHHHH
T ss_pred CCCchhhCHHHHHHHHHh
Confidence 3 2 3444444444443
No 263
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.03 E-value=9.4e-09 Score=86.04 Aligned_cols=172 Identities=13% Similarity=0.127 Sum_probs=114.4
Q ss_pred eeEEeCCCcccccCC-cchhHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHh-
Q 047371 27 TNIILNPGLAFGTGE-HATTKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAAL- 103 (222)
Q Consensus 27 ~~~~~~~~~~f~~~~-~~~~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~- 103 (222)
+.+.+|....+.... +.+..++...-....+..++||-+|.|.|..+..+++. +..+++.+|+++.+++.+++.+..
T Consensus 51 ~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~ 130 (294)
T 3o4f_A 51 RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNH 130 (294)
T ss_dssp EEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHH
T ss_pred eEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccc
Confidence 445555554443222 22333333322223456789999999999999999886 457899999999999999998743
Q ss_pred --cCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc-------cHHHHHHHHHHccc
Q 047371 104 --NNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN-------PLPQLADHIVSYAK 174 (222)
Q Consensus 104 --~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-------~~~~~l~~~~~~Lk 174 (222)
..++..++++...|+..+.. ...++||+|+.+..-. ...++++.+.+.|+
T Consensus 131 ~~~~~~dpRv~v~~~Dg~~~l~---------------------~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~ 189 (294)
T 3o4f_A 131 NAGSYDDPRFKLVIDDGVNFVN---------------------QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN 189 (294)
T ss_dssp HTTGGGCTTEEEEESCTTTTTS---------------------CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEE
T ss_pred cccccCCCcEEEEechHHHHHh---------------------hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhC
Confidence 12334689999998866531 1456899999865311 13578999999999
Q ss_pred CCeEEEEe-cCC---CCcHHHHHHHHHhhhhcc-------eecccCCceEeecccC
Q 047371 175 PGAVVGIS-GIL---SEQLPRIINRYSEFLEDI-------LVSEKDDWRCVSGTKF 219 (222)
Q Consensus 175 pgG~l~~~-~~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~w~~~~~~k~ 219 (222)
|||+++.. +.+ ......+.+.+.+.|... +....|.|.-..+.|.
T Consensus 190 p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 190 PGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp EEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEESC
T ss_pred CCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEECC
Confidence 99999973 222 233445555566555443 3344688877777654
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.03 E-value=5.2e-09 Score=83.13 Aligned_cols=130 Identities=13% Similarity=0.047 Sum_probs=84.6
Q ss_pred HHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCC--CCCceeEEecCCccc-cccc
Q 047371 49 LLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNI--GPKKIKLHLVPDRTF-TASM 125 (222)
Q Consensus 49 ~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~v~~~~~~~~~~-~~~~ 125 (222)
.++|+..+.+.++|||+|| |+.++.+++...++|+.+|.++...+.|++++...++ . +++++..+++... .+.-
T Consensus 21 ~~~L~~~l~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-~~I~~~~gda~~~~~wg~ 97 (202)
T 3cvo_A 21 AEALRMAYEEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG-TEVNIVWTDIGPTGDWGH 97 (202)
T ss_dssp HHHHHHHHHHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT-CEEEEEECCCSSBCGGGC
T ss_pred HHHHHHHhhCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-CceEEEEeCchhhhcccc
Confidence 3344335567889999998 5788888875458999999999999999999999887 4 5899998886432 0100
Q ss_pred ccccccchhccc-cccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 126 NERVDGVVEYLS-SHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 126 ~~~~~~~~~~~~-~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+........... ...+.+....++||+|+++.... ...+..+.++|+|||++++..
T Consensus 98 p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 98 PVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp BSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETT
T ss_pred cccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeC
Confidence 000000000000 00000011246899999987543 355666779999999998854
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.02 E-value=1.8e-09 Score=90.09 Aligned_cols=120 Identities=21% Similarity=0.208 Sum_probs=79.3
Q ss_pred eCCCcccccCCcchhHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCC---CEEEEEeCChHHHHHHHHHHHhcCC
Q 047371 31 LNPGLAFGTGEHATTKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGA---AMFVGVDIDPQVIKSAHQNAALNNI 106 (222)
Q Consensus 31 ~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~ 106 (222)
+.+...|++........+..++... ..++.+|||+|||+|.++..+++... .+|+|+|+++.+++.++++. .
T Consensus 14 ~~~~k~~GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~ 89 (279)
T 3uzu_A 14 HFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----G 89 (279)
T ss_dssp ----CCCSCCEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----G
T ss_pred CCccccCCccccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----C
Confidence 4455566654443444444444444 46788999999999999999988642 23999999999999999883 1
Q ss_pred CCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHc
Q 047371 107 GPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSY 172 (222)
Q Consensus 107 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~ 172 (222)
.++++...|+..+.+. .+ ... .......|++|+|++....++.++...
T Consensus 90 --~~v~~i~~D~~~~~~~------~~---------~~~-~~~~~~~vv~NlPY~iss~il~~ll~~ 137 (279)
T 3uzu_A 90 --ELLELHAGDALTFDFG------SI---------ARP-GDEPSLRIIGNLPYNISSPLLFHLMSF 137 (279)
T ss_dssp --GGEEEEESCGGGCCGG------GG---------SCS-SSSCCEEEEEECCHHHHHHHHHHHGGG
T ss_pred --CCcEEEECChhcCChh------Hh---------ccc-ccCCceEEEEccCccccHHHHHHHHhc
Confidence 3788999988765420 00 000 011346899999998777776666543
No 266
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=1.3e-09 Score=94.26 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=73.0
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|+.. .++++...|.... .
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~~-~------------ 259 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDMFDG-V------------ 259 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTTC-C------------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCCCCC-C------------
Confidence 34679999999999999988874 6678999999 8887766532 3788888776431 1
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.. |+|++...+|+. ..+++++++.|||||.+++.+.
T Consensus 260 ----------p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 260 ----------PKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp ----------CCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ----------CCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 333 999998888742 3579999999999999998644
No 267
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.01 E-value=2.8e-09 Score=99.50 Aligned_cols=141 Identities=12% Similarity=0.053 Sum_probs=90.1
Q ss_pred cCCcchhHHHHHHHHhh----hc----CCCcEEEEccCCCHHHHHHHHh-C---CCEEEEEeCChHHHHHH--HHHHHhc
Q 047371 39 TGEHATTKLCLLLLQSL----IK----GGELFLDYGTGSGILGIAAIKF-G---AAMFVGVDIDPQVIKSA--HQNAALN 104 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~----~~----~~~~vLD~G~G~G~~~~~la~~-~---~~~v~gvD~s~~~l~~a--~~~~~~~ 104 (222)
.|.+.++..+..++... .+ ++.+|||.|||+|.++..+++. + ..+++|+|+++.+++.| +.++..+
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 45566666666655444 22 4779999999999999988864 2 35799999999999999 5554432
Q ss_pred CCCC--CceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc---------------------
Q 047371 105 NIGP--KKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------------------- 161 (222)
Q Consensus 105 ~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------------- 161 (222)
.+.. ....+...+..... ....++||+|++|||+..
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~---------------------~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~ 432 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLN---------------------PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGN 432 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCC---------------------GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSS
T ss_pred hhhcCCCcceEEecchhccc---------------------ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccc
Confidence 2221 11122222211100 013567999999999832
Q ss_pred -----------HHHHHHHHHHcccCCeEEEEec---CCC---CcHHHHHHHHHhhh
Q 047371 162 -----------LPQLADHIVSYAKPGAVVGISG---ILS---EQLPRIINRYSEFL 200 (222)
Q Consensus 162 -----------~~~~l~~~~~~LkpgG~l~~~~---~~~---~~~~~~~~~~~~~~ 200 (222)
...+++.+.++|++||++.+.. +.. .....+++.+.+.+
T Consensus 433 ~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~ 488 (878)
T 3s1s_A 433 RPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNF 488 (878)
T ss_dssp CCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTT
T ss_pred cccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCC
Confidence 1236788999999999988742 221 13566777766553
No 268
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.01 E-value=1.2e-09 Score=94.29 Aligned_cols=93 Identities=20% Similarity=0.099 Sum_probs=73.3
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++. .++++...|.... .
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~~-~------------ 265 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL--------SGIEHVGGDMFAS-V------------ 265 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTTC-C------------
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc--------CCCEEEeCCcccC-C------------
Confidence 45789999999999999998875 4568999999 8888776541 2577877766331 1
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEec
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+. ||+|+++..+++. ..+++++++.|||||.+++.+
T Consensus 266 ----------~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 266 ----------PQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp ----------CC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------CC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 32 9999999888763 268999999999999999863
No 269
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.00 E-value=2.6e-09 Score=92.25 Aligned_cols=94 Identities=18% Similarity=0.131 Sum_probs=73.6
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
++..+|||+|||+|..+..+++. +..+++++|+ +.+++.|++. .++++...|... ..
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~D~~~-~~------------ 257 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF--------PGVTHVGGDMFK-EV------------ 257 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CC------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc--------CCeEEEeCCcCC-CC------------
Confidence 35689999999999999988864 6678999999 8887766532 378888887643 11
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.+ |+|++...+|+. ..+++++++.|||||++++.+.
T Consensus 258 ----------p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 258 ----------PSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp ----------CCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ----------CCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 333 999998888753 3579999999999999998654
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.00 E-value=3.8e-09 Score=98.58 Aligned_cols=105 Identities=29% Similarity=0.335 Sum_probs=78.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhC-------------------------------------------CCEEEEEeCChH
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFG-------------------------------------------AAMFVGVDIDPQ 92 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~-------------------------------------------~~~v~gvD~s~~ 92 (222)
.+++..++|.+||+|.+++.++... ..+++|+|+++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 3567899999999999999877531 147999999999
Q ss_pred HHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------HHHH
Q 047371 93 VIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------LPQL 165 (222)
Q Consensus 93 ~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~~~~ 165 (222)
+++.|+.|+..+++. +.+.+...|...+.. + ...++||+|++|||+.. +..+
T Consensus 268 av~~A~~N~~~agv~-~~i~~~~~D~~~~~~-------~-------------~~~~~~d~Iv~NPPYG~Rlg~~~~l~~l 326 (703)
T 3v97_A 268 VIQRARTNARLAGIG-ELITFEVKDVAQLTN-------P-------------LPKGPYGTVLSNPPYGERLDSEPALIAL 326 (703)
T ss_dssp HHHHHHHHHHHTTCG-GGEEEEECCGGGCCC-------S-------------CTTCCCCEEEECCCCCC---CCHHHHHH
T ss_pred HHHHHHHHHHHcCCC-CceEEEECChhhCcc-------c-------------cccCCCCEEEeCCCccccccchhHHHHH
Confidence 999999999999986 468888888755421 0 01237999999999853 2333
Q ss_pred H---HHHHHcccCCeEEEE
Q 047371 166 A---DHIVSYAKPGAVVGI 181 (222)
Q Consensus 166 l---~~~~~~LkpgG~l~~ 181 (222)
. ..+.+.+.|||.+++
T Consensus 327 y~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 327 HSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhhCCCCeEEE
Confidence 3 344445568999887
No 271
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.95 E-value=1e-09 Score=96.04 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=68.1
Q ss_pred hhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc--CCCCCceeEEecCCccccccccccccc
Q 047371 54 SLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN--NIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 54 ~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
..+++|.+|||+|||+|..++.+++.+ .+|+++|+++.+++.|+.|+..+ ++. ++++...|...+.. .
T Consensus 89 ~~l~~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~--~i~~i~~Da~~~L~-------~ 158 (410)
T 3ll7_A 89 RFIREGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGK--DVNILTGDFKEYLP-------L 158 (410)
T ss_dssp GGSCTTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTC--EEEEEESCGGGSHH-------H
T ss_pred HhcCCCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCC--cEEEEECcHHHhhh-------h
Confidence 345568999999999999999998875 69999999999999999999887 763 89999988755310 0
Q ss_pred chhccccccccCCCCCCCeeEEEecccccc
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
. +.++||+|+++||+..
T Consensus 159 ~-------------~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 159 I-------------KTFHPDYIYVDPARRS 175 (410)
T ss_dssp H-------------HHHCCSEEEECCEEC-
T ss_pred c-------------cCCCceEEEECCCCcC
Confidence 0 1347999999999754
No 272
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.95 E-value=2.3e-09 Score=91.93 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=74.3
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++. .++++...|.... .
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~~-~----------- 244 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS--------NNLTYVGGDMFTS-I----------- 244 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB--------TTEEEEECCTTTC-C-----------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC--------CCcEEEeccccCC-C-----------
Confidence 346789999999999999998875 5678999999 9888877641 2577777765321 0
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccC---CeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKP---GAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~Lkp---gG~l~~~~~ 184 (222)
+ .||+|++...+++. ..+++++.+.||| ||++++.+.
T Consensus 245 -----------p--~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 245 -----------P--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp -----------C--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred -----------C--CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3 39999998888753 2689999999999 999988644
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.93 E-value=5.7e-10 Score=92.09 Aligned_cols=83 Identities=16% Similarity=0.191 Sum_probs=65.0
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCCh-------HHHHHHHHHHHhcCCCCCceeEEecCCccccccccccc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDP-------QVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERV 129 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~-------~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (222)
.++.+|||+|||+|..++.+++.+ .+|+|+|+++ .+++.|++++..+++. .++++...|...+..
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-~ri~~~~~d~~~~l~------ 153 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTA-ARINLHFGNAAEQMP------ 153 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-TTEEEEESCHHHHHH------
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-cCeEEEECCHHHHHH------
Confidence 457899999999999999999875 6899999999 9999999988777764 258898888754310
Q ss_pred ccchhccccccccCCCCC--CCeeEEEecccccc
Q 047371 130 DGVVEYLSSHEIRGISET--EEYDVVIANILLNP 161 (222)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~--~~~D~v~~~~~~~~ 161 (222)
.+ ++ ++||+|++++++.+
T Consensus 154 -~~-------------~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 -AL-------------VKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp -HH-------------HHHHCCCSEEEECCCC--
T ss_pred -hh-------------hccCCCccEEEECCCCCC
Confidence 00 22 67999999998764
No 274
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.93 E-value=8.7e-09 Score=93.20 Aligned_cols=141 Identities=18% Similarity=0.223 Sum_probs=97.8
Q ss_pred cCCcchhHHHHHHHHhhhc--CCCcEEEEccCCCHHHHHHHHh--------------CCCEEEEEeCChHHHHHHHHHHH
Q 047371 39 TGEHATTKLCLLLLQSLIK--GGELFLDYGTGSGILGIAAIKF--------------GAAMFVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~--~~~~vLD~G~G~G~~~~~la~~--------------~~~~v~gvD~s~~~l~~a~~~~~ 102 (222)
.|++.|++.+.+++...+. ++.+|+|.+||+|.+...+.++ ...+++|+|+++.+...|+.++.
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 4778888888888877754 5679999999999998876542 12469999999999999999998
Q ss_pred hcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-------------------HH
Q 047371 103 LNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------------------LP 163 (222)
Q Consensus 103 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------------------~~ 163 (222)
.+++.. ..+...+...... ....+..+||+|++|||+.. ..
T Consensus 276 lhg~~~--~~I~~~dtL~~~~------------------~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~ 335 (530)
T 3ufb_A 276 LHGLEY--PRIDPENSLRFPL------------------REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAM 335 (530)
T ss_dssp HHTCSC--CEEECSCTTCSCG------------------GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHH
T ss_pred hcCCcc--ccccccccccCch------------------hhhcccccceEEEecCCCCccccccccccCchhcccchhHH
Confidence 888763 3444555432210 01113457999999999852 11
Q ss_pred HHHHHHHHccc-------CCeEEEEe---cCC--CCcHHHHHHHHHhh
Q 047371 164 QLADHIVSYAK-------PGAVVGIS---GIL--SEQLPRIINRYSEF 199 (222)
Q Consensus 164 ~~l~~~~~~Lk-------pgG~l~~~---~~~--~~~~~~~~~~~~~~ 199 (222)
.+++++.+.|| +||++.+. +++ ......+++.+.+.
T Consensus 336 ~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~ 383 (530)
T 3ufb_A 336 LFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKN 383 (530)
T ss_dssp HHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhc
Confidence 35788888887 69997763 211 22334577766654
No 275
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.93 E-value=6.3e-09 Score=89.33 Aligned_cols=94 Identities=17% Similarity=0.118 Sum_probs=72.8
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++.+|||+|||+|.++..+++. +..+++++|+ +.+++.|++ . .++++...|... ..
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--~~v~~~~~d~~~-~~------------ 249 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N--ENLNFVGGDMFK-SI------------ 249 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C--SSEEEEECCTTT-CC------------
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C--CCcEEEeCccCC-CC------------
Confidence 46789999999999999998875 5568999999 778766653 1 257777776532 11
Q ss_pred cccccccCCCCCCCeeEEEeccccccH-----HHHHHHHHHcccC---CeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL-----PQLADHIVSYAKP---GAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~Lkp---gG~l~~~~~ 184 (222)
+ .||+|+++..+++. ..+++++.+.||| ||.+++.+.
T Consensus 250 ----------~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 250 ----------P--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp ----------C--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred ----------C--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3 49999999888752 3689999999999 999998544
No 276
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.90 E-value=5.2e-09 Score=88.18 Aligned_cols=95 Identities=17% Similarity=0.282 Sum_probs=70.0
Q ss_pred HHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccc
Q 047371 47 LCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 47 ~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (222)
++.+++..+ .+++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.|++++..++ .++.+...+...+..
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~~~l~~- 89 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADF- 89 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHH-
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCHHHHHH-
Confidence 334444333 457889999999999999998876 45799999999999999999987766 378898888755421
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecccccc
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
..... ...+||.|++++++..
T Consensus 90 ---~l~~~-------------g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 90 ---LLKTL-------------GIEKVDGILMDLGVST 110 (301)
T ss_dssp ---HHHHT-------------TCSCEEEEEEECSCCH
T ss_pred ---HHHhc-------------CCCCCCEEEEcCccch
Confidence 00000 1257999999987653
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.88 E-value=7e-09 Score=85.23 Aligned_cols=92 Identities=16% Similarity=0.207 Sum_probs=65.8
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCE--EEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAM--FVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..++.+|||+|||+|.++. +++. .+ |+|+|+++.+++.++++.... .++++..+|+..+.+. ..
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~~--~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i~~D~~~~~~~------~~- 84 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVGE--RLDQLTVIELDRDLAARLQTHPFLG----PKLTIYQQDAMTFNFG------EL- 84 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHHT--TCSCEEEECCCHHHHHHHHTCTTTG----GGEEEECSCGGGCCHH------HH-
T ss_pred CCCcCEEEEECCCCcHHHH-hhhC--CCCeEEEEECCHHHHHHHHHHhccC----CceEEEECchhhCCHH------Hh-
Confidence 4578899999999999999 7543 45 999999999999999876432 3788888887655320 00
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHH
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVS 171 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~ 171 (222)
.+ ..+..+.|++|+|++....++.++..
T Consensus 85 --------~~--~~~~~~~vvsNlPY~i~~~il~~ll~ 112 (252)
T 1qyr_A 85 --------AE--KMGQPLRVFGNLPYNISTPLMFHLFS 112 (252)
T ss_dssp --------HH--HHTSCEEEEEECCTTTHHHHHHHHHT
T ss_pred --------hc--ccCCceEEEECCCCCccHHHHHHHHh
Confidence 00 01235899999999876666544443
No 278
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.83 E-value=1.8e-09 Score=83.24 Aligned_cols=105 Identities=9% Similarity=0.165 Sum_probs=76.5
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++|.+|||+|||. +++|+++.+++.|+++... ++.+...+...+.. .+.
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~------~~~~~~~d~~~~~~------~~~--- 59 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN------EGRVSVENIKQLLQ------SAH--- 59 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT------TSEEEEEEGGGGGG------GCC---
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc------CcEEEEechhcCcc------ccC---
Confidence 57899999999996 2389999999999987532 35677776654421 000
Q ss_pred cccccccCCCCCCCeeEEEeccccccH----HHHHHHHHHcccCCeEEEEecCC---------CCcHHHHHHHHHhh-h
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL----PQLADHIVSYAKPGAVVGISGIL---------SEQLPRIINRYSEF-L 200 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~---------~~~~~~~~~~~~~~-~ 200 (222)
++++||+|+++..+++. ..++++++++|||||++++.... .....++.+.+... |
T Consensus 60 ----------~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 60 ----------KESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp ----------CSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred ----------CCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 46789999998877765 67899999999999999985321 12356777777664 5
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.78 E-value=3e-08 Score=90.98 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=81.3
Q ss_pred hhHHHHHHHHhhhc------CCCcEEEEccCCCHHHHHHH---HhCCC--EEEEEeCChHHHHHHHHHHHhcCCCCCcee
Q 047371 44 TTKLCLLLLQSLIK------GGELFLDYGTGSGILGIAAI---KFGAA--MFVGVDIDPQVIKSAHQNAALNNIGPKKIK 112 (222)
Q Consensus 44 ~~~~~~~~l~~~~~------~~~~vLD~G~G~G~~~~~la---~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~ 112 (222)
+.+++.+.|..... .+..|+|+|||+|.+....+ +.... +|+|+|-|+ +...|++..+.+++. ++|+
T Consensus 337 Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~-dkVt 414 (637)
T 4gqb_A 337 YQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWG-SQVT 414 (637)
T ss_dssp HHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTG-GGEE
T ss_pred HHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCC-CeEE
Confidence 44555555544321 23479999999998855444 33323 689999998 667788888888887 6899
Q ss_pred EEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccc-----cccHHHHHHHHHHcccCCeEEE
Q 047371 113 LHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANIL-----LNPLPQLADHIVSYAKPGAVVG 180 (222)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~-----~~~~~~~l~~~~~~LkpgG~l~ 180 (222)
++.++.+.+. ..+++|+|++-.+ .+.+...+....|.|||||.++
T Consensus 415 VI~gd~eev~-----------------------LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 415 VVSSDMREWV-----------------------APEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEESCTTTCC-----------------------CSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEeCcceecc-----------------------CCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9999887663 4578999998543 2335577888899999999865
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.75 E-value=1.6e-07 Score=78.20 Aligned_cols=141 Identities=9% Similarity=-0.071 Sum_probs=93.7
Q ss_pred CCCcEEEEccCCCHHHHHHHHh------CCCEEEEEeCCh--------------------------HHHHHHHHHHHhcC
Q 047371 58 GGELFLDYGTGSGILGIAAIKF------GAAMFVGVDIDP--------------------------QVIKSAHQNAALNN 105 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~------~~~~v~gvD~s~--------------------------~~l~~a~~~~~~~~ 105 (222)
....|||+|+..|..++.++.. +..+|+++|..+ ..++.+++++...+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4668999999999988877642 257899999642 14677899999888
Q ss_pred CCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccc-ccHHHHHHHHHHcccCCeEEEEecC
Q 047371 106 IGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILL-NPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 106 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+..+++++..+++..... .+ +.++||+|+++.-. .++...++.+...|+|||++++...
T Consensus 186 l~~~~I~li~Gda~etL~-------~~-------------~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLP-------TA-------------PIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHHHST-------TC-------------CCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHHHHh-------hC-------------CCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 843589999987744310 01 35689999998755 3456789999999999999999766
Q ss_pred CC-CcHHHHHHHHHhhhhcceecccCCceEeeccc
Q 047371 185 LS-EQLPRIINRYSEFLEDILVSEKDDWRCVSGTK 218 (222)
Q Consensus 185 ~~-~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~k 218 (222)
.. ....+..+.+............-+|..+.++|
T Consensus 246 ~~~~G~~~Av~Ef~~~~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 246 MMCPPCKDAVDEYRAKFDIADELITIDRDGVYWQR 280 (282)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSCCEECSSSCEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCceEEEEecCEEEEEEe
Confidence 32 22222222222222222223334455555555
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.73 E-value=4.8e-08 Score=84.27 Aligned_cols=145 Identities=18% Similarity=0.138 Sum_probs=95.6
Q ss_pred cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc---CCC---CCceeEEecCCcccccccccccc
Q 047371 57 KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN---NIG---PKKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~---~~~---~~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
.++++||-+|.|.|..+..+.+++..+++.+|+++.+++.|++.+... ... .+++++...|+..+..+..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~---- 279 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA---- 279 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH----
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh----
Confidence 456899999999999999999887789999999999999999876421 111 1346777777644421000
Q ss_pred cchhccccccccCCCCCCCeeEEEecccc--------c-----cHHHHHHHHHHcccCCeEEEEe-c--CCCCcHHHHHH
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILL--------N-----PLPQLADHIVSYAKPGAVVGIS-G--ILSEQLPRIIN 194 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~--------~-----~~~~~l~~~~~~LkpgG~l~~~-~--~~~~~~~~~~~ 194 (222)
...++||+|+.+..- . ...++++.+.+.|+|||+++.. + ...+....+.+
T Consensus 280 --------------~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~ 345 (381)
T 3c6k_A 280 --------------KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEE 345 (381)
T ss_dssp --------------HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHH
T ss_pred --------------hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHH
Confidence 024679999987421 1 1356789999999999999873 2 22233345555
Q ss_pred HHHhhhhccee--------cccCCceEeecccC
Q 047371 195 RYSEFLEDILV--------SEKDDWRCVSGTKF 219 (222)
Q Consensus 195 ~~~~~~~~~~~--------~~~~~w~~~~~~k~ 219 (222)
.+...|..+.. .-.+.|.=..+.|+
T Consensus 346 tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 346 QLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 66655433321 11377876666554
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.73 E-value=1.6e-07 Score=77.51 Aligned_cols=134 Identities=10% Similarity=0.031 Sum_probs=85.0
Q ss_pred HHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 48 CLLLLQSL-IKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 48 ~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
+.++.++. ++++.+|||+|||+|.++..++.. +...+.|+|+.-......... ...+ .++.....+.+..
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g---~~ii~~~~~~dv~---- 134 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG---WNIITFKDKTDIH---- 134 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT---GGGEEEECSCCTT----
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC---CCeEEEeccceeh----
Confidence 33444333 678889999999999999988765 556788888874220000000 0000 0222222222111
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEeccccc----cH-----HHHHHHHHHcccCC-eEEEEecCC--CCcHHHHH
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLN----PL-----PQLADHIVSYAKPG-AVVGISGIL--SEQLPRII 193 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~----~~-----~~~l~~~~~~Lkpg-G~l~~~~~~--~~~~~~~~ 193 (222)
.+ +.++||+|+++...+ .. ..+++.+.+.|+|| |.+++.-+. .....++.
T Consensus 135 -----~l-------------~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~ 196 (277)
T 3evf_A 135 -----RL-------------EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKL 196 (277)
T ss_dssp -----TS-------------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHH
T ss_pred -----hc-------------CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHH
Confidence 11 467899999987544 21 13578889999999 999998676 77788888
Q ss_pred HHHHhhhhcceecc
Q 047371 194 NRYSEFLEDILVSE 207 (222)
Q Consensus 194 ~~~~~~~~~~~~~~ 207 (222)
+.++..|..+....
T Consensus 197 ~~lk~~F~~V~~~K 210 (277)
T 3evf_A 197 ELLQRRFGGTVIRN 210 (277)
T ss_dssp HHHHHHHCCEEECC
T ss_pred HHHHHhcCCEEEEe
Confidence 88888887665543
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.71 E-value=1.7e-08 Score=83.45 Aligned_cols=134 Identities=12% Similarity=0.050 Sum_probs=86.7
Q ss_pred HHHHHHhh-hcCCCcEEEEccCCCHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 48 CLLLLQSL-IKGGELFLDYGTGSGILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 48 ~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
+.++.+++ ++++.+|||+|||+|.++..++. .+...++|+|+...+...+... ...+ .++.....+.+..
T Consensus 79 L~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g---~~ii~~~~~~dv~---- 150 (282)
T 3gcz_A 79 LRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG---WNLIRFKDKTDVF---- 150 (282)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT---GGGEEEECSCCGG----
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC---CceEEeeCCcchh----
Confidence 44444444 67888999999999999998875 4667899999976421111000 0001 1222111111111
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEecccccc-------H--HHHHHHHHHcccCC--eEEEEecCC--CCcHHHH
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------L--PQLADHIVSYAKPG--AVVGISGIL--SEQLPRI 192 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~--~~~l~~~~~~Lkpg--G~l~~~~~~--~~~~~~~ 192 (222)
.+ +..++|+|+|+...+. . ..+++-+.+.|+|| |.+++.-+. .....++
T Consensus 151 -----~l-------------~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l 212 (282)
T 3gcz_A 151 -----NM-------------EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEE 212 (282)
T ss_dssp -----GS-------------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHH
T ss_pred -----hc-------------CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHH
Confidence 11 5678999999876541 1 13578888999999 999998776 7788888
Q ss_pred HHHHHhhhhcceecc
Q 047371 193 INRYSEFLEDILVSE 207 (222)
Q Consensus 193 ~~~~~~~~~~~~~~~ 207 (222)
.+.++..|..+....
T Consensus 213 ~~~lk~~F~~V~~~K 227 (282)
T 3gcz_A 213 LSRLQLKHGGGLVRV 227 (282)
T ss_dssp HHHHHHHHCCEEECC
T ss_pred HHHHHHhcCCEEEEc
Confidence 888888887665543
No 284
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.67 E-value=7.5e-08 Score=88.71 Aligned_cols=117 Identities=15% Similarity=0.214 Sum_probs=77.6
Q ss_pred hHHHHHHHHhhhcC---CCcEEEEccCCCHHHHHH---HH-hC----------CCEEEEEeCChHHHHHHHHHHHhcCCC
Q 047371 45 TKLCLLLLQSLIKG---GELFLDYGTGSGILGIAA---IK-FG----------AAMFVGVDIDPQVIKSAHQNAALNNIG 107 (222)
Q Consensus 45 ~~~~~~~l~~~~~~---~~~vLD~G~G~G~~~~~l---a~-~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~ 107 (222)
.+.+...+..+.+. ++.|||+|||+|.++... ++ .+ ..+|+|+|-|+.++..++.... +++.
T Consensus 393 ~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~ 471 (745)
T 3ua3_A 393 GEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK 471 (745)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT
T ss_pred HHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC
Confidence 34444444444332 458999999999986533 22 11 2489999999977766555443 6776
Q ss_pred CCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccc-----cHHHHHHHHHHcccCCeEEE
Q 047371 108 PKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN-----PLPQLADHIVSYAKPGAVVG 180 (222)
Q Consensus 108 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-----~~~~~l~~~~~~LkpgG~l~ 180 (222)
++|+++.++.+.+..-. +. ...+++|+|++-.+-. .....+..+.+.|||||.++
T Consensus 472 -d~VtVI~gd~eev~lp~-----~~------------~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 472 -RRVTIIESDMRSLPGIA-----KD------------RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp -TCSEEEESCGGGHHHHH-----HH------------TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred -CeEEEEeCchhhccccc-----cc------------CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 57999999887663200 00 0257899999965422 34568888889999999765
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.57 E-value=6.3e-08 Score=79.77 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=65.1
Q ss_pred cCC--CcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh-------cC-CCCCceeEEecCCcccccccc
Q 047371 57 KGG--ELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL-------NN-IGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 57 ~~~--~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~-------~~-~~~~~v~~~~~~~~~~~~~~~ 126 (222)
+++ .+|||+|||+|..++.+++.+ .+|+++|.++.+...++.++.. ++ +. .++++...|...+.
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g-~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~-~~i~~~~~D~~~~L---- 158 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVG-CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQ-ERLQLIHASSLTAL---- 158 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHT-CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHH-HHEEEEESCHHHHS----
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhh-cCEEEEECCHHHHH----
Confidence 567 899999999999999999886 4799999999876666665532 12 21 36788888765431
Q ss_pred cccccchhccccccccCCCCCCCeeEEEeccccccH--HHHHHHHHHcccCC
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPL--PQLADHIVSYAKPG 176 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~--~~~l~~~~~~Lkpg 176 (222)
.. ...+||+|+++|++... ...+++..+.|++.
T Consensus 159 ---------------~~--~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l 193 (258)
T 2oyr_A 159 ---------------TD--ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSL 193 (258)
T ss_dssp ---------------TT--CSSCCSEEEECCCCCCCCC-----HHHHHHHHH
T ss_pred ---------------Hh--CcccCCEEEEcCCCCCcccchHHHHHHHHHHHh
Confidence 00 12369999999998652 22344444555443
No 286
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.43 E-value=6.8e-07 Score=74.30 Aligned_cols=127 Identities=12% Similarity=0.071 Sum_probs=82.6
Q ss_pred hhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 55 LIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 55 ~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++++.+|||+||++|.++..+++. +...|+|+|+.......... ....+ .++.......+..
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~---~~iv~~~~~~di~------------ 141 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG---WNIVKFKDKSNVF------------ 141 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT---GGGEEEECSCCTT------------
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC---CceEEeecCceee------------
Confidence 3678999999999999999999974 66689999996531000000 00000 0111111111111
Q ss_pred hccccccccCCCCCCCeeEEEecccccc---------HHHHHHHHHHcccCC-eEEEEecCC--CCcHHHHHHHHHhhhh
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP---------LPQLADHIVSYAKPG-AVVGISGIL--SEQLPRIINRYSEFLE 201 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------~~~~l~~~~~~Lkpg-G~l~~~~~~--~~~~~~~~~~~~~~~~ 201 (222)
.+ ...++|+|+++...+. ...+++-+.+.|+|| |.+++.-+. .....++...+...|.
T Consensus 142 ---------~l-~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~ 211 (300)
T 3eld_A 142 ---------TM-PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFG 211 (300)
T ss_dssp ---------TS-CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHC
T ss_pred ---------ec-CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCC
Confidence 11 4568999999765441 123578888999999 999998777 7788888888888887
Q ss_pred cceecc
Q 047371 202 DILVSE 207 (222)
Q Consensus 202 ~~~~~~ 207 (222)
.+....
T Consensus 212 ~V~~~K 217 (300)
T 3eld_A 212 GGIVRV 217 (300)
T ss_dssp CEEECC
T ss_pred cEEEEe
Confidence 665543
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.32 E-value=4.1e-06 Score=62.65 Aligned_cols=103 Identities=13% Similarity=-0.004 Sum_probs=65.6
Q ss_pred hHHHHHHHHhhhcCCCcEEEEccCCC-HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccc
Q 047371 45 TKLCLLLLQSLIKGGELFLDYGTGSG-ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTA 123 (222)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLD~G~G~G-~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~ 123 (222)
...+.+.+.+...++.+|||+|||+| ..+..|++.....|+++|+++.+++ +...|.-....
T Consensus 22 ~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-----------------~v~dDiF~P~~ 84 (153)
T 2k4m_A 22 WNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-----------------IVRDDITSPRM 84 (153)
T ss_dssp HHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-----------------EECCCSSSCCH
T ss_pred HHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-----------------eEEccCCCCcc
Confidence 33445555555566789999999999 6999999743468999999996655 33333211100
Q ss_pred ccccccccchhccccccccCCCCCCCeeEE-EeccccccHHHHHHHHHHcccCCeEEEEecCCCCc
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVV-IANILLNPLPQLADHIVSYAKPGAVVGISGILSEQ 188 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 188 (222)
...+.||+| ..|||.+-...+++ +++ +-|.-+++..+..+.
T Consensus 85 ---------------------~~Y~~~DLIYsirPP~El~~~i~~-lA~--~v~adliI~pL~~E~ 126 (153)
T 2k4m_A 85 ---------------------EIYRGAALIYSIRPPAEIHSSLMR-VAD--AVGARLIIKPLTGED 126 (153)
T ss_dssp ---------------------HHHTTEEEEEEESCCTTTHHHHHH-HHH--HHTCEEEEECBTTBC
T ss_pred ---------------------cccCCcCEEEEcCCCHHHHHHHHH-HHH--HcCCCEEEEcCCCCc
Confidence 012479999 56888875554544 333 345567776555444
No 288
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.29 E-value=1.8e-06 Score=70.34 Aligned_cols=119 Identities=11% Similarity=0.031 Sum_probs=69.7
Q ss_pred hhcCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCC--Cce---eEEec-CCccccccccc
Q 047371 55 LIKGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGP--KKI---KLHLV-PDRTFTASMNE 127 (222)
Q Consensus 55 ~~~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~v---~~~~~-~~~~~~~~~~~ 127 (222)
+++|+.+|+|+||+.|..+..+++. +-..|.|.++.... ....+.. ..+ .+..+ |....
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--------~~~P~~~~~~Gv~~i~~~~G~Df~~~------ 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--------HEEPMLMQSYGWNIVTMKSGVDVFYK------ 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--------SCCCCCCCSTTGGGEEEECSCCGGGS------
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--------ccCCCcccCCCceEEEeeccCCccCC------
Confidence 3789999999999999999998875 22233444443210 0011110 122 22223 43221
Q ss_pred ccccchhccccccccCCCCCCCeeEEEecccccc-------H--HHHHHHHHHcccCCe-EEEEecCCC--CcHHHHHHH
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-------L--PQLADHIVSYAKPGA-VVGISGILS--EQLPRIINR 195 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-------~--~~~l~~~~~~LkpgG-~l~~~~~~~--~~~~~~~~~ 195 (222)
+..++|+|+|+..-.. . ...++-+.+.|+||| .+++.-+.. ....++.+.
T Consensus 136 ------------------~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~ 197 (269)
T 2px2_A 136 ------------------PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLES 197 (269)
T ss_dssp ------------------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHH
T ss_pred ------------------CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHH
Confidence 4567999999764321 1 125677779999999 888865553 334444556
Q ss_pred HHhhhhccee
Q 047371 196 YSEFLEDILV 205 (222)
Q Consensus 196 ~~~~~~~~~~ 205 (222)
++..|....+
T Consensus 198 lk~~F~~vkv 207 (269)
T 2px2_A 198 LQRRFGGGLV 207 (269)
T ss_dssp HHHHHCCEEE
T ss_pred HHHHcCCEEE
Confidence 6666655543
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.28 E-value=3e-06 Score=70.20 Aligned_cols=91 Identities=18% Similarity=0.273 Sum_probs=67.2
Q ss_pred HHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccc
Q 047371 47 LCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASM 125 (222)
Q Consensus 47 ~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (222)
++.+++..+ .+++..++|.+||.|..+..+++. ..+|+|+|.++.+++.|++ +.. +++.++..+...+..
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f~~l~~-- 80 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNFRHLKR-- 80 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCGGGHHH--
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCcchHHH--
Confidence 344444444 567889999999999999999887 5799999999999999988 533 378898888765521
Q ss_pred ccccccchhccccccccCCCCCCCeeEEEecccccc
Q 047371 126 NERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
.+... ..+++|.|++++.+..
T Consensus 81 --~L~~~-------------g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 81 --HLAAL-------------GVERVDGILADLGVSS 101 (285)
T ss_dssp --HHHHT-------------TCSCEEEEEEECSCCH
T ss_pred --HHHHc-------------CCCCcCEEEeCCcccc
Confidence 01111 3357999999887654
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.27 E-value=2.3e-06 Score=70.30 Aligned_cols=123 Identities=13% Similarity=0.082 Sum_probs=75.1
Q ss_pred CCCcEEEEccCCCHHHHHHHH--------hCC-----CEEEEEeCCh---HHHH-----------HHHHHHHhcC-----
Q 047371 58 GGELFLDYGTGSGILGIAAIK--------FGA-----AMFVGVDIDP---QVIK-----------SAHQNAALNN----- 105 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~--------~~~-----~~v~gvD~s~---~~l~-----------~a~~~~~~~~----- 105 (222)
++.+|||+|+|+|..+..+++ .+. .+++++|..| ..+. .|+..+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 346899999999988776543 221 4899999887 4444 4455444311
Q ss_pred -----CC--CCceeEEecCCcccccccccccccchhccccccccCCC--CCCCeeEEEecccc---c---cHHHHHHHHH
Q 047371 106 -----IG--PKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGIS--ETEEYDVVIANILL---N---PLPQLADHIV 170 (222)
Q Consensus 106 -----~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~v~~~~~~---~---~~~~~l~~~~ 170 (222)
+. ..++++..+|+..... .+. ...+||+|+.++.- + +..++++.+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~-------------------~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~ 200 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELIS-------------------QLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMA 200 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGG-------------------GSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHH
T ss_pred hhheeccCCceEEEEEECcHHHHHh-------------------hcccccCCeEEEEEECCCCcccChhhcCHHHHHHHH
Confidence 11 1245566666543210 000 12379999997521 1 2567999999
Q ss_pred HcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcc
Q 047371 171 SYAKPGAVVGISGILSEQLPRIINRYSEF-LEDI 203 (222)
Q Consensus 171 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~ 203 (222)
++|+|||.++..+. ...+...+... |...
T Consensus 201 ~~L~pGG~l~tysa----a~~vrr~L~~aGF~v~ 230 (257)
T 2qy6_A 201 RLARPGGTLATFTS----AGFVRRGLQEAGFTMQ 230 (257)
T ss_dssp HHEEEEEEEEESCC----BHHHHHHHHHHTEEEE
T ss_pred HHcCCCcEEEEEeC----CHHHHHHHHHCCCEEE
Confidence 99999999987432 12455555554 6543
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.25 E-value=1.9e-05 Score=67.86 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=65.1
Q ss_pred hcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 56 IKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+++|+++||+||++|.++..+++.+ .+|+|+|..+-.- .+... .++++...|...+..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg-~~V~aVD~~~l~~-----~l~~~----~~V~~~~~d~~~~~~------------ 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN-MWVYSVDNGPMAQ-----SLMDT----GQVTWLREDGFKFRP------------ 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT-CEEEEECSSCCCH-----HHHTT----TCEEEECSCTTTCCC------------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC-CEEEEEEhhhcCh-----hhccC----CCeEEEeCccccccC------------
Confidence 5689999999999999999999886 6899999865211 11111 377788777654421
Q ss_pred cccccccCCCCCCCeeEEEeccccccH--HHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPL--PQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.+++|+|+|+...++. ..++.........++.++...+
T Consensus 267 ----------~~~~~D~vvsDm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL 307 (375)
T 4auk_A 267 ----------TRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKL 307 (375)
T ss_dssp ----------CSSCEEEEEECCSSCHHHHHHHHHHHHHTTSCSEEEEEEEC
T ss_pred ----------CCCCcCEEEEcCCCChHHhHHHHHHHHhccccceEEEEEEe
Confidence 45689999999877642 2234444444444566555434
No 292
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.23 E-value=9.3e-06 Score=68.87 Aligned_cols=71 Identities=20% Similarity=0.233 Sum_probs=54.8
Q ss_pred hHHHHHHHHhh-hcCCCcEEEEccCCCHHHHHHHHh--CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 45 TKLCLLLLQSL-IKGGELFLDYGTGSGILGIAAIKF--GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 45 ~~~~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
+-++.+.+..+ +++|..++|..||.|..+..+++. +.++|+|+|.++.+++.|+ ++ ...++.++..+...+
T Consensus 43 pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-----~~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-----DDPRFSIIHGPFSAL 116 (347)
T ss_dssp CTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-----CCTTEEEEESCGGGH
T ss_pred cccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-----cCCcEEEEeCCHHHH
Confidence 34555666555 578999999999999999988875 4579999999999999984 33 124788888877554
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.17 E-value=4.6e-05 Score=61.35 Aligned_cols=126 Identities=10% Similarity=0.011 Sum_probs=76.8
Q ss_pred HHHHHHhh-hcCCCcEEEEccCCCHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEec-CCcccccc
Q 047371 48 CLLLLQSL-IKGGELFLDYGTGSGILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLV-PDRTFTAS 124 (222)
Q Consensus 48 ~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~-~~~~~~~~ 124 (222)
+.++.+++ ++++..|+|+||++|.++..++. .+..+|+|+|+...--+.= ......|.+ .++|... |....
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn--~v~fk~gvDv~~~--- 140 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWN--IVKLMSGKDVFYL--- 140 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTT--SEEEECSCCGGGC---
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcC--ceEEEeccceeec---
Confidence 34444444 67889999999999999997665 4667899999976321000 000112222 4566655 43222
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecccccc---------HHHHHHHHHHcccCCeEEEEecCCCCc--HHHHH
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---------LPQLADHIVSYAKPGAVVGISGILSEQ--LPRII 193 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~ 193 (222)
+..++|+|+|+..-.. ....++.+.+.|++ |-+++.-+.... ..+..
T Consensus 141 ---------------------~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l 198 (267)
T 3p8z_A 141 ---------------------PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHL 198 (267)
T ss_dssp ---------------------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHH
T ss_pred ---------------------CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHH
Confidence 4577999999754322 12267888899999 677765444444 44555
Q ss_pred HHHHhhhh
Q 047371 194 NRYSEFLE 201 (222)
Q Consensus 194 ~~~~~~~~ 201 (222)
+.++..|.
T Consensus 199 ~~lq~~fg 206 (267)
T 3p8z_A 199 ERLQRKHG 206 (267)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 55555443
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.13 E-value=6.7e-06 Score=68.77 Aligned_cols=58 Identities=28% Similarity=0.357 Sum_probs=48.8
Q ss_pred HHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc
Q 047371 46 KLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN 104 (222)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~ 104 (222)
.++..++.....+++.|||++||+|.+++.+++.+ .+++|+|+++.+++.|++++...
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g-~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWG-RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHHh
Confidence 45555555545689999999999999999998886 68999999999999999998654
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.07 E-value=3.5e-05 Score=63.94 Aligned_cols=128 Identities=9% Similarity=0.002 Sum_probs=75.0
Q ss_pred HHHHHHhh-hcCCCcEEEEccCCCHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEec-CCcccccc
Q 047371 48 CLLLLQSL-IKGGELFLDYGTGSGILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLV-PDRTFTAS 124 (222)
Q Consensus 48 ~~~~l~~~-~~~~~~vLD~G~G~G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~-~~~~~~~~ 124 (222)
+.++..++ ++++..|||+||++|.++..++. .+...|+|+|+...--+.= ......+. ..+.+... |+..+
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w--~lV~~~~~~Dv~~l--- 156 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW--NIVTMKSGVDVFYR--- 156 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG--GGEEEECSCCTTSS---
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC--cceEEEeccCHhhC---
Confidence 34444444 67888999999999999996665 4667899999976311000 00001111 12333333 22222
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEecccccc---------HHHHHHHHHHcccCC-eEEEEecCCC--CcHHHH
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---------LPQLADHIVSYAKPG-AVVGISGILS--EQLPRI 192 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---------~~~~l~~~~~~Lkpg-G~l~~~~~~~--~~~~~~ 192 (222)
+..++|+|+|+..-.. ....|+.+.+.|+++ |-+++.-+.. ....+.
T Consensus 157 ---------------------~~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~ 215 (321)
T 3lkz_A 157 ---------------------PSECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEK 215 (321)
T ss_dssp ---------------------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHH
T ss_pred ---------------------CCCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHH
Confidence 3467999999876321 112677778899999 8777753433 444455
Q ss_pred HHHHHhhhhc
Q 047371 193 INRYSEFLED 202 (222)
Q Consensus 193 ~~~~~~~~~~ 202 (222)
.+.++..|..
T Consensus 216 l~~lq~~fgg 225 (321)
T 3lkz_A 216 MELLQRRYGG 225 (321)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhCC
Confidence 5555555433
No 296
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.06 E-value=2.1e-05 Score=68.12 Aligned_cols=105 Identities=13% Similarity=-0.017 Sum_probs=65.7
Q ss_pred CCcEEEEccCCCHHHHHHHHh------------------CCCEEEEEeCC-----------hHHHHHHHHHHHhcCCCCC
Q 047371 59 GELFLDYGTGSGILGIAAIKF------------------GAAMFVGVDID-----------PQVIKSAHQNAALNNIGPK 109 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la~~------------------~~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~~ 109 (222)
..+|+|+||++|..++.+... +.-+|+..|+- +...+.+++ ..+-. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~-~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRK-I 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCC-T
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCC-C
Confidence 468999999999888866532 22468888886 333333222 11211 1
Q ss_pred ceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEeccccccHHH-------------------------
Q 047371 110 KIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQ------------------------- 164 (222)
Q Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~------------------------- 164 (222)
+.-|..+....|- ..+.+.+++|+++++..+||+.+
T Consensus 129 ~~~f~~gvpgSFy-------------------~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp 189 (384)
T 2efj_A 129 GSCLIGAMPGSFY-------------------SRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASR 189 (384)
T ss_dssp TSEEEEECCSCTT-------------------SCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSC
T ss_pred CceEEEecchhhh-------------------hccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCC
Confidence 2234444444331 11237899999999998887321
Q ss_pred -----------------HHHHHHHcccCCeEEEEecCCC
Q 047371 165 -----------------LADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 165 -----------------~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
+|+..++.|+|||.+++.....
T Consensus 190 ~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 190 PPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecC
Confidence 2555589999999999975543
No 297
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.06 E-value=1.2e-05 Score=65.97 Aligned_cols=61 Identities=26% Similarity=0.370 Sum_probs=49.7
Q ss_pred hHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCC
Q 047371 45 TKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNI 106 (222)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 106 (222)
..++..++.....+|+.|||.+||+|..+..+.+.+ .+++|+|+++..++.|++++..+++
T Consensus 199 ~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~g-r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 199 RDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLG-RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 355556665556789999999999999999988886 6899999999999999999876553
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.02 E-value=7.1e-06 Score=68.00 Aligned_cols=110 Identities=9% Similarity=0.107 Sum_probs=78.1
Q ss_pred HHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc
Q 047371 48 CLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 48 ~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 127 (222)
....+..+ .+..+||+.+|||.+++.+.+. ..+++.+|.++..++..++|+.. .+++.+...|......
T Consensus 83 yf~~l~~~--n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~~~~L~---- 151 (283)
T 2oo3_A 83 YISVIKQI--NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDGVSKLN---- 151 (283)
T ss_dssp HHHHHHHH--SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCHHHHHH----
T ss_pred HHHHHHHh--cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcHHHHHH----
Confidence 44444443 4677999999999999998884 48999999999999999988754 1467787777533210
Q ss_pred ccccchhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHH--cccCCeEEEEe
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVS--YAKPGAVVGIS 182 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~--~LkpgG~l~~~ 182 (222)
.+ ..+..+||+|+++||+.. +..+++.+.+ .+.++|.+++-
T Consensus 152 ---~l-----------~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 152 ---AL-----------LPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp ---HH-----------CSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ---Hh-----------cCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEE
Confidence 00 013457999999999983 4455544444 46788888874
No 299
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.94 E-value=3.2e-05 Score=66.85 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=32.9
Q ss_pred CCCCeeEEEeccccccHH-----------------------------------------HHHHHHHHcccCCeEEEEecC
Q 047371 146 ETEEYDVVIANILLNPLP-----------------------------------------QLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 146 ~~~~~D~v~~~~~~~~~~-----------------------------------------~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.+++|+|+++..+|++. .+++..++.|+|||.++++..
T Consensus 147 P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 147 PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 788999999999888743 247788999999999998644
Q ss_pred C
Q 047371 185 L 185 (222)
Q Consensus 185 ~ 185 (222)
.
T Consensus 227 g 227 (374)
T 3b5i_A 227 G 227 (374)
T ss_dssp E
T ss_pred c
Confidence 3
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.77 E-value=0.00042 Score=59.34 Aligned_cols=86 Identities=9% Similarity=0.028 Sum_probs=64.4
Q ss_pred eCCCcccccCCcchhHHHHHHHHhh-hc------CCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHH
Q 047371 31 LNPGLAFGTGEHATTKLCLLLLQSL-IK------GGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 31 ~~~~~~f~~~~~~~~~~~~~~l~~~-~~------~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~ 102 (222)
..+...||+..-.....+..+++.. +. +++.|||+|.|.|.+|..|++. ...+++++|+++..+...++..
T Consensus 24 ~~~kk~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~- 102 (353)
T 1i4w_A 24 SKLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF- 102 (353)
T ss_dssp CSSCCGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-
T ss_pred cCCCCCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-
Confidence 3456677776665666666665554 33 3589999999999999999875 4578999999999998887765
Q ss_pred hcCCCCCceeEEecCCccc
Q 047371 103 LNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 103 ~~~~~~~~v~~~~~~~~~~ 121 (222)
. .++++++..|+..+
T Consensus 103 ~----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 103 E----GSPLQILKRDPYDW 117 (353)
T ss_dssp T----TSSCEEECSCTTCH
T ss_pred c----CCCEEEEECCccch
Confidence 2 24788999888544
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.60 E-value=0.0005 Score=57.12 Aligned_cols=110 Identities=10% Similarity=0.125 Sum_probs=68.6
Q ss_pred hcCCCcEEEEcc------CCCHHHHHHHHh-CC-CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc
Q 047371 56 IKGGELFLDYGT------GSGILGIAAIKF-GA-AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE 127 (222)
Q Consensus 56 ~~~~~~vLD~G~------G~G~~~~~la~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 127 (222)
++-+++|||+|+ .+|+. .+.+. +. +.++++|+.+-. .. .. .++.+|.....
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-----------sd--a~-~~IqGD~~~~~----- 165 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-----------SD--AD-STLIGDCATVH----- 165 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-----------CS--SS-EEEESCGGGEE-----
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-----------cC--CC-eEEEccccccc-----
Confidence 567899999997 55663 44444 32 499999998722 11 12 24566643321
Q ss_pred ccccchhccccccccCCCCCCCeeEEEeccccc-------------cH-HHHHHHHHHcccCCeEEEEecCCCCcHHHHH
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLN-------------PL-PQLADHIVSYAKPGAVVGISGILSEQLPRII 193 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-------------~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 193 (222)
..++||+|+++..-. .+ +..++-+.+.|+|||.+++.-+.....+.+.
T Consensus 166 ------------------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~ 227 (344)
T 3r24_A 166 ------------------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLY 227 (344)
T ss_dssp ------------------ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHH
T ss_pred ------------------cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHH
Confidence 347899999975421 12 3356778889999999999766555544444
Q ss_pred HHHHhhhhccee
Q 047371 194 NRYSEFLEDILV 205 (222)
Q Consensus 194 ~~~~~~~~~~~~ 205 (222)
+ +...|..+..
T Consensus 228 ~-lrk~F~~VK~ 238 (344)
T 3r24_A 228 K-LMGHFSWWTA 238 (344)
T ss_dssp H-HHTTEEEEEE
T ss_pred H-HHhhCCeEEE
Confidence 3 4446554443
No 302
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.51 E-value=5.8e-05 Score=64.82 Aligned_cols=105 Identities=11% Similarity=0.036 Sum_probs=68.0
Q ss_pred CcEEEEccCCCHHHHHHHHh-----------------CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccc
Q 047371 60 ELFLDYGTGSGILGIAAIKF-----------------GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~-----------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~ 122 (222)
.+|+|+||++|..++.+... +.-+|+..|+.....+.+-+.+....-. .+.-+..+....+-
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~-~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV-DGVCFINGVPGSFY 131 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC-TTCEEEEEEESCSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc-CCCEEEEecchhhh
Confidence 57999999999766543321 2357899999888877776665431100 01223333322221
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEeccccccHH------------------------------------HHH
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLP------------------------------------QLA 166 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~------------------------------------~~l 166 (222)
..+.+.+++|+++++..+||+. .+|
T Consensus 132 -------------------~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL 192 (359)
T 1m6e_X 132 -------------------GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFL 192 (359)
T ss_dssp -------------------SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHH
T ss_pred -------------------hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1123788999999998877632 247
Q ss_pred HHHHHcccCCeEEEEecC
Q 047371 167 DHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 167 ~~~~~~LkpgG~l~~~~~ 184 (222)
+..++.|+|||.+++...
T Consensus 193 ~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 193 RCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp HHHHHHBCTTCEEEEEEE
T ss_pred HHHHHHhcCCceEEEEEe
Confidence 888999999999998643
No 303
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.39 E-value=0.00039 Score=58.73 Aligned_cols=60 Identities=22% Similarity=0.325 Sum_probs=50.4
Q ss_pred HHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCC
Q 047371 46 KLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNI 106 (222)
Q Consensus 46 ~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 106 (222)
.++..++.....+|+.|||..||+|..+..+.+.+ .+.+|+|+++..++.+++++...+.
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~g-r~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERES-RKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CCEEEEeCCHHHHHHHHHHHHhccc
Confidence 55666665556789999999999999999988886 6899999999999999998865543
No 304
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.24 E-value=0.00068 Score=57.23 Aligned_cols=60 Identities=22% Similarity=0.260 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhhcCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCCh---HHHHHHHHHHHhcC
Q 047371 45 TKLCLLLLQSLIKGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDP---QVIKSAHQNAALNN 105 (222)
Q Consensus 45 ~~~~~~~l~~~~~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~---~~l~~a~~~~~~~~ 105 (222)
..++..++.....+|+.|||..||+|..+..+.+.+ .+.+|+|+++ ..++.+++++...+
T Consensus 229 ~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 445555555556789999999999999999988886 6899999999 99999999887554
No 305
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.15 E-value=0.0032 Score=53.30 Aligned_cols=44 Identities=23% Similarity=0.198 Sum_probs=39.4
Q ss_pred CCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHH
Q 047371 59 GELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~ 102 (222)
+.+++|++||.|.++.-+.+.|...+.++|+++.+++..+.|..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC
Confidence 56899999999999999888888889999999999988888763
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.05 E-value=0.0045 Score=53.33 Aligned_cols=81 Identities=19% Similarity=0.146 Sum_probs=56.5
Q ss_pred CcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccc
Q 047371 60 ELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSH 139 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (222)
.+++|++||.|.++.-+.+.|...+.++|+++.+++..+.|.. +..+...|...+... . ...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~-------~~~~~~~DI~~~~~~--~-~~~-------- 64 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP-------RSLHVQEDVSLLNAE--I-IKG-------- 64 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT-------TSEEECCCGGGCCHH--H-HHH--------
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC-------CCceEecChhhcCHH--H-HHh--------
Confidence 4799999999999999888888888999999999888877642 334555565443210 0 000
Q ss_pred cccCCCCCCCeeEEEecccccc
Q 047371 140 EIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 140 ~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
.......+|+++..+|+..
T Consensus 65 ---~~~~~~~~D~i~ggpPCQ~ 83 (376)
T 3g7u_A 65 ---FFKNDMPIDGIIGGPPCQG 83 (376)
T ss_dssp ---HHCSCCCCCEEEECCCCCT
T ss_pred ---hcccCCCeeEEEecCCCCC
Confidence 0002457999999999754
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.03 E-value=0.0008 Score=57.32 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=53.2
Q ss_pred CCcEEEEccCCCHHHHHHHHhC--CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 59 GELFLDYGTGSGILGIAAIKFG--AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
..+++|++||.|.+++-+.+.+ ...++++|+++.+++..+.|... ..+...|...+.. ..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-------~~~~~~Di~~~~~------~~~---- 64 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-------TQLLAKTIEGITL------EEF---- 64 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-------SCEECSCGGGCCH------HHH----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-------cccccCCHHHccH------hHc----
Confidence 3579999999999999888877 46899999999999998887632 2244555543311 000
Q ss_pred ccccccCCCCCCCeeEEEecccccc
Q 047371 137 SSHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
+...+|+++..+|+..
T Consensus 65 ---------~~~~~D~l~~gpPCq~ 80 (343)
T 1g55_A 65 ---------DRLSFDMILMSPPCQP 80 (343)
T ss_dssp ---------HHHCCSEEEECCC---
T ss_pred ---------CcCCcCEEEEcCCCcc
Confidence 1125899999999654
No 308
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.83 E-value=0.0057 Score=49.95 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=76.4
Q ss_pred cCCCcEEEEccCCCHHHHHHHHh--------CCCEEEEEeCChHH---------------------------HHHH---H
Q 047371 57 KGGELFLDYGTGSGILGIAAIKF--------GAAMFVGVDIDPQV---------------------------IKSA---H 98 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la~~--------~~~~v~gvD~s~~~---------------------------l~~a---~ 98 (222)
.-.-.|+|+|+-.|..+..++.. ...+++++|.-..+ +... .
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 33457999999999877765531 24789999932111 1111 1
Q ss_pred HHHHhcCCCCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccc-ccHHHHHHHHHHcccCCe
Q 047371 99 QNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILL-NPLPQLADHIVSYAKPGA 177 (222)
Q Consensus 99 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~-~~~~~~l~~~~~~LkpgG 177 (222)
.+....+...+++.++.++...... ...... +..++|+++.+.-. ......++.+...|+|||
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~---~~l~~~-------------~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GG 211 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVP---RYLAEN-------------PQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGS 211 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHH---HHHHHC-------------TTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEE
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHH---HHHHhC-------------CCCceEEEEEcCcccchHHHHHHHHHHHhCCCc
Confidence 1112233322578888887644311 111111 45679999997754 345668999999999999
Q ss_pred EEEEecCCCCcHHHHHHHHHhh
Q 047371 178 VVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
++++..+.........+++.+.
T Consensus 212 vIv~DD~~~~~w~G~~~A~~ef 233 (257)
T 3tos_A 212 IVAFDELDNPKWPGENIAMRKV 233 (257)
T ss_dssp EEEESSTTCTTCTHHHHHHHHH
T ss_pred EEEEcCCCCCCChHHHHHHHHH
Confidence 9999776432222444444444
No 309
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.76 E-value=0.0093 Score=49.97 Aligned_cols=73 Identities=18% Similarity=0.158 Sum_probs=54.0
Q ss_pred CcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccccc
Q 047371 60 ELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSSH 139 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (222)
++|+|+.||.|.++.-+.+.|...+.++|+++.+.+..+.|.. -.+...|...+...
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~--------~~~~~~DI~~i~~~--------------- 57 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS--------AKLIKGDISKISSD--------------- 57 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC--------SEEEESCGGGCCGG---------------
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC--------CCcccCChhhCCHh---------------
Confidence 3699999999999988888888889999999988888777642 13455665444210
Q ss_pred cccCCCCCCCeeEEEecccccc
Q 047371 140 EIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 140 ~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
....+|+++..+|+..
T Consensus 58 ------~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 58 ------EFPKCDGIIGGPPSQS 73 (331)
T ss_dssp ------GSCCCSEEECCCCGGG
T ss_pred ------hCCcccEEEecCCCCC
Confidence 2346899999888754
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.52 E-value=0.011 Score=50.44 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=65.4
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||..|+|. |..+..+++. +..+|+++|.++..++.+++. +.. ..+...+ ..+. +....
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~-~~~~----~~~~~-- 253 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKT-QDPV----AAIKE-- 253 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTT-SCHH----HHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCc-cCHH----HHHHH--
Confidence 67899999999875 6666666664 655899999999998888653 321 1111111 1110 00001
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
. ..+.+|+|+..... ...++.+.++|+++|.+++.+..
T Consensus 254 ----------~-~~gg~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 254 ----------I-TDGGVNFALESTGS---PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp ----------H-TTSCEEEEEECSCC---HHHHHHHHHTEEEEEEEEECCCC
T ss_pred ----------h-cCCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEeCCC
Confidence 1 12379999975432 35678889999999999986543
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.43 E-value=0.01 Score=51.23 Aligned_cols=106 Identities=21% Similarity=0.351 Sum_probs=66.0
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||.+|+|. |..+..+++. +..+|+++|.++..++.+++ .+. . .+...+.+.+. +.+..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~-~i~~~~~~~~~----~~~~~-- 248 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF---E-TIDLRNSAPLR----DQIDQ-- 248 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC---E-EEETTSSSCHH----HHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC---c-EEcCCCcchHH----HHHHH--
Confidence 67899999999876 6777777764 65589999999998887764 232 1 11111111000 00000
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-----------HHHHHHHHHHcccCCeEEEEecCC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-----------LPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
......+|+++....... ....++.+.++|+++|.+++.+..
T Consensus 249 ----------~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 249 ----------ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp ----------HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred ----------HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 112336999997554321 124678889999999999876543
No 312
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.23 E-value=0.015 Score=48.87 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=64.8
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.+++++||-.|+|. |..+..+++. +...++++|.++..++.+++. |.. ..+...+.... +....
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~---~~i~~~~~~~~-----~~~~~-- 223 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM---QTFNSSEMSAP-----QMQSV-- 223 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHH-----HHHHH--
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe---EEEeCCCCCHH-----HHHHh--
Confidence 67899999999876 4555556654 667889999999988888653 432 11221111100 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
+.....+|+++.... ....++.+.++++++|.+++.+..
T Consensus 224 ----------~~~~~g~d~v~d~~G---~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 224 ----------LRELRFNQLILETAG---VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp ----------HGGGCSSEEEEECSC---SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred ----------hcccCCccccccccc---ccchhhhhhheecCCeEEEEEecc
Confidence 113456788886432 246778888999999999986554
No 313
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.23 E-value=0.0085 Score=51.82 Aligned_cols=105 Identities=18% Similarity=0.198 Sum_probs=61.7
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++. |.. ..+. .....+. +.+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~-~~~~~~~----~~i---- 274 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVID-PTKENFV----EAV---- 274 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEEC-TTTSCHH----HHH----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEc-CCCCCHH----HHH----
Confidence 56789999999864 5566666664 555999999999998888653 321 1111 1111110 011
Q ss_pred hccccccccCCCCCCCeeEEEeccccc--cHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLN--PLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+.....+|+++....-. .....++.+.+.++++|.+++.+.
T Consensus 275 --------~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 275 --------LDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp --------HHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred --------HHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 1111344799999754433 122233333355599999998654
No 314
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.18 E-value=0.013 Score=48.69 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=54.2
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCE--EEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAM--FVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
.+.+++|+.||.|.++.-+.+.|... +.++|+++.+.+..+.|.. ...+...|...+... .+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-------~~~~~~~DI~~i~~~------~i--- 78 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-------GKIMYVGDVRSVTQK------HI--- 78 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-------TCEEEECCGGGCCHH------HH---
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-------CCceeCCChHHccHH------Hh---
Confidence 45689999999999999888877655 7999999998877766542 223455665544210 00
Q ss_pred cccccccCCCCCCCeeEEEecccccc
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
.....+|+++..+|+..
T Consensus 79 ---------~~~~~~Dll~ggpPCQ~ 95 (295)
T 2qrv_A 79 ---------QEWGPFDLVIGGSPCND 95 (295)
T ss_dssp ---------HHTCCCSEEEECCCCGG
T ss_pred ---------cccCCcCEEEecCCCcc
Confidence 01246899999887643
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.13 E-value=0.0044 Score=52.49 Aligned_cols=101 Identities=20% Similarity=0.218 Sum_probs=64.2
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++. +.. ..+...+. .+. +.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~-~~~----~~----- 226 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNG-DIV----EQ----- 226 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGS-CHH----HH-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCc-CHH----HH-----
Confidence 67899999999865 6666667765 545899999999888888653 322 11111111 110 00
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+........+|+++..... ...++.+.++|+++|.++..+
T Consensus 227 -------v~~~t~g~g~D~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 227 -------ILKATDGKGVDKVVIAGGD---VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp -------HHHHTTTCCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECC
T ss_pred -------HHHHcCCCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEec
Confidence 0111134479999964432 246778888999999998754
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.10 E-value=0.025 Score=48.30 Aligned_cols=104 Identities=22% Similarity=0.277 Sum_probs=64.9
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++. |.. ..+...+ ..+. +....
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~-~~~~----~~i~~-- 245 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSA-GDVV----EAIAG-- 245 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTS-SCHH----HHHHS--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCC-cCHH----HHHHh--
Confidence 67899999999865 5666666664 555999999999988887653 332 1111111 1110 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
...+ ..+.+|+++.... ....++.+.++|+++|.+++.+.
T Consensus 246 -------~~~~-~~gg~Dvvid~~G---~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 246 -------PVGL-VPGGVDVVIECAG---VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp -------TTSS-STTCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred -------hhhc-cCCCCCEEEECCC---CHHHHHHHHHHhccCCEEEEEec
Confidence 0001 1237999997543 24678888999999999998644
No 317
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.98 E-value=0.021 Score=49.64 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=41.4
Q ss_pred cCCCcEEEEccCCCHHHHHHH-Hh-C-CCEEEEEeCChHHHHHHHHHHHh
Q 047371 57 KGGELFLDYGTGSGILGIAAI-KF-G-AAMFVGVDIDPQVIKSAHQNAAL 103 (222)
Q Consensus 57 ~~~~~vLD~G~G~G~~~~~la-~~-~-~~~v~gvD~s~~~l~~a~~~~~~ 103 (222)
+++..++|+||+.|.++..++ +. + .++|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 578899999999999999877 43 3 37999999999999999999986
No 318
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.93 E-value=0.047 Score=46.87 Aligned_cols=105 Identities=18% Similarity=0.367 Sum_probs=65.6
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++ .|. . .+...+.+.+. +.+..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~-~i~~~~~~~~~----~~v~~-- 248 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF---E-IADLSLDTPLH----EQIAA-- 248 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---E-EEETTSSSCHH----HHHHH--
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC---c-EEccCCcchHH----HHHHH--
Confidence 67899999999865 6677777764 55589999999999888864 232 1 11111111010 00000
Q ss_pred hccccccccCCCCCCCeeEEEecccccc------------HHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP------------LPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~------------~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
......+|+|+....... ....++.+.++|+++|.+++.+.
T Consensus 249 ----------~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 249 ----------LLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp ----------HHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred ----------HhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 112346999997554321 12467888999999999988654
No 319
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.93 E-value=0.031 Score=47.69 Aligned_cols=102 Identities=19% Similarity=0.289 Sum_probs=64.5
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecC-Ccccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVP-DRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~ 132 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++ .|.. . .+...+ ...+ .+.....
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~-vi~~~~~~~~~----~~~i~~~ 259 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN--E-FVNPKDHDKPI----QEVIVDL 259 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC--E-EECGGGCSSCH----HHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc--E-EEccccCchhH----HHHHHHh
Confidence 56899999999864 5666666664 65589999999998887764 3432 1 111110 0111 0111111
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCC-eEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPG-AVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 184 (222)
..+.+|+++.... ....++.+.++|++| |.+++.+.
T Consensus 260 -------------~~gg~D~vid~~g---~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 260 -------------TDGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp -------------TTSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred -------------cCCCCCEEEECCC---CHHHHHHHHHHhhccCCEEEEEcc
Confidence 2237999997543 245788899999997 99988544
No 320
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.92 E-value=0.006 Score=51.59 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=54.0
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCC--CEE-EEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGA--AMF-VGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~--~~v-~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
...+++|++||.|.++.-+.+.+. ..+ .++|+++.+.+..+.|.... ....|...+.. ..+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~--------~~~~DI~~~~~------~~i-- 72 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE--------VQVKNLDSISI------KQI-- 72 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC--------CBCCCTTTCCH------HHH--
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC--------cccCChhhcCH------HHh--
Confidence 355899999999999998887763 567 79999999998888875321 33444443321 001
Q ss_pred ccccccccCCCCCCCeeEEEeccccccH
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPL 162 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~ 162 (222)
+...+|+++..+|+...
T Consensus 73 -----------~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 73 -----------ESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp -----------HHTCCCEEEECCCCTTC
T ss_pred -----------ccCCCCEEEecCCccCc
Confidence 12268999999886554
No 321
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.90 E-value=0.054 Score=45.28 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=63.3
Q ss_pred hcCCCcEEEEccCC--CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS--GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~--G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|++. |..+..+++....+|++++.++..++.+.+. .+.. ..+...+ ..+. +....
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~-~~~~----~~~~~-- 213 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFD---GAIDYKN-EDLA----AGLKR-- 213 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCS---EEEETTT-SCHH----HHHHH--
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCC---EEEECCC-HHHH----HHHHH--
Confidence 67899999999833 5666666654335999999999888777332 2321 1121111 1110 00111
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ..+.+|+++.+..- ..++.+.+.|+++|.+++.+.
T Consensus 214 ----------~-~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 214 ----------E-CPKGIDVFFDNVGG----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp ----------H-CTTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred ----------h-cCCCceEEEECCCc----chHHHHHHHHhhCCEEEEEee
Confidence 1 13479999976642 467888899999999998544
No 322
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.86 E-value=0.017 Score=48.66 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=63.8
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++.-..+|+++|.++..++.+++ .|.. .+ + .+.+.+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~v-~--~~~~~~------------- 231 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK--HF-Y--TDPKQC------------- 231 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS--EE-E--SSGGGC-------------
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC--ee-c--CCHHHH-------------
Confidence 67899999999865 666666776534589999999998887765 3432 22 2 221111
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
...+|+++....-. ..++.+.++|+++|.+++.+...
T Consensus 232 ------------~~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 232 ------------KEELDFIISTIPTH---YDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp ------------CSCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECCCCC
T ss_pred ------------hcCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEECCCC
Confidence 12799999754332 24667888999999999865543
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.82 E-value=0.03 Score=47.39 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=64.1
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecC--Cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVP--DRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~ 131 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++ .+.. . .+.... ...+ ...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~-vi~~~~~~~~~~-------~~~ 234 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD--L-VLQISKESPQEI-------ARK 234 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS--E-EEECSSCCHHHH-------HHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC--E-EEcCcccccchH-------HHH
Confidence 67899999999865 6666666664 54589999999988888764 2332 1 111110 0000 000
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+ ..... +.+|+++..... ...++.+.++|+++|.+++.+.
T Consensus 235 i---------~~~~~-~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 235 V---------EGQLG-CKPEVTIECTGA---EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp H---------HHHHT-SCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECSC
T ss_pred H---------HHHhC-CCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEec
Confidence 0 00112 569999975532 3467788899999999998654
No 324
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.79 E-value=0.026 Score=47.85 Aligned_cols=106 Identities=21% Similarity=0.166 Sum_probs=65.9
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|. |..+..+++. +...|+++|.++..++.+++. ... -+.+...+...- +....
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~-----~~~~~~~~~~~~-----~~~~~-- 243 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE-----VVTHKVERLSAE-----ESAKK-- 243 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT-----CEEEECCSCCHH-----HHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh-----cccccccccchH-----HHHHH--
Confidence 67899999999865 5666667765 554599999999999988865 211 122221110000 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+........+|+++....- ...++.+.++|+++|.+++.+.
T Consensus 244 -------v~~~t~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 244 -------IVESFGGIEPAVALECTGV---ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp -------HHHHTSSCCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECCC
T ss_pred -------HHHHhCCCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEcc
Confidence 0111134579999975432 3467888899999999998644
No 325
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.78 E-value=0.034 Score=46.62 Aligned_cols=101 Identities=14% Similarity=0.222 Sum_probs=65.7
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++.-..+|+++|.++..++.+++ .+.. ..+...+ ..+. ..+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~-~~~~-------~~~-- 226 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE---VAVNARD-TDPA-------AWL-- 226 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEETTT-SCHH-------HHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC---EEEeCCC-cCHH-------HHH--
Confidence 57899999999876 777777777534599999999998888765 2322 1122111 1110 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
.. ..+.+|+++.... ....++.+.++|+++|.+++.+..
T Consensus 227 -------~~--~~g~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 227 -------QK--EIGGAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp -------HH--HHSSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred -------HH--hCCCCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeCCC
Confidence 00 1236899986543 246788899999999999986543
No 326
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.77 E-value=0.05 Score=46.25 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=63.9
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC-cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD-RTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 132 (222)
+++|++||-+|+|. |..+..+++. +..+|+++|.++..++.+++ .+.. . .+...+. ..+. +....
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~-vi~~~~~~~~~~----~~i~~- 256 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT--E-CLNPKDYDKPIY----EVICE- 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS--E-EECGGGCSSCHH----HHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc--E-EEecccccchHH----HHHHH-
Confidence 56899999999765 5666666654 65589999999998888764 2432 1 1111110 0110 00011
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCC-eEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPG-AVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 184 (222)
. ..+.+|+++..... ...++.+.++|+++ |.+++.+.
T Consensus 257 -----------~-t~gg~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 257 -----------K-TNGGVDYAVECAGR---IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp -----------H-TTSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred -----------H-hCCCCCEEEECCCC---HHHHHHHHHHHhcCCCEEEEEcc
Confidence 1 12379999965432 35678889999999 99988654
No 327
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.76 E-value=0.0027 Score=66.69 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=50.3
Q ss_pred CCCcEEEEccCCCHHHHHHHH-hC-----CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccccc
Q 047371 58 GGELFLDYGTGSGILGIAAIK-FG-----AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~-~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
+..+||++|+|+|..+..+.. .+ ..+++.+|+++...+.|++.+.... +.....+.... .+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d-----i~~~~~d~~~~--------~~ 1306 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH-----VTQGQWDPANP--------AP 1306 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT-----EEEECCCSSCC--------CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc-----ccccccccccc--------cc
Confidence 467999999999976554332 21 3578999999888877777654322 11211111000 00
Q ss_pred chhccccccccCCCCCCCeeEEEecccccc---HHHHHHHHHHcccCCeEEEEec
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNP---LPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
. ....||+|++...++. +...+.+++++|||||++++..
T Consensus 1307 ~-------------~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1307 G-------------SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ------------------CCEEEEECC--------------------CCEEEEEE
T ss_pred C-------------CCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 0 2346999999877763 4567899999999999988854
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.75 E-value=0.0054 Score=52.27 Aligned_cols=101 Identities=14% Similarity=0.212 Sum_probs=64.2
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++....+|+++|.++..++.+++. +.. ..+. .+...+. +....
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~-~~~~~~~----~~v~~--- 251 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD---HGIN-RLEEDWV----ERVYA--- 251 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEE-TTTSCHH----HHHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC---EEEc-CCcccHH----HHHHH---
Confidence 66899999999775 6666666665345999999999988887652 332 1122 2111110 00011
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
......+|+++....- ..++.+.++|+++|.+++.+.
T Consensus 252 ---------~~~g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 252 ---------LTGDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp ---------HHTTCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECC
T ss_pred ---------HhCCCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEec
Confidence 1134479999976542 346677889999999998644
No 329
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.72 E-value=0.0067 Score=51.42 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=52.4
Q ss_pred CcEEEEccCCCHHHHHHHHhCC--CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 60 ELFLDYGTGSGILGIAAIKFGA--AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
.+++|++||.|.++.-+.+.+. ..+.++|+++.+.+..+.|... ..+...|...+.. ..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-------~~~~~~DI~~~~~------~~~----- 65 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-------TNLLNRNIQQLTP------QVI----- 65 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-------SCEECCCGGGCCH------HHH-----
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-------CceeccccccCCH------HHh-----
Confidence 3699999999999988877764 6689999999988888776532 2234445443321 000
Q ss_pred cccccCCCCCCCeeEEEecccccc
Q 047371 138 SHEIRGISETEEYDVVIANILLNP 161 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~ 161 (222)
+...+|+++..+|+..
T Consensus 66 --------~~~~~D~l~ggpPCQ~ 81 (333)
T 4h0n_A 66 --------KKWNVDTILMSPPCQP 81 (333)
T ss_dssp --------HHTTCCEEEECCCCCC
T ss_pred --------ccCCCCEEEecCCCcc
Confidence 1235899999888754
No 330
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.57 E-value=0.007 Score=50.64 Aligned_cols=101 Identities=19% Similarity=0.160 Sum_probs=62.7
Q ss_pred hcCCCcEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ | .|..+..+++....+|++++.++..++.+++. +.. ..+...+ ..+. +..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~-~~~~----~~~---- 201 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GAW---ETIDYSH-EDVA----KRV---- 201 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEEETTT-SCHH----HHH----
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEeCCC-ccHH----HHH----
Confidence 567899999883 3 25666666654235899999999988888652 321 1122111 1110 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
........+|+++.+... ..+..+.++|+++|.+++.+.
T Consensus 202 --------~~~~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 202 --------LELTDGKKCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp --------HHHTTTCCEEEEEESSCG----GGHHHHHTTEEEEEEEEECCC
T ss_pred --------HHHhCCCCceEEEECCCh----HHHHHHHHHhcCCCEEEEEec
Confidence 111134579999976543 456778889999999998644
No 331
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.55 E-value=0.073 Score=45.21 Aligned_cols=96 Identities=9% Similarity=0.152 Sum_probs=63.2
Q ss_pred CCCcEEEEc-cCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYG-TGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G-~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+|++||-.| +|. |..+..+++. +..+|+++|.++..++.+++ .|.. .+ +... +.+. +.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad--~v-i~~~--~~~~----~~------ 231 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH--HV-IDHS--KPLA----AE------ 231 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS--EE-ECTT--SCHH----HH------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC--EE-EeCC--CCHH----HH------
Confidence 678999998 554 7777788875 66899999999988888765 3432 11 1111 1110 00
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+..+ ..+.+|+++.... -...++.+.++|+++|.+++.
T Consensus 232 ------v~~~-~~~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 232 ------VAAL-GLGAPAFVFSTTH---TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ------HHTT-CSCCEEEEEECSC---HHHHHHHHHHHSCTTCEEEEC
T ss_pred ------HHHh-cCCCceEEEECCC---chhhHHHHHHHhcCCCEEEEE
Confidence 1111 3457999996442 235778889999999999885
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.53 E-value=0.072 Score=45.23 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=63.6
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC-cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD-RTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 132 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++. +.. .+ +...+. ..+. +....
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~v-i~~~~~~~~~~----~~v~~- 255 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT--EC-INPQDFSKPIQ----EVLIE- 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS--EE-ECGGGCSSCHH----HHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc--eE-eccccccccHH----HHHHH-
Confidence 56899999999764 5566666654 655899999999988888642 322 11 111110 0110 00011
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCC-eEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPG-AVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 184 (222)
. ..+.+|+++..... ...++.+.++|+++ |.+++.+.
T Consensus 256 -----------~-~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 256 -----------M-TDGGVDYSFECIGN---VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp -----------H-TTSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred -----------H-hCCCCCEEEECCCc---HHHHHHHHHhhccCCcEEEEEec
Confidence 1 12379999975432 35678889999999 99988654
No 333
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.52 E-value=0.0089 Score=50.15 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=62.4
Q ss_pred hcCCCcEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ | .|..+..+++....+|++++.++..++.+++. +.. ..+...+ ..+. +..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~~~~~~~-~~~~----~~~---- 209 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GAE---YLINASK-EDIL----RQV---- 209 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS---EEEETTT-SCHH----HHH----
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEEeCCC-chHH----HHH----
Confidence 568899999984 3 35666666665346899999999888877652 321 1121111 1110 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
........+|+++.+..- ..++.+.++|+++|.+++.+
T Consensus 210 --------~~~~~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 210 --------LKFTNGKGVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp --------HHHTTTSCEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred --------HHHhCCCCceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 111134579999976643 45677888999999999854
No 334
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.52 E-value=0.009 Score=50.36 Aligned_cols=102 Identities=17% Similarity=0.233 Sum_probs=66.3
Q ss_pred hhcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 55 LIKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 55 ~~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++++++||-.|+|. |..+..+++. +..+|+++|.+++.++.+++. |.. .+ +.. +. .+. +.....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----Ga~--~~-i~~-~~-~~~----~~v~~~ 234 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----GAD--AA-VKS-GA-GAA----DAIREL 234 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----TCS--EE-EEC-ST-THH----HHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CCC--EE-EcC-CC-cHH----HHHHHH
Confidence 367899999999865 6666667664 568999999999998888652 432 11 111 11 110 111111
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.....+|+++....- ...++.+.++|+++|.+++.+.
T Consensus 235 ------------t~g~g~d~v~d~~G~---~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 235 ------------TGGQGATAVFDFVGA---QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp ------------HGGGCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred ------------hCCCCCeEEEECCCC---HHHHHHHHHHHhcCCEEEEECC
Confidence 123469999975432 3578888999999999998654
No 335
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.43 E-value=0.024 Score=47.58 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=63.5
Q ss_pred hcCCCcEEEEccCCC-HHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGSG-ILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G-~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++|++||-.|+|.+ .++..+++ .+..+|+++|.++..++.+++. +.. ..+...+.+.. +..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~---~~i~~~~~~~~-----~~v---- 224 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GAD---VTINSGDVNPV-----DEI---- 224 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCS---EEEEC-CCCHH-----HHH----
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCe---EEEeCCCCCHH-----HHh----
Confidence 678999999999874 44544444 5668999999999888777653 321 12222221111 001
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
........+|.++.... -...+....++++++|.+++.+.
T Consensus 225 --------~~~t~g~g~d~~~~~~~---~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 225 --------KKITGGLGVQSAIVCAV---ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp --------HHHTTSSCEEEEEECCS---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred --------hhhcCCCCceEEEEecc---CcchhheeheeecCCceEEEEec
Confidence 11113446787775432 24667888899999999988543
No 336
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.42 E-value=0.024 Score=50.46 Aligned_cols=42 Identities=14% Similarity=0.185 Sum_probs=36.4
Q ss_pred CcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHH
Q 047371 60 ELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~ 101 (222)
.+++|++||.|.++.-+.+.|...+.++|+++.+.+..+.|.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 479999999999999888778777999999998887777664
No 337
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.39 E-value=0.0057 Score=47.24 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=59.7
Q ss_pred hcCCCcEEEEccCC--CHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGS--GILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~--G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
++++++||..|++. |.....++. .+ .+|+++|.++..++.+++ .+.. ..+...+. .. ...+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~----~g~~---~~~d~~~~-~~-------~~~~ 99 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSR----LGVE---YVGDSRSV-DF-------ADEI 99 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHT----TCCS---EEEETTCS-TH-------HHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH----cCCC---EEeeCCcH-HH-------HHHH
Confidence 56789999998533 444444443 45 589999999987766643 2321 11211111 10 0000
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
......+.+|+++.+.. ...++.+.+.|+++|.++..+.
T Consensus 100 ---------~~~~~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 100 ---------LELTDGYGVDVVLNSLA----GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp ---------HHHTTTCCEEEEEECCC----THHHHHHHHTEEEEEEEEECSC
T ss_pred ---------HHHhCCCCCeEEEECCc----hHHHHHHHHHhccCCEEEEEcC
Confidence 00112346999997653 2567888899999999988543
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.30 E-value=0.073 Score=45.26 Aligned_cols=102 Identities=14% Similarity=0.240 Sum_probs=63.6
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC-cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD-RTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 132 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++ .+.. .+ +...+. ..+. +.....
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~v-i~~~~~~~~~~----~~~~~~ 258 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT--DF-VNPNDHSEPIS----QVLSKM 258 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC--EE-ECGGGCSSCHH----HHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc--eE-EeccccchhHH----HHHHHH
Confidence 56899999999764 5566666664 54489999999998888764 2332 11 111110 0110 000011
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCC-eEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPG-AVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 184 (222)
..+.+|+++..... ...++.+.++|+++ |.+++.+.
T Consensus 259 -------------~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 259 -------------TNGGVDFSLECVGN---VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp -------------HTSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred -------------hCCCCCEEEECCCC---HHHHHHHHHHhhcCCcEEEEEcC
Confidence 12379999975432 35678889999999 99988654
No 339
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.22 E-value=0.018 Score=48.66 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=63.2
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++.-..+|+++|.++..++.+++ .+.. ..+...+...+. ......
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~----~~i~~~-- 232 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEE----SSIIER-- 232 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCH----HHHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHH----HHHHHH--
Confidence 67899999999864 556666666433569999999998888764 2332 112111101110 000000
Q ss_pred ccccccccCCCC---CCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISE---TEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~---~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.. .+.+|+++..... ...++.+.++|+++|.++..+.
T Consensus 233 ----------~~~~~g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 233 ----------IRSAIGDLPNVTIDCSGN---EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp ----------HHHHSSSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECSC
T ss_pred ----------hccccCCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEec
Confidence 01 2469999975533 3467788899999999998643
No 340
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.22 E-value=0.098 Score=43.61 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=61.4
Q ss_pred hcCCCcEEEEccC--CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTG--SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G--~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++++||..|++ .|..+..+++....+|+++|.++..++.+++. +.. ..+...+...+. .....
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~d~~~~~~~~----~~~~~-- 209 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFD---AAFNYKTVNSLE----EALKK-- 209 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS---EEEETTSCSCHH----HHHHH--
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCc---EEEecCCHHHHH----HHHHH--
Confidence 5678999999983 35555555544335899999999888777332 321 112211101110 00001
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ..+.+|+++.+... ..++.+.++|+++|.+++.+.
T Consensus 210 ----------~-~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 210 ----------A-SPDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp ----------H-CTTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred ----------H-hCCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEec
Confidence 1 12579999987653 357788899999999988543
No 341
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.18 E-value=0.012 Score=50.32 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=63.6
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecC--Cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVP--DRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~ 131 (222)
+++|++||-.|+|. |..+..+++. +..+|++++.++..++.+++ .+.. .+ +.... ...+. +..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~v-i~~~~~~~~~~~----~~v-- 259 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD--LT-LNRRETSVEERR----KAI-- 259 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS--EE-EETTTSCHHHHH----HHH--
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc--EE-EeccccCcchHH----HHH--
Confidence 56789999999664 5666666665 43599999999998888764 2322 11 11110 00000 000
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
........+|+++..... ...++.+.++|+++|.++..+..
T Consensus 260 ----------~~~~~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 260 ----------MDITHGRGADFILEATGD---SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp ----------HHHTTTSCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCCC
T ss_pred ----------HHHhCCCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEEecC
Confidence 011123469999976543 24567788899999999886543
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.14 E-value=0.1 Score=44.38 Aligned_cols=102 Identities=21% Similarity=0.244 Sum_probs=63.2
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC-cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD-RTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 132 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++ .+.. . .+...+. ..+. +....
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~-vi~~~~~~~~~~----~~~~~- 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT--E-CVNPQDYKKPIQ----EVLTE- 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS--E-EECGGGCSSCHH----HHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc--e-EecccccchhHH----HHHHH-
Confidence 56899999999765 5566666664 54489999999998888764 2322 1 1111110 0110 00011
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCC-eEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPG-AVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 184 (222)
. ..+.+|+++..... ...++.+.++|+++ |.+++.+.
T Consensus 257 -----------~-~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 257 -----------M-SNGGVDFSFEVIGR---LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp -----------H-TTSCBSEEEECSCC---HHHHHHHHHHBCTTTCEEEECSC
T ss_pred -----------H-hCCCCcEEEECCCC---HHHHHHHHHHhhcCCcEEEEecc
Confidence 1 12379999975432 35678888999999 99988543
No 343
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.11 E-value=0.016 Score=49.50 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=62.4
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++.-..+|+++|.++..++.+++ .+.. .+ +...+ ..+ ..
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~--~v-i~~~~-~~~-------~~---- 252 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGAD--EV-VNSRN-ADE-------MA---- 252 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS--EE-EETTC-HHH-------HH----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc--EE-ecccc-HHH-------HH----
Confidence 67899999999875 566666666534579999999998888865 2322 11 11111 000 00
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
.+ .+.+|+++...... ..++.+.++|+++|.++..+..
T Consensus 253 --------~~--~~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 253 --------AH--LKSFDFILNTVAAP---HNLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp --------TT--TTCEEEEEECCSSC---CCHHHHHTTEEEEEEEEECCCC
T ss_pred --------Hh--hcCCCEEEECCCCH---HHHHHHHHHhccCCEEEEeccC
Confidence 11 15799999754432 2356678899999999886543
No 344
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.08 E-value=0.0085 Score=50.46 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=61.9
Q ss_pred hcCCCcEEEEccCC--CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS--GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~--G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|+ |..+..+++....+|+++|.++..++.+++. +.. ..+...+ ..+. +..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~-~~~~----~~~---- 205 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA---YVIDTST-APLY----ETV---- 205 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEETTT-SCHH----HHH----
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc---EEEeCCc-ccHH----HHH----
Confidence 67899999999874 5666666654235899999999888888752 321 1121111 1110 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+.....+|+++.+.... ......++|+++|.+++.+.
T Consensus 206 --------~~~~~~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 206 --------MELTNGIGADAAIDSIGGP----DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp --------HHHTTTSCEEEEEESSCHH----HHHHHHHTEEEEEEEEECCC
T ss_pred --------HHHhCCCCCcEEEECCCCh----hHHHHHHHhcCCCEEEEEee
Confidence 1111345799999765432 22334589999999998654
No 345
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.03 E-value=0.087 Score=44.80 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=63.3
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC-cccccccccccccc
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD-RTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 132 (222)
+++|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++ .+.. . .+...+. ..+. +.....
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~-vi~~~~~~~~~~----~~v~~~ 261 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT--D-CLNPRELDKPVQ----DVITEL 261 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS--E-EECGGGCSSCHH----HHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc--E-EEccccccchHH----HHHHHH
Confidence 56899999999764 5666666664 54589999999998888764 2332 1 1111110 0110 000000
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCC-eEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPG-AVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 184 (222)
..+.+|+++..... ...++.+.++|+++ |.+++.+.
T Consensus 262 -------------~~~g~Dvvid~~G~---~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 262 -------------TAGGVDYSLDCAGT---AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp -------------HTSCBSEEEESSCC---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred -------------hCCCccEEEECCCC---HHHHHHHHHHhhcCCCEEEEECC
Confidence 12379999965432 35678889999999 99988544
No 346
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.85 E-value=0.74 Score=39.29 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=78.2
Q ss_pred CCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 58 GGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
.+.+||.++.+.|.++..++..+ ++.+.-|-..-...+.|+..+++..+.+++...-. .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~----------------- 96 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-D----------------- 96 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-C-----------------
T ss_pred CCCCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-c-----------------
Confidence 45689999999999998876543 34443355555566788888888744455543211 0
Q ss_pred cccccCCCCCCCeeEEEeccccc--cHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhhhhc
Q 047371 138 SHEIRGISETEEYDVVIANILLN--PLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLED 202 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 202 (222)
....+|+++...|-. .+...+..+...|++|+.+++.+-...-...+.+.++..+..
T Consensus 97 --------~~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~~~~ 155 (375)
T 4dcm_A 97 --------YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP 155 (375)
T ss_dssp --------CCSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHHTCC
T ss_pred --------cccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhhcCc
Confidence 356799999876643 245578899999999999988654444445666666665433
No 347
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.76 E-value=0.032 Score=47.01 Aligned_cols=100 Identities=21% Similarity=0.274 Sum_probs=61.7
Q ss_pred CCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 58 GGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++. +.. .+ +. .....+. +..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~--~~-~~-~~~~~~~----~~v------ 228 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD--YV-IN-PFEEDVV----KEV------ 228 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS--EE-EC-TTTSCHH----HHH------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC--EE-EC-CCCcCHH----HHH------
Confidence 789999999854 5555566654 544899999999888877642 321 11 11 1111110 000
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
........+|+++..... ...++.+.+.|+++|.++..+.
T Consensus 229 ------~~~~~g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 229 ------MDITDGNGVDVFLEFSGA---PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp ------HHHTTTSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECCC
T ss_pred ------HHHcCCCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEcc
Confidence 011123469999976542 3567888899999999988543
No 348
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.74 E-value=0.067 Score=44.43 Aligned_cols=92 Identities=13% Similarity=0.099 Sum_probs=59.2
Q ss_pred cEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcccc
Q 047371 61 LFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSS 138 (222)
Q Consensus 61 ~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (222)
+||-.|+ | .|..+..+++.-..+|++++.++..++.+++. |.. . .+...+... .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~-vi~~~~~~~--------~--------- 204 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN--R-ILSRDEFAE--------S--------- 204 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS--E-EEEGGGSSC--------C---------
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC--E-EEecCCHHH--------H---------
Confidence 4998887 3 36777777775335899999999988888652 322 1 121111100 0
Q ss_pred ccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 139 HEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 139 ~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+ ..+.+|+++.... ...++.+.++|+++|.++..+.
T Consensus 205 ---~~~-~~~~~d~v~d~~g----~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 205 ---RPL-EKQLWAGAIDTVG----DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ---CSS-CCCCEEEEEESSC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred ---Hhh-cCCCccEEEECCC----cHHHHHHHHHHhcCCEEEEEec
Confidence 111 2357999886543 2378889999999999998644
No 349
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.71 E-value=0.073 Score=44.61 Aligned_cols=102 Identities=13% Similarity=0.115 Sum_probs=62.4
Q ss_pred hcCCCcEEEEccC--CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTG--SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G--~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|++ .|..+..+++....+|++++.++..++.+++. .+.. ..+...+...+. .....
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~~d~~~~~~~~----~~~~~-- 220 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---DAFNYKEESDLT----AALKR-- 220 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---EEEETTSCSCSH----HHHHH--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---eEEecCCHHHHH----HHHHH--
Confidence 5688999999973 35566655554335899999999888777632 2321 112111111110 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ..+.+|+++.+... ..++.+.++|+++|.+++.+.
T Consensus 221 ----------~-~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 221 ----------C-FPNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp ----------H-CTTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred ----------H-hCCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEEcc
Confidence 1 12569999976642 467888899999999988543
No 350
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.69 E-value=0.27 Score=35.54 Aligned_cols=96 Identities=13% Similarity=0.012 Sum_probs=56.2
Q ss_pred CCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 59 GELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 59 ~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
..+|+-+|+|. |. ++..|.+.+ .+|+++|.++..++.++. .+ +.+..+|...... +...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~~~~~~-----l~~a---- 67 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD-IPLVVIETSRTRVDELRE----RG-----VRAVLGNAANEEI-----MQLA---- 67 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHH----TT-----CEEEESCTTSHHH-----HHHT----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHH----cC-----CCEEECCCCCHHH-----HHhc----
Confidence 35788888865 33 233344444 589999999998877764 23 3456666543210 0000
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
....+|++++..+-+.....+-...+.+.|+..++..
T Consensus 68 ---------~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 68 ---------HLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp ---------TGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ---------CcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEE
Confidence 2346899987655443333344456667788776653
No 351
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.65 E-value=0.21 Score=42.04 Aligned_cols=101 Identities=15% Similarity=0.198 Sum_probs=61.6
Q ss_pred hcCC--CcEEEEccCC--CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccc
Q 047371 56 IKGG--ELFLDYGTGS--GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 56 ~~~~--~~vLD~G~G~--G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
++++ ++||-.|++. |..+..+++. +..+|+++|.++..++.+++. .+.. ..+...+ ..+. ....
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~d~~~-~~~~----~~~~ 224 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAINYKK-DNVA----EQLR 224 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEEETTT-SCHH----HHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEEecCc-hHHH----HHHH
Confidence 6778 9999999733 4555555544 544999999998877776542 2321 1121111 1110 0001
Q ss_pred cchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. .... .+|+++.+.. ...++.+.++|+++|.+++.+.
T Consensus 225 ~------------~~~~-~~d~vi~~~G----~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 225 E------------SCPA-GVDVYFDNVG----GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp H------------HCTT-CEEEEEESCC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred H------------hcCC-CCCEEEECCC----HHHHHHHHHHhccCcEEEEECC
Confidence 1 1122 7999998765 2667888999999999988543
No 352
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.61 E-value=0.15 Score=42.75 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=62.6
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++++++||-.|+|. |..+..+++.-..+|+++|.++..++.+++ .+.. .+ +...+ ..+. ..+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~~-~d~~~-~~~~-------~~~-- 224 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD--LV-VNPLK-EDAA-------KFM-- 224 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS--EE-ECTTT-SCHH-------HHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC--EE-ecCCC-ccHH-------HHH--
Confidence 67899999999864 555666665433599999999998887764 2322 11 11111 1110 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
... . +.+|+++.+... ...++.+.++|+++|.++..+.
T Consensus 225 -------~~~-~-~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 225 -------KEK-V-GGVHAAVVTAVS---KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp -------HHH-H-SSEEEEEESSCC---HHHHHHHHHHEEEEEEEEECCC
T ss_pred -------HHH-h-CCCCEEEECCCC---HHHHHHHHHHhhcCCEEEEecc
Confidence 000 1 469999976543 3567888899999999988544
No 353
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.49 E-value=0.11 Score=43.76 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=62.3
Q ss_pred hcCCCcEEEEccC--CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTG--SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G--~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++++||..|++ .|..+..+++....+|+++|.++..++.+++ .+.. ..+...+...+. ......
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---~~~d~~~~~~~~----~~~~~~- 234 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---VFIDFTKEKDIV----GAVLKA- 234 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---EEEETTTCSCHH----HHHHHH-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---eEEecCccHhHH----HHHHHH-
Confidence 5688999999983 3555555555433589999999888776654 2321 112111111110 000111
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
... .+|+++.+... ...++.+.+.|+++|.++..+.
T Consensus 235 -----------~~~-~~D~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 235 -----------TDG-GAHGVINVSVS---EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp -----------HTS-CEEEEEECSSC---HHHHHHHTTSEEEEEEEEECCC
T ss_pred -----------hCC-CCCEEEECCCc---HHHHHHHHHHHhcCCEEEEEeC
Confidence 122 69999987643 3577888999999999988544
No 354
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.42 E-value=0.022 Score=47.97 Aligned_cols=101 Identities=13% Similarity=0.207 Sum_probs=62.5
Q ss_pred hcCCCcEEEEcc--CCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT--GSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++++||-.|+ |.|..+..+++....+|++++.++..++.+++ .+.. . .+...+. .+. .....
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga~--~-~~d~~~~-~~~----~~~~~-- 229 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGAD--E-TVNYTHP-DWP----KEVRR-- 229 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCS--E-EEETTST-THH----HHHHH--
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC--E-EEcCCcc-cHH----HHHHH--
Confidence 567899999998 34666666665433589999999998888764 2321 1 1211111 110 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
......+|+++.+.. . ..++.+.++|+++|.++..+.
T Consensus 230 ----------~~~~~~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 230 ----------LTGGKGADKVVDHTG-A---LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp ----------HTTTTCEEEEEESSC-S---SSHHHHHHHEEEEEEEEESSC
T ss_pred ----------HhCCCCceEEEECCC-H---HHHHHHHHhhccCCEEEEEec
Confidence 112347999998765 2 346777889999999988543
No 355
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.41 E-value=0.21 Score=42.23 Aligned_cols=100 Identities=13% Similarity=0.083 Sum_probs=63.1
Q ss_pred hcCCCcEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ | .|..+..+++....+|++++.++..++.+++ .+.. ..+. .+...+. +....
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~-~~~~~~~----~~~~~-- 226 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---RPIN-YKTEPVG----TVLKQ-- 226 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEE-TTTSCHH----HHHHH--
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---EEEe-cCChhHH----HHHHH--
Confidence 578999999993 4 3667776766533589999999988887765 2322 1111 1111110 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ....+|+++.+... ..++.+.++|+++|.+++.+.
T Consensus 227 ----------~-~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 227 ----------E-YPEGVDVVYESVGG----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp ----------H-CTTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECCC
T ss_pred ----------h-cCCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEeC
Confidence 0 12469999976542 567888899999999988544
No 356
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.31 E-value=0.2 Score=42.01 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=59.7
Q ss_pred CCCcEEEEc-cCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 58 GGELFLDYG-TGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G-~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+|++||-.| +|. |..+..+++.-..+|++++.++..++.+++. +.. .+ +. .. +.+. +....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~v-i~-~~-~~~~----~~~~~---- 212 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD--IV-LN-HK-ESLL----NQFKT---- 212 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS--EE-EC-TT-SCHH----HHHHH----
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc--EE-EE-CC-ccHH----HHHHH----
Confidence 789999984 443 5666666665335999999999988888762 321 11 11 11 1110 00011
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
. ..+.+|+++.... -...++.+.++|+++|.++..
T Consensus 213 --------~-~~~g~Dvv~d~~g---~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 213 --------Q-GIELVDYVFCTFN---TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp --------H-TCCCEEEEEESSC---HHHHHHHHHHHEEEEEEEEES
T ss_pred --------h-CCCCccEEEECCC---chHHHHHHHHHhccCCEEEEE
Confidence 1 3456999997443 245678888999999999763
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.31 E-value=0.02 Score=47.71 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=60.9
Q ss_pred hcCCCcEEEEccC--CCHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTG--SGILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G--~G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
++++++||-.|++ .|..+..+++ .+ .+|+++|.++..++.+++. +.. ..+...+. .+. ..+
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~-~~~-------~~~ 201 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA----GAW---QVINYREE-DLV-------ERL 201 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH----TCS---EEEETTTS-CHH-------HHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc----CCC---EEEECCCc-cHH-------HHH
Confidence 5678999999843 3455554444 45 5899999999888877652 321 11211111 110 000
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
........+|+++.+.. ...++.+.++|+++|.+++.+.
T Consensus 202 ---------~~~~~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 202 ---------KEITGGKKVRVVYDSVG----RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp ---------HHHTTTCCEEEEEECSC----GGGHHHHHHTEEEEEEEEECCC
T ss_pred ---------HHHhCCCCceEEEECCc----hHHHHHHHHHhcCCCEEEEEec
Confidence 00112346999998765 3456788889999999988543
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.27 E-value=0.092 Score=44.12 Aligned_cols=102 Identities=16% Similarity=0.262 Sum_probs=62.9
Q ss_pred hcCCCcEEEEccCCC--HHHHHHHH-h-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccccc
Q 047371 56 IKGGELFLDYGTGSG--ILGIAAIK-F-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~~vLD~G~G~G--~~~~~la~-~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
++++++||-.|+|+| ..+..+++ . + .+|+++|.++..++.+++. +.. ..+...+.+.. +....
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~-----~~~~~ 234 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRA----GAD---YVINASMQDPL-----AEIRR 234 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHH-----HHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHh----CCC---EEecCCCccHH-----HHHHH
Confidence 678999999999743 44444444 4 5 5899999999888877542 321 11221111100 00011
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
. ...+.+|+++.+... ...++.+.++|+++|.+++.+..
T Consensus 235 ~------------~~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 235 I------------TESKGVDAVIDLNNS---EKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp H------------TTTSCEEEEEESCCC---HHHHTTGGGGEEEEEEEEECCSS
T ss_pred H------------hcCCCceEEEECCCC---HHHHHHHHHHHhcCCEEEEECCC
Confidence 1 111479999976543 34678888999999999886543
No 359
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.26 E-value=0.2 Score=41.77 Aligned_cols=68 Identities=6% Similarity=-0.143 Sum_probs=42.4
Q ss_pred CCCeeEEEeccc------cccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcceecc-cCCceEeeccc
Q 047371 147 TEEYDVVIANIL------LNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDILVSE-KDDWRCVSGTK 218 (222)
Q Consensus 147 ~~~~D~v~~~~~------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~w~~~~~~k 218 (222)
..++|+|+.++. --+..++++.++++++|||.+...+. ...++..+... |......- .+.+..+.+++
T Consensus 184 ~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYta----ag~VRR~L~~aGF~V~k~~G~g~KReml~A~~ 259 (308)
T 3vyw_A 184 NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSS----SLSVRKSLLTLGFKVGSSREIGRKRKGTVASL 259 (308)
T ss_dssp SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCC----CHHHHHHHHHTTCEEEEEECC---CEEEEEES
T ss_pred ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeC----cHHHHHHHHHCCCEEEecCCCCCCCceeEEec
Confidence 457999998652 11346799999999999999887432 24566666654 65554432 33444455544
No 360
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.19 E-value=0.028 Score=47.35 Aligned_cols=98 Identities=9% Similarity=0.106 Sum_probs=61.8
Q ss_pred CCCcEEEEccCC-CHHHHHHHHhC--CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGS-GILGIAAIKFG--AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~-G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+|++||-.|+|. |..+..+++.- ..+|+++|.++..++.+++. +.. .+ +...+.. +....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~v-i~~~~~~-------~~~~~~-- 233 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD--YV-SEMKDAE-------SLINKL-- 233 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS--EE-ECHHHHH-------HHHHHH--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC--EE-eccccch-------HHHHHh--
Confidence 799999999864 55666666542 36899999999988888652 321 11 1110000 000011
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.....+|+++..... ...++.+.++|+++|.++..+.
T Consensus 234 ----------~~g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 234 ----------TDGLGASIAIDLVGT---EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ----------HTTCCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECCC
T ss_pred ----------hcCCCccEEEECCCC---hHHHHHHHHHhhcCCEEEEeCC
Confidence 123379999975533 3467888899999999988543
No 361
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.99 E-value=0.043 Score=45.91 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=61.2
Q ss_pred hcCCCcEEEEcc--CCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT--GSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++++||-.|+ |.|..+..+++....+|+++|.++..++.+++. +.. ..+...+ ..+. +....
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~---~~~d~~~-~~~~----~~i~~-- 208 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH---HTINYST-QDFA----EVVRE-- 208 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTT-SCHH----HHHHH--
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEECCC-HHHH----HHHHH--
Confidence 567899999996 335555555554335899999999888877642 321 1121111 1110 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
......+|+++.+... ..++.+.++|+++|.++..+.
T Consensus 209 ----------~~~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 209 ----------ITGGKGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp ----------HHTTCCEEEEEECSCT----TTHHHHHHTEEEEEEEEECCC
T ss_pred ----------HhCCCCCeEEEECCcH----HHHHHHHHhhccCCEEEEEec
Confidence 0123469999976643 456778889999999988543
No 362
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.98 E-value=0.035 Score=46.99 Aligned_cols=100 Identities=17% Similarity=0.156 Sum_probs=60.5
Q ss_pred hcCCCcEEEEccCC--CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS--GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~--G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++++||-.|++. |..+..+++....+|++++.++..++.+++ .+.. ..+...+. .+. ..+
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~-~~~-------~~~- 231 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAH---EVFNHREV-NYI-------DKI- 231 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTST-THH-------HHH-
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCCC---EEEeCCCc-hHH-------HHH-
Confidence 56889999999733 455555555433589999999988876653 2321 11211111 110 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
........+|+++.+..- ..+..+.++|+++|.+++.+
T Consensus 232 --------~~~~~~~~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 232 --------KKYVGEKGIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp --------HHHHCTTCEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred --------HHHcCCCCcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 000123469999976542 35677889999999998754
No 363
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.96 E-value=1.5 Score=36.40 Aligned_cols=126 Identities=11% Similarity=0.044 Sum_probs=74.6
Q ss_pred HHHHHHHHhhhcC-CCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCC-CCceeEEecCCccccc
Q 047371 46 KLCLLLLQSLIKG-GELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIG-PKKIKLHLVPDRTFTA 123 (222)
Q Consensus 46 ~~~~~~l~~~~~~-~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~~~~~~~~ 123 (222)
+.+-+.++.++.. ...|+++|||-=.....+......+++=+| .|..++..++.+...+.. .++..++..|... .+
T Consensus 89 ~~~d~~v~~~~~~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~ 166 (310)
T 2uyo_A 89 NFFDTYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DW 166 (310)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CH
T ss_pred HHHHHHHHHHHHhCCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hH
Confidence 3344444444433 367999999986665544322236888899 588998888888654321 2466677666643 21
Q ss_pred ccccccccchhccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCCeEEEEecCCC
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 186 (222)
- + .+. ...+ ....--++++...+++ ...+++.+...+.||+++++..+..
T Consensus 167 ~--~---~l~-------~~g~-d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 167 P--P---ALR-------SAGF-DPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp H--H---HHH-------HTTC-CTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred H--H---HHH-------hccC-CCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 0 1 100 0001 1223345555555554 3457888888889999999976544
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.89 E-value=0.16 Score=42.75 Aligned_cols=100 Identities=11% Similarity=0.102 Sum_probs=61.3
Q ss_pred hcCCCcEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++++||-.|+ | .|..+..+++....+|+++|.++..++.+++. +.. ..+...+ ..+. +..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~-~~~~----~~~---- 228 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK---RGINYRS-EDFA----AVI---- 228 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTT-SCHH----HHH----
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEeCCc-hHHH----HHH----
Confidence 568899998853 3 25566666655345899999999988888652 321 1121111 1110 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.... .+.+|+++.+..-. .++.+.+.|+++|.+++.+.
T Consensus 229 --------~~~~-~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 229 --------KAET-GQGVDIILDMIGAA----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp --------HHHH-SSCEEEEEESCCGG----GHHHHHHTEEEEEEEEECCC
T ss_pred --------HHHh-CCCceEEEECCCHH----HHHHHHHHhccCCEEEEEEe
Confidence 0111 34699999766532 56777889999999988543
No 365
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.75 E-value=0.022 Score=47.94 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=61.8
Q ss_pred hcCCCcEEEEccC--CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTG--SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G--~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|++ .|..+..+++.-..+|++++.++..++.+++. +.. .+ + ... ..+. +....
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~--~v-~-~~~-~~~~----~~v~~-- 221 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GAD--IV-L-PLE-EGWA----KAVRE-- 221 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS--EE-E-ESS-TTHH----HHHHH--
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc--EE-e-cCc-hhHH----HHHHH--
Confidence 5689999999973 36666666665345999999999888877652 322 11 1 111 1110 11111
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
......+|+++.+... ..+..+.++|+++|.+++.+.
T Consensus 222 ----------~~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 222 ----------ATGGAGVDMVVDPIGG----PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp ----------HTTTSCEEEEEESCC------CHHHHHHTEEEEEEEEEC--
T ss_pred ----------HhCCCCceEEEECCch----hHHHHHHHhhcCCCEEEEEEc
Confidence 1133479999976543 256778889999999998543
No 366
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.68 E-value=0.047 Score=46.25 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=59.0
Q ss_pred hc-CCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IK-GGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~-~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
++ +|++||-.|+|. |..+..+++. + .+|+++|.++..++.+++. .+.. .+ +...+.+..
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~---lGa~--~v-i~~~~~~~~----------- 238 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQD---LGAD--DY-VIGSDQAKM----------- 238 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTT---SCCS--CE-EETTCHHHH-----------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHH---cCCc--ee-eccccHHHH-----------
Confidence 55 899999998754 4555556654 5 5899999999887776532 2322 11 111110000
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.. ..+.+|+++...... ..++.+.++|+++|.++..+.
T Consensus 239 ---------~~--~~~g~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 239 ---------SE--LADSLDYVIDTVPVH---HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---------HH--STTTEEEEEECCCSC---CCSHHHHTTEEEEEEEEECSC
T ss_pred ---------HH--hcCCCCEEEECCCCh---HHHHHHHHHhccCCEEEEeCC
Confidence 00 123699999755432 234556789999999988654
No 367
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.66 E-value=0.058 Score=45.67 Aligned_cols=100 Identities=12% Similarity=0.054 Sum_probs=60.7
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++.-..+|+++|.++..++.+++ .+.. .+ +...+...+ ...
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~v-~~~~~~~~~-------~~~--- 239 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGAD--HY-IATLEEGDW-------GEK--- 239 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCS--EE-EEGGGTSCH-------HHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCC--EE-EcCcCchHH-------HHH---
Confidence 67899999999854 556666665423479999999988888765 2322 11 211111010 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+ . +.+|+++....... ...++.+.++|+++|.++..+.
T Consensus 240 ---------~-~-~~~D~vid~~g~~~-~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 240 ---------Y-F-DTFDLIVVCASSLT-DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ---------S-C-SCEEEEEECCSCST-TCCTTTGGGGEEEEEEEEECCC
T ss_pred ---------h-h-cCCCEEEECCCCCc-HHHHHHHHHHhcCCCEEEEecC
Confidence 1 1 47999997554300 1235567789999999887543
No 368
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=93.56 E-value=0.8 Score=37.74 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=45.3
Q ss_pred CCeeEEEecccc----ccHH----------HHHHHHHHcccCCeEEEEecCCCC--cHHHHHHHHHhhhhcceec
Q 047371 148 EEYDVVIANILL----NPLP----------QLADHIVSYAKPGAVVGISGILSE--QLPRIINRYSEFLEDILVS 206 (222)
Q Consensus 148 ~~~D~v~~~~~~----~~~~----------~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 206 (222)
+++|+|++|..- +++. -++..+.++|+|||.+++..+... ..+++...+...|......
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~v 279 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVC 279 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeee
Confidence 679999997642 2322 146888999999999999877666 7899999999987666543
No 369
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.52 E-value=1.4 Score=37.08 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=72.6
Q ss_pred hhHHHHHHHHhhh--cCCCcEEEEccCCCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCC--------------
Q 047371 44 TTKLCLLLLQSLI--KGGELFLDYGTGSGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNI-------------- 106 (222)
Q Consensus 44 ~~~~~~~~l~~~~--~~~~~vLD~G~G~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~-------------- 106 (222)
.++.+-+.+.+++ .+...|+.+|||.......+... +...++-+|. |..++.-++.+...+.
T Consensus 81 Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~ 159 (334)
T 1rjd_A 81 RTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAK 159 (334)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccc
Confidence 4444455555544 35578999999999988887764 4566777777 7777777776654310
Q ss_pred -----CCCceeEEecCCcccccccccccccchhccccccccCCCCCCCeeEEEecccccc-----HHHHHHHHHHcccCC
Q 047371 107 -----GPKKIKLHLVPDRTFTASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP-----LPQLADHIVSYAKPG 176 (222)
Q Consensus 107 -----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~Lkpg 176 (222)
..++..++..|.....+ ...+ +..........++++-.++.. ...+++.+.+.. |+
T Consensus 160 ~~~~~~~~~~~~v~~DL~d~~w-----~~~l--------l~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~ 225 (334)
T 1rjd_A 160 SPFLIDQGRYKLAACDLNDITE-----TTRL--------LDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SH 225 (334)
T ss_dssp TTEEEECSSEEEEECCTTCHHH-----HHHH--------HHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SS
T ss_pred cccccCCCceEEEecCCCCcHH-----HHHH--------HHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CC
Confidence 11356666666654321 0010 011112234577777666554 345677777776 67
Q ss_pred eEEEE
Q 047371 177 AVVGI 181 (222)
Q Consensus 177 G~l~~ 181 (222)
|.+++
T Consensus 226 ~~~v~ 230 (334)
T 1rjd_A 226 GLWIS 230 (334)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 76654
No 370
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.47 E-value=1.1 Score=32.07 Aligned_cols=92 Identities=9% Similarity=0.066 Sum_probs=51.5
Q ss_pred CCcEEEEccCCCHHHHHHH----HhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 59 GELFLDYGTGSGILGIAAI----KFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++-+|+|. ++..++ +.+ .+|+++|.++..++.++.. + ..+..+|..... .....
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g-~~V~~id~~~~~~~~~~~~----~-----~~~~~gd~~~~~-----~l~~~-- 66 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAG-KKVLAVDKSKEKIELLEDE----G-----FDAVIADPTDES-----FYRSL-- 66 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT----T-----CEEEECCTTCHH-----HHHHS--
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHC----C-----CcEEECCCCCHH-----HHHhC--
Confidence 46788888854 444433 444 5899999999887776542 2 335556554321 00111
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
....+|+++...+-......+....+.+. ...++.
T Consensus 67 -----------~~~~~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 67 -----------DLEGVSAVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp -----------CCTTCSEEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred -----------CcccCCEEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 23468999886653322333444444455 445554
No 371
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.41 E-value=0.066 Score=44.25 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=30.2
Q ss_pred CCCCeeEEEecccccc-----------------------HHHHHHHHHHcccCCeEEEEe
Q 047371 146 ETEEYDVVIANILLNP-----------------------LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 146 ~~~~~D~v~~~~~~~~-----------------------~~~~l~~~~~~LkpgG~l~~~ 182 (222)
++++||+|++|||+.. +..++.++.++|||||.+++.
T Consensus 37 ~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 37 PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 5678999999999842 124578899999999999885
No 372
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.38 E-value=0.05 Score=45.97 Aligned_cols=101 Identities=10% Similarity=0.102 Sum_probs=60.4
Q ss_pred hcCCCcEEEEccC--CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTG--SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G--~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|++ .|..+..+++....+|+++|.++..++.+++. +.. ..+...+. .+ ...+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~-~~-------~~~~- 223 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA---AGFNYKKE-DF-------SEAT- 223 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTS-CH-------HHHH-
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc---EEEecCCh-HH-------HHHH-
Confidence 5678999999853 34555555554335899999999888877432 321 11211111 11 0000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
........+|+++.+.... .+..+.++|+++|.+++.+.
T Consensus 224 --------~~~~~~~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 224 --------LKFTKGAGVNLILDCIGGS----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp --------HHHTTTSCEEEEEESSCGG----GHHHHHHHEEEEEEEEECCC
T ss_pred --------HHHhcCCCceEEEECCCch----HHHHHHHhccCCCEEEEEec
Confidence 0011234699999876542 45667889999999998654
No 373
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.36 E-value=0.059 Score=45.35 Aligned_cols=96 Identities=15% Similarity=0.101 Sum_probs=60.6
Q ss_pred hcCCCcEEEEcc-CC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-GS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ |. |..+..+++....+|+++ .++..++.+++ .+.. . +. ....+. +....
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~----lGa~---~-i~--~~~~~~----~~~~~-- 210 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD----LGAT---P-ID--ASREPE----DYAAE-- 210 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH----HTSE---E-EE--TTSCHH----HHHHH--
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH----cCCC---E-ec--cCCCHH----HHHHH--
Confidence 568999999994 32 666666776544589999 88888777754 2332 1 22 211111 00000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
......+|+++.+..- ..+..+.++|+++|.++..
T Consensus 211 ----------~~~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 211 ----------HTAGQGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp ----------HHTTSCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred ----------HhcCCCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 1134579999976542 5677888899999999874
No 374
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.13 E-value=0.17 Score=42.86 Aligned_cols=98 Identities=13% Similarity=0.086 Sum_probs=58.1
Q ss_pred hc-CCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IK-GGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~-~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++ +|++||-.|+|. |..+..+++.-..+|++++.++..++.+++. .+.. . .+...+.+. ...
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~--~-v~~~~~~~~--------~~~-- 247 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGAD--S-FLVSRDQEQ--------MQA-- 247 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCS--E-EEETTCHHH--------HHH--
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCc--e-EEeccCHHH--------HHH--
Confidence 45 899999998754 4555555554335899999999887776532 2321 1 111111000 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+.+|+++....... .++.+.++++++|.++..+.
T Consensus 248 ------------~~~~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 248 ------------AAGTLDGIIDTVSAVH---PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ------------TTTCEEEEEECCSSCC---CSHHHHHHEEEEEEEEECCC
T ss_pred ------------hhCCCCEEEECCCcHH---HHHHHHHHHhcCCEEEEEcc
Confidence 1246999997654321 23456678899999887543
No 375
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.87 E-value=0.089 Score=46.10 Aligned_cols=117 Identities=17% Similarity=0.167 Sum_probs=63.9
Q ss_pred hcCCCcEEEEcc-CC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-GS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ |. |..+..+++....++++++.++..++.+++. |.. . .+...+. .+.....+......
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~--~-vi~~~~~-d~~~~~~~~~~~~~ 297 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE--A-IIDRNAE-GYRFWKDENTQDPK 297 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC--E-EEETTTT-TCCSEEETTEECHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc--E-EEecCcC-cccccccccccchH
Confidence 568999999997 43 6677777775446899999999888888652 322 1 1111111 00000000000000
Q ss_pred h-ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 E-YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~-~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
+ .+-...+........+|+++....- ..+..+.++|+++|.+++.+.
T Consensus 298 ~~~~~~~~i~~~t~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 298 EWKRFGKRIRELTGGEDIDIVFEHPGR----ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECSCH----HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEcCCc----hhHHHHHHHhhCCcEEEEEec
Confidence 0 0000000111133579999975432 567888889999999998543
No 376
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.85 E-value=0.17 Score=41.88 Aligned_cols=88 Identities=14% Similarity=0.043 Sum_probs=55.9
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|++||-.|+|. |..+..+++.-..+|++++ +++.++.+++. |.. .+ + .+ ..
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga~--~v-~--~d---~~------------ 194 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GVR--HL-Y--RE---PS------------ 194 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TEE--EE-E--SS---GG------------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CCC--EE-E--cC---HH------------
Confidence 56899999999954 6666666664234999999 98888887652 321 11 1 11 10
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
. -.+.+|+++....- ..+..+.++|+++|.++..
T Consensus 195 --------~--v~~g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 195 --------Q--VTQKYFAIFDAVNS----QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp --------G--CCSCEEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred --------H--hCCCccEEEECCCc----hhHHHHHHHhcCCCEEEEE
Confidence 0 14569999964322 2236678899999998875
No 377
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.84 E-value=0.09 Score=43.76 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=59.7
Q ss_pred hcCCC-cEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGE-LFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~-~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
+++++ +||-.|+ | .|..+..+++....++++++.++..++.+++ .+.. .+ +...+.. . ...
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~--~~-i~~~~~~-~-----~~~--- 209 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK--EV-LAREDVM-A-----ERI--- 209 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS--EE-EECC----------------
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc--EE-EecCCcH-H-----HHH---
Confidence 55675 8999997 3 3666676766533579999999888877754 2322 11 1111110 0 000
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
... ..+.+|+++.+..- ..++.+.++++++|.+++.+.
T Consensus 210 ---------~~~-~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 210 ---------RPL-DKQRWAAAVDPVGG----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp -----------C-CSCCEEEEEECSTT----TTHHHHHHTEEEEEEEEECSC
T ss_pred ---------HHh-cCCcccEEEECCcH----HHHHHHHHhhccCCEEEEEee
Confidence 001 23469999976543 246778889999999988644
No 378
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.82 E-value=0.33 Score=40.84 Aligned_cols=99 Identities=17% Similarity=0.165 Sum_probs=62.8
Q ss_pred hcCC------CcEEEEccCC-CHHH-HHHH-Hh-CCCEEEEEeCChH---HHHHHHHHHHhcCCCCCceeEEecCCcccc
Q 047371 56 IKGG------ELFLDYGTGS-GILG-IAAI-KF-GAAMFVGVDIDPQ---VIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122 (222)
Q Consensus 56 ~~~~------~~vLD~G~G~-G~~~-~~la-~~-~~~~v~gvD~s~~---~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~ 122 (222)
+++| ++||-.|+|. |..+ ..++ +. +..+|+++|.++. .++.+++ .|.. .+ ......+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~--~v---~~~~~~~- 233 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDAT--YV---DSRQTPV- 233 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTCE--EE---ETTTSCG-
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCCc--cc---CCCccCH-
Confidence 6688 9999999854 5666 7777 54 5445999999987 7777754 2321 11 1111111
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCC
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 185 (222)
.. + ..+ . +.+|+++..... ...++.+.++|+++|.+++.+..
T Consensus 234 ------~~-i---------~~~-~-gg~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 234 ------ED-V---------PDV-Y-EQMDFIYEATGF---PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp ------GG-H---------HHH-S-CCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECCCC
T ss_pred ------HH-H---------HHh-C-CCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEEeCC
Confidence 00 1 111 1 279999965432 34678888999999999986543
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.81 E-value=0.15 Score=42.70 Aligned_cols=98 Identities=20% Similarity=0.282 Sum_probs=59.6
Q ss_pred CCCcEEEEccCC-CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 58 GGELFLDYGTGS-GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G~G~-G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+|++||-.|+|. |..+..+++. +..+|+++|.++..++.+++. . +.+ +...+ ..+. +. +
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a------~~v-~~~~~-~~~~----~~---~--- 224 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A------DRL-VNPLE-EDLL----EV---V--- 224 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C------SEE-ECTTT-SCHH----HH---H---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H------Hhc-cCcCc-cCHH----HH---H---
Confidence 899999999854 5556666664 544899999998777666442 1 111 11111 1110 00 0
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.... ...+|+++..... ...++.+.++|+++|.+++.+.
T Consensus 225 ------~~~~-~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 225 ------RRVT-GSGVEVLLEFSGN---EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp ------HHHH-SSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECCC
T ss_pred ------HHhc-CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEec
Confidence 0011 3469999975532 3567888899999999988544
No 380
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.67 E-value=0.083 Score=44.01 Aligned_cols=98 Identities=12% Similarity=0.167 Sum_probs=60.1
Q ss_pred hcCCC-cEEEEcc-C-CCHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccccc
Q 047371 56 IKGGE-LFLDYGT-G-SGILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 56 ~~~~~-~vLD~G~-G-~G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
+++++ +||-.|+ | .|..+..+++. + .++++++.++..++.+++ .+.. .+ +...+.. . ..
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~----lGa~--~v-~~~~~~~-~-----~~--- 209 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQ----LGAS--EV-ISREDVY-D-----GT--- 209 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHH----HTCS--EE-EEHHHHC-S-----SC---
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH----cCCc--EE-EECCCch-H-----HH---
Confidence 55675 8999997 3 35666666654 5 579999999888877764 2322 11 1111100 0 00
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.... ..+.+|+++....- ..+..+.++++++|.+++.+.
T Consensus 210 ---------~~~~-~~~~~d~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 210 ---------LKAL-SKQQWQGAVDPVGG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ---------CCSS-CCCCEEEEEESCCT----HHHHHHHTTEEEEEEEEECCC
T ss_pred ---------HHHh-hcCCccEEEECCcH----HHHHHHHHhhcCCCEEEEEec
Confidence 0011 23469999975532 367888899999999988644
No 381
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.58 E-value=0.084 Score=44.26 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=31.5
Q ss_pred CCCCeeEEEecccccc-----------------HHHHHHHHHHcccCCeEEEEe
Q 047371 146 ETEEYDVVIANILLNP-----------------LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 146 ~~~~~D~v~~~~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+.++||+|+++||+.. +.+.+..+.++|||||.+++.
T Consensus 30 ~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 30 PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 5678999999999842 456789999999999999985
No 382
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.17 E-value=1.6 Score=32.58 Aligned_cols=97 Identities=12% Similarity=0.040 Sum_probs=53.2
Q ss_pred CCcEEEEccCC-CH-HHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 59 GELFLDYGTGS-GI-LGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 59 ~~~vLD~G~G~-G~-~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
+.+|+-+|+|. |. ++..|.+. + .+|+++|.++..++.++. .+. ....+|......
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~----~g~-----~~~~gd~~~~~~------------ 96 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIEIREEAAQQHRS----EGR-----NVISGDATDPDF------------ 96 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHH----TTC-----CEEECCTTCHHH------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEECCHHHHHHHHH----CCC-----CEEEcCCCCHHH------------
Confidence 56898888764 32 23334444 5 579999999988766543 232 244444432110
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+........+|+|+...+-......+-...+.+.|++.++..
T Consensus 97 -----l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 97 -----WERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp -----HHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred -----HHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 000001345899997544333333333455566777777764
No 383
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.15 E-value=0.31 Score=44.98 Aligned_cols=53 Identities=9% Similarity=0.048 Sum_probs=35.5
Q ss_pred CCCeeEEEeccccc------cHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh-hhcc
Q 047371 147 TEEYDVVIANILLN------PLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF-LEDI 203 (222)
Q Consensus 147 ~~~~D~v~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~ 203 (222)
...+|.++.++.-. +..+++..+.++++|||.+...... ..+.+.+.+. |...
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~----~~vr~~l~~aGf~~~ 228 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA----GFVRRGLQQAGFNVT 228 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC----HHHHHHHHHTTCEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc----HHHHHHHHhCCeEEE
Confidence 46799999865322 2477999999999999988764322 3455555443 5433
No 384
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.08 E-value=0.18 Score=41.37 Aligned_cols=94 Identities=11% Similarity=0.073 Sum_probs=59.5
Q ss_pred hcCCCcEEEEcc-C-CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-G-SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ | .|..+..+++....+|++++.++..++.+++ .+.. .+ +...+...+. .
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~--~~-~~~~~~~~~~--------~-- 185 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE--EA-ATYAEVPERA--------K-- 185 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS--EE-EEGGGHHHHH--------H--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC--EE-EECCcchhHH--------H--
Confidence 678999999997 3 3566666666533599999999988877754 2321 11 1111000010 0
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
..+.+|+++. ... ..++.+.++++++|.++..+
T Consensus 186 ------------~~~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 186 ------------AWGGLDLVLE-VRG----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp ------------HTTSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC-
T ss_pred ------------HhcCceEEEE-CCH----HHHHHHHHhhccCCEEEEEe
Confidence 1156999997 433 35678888999999988743
No 385
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.90 E-value=1.5 Score=34.95 Aligned_cols=60 Identities=12% Similarity=0.033 Sum_probs=42.2
Q ss_pred CCCcEEEEccCC--C---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 58 GGELFLDYGTGS--G---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 58 ~~~~vLD~G~G~--G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
+|+++|-.|+++ | .++..+++.| .+|+.++.++..++.+.+.+...+- .++.+...|...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G-a~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 69 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG-AKLVFTYRKERSRKELEKLLEQLNQ--PEAHLYQIDVQS 69 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHGGGTC--SSCEEEECCTTC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCC--CcEEEEEccCCC
Confidence 588999999754 4 2455666676 6899999999888888776655442 256666777644
No 386
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.89 E-value=1.1 Score=36.85 Aligned_cols=94 Identities=14% Similarity=0.094 Sum_probs=57.5
Q ss_pred hcCCCcEEEEc-cCC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYG-TGS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G-~G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.| +|. |..+..+++.-..++++++ ++..++.+++ .+.. . .+...+.+.+..
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~--~-~i~~~~~~~~~~---------- 211 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE--Q-CINYHEEDFLLA---------- 211 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS--E-EEETTTSCHHHH----------
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC--E-EEeCCCcchhhh----------
Confidence 67899999986 554 6777777765345899887 5555555543 3432 1 121111110100
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
....+|+++....- ..+..+.++|+++|.++..+
T Consensus 212 ------------~~~g~D~v~d~~g~----~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 212 ------------ISTPVDAVIDLVGG----DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ------------CCSCEEEEEESSCH----HHHHHHGGGEEEEEEEEECC
T ss_pred ------------hccCCCEEEECCCc----HHHHHHHHhccCCCEEEEeC
Confidence 22569999965432 23478899999999999854
No 387
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.85 E-value=1.5 Score=34.92 Aligned_cols=61 Identities=16% Similarity=0.154 Sum_probs=43.3
Q ss_pred CCCcEEEEcc-CCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGT-GSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~-G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|+ |.| .++..+++.+ .+|+.++.++..++.+.+.+...+- .++.+...|....
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG-ADVVISDYHERRLGETRDQLADLGL--GRVEAVVCDVTST 85 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTCS--SCEEEEECCTTCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhcCC--CceEEEEeCCCCH
Confidence 4778898887 555 2555666666 6799999999888887776654432 3677888877554
No 388
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.81 E-value=0.94 Score=39.25 Aligned_cols=95 Identities=18% Similarity=0.175 Sum_probs=58.2
Q ss_pred CCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 59 GELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 59 ~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
..+|+-+|+|. |. ++..|...+ ..|+++|.++..++.++. .+ +.++.+|+.... .+...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~d~~~v~~~~~----~g-----~~vi~GDat~~~-----~L~~a---- 64 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG-VKMVVLDHDPDHIETLRK----FG-----MKVFYGDATRMD-----LLESA---- 64 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEECCHHHHHHHHH----TT-----CCCEESCTTCHH-----HHHHT----
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHh----CC-----CeEEEcCCCCHH-----HHHhc----
Confidence 45688888754 32 222333344 579999999999888764 23 336677765431 11111
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
....+|++++...-......+-...+.+.|...++.
T Consensus 65 ---------gi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 65 ---------GAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp ---------TTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ---------CCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 345689888755444344456666777788877766
No 389
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.78 E-value=0.15 Score=41.29 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=30.7
Q ss_pred CCCCeeEEEecccccc-----------------HHHHHHHHHHcccCCeEEEEe
Q 047371 146 ETEEYDVVIANILLNP-----------------LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 146 ~~~~~D~v~~~~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+.++||+|+++||+.. +...+..+.++|+|+|.+++.
T Consensus 20 ~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4678999999999842 345688889999999999986
No 390
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=91.70 E-value=1.8 Score=36.97 Aligned_cols=134 Identities=15% Similarity=0.168 Sum_probs=81.3
Q ss_pred HHHHHHhhh-cCCCcEEEEccCCCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccc
Q 047371 48 CLLLLQSLI-KGGELFLDYGTGSGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMN 126 (222)
Q Consensus 48 ~~~~l~~~~-~~~~~vLD~G~G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (222)
..++|.+.+ +-+.+||.++-+.|.++..+. +..+++.+.-+-..... +..+++.. .. ... ..
T Consensus 34 ~~~~l~~~~~~~~~~~l~~n~~~g~~~~~~~--~~~~~~~~~~~~~~~~~----l~~~~~~~---~~--~~~--~~---- 96 (381)
T 3dmg_A 34 VHDLLQKTVEPFGERALDLNPGVGWGSLPLE--GRMAVERLETSRAAFRC----LTASGLQA---RL--ALP--WE---- 96 (381)
T ss_dssp HHHHHHTTCCCCSSEEEESSCTTSTTTGGGB--TTBEEEEEECBHHHHHH----HHHTTCCC---EE--CCG--GG----
T ss_pred HHHHHHHHHHHhCCcEEEecCCCCccccccC--CCCceEEEeCcHHHHHH----HHHcCCCc---cc--cCC--cc----
Confidence 344444443 345789999999998776553 22466766544433322 55567641 11 110 10
Q ss_pred cccccchhccccccccCCCCCCCeeEEEeccccc----cHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhhhhc
Q 047371 127 ERVDGVVEYLSSHEIRGISETEEYDVVIANILLN----PLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEFLED 202 (222)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 202 (222)
.....||+|+.-.|-+ .....+.++.+.|+|||.+++.+-.....+++...+...+..
T Consensus 97 ------------------~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~~~~~~ 158 (381)
T 3dmg_A 97 ------------------AAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGY 158 (381)
T ss_dssp ------------------SCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHHHHHSC
T ss_pred ------------------CCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHHhhhcc
Confidence 0456799999877742 245678889999999999999876667777777777654333
Q ss_pred cee-cccCCceEeec
Q 047371 203 ILV-SEKDDWRCVSG 216 (222)
Q Consensus 203 ~~~-~~~~~w~~~~~ 216 (222)
... .....|.|...
T Consensus 159 ~~~~~~~~~~r~~~~ 173 (381)
T 3dmg_A 159 GVVVRREGPYRVALL 173 (381)
T ss_dssp EEEEEEETTEEEEEE
T ss_pred ccccccccCcEEEEE
Confidence 222 22344554443
No 391
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.67 E-value=1.3 Score=35.65 Aligned_cols=86 Identities=14% Similarity=0.118 Sum_probs=56.0
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+|+.+|--|++.|. ++..+++.| .+|+.+|.+++.++.+.+.+...+. ++.....|..... ..........
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~Dv~~~~-~v~~~~~~~~- 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKGY---DAHGVAFDVTDEL-AIEAAFSKLD- 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCCTTCHH-HHHHHHHHHH-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEeeCCCHH-HHHHHHHHHH-
Confidence 58888888888772 555666676 6899999999999888777766553 4556666664431 1111111111
Q ss_pred ccccccccCCCCCCCeeEEEecccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANILL 159 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~ 159 (222)
...++.|+++.|...
T Consensus 82 ----------~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 82 ----------AEGIHVDILINNAGI 96 (255)
T ss_dssp ----------HTTCCCCEEEECCCC
T ss_pred ----------HHCCCCcEEEECCCC
Confidence 145679999988654
No 392
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.42 E-value=0.71 Score=33.78 Aligned_cols=100 Identities=15% Similarity=0.042 Sum_probs=52.4
Q ss_pred cCCCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++|+-+|+|. |. ++..+...+ .+|+++|.++..++.++. .. .......+..... .+...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~---~~-----g~~~~~~d~~~~~-----~l~~~-- 80 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS---EF-----SGFTVVGDAAEFE-----TLKEC-- 80 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT---TC-----CSEEEESCTTSHH-----HHHTT--
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh---cC-----CCcEEEecCCCHH-----HHHHc--
Confidence 3578899998764 33 222333445 589999999865443221 11 2223334332210 00000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
....+|+|+...+.......+..+.+.+.+...++...
T Consensus 81 -----------~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 81 -----------GMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp -----------TGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred -----------CcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 13458999986554444444555555556666666643
No 393
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.40 E-value=3 Score=34.50 Aligned_cols=90 Identities=20% Similarity=0.170 Sum_probs=59.0
Q ss_pred CcEEEEccCC-C-HHHHHHHHhCC-CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 60 ELFLDYGTGS-G-ILGIAAIKFGA-AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 60 ~~vLD~G~G~-G-~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
++|.=+|+|. | .++..+.+.+. .+|+++|.++..++.+.+ .+.. .....+...+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~----~~~~~~~~~~--------------- 90 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGII----DEGTTSIAKV--------------- 90 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSC----SEEESCTTGG---------------
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCc----chhcCCHHHH---------------
Confidence 5788898875 3 35555656653 289999999988777653 2321 0111111110
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
.....|+|+...+.....++++++...++++..++-
T Consensus 91 ---------~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 91 ---------EDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp ---------GGGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred ---------hhccCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEE
Confidence 023479999887777788889999999999876654
No 394
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.17 E-value=1.1 Score=36.63 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=65.4
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+|+.+|--|++.|. ++..+++.| .+|+.+|.+++.++.+.+.+ + .+......|..... .........++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~G-a~V~i~~r~~~~l~~~~~~~---g---~~~~~~~~Dv~~~~-~v~~~~~~~~~ 99 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEG-ARVFITGRRKDVLDAAIAEI---G---GGAVGIQADSANLA-ELDRLYEKVKA 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH---C---TTCEEEECCTTCHH-HHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHc---C---CCeEEEEecCCCHH-HHHHHHHHHHH
Confidence 58899999988873 555666666 68999999999887765543 2 24445566664431 11111111111
Q ss_pred ccccccccCCCCCCCeeEEEecccccc----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNP----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
..++.|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 100 -----------~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIn 157 (273)
T 4fgs_A 100 -----------EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVL 157 (273)
T ss_dssp -----------HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEE
T ss_pred -----------HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEE
Confidence 3467999998865321 01135777888888888776
No 395
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.85 E-value=2.3 Score=34.11 Aligned_cols=108 Identities=21% Similarity=0.225 Sum_probs=63.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC------------hHHHHHHHHHHHhcCCCCCceeEEecCCcccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID------------PQVIKSAHQNAALNNIGPKKIKLHLVPDRTFT 122 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~ 122 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.+ ...++.+...+...+ .++.+...|.....
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCCCHH
Confidence 4778888887765 2444555566 689999987 666666665555443 35677777765431
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEecccccc--------------------HHHHHHHHHHcccCCeEEEE
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLNP--------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
. +........+ ..++.|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 85 ~-v~~~~~~~~~-----------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 85 A-VSRELANAVA-----------EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp H-HHHHHHHHHH-----------HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred H-HHHHHHHHHH-----------HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 0 1111111100 1246899998765321 11245777777788888776
No 396
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.82 E-value=3 Score=29.10 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=50.1
Q ss_pred CCcEEEEccCCCHHHHHH----HHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 59 GELFLDYGTGSGILGIAA----IKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~l----a~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++|+-+|+| .++..+ .+.+ .+|+++|.++..++.+... .+ +.+...+...... ...
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~~---~~-----~~~~~~d~~~~~~-----l~~--- 64 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKG-HDIVLIDIDKDICKKASAE---ID-----ALVINGDCTKIKT-----LED--- 64 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH---CS-----SEEEESCTTSHHH-----HHH---
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHh---cC-----cEEEEcCCCCHHH-----HHH---
Confidence 4578888764 444443 3344 5799999998876655432 12 2233444322110 000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
.....+|+|+...+.......+..+.+.+.++. ++.
T Consensus 65 ----------~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~-ii~ 100 (140)
T 1lss_A 65 ----------AGIEDADMYIAVTGKEEVNLMSSLLAKSYGINK-TIA 100 (140)
T ss_dssp ----------TTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCC-EEE
T ss_pred ----------cCcccCCEEEEeeCCchHHHHHHHHHHHcCCCE-EEE
Confidence 023468999987655444444555666677764 444
No 397
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.78 E-value=0.14 Score=43.38 Aligned_cols=94 Identities=15% Similarity=0.182 Sum_probs=58.0
Q ss_pred CCcEEEEccCC-CHHHHHHHH-hCCCEEEEEeCCh---HHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 59 GELFLDYGTGS-GILGIAAIK-FGAAMFVGVDIDP---QVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 59 ~~~vLD~G~G~-G~~~~~la~-~~~~~v~gvD~s~---~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
|++||-.|+|. |..+..+++ .+. +|+++|.++ ..++.+++ .+.. .+ . .+ .+. + .+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~----~ga~--~v--~-~~--~~~----~---~~- 240 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEE----TKTN--YY--N-SS--NGY----D---KL- 240 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHH----HTCE--EE--E-CT--TCS----H---HH-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHH----hCCc--ee--c-hH--HHH----H---HH-
Confidence 99999999843 444555554 454 999999998 77776654 2321 12 1 11 110 0 00
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHH-HHHHHcccCCeEEEEecCC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLA-DHIVSYAKPGAVVGISGIL 185 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~ 185 (222)
.. .. +.+|+++.+.... ..+ +.+.+.|+++|.+++.+..
T Consensus 241 --------~~-~~-~~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 241 --------KD-SV-GKFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp --------HH-HH-CCEEEEEECCCCC---THHHHHHGGGEEEEEEEEECSCC
T ss_pred --------HH-hC-CCCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEecC
Confidence 00 02 4699999866542 245 7888999999999886543
No 398
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.68 E-value=0.44 Score=46.02 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=35.6
Q ss_pred CcEEEEccCCCHHHHHHHHhCC-CEEEEEeCChHHHHHHHHHH
Q 047371 60 ELFLDYGTGSGILGIAAIKFGA-AMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~ 101 (222)
.+++|++||.|.++.-+.+.|. ..+.++|+++.+.+..+.|.
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 4799999999999998877776 57889999999888777664
No 399
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.59 E-value=0.77 Score=39.84 Aligned_cols=112 Identities=20% Similarity=0.143 Sum_probs=62.3
Q ss_pred hcCCCcEEEEcc-CC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEec--CCccccccc----cc
Q 047371 56 IKGGELFLDYGT-GS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLV--PDRTFTASM----NE 127 (222)
Q Consensus 56 ~~~~~~vLD~G~-G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~--~~~~~~~~~----~~ 127 (222)
+++|++||-.|+ |. |..+..+++....++++++.++..++.+++ .+.. . .+... +......+. ..
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~--~-~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCD--L-VINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCC--C-EEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC--E-EEecccccccccccccccccch
Confidence 568999999987 32 566666666544689999999988887754 2432 1 11111 100000000 00
Q ss_pred ccccchhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 128 RVDGVVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
....+ ...+... ....+|+++.+... ..++.+.++++++|.+++.+.
T Consensus 291 ~~~~~-----~~~v~~~-~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 291 TGRKL-----AKLVVEK-AGREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHH-----HHHHHHH-HSSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESCC
T ss_pred hhhHH-----HHHHHHH-hCCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEec
Confidence 00000 0000111 13469999976543 457788889999999998543
No 400
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.50 E-value=0.21 Score=41.88 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=31.0
Q ss_pred CCCCeeEEEecccccc--------------HHHHHHHHHHcccCCeEEEEe
Q 047371 146 ETEEYDVVIANILLNP--------------LPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 146 ~~~~~D~v~~~~~~~~--------------~~~~l~~~~~~LkpgG~l~~~ 182 (222)
+.+++|+|+++||+.. +...+..+.++|+|+|.+++.
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 5678999999999852 345678889999999999985
No 401
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.26 E-value=0.87 Score=36.76 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=56.5
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+|+.+|--|++.|. ++..+++.+ .+|+.+|.+++.++.+.+.+...+. ++.+...|..... .........++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~G-a~Vv~~~~~~~~~~~~~~~i~~~g~---~~~~~~~Dvt~~~-~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALND-SIVVAVELLEDRLNQIVQELRGMGK---EVLGVKADVSKKK-DVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEccCCCHH-HHHHHHHHHHH
Confidence 58899999988873 555666666 6899999999999888887776653 5667777765442 11111111111
Q ss_pred ccccccccCCCCCCCeeEEEeccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANIL 158 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~ 158 (222)
..++.|+++.|..
T Consensus 81 -----------~~G~iDiLVNNAG 93 (254)
T 4fn4_A 81 -----------TYSRIDVLCNNAG 93 (254)
T ss_dssp -----------HHSCCCEEEECCC
T ss_pred -----------HcCCCCEEEECCc
Confidence 3467899998764
No 402
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.25 E-value=3.5 Score=31.73 Aligned_cols=92 Identities=11% Similarity=-0.048 Sum_probs=53.9
Q ss_pred cEEEEccCCCHHHHHHH----HhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 61 LFLDYGTGSGILGIAAI----KFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 61 ~vLD~G~G~G~~~~~la----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+|+-+|+ |.++..++ +.+ ..|+++|.++..++..... . ...+..+|..... .+...
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g-~~v~vid~~~~~~~~l~~~---~-----~~~~i~gd~~~~~-----~l~~a---- 61 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRK-YGVVIINKDRELCEEFAKK---L-----KATIIHGDGSHKE-----ILRDA---- 61 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHH---S-----SSEEEESCTTSHH-----HHHHH----
T ss_pred EEEEECC--CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHH---c-----CCeEEEcCCCCHH-----HHHhc----
Confidence 4666665 55555444 344 5799999999887765432 1 2346666664421 01111
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
....+|++++..+-+.....+..+.+.+.+...++.
T Consensus 62 ---------~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 62 ---------EVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp ---------TCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred ---------CcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 245689999866555444556666666666666665
No 403
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.95 E-value=1.4 Score=40.35 Aligned_cols=49 Identities=10% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCCeeEEEecccc------ccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHHHhh
Q 047371 147 TEEYDVVIANILL------NPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRYSEF 199 (222)
Q Consensus 147 ~~~~D~v~~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 199 (222)
...||.++.++.- -+..+++..+.++++|||.+...+.. ..+.+.+.+.
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~----~~vr~~L~~a 231 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA----GFVRRGLQDA 231 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC----HHHHHHHHHH
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc----HHHHHHHHhC
Confidence 4679999986522 22567899999999999998875433 3445555443
No 404
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.81 E-value=2.2 Score=35.29 Aligned_cols=113 Identities=14% Similarity=0.070 Sum_probs=65.2
Q ss_pred CCCcEEEEccCC-C-HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 58 GGELFLDYGTGS-G-ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 58 ~~~~vLD~G~G~-G-~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
...+|.-+|+|. | .++..+++.+ .+|+.+ .+++.++..++. ++. ....+. .+...+.. ..
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~-~~~~~~~~i~~~----g~~-----~~~~~~-~~~~~~~~-~~----- 79 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG-HEVILI-ARPQHVQAIEAT----GLR-----LETQSF-DEQVKVSA-SS----- 79 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT-CEEEEE-CCHHHHHHHHHH----CEE-----EECSSC-EEEECCEE-ES-----
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC-CeEEEE-EcHhHHHHHHhC----CeE-----EEcCCC-cEEEeeee-eC-----
Confidence 356799999986 4 3555666665 478888 888777766543 211 110000 00000000 00
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHH
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINR 195 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 195 (222)
+......+|+|+..-+.....++++.+...++++..++.....-...+.+.+.
T Consensus 80 -------~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~ 132 (318)
T 3hwr_A 80 -------DPSAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRSL 132 (318)
T ss_dssp -------CGGGGTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHH
T ss_pred -------CHHHcCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHH
Confidence 00012468999987777778899999999999998777654444443444443
No 405
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.74 E-value=1.8 Score=34.33 Aligned_cols=105 Identities=9% Similarity=0.020 Sum_probs=62.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++...+.+ + .++.+...|...... .........+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~-v~~~~~~~~~ 78 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGG-AEVLLTGRNESNIARIREEF---G---PRVHALRSDIADLNE-IAVLGAAAGQ 78 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH---G---GGEEEEECCTTCHHH-HHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh---C---CcceEEEccCCCHHH-HHHHHHHHHH
Confidence 4788898887765 2444555566 58999999998877665544 1 256677777654310 0011111100
Q ss_pred ccccccccCCCCCCCeeEEEecccccc----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNP----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
..+++|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 79 -----------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 136 (255)
T 4eso_A 79 -----------TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVF 136 (255)
T ss_dssp -----------HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred -----------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEE
Confidence 2347899998754321 01245667777777888776
No 406
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.67 E-value=1.2 Score=39.43 Aligned_cols=112 Identities=18% Similarity=0.168 Sum_probs=67.6
Q ss_pred CCCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCC-------------ceeEEecCCcccc
Q 047371 58 GGELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPK-------------KIKLHLVPDRTFT 122 (222)
Q Consensus 58 ~~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-------------~v~~~~~~~~~~~ 122 (222)
..++|.-+|+|. |. ++..+++.+ .+|+++|.++..++..++.. ..+... ++.+.. +..
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d~~~~~v~~l~~~~--~~i~e~gl~~~l~~~~~~~~l~~tt-d~~--- 79 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG-HDVFCLDVDQAKIDILNNGG--VPIHEPGLKEVIARNRSAGRLRFST-DIE--- 79 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTTC--CSSCCTTHHHHHHHHHHTTCEEEEC-CHH---
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHCCC--CCcCCCCHHHHHHHhcccCCEEEEC-CHH---
Confidence 457898898886 43 555666666 47999999999888776531 111000 111100 000
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEecccc----------ccHHHHHHHHHHcccCCeEEEE-ecCCCCcHHH
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILL----------NPLPQLADHIVSYAKPGAVVGI-SGILSEQLPR 191 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~----------~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 191 (222)
. .....|+|+...+- ......++.+...++++..++. +++.....+.
T Consensus 80 --------~--------------a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~ 137 (478)
T 2y0c_A 80 --------A--------------AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAER 137 (478)
T ss_dssp --------H--------------HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHH
T ss_pred --------H--------------HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHH
Confidence 0 01247888886544 4567788889999999877655 3444555566
Q ss_pred HHHHHHh
Q 047371 192 IINRYSE 198 (222)
Q Consensus 192 ~~~~~~~ 198 (222)
+.+.+.+
T Consensus 138 l~~~l~~ 144 (478)
T 2y0c_A 138 VRAAVAE 144 (478)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555544
No 407
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.58 E-value=3.9 Score=32.33 Aligned_cols=109 Identities=11% Similarity=0.053 Sum_probs=63.4
Q ss_pred CCCcEEEEccC--CC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 58 GGELFLDYGTG--SG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 58 ~~~~vLD~G~G--~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++++|-.|++ .| .++..+++.+ .+|+.++.++...+.+.+.....+- .++.+...|..... .+.......
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~-~v~~~~~~~ 81 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAG-ARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDA-EIETCFASI 81 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCCSSSH-HHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCCCCHH-HHHHHHHHH
Confidence 47789999877 44 2455566666 5799999887666666555444332 25677777765431 011111111
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc--------------------------HHHHHHHHHHcccCCeEEEE
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP--------------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
.+ ..+++|+++.|..... ...+++.+...++++|.++.
T Consensus 82 ~~-----------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 145 (266)
T 3oig_A 82 KE-----------QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVT 145 (266)
T ss_dssp HH-----------HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred HH-----------HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEE
Confidence 00 1246899888754321 01245677778888888776
No 408
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.52 E-value=0.28 Score=41.63 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=58.3
Q ss_pred hcCCCcEEEEcc-CC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGT-GS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~-G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+ |. |..+..+++....+|++++ ++..++.+++ .+.. ..+...+ ..+ ...+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~~~~-~~~-------~~~~- 243 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGAD---DVIDYKS-GSV-------EEQL- 243 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTS-SCH-------HHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCC---EEEECCc-hHH-------HHHH-
Confidence 567899999983 43 6666666665336899998 6666666543 3432 1121111 111 0001
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. ....+|+++.+..-. ...++...++++++|.++..+.
T Consensus 244 --------~---~~~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 244 --------K---SLKPFDFILDNVGGS--TETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp --------H---TSCCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEESCC
T ss_pred --------h---hcCCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEeCC
Confidence 0 124699999755432 1345677789999999988654
No 409
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.40 E-value=2 Score=35.02 Aligned_cols=60 Identities=18% Similarity=0.140 Sum_probs=42.4
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++..++.+.+.+...+ .++.+...|....
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~ 92 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRG-ARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRHL 92 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCCH
Confidence 5778998887765 2444555566 589999999998888877666544 2567777776543
No 410
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=89.33 E-value=0.49 Score=38.62 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=43.6
Q ss_pred CCCeeEEEeccc----cccHH----------HHHHHHHHcccCCeEEEEe--cCCCCcHHHHHHHHHhhhhccee
Q 047371 147 TEEYDVVIANIL----LNPLP----------QLADHIVSYAKPGAVVGIS--GILSEQLPRIINRYSEFLEDILV 205 (222)
Q Consensus 147 ~~~~D~v~~~~~----~~~~~----------~~l~~~~~~LkpgG~l~~~--~~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
.++||+|++|.. +||+. .+-..+.++|+|||.+++. +......+.+...+...|.....
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv 283 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRA 283 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeee
Confidence 479999999865 24432 2457788999999999985 55566778888888887755544
No 411
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=89.19 E-value=0.23 Score=41.71 Aligned_cols=98 Identities=18% Similarity=0.100 Sum_probs=54.6
Q ss_pred cCC-CcEEEEccCCC---HHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccccccc
Q 047371 57 KGG-ELFLDYGTGSG---ILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDG 131 (222)
Q Consensus 57 ~~~-~~vLD~G~G~G---~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (222)
+++ +++|-. .|+| ..+..+++. + .+|++++.++..++.+++. +.. ..+.. ....+. +....
T Consensus 162 ~~g~~~vli~-gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~-~~~~~~----~~v~~ 227 (349)
T 3pi7_A 162 QEGEKAFVMT-AGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDI----GAA---HVLNE-KAPDFE----ATLRE 227 (349)
T ss_dssp HHCCSEEEES-STTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHH----TCS---EEEET-TSTTHH----HHHHH
T ss_pred hCCCCEEEEe-CCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc----CCC---EEEEC-CcHHHH----HHHHH
Confidence 345 455543 3444 444445544 5 5999999999988888642 321 11211 111110 00000
Q ss_pred chhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 132 VVEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
. .....+|+++..... ..+..+.++|+++|.+++.+.
T Consensus 228 ~------------~~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 228 V------------MKAEQPRIFLDAVTG----PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp H------------HHHHCCCEEEESSCH----HHHHHHHHHSCTTCEEEECCC
T ss_pred H------------hcCCCCcEEEECCCC----hhHHHHHhhhcCCCEEEEEec
Confidence 0 012369999975543 234778889999999998643
No 412
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.97 E-value=3.6 Score=33.83 Aligned_cols=62 Identities=16% Similarity=0.134 Sum_probs=42.8
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.|. ++..+++.+ .+|++++.++..++.+.+.+...+.. .++.+...|....
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQG-CKVAIADIRQDSIDKALATLEAEGSG-PEVMGVQLDVASR 71 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEECCTTCH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCC-CeEEEEECCCCCH
Confidence 46789988887662 444555566 58999999999888877766554421 2566777776543
No 413
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.92 E-value=5.5 Score=32.23 Aligned_cols=107 Identities=13% Similarity=0.043 Sum_probs=62.1
Q ss_pred CCCcEEEEccCCC-----HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 58 GGELFLDYGTGSG-----ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 58 ~~~~vLD~G~G~G-----~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++...+.+++.....+ ++.+...|..... .+.......
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~-~v~~~~~~~ 103 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG-AELAFTYQGDALKKRVEPLAEELG----AFVAGHCDVADAA-SIDAVFETL 103 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT-CEEEEEECSHHHHHHHHHHHHHHT----CEEEEECCTTCHH-HHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcC----CceEEECCCCCHH-HHHHHHHHH
Confidence 5788999998743 2444555666 579999998765555554443332 4566667765431 011111111
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc--------------------------HHHHHHHHHHcccCCeEEEE
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP--------------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
.+ ..++.|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 104 ~~-----------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~ 167 (293)
T 3grk_A 104 EK-----------KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILT 167 (293)
T ss_dssp HH-----------HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HH-----------hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 00 2357899998765321 01245677777777888776
No 414
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.92 E-value=3.1 Score=32.90 Aligned_cols=60 Identities=8% Similarity=-0.025 Sum_probs=42.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+ .++.+...|....
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEG-FTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARNE 68 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCCH
Confidence 4778888887765 2444555566 589999999988888777666544 3677777777543
No 415
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.65 E-value=4.4 Score=35.28 Aligned_cols=108 Identities=25% Similarity=0.345 Sum_probs=65.5
Q ss_pred CCCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCC-------------CCceeEEecCCcccc
Q 047371 58 GGELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIG-------------PKKIKLHLVPDRTFT 122 (222)
Q Consensus 58 ~~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------------~~~v~~~~~~~~~~~ 122 (222)
.|.++--+|+|. |. ++..+++.| -+|+++|++++.++...+.. ..+. ..++.+..
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G-~~V~~~D~~~~kv~~L~~g~--~pi~epgl~~ll~~~~~~g~l~~tt------- 79 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHG-VDVLGVDINQQTIDKLQNGQ--ISIEEPGLQEVYEEVLSSGKLKVST------- 79 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTTC--CSSCCTTHHHHHHHHHHTTCEEEES-------
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHCCC--CCcCCCCHHHHHHhhcccCceEEeC-------
Confidence 467777788886 43 445566666 48999999999888776521 1110 00111110
Q ss_pred cccccccccchhccccccccCCCCCCCeeEEEeccccc------------cHHHHHHHHHHcccCCeEEEE-ecCCCCcH
Q 047371 123 ASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN------------PLPQLADHIVSYAKPGAVVGI-SGILSEQL 189 (222)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~------------~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~ 189 (222)
.....|+++...|.. ......+.+...|++|..++. ++......
T Consensus 80 -----------------------d~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt 136 (431)
T 3ojo_A 80 -----------------------TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTM 136 (431)
T ss_dssp -----------------------SCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHH
T ss_pred -----------------------chhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHH
Confidence 112478888743332 145567888999999987665 57777777
Q ss_pred HHHHHHHHh
Q 047371 190 PRIINRYSE 198 (222)
Q Consensus 190 ~~~~~~~~~ 198 (222)
+++.+.+.+
T Consensus 137 ~~v~~~i~e 145 (431)
T 3ojo_A 137 DDFVKPVIE 145 (431)
T ss_dssp HHTHHHHHH
T ss_pred HHHHHHHHH
Confidence 777665433
No 416
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.37 E-value=4.1 Score=32.37 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=49.8
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.++..++...+.+...+.. ..+.....|.... +....+++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~-----~~~~~~~~ 81 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEG-ANVLINGRREENVNETIKEIRAQYPD-AILQPVVADLGTE-----QGCQDVIE 81 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHCTT-CEEEEEECCTTSH-----HHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEecCCCCH-----HHHHHHHH
Confidence 4677888886654 2344455555 68999999998887776666543321 2455666665432 11111211
Q ss_pred ccccccccCCCCCCCeeEEEeccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANIL 158 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~ 158 (222)
..++.|+++.|..
T Consensus 82 -----------~~g~id~lv~nAg 94 (267)
T 3t4x_A 82 -----------KYPKVDILINNLG 94 (267)
T ss_dssp -----------HCCCCSEEEECCC
T ss_pred -----------hcCCCCEEEECCC
Confidence 2356899998764
No 417
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=88.18 E-value=3.8 Score=35.15 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=30.6
Q ss_pred CcEEEEccCCCHHHHHHHHh--------CCCEEEEEeCChHHHHHHHHHH
Q 047371 60 ELFLDYGTGSGILGIAAIKF--------GAAMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~--------~~~~v~gvD~s~~~l~~a~~~~ 101 (222)
-.|+|+|+|.|.++.-+.+. ...+++.+|+|+...+.=++++
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 36999999999987755431 2348999999997776444444
No 418
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=88.09 E-value=2.5 Score=33.80 Aligned_cols=108 Identities=10% Similarity=0.004 Sum_probs=60.8
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEE-eCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGV-DIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++++|-.|++.| .++..+++.+ .+|+.+ ..++...+...+.+...+ .++.+...|..... ..........
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G-~~Vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~-~v~~~~~~~~ 100 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDG-FTVVINYAGKAAAAEEVAGKIEAAG---GKALTAQADVSDPA-AVRRLFATAE 100 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHT-CEEEEEESSCSHHHHHHHHHHHHTT---CCEEEEECCTTCHH-HHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHH-HHHHHHHHHH
Confidence 5788998887766 2455566666 466666 455666666555554443 25667777765431 0111111110
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-----------H-----------HHHHHHHHHcccCCeEEEE
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-----------L-----------PQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~-----------~~~l~~~~~~LkpgG~l~~ 181 (222)
+ ..++.|+++.|..... . -.+++.+...++.+|.++.
T Consensus 101 ~-----------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 159 (267)
T 3u5t_A 101 E-----------AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIIN 159 (267)
T ss_dssp H-----------HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred H-----------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 0 2347899998765321 0 1235677777777888776
No 419
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.04 E-value=4.2 Score=32.92 Aligned_cols=108 Identities=19% Similarity=0.130 Sum_probs=60.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHH-HHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQV-IKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.+... .+...+.....+ .++.+...|..... ..........
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~-~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEG-ANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSDEQ-HCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTSHH-HHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCCHH-HHHHHHHHHH
Confidence 4778888887665 2444455565 689999988653 344444443333 35667777765431 0111111110
Q ss_pred hccccccccCCCCCCCeeEEEecccccc-----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP-----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
+ ..+++|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 121 ~-----------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 121 R-----------QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp H-----------HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred H-----------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 0 2346899998743210 11246777778888888776
No 420
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.92 E-value=5.9 Score=28.50 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=54.9
Q ss_pred CCcEEEEccCCCHHHHHHH----HhCCCEEEEEeCC-hHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 59 GELFLDYGTGSGILGIAAI----KFGAAMFVGVDID-PQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la----~~~~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..+++-+|+ |.++..++ +.+ .+|+++|.+ +...+...... . ..+.+..+|..... .+...
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~~-~-----~~~~~i~gd~~~~~-----~l~~a- 67 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL-G-----DNADVIPGDSNDSS-----VLKKA- 67 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH-C-----TTCEEEESCTTSHH-----HHHHH-
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCC-CCEEEEECCChHHHHHHHHhh-c-----CCCeEEEcCCCCHH-----HHHHc-
Confidence 456777775 55555444 334 579999997 45444443321 1 13456677664331 11111
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
....+|++++...-+.....+....+.+.|...++..
T Consensus 68 ------------~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 68 ------------GIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp ------------TTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred ------------ChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 2456899998655544445566666777777777664
No 421
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=87.89 E-value=2 Score=36.29 Aligned_cols=98 Identities=7% Similarity=0.088 Sum_probs=59.1
Q ss_pred cCCCcEEEEccC--CCHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 57 KGGELFLDYGTG--SGILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 57 ~~~~~vLD~G~G--~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++|++||-.|++ .|..+..+++....+++++. ++..++.+++ .|.. ..+...+ ..+. +.+...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~-~~~~----~~v~~~-- 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAE---EVFDYRA-PNLA----QTIRTY-- 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTS-TTHH----HHHHHH--
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCc---EEEECCC-chHH----HHHHHH--
Confidence 678999999984 46777777775445888885 7877776654 3432 1121111 1110 111111
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcc-cCCeEEEEec
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYA-KPGAVVGISG 183 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~ 183 (222)
..+.+|+++-...- ...++.+.+.| +++|.++..+
T Consensus 228 -----------t~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 228 -----------TKNNLRYALDCITN---VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp -----------TTTCCCEEEESSCS---HHHHHHHHHHSCTTCEEEEESS
T ss_pred -----------ccCCccEEEECCCc---hHHHHHHHHHhhcCCCEEEEEe
Confidence 23359999965432 35677777888 6999988754
No 422
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.74 E-value=4.4 Score=35.36 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=65.8
Q ss_pred CcEEEEccCC-C-HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCC-------------CCceeEEecCCcccccc
Q 047371 60 ELFLDYGTGS-G-ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIG-------------PKKIKLHLVPDRTFTAS 124 (222)
Q Consensus 60 ~~vLD~G~G~-G-~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~ 124 (222)
++|.-+|+|. | .++..+++.+ .+|+++|.++..++..++.. .... ..++.+. .+...
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G-~~V~~~D~~~~~v~~l~~g~--~~i~e~gl~~~l~~~~~~~~l~~t-~d~~e---- 74 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG-ANVRCIDTDRNKIEQLNSGT--IPIYEPGLEKMIARNVKAGRLRFG-TEIEQ---- 74 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTC--SCCCSTTHHHHHHHHHHTTSEEEE-SCHHH----
T ss_pred CEEEEECcCHHHHHHHHHHHhcC-CEEEEEECCHHHHHHHHcCC--CcccCCCHHHHHHhhcccCcEEEE-CCHHH----
Confidence 3577777765 3 2344455555 48999999999887766521 1100 0011111 00000
Q ss_pred cccccccchhccccccccCCCCCCCeeEEEeccccc----------cHHHHHHHHHHcccCCeEEEE-ecCCCCcHHHHH
Q 047371 125 MNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN----------PLPQLADHIVSYAKPGAVVGI-SGILSEQLPRII 193 (222)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~----------~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~ 193 (222)
.....|+|+...+.. .....++.+...+++|..++. +++.....+++.
T Consensus 75 ---------------------a~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~ 133 (450)
T 3gg2_A 75 ---------------------AVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIR 133 (450)
T ss_dssp ---------------------HGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHH
T ss_pred ---------------------HHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHH
Confidence 023478888765443 567788899999999877665 455666667776
Q ss_pred HHHHhh
Q 047371 194 NRYSEF 199 (222)
Q Consensus 194 ~~~~~~ 199 (222)
+.+.+.
T Consensus 134 ~~l~~~ 139 (450)
T 3gg2_A 134 KAIQEE 139 (450)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666553
No 423
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=87.45 E-value=5.5 Score=31.56 Aligned_cols=61 Identities=11% Similarity=-0.014 Sum_probs=41.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh-cCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL-NNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+.. .+- .++.+...|....
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAG-AAVAFCARDGERLRAAESALRQRFPG--ARLFASVCDVLDA 71 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTT--CCEEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCC--ceEEEEeCCCCCH
Confidence 4778888887765 2444555566 5799999999888877766654 221 2466777776543
No 424
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.39 E-value=3.7 Score=32.86 Aligned_cols=60 Identities=10% Similarity=-0.050 Sum_probs=40.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+ .++.+...|....
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~ 65 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAG-AKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTDR 65 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCCH
Confidence 3667888887665 2444455565 689999999988888777665544 2566666776543
No 425
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.36 E-value=3.7 Score=33.30 Aligned_cols=108 Identities=15% Similarity=-0.008 Sum_probs=60.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC--hHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID--PQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.+ ....+...+.....+ .++.+...|...... +.......
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~-v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREG-ADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSDESF-ARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTSHHH-HHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCCHHH-HHHHHHHH
Confidence 4778888887655 2344455555 578888886 334444444444433 256666666644310 01111111
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc-----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP-----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
.+ ..+++|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 123 ~~-----------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 123 RE-----------ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp HH-----------HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HH-----------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 00 1346899998754311 11246777788888888776
No 426
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.34 E-value=4.8 Score=32.64 Aligned_cols=107 Identities=13% Similarity=0.035 Sum_probs=61.7
Q ss_pred CCCcEEEEccCC--C---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 58 GGELFLDYGTGS--G---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 58 ~~~~vLD~G~G~--G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++++|-.|+++ | .++..+++.+ .+|+.++.++...+.+.+.....+ .+.+...|..... .+.......
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~-~v~~~~~~~ 102 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQG-AEVALTYLSETFKKRVDPLAESLG----VKLTVPCDVSDAE-SVDNMFKVL 102 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHHT----CCEEEECCTTCHH-HHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcC----CeEEEEcCCCCHH-HHHHHHHHH
Confidence 478899998864 3 2444555666 579999999866555555444333 3456666664431 011111111
Q ss_pred hhccccccccCCCCCCCeeEEEecccccc--------------------------HHHHHHHHHHcccCCeEEEE
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNP--------------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
.+ ..+++|+++.|..+.. ...+.+.+...++.+|.++.
T Consensus 103 ~~-----------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~ 166 (296)
T 3k31_A 103 AE-----------EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILT 166 (296)
T ss_dssp HH-----------HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred HH-----------HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 00 1256899998765321 11245677777778888776
No 427
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.25 E-value=1.9 Score=34.38 Aligned_cols=107 Identities=10% Similarity=-0.018 Sum_probs=58.0
Q ss_pred CCCcEEEEccCCCHHHHH----HHHhCCCEEEEEeCCh---HHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccc
Q 047371 58 GGELFLDYGTGSGILGIA----AIKFGAAMFVGVDIDP---QVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVD 130 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~----la~~~~~~v~gvD~s~---~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (222)
.++++|-.|++.| ++.. +++.+ .+|+.++.+. ..++...+.+...+ .++.+...|..... .+.....
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~-~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALES-VNLVLHYHQAKDSDTANKLKDELEDQG---AKVALYQSDLSNEE-EVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSS-CEEEEEESCGGGHHHHHHHHHHHHTTT---CEEEEEECCCCSHH-HHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCC-CEEEEEecCccCHHHHHHHHHHHHhcC---CcEEEEECCCCCHH-HHHHHHH
Confidence 4678888887655 4443 44445 5788887654 34444444444333 36777777765431 0111111
Q ss_pred cchhccccccccCCCCCCCeeEEEecccccc-----------H-----------HHHHHHHHHcccCCeEEEE
Q 047371 131 GVVEYLSSHEIRGISETEEYDVVIANILLNP-----------L-----------PQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~-----------~-----------~~~l~~~~~~LkpgG~l~~ 181 (222)
...+ ..++.|+++.|..... . -.+.+.+...++++|.++.
T Consensus 84 ~~~~-----------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 145 (262)
T 3ksu_A 84 FAEK-----------EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIIT 145 (262)
T ss_dssp HHHH-----------HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHH-----------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEE
Confidence 1100 2357899998765321 0 1135666667777788776
No 428
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.86 E-value=1.6 Score=35.15 Aligned_cols=88 Identities=16% Similarity=0.073 Sum_probs=52.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++...+.+.+.+...+- .++.+...|..............+.+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNSNH--ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTC--CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 4678888887655 2344455555 5899999999888877776654432 36777777765431011111111100
Q ss_pred ccccccccCCCCCCCeeEEEecccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANILL 159 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~ 159 (222)
..+++|+++.|...
T Consensus 88 -----------~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 88 -----------HFGKLDILVNNAGV 101 (311)
T ss_dssp -----------HHSSCCEEEECCCC
T ss_pred -----------hCCCCCEEEECCcc
Confidence 13478999998764
No 429
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.84 E-value=4.1 Score=32.46 Aligned_cols=108 Identities=15% Similarity=0.114 Sum_probs=61.0
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeC-ChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDI-DPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++++|-.|++.|. ++..+++.+ .+|+.++. +...++...+.+...+ .++.+...|..... .+........
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~-~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLG-AKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVP-EIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHH-HHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHH-HHHHHHHHHH
Confidence 46788888876652 444555566 57887776 4555665555555443 35667777765431 0111111110
Q ss_pred hccccccccCCCCCCCeeEEEecccccc----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
+ ..++.|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 92 ~-----------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 92 A-----------HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp H-----------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred H-----------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 0 1246899998754321 11245777778888888776
No 430
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.57 E-value=5.6 Score=31.78 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=60.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC-hHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID-PQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.. ....+...+.+...+ .++.+...|...... +........
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~-v~~~~~~~~ 104 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEG-AAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADNRDAEA-IEQAIRETV 104 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHH-HHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHH-HHHHHHHHH
Confidence 5788998887765 2444555666 578887654 455555555554433 256677777654310 111111110
Q ss_pred hccccccccCCCCCCCeeEEEecccccc----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNP----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
+ ..++.|+++.|..... .-.+.+.+...++.+|.++.
T Consensus 105 ~-----------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~ 163 (271)
T 3v2g_A 105 E-----------ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIIT 163 (271)
T ss_dssp H-----------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred H-----------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEE
Confidence 0 2346899998764311 11245777777887888776
No 431
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=86.21 E-value=5.4 Score=34.76 Aligned_cols=44 Identities=16% Similarity=0.391 Sum_probs=33.1
Q ss_pred CCcEEEEccCCCHHHHHHHH----hC--CCEEEEEeCChHHHHHHHHHHH
Q 047371 59 GELFLDYGTGSGILGIAAIK----FG--AAMFVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la~----~~--~~~v~gvD~s~~~l~~a~~~~~ 102 (222)
.-.|+|+|+|+|.++.-+.+ .+ ..+++.+|+|+...+.=++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 46899999999987775543 22 3589999999987766666654
No 432
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.04 E-value=4.5 Score=32.36 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=39.8
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeC-------------ChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDI-------------DPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+++|. ++..++.+.+.+...+ .++.+...|....
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEG-ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG---RKALTRVLDVRDD 89 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEEcCCCCH
Confidence 5788888887765 2444555666 68999998 6777777666655444 3566777776543
No 433
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.75 E-value=3.2 Score=33.32 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=40.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+ .++.+...|....
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 94 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAG-AHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSEA 94 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTST
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCCH
Confidence 5788888887655 2444455566 589999999888777766665544 3566777776543
No 434
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.69 E-value=8.5 Score=29.92 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=47.7
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
+++++|-.|++.| .++..+++.+ .+|+.++.++..++...+.+. .++.+...|..... ....+++
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~-----~~~~~~~ 80 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLG-SKVIISGSNEEKLKSLGNALK------DNYTIEVCNLANKE-----ECSNLIS 80 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHC------SSEEEEECCTTSHH-----HHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhc------cCccEEEcCCCCHH-----HHHHHHH
Confidence 5778888877655 2344455555 689999999988776655432 25666666664431 1111111
Q ss_pred ccccccccCCCCCCCeeEEEecccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANILL 159 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~ 159 (222)
..++.|+++.|...
T Consensus 81 -----------~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 81 -----------KTSNLDILVCNAGI 94 (249)
T ss_dssp -----------TCSCCSEEEECCC-
T ss_pred -----------hcCCCCEEEECCCC
Confidence 23568999987653
No 435
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=85.68 E-value=6.7 Score=30.79 Aligned_cols=58 Identities=9% Similarity=0.192 Sum_probs=38.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD 118 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~ 118 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+- .++.+...|.
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYG-ATVILLGRNEEKLRQVASHINEETG--RQPQWFILDL 71 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHS--CCCEEEECCT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcC--CCceEEEEec
Confidence 4778888887665 2444455566 5899999999888877666554332 1455666665
No 436
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.67 E-value=4.6 Score=32.21 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=38.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC------------hHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID------------PQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.+ +..++...+.+...+ .++.+...|....
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADG-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVRDR 86 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCCCH
Confidence 4778888887665 2444555565 689999987 666666655554443 3677777777543
No 437
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=85.64 E-value=4.4 Score=32.43 Aligned_cols=59 Identities=10% Similarity=0.139 Sum_probs=39.3
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++..++.....+...+. ++.+...|...
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d 88 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRG-AMVIGTATTEAGAEGIGAAFKQAGL---EGRGAVLNVND 88 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHTC---CCEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEEeCCC
Confidence 4677887776655 2344455565 5899999999888877766655443 45566666644
No 438
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=85.54 E-value=7 Score=31.66 Aligned_cols=60 Identities=20% Similarity=0.304 Sum_probs=39.5
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeCC------------hHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDID------------PQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.|. ++..+++.+ .+|+.+|.+ +..++.+...+...+ .++.+...|....
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREG-ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---RRIIASQVDVRDF 101 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecccccccccccccCHHHHHHHHHHHHhcC---CceEEEECCCCCH
Confidence 47788888877662 444555565 689999987 666666655554443 3567777776543
No 439
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.44 E-value=4.3 Score=32.12 Aligned_cols=108 Identities=10% Similarity=-0.019 Sum_probs=61.6
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEE-eCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGV-DIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
.++++|-.|++.| .++..+++.+ .+|+.+ +.++...+.+.+.+...+ .++.+...|..... .+........
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~-~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEG-ANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTNAA-EVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTCHH-HHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHH-HHHHHHHHHH
Confidence 4788888887765 2444555666 567776 777777766666555443 25667777765431 0111111110
Q ss_pred hccccccccCCCCCCCeeEEEeccccc-c----------------------HHHHHHHHHHcccCCeEEEE
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLN-P----------------------LPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~-~----------------------~~~~l~~~~~~LkpgG~l~~ 181 (222)
+ ..++.|+++.|.... . .-.+.+.+...++++|.++.
T Consensus 82 ~-----------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 141 (259)
T 3edm_A 82 D-----------KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVT 141 (259)
T ss_dssp H-----------HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred H-----------HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 0 124689999876422 0 11245667777777777766
No 440
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=85.42 E-value=4.9 Score=31.52 Aligned_cols=59 Identities=19% Similarity=0.134 Sum_probs=37.7
Q ss_pred CCCcEEEEccCCCHHHHH----HHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSGILGIA----AIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~----la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
+++++|-.|+ +|.++.. +++ .+ .+|++++.++..++...+.+...+ .++.+...|....
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g-~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~ 66 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDL 66 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcC-CeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCH
Confidence 4667787764 4555444 444 44 689999999887776666555433 2566777776543
No 441
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.34 E-value=2.3 Score=34.18 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=40.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++..++.+.+.+...+ .++.+...|....
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAAG---HDVDGSSCDVTST 85 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTT---CCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCH
Confidence 4778898887665 2444555565 679999999988887777665444 3577777776543
No 442
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.31 E-value=6.6 Score=31.50 Aligned_cols=57 Identities=18% Similarity=0.164 Sum_probs=38.7
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.++..++.+.+.+ + .++.+...|....
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d~ 87 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEG-CHVLCADIDGDAADAAATKI---G---CGAAACRVDVSDE 87 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHH---C---SSCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHc---C---CcceEEEecCCCH
Confidence 4778888887776 2455566666 58999999988777665543 2 2556666776543
No 443
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.30 E-value=4 Score=32.39 Aligned_cols=60 Identities=10% Similarity=0.034 Sum_probs=43.2
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.|. ++..+++.+ .+|+.++.++..++.+.+.+...+ .++.+...|....
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQG-ADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITDD 72 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCH
Confidence 47889999887762 455566666 589999999988888777665544 3567777776543
No 444
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=85.03 E-value=5.4 Score=31.81 Aligned_cols=60 Identities=23% Similarity=0.356 Sum_probs=39.2
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeC-------------ChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDI-------------DPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|. +...++...+.+...+ .++.+...|....
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEG-ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAVVDTRDF 85 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCCH
Confidence 4778888887765 2444555666 58999998 5666666655554433 3566777776543
No 445
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.00 E-value=1.3 Score=36.95 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=53.5
Q ss_pred hcCCCcEEEEccCC--CHHHHHHHHh-CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 56 IKGGELFLDYGTGS--GILGIAAIKF-GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 56 ~~~~~~vLD~G~G~--G~~~~~la~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
+++|++||-.|++. |..+..+++. +...|++++ ++...+.++ .+.. . .+. ....+. +.....
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~--~-~~~--~~~~~~----~~~~~~ 204 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT--H-LFD--RNADYV----QEVKRI 204 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS--E-EEE--TTSCHH----HHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc--E-EEc--CCccHH----HHHHHh
Confidence 56899999999842 5666666664 457899988 555444443 2322 1 121 111110 111111
Q ss_pred hhccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
..+.+|+++....- ..++.+.++|+++|.+++.+.
T Consensus 205 -------------~~~g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 205 -------------SAEGVDIVLDCLCG----DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp -------------CTTCEEEEEEECC-----------CTTEEEEEEEEEEC-
T ss_pred -------------cCCCceEEEECCCc----hhHHHHHHHhhcCCEEEEECC
Confidence 23579999965432 224678899999999998654
No 446
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.95 E-value=3.4 Score=33.22 Aligned_cols=60 Identities=15% Similarity=0.046 Sum_probs=41.0
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++...+.+...+ .++.+...|....
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~ 93 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAG-AQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVTQP 93 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCH
Confidence 5788888887765 2444555565 589999999988877776665544 2566677776543
No 447
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=84.90 E-value=6.4 Score=32.23 Aligned_cols=60 Identities=18% Similarity=0.268 Sum_probs=38.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC------------hHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID------------PQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+++|.+ +..++...+.+...+ .++.+...|....
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G-~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDG-ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG---RRIIARQADVRDL 119 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CeEEEEecccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCCH
Confidence 4778888887665 2444555565 689999886 566665555554443 3566777776543
No 448
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.80 E-value=7.5 Score=31.28 Aligned_cols=101 Identities=19% Similarity=0.151 Sum_probs=57.1
Q ss_pred CcEEEEccCC-C-HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccccccccc-ccccchhcc
Q 047371 60 ELFLDYGTGS-G-ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNE-RVDGVVEYL 136 (222)
Q Consensus 60 ~~vLD~G~G~-G-~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~ 136 (222)
++|.-+|+|. | .++..+++.+ .+|+.+|.++..++..++. ++. ..... ......... .....
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~----g~~-----~~~~~-~~~~~~~~~~~~~~~---- 68 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGG-NDVTLIDQWPAHIEAIRKN----GLI-----ADFNG-EEVVANLPIFSPEEI---- 68 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHH----CEE-----EEETT-EEEEECCCEECGGGC----
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHhC----CEE-----EEeCC-CeeEecceeecchhh----
Confidence 4688888875 3 2444555555 4899999999877766543 211 11000 000000000 00000
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
......+|+|+...+-.....+++.+...++++..++..
T Consensus 69 -------~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 69 -------DHQNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp -------CTTSCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred -------cccCCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEe
Confidence 001126899998776666778889999999988776654
No 449
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=84.73 E-value=5.5 Score=31.90 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=39.3
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC----------------hHHHHHHHHHHHhcCCCCCceeEEecCC
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID----------------PQVIKSAHQNAALNNIGPKKIKLHLVPD 118 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s----------------~~~l~~a~~~~~~~~~~~~~v~~~~~~~ 118 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.+ +..++.....+...+ .++.+...|.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 85 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEG-ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN---RRIVTAEVDV 85 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT---CCEEEEECCT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC---CceEEEEcCC
Confidence 4788898888776 2444555666 689999987 566666555544433 3577777776
Q ss_pred ccc
Q 047371 119 RTF 121 (222)
Q Consensus 119 ~~~ 121 (222)
...
T Consensus 86 ~~~ 88 (286)
T 3uve_A 86 RDY 88 (286)
T ss_dssp TCH
T ss_pred CCH
Confidence 543
No 450
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=84.54 E-value=3.8 Score=32.61 Aligned_cols=60 Identities=17% Similarity=0.061 Sum_probs=40.3
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh-cCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL-NNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+.. .+ .++.+...|....
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~~~ 82 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAG-ARLVLSGRDVSELDAARRALGEQFG---TDVHTVAIDLAEP 82 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTTST
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcC---CcEEEEEecCCCH
Confidence 4778888877665 2444555565 5899999999888877666543 23 2567777776543
No 451
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.42 E-value=5.5 Score=32.15 Aligned_cols=109 Identities=12% Similarity=0.110 Sum_probs=64.5
Q ss_pred CcEEEEccCC-C-HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhc---------CCCCC-------ceeEEecCCccc
Q 047371 60 ELFLDYGTGS-G-ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALN---------NIGPK-------KIKLHLVPDRTF 121 (222)
Q Consensus 60 ~~vLD~G~G~-G-~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~---------~~~~~-------~v~~~~~~~~~~ 121 (222)
++|.-+|+|+ | .++..++..+ .+|+..|.+++.++.+.+.+... ++... ++... .+...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~~- 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS-DDLAQ- 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE-SCHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe-CCHHH-
Confidence 4677788876 3 3455556666 48999999999998887654211 11100 01110 00000
Q ss_pred ccccccccccchhccccccccCCCCCCCeeEEEeccccc--cHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHH
Q 047371 122 TASMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN--PLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRY 196 (222)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 196 (222)
.....|+|+...+-. ....+++++...++|+..++..+. .-...++.+.+
T Consensus 82 ------------------------~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS-~~~~~~la~~~ 133 (283)
T 4e12_A 82 ------------------------AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSS-TLLPSDLVGYT 133 (283)
T ss_dssp ------------------------HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS-SSCHHHHHHHH
T ss_pred ------------------------HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCC-CCCHHHHHhhc
Confidence 124589999877665 456678889999999887664322 22344555544
No 452
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.10 E-value=5.8 Score=31.65 Aligned_cols=86 Identities=13% Similarity=0.094 Sum_probs=53.4
Q ss_pred cEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcccc
Q 047371 61 LFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSS 138 (222)
Q Consensus 61 ~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (222)
+|.-+|+|. |. ++..+.+.+ .+|+++|.++..++.+.+ .+.. . .. ..+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~~~~~~~~~~~~----~g~~-~--~~-~~~~~------------------- 53 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG-HYLIGVSRQQSTCEKAVE----RQLV-D--EA-GQDLS------------------- 53 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHH----TTSC-S--EE-ESCGG-------------------
T ss_pred EEEEEcCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHh----CCCC-c--cc-cCCHH-------------------
Confidence 466778775 32 344455555 489999999987766542 2321 0 01 11110
Q ss_pred ccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 139 HEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 139 ~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
. . ...|+|+...+-.....+++.+...++++..++.
T Consensus 54 ----~--~-~~~D~vi~av~~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 54 ----L--L-QTAKIIFLCTPIQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp ----G--G-TTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred ----H--h-CCCCEEEEECCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 0 2 4589999877766677788888888988876543
No 453
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=83.98 E-value=6 Score=31.81 Aligned_cols=61 Identities=18% Similarity=0.120 Sum_probs=38.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+- ..+.+...|....
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~ 95 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEG-YSVVITGRRPDVLDAAAGEIGGRTG--NIVRAVVCDVGDP 95 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCC--CeEEEEEcCCCCH
Confidence 4778888876654 2344455555 5899999999888777666544332 1346677776543
No 454
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=83.78 E-value=4 Score=32.18 Aligned_cols=63 Identities=13% Similarity=0.067 Sum_probs=41.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+....-...++.+...|....
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 71 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDG-YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC 71 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHT-CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH
Confidence 4678888887765 2445566666 5899999999888887766654321112566777776543
No 455
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=83.72 E-value=6.2 Score=27.51 Aligned_cols=36 Identities=22% Similarity=0.440 Sum_probs=23.2
Q ss_pred CCCcEEEEccCCCHHHHHHH----HhCCCEEEEEeCChHHHHH
Q 047371 58 GGELFLDYGTGSGILGIAAI----KFGAAMFVGVDIDPQVIKS 96 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la----~~~~~~v~gvD~s~~~l~~ 96 (222)
++++|+-+|+ |.++..++ +.+ .+++++|.++..++.
T Consensus 5 ~~~~v~I~G~--G~iG~~~a~~l~~~g-~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 5 KNKQFAVIGL--GRFGGSIVKELHRMG-HEVLAVDINEEKVNA 44 (144)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTT-CCCEEEESCHHHHHT
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH
Confidence 3567998887 54444433 344 579999998865543
No 456
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.69 E-value=3.1 Score=34.12 Aligned_cols=112 Identities=12% Similarity=0.028 Sum_probs=62.3
Q ss_pred CcEEEEccCCC--HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 60 ELFLDYGTGSG--ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 60 ~~vLD~G~G~G--~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
++|.-+|+|.= .++..|++.+ .+|+.++.++ .+.. ...++. ...... .+...........
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r~~--~~~i----~~~g~~-----~~~~~g-~~~~~~~~~~~~~----- 64 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSG-EDVHFLLRRD--YEAI----AGNGLK-----VFSING-DFTLPHVKGYRAP----- 64 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTS-CCEEEECSTT--HHHH----HHTCEE-----EEETTC-CEEESCCCEESCH-----
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CeEEEEEcCc--HHHH----HhCCCE-----EEcCCC-eEEEeeceeecCH-----
Confidence 46888999973 3555666665 4799999876 2332 223321 111100 0000000000000
Q ss_pred cccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHH
Q 047371 138 SHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRY 196 (222)
Q Consensus 138 ~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 196 (222)
.....+|+|+..-+.....+.++.+...++++..++.....-...+.+.+.+
T Consensus 65 -------~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~ 116 (312)
T 3hn2_A 65 -------EEIGPMDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLF 116 (312)
T ss_dssp -------HHHCCCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHT
T ss_pred -------HHcCCCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHC
Confidence 0123689999887777788899999999999987776544444444454444
No 457
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.66 E-value=11 Score=30.07 Aligned_cols=89 Identities=19% Similarity=0.164 Sum_probs=54.9
Q ss_pred cEEEEccCC-CH-HHHHHHHhCC-CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhccc
Q 047371 61 LFLDYGTGS-GI-LGIAAIKFGA-AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLS 137 (222)
Q Consensus 61 ~vLD~G~G~-G~-~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (222)
+|.-+|+|. |. ++..+++.+. .+|+++|.++..++.+++ .+.. . .. ..+...
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~--~-~~-~~~~~~----------------- 57 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGII--D-EG-TTSIAK----------------- 57 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSC--S-EE-ESCGGG-----------------
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCCc--c-cc-cCCHHH-----------------
Confidence 577788775 32 3444555552 379999999988776543 2321 0 01 111100
Q ss_pred cccccCCCCCC-CeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 138 SHEIRGISETE-EYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 138 ~~~~~~~~~~~-~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
... ..|+|+...+......++..+...++++..++..
T Consensus 58 --------~~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 58 --------VEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp --------GGGTCCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred --------HhcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 122 5799998777666777888888889998866653
No 458
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.58 E-value=7.7 Score=30.45 Aligned_cols=59 Identities=14% Similarity=-0.049 Sum_probs=36.6
Q ss_pred CCCcEEEEccC-CCHH----HHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTG-SGIL----GIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G-~G~~----~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
+++++|-.|++ +|.+ +..+++.+ .+|+.++.+....+.+++.....+ ++.+...|....
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~ 76 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREG-AELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVADD 76 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTTCH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcC-CCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCCCH
Confidence 57889999975 2433 44455555 589999988665555554443332 355666766543
No 459
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=83.54 E-value=1.2 Score=41.76 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=33.7
Q ss_pred CCcEEEEccCCCHHHHHHHHhC------CCEEEEEeCChHHHHHHHHHH
Q 047371 59 GELFLDYGTGSGILGIAAIKFG------AAMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la~~~------~~~v~gvD~s~~~l~~a~~~~ 101 (222)
..+|+|+.||.|.++.=+.+.+ ..-+.++|+++.+++..+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3589999999998776554432 457899999999988887764
No 460
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=83.51 E-value=1.2 Score=38.47 Aligned_cols=43 Identities=14% Similarity=-0.147 Sum_probs=34.8
Q ss_pred CcEEEEccCCCHHHHHHHHhC--CCE----EEEEeCChHHHHHHHHHHH
Q 047371 60 ELFLDYGTGSGILGIAAIKFG--AAM----FVGVDIDPQVIKSAHQNAA 102 (222)
Q Consensus 60 ~~vLD~G~G~G~~~~~la~~~--~~~----v~gvD~s~~~l~~a~~~~~ 102 (222)
.+|+|++||.|....-+.+.+ ..- +.++|+++.+++..+.+..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 489999999999888776654 334 8999999999888877764
No 461
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=83.12 E-value=3 Score=34.84 Aligned_cols=106 Identities=11% Similarity=0.053 Sum_probs=54.8
Q ss_pred hcCC-CcEEEEcc-CC-CHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecC--Ccccccccccccc
Q 047371 56 IKGG-ELFLDYGT-GS-GILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVP--DRTFTASMNERVD 130 (222)
Q Consensus 56 ~~~~-~~vLD~G~-G~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~ 130 (222)
+++| ++||-.|+ |. |..+..+++....+++++.-++..++..++.++..|.. .+ +...+ ...+ ..
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~--~v-i~~~~~~~~~~-------~~ 233 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT--QV-ITEDQNNSREF-------GP 233 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS--EE-EEHHHHHCGGG-------HH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe--EE-EecCccchHHH-------HH
Confidence 5678 99999987 33 66777777652357777765544321111122233432 11 11110 0011 00
Q ss_pred cchhccccccccCCC--CCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecC
Q 047371 131 GVVEYLSSHEIRGIS--ETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 131 ~~~~~~~~~~~~~~~--~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 184 (222)
.+ ..+. ..+.+|+++-...- .... .+.++|+++|.+++.+.
T Consensus 234 ~i---------~~~t~~~~~g~Dvvid~~G~---~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 234 TI---------KEWIKQSGGEAKLALNCVGG---KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HH---------HHHHHHHTCCEEEEEESSCH---HHHH-HHHHTSCTTCEEEECCC
T ss_pred HH---------HHHhhccCCCceEEEECCCc---hhHH-HHHHHhccCCEEEEecC
Confidence 00 0000 12469999975432 2233 66799999999988543
No 462
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.07 E-value=1.7 Score=38.58 Aligned_cols=91 Identities=23% Similarity=0.250 Sum_probs=55.1
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIK-FGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
..+|++|+-+|+|. |......++ .+ .+|+++|.++..++.|++ .+. .. .+...
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~----~Ga-----~~--~~l~e------------- 325 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMM----EGF-----DV--VTVEE------------- 325 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHH----TTC-----EE--CCHHH-------------
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH----cCC-----EE--ecHHH-------------
Confidence 45789999999865 433333333 45 589999999987766653 232 11 11110
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHHHH-HHHHHcccCCeEEEEecCCC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQLA-DHIVSYAKPGAVVGISGILS 186 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~~ 186 (222)
....+|+|+....... ++ ....+.+|+||+++..+...
T Consensus 326 ------------~l~~aDvVi~atgt~~---~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 326 ------------AIGDADIVVTATGNKD---IIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp ------------HGGGCSEEEECSSSSC---SBCHHHHHHSCTTCEEEECSSSG
T ss_pred ------------HHhCCCEEEECCCCHH---HHHHHHHHhcCCCcEEEEeCCCC
Confidence 0134799997644332 22 25566789999998865543
No 463
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=82.93 E-value=2.5 Score=38.09 Aligned_cols=60 Identities=15% Similarity=0.283 Sum_probs=43.4
Q ss_pred CCCCeeEEEeccc----cccHH----------HHHHHHHHcccCCeEEEEe--cCCCCcHHHHHHHHHhhhhccee
Q 047371 146 ETEEYDVVIANIL----LNPLP----------QLADHIVSYAKPGAVVGIS--GILSEQLPRIINRYSEFLEDILV 205 (222)
Q Consensus 146 ~~~~~D~v~~~~~----~~~~~----------~~l~~~~~~LkpgG~l~~~--~~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
..++||+|++|.. +||+. .+-..+.++|+|||.+++. +......+.+...+...|.....
T Consensus 218 ~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv 293 (670)
T 4gua_A 218 PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSA 293 (670)
T ss_dssp CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEE
T ss_pred CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeee
Confidence 4679999999864 34432 3567888999999999885 44566667888888777655543
No 464
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=82.82 E-value=0.98 Score=38.33 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=52.8
Q ss_pred CCCcEEEEccCCCHHHHHHH----HhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 58 GGELFLDYGTGSGILGIAAI----KFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
++++|+-+|+| .++..++ ..+ .+|+++|.++..++.+++.. +. .+.....+...+ ...
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~---g~---~~~~~~~~~~~l--------~~~- 226 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVF---GG---RVITLTATEANI--------KKS- 226 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHT---TT---SEEEEECCHHHH--------HHH-
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhc---Cc---eEEEecCCHHHH--------HHH-
Confidence 36789999985 4444333 345 48999999998877665432 21 221211111111 000
Q ss_pred hccccccccCCCCCCCeeEEEeccccccH-H-H-HHHHHHHcccCCeEEEEec
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPL-P-Q-LADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-~-~-~l~~~~~~LkpgG~l~~~~ 183 (222)
...+|+++.+.+.... . . +.+.+.+.+|+||.++...
T Consensus 227 -------------~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 227 -------------VQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -------------HHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred -------------HhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 1257999887654321 1 1 2466777889999887643
No 465
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.67 E-value=9.6 Score=29.95 Aligned_cols=57 Identities=19% Similarity=0.131 Sum_probs=36.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.++..++.....+ + .++.+...|....
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~ 66 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREG-ATVAIADIDIERARQAAAEI---G---PAAYAVQMDVTRQ 66 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH---C---TTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh---C---CCceEEEeeCCCH
Confidence 4778888886654 2344455555 58999999988776665543 1 2456666766543
No 466
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=82.51 E-value=6 Score=30.79 Aligned_cols=86 Identities=15% Similarity=0.143 Sum_probs=51.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++..++.....+...+ .++.+...|..... .+........
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~-~~~~~~~~~~- 77 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEKG---FKARGLVLNISDIE-SIQNFFAEIK- 77 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHH-HHHHHHHHHH-
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHH-HHHHHHHHHH-
Confidence 4677887776554 2344455555 689999999988888777666554 25667777765431 0111111110
Q ss_pred ccccccccCCCCCCCeeEEEecccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANILL 159 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~ 159 (222)
...+++|+++.|...
T Consensus 78 ----------~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 78 ----------AENLAIDILVNNAGI 92 (247)
T ss_dssp ----------HTTCCCSEEEECCCC
T ss_pred ----------HHcCCCCEEEECCCC
Confidence 034578999987653
No 467
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.42 E-value=7.9 Score=30.60 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=55.9
Q ss_pred CCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 59 GELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 59 ~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
+.+|.-+|+|. |. ++..+++.+...+..+|.++..++.+.+.. ++ .. ..+...
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~---g~-----~~-~~~~~~---------------- 64 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV---EA-----EY-TTDLAE---------------- 64 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT---TC-----EE-ESCGGG----------------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---CC-----ce-eCCHHH----------------
Confidence 45788899875 32 444555566544899999998776655432 22 11 111111
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
.....|+|+...+-....++++.+...++++..++.
T Consensus 65 ---------~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 65 ---------VNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp ---------SCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ---------HhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEE
Confidence 123579999876665567788888888888876655
No 468
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.37 E-value=4.1 Score=31.90 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=41.3
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.++..++...+.+...+ .++.+...|....
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREG-AAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSDP 70 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCCH
Confidence 4778888887655 2444555555 579999999998888777665443 3566777776543
No 469
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.05 E-value=4.4 Score=33.34 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=35.4
Q ss_pred CCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHH
Q 047371 148 EEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRY 196 (222)
Q Consensus 148 ~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 196 (222)
..+|+|+..-+.....+.++.+...++++..++.....-...+.+.+.+
T Consensus 70 ~~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~ 118 (320)
T 3i83_A 70 TKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAF 118 (320)
T ss_dssp SCCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHS
T ss_pred CCCCEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHC
Confidence 3689999877777777889999999999988776544444344554444
No 470
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.33 E-value=9.4 Score=30.01 Aligned_cols=60 Identities=17% Similarity=0.051 Sum_probs=40.0
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+...+...+ .++.+...|....
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 67 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEG-ARVVITGRTKEKLEEAKLEIEQFP---GQILTVQMDVRNT 67 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCST---TCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCH
Confidence 4677887776654 2344455555 589999999988888776654333 3567777776543
No 471
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=81.31 E-value=7.3 Score=31.11 Aligned_cols=60 Identities=15% Similarity=0.077 Sum_probs=39.2
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHh-cCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAAL-NNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.+...++.+...+.. .+ .++.+...|....
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHG-CHTVIASRSLPRVLTAARKLAGATG---RRCLPLSMDVRAP 89 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHHHS---SCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcC---CcEEEEEcCCCCH
Confidence 4788898887665 2344455555 5899999998877666555432 23 2566777776543
No 472
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=81.28 E-value=6.7 Score=32.64 Aligned_cols=99 Identities=8% Similarity=0.062 Sum_probs=52.6
Q ss_pred hcCCCcEEEEcc-C-CCHHHHHHHHh-CCCEEEEEeCChH---HHHHHHHHHHhcCCCCCceeEEecCCccccccccccc
Q 047371 56 IKGGELFLDYGT-G-SGILGIAAIKF-GAAMFVGVDIDPQ---VIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERV 129 (222)
Q Consensus 56 ~~~~~~vLD~G~-G-~G~~~~~la~~-~~~~v~gvD~s~~---~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (222)
+++|++||-.|+ | .|..+..+++. +...+..++.++. ..+.++ ..|.. .+ +...+. .. +.
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~--~v-i~~~~~-~~-----~~- 230 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE--HV-ITEEEL-RR-----PE- 230 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS--EE-EEHHHH-HS-----GG-
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc--EE-EecCcc-hH-----HH-
Confidence 678999999997 3 36777777764 6444555555432 233343 33432 11 111100 00 00
Q ss_pred ccchhccccccccCCCCC-CCeeEEEeccccccHHHHHHHHHHcccCCeEEEEec
Q 047371 130 DGVVEYLSSHEIRGISET-EEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISG 183 (222)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~-~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 183 (222)
+...... +.+|+++-...- .......++|+++|.+++.+
T Consensus 231 -----------~~~~~~~~~~~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 231 -----------MKNFFKDMPQPRLALNCVGG----KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp -----------GGGTTSSSCCCSEEEESSCH----HHHHHHHTTSCTTCEEEECC
T ss_pred -----------HHHHHhCCCCceEEEECCCc----HHHHHHHHhhCCCCEEEEEe
Confidence 0001111 248999865432 22245788999999998853
No 473
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=81.22 E-value=13 Score=29.15 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=35.9
Q ss_pred CCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 59 GELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 59 ~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
++++|-.|++.| .++..+++.+ .+|++++.++..++...+.+...+ .++.+...|...
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 62 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSD 62 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 456777776544 2333444555 589999999887776655554433 256666666654
No 474
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.17 E-value=4.3 Score=32.07 Aligned_cols=60 Identities=13% Similarity=0.025 Sum_probs=41.6
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.++..++...+.+...+ .++.+...|....
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAG-ASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTDE 73 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCH
Confidence 4778888887765 2444555666 579999999988887777665544 3566777776543
No 475
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.92 E-value=3.9 Score=32.35 Aligned_cols=60 Identities=13% Similarity=0.140 Sum_probs=40.6
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++...+.+...+ .++.+...|....
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLSHS 90 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCCCH
Confidence 4678888886654 2333444555 579999999998888777665544 3677777776543
No 476
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.85 E-value=13 Score=28.77 Aligned_cols=94 Identities=6% Similarity=-0.042 Sum_probs=54.9
Q ss_pred CCCcEEEEccCCCHHHHHHHHh---CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSGILGIAAIKF---GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~la~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
...+++-+|+ |.++..+++. ... |+++|.++..++.++ . .+.+..+|..... .+...
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~-----~~~~i~gd~~~~~-----~l~~a-- 67 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S-----GANFVHGDPTRVS-----DLEKA-- 67 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T-----TCEEEESCTTCHH-----HHHHT--
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c-----CCeEEEcCCCCHH-----HHHhc--
Confidence 3457887776 6777666643 123 999999998776554 1 2446667664331 00000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEe
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGIS 182 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 182 (222)
....+|.+++..+-+.....+....+.+.|+..++..
T Consensus 68 -----------~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 68 -----------NVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp -----------TCTTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred -----------CcchhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 2456898887655443334455566667787666653
No 477
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=80.76 E-value=9.8 Score=30.01 Aligned_cols=60 Identities=12% Similarity=-0.033 Sum_probs=38.0
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEE-eCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGV-DIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
+++++|-.|++.| .++..+++.+ .+|+.+ +.++..++...+.+...+ .++.+...|....
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G-~~vv~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 66 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENG-YNIVINYARSKKAALETAEEIEKLG---VKVLVVKANVGQP 66 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEECCTTCH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCH
Confidence 4677887776655 2344455566 466665 888887777766655443 2566777776543
No 478
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.75 E-value=11 Score=30.07 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=33.8
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHH-HHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQV-IKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++.. .+.+.+.+...+ .++.+...|...
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 90 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRG-CKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGV 90 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHHhC---CCeEEEEcCCCC
Confidence 4677887776654 2333444555 579999887643 444434343333 256666666644
No 479
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=80.50 E-value=8.5 Score=30.20 Aligned_cols=58 Identities=14% Similarity=-0.002 Sum_probs=35.9
Q ss_pred CCCcEEEEccCCCHHHHHH----HHhCCCEEEEEeC-ChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 58 GGELFLDYGTGSGILGIAA----IKFGAAMFVGVDI-DPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~l----a~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
.++++|-.|++ |.++..+ ++.+ .+|++++. ++..++...+.+...+ .++.+...|...
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~ 82 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISK 82 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 46778877754 5555444 4455 58999998 7777666555554433 256666777654
No 480
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.38 E-value=4.6 Score=32.55 Aligned_cols=60 Identities=12% Similarity=0.003 Sum_probs=40.7
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
+++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+ .++.+...|....
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADG-VTVGALGRTRTEVEEVADEIVGAG---GQAIALEADVSDE 89 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHTTTT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCH
Confidence 5778888887665 2444555565 589999999988877766654433 3566777776543
No 481
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.31 E-value=4.3 Score=32.20 Aligned_cols=61 Identities=11% Similarity=-0.033 Sum_probs=41.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+...+- .++.+...|....
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAG-ANVAVAGRSTADIDACVADLDQLGS--GKVIGVQTDVSDR 72 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTSS--SCEEEEECCTTSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCC--CcEEEEEcCCCCH
Confidence 4677888776655 2344455556 5899999999988877776654432 2677777776543
No 482
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=80.10 E-value=14 Score=29.28 Aligned_cols=60 Identities=15% Similarity=0.040 Sum_probs=37.9
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCC------------hHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDID------------PQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.+ ...++.....+...+ .++.+...|....
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 83 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAG-ADIAICDRCENSDVVGYPLATADDLAETVALVEKTG---RRCISAKVDVKDR 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCccccccccccccHHHHHHHHHHHHhcC---CeEEEEeCCCCCH
Confidence 4788888887765 2444555566 579999986 555555555444433 2566777776543
No 483
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.05 E-value=10 Score=29.99 Aligned_cols=56 Identities=20% Similarity=0.161 Sum_probs=35.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++.+.+.+. .++.+...|...
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~ 63 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREG-ASLVAVDREERLLAEAVAALE------AEAIAVVADVSD 63 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCC
Confidence 4677888876654 2334455555 589999999877665544321 256666676654
No 484
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=79.95 E-value=16 Score=29.94 Aligned_cols=92 Identities=7% Similarity=-0.035 Sum_probs=55.3
Q ss_pred CCcEEEEccCCCHHHHHHHHh---CCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhc
Q 047371 59 GELFLDYGTGSGILGIAAIKF---GAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEY 135 (222)
Q Consensus 59 ~~~vLD~G~G~G~~~~~la~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (222)
..+++-+|+ |..+..+++. ... ++++|.+++.++ ++. . .+.+..+|..... .+...
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~-----~~~~i~gd~~~~~-----~L~~a--- 173 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----S-----GANFVHGDPTRVS-----DLEKA--- 173 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----T-----TCEEEESCTTSHH-----HHHHT---
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----C-----CcEEEEeCCCCHH-----HHHhc---
Confidence 346777665 6777766642 224 999999998887 543 1 4557777775431 11111
Q ss_pred cccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 136 LSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 136 ~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
....+|.+++...-+...-......+.+.|...++.
T Consensus 174 ----------~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 174 ----------NVRGARAVIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp ----------CSTTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred ----------ChhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 355689888755443333345556667777766665
No 485
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=79.95 E-value=1.8 Score=36.65 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=29.4
Q ss_pred CCcEEEEccCC-CHHHHHHH-HhCCCEEEEEeCChHHHHHHHHHH
Q 047371 59 GELFLDYGTGS-GILGIAAI-KFGAAMFVGVDIDPQVIKSAHQNA 101 (222)
Q Consensus 59 ~~~vLD~G~G~-G~~~~~la-~~~~~~v~gvD~s~~~l~~a~~~~ 101 (222)
+++|+-+|+|. |.....++ ..+. +|+++|.++..++.+++..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLF 210 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhh
Confidence 47899999854 33333333 3464 8999999998888776543
No 486
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=79.90 E-value=8.6 Score=31.03 Aligned_cols=88 Identities=11% Similarity=0.148 Sum_probs=52.7
Q ss_pred CCCcEEEEccCCCH---HHHHHHHhCC--CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccc
Q 047371 58 GGELFLDYGTGSGI---LGIAAIKFGA--AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGV 132 (222)
Q Consensus 58 ~~~~vLD~G~G~G~---~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (222)
.++++|-.|++.|. ++..+++.+. .+|+.++.+...++.+.+.+....-. .++.+...|..... ....+
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~-----~v~~~ 105 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN-AKVHVAQLDITQAE-----KIKPF 105 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT-CEEEEEECCTTCGG-----GHHHH
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHH-----HHHHH
Confidence 58889999877652 3444555543 38999999999888877766543211 35667777765442 11111
Q ss_pred hhccccccccCCCCCCCeeEEEeccc
Q 047371 133 VEYLSSHEIRGISETEEYDVVIANIL 158 (222)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~D~v~~~~~ 158 (222)
++.- ....++.|+++.|..
T Consensus 106 ~~~~-------~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 106 IENL-------PQEFKDIDILVNNAG 124 (287)
T ss_dssp HHTS-------CGGGCSCCEEEECCC
T ss_pred HHHH-------HHhcCCCCEEEECCC
Confidence 1100 012357899998765
No 487
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=79.89 E-value=7.6 Score=32.68 Aligned_cols=101 Identities=9% Similarity=0.052 Sum_probs=59.6
Q ss_pred CCcEEEEccCC-C-HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 59 GELFLDYGTGS-G-ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 59 ~~~vLD~G~G~-G-~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
.++|.-+|+|. | .++..+++.+ .+|+..|.++..++..++.-. +......+.+ .+...+. .....
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~~r~~~~~~~i~~~~~-~~~~l~g~~l--~~~i~~t----~d~~e----- 95 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLWSYESDHVDEMQAEGV-NNRYLPNYPF--PETLKAY----CDLKA----- 95 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEECSCHHHHHHHHHHSS-BTTTBTTCCC--CTTEEEE----SCHHH-----
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHcCC-CcccCCCCcc--CCCeEEE----CCHHH-----
Confidence 45799999886 3 3455566665 479999999988776655311 0000001110 0000000 00000
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGI 181 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 181 (222)
.....|+|+...+.....++++.+...++++..++.
T Consensus 96 ---------a~~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 96 ---------SLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp ---------HHTTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ---------HHhcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 123579999887777788899999999999877665
No 488
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=79.87 E-value=12 Score=28.97 Aligned_cols=55 Identities=15% Similarity=0.054 Sum_probs=36.4
Q ss_pred CCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcc
Q 047371 59 GELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRT 120 (222)
Q Consensus 59 ~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~ 120 (222)
++++|-.|++.| .++..+++.+ .+|+.++.++..++.....+. .++.+...|...
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~ 60 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERG-HQVSMMGRRYQRLQQQELLLG------NAVIGIVADLAH 60 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHG------GGEEEEECCTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhc------CCceEEECCCCC
Confidence 567888887655 2444455555 589999999988877665542 145667777654
No 489
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=79.57 E-value=2.1 Score=35.84 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=58.0
Q ss_pred hcCCCcEEEEccCC-CHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccch
Q 047371 56 IKGGELFLDYGTGS-GILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVV 133 (222)
Q Consensus 56 ~~~~~~vLD~G~G~-G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (222)
+++|++||-.|+|. |..+..+++.- ..+|+++|.++..++.+++ .|.. . .+...+ . +. +....
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~-vi~~~~-~-~~----~~v~~-- 248 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGAD--H-VVDARR-D-PV----KQVME-- 248 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCS--E-EEETTS-C-HH----HHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCCC--E-EEeccc-h-HH----HHHHH--
Confidence 67899999999863 44555555532 3589999999988888764 2322 1 121111 1 10 00011
Q ss_pred hccccccccCCCCCCCeeEEEeccccccHHH--HHHHHHHcccCCeEEEEecC
Q 047371 134 EYLSSHEIRGISETEEYDVVIANILLNPLPQ--LADHIVSYAKPGAVVGISGI 184 (222)
Q Consensus 134 ~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~--~l~~~~~~LkpgG~l~~~~~ 184 (222)
+.....+|+++....- .. .++.+.++ ++|.+++.+.
T Consensus 249 ----------~~~g~g~Dvvid~~G~---~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 249 ----------LTRGRGVNVAMDFVGS---QATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp ----------HTTTCCEEEEEESSCC---HHHHHHGGGGEE--EEEEEEECCC
T ss_pred ----------HhCCCCCcEEEECCCC---chHHHHHHHhhc--CCCEEEEEeC
Confidence 1123369999975432 22 55556666 8999887654
No 490
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.34 E-value=21 Score=28.14 Aligned_cols=61 Identities=15% Similarity=0.039 Sum_probs=38.8
Q ss_pred CCCcEEEEccCCCHHHHH----HHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSGILGIA----AIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G~~~~~----la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++. .++.. +++.+ .+|++++.++..++...+.+...+.. .++.+...|....
T Consensus 31 ~~k~vlVTGasg-gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 31 RDRLALVTGASG-GIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNE 95 (279)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCC-CEEEEEECChHHHHHHHHHHHhcCCC-ceEEEEEecCCCH
Confidence 467788887554 44443 44455 68999999988877766655544432 2566666666543
No 491
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=79.15 E-value=7.9 Score=33.76 Aligned_cols=112 Identities=21% Similarity=0.159 Sum_probs=65.9
Q ss_pred CCcEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCC-------------CceeEEecCCccccc
Q 047371 59 GELFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGP-------------KKIKLHLVPDRTFTA 123 (222)
Q Consensus 59 ~~~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-------------~~v~~~~~~~~~~~~ 123 (222)
.-++-=+|+|. |. ++..+++.+ -+|+++|.++..++...+.. +.... .++.+. .+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D~~~~kv~~l~~g~--~~~~epgl~~~~~~~~~~g~l~~t-td~~---- 79 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVDKDARKIELLHQNV--MPIYEPGLDALVASNVKAGRLSFT-TDLA---- 79 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCSTTHHHHTTTC--CSSCCTTHHHHHHHHHHTTCEEEE-SCHH----
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHhcCC--CCccCCCHHHHHHhhcccCCEEEE-CCHH----
Confidence 34666666664 32 344555565 48999999998877765421 11100 011111 0000
Q ss_pred ccccccccchhccccccccCCCCCCCeeEEEeccccc-----------cHHHHHHHHHHcccCCeEEEE-ecCCCCcHHH
Q 047371 124 SMNERVDGVVEYLSSHEIRGISETEEYDVVIANILLN-----------PLPQLADHIVSYAKPGAVVGI-SGILSEQLPR 191 (222)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-----------~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 191 (222)
. .....|+++...+.. .....++.+...+++|..++. +++.....++
T Consensus 80 -------e--------------a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~ 138 (446)
T 4a7p_A 80 -------E--------------GVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDE 138 (446)
T ss_dssp -------H--------------HHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHH
T ss_pred -------H--------------HHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHH
Confidence 0 123468888753322 366778889999999887776 5677777777
Q ss_pred HHHHHHhh
Q 047371 192 IINRYSEF 199 (222)
Q Consensus 192 ~~~~~~~~ 199 (222)
+.+.+.+.
T Consensus 139 l~~~l~e~ 146 (446)
T 4a7p_A 139 VERIIAEV 146 (446)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77776654
No 492
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=78.89 E-value=6.6 Score=30.85 Aligned_cols=102 Identities=14% Similarity=0.176 Sum_probs=57.4
Q ss_pred CcEEEEccCC-C-HHHHHHHHhCC---CEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 60 ELFLDYGTGS-G-ILGIAAIKFGA---AMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 60 ~~vLD~G~G~-G-~~~~~la~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
++|.-+|+|. | .++..+.+.+. .+|++.|.++..++.+.+.. ++ .. ..+...
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g~-----~~-~~~~~e-------------- 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---GL-----TT-TTDNNE-------------- 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---CC-----EE-CSCHHH--------------
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---CC-----EE-eCChHH--------------
Confidence 3577788776 3 24445555543 37999999998877665432 22 11 011000
Q ss_pred ccccccccCCCCCCCeeEEEeccccccHHHHHHHHHHcccCCeEEEEecCCCCcHHHHHHHH
Q 047371 135 YLSSHEIRGISETEEYDVVIANILLNPLPQLADHIVSYAKPGAVVGISGILSEQLPRIINRY 196 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 196 (222)
.....|+|+...+-....++++.+...++++..++ +....-....+.+.+
T Consensus 60 -----------~~~~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv-s~~~gi~~~~l~~~~ 109 (247)
T 3gt0_A 60 -----------VAKNADILILSIKPDLYASIINEIKEIIKNDAIIV-TIAAGKSIESTENAF 109 (247)
T ss_dssp -----------HHHHCSEEEECSCTTTHHHHC---CCSSCTTCEEE-ECSCCSCHHHHHHHH
T ss_pred -----------HHHhCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE-EecCCCCHHHHHHHh
Confidence 01236888876666667778888888888876554 333444445555544
No 493
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=78.89 E-value=8.5 Score=30.87 Aligned_cols=60 Identities=15% Similarity=0.038 Sum_probs=37.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChH-------HHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQ-------VIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~-------~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++. .++.+.+.+...+ .++.+...|....
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~ 77 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADG-ANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIRDG 77 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCCCH
Confidence 4778888887765 2444455555 58999998875 3444444444333 2677777776543
No 494
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=78.82 E-value=13 Score=29.48 Aligned_cols=60 Identities=10% Similarity=-0.034 Sum_probs=37.8
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeC-ChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDI-DPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.++. +...++...+.+...+ .++.+...|....
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~ 90 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAG-AKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVSQE 90 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCCCH
Confidence 4778888876655 2444455565 57888888 6666666665555443 2566777776543
No 495
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=78.73 E-value=5.7 Score=30.84 Aligned_cols=58 Identities=14% Similarity=0.071 Sum_probs=38.8
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCC
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPD 118 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~ 118 (222)
.++++|-.|++.| .++..+++.+ .+|+.++.++..++...+.+...+.. +..+...+.
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHG-ASVVLLGRTEASLAEVSDQIKSAGQP--QPLIIALNL 73 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTSC--CCEEEECCT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEecCHHHHHHHHHHHHhcCCC--CceEEEecc
Confidence 4778888887654 2344455555 58999999999888887776655432 455555555
No 496
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=78.50 E-value=21 Score=28.31 Aligned_cols=100 Identities=12% Similarity=0.043 Sum_probs=59.8
Q ss_pred cEEEEccCC-CH-HHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcccc
Q 047371 61 LFLDYGTGS-GI-LGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYLSS 138 (222)
Q Consensus 61 ~vLD~G~G~-G~-~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (222)
+|.-+|+|. |. ++..+++ + .+|+++|.++..++.+.+. +.. ... ...
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g-~~V~~~~~~~~~~~~~~~~----g~~-----~~~--~~~------------------ 51 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-R-FPTLVWNRTFEKALRHQEE----FGS-----EAV--PLE------------------ 51 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-T-SCEEEECSSTHHHHHHHHH----HCC-----EEC--CGG------------------
T ss_pred eEEEEcccHHHHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHC----CCc-----ccC--HHH------------------
Confidence 577788887 43 4555666 5 4799999998877665442 221 111 111
Q ss_pred ccccCCCCCCCeeEEEeccccc-cHHHHHHHHHHcccCCeEEEEecCC-CCcHHHHHHHHHh
Q 047371 139 HEIRGISETEEYDVVIANILLN-PLPQLADHIVSYAKPGAVVGISGIL-SEQLPRIINRYSE 198 (222)
Q Consensus 139 ~~~~~~~~~~~~D~v~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~~~~~~~~~ 198 (222)
....+|+|+...+.. +...+++.+...+++|..++..... .....++.+.+..
T Consensus 52 -------~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~ 106 (289)
T 2cvz_A 52 -------RVAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLRE 106 (289)
T ss_dssp -------GGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHT
T ss_pred -------HHhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 123479999876644 3666778888888888766653222 2334455555543
No 497
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=78.38 E-value=16 Score=29.97 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=34.0
Q ss_pred CeeEEEeccccccHHHHHHHHHHcccCCeEEEE-ecCCCCcHHHHHHHHHh
Q 047371 149 EYDVVIANILLNPLPQLADHIVSYAKPGAVVGI-SGILSEQLPRIINRYSE 198 (222)
Q Consensus 149 ~~D~v~~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~~~~~ 198 (222)
..|+|+...+-....+.++.+...+++|..++- ++.......++.+.+.+
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~ 137 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIAT 137 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred cCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 479999877766666777888889999877664 33344455555555544
No 498
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=78.37 E-value=9.7 Score=30.52 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=48.5
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchh
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVE 134 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (222)
.++++|-.|++.| .++..+++.+ .+|++++.++...+.+.+.+ + .++.+...|..... .....++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dl~d~~-----~v~~~~~ 82 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRG-ATVIMAVRDTRKGEAAARTM---A---GQVEVRELDLQDLS-----SVRRFAD 82 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHTTS---S---SEEEEEECCTTCHH-----HHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh---c---CCeeEEEcCCCCHH-----HHHHHHH
Confidence 4778888887654 2344455555 68999999988776665433 1 36777777765441 1122211
Q ss_pred ccccccccCCCCCCCeeEEEecccc
Q 047371 135 YLSSHEIRGISETEEYDVVIANILL 159 (222)
Q Consensus 135 ~~~~~~~~~~~~~~~~D~v~~~~~~ 159 (222)
..++.|+++.|...
T Consensus 83 -----------~~~~iD~lv~nAg~ 96 (291)
T 3rd5_A 83 -----------GVSGADVLINNAGI 96 (291)
T ss_dssp -----------TCCCEEEEEECCCC
T ss_pred -----------hcCCCCEEEECCcC
Confidence 12578999987653
No 499
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=78.24 E-value=14 Score=29.57 Aligned_cols=88 Identities=14% Similarity=0.100 Sum_probs=55.2
Q ss_pred CcEEEEccCC-C-HHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCcccccccccccccchhcc
Q 047371 60 ELFLDYGTGS-G-ILGIAAIKFG-AAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTFTASMNERVDGVVEYL 136 (222)
Q Consensus 60 ~~vLD~G~G~-G-~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (222)
++|.=+|+|. | .++..+++.+ ..+|+++|.++..++.+.+ .+.. . ....+...
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~--~--~~~~~~~~---------------- 62 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIV--D--EATADFKV---------------- 62 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSC--S--EEESCTTT----------------
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCc--c--cccCCHHH----------------
Confidence 5688888886 3 3444555553 3589999999987776543 2321 0 11111110
Q ss_pred ccccccCCCCCCCeeEEEeccccccHHHHHHHHHHc-ccCCeEEE
Q 047371 137 SSHEIRGISETEEYDVVIANILLNPLPQLADHIVSY-AKPGAVVG 180 (222)
Q Consensus 137 ~~~~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~-LkpgG~l~ 180 (222)
.....|+|+...+......+++.+... ++++..++
T Consensus 63 ---------~~~~aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 63 ---------FAALADVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---------TGGGCSEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ---------hhcCCCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 123579999877766667788888888 88876555
No 500
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=78.22 E-value=18 Score=28.90 Aligned_cols=57 Identities=19% Similarity=0.107 Sum_probs=37.1
Q ss_pred CCCcEEEEccCCC---HHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHhcCCCCCceeEEecCCccc
Q 047371 58 GGELFLDYGTGSG---ILGIAAIKFGAAMFVGVDIDPQVIKSAHQNAALNNIGPKKIKLHLVPDRTF 121 (222)
Q Consensus 58 ~~~~vLD~G~G~G---~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~~~~~~ 121 (222)
.++++|-.|++.| .++..+++.+ .+|+.+|.++..++...... + .++.+...|....
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d~ 85 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNG-AYVVVADVNEDAAVRVANEI---G---SKAFGVRVDVSSA 85 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHH---C---TTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh---C---CceEEEEecCCCH
Confidence 4778888887665 2444555565 58999999987776655432 2 2566666766543
Done!